Citrus Sinensis ID: 024553

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260------
Protein Sequence
MADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINSQLACRDLSN
Secondary Structure (PSIPRED)
cHHHHHHcccccEEEEEcccccHHHHHHHHHHHHHHHcccccccccEEEEEcccccccccccccccHHHHHHHHcHHHHHHHHHHHHHHHcccccccEEEEccHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccEEEEEcccccccccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHcccccEEEEEEcHccHHHHHHHHHHHHHccccccccccccEEEEccccccccccccccccEHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcHHccccccccccHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccccEEcHHHHccHHHHHHHHHHHHHHHHHHcccHcccccEEEEEEccccccccEccccccccccccHHcccHHHHHHHHHHHHHHHHHHHcccccccc
Coil and Loop (DISEMBL)
maditsrnKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAgilatssrltpegydqMMSTNYIGAFFLTKLLlpllknspvpsrivNVTSFTHRNVFnaqvnnetitgkfflrskcypcariyEYSKLCLLIFSYELHRnlgldksrhvsviaadpgvvktnimrevpSFLSLMAFTVLKLLGllqspekgiNSVLdaalappetsgvyffggkgrtvnssalSFNSKLAGELWTTSCNLFINSQLACRDLSN
Flexible Loop (DISEMBL)
maditsrnkdarlEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFThrnvfnaqvnnetitgkffLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINSQLACRDLSN
Low Complexity Region (SEG)
MADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFltklllpllkNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINSQLACRDLSN
Disordered region (IsUnstruct)
**************AFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINSQLAC*****
Disordered Region (DISOPRED)
MADITS*NKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFIN**********
Disordered Region (DISEMBL)
MADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINSQLACRDLSN
Disordered Region (DISPRO)
MADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINSQL*******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINSQLACRDLSN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	266	2.2.26 [Sep-21-2011]
Q8N5I4	330	Dehydrogenase/reductase S	yes	no	0.868	0.7	0.325	4e-21
A2RVM0	322	Short-chain dehydrogenase	no	no	0.778	0.642	0.330	1e-18
Q6RVV4	316	Short-chain dehydrogenase	N/A	no	0.838	0.705	0.301	7e-15
Q8TC12	318	Retinol dehydrogenase 11	no	no	0.849	0.710	0.289	4e-14
Q8BYK4	316	Retinol dehydrogenase 12	yes	no	0.860	0.724	0.305	9e-14
P59837	316	Retinol dehydrogenase 12	no	no	0.860	0.724	0.290	2e-13
Q8NBN7	331	Retinol dehydrogenase 13	no	no	0.872	0.700	0.290	2e-12
O74959	339	Uncharacterized oxidoredu	yes	no	0.872	0.684	0.252	3e-12
Q91WL8	414	WW domain-containing oxid	no	no	0.725	0.466	0.306	6e-12
Q9QYF1	316	Retinol dehydrogenase 11	no	no	0.853	0.718	0.282	9e-12

>sp|Q8N5I4|DHRSX_HUMAN Dehydrogenase/reductase SDR family member on chromosome X OS=Homo sapiens GN=DHRSX PE=2 SV=2

 Score =  102 bits (253), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 136/261 (52%), Gaps = 30/261 (11%)

Query: 1   MADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS 60
           ++ I     + ++E    DL+S  S+ +F   +Q++ +       + +LINNAG++    
Sbjct: 84  VSKIKEETLNDKVEFLYCDLASMTSIRQF---VQKFKMKK---IPLHVLINNAGVMMVPQ 137

Query: 61  RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVP---SRIVNVTSFTHRNVFNAQVNNE 117
           R T +G+++    NY+G F LT LLL  LK S  P   +R+V V+S TH   + A++N +
Sbjct: 138 RKTRDGFEEHFGLNYLGHFLLTNLLLDTLKESGSPGHSARVVTVSSATH---YVAELNMD 194

Query: 118 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIM 177
            +       S CY     Y  SKL L++F+Y L R L  + S HV+    DPGVV T++ 
Sbjct: 195 DLQS-----SACYSPHAAYAQSKLALVLFTYHLQRLLAAEGS-HVTANVVDPGVVNTDVY 248

Query: 178 REVPSFLSLMAFTVLKLLG--LLQSPEKGINSVLDAALAPPETSGV---YFFGGKGRTVN 232
           + V     L      KLLG  L ++P++G  + + AA+  PE  GV   Y +  K     
Sbjct: 249 KHVFWATRLAK----KLLGWLLFKTPDEGAWTSIYAAVT-PELEGVGGHYLYNEK--ETK 301

Query: 233 SSALSFNSKLAGELWTTSCNL 253
           S  +++N KL  +LW+ SC +
Sbjct: 302 SLHVTYNQKLQQQLWSKSCEM 322

Homo sapiens (taxid: 9606)
EC: 1EC: .EC: 1EC: .EC: -EC: .EC: -

>sp|A2RVM0|TIC32_ARATH Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana GN=TIC32 PE=2 SV=1

 Score = 93.6 bits (231), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/227 (33%), Positives = 113/227 (49%), Gaps = 20/227 (8%)

Query: 3   DITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL 62
           DI  +   A+L+  ++DLSS QSV KF    +   L       + LLINNAGI+A    L
Sbjct: 72  DIVKQVPGAKLDVMELDLSSMQSVRKFASEYKSTGL------PLNLLINNAGIMACPFML 125

Query: 63  TPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPS----RIVNVTSFTHRNVFNAQVNNET 118
           + +  +   +TN++G F LTKLLL  +K++   S    RIVN++S  HR  +   V  + 
Sbjct: 126 SKDNIELQFATNHLGHFLLTKLLLDTMKSTSRESKREGRIVNLSSEAHRFSYPEGVRFDK 185

Query: 119 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMR 178
           I  K       Y   R Y  SKLC ++ + EL + L  D   +++  +  PG + TN+ R
Sbjct: 186 INDK-----SSYSSMRAYGQSKLCNVLHANELTKQLKED-GVNITANSLHPGAIMTNLGR 239

Query: 179 EVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP--PETSGVYF 223
               +L++    V K   +L+S  +G  +    AL P     SG YF
Sbjct: 240 YFNPYLAVAVGAVAKY--ILKSVPQGAATTCYVALNPQVAGVSGEYF 284

Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q6RVV4|TIC32_PEA Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum GN=TIC32 PE=1 SV=1

 Score = 81.3 bits (199), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 123/252 (48%), Gaps = 29/252 (11%)

Query: 11  ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSS---IQLLINNAGILATSSRLTPEGY 67
           A+++A ++DLSS  SV KF          S+ +SS   + +LINNAGI+A   +L+ +  
Sbjct: 81  AKVDAIELDLSSLDSVKKFA---------SEFNSSGRPLNILINNAGIMACPFKLSKDNI 131

Query: 68  DQMMSTNYIGAFFLTKLLLPLLKNSPVPS----RIVNVTSFTHRNVFNAQVNNETITGKF 123
           +   +TN+IG F LT LLL  +K +   S    RIVNV S  HR  +   +  + I  + 
Sbjct: 132 ELQFATNHIGHFLLTNLLLDTMKKTTRESKKEGRIVNVASEAHRFAYPEGIRFDKINDQ- 190

Query: 124 FLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF 183
                 Y   R Y  SKL  ++ + +L ++L  D   +++  +  PG + TN+ R   + 
Sbjct: 191 ----SSYNNWRAYGQSKLANVLHANQLTKHLKED-GVNITANSLHPGTIVTNLFRHNSAV 245

Query: 184 LSLMAFTVLKLLGLLQSPEKGINSVLDAALAP--PETSGVYFFGGKGRTVNSSALSFNSK 241
             L+   + KL  +L++ ++G  +    AL P     SG YF         ++    +  
Sbjct: 246 NGLIN-VIGKL--VLKNVQQGAATTCYVALHPQVKGVSGEYF--SDSNVYKTTPHGKDVD 300

Query: 242 LAGELWTTSCNL 253
           LA +LW  S NL
Sbjct: 301 LAKKLWDFSINL 312

Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62. Has a NADPH-dependent dehydrogenase activity, but only after preincubation with lipids.

Pisum sativum (taxid: 3888)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q8TC12|RDH11_HUMAN Retinol dehydrogenase 11 OS=Homo sapiens GN=RDH11 PE=1 SV=2

 Score = 79.0 bits (193), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 122/256 (47%), Gaps = 30/256 (11%)

Query: 3   DITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL 62
           +I +   + ++   ++DLS  +S+  F        L  + H  + +LINNAG++      
Sbjct: 84  EIQTTTGNQQVLVRKLDLSDTKSIRAFAKGF----LAEEKH--LHVLINNAGVMMCPYSK 137

Query: 63  TPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGK 122
           T +G++  +  N++G F LT LLL  LK S  PSRIVNV+S  H      +++   + G+
Sbjct: 138 TADGFEMHIGVNHLGHFLLTHLLLEKLKES-APSRIVNVSSLAHH---LGRIHFHNLQGE 193

Query: 123 FFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS 182
            F     Y     Y +SKL  ++F+ EL R L   K   V+  +  PG V++ ++R   S
Sbjct: 194 KF-----YNAGLAYCHSKLANILFTQELARRL---KGSGVTTYSVHPGTVQSELVRH-SS 244

Query: 183 FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKG----RTVNSSALSF 238
           F+  M +        +++P++G  + L  AL    T G+    G           SA + 
Sbjct: 245 FMRWMWWL---FSFFIKTPQQGAQTSLHCAL----TEGLEILSGNHFSDCHVAWVSAQAR 297

Query: 239 NSKLAGELWTTSCNLF 254
           N  +A  LW  SC+L 
Sbjct: 298 NETIARRLWDVSCDLL 313

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity towards 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: 0

>sp|Q8BYK4|RDH12_MOUSE Retinol dehydrogenase 12 OS=Mus musculus GN=Rdh12 PE=2 SV=1

 Score = 77.4 bits (189), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 125/255 (49%), Gaps = 26/255 (10%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSR 61
           ++I +  K++++   ++DLS  +S+  F +   ++L +      + +LINNAG++     
Sbjct: 81  SEIRADTKNSQVLVRKLDLSDTKSIRAFAE---RFLAEEK---KLHILINNAGVMMCPYS 134

Query: 62  LTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG 121
            T +G++     N++G F LT LLL  LK S  P+R+VN++S  H      ++    + G
Sbjct: 135 KTTDGFETHFGVNHLGHFLLTYLLLERLKES-APARVVNLSSIAH---LIGKIRFHDLQG 190

Query: 122 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 181
           +     K Y  A  Y +SKL  L+F+ EL + L   +   V+  A  PGVV + I R   
Sbjct: 191 Q-----KRYCSAFAYGHSKLANLLFTRELAKRL---QGTGVTAYAVHPGVVLSEITRN-- 240

Query: 182 SFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP--PETSGVYFFGGKGRTVNSSALSFN 239
           S+L  + + +       +S  +G  + L  ALA      SG YF   K   V+S A   N
Sbjct: 241 SYLLCLLWRLFS--PFFKSTSQGAQTSLHCALAEDLEPLSGKYFSDCKRMWVSSRAR--N 296

Query: 240 SKLAGELWTTSCNLF 254
            K A  LW  SC L 
Sbjct: 297 KKTAERLWNVSCELL 311

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity toward 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected. Might be the key enzyme in the formation of 11-cis-retinal from 11-cis-retinol during regeneration of the cone visual pigments.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|P59837|RDH12_BOVIN Retinol dehydrogenase 12 OS=Bos taurus GN=RDH12 PE=2 SV=1

 Score = 76.6 bits (187), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 124/255 (48%), Gaps = 26/255 (10%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSR 61
           ++I +  K++++   ++DLS  +S+  F +              + +LINNAG++     
Sbjct: 81  SEIQADTKNSQVLVRKLDLSDTKSIRAFAEGFLA------EEKQLHILINNAGVMLCPYS 134

Query: 62  LTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG 121
            T +G++  ++ N++G F LT LLL  LK S  P+R+VN++S  H      ++    + G
Sbjct: 135 KTADGFETHLAVNHLGHFLLTHLLLGRLKES-APARVVNLSSVAHH---LGKIRFHDLQG 190

Query: 122 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 181
                 K Y     Y +SKL  ++F+ EL + L   K   V+  A  PG+V++ ++R   
Sbjct: 191 -----DKYYNLGFAYCHSKLANVLFTRELAKRL---KGTGVTTYAVHPGIVRSKLVRH-- 240

Query: 182 SFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP--PETSGVYFFGGKGRTVNSSALSFN 239
           SFL  + + +      L++  +G  + L  ALA      SG YF   K   V+  A   N
Sbjct: 241 SFLLCLLWRLFS--PFLKTTWEGAQTSLHCALAEGLEPLSGKYFSDCKKTWVSPRAR--N 296

Query: 240 SKLAGELWTTSCNLF 254
           +K A  LW  SC L 
Sbjct: 297 NKTAERLWNVSCELL 311

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity toward 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected. Might be the key enzyme in the formation of 11-cis-retinal from 11-cis-retinol during regeneration of the cone visual pigments.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q8NBN7|RDH13_HUMAN Retinol dehydrogenase 13 OS=Homo sapiens GN=RDH13 PE=1 SV=2

 Score = 73.2 bits (178), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 117/255 (45%), Gaps = 23/255 (9%)

Query: 3   DITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL 62
           DI     +  + A  +DL+S +S+ +F   +       +    + +LINNAG++      
Sbjct: 81  DIRGETLNHHVNARHLDLASLKSIREFAAKI------IEEEERVDILINNAGVMRCPHWT 134

Query: 63  TPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGK 122
           T +G++     N++G F LT LLL  LK S  PSRI+N++S  H       V        
Sbjct: 135 TEDGFEMQFGVNHLGHFLLTNLLLDKLKAS-APSRIINLSSLAH-------VAGHIDFDD 186

Query: 123 FFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS 182
              +++ Y     Y  SKL +++F+ EL R L   +   V+V A  PGV +T + R    
Sbjct: 187 LNWQTRKYNTKAAYCQSKLAIVLFTKELSRRL---QGSGVTVNALHPGVARTELGRHTGI 243

Query: 183 FLSLMAFTVLKLLG--LLQSPEKGI--NSVLDAALAPPETSGVYFFGGKGRTVNSSALSF 238
             S  + T L  +   L++SPE     ++ L  A    + SG YF G K +     A   
Sbjct: 244 HGSTFSSTTLGPIFWLLVKSPELAAQPSTYLAVAEELADVSGKYFDGLKQKAPAPEA--E 301

Query: 239 NSKLAGELWTTSCNL 253
           + ++A  LW  S  L
Sbjct: 302 DEEVARRLWAESARL 316

Does not exhibit retinol dehydrogenase (RDH) activity in vitro.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|O74959|YJCD_SCHPO Uncharacterized oxidoreductase C736.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC736.13 PE=3 SV=1

 Score = 72.8 bits (177), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 119/269 (44%), Gaps = 37/269 (13%)

Query: 1   MADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS 60
           M  I    + +++   ++DL  F+SV +  +S             + +L+NNAGI+    
Sbjct: 83  MKQIHDEVRHSKIRFLRLDLLDFESVYQAAESFIA------KEEKLHILVNNAGIMNPPF 136

Query: 61  RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS-----PVPSRIVNVTSFT-----HRNVF 110
            LT +GY+  + TNY+  +  T+LLLP L+ +     P   RIV+V S       +  ++
Sbjct: 137 ELTKDGYELQIQTNYLSHYLFTELLLPTLRRTAEECRPGDVRIVHVASIAYLQAPYSGIY 196

Query: 111 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG 170
              +N   +    F R         Y  SK   +++S  L + L   +   +  ++  PG
Sbjct: 197 FPDLNLPHVLLGTFAR---------YGQSKYAQILYSIALAKRL---EKYGIYSVSLHPG 244

Query: 171 VVKTNIMREVPSF-LSLMAFTVLKLLGLLQSPEKGINSVLDAALAP----PETSGVYFFG 225
           V++T + R  P+F L L+  +V +   LL  P +G  + L AA +P       +G YF  
Sbjct: 245 VIRTELTRYSPTFALKLLEKSVFQY--LLLDPIRGAMTSLYAATSPEISKEHLNGAYFTA 302

Query: 226 GKGRTVNSSALSFNSKLAGELWTTSCNLF 254
              R +   A   +     EL+  +  +F
Sbjct: 303 IAQRGILHRA--HDDAFVEELYRYTHKIF 329

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q91WL8|WWOX_MOUSE WW domain-containing oxidoreductase OS=Mus musculus GN=Wwox PE=1 SV=1

 Score = 71.6 bits (174), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 113/222 (50%), Gaps = 29/222 (13%)

Query: 11  ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQM 70
           A++EA  +DL+  +SV  F ++ +        + S+ +L+ NAG  A    LT +G +  
Sbjct: 175 AKVEAMTLDLAVLRSVQHFAEAFKA------KNVSLHVLVCNAGTFALPWGLTKDGLETT 228

Query: 71  MSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFL----- 125
              N++G F+L +LL  +L  S  P+R++ V+S +HR      +N+   +GK  L     
Sbjct: 229 FQVNHLGHFYLVQLLQDVLCRSS-PARVIVVSSESHRFT---DINDS--SGKLDLSRLSP 282

Query: 126 -RSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG-VVKTNIMREVPSF 183
            RS  Y     Y  SKLC ++FS ELHR L     R V+  A  PG ++ + I R   S+
Sbjct: 283 PRSD-YWAMLAYNRSKLCNILFSNELHRRL---SPRGVTSNAVHPGNMMYSAIHRN--SW 336

Query: 184 LSLMAFTVLKLLGLLQSPEKGINSVLDAALAP--PETSGVYF 223
           +  + FT+ +     +S ++G  + +  A+AP      G+YF
Sbjct: 337 VYKLLFTLAR--PFTKSMQQGAATTVYCAVAPELEGLGGMYF 376

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. Inhibits Wnt signaling, probably by sequestering DVL2 in the cytoplasm (By similarity). May also play a role in tumor necrosis factor (TNF)-mediated cell death. Required for normal bone development.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9QYF1|RDH11_MOUSE Retinol dehydrogenase 11 OS=Mus musculus GN=Rdh11 PE=2 SV=2

 Score = 70.9 bits (172), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 122/255 (47%), Gaps = 28/255 (10%)

Query: 3   DITSRNKDARLEAFQVDLSSFQSVLKF-KDSLQQWLLDSDMHSSIQLLINNAGILATSSR 61
           +I +   ++++   ++DL+  +S+  F KD L +          + LLINNAG++     
Sbjct: 81  EIQAVTGNSQVFVRKLDLADTKSIRAFAKDFLAE-------EKHLHLLINNAGVMMCPYS 133

Query: 62  LTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG 121
            T +G++  +  N++G F LT LLL  LK S  PSRIVN++S  H      +++   + G
Sbjct: 134 KTADGFEMHIGVNHLGHFLLTHLLLEKLKES-APSRIVNLSSLGHH---LGRIHFHNLQG 189

Query: 122 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 181
           + F     Y     Y +SKL  ++F+ EL + L   K   V+  +  PG V + + R   
Sbjct: 190 EKF-----YSAGLAYCHSKLANILFTKELAKRL---KGSGVTTYSVHPGTVHSELTR--- 238

Query: 182 SFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP--PETSGVYFFGGKGRTVNSSALSFN 239
            + S+M +        +++P++G  + L  AL       SG +F   +   V  S    N
Sbjct: 239 -YSSIMRWLWQLFFVFIKTPQEGAQTSLYCALTEGLESLSGSHFSDCQLAWV--SYQGRN 295

Query: 240 SKLAGELWTTSCNLF 254
             +A  LW  SC+L 
Sbjct: 296 EIIARRLWDVSCDLL 310

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent all-trans-retinal reductase. Also involved in the metabolism of short-chain aldehydes.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: 0

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	266
296081791	369	unnamed protein product [Vitis vinifera]	0.977	0.704	0.747	1e-103
359476007	467	PREDICTED: dehydrogenase/reductase SDR f	0.977	0.556	0.747	1e-102
224061535	349	predicted protein [Populus trichocarpa]	0.966	0.736	0.732	2e-98
449463521	378	PREDICTED: dehydrogenase/reductase SDR f	0.977	0.687	0.689	3e-96
449481095	378	PREDICTED: dehydrogenase/reductase SDR f	0.977	0.687	0.681	4e-95
297806381	357	short-chain dehydrogenase/reductase fami	0.954	0.711	0.670	2e-93
255540331	369	short-chain dehydrogenase, putative [Ric	0.977	0.704	0.712	1e-91
42567629	359	Rossmann-fold NAD(P)-binding domain-cont	0.947	0.701	0.666	5e-91
356516031	387	PREDICTED: dehydrogenase/reductase SDR f	0.951	0.653	0.677	4e-89
9755640	346	putative protein [Arabidopsis thaliana]	0.973	0.748	0.642	3e-88

>gi|296081791|emb|CBI20796.3| unnamed protein product [Vitis vinifera]

 Score =  379 bits (972), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 195/261 (74%), Positives = 223/261 (85%), Gaps = 1/261 (0%)

Query: 1   MADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS 60
           M +I  +NK+A L+ FQVDLSSF S+LKFK SL+QWL DS+MHSSIQLLINNAGILATS 
Sbjct: 83  MVEIKEKNKNAHLKGFQVDLSSFHSILKFKGSLEQWLADSNMHSSIQLLINNAGILATSC 142

Query: 61  RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT 120
           RLT EG DQMM+TNY+GAF LTKLLLPLL++SPVPSRIVNV+SFTH NVF+ QV+  TIT
Sbjct: 143 RLTTEGCDQMMATNYMGAFSLTKLLLPLLRSSPVPSRIVNVSSFTHLNVFDMQVDEGTIT 202

Query: 121 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLG-LDKSRHVSVIAADPGVVKTNIMRE 179
           GK F R K YPCA IYEYSKLCLL+F+YELHR LG +  SRHVSVIA DPG V+TNIMRE
Sbjct: 203 GKCFSRPKQYPCAHIYEYSKLCLLLFAYELHRQLGCMHNSRHVSVIAVDPGAVETNIMRE 262

Query: 180 VPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFN 239
           VPS +S MAF VLKLL LLQSPE G++S+LDAALAPPE SG+YFFGGKGRTV SSALS+N
Sbjct: 263 VPSCISHMAFMVLKLLFLLQSPENGVSSILDAALAPPEISGLYFFGGKGRTVKSSALSYN 322

Query: 240 SKLAGELWTTSCNLFINSQLA 260
           +KLA +LWTTSC+LF+   LA
Sbjct: 323 TKLAEKLWTTSCDLFLKLCLA 343

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359476007|ref|XP_002280887.2| PREDICTED: dehydrogenase/reductase SDR family member on chromosome X-like [Vitis vinifera]

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 195/261 (74%), Positives = 223/261 (85%), Gaps = 1/261 (0%)

Query: 1   MADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS 60
           M +I  +NK+A L+ FQVDLSSF S+LKFK SL+QWL DS+MHSSIQLLINNAGILATS 
Sbjct: 104 MVEIKEKNKNAHLKGFQVDLSSFHSILKFKGSLEQWLADSNMHSSIQLLINNAGILATSC 163

Query: 61  RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT 120
           RLT EG DQMM+TNY+GAF LTKLLLPLL++SPVPSRIVNV+SFTH NVF+ QV+  TIT
Sbjct: 164 RLTTEGCDQMMATNYMGAFSLTKLLLPLLRSSPVPSRIVNVSSFTHLNVFDMQVDEGTIT 223

Query: 121 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLG-LDKSRHVSVIAADPGVVKTNIMRE 179
           GK F R K YPCA IYEYSKLCLL+F+YELHR LG +  SRHVSVIA DPG V+TNIMRE
Sbjct: 224 GKCFSRPKQYPCAHIYEYSKLCLLLFAYELHRQLGCMHNSRHVSVIAVDPGAVETNIMRE 283

Query: 180 VPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFN 239
           VPS +S MAF VLKLL LLQSPE G++S+LDAALAPPE SG+YFFGGKGRTV SSALS+N
Sbjct: 284 VPSCISHMAFMVLKLLFLLQSPENGVSSILDAALAPPEISGLYFFGGKGRTVKSSALSYN 343

Query: 240 SKLAGELWTTSCNLFINSQLA 260
           +KLA +LWTTSC+LF+   LA
Sbjct: 344 TKLAEKLWTTSCDLFLKLCLA 364

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224061535|ref|XP_002300528.1| predicted protein [Populus trichocarpa] gi|222847786|gb|EEE85333.1| predicted protein [Populus trichocarpa]

 Score =  364 bits (935), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 189/258 (73%), Positives = 219/258 (84%), Gaps = 1/258 (0%)

Query: 4   ITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLT 63
           I  +NKDA +EAF+VDLSSFQS+LKFKDSL++WLLDSDMH S+QLLINNAGILA S RLT
Sbjct: 85  IHKKNKDACVEAFEVDLSSFQSILKFKDSLEKWLLDSDMHVSVQLLINNAGILAASHRLT 144

Query: 64  PEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKF 123
            EGYDQMM TNYIGAF LTKLLLPLLKNSP+ SRIVNVTSFTHRN+FN Q++ ET+ GK 
Sbjct: 145 EEGYDQMMGTNYIGAFSLTKLLLPLLKNSPIGSRIVNVTSFTHRNLFNVQIDKETVVGKC 204

Query: 124 FLRSKCYPCARIYEYSKLCLLIFSYELHRNL-GLDKSRHVSVIAADPGVVKTNIMREVPS 182
             RSK YP + IYE+SKLCLL+FSYELHR L   D+S  VSVIAADPG V+TNIMRE+PS
Sbjct: 205 LSRSKQYPFSHIYEFSKLCLLMFSYELHRQLHSTDESCKVSVIAADPGAVETNIMRELPS 264

Query: 183 FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKL 242
           ++S M F  L LLGLLQSPE+G +SV+DAALAPPE SGVYFFGGKGRT+NSSALS N +L
Sbjct: 265 YISRMTFIALNLLGLLQSPEEGASSVIDAALAPPEISGVYFFGGKGRTLNSSALSHNIRL 324

Query: 243 AGELWTTSCNLFINSQLA 260
           A +LW +S +LF+ S+LA
Sbjct: 325 AEKLWRSSSDLFLESKLA 342

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449463521|ref|XP_004149482.1| PREDICTED: dehydrogenase/reductase SDR family member on chromosome X-like [Cucumis sativus]

 Score =  357 bits (916), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 180/261 (68%), Positives = 215/261 (82%), Gaps = 1/261 (0%)

Query: 1   MADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS 60
           M++I  +N+ A L+AFQVDL S QS+L FK+SLQ WL DS MH S+QLLINNAGILATSS
Sbjct: 111 MSEIKRQNEKALLKAFQVDLLSIQSILDFKNSLQLWLQDSKMHPSVQLLINNAGILATSS 170

Query: 61  RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT 120
           RLT EGYDQMM+TNY+G FFLT++LLPLLKNSP PSRIVNV+SFTHR VF+  V+ +T+ 
Sbjct: 171 RLTSEGYDQMMATNYVGPFFLTQMLLPLLKNSPFPSRIVNVSSFTHRCVFDVHVDEDTVC 230

Query: 121 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRH-VSVIAADPGVVKTNIMRE 179
           GK F     YPC+ IY+YSKLCLL+FSYELHR L LDK  H ++V  ADPGVVKTNIMRE
Sbjct: 231 GKGFWGLDQYPCSSIYQYSKLCLLLFSYELHRKLSLDKESHKLTVNVADPGVVKTNIMRE 290

Query: 180 VPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFN 239
           VP++LS +AFT+L+LL LLQ P+ G+NS+LDAALA PETSGVYFFGGKGR V SSA S +
Sbjct: 291 VPTYLSRVAFTILRLLRLLQLPKDGVNSILDAALASPETSGVYFFGGKGRRVGSSAQSND 350

Query: 240 SKLAGELWTTSCNLFINSQLA 260
           +KLA ELW TS NLF+ SQ++
Sbjct: 351 AKLAEELWETSSNLFVKSQIS 371

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449481095|ref|XP_004156080.1| PREDICTED: dehydrogenase/reductase SDR family member on chromosome X-like [Cucumis sativus]

 Score =  353 bits (907), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 178/261 (68%), Positives = 214/261 (81%), Gaps = 1/261 (0%)

Query: 1   MADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS 60
           M++I  +N+ A L+AFQVDL S QS+L FK+SLQ WL DS MH S+QLLINNAGILATSS
Sbjct: 111 MSEIKRQNEKALLKAFQVDLLSIQSILDFKNSLQLWLQDSKMHPSVQLLINNAGILATSS 170

Query: 61  RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT 120
           RLT EGYDQMM+TNY+G FFLT++LLPLLKNSP PSRIVNV+SFTHR VF+  V+ +T+ 
Sbjct: 171 RLTSEGYDQMMATNYVGPFFLTQMLLPLLKNSPFPSRIVNVSSFTHRCVFDVHVDEDTVC 230

Query: 121 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRH-VSVIAADPGVVKTNIMRE 179
           GK F     YPC+ IY+YSKLCLL+FSYELHR L LDK  H ++V  ADPGVVK NIMRE
Sbjct: 231 GKGFWGLDQYPCSSIYQYSKLCLLLFSYELHRKLSLDKESHKLTVNVADPGVVKANIMRE 290

Query: 180 VPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFN 239
           VP++LS +AFT+L+LL LLQ P+ G+NS+LDAALA PETSGVYFFGGKGR V SSA S +
Sbjct: 291 VPTYLSRVAFTILRLLRLLQLPKDGVNSILDAALASPETSGVYFFGGKGRRVGSSAQSND 350

Query: 240 SKLAGELWTTSCNLFINSQLA 260
           +KLA ELW TS NLF+ S+++
Sbjct: 351 AKLAEELWETSSNLFVKSRIS 371

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297806381|ref|XP_002871074.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata] gi|297316911|gb|EFH47333.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  348 bits (892), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 171/255 (67%), Positives = 216/255 (84%), Gaps = 1/255 (0%)

Query: 1   MADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS 60
           ++DI  +N++A+L+AF+VD+SSFQSV KF++SL+QWL +SD+HSS+QLL+NNAGILATS 
Sbjct: 95  LSDIKRQNENAQLKAFEVDISSFQSVFKFRNSLEQWLFESDLHSSVQLLVNNAGILATSC 154

Query: 61  RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT 120
           R T EG+D+MM+TNY+GAF LTKLLLPLL+NSPVPSR+VNVTSFTHR+ F+ + + +++T
Sbjct: 155 RPTVEGFDRMMATNYVGAFTLTKLLLPLLRNSPVPSRVVNVTSFTHRSAFSGRFDMDSVT 214

Query: 121 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGL-DKSRHVSVIAADPGVVKTNIMRE 179
           G  F RSK YPCARIYEYSKLCLL+FSY+LHR L L D S HVSV+A DPG VKTNIM E
Sbjct: 215 GVNFSRSKQYPCARIYEYSKLCLLLFSYQLHRQLRLTDDSHHVSVVAVDPGAVKTNIMHE 274

Query: 180 VPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFN 239
           +PS++ ++AF  LK+LGL+QSPE    SV+DAALAPPE SG YFFGG+GRT+ SSALS +
Sbjct: 275 LPSYIQVIAFYGLKILGLMQSPEDAAESVIDAALAPPEISGKYFFGGQGRTIESSALSGD 334

Query: 240 SKLAGELWTTSCNLF 254
            K+A ELW TSC +F
Sbjct: 335 PKMAKELWDTSCLIF 349

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255540331|ref|XP_002511230.1| short-chain dehydrogenase, putative [Ricinus communis] gi|223550345|gb|EEF51832.1| short-chain dehydrogenase, putative [Ricinus communis]

 Score =  342 bits (876), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 186/261 (71%), Positives = 221/261 (84%), Gaps = 1/261 (0%)

Query: 4   ITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLT 63
           I  +N+DA+++AF+VDL+SFQS++KFK SL++WLLDSDMHSSIQLLINNAGILATS RLT
Sbjct: 104 INKQNRDAQVKAFEVDLTSFQSIIKFKGSLEKWLLDSDMHSSIQLLINNAGILATSQRLT 163

Query: 64  PEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKF 123
            EGYD+MM TNY+G F LTKLLLPLL+NSP+ SRIVNVTSFTHR+VFN QV+ ET++GK 
Sbjct: 164 TEGYDEMMVTNYVGLFSLTKLLLPLLRNSPIESRIVNVTSFTHRSVFNVQVDKETVSGKC 223

Query: 124 FLRSKCYPCARIYEYSKLCLLIFSYELHRNLGL-DKSRHVSVIAADPGVVKTNIMREVPS 182
           F   K YP A IYEYSKLC+L+FSYELHR L L D+S HVSV AADPGVVKTNIMREVP 
Sbjct: 224 FSTYKFYPYAHIYEYSKLCILLFSYELHRQLRLMDESCHVSVNAADPGVVKTNIMREVPF 283

Query: 183 FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKL 242
            LS +AF VLKLLGLLQ P+ G++S+LDAALAPPETS VYFFGGKGR + SSALS +  L
Sbjct: 284 CLSSVAFIVLKLLGLLQLPDNGVSSILDAALAPPETSAVYFFGGKGRILKSSALSRDISL 343

Query: 243 AGELWTTSCNLFINSQLACRD 263
           A +LWTTSC++F N +L  ++
Sbjct: 344 AEKLWTTSCDIFENLKLNSKE 364

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42567629|ref|NP_196027.3| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|44681364|gb|AAS47622.1| At5g04070 [Arabidopsis thaliana] gi|45773892|gb|AAS76750.1| At5g04070 [Arabidopsis thaliana] gi|332003310|gb|AED90693.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  340 bits (871), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 170/255 (66%), Positives = 212/255 (83%), Gaps = 3/255 (1%)

Query: 1   MADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS 60
           ++DI  +N+DA+L+AF+VD+SSFQ VLKF+ SL+QWL +SD+HSS+QLL+NNAGILATSS
Sbjct: 99  LSDIKRQNEDAKLKAFEVDMSSFQLVLKFRSSLEQWLFESDLHSSVQLLVNNAGILATSS 158

Query: 61  RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT 120
           R T EG+D+M++TNY+GAF LTKLLLPLL+NSPVPSR+VNVTSFTHR+ F  + + +++T
Sbjct: 159 RPTVEGFDRMIATNYVGAFSLTKLLLPLLRNSPVPSRVVNVTSFTHRSAFTGRFDMDSVT 218

Query: 121 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGL-DKSRHVSVIAADPGVVKTNIMRE 179
           G  F RSK YPCARIYEYSKLCLL+FSYELHR L L D S H+SV+A DPG VKTNIM E
Sbjct: 219 GVNFSRSKQYPCARIYEYSKLCLLLFSYELHRQLHLMDDSHHISVVAVDPGAVKTNIMHE 278

Query: 180 VPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFN 239
           +PS++ ++AF  LK+LGL+QSPE    SV+DAALAPPE SG YFFG  GRT+ SS LS +
Sbjct: 279 LPSYIQVIAFCGLKILGLMQSPEDAAESVIDAALAPPEISGKYFFG--GRTIESSTLSSD 336

Query: 240 SKLAGELWTTSCNLF 254
            K+A ELW TSC +F
Sbjct: 337 PKMAKELWDTSCLIF 351

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356516031|ref|XP_003526700.1| PREDICTED: dehydrogenase/reductase SDR family member on chromosome X-like [Glycine max]

 Score =  333 bits (854), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 172/254 (67%), Positives = 204/254 (80%), Gaps = 1/254 (0%)

Query: 1   MADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS 60
           +  I  RN+ A LEAFQVDLSS +SV+KFK SLQQW LDSD+H SIQ+LINNAGILATS 
Sbjct: 121 ITKIKDRNEHAHLEAFQVDLSSIESVVKFKTSLQQWFLDSDLHCSIQILINNAGILATSP 180

Query: 61  RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT 120
           R+TPEGYDQM+ TNYIGAF LTKLLLPLL++SPV S+IVNVTSFTHR V + QV+  T++
Sbjct: 181 RVTPEGYDQMIGTNYIGAFALTKLLLPLLESSPVSSKIVNVTSFTHRAVTDVQVDEGTVS 240

Query: 121 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGL-DKSRHVSVIAADPGVVKTNIMRE 179
           G+ F RS  YPCA IYEYSKLCL++FSYELHR L L  KS  + V  ADPGVV+TN+MRE
Sbjct: 241 GERFFRSIQYPCAHIYEYSKLCLILFSYELHRQLCLMGKSHQIFVTVADPGVVQTNLMRE 300

Query: 180 VPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFN 239
           +P+ LS +A  VLK L LLQSPE G++S++DAALAPP TSG YFFGG GRT+N S LS N
Sbjct: 301 IPAILSWLAIYVLKRLRLLQSPECGVDSIVDAALAPPGTSGAYFFGGNGRTINPSTLSRN 360

Query: 240 SKLAGELWTTSCNL 253
           +KLA ELW ++  L
Sbjct: 361 AKLARELWESTSKL 374

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|9755640|emb|CAC01793.1| putative protein [Arabidopsis thaliana]

 Score =  330 bits (846), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 167/260 (64%), Positives = 212/260 (81%), Gaps = 1/260 (0%)

Query: 1   MADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS 60
           + +I ++NKDA+L++F+ D+SSF+S+  FK+SL+QWL DS +H SIQ+L+NNAGILATSS
Sbjct: 82  LKEIKNKNKDAQLKSFEADMSSFESIFTFKNSLEQWLSDSALHPSIQVLVNNAGILATSS 141

Query: 61  RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT 120
           R T +GYD+M++TNY+G FFLTKLLLPLLKNS VPSR+VNVTSFTH + F  +++ +++T
Sbjct: 142 RPTIDGYDRMIATNYVGPFFLTKLLLPLLKNSNVPSRVVNVTSFTHHSAFIQKLDKDSVT 201

Query: 121 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGL-DKSRHVSVIAADPGVVKTNIMRE 179
           G  F  S  YPCARIYEYSKLCLL+FSYELHR L L D S HVSVIAADPG VKTNIMRE
Sbjct: 202 GVCFSTSNQYPCARIYEYSKLCLLLFSYELHRQLRLIDDSSHVSVIAADPGFVKTNIMRE 261

Query: 180 VPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFN 239
           +P +++ M F   K+LGLLQSPE G  S++DAAL+ PETSG Y+FGGKGRT+ SS +S +
Sbjct: 262 LPCYITSMVFLGFKILGLLQSPEDGAESIIDAALSTPETSGAYYFGGKGRTIESSQVSRD 321

Query: 240 SKLAGELWTTSCNLFINSQL 259
            KLA +LW TSC+LF + QL
Sbjct: 322 PKLAKQLWETSCDLFNDLQL 341

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	266
TAIR|locus:2150680	359	AT5G04070 [Arabidopsis thalian	0.947	0.701	0.631	7.2e-84
TAIR|locus:2146127	364	AT5G15940 [Arabidopsis thalian	0.973	0.711	0.603	7.4e-82
UNIPROTKB|Q8N5I4	330	DHRSX "Dehydrogenase/reductase	0.868	0.7	0.298	7e-22
UNIPROTKB|O53726	311	Rv0439c "PROBABLE DEHYDROGENAS	0.868	0.742	0.330	7e-22
FB|FBgn0033205	330	CG2064 [Drosophila melanogaste	0.849	0.684	0.326	4.9e-21
UNIPROTKB|F1Q0B4	268	DHRSX "Uncharacterized protein	0.830	0.824	0.289	5.7e-20
ZFIN|ZDB-GENE-060620-2	324	dhrsx "dehydrogenase/reductase	0.838	0.688	0.299	7.2e-20
UNIPROTKB|E1BYJ6	266	DHRSX "Uncharacterized protein	0.838	0.838	0.295	9.2e-20
UNIPROTKB|O53613	303	Rv0068 "PROBABLE OXIDOREDUCTAS	0.860	0.755	0.322	9.2e-20
UNIPROTKB|F1P604	329	DHRS13 "Uncharacterized protei	0.872	0.705	0.325	1.9e-19

TAIR|locus:2150680 AT5G04070 [Arabidopsis thaliana (taxid:3702)]

 Score = 840 (300.8 bits), Expect = 7.2e-84, P = 7.2e-84
 Identities = 161/255 (63%), Positives = 202/255 (79%)

Query:     1 MADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS 60
             ++DI  +N+DA+L+AF+VD+SSFQ VLKF+ SL+QWL +SD+HSS+QLL+NNAGILATSS
Sbjct:    99 LSDIKRQNEDAKLKAFEVDMSSFQLVLKFRSSLEQWLFESDLHSSVQLLVNNAGILATSS 158

Query:    61 RLTPEGYDQMMSTNYIGAFFXXXXXXXXXXNSPVPSRIVNVTSFTHRNVFNAQVNNETIT 120
             R T EG+D+M++TNY+GAF           NSPVPSR+VNVTSFTHR+ F  + + +++T
Sbjct:   159 RPTVEGFDRMIATNYVGAFSLTKLLLPLLRNSPVPSRVVNVTSFTHRSAFTGRFDMDSVT 218

Query:   121 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGL-DKSRHVSVIAADPGVVKTNIMRE 179
             G  F RSK YPCARIYEYSKLCLL+FSYELHR L L D S H+SV+A DPG VKTNIM E
Sbjct:   219 GVNFSRSKQYPCARIYEYSKLCLLLFSYELHRQLHLMDDSHHISVVAVDPGAVKTNIMHE 278

Query:   180 VPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFN 239
             +PS++ ++AF  LK+LGL+QSPE    SV+DAALAPPE SG YFFGG  RT+ SS LS +
Sbjct:   279 LPSYIQVIAFCGLKILGLMQSPEDAAESVIDAALAPPEISGKYFFGG--RTIESSTLSSD 336

Query:   240 SKLAGELWTTSCNLF 254
              K+A ELW TSC +F
Sbjct:   337 PKMAKELWDTSCLIF 351

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2146127 AT5G15940 [Arabidopsis thaliana (taxid:3702)]

 Score = 821 (294.1 bits), Expect = 7.4e-82, P = 7.4e-82
 Identities = 157/260 (60%), Positives = 202/260 (77%)

Query:     1 MADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS 60
             + +I ++NKDA+L++F+ D+SSF+S+  FK+SL+QWL DS +H SIQ+L+NNAGILATSS
Sbjct:   100 LKEIKNKNKDAQLKSFEADMSSFESIFTFKNSLEQWLSDSALHPSIQVLVNNAGILATSS 159

Query:    61 RLTPEGYDQMMSTNYIGAFFXXXXXXXXXXNSPVPSRIVNVTSFTHRNVFNAQVNNETIT 120
             R T +GYD+M++TNY+G FF          NS VPSR+VNVTSFTH + F  +++ +++T
Sbjct:   160 RPTIDGYDRMIATNYVGPFFLTKLLLPLLKNSNVPSRVVNVTSFTHHSAFIQKLDKDSVT 219

Query:   121 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGL-DKSRHVSVIAADPGVVKTNIMRE 179
             G  F  S  YPCARIYEYSKLCLL+FSYELHR L L D S HVSVIAADPG VKTNIMRE
Sbjct:   220 GVCFSTSNQYPCARIYEYSKLCLLLFSYELHRQLRLIDDSSHVSVIAADPGFVKTNIMRE 279

Query:   180 VPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFN 239
             +P +++ M F   K+LGLLQSPE G  S++DAAL+ PETSG Y+FGGKGRT+ SS +S +
Sbjct:   280 LPCYITSMVFLGFKILGLLQSPEDGAESIIDAALSTPETSGAYYFGGKGRTIESSQVSRD 339

Query:   240 SKLAGELWTTSCNLFINSQL 259
              KLA +LW TSC+LF + QL
Sbjct:   340 PKLAKQLWETSCDLFNDLQL 359

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

UNIPROTKB|Q8N5I4 DHRSX "Dehydrogenase/reductase SDR family member on chromosome X" [Homo sapiens (taxid:9606)]

 Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
 Identities = 78/261 (29%), Positives = 132/261 (50%)

Query:     1 MADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS 60
             ++ I     + ++E    DL+S  S+ +F   +Q++ +       + +LINNAG++    
Sbjct:    84 VSKIKEETLNDKVEFLYCDLASMTSIRQF---VQKFKMKK---IPLHVLINNAGVMMVPQ 137

Query:    61 RLTPEGYDQMMSTNYIGAFFXXXXXXXXXXNSPVP---SRIVNVTSFTHRNVFNAQVNNE 117
             R T +G+++    NY+G F            S  P   +R+V V+S TH   + A++N +
Sbjct:   138 RKTRDGFEEHFGLNYLGHFLLTNLLLDTLKESGSPGHSARVVTVSSATH---YVAELNMD 194

Query:   118 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIM 177
              +       S CY     Y  SKL L++F+Y L R L  + S HV+    DPGVV T++ 
Sbjct:   195 DLQS-----SACYSPHAAYAQSKLALVLFTYHLQRLLAAEGS-HVTANVVDPGVVNTDVY 248

Query:   178 REVPSFLSLMAFTVLKLLG--LLQSPEKGINSVLDAALAPPETSGV---YFFGGKGRTVN 232
             + V  + + +A    KLLG  L ++P++G  + + AA+ P E  GV   Y +  K     
Sbjct:   249 KHV-FWATRLA---KKLLGWLLFKTPDEGAWTSIYAAVTP-ELEGVGGHYLYNEK--ETK 301

Query:   233 SSALSFNSKLAGELWTTSCNL 253
             S  +++N KL  +LW+ SC +
Sbjct:   302 SLHVTYNQKLQQQLWSKSCEM 322

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|O53726 Rv0439c "PROBABLE DEHYDROGENASE/REDUCTASE" [Mycobacterium tuberculosis H37Rv (taxid:83332)]

 Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
 Identities = 85/257 (33%), Positives = 123/257 (47%)

Query:     2 ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSR 61
             A I +    A +   Q+DL S  SV    D+L+        +  I +LINNAG++ T  +
Sbjct:    63 ARIMAARPGAHVTLQQLDLCSLDSVRAAADALRT------AYPRIDVLINNAGVMWTPKQ 116

Query:    62 LTPEGYDQMMSTNYIGAFFXXXXXXXXXXNSPVP-SRIVNVTSFTHRNVFNAQVNNETIT 120
             +T +G++    TN++G F             PVP SR+V V+S  HR   +A ++ + + 
Sbjct:   117 VTKDGFELQFGTNHLGHFALTGLVLDHML--PVPGSRVVTVSSQGHR--IHAAIHFDDLQ 172

Query:   121 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV 180
              +     + Y     Y  +KL  L+F+YEL R LG +  +    +AA PG   T + R +
Sbjct:   173 WE-----RRYNRVAAYGQAKLANLLFTYELQRRLG-EAGKSTIAVAAHPGGSNTELTRNL 226

Query:   181 PSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYF----FG---GKGRTVNS 233
             P  +  +A TVL  L L QSPE G    L AA  P    G Y+    FG   G  + V S
Sbjct:   227 PRLIRPVA-TVLGPL-LFQSPEMGALPTLRAATDPTTQGGQYYGPDGFGEQRGHPKVVQS 284

Query:   234 SALSFNSKLAGELWTTS 250
             SA S +  L   LWT S
Sbjct:   285 SAQSHDKDLQRRLWTVS 301

GO:0005886 "plasma membrane" evidence=IDA

FB|FBgn0033205 CG2064 [Drosophila melanogaster (taxid:7227)]

 Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
 Identities = 83/254 (32%), Positives = 123/254 (48%)

Query:     3 DITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL 62
             DI     +  + + ++DLSS  S+ KF D  ++          + +LINNAG++     L
Sbjct:    86 DIIKETNNQNIFSRELDLSSLDSIRKFVDGFKK------EQPKLHVLINNAGVMRCPKTL 139

Query:    63 TPEGYDQMMSTNYIGAFFXXXXXXXXXXNSPVPSRIVNVTSFTH-RNVFN-AQVNNETIT 120
             T +GY+  +  N+IG F           NS  PSRIV V+S  H R   N A +N+E   
Sbjct:   140 TKDGYELQLGVNHIGHFLLTNLLLDVLKNS-APSRIVVVSSLAHARGSINVADLNSE--- 195

Query:   121 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV 180
                    K Y     Y  SKL  ++F+ EL + L   +   V+V A  PGVV T + R  
Sbjct:   196 -------KSYDEGLAYSQSKLANVLFTRELAKRL---EGSGVTVNALHPGVVDTELARNW 245

Query:   181 PSF-LSLMAFTVLKLLG-LLQSPEKGINSVLDAALAPP--ETSGVYFFGGKGRTVNSSAL 236
               F  +L+ F +  ++  LL++P+ G  + + AAL P     SG+YF   K + V S AL
Sbjct:   246 AFFQTNLVKFFLKPMIWPLLKTPKSGAQTSIYAALDPELKNISGLYFSDCKPKPVASGAL 305

Query:   237 SFNSKLAGELWTTS 250
               + K+A  LW  S
Sbjct:   306 --DDKVAKFLWAES 317

GO:0008152 "metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|F1Q0B4 DHRSX "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
 Identities = 72/249 (28%), Positives = 120/249 (48%)

Query:    12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMM 71
             ++E    DL+S +S+ +F    ++  +   +H    +L+NNAG++    R T +G+++  
Sbjct:    28 KVEFLYCDLASLRSIRQFVQKFKKKKIP--LH----VLVNNAGVMMVPERTTEDGFEEHF 81

Query:    72 STNYIGAFFXXXXXXXXXXNSPVP---SRIVNVTSFTHRNVFNAQVNNETITGKFFLRSK 128
               NY+G F            S  P   +R+V V+S TH   +  +++ + + G     S+
Sbjct:    82 GLNYLGHFLLTNLLLDTLKESGAPGRCARVVTVSSATH---YIGELDMDDLQG-----SR 133

Query:   129 CYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMA 188
             CY     Y  SKL L++F+Y L R L    S  V+    DPGVV TN+ R V  F     
Sbjct:   134 CYSPHAAYAQSKLALVLFTYHLQRLLAAQGSP-VTANVVDPGVVNTNLYRHV--FWGTRL 190

Query:   189 FTVLKLLG--LLQSPEKGINSVLDAALAPP--ETSGVYFFGGKGRTVNSSALSFNSKLAG 244
               + KL G    ++P++G  + + AA+ P      G Y +  K     S A++++  L  
Sbjct:   191 --IKKLFGWWFFKTPDEGAWTSVYAAVTPDLEGLGGRYLYNEK--ETKSLAVTYDLDLQT 246

Query:   245 ELWTTSCNL 253
             ELW  SC +
Sbjct:   247 ELWARSCQM 255

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

ZFIN|ZDB-GENE-060620-2 dhrsx "dehydrogenase/reductase (SDR family) X-linked" [Danio rerio (taxid:7955)]

 Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
 Identities = 74/247 (29%), Positives = 120/247 (48%)

Query:    12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMM 71
             ++E   +DL+S  SV +F   +Q++   +     + +L+NNAG++    R T +G++   
Sbjct:    93 KVEFMYLDLASLTSVRQF---VQRY---NAKGLPLHVLVNNAGVMLVPERRTEDGFELHF 146

Query:    72 STNYIGAFFXXXXXXXXXXNSPVP---SRIVNVTSFTHRNVFNAQVNNETITGKFFLRSK 128
               NY+G F            +  P   SRIV ++S TH   +  ++  + + G+      
Sbjct:   147 GLNYLGHFLLTNLLLGALRKTGKPGKCSRIVIMSSATH---YGGRLTLDDLQGRL----- 198

Query:   129 CYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMA 188
             CY     Y  SKL LL+ SY L   L L +   V+V A DPG+V T +   + S   +  
Sbjct:   199 CYSSHAAYAQSKLALLLLSYHLQEQL-LVRGDPVTVNAVDPGMVDTALYDNLCSPAQVAK 257

Query:   189 FTVLKLLGLLQSPEKGINSVLDAALAPP--ETSGVYFFGGKGRTVNSSALSFNSKLAGEL 246
                 KLL   ++P +G ++ + AA A       G+Y + G  R   SSALS++ +L  +L
Sbjct:   258 KPFAKLL--FRTPAEGASTAIYAAAASELEGIGGLYLYNG--RKTESSALSYDKRLQTKL 313

Query:   247 WTTSCNL 253
             W  SC L
Sbjct:   314 WKQSCAL 320

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

UNIPROTKB|E1BYJ6 DHRSX "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
 Identities = 73/247 (29%), Positives = 124/247 (50%)

Query:    12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMM 71
             ++E    DL+S +S+ +F   +QQ+   +     + +L+NNAG++    R T +G++   
Sbjct:    28 KVEFLYCDLASMKSIRQF---VQQFRAKN---CPLHVLVNNAGVMLVPERQTEDGFEVHF 81

Query:    72 STNYIGAFFXXXXXXXXXXNSPVPS---RIVNVTSFTHRNVFNAQVNNETITGKFFLRSK 128
               NY+G F            S   S   RIV V+S TH  V    +++        L+S+
Sbjct:    82 GLNYLGHFLLTNLLLDTLKQSGTHSHSARIVTVSSATHY-VGKLHLDD--------LQSR 132

Query:   129 C-YPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLM 187
             C Y     Y  SKL L++F+Y L   L  + S HV+    DPGVV T + + V  F  + 
Sbjct:   133 CSYSPHGAYAQSKLALVLFTYRLQHLLTANGS-HVTANVVDPGVVNTELYKHV--FWVVK 189

Query:   188 AFTVLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRTVNSSALSFNSKLAGEL 246
              F  +    L ++PE+G ++ + AA++P  E +G  +   + RT  S+ ++++ +L   L
Sbjct:   190 VFKWMTAWLLFKTPEEGASTTIYAAVSPEIEGAGGCYLYNEERT-KSADVAYDEELQRRL 248

Query:   247 WTTSCNL 253
             WT SC +
Sbjct:   249 WTESCKM 255

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|O53613 Rv0068 "PROBABLE OXIDOREDUCTASE" [Mycobacterium tuberculosis H37Rv (taxid:83332)]

 Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
 Identities = 83/257 (32%), Positives = 121/257 (47%)

Query:     2 ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSR 61
             A IT     A +E  ++DL+S  SV   + +  Q  L SD H  I LLINNAG++ T  +
Sbjct:    56 ARITEATPGAEVELQELDLTSLASV---RAAAAQ--LKSD-HQRIDLLINNAGVMYTPRQ 109

Query:    62 LTPEGYDQMMSTNYIGAFFXXXXXXXXXXNSPVP-SRIVNVTSFTHRNVFNAQVNNETIT 120
              T +G++    TN++G F             PV  SR+V ++S  HR    A ++ + + 
Sbjct:   110 TTADGFEMQFGTNHLGHFALTGLLIDRLL--PVAGSRVVTISSVGHR--IRAAIHFDDLQ 165

Query:   121 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV 180
              +     + Y     Y  +KL  L+F+YEL R L    +     +A+ PGV  T ++R +
Sbjct:   166 WE-----RRYRRVAAYGQAKLANLLFTYELQRRLAPGGT--TIAVASHPGVSNTEVVRNM 218

Query:   181 PSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYF----FG---GKGRTVNS 233
             P    L+A   + L  L+Q  E G    L AA  P    G YF    FG   G  + V S
Sbjct:   219 PR--PLVAVAAI-LAPLMQDAELGALPTLRAATDPAVRGGQYFGPDGFGEIRGYPKVVAS 275

Query:   234 SALSFNSKLAGELWTTS 250
             SA S + +L   LW  S
Sbjct:   276 SAQSHDEQLQRRLWAVS 292

GO:0005886 "plasma membrane" evidence=IDA

UNIPROTKB|F1P604 DHRS13 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
 Identities = 83/255 (32%), Positives = 119/255 (46%)

Query:     1 MADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS 60
             +A+I   +K   L   QVDLSS  S+  F     +WLL    +  I LL+NNA I     
Sbjct:    89 LAEIQVASKGTCLLLGQVDLSSMASIRSFA----RWLLQE--YPEIHLLVNNAAISGFPK 142

Query:    61 RLTPEGYDQMMSTNYIGAFFXXXXXXXXXXNSPVPSRIVNVTSFTHRNVFNAQVNNETIT 120
              LTPEG D   +TNY+G F            +   +R+VNV+SF H + +   V+ + +T
Sbjct:   143 TLTPEGLDLTFATNYVGPFLLTNLLQGALQRAG-SARVVNVSSFRHAHGY---VDEKHLT 198

Query:   121 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV 180
             G      K     + Y+ SKL L  F+ EL R L   +   V+V + DPGVV T IM+  
Sbjct:   199 GA----GKPLNLIQSYDCSKLLLTSFTGELARRL---QGTGVTVNSVDPGVVYTEIMKPY 251

Query:   181 PSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP--ETSGVYFFGGKGRTVNSSALSF 238
             P +L    F +       +  ++G   VL  +LA      SG YF      T+ + A   
Sbjct:   252 P-WLYRFLFWLFSFF--CKDVKQGAIPVLYLSLAKELDGVSGKYFSSSCMITLPTEAAQ- 307

Query:   239 NSKLAGELWTTSCNL 253
             + ++A  LW  S  L
Sbjct:   308 DPQVAQSLWNASVQL 322

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	266
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	9e-49
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	6e-38
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	2e-26
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	6e-22
cd05233	234	cd05233, SDR_c, classical (c) SDRs	2e-19
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	4e-19
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	1e-18
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	4e-18
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	3e-13
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	8e-13
PRK07453	322	PRK07453, PRK07453, protochlorophyllide oxidoreduc	9e-13
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	3e-10
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	6e-10
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	7e-10
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	8e-10
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-10
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	2e-09
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-09
PRK07023	243	PRK07023, PRK07023, short chain dehydrogenase; Pro	2e-09
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	3e-09
TIGR01289	314	TIGR01289, LPOR, light-dependent protochlorophylli	4e-09
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	6e-09
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	1e-08
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	1e-08
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	2e-08
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	2e-08
PLN00015	308	PLN00015, PLN00015, protochlorophyllide reductase	2e-08
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	2e-08
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	3e-08
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	3e-08
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	3e-08
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	5e-08
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	6e-08
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	1e-07
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	1e-07
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	1e-07
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	2e-07
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	4e-07
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-07
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	5e-07
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	6e-07
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	6e-07
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	9e-07
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-06
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	1e-06
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	1e-06
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	5e-06
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	5e-06
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	7e-06
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	7e-06
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	8e-06
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	9e-06
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	1e-05
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	2e-05
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	2e-05
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	3e-05
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	6e-05
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	6e-05
cd08951	260	cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13	1e-04
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	1e-04
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	1e-04
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	1e-04
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	2e-04
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-04
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	2e-04
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	3e-04
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	3e-04
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	3e-04
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	3e-04
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	3e-04
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	3e-04
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	4e-04
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-04
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	5e-04
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	5e-04
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	6e-04
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	7e-04
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	8e-04
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-04
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	0.001
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	0.001
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	0.001
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	0.001
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	0.002
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	0.002
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	0.002
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	0.002
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	0.002
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	0.003
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	0.003
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	0.003
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	0.004
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	0.004
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	0.004
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	0.004
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	0.004

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score =  162 bits (411), Expect = 9e-49
 Identities = 89/249 (35%), Positives = 130/249 (52%), Gaps = 23/249 (9%)

Query: 1   MADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS 60
            A+I     +A++E  Q+DLSS  SV +F +              + +LINNAGI+A   
Sbjct: 42  AAEIKKETGNAKVEVIQLDLSSLASVRQFAEEFL------ARFPRLDILINNAGIMAPPR 95

Query: 61  RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT 120
           RLT +G++   + NY+G F LT LLLP+LK S  PSRIVNV+S  HR             
Sbjct: 96  RLTKDGFELQFAVNYLGHFLLTNLLLPVLKASA-PSRIVNVSSIAHR------AGPIDFN 148

Query: 121 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV 180
                 +K Y   + Y  SKL  ++F+ EL R L   +   V+V A  PGVV+T ++R  
Sbjct: 149 DLDLENNKEYSPYKAYGQSKLANILFTRELARRL---EGTGVTVNALHPGVVRTELLRRN 205

Query: 181 PSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP--PETSGVYFFGGKGRTVNSSALSF 238
            SF   + + +L+   L +SPE+G  + L AA +P     SG YF     +   SS+ + 
Sbjct: 206 GSF--FLLYKLLRPF-LKKSPEQGAQTALYAATSPELEGVSGKYF--SDCKIKMSSSEAL 260

Query: 239 NSKLAGELW 247
           + +LA +LW
Sbjct: 261 DEELAEKLW 269

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score =  134 bits (340), Expect = 6e-38
 Identities = 94/257 (36%), Positives = 127/257 (49%), Gaps = 26/257 (10%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSR 61
           A IT+    A +   ++DL+S  SV    D+L+        +  I LLINNAG++ T  +
Sbjct: 58  ARITAATPGADVTLQELDLTSLASVRAAADALR------AAYPRIDLLINNAGVMYTPKQ 111

Query: 62  LTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVP-SRIVNVTSFTHRNVFNAQVNNETIT 120
            T +G++    TN++G F LT LLL  L   PVP SR+V V+S  HR    A ++ + + 
Sbjct: 112 TTADGFELQFGTNHLGHFALTGLLLDRLL--PVPGSRVVTVSSGGHR--IRAAIHFDDLQ 167

Query: 121 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV 180
            +   R   Y     Y  SKL  L+F+YEL R L    +  ++V AA PGV  T + R +
Sbjct: 168 WE---RR--YNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAV-AAHPGVSNTELARNL 221

Query: 181 PSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYF----FG---GKGRTVNS 233
           P  L     TVL  L L QSPE G    L AA  P    G Y+    FG   G  + V S
Sbjct: 222 PRAL-RPVATVLAPL-LAQSPEMGALPTLRAATDPAVRGGQYYGPDGFGEQRGYPKVVAS 279

Query: 234 SALSFNSKLAGELWTTS 250
           SA S +  L   LW  S
Sbjct: 280 SAQSHDEDLQRRLWAVS 296

Length = 306

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score =  104 bits (260), Expect = 2e-26
 Identities = 76/255 (29%), Positives = 117/255 (45%), Gaps = 29/255 (11%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSR 61
           A+I     +  +    +DL+S +S+  F     ++L + D    + +LINNAG++     
Sbjct: 43  AEIRRDTLNHEVIVRHLDLASLKSIRAF---AAEFLAEED---RLDVLINNAGVMRCPYS 96

Query: 62  LTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR--NVFNAQVNNETI 119
            T +G++     N++G F LT LLL LLK S  PSRIVNV+S  H+   +    +N+E  
Sbjct: 97  KTEDGFEMQFGVNHLGHFLLTNLLLDLLKKS-APSRIVNVSSLAHKAGKINFDDLNSE-- 153

Query: 120 TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE 179
                   K Y     Y  SKL  ++F+ EL R L   +   V+V A  PGVV+T + R 
Sbjct: 154 --------KSYNTGFAYCQSKLANVLFTRELARRL---QGTGVTVNALHPGVVRTELGRH 202

Query: 180 V--PSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP--PETSGVYFFGGKGRTVNSSA 235
                         L     +++P +G  + +  ALA      SG YF   K +     A
Sbjct: 203 TGIHHLFLSTLLNPLFWP-FVKTPREGAQTSIYLALAEELEGVSGKYFSDCKLKEPAPEA 261

Query: 236 LSFNSKLAGELWTTS 250
           +  + + A  LW  S
Sbjct: 262 M--DEETARRLWEIS 274

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score = 92.2 bits (229), Expect = 6e-22
 Identities = 75/279 (26%), Positives = 112/279 (40%), Gaps = 59/279 (21%)

Query: 12  RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI---LATSSRLTPEGYD 68
                  DL+S  SV +F D+ ++          +  L+ NA +    A   R T +G++
Sbjct: 52  SYSVLHCDLASLDSVRQFVDNFRRTG------RPLDALVCNAAVYLPTAKEPRFTADGFE 105

Query: 69  QMMSTNYIGAFFLTKLLLPLLKNSP-VPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRS 127
             +  N++G F LT LLL  L+ S     RIV V S TH        N  T+ G    R+
Sbjct: 106 LTVGVNHLGHFLLTNLLLEDLQRSENASPRIVIVGSITH--------NPNTLAGNVPPRA 157

Query: 128 KC---------------------YPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA 166
                                  +  A+ Y+ SK+C ++ +YELHR   L +   ++  +
Sbjct: 158 TLGDLEGLAGGLKGFNSMIDGGEFEGAKAYKDSKVCNMLTTYELHRR--LHEETGITFNS 215

Query: 167 ADPGVV-KTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSV------LDAALAPPE-- 217
             PG + +T + RE       +     K         KG  S       L A +A P   
Sbjct: 216 LYPGCIAETGLFREHYPLFRTLFPPFQKY------ITKGYVSEEEAGERLAAVIADPSLG 269

Query: 218 TSGVYFFGGK--GRTVN-SSALSFNSKLAGELWTTSCNL 253
            SGVY+  GK  G   N SS  S + + A +LW  S  L
Sbjct: 270 VSGVYWSWGKASGSFENQSSQESSDDEKARKLWEISEKL 308

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score = 84.3 bits (209), Expect = 2e-19
 Identities = 53/237 (22%), Positives = 85/237 (35%), Gaps = 56/237 (23%)

Query: 4   ITSRNKDA------------RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLIN 51
           +  RN++A               A Q D+S  + V    +         +    + +L+N
Sbjct: 27  LADRNEEALAELAAIEALGGNAVAVQADVSDEEDVEALVEEAL------EEFGRLDILVN 80

Query: 52  NAGILATSS--RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV 109
           NAGI        LT E +D+++  N  G F LT+  LP +K      RIVN++S      
Sbjct: 81  NAGIARPGPLEELTDEDWDRVLDVNLTGVFLLTRAALPHMKKQG-GGRIVNISSVA---- 135

Query: 110 FNAQVNNETITG----KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLD-KSRHVSV 164
                           K  L                        L R+L L+     + V
Sbjct: 136 --GLRPLPGQAAYAASKAALEG----------------------LTRSLALELAPYGIRV 171

Query: 165 IAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGV 221
            A  PG+V T ++ ++    +         LG L +PE+   +V+   LA  E S +
Sbjct: 172 NAVAPGLVDTPMLAKLGPEEAEKELAAAIPLGRLGTPEEVAEAVV--FLASDEASYI 226

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score = 84.7 bits (210), Expect = 4e-19
 Identities = 70/242 (28%), Positives = 106/242 (43%), Gaps = 38/242 (15%)

Query: 1   MADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS 60
           +A I +   DA+L    +DLSS  SV    + L+           I LLINNAG++    
Sbjct: 55  VAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA------EGRPIHLLINNAGVMTPPE 108

Query: 61  R-LTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF--THRNVFNAQVNNE 117
           R  T +G++    TN++G F LT  LLPLL+     +R+ + +S       +    +N E
Sbjct: 109 RQTTADGFELQFGTNHLGHFALTAHLLPLLRAG--RARVTSQSSIAARRGAINWDDLNWE 166

Query: 118 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRH----VSVIAADPGVVK 173
                     + Y   R Y  SK+ + +F+ EL R     +SR     ++   A PGV  
Sbjct: 167 ----------RSYAGMRAYSQSKIAVGLFALELDR-----RSRAAGWGITSNLAHPGVAP 211

Query: 174 TNIMREVPSF------LSLMAFTVLKLLGLL-QSPEKGINSVLDAALAPPETSGVYFFGG 226
           TN++   P        L +     L   G L  + E  I   L AA + P+  G  F+G 
Sbjct: 212 TNLLAARPEVGRDKDTLMVRLIRSLSARGFLVGTVESAILPALYAATS-PDAEGGAFYGP 270

Query: 227 KG 228
           +G
Sbjct: 271 RG 272

Length = 313

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 82.6 bits (204), Expect = 1e-18
 Identities = 69/249 (27%), Positives = 120/249 (48%), Gaps = 25/249 (10%)

Query: 11  ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQM 70
           AR+EA  +DL+S +SV +F ++ +      +    + +L+ NA + A    LT +G +  
Sbjct: 52  ARVEAMTLDLASLRSVQRFAEAFKA----KNSP--LHVLVCNAAVFALPWTLTEDGLETT 105

Query: 71  MSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRS--- 127
              N++G F+L +LL  +L+ S  P+R++ V+S +HR      + +      F L S   
Sbjct: 106 FQVNHLGHFYLVQLLEDVLRRSA-PARVIVVSSESHR---FTDLPDSCGNLDFSLLSPPK 161

Query: 128 KCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG-VVKTNIMREVPSFLSL 186
           K Y     Y  +KLC ++FS ELHR L     R ++  +  PG ++ ++I R      +L
Sbjct: 162 KKYWSMLAYNRAKLCNILFSNELHRRL---SPRGITSNSLHPGNMMYSSIHRNW-WVYTL 217

Query: 187 MAFTVLKLLGLLQSPEKGINSVLDAALAPPET--SGVYFFGGKGRTVNSSALSFNSKLAG 244
           + FT+ +     +S ++G  + +  A AP      G+YF          S  + +   A 
Sbjct: 218 L-FTLAR--PFTKSMQQGAATTVYCATAPELEGLGGMYF--NNCFRCLPSPEAQSEATAQ 272

Query: 245 ELWTTSCNL 253
           +LW  S  L
Sbjct: 273 QLWELSERL 281

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 80.4 bits (199), Expect = 4e-18
 Identities = 59/226 (26%), Positives = 87/226 (38%), Gaps = 54/226 (23%)

Query: 7   RNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS---SRLT 63
           R +   +   Q+D++   S+    D +++       +  + +L+NNAGI       S  T
Sbjct: 46  RAEGLSVRFHQLDVTDDASIEAAADFVEE------KYGGLDILVNNAGIAFKGFDDSTPT 99

Query: 64  PEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKF 123
            E   + M TN+ G   +T+ LLPLLK SP   RIVNV+S                 G  
Sbjct: 100 REQARETMKTNFFGTVDVTQALLPLLKKSPAG-RIVNVSS---------------GLG-- 141

Query: 124 FLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF 183
                       Y  SK  L   +  L + L   K   + V A  PG VKT+        
Sbjct: 142 -------SLTSAYGVSKAALNALTRILAKEL---KETGIKVNACCPGWVKTD-------- 183

Query: 184 LSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETS-GVYFFGGKG 228
              M           ++PE+G  + +  AL PP+      FF  K 
Sbjct: 184 ---MGG-----GKAPKTPEEGAETPVYLALLPPDGEPTGKFFSDKK 221

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 67.5 bits (165), Expect = 3e-13
 Identities = 52/207 (25%), Positives = 77/207 (37%), Gaps = 39/207 (18%)

Query: 2   ADITSRNKDARLEAFQVDLSS-FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS 60
           A         R  A   D+S   +SV     + ++          I +L+NNAGI    +
Sbjct: 48  AAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEEE------FGRIDILVNNAGIAGPDA 101

Query: 61  RL---TPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE 117
            L   T E +D+++  N +GAF LT+  LPL+K      RIVN++S         Q    
Sbjct: 102 PLEELTEEDWDRVIDVNLLGAFLLTRAALPLMK----KQRIVNISSVAGLGGPPGQAA-- 155

Query: 118 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIM 177
                             Y  SK  L+  +  L   L     R + V A  PG + T + 
Sbjct: 156 ------------------YAASKAALIGLTKALALELA---PRGIRVNAVAPGYIDTPMT 194

Query: 178 REVPSFLSLMAFTVLKL--LGLLQSPE 202
             + S        +     LG L +PE
Sbjct: 195 AALESAELEALKRLAARIPLGRLGTPE 221

Length = 251

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 66.6 bits (163), Expect = 8e-13
 Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 7/89 (7%)

Query: 19  DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGA 78
           DL+  +SV  F +         D    I +LINNAG++A       +G++   +TN++G 
Sbjct: 79  DLADLESVRAFAERF------LDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGH 132

Query: 79  FFLTKLLLPLLKNSPVPSRIVNVTSFTHR 107
           F L  LL P L      +R+V ++S  HR
Sbjct: 133 FALVNLLWPALAAGA-GARVVALSSAGHR 160

Length = 315

>gnl|CDD|180983 PRK07453, PRK07453, protochlorophyllide oxidoreductase; Validated

 Score = 66.6 bits (163), Expect = 9e-13
 Identities = 52/193 (26%), Positives = 78/193 (40%), Gaps = 44/193 (22%)

Query: 17  QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI---LATSSRLTPEGYDQMMST 73
            +DL    SV +F D  +       +   +  L+ NA +   L      +P+GY+  M+T
Sbjct: 61  HIDLGDLDSVRRFVDDFRA------LGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMAT 114

Query: 74  NYIGAFFLTKLLLPLLKNSPVPS-RIVNVTSFTH-----------------------RNV 109
           N++G F L  LLL  LK SP P  R+V + + T                           
Sbjct: 115 NHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPADLGDLSGFEAG 174

Query: 110 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP 169
           F A ++     GK F   K       Y+ SKLC ++   ELHR     +S  ++  +  P
Sbjct: 175 FKAPIS--MADGKKFKPGKA------YKDSKLCNMLTMRELHRR--YHESTGITFSSLYP 224

Query: 170 G-VVKTNIMREVP 181
           G V  T + R  P
Sbjct: 225 GCVADTPLFRNTP 237

Length = 322

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 58.8 bits (143), Expect = 3e-10
 Identities = 37/186 (19%), Positives = 64/186 (34%), Gaps = 38/186 (20%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATS 59
             +          A  +D++   +V    ++L       +    I +L+NNAG+      
Sbjct: 44  EALADEIGAGAALALALDVTDRAAVEAAIEALP------EEFGRIDILVNNAGLALGDPL 97

Query: 60  SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK--NSPVPSRIVNVTSFTHRNVF-NAQVNN 116
                + +D+M+ TN  G    T+ +LP +    S     I+N+ S   R  +    V  
Sbjct: 98  DEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGH---IINLGSIAGRYPYPGGAVYG 154

Query: 117 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI 176
            T   K  +R+                  FS  L + L       + V    PG+V+T  
Sbjct: 155 AT---KAAVRA------------------FSLGLRQELA---GTGIRVTVISPGLVETTE 190

Query: 177 MREVPS 182
              V  
Sbjct: 191 FSTVRF 196

Length = 246

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 58.0 bits (140), Expect = 6e-10
 Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 7/86 (8%)

Query: 18  VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIG 77
           VD+S  + V +F +  ++          + +LINNAG +     LT +G ++  +TN +G
Sbjct: 59  VDMSDPKQVWEFVEEFKE------EGKKLHVLINNAGCMVNKRELTEDGLEKNFATNTLG 112

Query: 78  AFFLTKLLLPLLKNSPVPSRIVNVTS 103
            + LT  L+P+L+    P R++ V+S
Sbjct: 113 TYILTTHLIPVLEKEEDP-RVITVSS 137

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 57.6 bits (140), Expect = 7e-10
 Identities = 48/240 (20%), Positives = 83/240 (34%), Gaps = 63/240 (26%)

Query: 5   TSRNKDA----------RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG 54
           T+RN D            LE  ++D++  +S+   K ++++ +   +    I +L+NNAG
Sbjct: 30  TARNPDKLESLGELLNDNLEVLELDVTDEESI---KAAVKEVI---ERFGRIDVLVNNAG 83

Query: 55  ILATSS--RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA 112
                     + E   ++   N  G   +T+  LPL++      RIVNV+S         
Sbjct: 84  YGLFGPLEETSIEEVRELFEVNVFGPLRVTRAFLPLMRKQGSG-RIVNVSS--------- 133

Query: 113 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFS----YELHRNLGLDKSRHVSVIAAD 168
                 + G         P    Y  SK  L   S     EL    G+     V++I  +
Sbjct: 134 ------VAGLV-----PTPFLGPYCASKAALEALSESLRLEL-APFGI----KVTII--E 175

Query: 169 PGVVKTNIMREVPS-------------FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP 215
           PG V+T                         +      +      PEK  + ++ A  + 
Sbjct: 176 PGPVRTGFADNAAGSALEDPEISPYAPERKEIKENAAGVGSNPGDPEKVADVIVKALTSE 235

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 57.3 bits (139), Expect = 8e-10
 Identities = 51/231 (22%), Positives = 83/231 (35%), Gaps = 50/231 (21%)

Query: 8   NKDARLEAFQVDLSS--FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL--- 62
              +RL   ++D++    +S     + L    LD        +LINNAGIL +       
Sbjct: 44  ASHSRLHILELDVTDEIAESAEAVAERLGDAGLD--------VLINNAGILHSYGPASEV 95

Query: 63  TPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGK 122
             E   ++   N +G   LT+  LPLL      ++I+N++S                +  
Sbjct: 96  DSEDLLEVFQVNVLGPLLLTQAFLPLLLKG-ARAKIINISS-------------RVGSIG 141

Query: 123 FFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS 182
                  Y     Y  SK  L + +  L   L   K   ++V++  PG V+T++      
Sbjct: 142 DNTSGGWYS----YRASKAALNMLTKSLAVEL---KRDGITVVSLHPGWVRTDMGGPFA- 193

Query: 183 FLSLMAFTVLKLLGLLQSPE--KGINSVLDAALAPPETSGVYFFGGKGRTV 231
                     K  G +   E   G+  V+D      E SG  F    G  +
Sbjct: 194 ----------KNKGPITPEESVAGLLKVIDNLN--EEDSG-KFLDYDGTEI 231

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 57.2 bits (139), Expect = 9e-10
 Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 13/96 (13%)

Query: 12  RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDM--HSSIQLLINNAGIL--ATSSRLTPEGY 67
           R +A Q D++        K +L+   + + +     I +L+NNAGI      + ++ + +
Sbjct: 57  RAQAVQADVTD-------KAALEA-AVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEW 108

Query: 68  DQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           D+++  N  G F L + ++P ++      RIVN++S
Sbjct: 109 DEVIDVNLSGVFHLLRAVVPPMRKQR-GGRIVNISS 143

Length = 249

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 56.5 bits (137), Expect = 2e-09
 Identities = 24/101 (23%), Positives = 44/101 (43%), Gaps = 11/101 (10%)

Query: 12  RLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYD 68
           +  A QVD+    ++       ++ +         + +L+ NAGI  L   + +  E ++
Sbjct: 56  KARARQVDVRDRAALKAAVAAGVEDF-------GRLDILVANAGIFPLTPFAEMDDEQWE 108

Query: 69  QMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV 109
           +++  N  G F LT+  LP L  +    RIV  +S     V
Sbjct: 109 RVIDVNLTGTFLLTQAALPALIRAGGG-RIVLTSSVAGPRV 148

Length = 251

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 56.4 bits (137), Expect = 2e-09
 Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 45/196 (22%)

Query: 15  AFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMM 71
           A Q D+S  +SV +   ++  ++         + +L+NNAGI       R+  E +D+++
Sbjct: 59  AVQGDVSDAESVERAVDEAKAEF-------GGVDILVNNAGITRDNLLMRMKEEDWDRVI 111

Query: 72  STNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYP 131
            TN  G F LTK +   +       RI+N++S         Q N                
Sbjct: 112 DTNLTGVFNLTKAVARPMMKQRS-GRIINISSVVGLMGNPGQAN---------------- 154

Query: 132 CARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP-----SFLSL 186
               Y  SK  ++ F+  L R L    SR ++V A  PG ++T++   +P     + L+ 
Sbjct: 155 ----YAASKAGVIGFTKSLARELA---SRGITVNAVAPGFIETDMTDALPEDVKEAILAQ 207

Query: 187 MAFTVLKLLGLLQSPE 202
           +       LG L  PE
Sbjct: 208 IP------LGRLGQPE 217

Length = 248

>gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional

 Score = 56.2 bits (136), Expect = 2e-09
 Identities = 47/215 (21%), Positives = 78/215 (36%), Gaps = 39/215 (18%)

Query: 11  ARLEAFQVDLSSFQSVLKF--KDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPE 65
            RL   ++DLS   +   +   D L  ++  +    S  LLINNAG +      + L   
Sbjct: 45  ERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA----SRVLLINNAGTVEPIGPLATLDAA 100

Query: 66  GYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFL 125
              + +  N      LT  L     +     RI++++S   RN                 
Sbjct: 101 AIARAVGLNVAAPLMLTAALAQAA-SDAAERRILHISSGAARNA---------------- 143

Query: 126 RSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV----- 180
               Y    +Y  +K  L   +    R + LD +R + +++  PGVV T +   +     
Sbjct: 144 ----YAGWSVYCATKAALDHHA----RAVALDANRALRIVSLAPGVVDTGMQATIRATDE 195

Query: 181 PSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP 215
             F     F  LK  G L +PE     ++   L+ 
Sbjct: 196 ERFPMRERFRELKASGALSTPEDAARRLIAYLLSD 230

Length = 243

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 55.8 bits (135), Expect = 3e-09
 Identities = 49/193 (25%), Positives = 70/193 (36%), Gaps = 45/193 (23%)

Query: 4   ITSRNKDARLEAF----------QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNA 53
           IT R +  RL              +D+   +SV        + LL    + ++ +LINNA
Sbjct: 34  ITGRRE-ERLAEAKKELPNIHTIVLDVGDAESVEALA----EALLSE--YPNLDILINNA 86

Query: 54  GILA----TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV 109
           GI             +  D  + TN IG   L K  LP LK  P  + IVNV+S      
Sbjct: 87  GIQRPIDLRDPASDLDKADTEIDTNLIGPIRLIKAFLPHLKKQP-EATIVNVSS------ 139

Query: 110 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP 169
                      G  F+     P   +Y  +K  L  ++  L   L   K   V V+   P
Sbjct: 140 -----------GLAFVPMAANP---VYCATKAALHSYTLALRHQL---KDTGVEVVEIVP 182

Query: 170 GVVKTNIMREVPS 182
             V T +  E  +
Sbjct: 183 PAVDTELHEERRN 195

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|200089 TIGR01289, LPOR, light-dependent protochlorophyllide reductase

 Score = 56.0 bits (135), Expect = 4e-09
 Identities = 43/161 (26%), Positives = 66/161 (40%), Gaps = 39/161 (24%)

Query: 17  QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI---LATSSRLTPEGYDQMMST 73
            +DL S  SV +F    ++          +  L+ NA +    A   R T +G++  + T
Sbjct: 59  HLDLGSLDSVRQFVQQFRE------SGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGT 112

Query: 74  NYIGAFFLTKLLLPLLKNSPVPS-RIVNVTSFTHRNVFNAQVNNETITGKF--------- 123
           N++G F L  LLL  LKNSP    R++ V S T         N  T+ G           
Sbjct: 113 NHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSIT--------GNTNTLAGNVPPKANLGDL 164

Query: 124 ------------FLRSKCYPCARIYEYSKLCLLIFSYELHR 152
                        +  K +  A+ Y+ SK+C ++   ELHR
Sbjct: 165 SGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHR 205

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 314

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 55.4 bits (134), Expect = 6e-09
 Identities = 49/171 (28%), Positives = 69/171 (40%), Gaps = 38/171 (22%)

Query: 12  RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS---RLTPEGYD 68
           RL   Q+D++  + + +      QW+ +      +  L+NNAGIL        L  + Y 
Sbjct: 49  RLRTLQLDVTKPEQIKR----AAQWVKEHVGEKGLWGLVNNAGILGFGGDEELLPMDDYR 104

Query: 69  QMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSK 128
           + M  N  G   +TK  LPLL+ +    R+VNV+S   R  F                  
Sbjct: 105 KCMEVNLFGTVEVTKAFLPLLRRA--KGRVVNVSSMGGRVPF------------------ 144

Query: 129 CYPCARIYEYSKLCLLIFSYELHRNL---GLDKSRHVSVIAADPGVVKTNI 176
             P    Y  SK  +  FS  L R L   G+     VS+I   PG  KT I
Sbjct: 145 --PAGGAYCASKAAVEAFSDSLRRELQPWGV----KVSIIE--PGNFKTGI 187

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 54.2 bits (131), Expect = 1e-08
 Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 17/103 (16%)

Query: 11  ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSR-----LTPE 65
             +  F  D++   +     D+ Q           I  L+NNAG+     R     LTPE
Sbjct: 52  VEVIFFPADVADLSAHEAMLDAAQAAW------GRIDCLVNNAGV-GVKVRGDLLDLTPE 104

Query: 66  GYDQMMSTNYIGAFFLT----KLLLPLLKNSPVPSR-IVNVTS 103
            +D++++ N  G FFLT    K +L   +   +P R IV V+S
Sbjct: 105 SFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSS 147

Length = 256

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 54.0 bits (130), Expect = 1e-08
 Identities = 30/108 (27%), Positives = 56/108 (51%), Gaps = 17/108 (15%)

Query: 14  EAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTP---EGYDQM 70
           +A+ VD+S  Q V  F   +++          + +L NNAG+   + R+     + +D++
Sbjct: 57  KAYHVDISDEQQVKDFASEIKE------QFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKI 110

Query: 71  MSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT------HRNVFNA 112
           M+ +  G F +TK+LLPL+        I+N +SF+      +R+ +NA
Sbjct: 111 MAVDMRGTFLMTKMLLPLMMEQ--GGSIINTSSFSGQAADLYRSGYNA 156

Length = 272

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 53.5 bits (128), Expect = 2e-08
 Identities = 47/162 (29%), Positives = 70/162 (43%), Gaps = 28/162 (17%)

Query: 17  QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTN 74
           + DL+S   V K  + L+  L      S I +L+NNAGI    T    T E +D++M+ N
Sbjct: 62  EADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVN 121

Query: 75  YIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCAR 134
               FFL +  LPLL+      R++N++S   R  F   +                    
Sbjct: 122 IKAPFFLIQQTLPLLR---AEGRVINISSAEVRLGFTGSI-------------------- 158

Query: 135 IYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI 176
            Y  SK  L   +  L ++LG    R ++V    PG  KT+I
Sbjct: 159 AYGLSKGALNTMTLPLAKHLG---ERGITVNTIMPGYTKTDI 197

Length = 254

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 53.4 bits (129), Expect = 2e-08
 Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 9/97 (9%)

Query: 11  ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYD 68
            R  A   DL+   SV +F D+    L        +  L+NNAGI    +++ L  + +D
Sbjct: 56  GRAHAIAADLADPASVQRFFDAAAAAL------GGLDGLVNNAGITNSKSATELDIDTWD 109

Query: 69  QMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT 105
            +M+ N  G F + +  LP L++S    RIVN+ S T
Sbjct: 110 AVMNVNVRGTFLMLRAALPHLRDSG-RGRIVNLASDT 145

Length = 250

>gnl|CDD|177654 PLN00015, PLN00015, protochlorophyllide reductase

 Score = 53.6 bits (129), Expect = 2e-08
 Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 37/159 (23%)

Query: 19  DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNY 75
           DL+S  SV +F D+ ++    S     + +L+ NA +    A     T +G++  + TN+
Sbjct: 55  DLASLDSVRQFVDNFRR----SGR--PLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNH 108

Query: 76  IGAFFLTKLLLPLLKNSPVPS-RIVNVTSFTHR------NV---------------FNAQ 113
           +G F L++LLL  LK S  PS R++ V S T        NV                N  
Sbjct: 109 LGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGL 168

Query: 114 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHR 152
            ++  I G  F  +K       Y+ SK+C ++   E HR
Sbjct: 169 NSSAMIDGGEFDGAKA------YKDSKVCNMLTMQEFHR 201

Length = 308

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 52.8 bits (127), Expect = 2e-08
 Identities = 41/171 (23%), Positives = 62/171 (36%), Gaps = 32/171 (18%)

Query: 10  DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGY 67
              +EA   D    +      D+L+           I +L++NAGI    T    +    
Sbjct: 44  GGDVEAVPYDARDPEDARALVDALRDRF------GRIDVLVHNAGIGRPTTLREGSDAEL 97

Query: 68  DQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRS 127
           +   S N I    LT+ LLP L+ +    R+V + S               ++GK  L  
Sbjct: 98  EAHFSINVIAPAELTRALLPALREAG-SGRVVFLNS---------------LSGKRVLAG 141

Query: 128 KCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMR 178
                   Y  SK  L   ++ L R  G D    VS +   PG V T + +
Sbjct: 142 -----NAGYSASKFALRALAHAL-RQEGWDHGVRVSAVC--PGFVDTPMAQ 184

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 53.1 bits (128), Expect = 3e-08
 Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 37/165 (22%)

Query: 15  AFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI---LATSSRLTPEGYDQMM 71
             Q+D+S  +S+    ++L       +    I +L+NNAG+   L  +     E ++ M+
Sbjct: 54  PLQLDVSDRESIEAALENL------PEEFRDIDILVNNAGLALGLDPAQEADLEDWETMI 107

Query: 72  STNYIGAFFLTKLLLPLL--KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKC 129
            TN  G   +T+L+LP++  +N      I+N+ S               I G++      
Sbjct: 108 DTNVKGLLNVTRLILPIMIARNQ---GHIINLGS---------------IAGRYP----- 144

Query: 130 YPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKT 174
           Y    +Y  +K  +  FS  L ++L +     V+ I  +PG+V+T
Sbjct: 145 YAGGNVYCATKAAVRQFSLNLRKDL-IGTGIRVTNI--EPGLVET 186

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 52.8 bits (127), Expect = 3e-08
 Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 8/99 (8%)

Query: 7   RNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL--TP 64
           R K  ++E    D+SS       +  L   +        + +L+NNAG          T 
Sbjct: 51  REKGFKVEGSVCDVSSRSE----RQELMDTVASH-FGGKLNILVNNAGTNIRKEAKDYTE 105

Query: 65  EGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           E Y  +MSTN+  A+ L++L  PLLK S   + IV ++S
Sbjct: 106 EDYSLIMSTNFEAAYHLSRLAHPLLKASGNGN-IVFISS 143

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 52.8 bits (127), Expect = 3e-08
 Identities = 52/214 (24%), Positives = 80/214 (37%), Gaps = 44/214 (20%)

Query: 4   ITSRN-------KDARLE--AFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG 54
           I  RN       K    E      D++   S       L +WL     + ++ +LINNAG
Sbjct: 34  ICGRNEERLAEAKAENPEIHTEVCDVADRDSR----RELVEWLKKE--YPNLNVLINNAG 87

Query: 55  ILA----TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF 110
           I      T +    +  +Q ++TN +    LT LLLP L   P  + I+NV+S       
Sbjct: 88  IQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQP-EATIINVSS------- 139

Query: 111 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA-ADP 169
                     G  F+     P   +Y  +K  +  ++  L   L   K   V VI  A P
Sbjct: 140 ----------GLAFVPMASTP---VYCATKAAIHSYTLALREQL---KDTSVEVIELAPP 183

Query: 170 GVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEK 203
            V  T    +    + L AF       +  +P++
Sbjct: 184 LVDTTEGNTQARGKMPLSAFISETEDLVQNTPDR 217

Length = 245

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 52.0 bits (125), Expect = 5e-08
 Identities = 50/209 (23%), Positives = 82/209 (39%), Gaps = 39/209 (18%)

Query: 6   SRNKDARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL-- 62
           +   ++ L    +DL     +   F + L     D+   SSI  LINNAG++A    +  
Sbjct: 43  AEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNV--SSI-HLINNAGMVAPIKPIEK 99

Query: 63  -TPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG 121
              E     +  N +    LT   +   K+  V  R++N++S   +N             
Sbjct: 100 AESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNP------------ 147

Query: 122 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGL---DKSRHVSVIAADPGVVKTNIMR 178
                   Y     Y  SK  L +F+    + +     ++   V ++A  PGV+ TN+  
Sbjct: 148 --------YFGWSAYCSSKAGLDMFT----QTVATEQEEEEYPVKIVAFSPGVMDTNMQA 195

Query: 179 EVPS-----FLSLMAFTVLKLLGLLQSPE 202
           ++ S     F +L  F  LK  G L SPE
Sbjct: 196 QIRSSSKEDFTNLDRFITLKEEGKLLSPE 224

Length = 251

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 51.9 bits (125), Expect = 6e-08
 Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 11/101 (10%)

Query: 8   NKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSR---LTP 64
               ++     DLS ++ V +      +     D+      ++N AGI +       LT 
Sbjct: 51  ASGQKVSYISADLSDYEEVEQAFAQAVEKGGPPDL------VVNCAGI-SIPGLFEDLTA 103

Query: 65  EGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT 105
           E +++ M  NY G+  +   +LPL+K    P  IV V+S  
Sbjct: 104 EEFERGMDVNYFGSLNVAHAVLPLMK-EQRPGHIVFVSSQA 143

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score = 51.0 bits (123), Expect = 1e-07
 Identities = 22/92 (23%), Positives = 47/92 (51%), Gaps = 11/92 (11%)

Query: 15  AFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMS 72
           A + D+S  ++V    + ++           + +L+NNAGI       R++ E +D +++
Sbjct: 53  ALEADVSDREAVEALVEKVEAE------FGPVDILVNNAGITRDNLLMRMSEEDWDAVIN 106

Query: 73  TNYIGAFFLTKLLLP-LLKNSPVPSRIVNVTS 103
            N  G F +T+ ++  ++K      RI+N++S
Sbjct: 107 VNLTGVFNVTQAVIRAMIKRR--SGRIINISS 136

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 51.2 bits (123), Expect = 1e-07
 Identities = 44/175 (25%), Positives = 70/175 (40%), Gaps = 33/175 (18%)

Query: 4   ITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS--SR 61
            T  N    ++  Q+D++   S+  F+  L++          I LL+NNAG         
Sbjct: 47  ATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKE-------IGRIDLLVNNAGYANGGFVEE 99

Query: 62  LTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG 121
           +  E Y +   TN  GA  +T+ +LP ++      +I+N++S               I+G
Sbjct: 100 IPVEEYRKQFETNVFGAISVTQAVLPYMRKQK-SGKIINISS---------------ISG 143

Query: 122 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI 176
           +       +P    Y  SK  L  FS  L   L   K   + V   +PG   TNI
Sbjct: 144 RV-----GFPGLSPYVSSKYALEGFSESLRLEL---KPFGIDVALIEPGSYNTNI 190

Length = 280

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 49.9 bits (120), Expect = 1e-07
 Identities = 18/95 (18%), Positives = 39/95 (41%), Gaps = 13/95 (13%)

Query: 11  ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYD 68
           A +     D++   ++     +L        +   +  +++NAG+L       LTPE ++
Sbjct: 52  AEVTVAACDVADRDALAALLAALPA-----ALGP-LDGVVHNAGVLDDGPLEELTPERFE 105

Query: 69  QMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           ++++    GA+ L +L   L          V  +S
Sbjct: 106 RVLAPKVTGAWNLHELTRDLDL-----GAFVLFSS 135

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 50.5 bits (121), Expect = 2e-07
 Identities = 42/136 (30%), Positives = 59/136 (43%), Gaps = 29/136 (21%)

Query: 46  IQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           + +L+NNAGILA         E YD++M+ N     +LTKL +P L  +     IVNV+S
Sbjct: 84  LDILVNNAGILAKGGGEDQDIEEYDKVMNLNLRAVIYLTKLAVPHLIKT--KGEIVNVSS 141

Query: 104 FTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRH-V 162
                          + G    RS  +P    Y  SK  L  F+    R   L+ +   V
Sbjct: 142 ---------------VAGG---RS--FPGVLYYCISKAALDQFT----RCTALELAPKGV 177

Query: 163 SVIAADPGVVKTNIMR 178
            V +  PGV+ T   R
Sbjct: 178 RVNSVSPGVIVTGFHR 193

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 49.7 bits (119), Expect = 4e-07
 Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 9/105 (8%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSR 61
           A   +R   A++ A   D++    V +  D+  +     D      +L+NNAGI   +  
Sbjct: 49  AATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLD------VLVNNAGIAGPTGG 102

Query: 62  ---LTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
              +TPE ++Q ++ N  G F+  +  +PLLK S     I+ ++S
Sbjct: 103 IDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSS 147

Length = 264

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 49.4 bits (119), Expect = 4e-07
 Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 9/95 (9%)

Query: 11  ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYD 68
                   D+S   +V   +  ++      +   ++ +L+NNAGI   A   R++ E +D
Sbjct: 54  GEARVLVFDVSDEAAV---RALIEA---AVEAFGALDILVNNAGITRDALLPRMSEEDWD 107

Query: 69  QMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           +++  N  G F + +  LP +  +    RIVN++S
Sbjct: 108 RVIDVNLTGTFNVVRAALPPMIKARY-GRIVNISS 141

Length = 246

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 49.2 bits (118), Expect = 5e-07
 Identities = 51/216 (23%), Positives = 79/216 (36%), Gaps = 42/216 (19%)

Query: 17  QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMST 73
           + DLS    V +  +++++      +     LLINNAG L   S++     +   +    
Sbjct: 55  KADLSDAAGVEQLLEAIRK------LDGERDLLINNAGSLGPVSKIEFIDLDELQKYFDL 108

Query: 74  NYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCA 133
           N      LT  LL   K   +   +VNV+S    N F                       
Sbjct: 109 NLTSPVCLTSTLLRAFKKRGLKKTVVNVSSGAAVNPFKGWG------------------- 149

Query: 134 RIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV------PSFLSLM 187
            +Y  SK    +F     R L  ++   V V++  PGVV T++ RE+      P   S  
Sbjct: 150 -LYCSSKAARDMFF----RVLAAEEPD-VRVLSYAPGVVDTDMQREIRETSADPETRSR- 202

Query: 188 AFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYF 223
            F  LK  G L  PE+    + +        SG + 
Sbjct: 203 -FRSLKEKGELLDPEQSAEKLANLLEKDKFESGAHV 237

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 48.8 bits (117), Expect = 6e-07
 Identities = 52/219 (23%), Positives = 89/219 (40%), Gaps = 40/219 (18%)

Query: 7   RNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSS--IQLLINNAGI--LATSSRL 62
                +  A Q D+S    V +        L D+   +   + +L+NNAG+      +  
Sbjct: 49  EAAGGKAIAVQADVSDPSQVAR--------LFDAAEKAFGGVDILVNNAGVMLKKPIAET 100

Query: 63  TPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGK 122
           + E +D+M + N  GAFF+ +     L++     RI+N++S              ++T  
Sbjct: 101 SEEEFDRMFTVNTKGAFFVLQEAAKRLRDG---GRIINISS--------------SLTAA 143

Query: 123 FFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS 182
           +       P    Y  SK  +  F+  L + LG    R ++V A  PG V T++     +
Sbjct: 144 Y------TPNYGAYAGSKAAVEAFTRVLAKELG---GRGITVNAVAPGPVDTDMFYAGKT 194

Query: 183 FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGV 221
             ++  +  +  LG L  PE     V  A LA P+   V
Sbjct: 195 EEAVEGYAKMSPLGRLGEPEDIAPVV--AFLASPDGRWV 231

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 48.9 bits (116), Expect = 6e-07
 Identities = 46/173 (26%), Positives = 75/173 (43%), Gaps = 30/173 (17%)

Query: 14  EAFQV--DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQ 69
            AF +  +L S   V     SL   L +    +   +LINNAGI   A     T + +D+
Sbjct: 55  SAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDR 114

Query: 70  MMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKC 129
           M+S N    FF+ +  L  L+++   SRI+N++S   R                      
Sbjct: 115 MVSVNAKAPFFIIQQALSRLRDN---SRIINISSAATRISL------------------- 152

Query: 130 YPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS 182
            P    Y  +K  +   ++ L + LG   +R ++V A  PG +KT++  E+ S
Sbjct: 153 -PDFIAYSMTKGAINTMTFTLAKQLG---ARGITVNAILPGFIKTDMNAELLS 201

Length = 252

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 49.1 bits (117), Expect = 9e-07
 Identities = 35/169 (20%), Positives = 63/169 (37%), Gaps = 33/169 (19%)

Query: 15  AFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLT----PEGYDQM 70
           A  +D+S    + +  + L +          I +L+NNAG+   +   T     E + ++
Sbjct: 55  ALAMDVSDEAQIREGFEQLHR------EFGRIDVLVNNAGVTDPTMTATLDTTLEEFARL 108

Query: 71  MSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCY 130
            + N  GA+ + +  L L+      + IVNV S          V                
Sbjct: 109 QAINLTGAYLVAREALRLMIEQGHGAAIVNVASGA------GLVAL-------------- 148

Query: 131 PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE 179
           P    Y  SK  ++  +  L        ++ + V A  PG V+T ++ E
Sbjct: 149 PKRTAYSASKAAVISLTRSLACEWA---AKGIRVNAVLPGYVRTQMVAE 194

Length = 520

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 48.3 bits (116), Expect = 1e-06
 Identities = 45/181 (24%), Positives = 71/181 (39%), Gaps = 42/181 (23%)

Query: 4   ITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI----LATS 59
           I     DA   A + D+SS + V    + +       +    I +L+NNAGI    L T 
Sbjct: 50  IKEEGGDA--IAVKADVSSEEDVENLVEQI------VEKFGKIDILVNNAGISNFGLVTD 101

Query: 60  SRLTPEGYDQMMSTNYIGAFFLTKLLLPLL--KNSPVPSRIVNVTSFTHRNVFNAQVNNE 117
             +T E +D+++  N  G   LT+  LP +  + S V   IVN++S              
Sbjct: 102 --MTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGV---IVNISS-------------- 142

Query: 118 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIM 177
                         C  +Y  SK  +  F+  L + L     R V+ +A  PG + T + 
Sbjct: 143 --IWGLI--GA--SCEVLYSASKGAVNAFTKALAKELAPSGIR-VNAVA--PGAIDTEMW 193

Query: 178 R 178
            
Sbjct: 194 S 194

Length = 247

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 48.2 bits (115), Expect = 1e-06
 Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 11/69 (15%)

Query: 45  SIQLLINNAGILATSSRL---TPEGYDQMMSTNYIGAFFLT----KLLLPLLKNSP---V 94
           +I +L+NN+G+ +T+ +L   TP  +D +  TN  GAFF+     K ++   K +     
Sbjct: 86  TIDILVNNSGV-STTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKP 144

Query: 95  PSRIVNVTS 103
             RI+N+ S
Sbjct: 145 GGRIINIAS 153

Length = 258

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 47.7 bits (114), Expect = 1e-06
 Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 12/116 (10%)

Query: 4   ITSRNKDARLEAFQVDLSSFQSVLKFK------DSLQQWLLDSDMH-SSIQLLINNAGI- 55
           IT+R++   LE    +L++  +VL           +Q+ +         + +LI NAG+ 
Sbjct: 35  ITARDQK-ELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLDVLIANAGVG 93

Query: 56  -LATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF 110
             A    LTPE +  ++ TN  GAF+  K  +P LK       I+N++S    N F
Sbjct: 94  HFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRG--GGYIINISSLAGTNFF 147

Length = 237

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 46.5 bits (111), Expect = 5e-06
 Identities = 45/200 (22%), Positives = 74/200 (37%), Gaps = 56/200 (28%)

Query: 4   ITSRNKDARLEA---------------FQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQL 48
           + +R +D +LEA                  DLS  +++ + +D L++          I +
Sbjct: 35  LVARRED-KLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGGP------IDV 87

Query: 49  LINNAGILATSSR---LTPEGYDQMMSTNYIGAFFLTKLLLP-LLKNSPVPSRIVNVTSF 104
           L+NNAG   T      L+ +  ++M+  N +    LTK +LP +++       I+N+ S 
Sbjct: 88  LVNNAGF-GTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG--AGHIINIGS- 143

Query: 105 THRNVFNAQVNNETITGKFFLRSKCYPCAR--IYEYSKLCLLIFSYELHRNLGLDKSRHV 162
                           G         P     +Y  +K  +L FS  L   L   K   V
Sbjct: 144 --------------AAGL-------IPTPYMAVYSATKAFVLSFSEALREEL---KGTGV 179

Query: 163 SVIAADPGVVKTNIMREVPS 182
            V A  PG  +T       S
Sbjct: 180 KVTAVCPGPTRTEFFDAKGS 199

Length = 265

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 46.1 bits (110), Expect = 5e-06
 Identities = 33/174 (18%), Positives = 63/174 (36%), Gaps = 37/174 (21%)

Query: 15  AFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMS 72
            ++ D+S  + V +    +++ + D      + +LINNAG+++      L  E  ++   
Sbjct: 52  YYKCDVSKREEVYEAAKKIKKEVGD------VTILINNAGVVSGKKLLELPDEEIEKTFE 105

Query: 73  TNYIGAFFLTKLLLPLL--KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCY 130
            N +  F+ TK  LP +  +N      IV + S               + G         
Sbjct: 106 VNTLAHFWTTKAFLPDMLERNHG---HIVTIAS---------------VAGLI------- 140

Query: 131 PCARIYEY--SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS 182
             A + +Y  SK   + F   L   L       +      P  + T + + V +
Sbjct: 141 SPAGLADYCASKAAAVGFHESLRLELKAYGKPGIKTTLVCPYFINTGMFQGVKT 194

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 45.8 bits (109), Expect = 7e-06
 Identities = 47/216 (21%), Positives = 82/216 (37%), Gaps = 50/216 (23%)

Query: 16  FQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS----RLTPEGYDQM 70
            Q D++S++ +   FK ++       +    + +LINNAGIL   S       P  +++ 
Sbjct: 54  VQCDVTSWEQLAAAFKKAI-------EKFGRVDILINNAGILDEKSYLFAGKLPPPWEKT 106

Query: 71  MSTNYIGAFFLTKLLLPLLK--NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSK 128
           +  N  G    T L L  +          IVN+ S               + G       
Sbjct: 107 IDVNLTGVINTTYLALHYMDKNKGGKGGVIVNIGS---------------VAG------- 144

Query: 129 CYPCAR--IYEYSKLCLLIFSYELHRNLG-LDKSRH-VSVIAADPGVVKTNIMREVPSFL 184
            YP  +  +Y  SK  ++ F+    R+L  L + +  V V A  PG   T ++ ++ +  
Sbjct: 145 LYPAPQFPVYSASKHGVVGFT----RSLADLLEYKTGVRVNAICPGFTNTPLLPDLVAKE 200

Query: 185 SLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSG 220
           + M           QSPE  +   +   +   E +G
Sbjct: 201 AEML-----PSAPTQSPEV-VAKAIVYLIEDDEKNG 230

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 45.7 bits (109), Expect = 7e-06
 Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 10/94 (10%)

Query: 12  RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQ 69
           R      DL+S           ++          I +LINNAG+   A      PE  ++
Sbjct: 54  RHRWVVADLTSEAGREAVLARARE-------MGGINVLINNAGVNHFALLEDQDPEAIER 106

Query: 70  MMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           +++ N      LT+ LLPLL+  P  + +VNV S
Sbjct: 107 LLALNLTAPMQLTRALLPLLRAQPS-AMVVNVGS 139

Length = 263

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 45.9 bits (109), Expect = 8e-06
 Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 14/112 (12%)

Query: 4   ITSRNKDARLEAFQVDLSSFQSVLKF--------KDSLQQWLLD--SDMHSSIQLLINNA 53
           I +R+ DA L   + +L+      +          D  ++ +LD   D    + +L+NNA
Sbjct: 38  IVARDADA-LAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWDGLHILVNNA 96

Query: 54  GILATSSRL--TPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           G     + +  T + +  +  TN   AF L++   PLLK     S IVN+ S
Sbjct: 97  GGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHA-SSAIVNIGS 147

Length = 257

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 45.5 bits (108), Expect = 9e-06
 Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 12/93 (12%)

Query: 13  LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG--ILATSSRLTPEGYDQM 70
           +E   VDLS + +  +   S             + LL+NNA   IL     +T E +D+ 
Sbjct: 54  IEPVCVDLSDWDATEEALGS----------VGPVDLLVNNAAVAILQPFLEVTKEAFDRS 103

Query: 71  MSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
              N      +++++   +    VP  IVNV+S
Sbjct: 104 FDVNVRAVIHVSQIVARGMIARGVPGSIVNVSS 136

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 3/51 (5%)

Query: 49  LINNAGILATSS---RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPS 96
           +++NAG+L       +  PE +  +M  N    F LT+ LLPLL  SP  S
Sbjct: 96  VLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAAS 146

Length = 247

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 44.5 bits (106), Expect = 2e-05
 Identities = 25/119 (21%), Positives = 42/119 (35%), Gaps = 22/119 (18%)

Query: 4   ITSRNKD--------------ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLL 49
           I  R  +               R    Q D+   ++V    D              I +L
Sbjct: 32  IAGRKPEVLEAAAEEISSATGGRAHPIQCDVRDPEAVEAAVDETL------KEFGKIDIL 85

Query: 50  INNAG--ILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH 106
           INNA    LA +  L+P G+  ++  +  G F  TK +   L  +     I+N+++   
Sbjct: 86  INNAAGNFLAPAESLSPNGFKTVIDIDLNGTFNTTKAVGKRLIEAKHGGSILNISATYA 144

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 44.4 bits (105), Expect = 2e-05
 Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 5/69 (7%)

Query: 40  SDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPV--- 94
           ++    + +L+NNAG    A        G+D++M  N    FFLT+ LLPLL+ +     
Sbjct: 77  AERSDRLDVLVNNAGATWGAPLEAFPESGWDKVMDINVKSVFFLTQALLPLLRAAATAEN 136

Query: 95  PSRIVNVTS 103
           P+R++N+ S
Sbjct: 137 PARVINIGS 145

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 44.1 bits (105), Expect = 3e-05
 Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 4/63 (6%)

Query: 44  SSIQLLINNAGILATSSRL---TPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVN 100
           S + +L+NNAGI  T S L     +     M TNY G   + +   P+L  +     IVN
Sbjct: 72  SDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANG-GGAIVN 130

Query: 101 VTS 103
           V S
Sbjct: 131 VLS 133

Length = 238

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 42.9 bits (101), Expect = 6e-05
 Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 5/69 (7%)

Query: 45  SIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAFFLT-KLLLPLLKNSPVPSRIVNV 101
            +  L+NNAG+  +     LTPE +  ++ TN  GAF+   K    LL+       IVNV
Sbjct: 74  GLDALVNNAGVGVMKPVEELTPEEWRLVLDTNLTGAFYCIHKAAPALLRRG--GGTIVNV 131

Query: 102 TSFTHRNVF 110
            S   +N F
Sbjct: 132 GSLAGKNAF 140

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 42.8 bits (101), Expect = 6e-05
 Identities = 21/96 (21%), Positives = 40/96 (41%), Gaps = 14/96 (14%)

Query: 11  ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYD-- 68
            ++   ++D++  +S+                   + ++INNAG+L  ++ L     +  
Sbjct: 50  DKVVPLRLDVTDPESIKAAAAQA----------KDVDVVINNAGVLKPATLLEEGALEAL 99

Query: 69  -QMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
            Q M  N  G   L +   P+LK +     IVN+ S
Sbjct: 100 KQEMDVNVFGLLRLAQAFAPVLKANG-GGAIVNLNS 134

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs

 Score = 42.5 bits (100), Expect = 1e-04
 Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 20/127 (15%)

Query: 49  LINNAGILATSSRLTP-EGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR 107
           +I+NAGIL+  +R TP  G   M++ N +  + LT L+         P R++ ++S  HR
Sbjct: 84  VIHNAGILSGPNRKTPDTGIPAMVAVNVLAPYVLTALIRR-------PKRLIYLSSGMHR 136

Query: 108 NVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA 167
                   N ++       ++    +  Y  SKL +L  +  + R     + + VS  A 
Sbjct: 137 GG------NASLDD-IDWFNRGENDSPAYSDSKLHVLTLAAAVAR-----RWKDVSSNAV 184

Query: 168 DPGVVKT 174
            PG V T
Sbjct: 185 HPGWVPT 191

Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 42.0 bits (99), Expect = 1e-04
 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 3/60 (5%)

Query: 46  IQLLINNAGILATSSRL-TP-EGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           + +L+NNAG +  S    TP + +D M   N  G + L++  LP +  +     I+N++ 
Sbjct: 93  LDILVNNAGAIWLSLVEDTPAKRFDLMQRVNLRGTYLLSQAALPHMVKAGQG-HILNISP 151

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 42.4 bits (100), Expect = 1e-04
 Identities = 52/237 (21%), Positives = 85/237 (35%), Gaps = 45/237 (18%)

Query: 9   KDARLEAFQVDLSSFQSVLKFKDSLQQ---------------------WL------LDSD 41
                +   VDLS+  SV      L++                     W+      L + 
Sbjct: 57  ARVVFDYVLVDLSNMVSVFAAAKELKKRYPRLDYLYLNAGIMPNPGIDWIGAIKEVLTNP 116

Query: 42  MHS--SIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIV 99
           + +  +    I   G+L+   + T +G  ++  TN  G ++L + L PLL  S   S+I+
Sbjct: 117 LFAVTNPTYKIQAEGLLSQGDKATEDGLGEVFQTNVFGHYYLIRELEPLLCRSDGGSQII 176

Query: 100 NVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKS 159
             +S       NA     ++     L+         Y  SK  + + S  L+R       
Sbjct: 177 WTSS------LNASPKYFSLEDIQHLKGP-----APYSSSKYLVDLLSLALNRKF---NK 222

Query: 160 RHVSVIAADPGVVKTNIMRE-VPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP 215
             V      PG+  TN+    +P F   +A  +  LL  L SP   I S  + A A 
Sbjct: 223 LGVYSYVVHPGICTTNLTYGILPPFTWTLALPLFYLLRRLGSPWHTI-SPYNGAEAL 278

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 30/110 (27%), Positives = 44/110 (40%), Gaps = 21/110 (19%)

Query: 6   SRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD---SDMHSSIQLLINNAGILATSSR- 61
                 R   FQ D+           S  + LLD    D    +  L+NNAGI       
Sbjct: 46  VLAAGRRAIYFQADIGEL--------SDHEALLDQAWEDFGR-LDCLVNNAGIAVRPRGD 96

Query: 62  ---LTPEGYDQMMSTNYIGAFFLT----KLLLPLLKNSPVPSR-IVNVTS 103
              LT + +D++++ N  G FFLT    + ++        P R I+ VTS
Sbjct: 97  LLDLTEDSFDRLIAINLRGPFFLTQAVARRMVEQPDRFDGPHRSIIFVTS 146

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 41.7 bits (98), Expect = 2e-04
 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 4/64 (6%)

Query: 43  HSSIQLLINNAGILATSSRL---TPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIV 99
              + LL+NNAG +  +  +       +DQ M+ N  G F   +   P +      S IV
Sbjct: 75  FGGLDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGTFLCCRHAAPRMIARGGGS-IV 133

Query: 100 NVTS 103
           N++S
Sbjct: 134 NLSS 137

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 9/92 (9%)

Query: 14  EAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMM 71
              + D+ +   V K K+ +++          + +L+NNAGI+          E Y++M+
Sbjct: 54  FTIKCDVGNRDQVKKSKEVVEKEF------GRVDVLVNNAGIMYLMPFEEFDEEKYNKMI 107

Query: 72  STNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
             N  GA + T   LPLLK S   + IVN+ S
Sbjct: 108 KINLNGAIYTTYEFLPLLKLSKNGA-IVNIAS 138

Length = 255

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 3/75 (4%)

Query: 43  HSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVN 100
              + +L+NNAGI   S   R++ + ++ +++TN    F +T+ L   +       RI+N
Sbjct: 78  EGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGY-GRIIN 136

Query: 101 VTSFTHRNVFNAQVN 115
           ++S         Q N
Sbjct: 137 ISSVNGLKGQFGQTN 151

Length = 245

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 41.0 bits (96), Expect = 3e-04
 Identities = 32/131 (24%), Positives = 49/131 (37%), Gaps = 26/131 (19%)

Query: 46  IQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           + +L+NNAGI  L          + +M+ TN +G  + T   LP          IVN++S
Sbjct: 81  LDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYTTHAALPHHLLRNK-GTIVNISS 139

Query: 104 FTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVS 163
              R                         + +Y  +K  +  FS  L + +     R V 
Sbjct: 140 VAGRVA--------------------VRNSAVYNATKFGVNAFSEGLRQEVTERGVR-VV 178

Query: 164 VIAADPGVVKT 174
           VI  +PG V T
Sbjct: 179 VI--EPGTVDT 187

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 41.1 bits (97), Expect = 3e-04
 Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)

Query: 46  IQLLINNAGILATS---SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVT 102
           I +L+NNAGI   S          ++++M  NY+GA + T   LP LK S    +IV V+
Sbjct: 79  IDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS--RGQIVVVS 136

Query: 103 SFT 105
           S  
Sbjct: 137 SLA 139

Length = 263

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 40.9 bits (96), Expect = 3e-04
 Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 3/59 (5%)

Query: 46  IQLLINNA-GILATSSRLTP-EGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVT 102
           I +L+NNA  I  T +  TP + YD MM  N  G +  +K  LP LK S  P  I+N++
Sbjct: 88  IDILVNNASAISLTGTLDTPMKRYDLMMGVNTRGTYLCSKACLPYLKKSKNP-HILNLS 145

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 41.0 bits (97), Expect = 3e-04
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 3/61 (4%)

Query: 45  SIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVT 102
            + +L+NNAGI  +A       E + +M++    GAF  TK  LP++K      RI+N+ 
Sbjct: 81  GVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGG-GRIINMA 139

Query: 103 S 103
           S
Sbjct: 140 S 140

Length = 258

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 41.0 bits (96), Expect = 3e-04
 Identities = 24/96 (25%), Positives = 48/96 (50%), Gaps = 9/96 (9%)

Query: 10  DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS-RLTPEG-Y 67
              ++ F+VD+S+ + V+K  D +         +  I +L+NNAGI +  +     E  +
Sbjct: 43  YNDVDYFKVDVSNKEQVIKGIDYV------ISKYGRIDILVNNAGIESYGAIHAVEEDEW 96

Query: 68  DQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           D++++ N  G F ++K  +P +        I+N+ S
Sbjct: 97  DRIINVNVNGIFLMSKYTIPYMLKQDKGV-IINIAS 131

Length = 258

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 40.9 bits (96), Expect = 3e-04
 Identities = 47/215 (21%), Positives = 75/215 (34%), Gaps = 40/215 (18%)

Query: 11  ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYD 68
            +      D+  F +     D+        +    + +L+NNAGI   A  + L+ E +D
Sbjct: 59  GKALGLAFDVRDFAATRAALDA------GVEEFGRLDILVNNAGIATDAAFAELSIEEWD 112

Query: 69  QMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSK 128
            ++  N  G F +T+  LP +  +    RIVN+ S         QVN             
Sbjct: 113 DVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVN------------- 159

Query: 129 CYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMA 188
                  Y  SK  L+  +  L   L     R ++V A  PG + T +            
Sbjct: 160 -------YAASKAGLIGLTKTLANELA---PRGITVNAVAPGAINTPMADNAA-----PT 204

Query: 189 FTVLKL--LGLLQSPEKGINSVLDAALAPPETSGV 221
             +L    +  L  P++    V  A L     S V
Sbjct: 205 EHLLNPVPVQRLGEPDEVAALV--AFLVSDAASYV 237

Length = 249

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 40.4 bits (95), Expect = 4e-04
 Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 3/60 (5%)

Query: 46  IQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           I +L+NNAGI     +       +  ++  N  G FF+++ +   +       +I+N+ S
Sbjct: 83  IDILVNNAGIIRRHPAEEFPEAEWRDVIDVNLNGVFFVSQAVARHMIKQGHG-KIINICS 141

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 40.6 bits (96), Expect = 4e-04
 Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 27/138 (19%)

Query: 45  SIQLLINNAGI-LATSSRL--TPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNV 101
           S+ +L+NNAG        L      +D++ + N    +  T+  +P ++     + IVNV
Sbjct: 81  SVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGA-IVNV 139

Query: 102 TSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRH 161
            S                 G   LR +  P    Y  SK  ++  +  L   LG DK R 
Sbjct: 140 AS---------------TAG---LRPR--PGLGWYNASKGAVITLTKALAAELGPDKIR- 178

Query: 162 VSVIAADPGVVKTNIMRE 179
           V+ +A  P VV+T ++  
Sbjct: 179 VNAVA--PVVVETGLLEA 194

Length = 251

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 40.4 bits (95), Expect = 5e-04
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 6/66 (9%)

Query: 43  HSSIQLLINNAGILATSSRL---TPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIV 99
              + +L+NNA        +   T E  ++   TN    F+LTK  LP LK     S I+
Sbjct: 103 FGKLDILVNNAAYQHPQESIEDITTEQLEKTFRTNIFSMFYLTKAALPHLKKG---SSII 159

Query: 100 NVTSFT 105
           N TS T
Sbjct: 160 NTTSVT 165

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 39.9 bits (94), Expect = 5e-04
 Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 56/199 (28%)

Query: 4   ITSRNKDARLEA--------------FQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLL 49
           IT R+ +   E                  D+S  + V    + ++      +    I +L
Sbjct: 27  ITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIE------EELGPIDIL 80

Query: 50  INNAGI----LATSSRLTPEGYDQMMSTNYIGAFFLTKLLL-PLLKNSPVPSRIVNVTSF 104
           +NNAGI    L    R+  E +D ++ TN  G F LT+ +L  ++K      RI+N++S 
Sbjct: 81  VNNAGITRDNLLM--RMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQR--SGRIINISSV 136

Query: 105 T--HRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHV 162
                N    Q N                    Y  SK  ++ F+  L + L    SR++
Sbjct: 137 VGLMGNA--GQAN--------------------YAASKAGVIGFTKSLAKELA---SRNI 171

Query: 163 SVIAADPGVVKTNIMREVP 181
           +V A  PG + T++  ++ 
Sbjct: 172 TVNAVAPGFIDTDMTDKLS 190

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 40.7 bits (96), Expect = 6e-04
 Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 23/107 (21%)

Query: 7   RNKDARLEAFQVDLSSFQSVLKF-KDSLQQWLLDSDMHSSIQLLINNAG------ILATS 59
           R K     A+  DL+   +V    KD L +       H  +  L+NNAG      +  ++
Sbjct: 416 RAKGGTAHAYTCDLTDSAAVDHTVKDILAE-------HGHVDYLVNNAGRSIRRSVENST 468

Query: 60  SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSR---IVNVTS 103
            R     Y++ M+ NY GA  L   LLP         R   +VNV+S
Sbjct: 469 DRF--HDYERTMAVNYFGAVRLILGLLP----HMRERRFGHVVNVSS 509

Length = 657

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 40.3 bits (95), Expect = 7e-04
 Identities = 39/173 (22%), Positives = 62/173 (35%), Gaps = 45/173 (26%)

Query: 15  AFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI------LATSSRLTPEGYD 68
           A++VD+S   ++  F + +         H    +++NNAGI      L T    + E +D
Sbjct: 368 AYRVDVSDADAMEAFAEWV------RAEHGVPDIVVNNAGIGMAGGFLDT----SAEDWD 417

Query: 69  QMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS---FTHRNVFNAQVNNETITGKFFL 125
           +++  N  G     +L    +        IVNV S   +       A             
Sbjct: 418 RVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPA------------- 464

Query: 126 RSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMR 178
                     Y  SK  +L+ S  L   L    +  + V A  PG V TNI+ 
Sbjct: 465 ----------YATSKAAVLMLSECLRAELA---AAGIGVTAICPGFVDTNIVA 504

Length = 582

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 39.6 bits (93), Expect = 8e-04
 Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 3/60 (5%)

Query: 46  IQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           + +L+NNAGIL   S  +++ E +D +M  +  G+F +T+   P ++      RI+N +S
Sbjct: 89  VDILVNNAGILRDRSFAKMSEEDWDLVMRVHLKGSFKVTRAAWPYMRKQKF-GRIINTSS 147

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 39.3 bits (92), Expect = 9e-04
 Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 7/63 (11%)

Query: 45  SIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAFFLTKLLLPLL--KNSPVPSRIVN 100
           SI +LINNAGI        L P  +++++  N +G ++ T+ +LP +  + S     I+N
Sbjct: 84  SIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQS---GDIIN 140

Query: 101 VTS 103
           ++S
Sbjct: 141 ISS 143

Length = 239

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 39.1 bits (92), Expect = 0.001
 Identities = 49/198 (24%), Positives = 74/198 (37%), Gaps = 64/198 (32%)

Query: 4   ITSRNKDARLEA---------------FQVDLSSFQSVLKF-KDSLQQWLLDSDMHSSIQ 47
           +++R ++ RLE                  +D+S  +   +  +++L+ +         + 
Sbjct: 32  LSARREE-RLEEVKSECLELGAPSPHVVPLDMSDLEDAEQVVEEALKLF-------GGLD 83

Query: 48  LLINNAGILATSSRLTPEGYD---QMMSTNYIGAFFLTKLLLPLLKNSPVPSR--IVNVT 102
           +LINNAGI +  S       D   ++M  NY G   LTK  LP L      S+  IV V+
Sbjct: 84  ILINNAGI-SMRSLFHDTSIDVDRKIMEVNYFGPVALTKAALPHLIER---SQGSIVVVS 139

Query: 103 SFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFS----YELHRNLGLDK 158
           S               I GK        P    Y  SK  L  F      EL        
Sbjct: 140 S---------------IAGKI-----GVPFRTAYAASKHALQGFFDSLRAELS------- 172

Query: 159 SRHVSVIAADPGVVKTNI 176
             ++SV    PG++ TNI
Sbjct: 173 EPNISVTVVCPGLIDTNI 190

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 39.0 bits (91), Expect = 0.001
 Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 3/65 (4%)

Query: 43  HSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVN 100
              +  L+N AG     T +    + +D+M   N       +K  LP L  S    RIVN
Sbjct: 80  FGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGG-GRIVN 138

Query: 101 VTSFT 105
           + +  
Sbjct: 139 IGAGA 143

Length = 239

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 39.1 bits (92), Expect = 0.001
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 2/52 (3%)

Query: 46  IQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVP 95
           I + +NNA    L  +     + +D M   N  G F +++  LP LK S  P
Sbjct: 91  IDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENP 142

Length = 273

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 38.8 bits (91), Expect = 0.001
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)

Query: 49  LINNAGILATSSRL--TPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           L+N AG+    + L  +PE +D+  + N    FFL +  + L++       IVN+ S
Sbjct: 88  LVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGS 144

Length = 260

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 3/61 (4%)

Query: 45  SIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVT 102
            + +L+NNAGI  +A      PE +D++++     AF   +  LP +K      RI+N+ 
Sbjct: 78  GLDILVNNAGIQHVAPIEEFPPEDWDRIIAVMLTSAFHTIRAALPHMKKQGW-GRIINIA 136

Query: 103 S 103
           S
Sbjct: 137 S 137

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 38.7 bits (90), Expect = 0.002
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 5/61 (8%)

Query: 49  LINNAGILATS---SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT 105
           +++NAG+L      S   P+ +  +   N    F LT+ LLPLL  S   S +   TS +
Sbjct: 88  VLHNAGLLGDVCPLSEQNPQVWQDVXQVNVNATFMLTQALLPLLLKSDAGSLV--FTSSS 145

Query: 106 H 106
            
Sbjct: 146 V 146

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 5/54 (9%)

Query: 52  NAGI--LATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           NAG+   A         +D+  +TN  G +FL + LLPLL N   P+ IV   S
Sbjct: 87  NAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN---PASIVLNGS 137

Length = 249

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 25/117 (21%), Positives = 49/117 (41%), Gaps = 22/117 (18%)

Query: 4   ITSRNKD-------------ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLI 50
           I +RN++             A + A   DL+  + + +    +++     D    + +L+
Sbjct: 30  ICARNRENLERAASELRAGGAGVLAVVADLTDPEDIDRL---VEKAG---DAFGRVDILV 83

Query: 51  NNAG--ILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT 105
           NNAG       + LT E + +      +    + + +LP +K      RIVN++S T
Sbjct: 84  NNAGGPPPGPFAELTDEDWLEAFDLKLLSVIRIVRAVLPGMKERGWG-RIVNISSLT 139

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 38.1 bits (89), Expect = 0.002
 Identities = 39/170 (22%), Positives = 62/170 (36%), Gaps = 32/170 (18%)

Query: 50  INNAGILATSSRL---TPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS-FT 105
           +NNAG+ A   R    TPE + ++   NY+G  + T   LP L+       ++NV S   
Sbjct: 82  VNNAGV-AVFGRFEDVTPEEFRRVFDVNYLGHVYGTLAALPHLRRR-GGGALINVGSLLG 139

Query: 106 HRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVI 165
           +R+                      P    Y  SK  +  F+  L   L  D    +SV 
Sbjct: 140 YRSA---------------------PLQAAYSASKHAVRGFTESLRAELAHDG-APISVT 177

Query: 166 AADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP 215
              P  + T       S++        K    +  PE+   +++ AA  P
Sbjct: 178 LVQPTAMNTPFFGHARSYMG----KKPKPPPPIYQPERVAEAIVRAAEHP 223

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 37.7 bits (88), Expect = 0.003
 Identities = 18/84 (21%), Positives = 39/84 (46%), Gaps = 8/84 (9%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATS 59
           A++ ++      +    D+S  QSV     ++            I +L+N+AG+  LA +
Sbjct: 52  AEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVIS------AFGRIDILVNSAGVALLAPA 105

Query: 60  SRLTPEGYDQMMSTNYIGAFFLTK 83
             ++ E +D+ +  N  G+F + +
Sbjct: 106 EDVSEEDWDKTIDINLKGSFLMAQ 129

Length = 255

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 37.6 bits (88), Expect = 0.003
 Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 11/107 (10%)

Query: 7   RNKDARLEAFQVDLSSFQSVL-KFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL-TP 64
           R+   +  A+ +DLS+ +++     + L+Q+           +LINNAG+  T   L  P
Sbjct: 51  RSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC-------PDVLINNAGMAYTGPLLEMP 103

Query: 65  -EGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF 110
              +  ++  N    F     +LP ++       I+NV+S   RN F
Sbjct: 104 LSDWQWVIQLNLTSVFQCCSAVLPGMRARG-GGLIINVSSIAARNAF 149

Length = 241

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 37.7 bits (88), Expect = 0.003
 Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 6/61 (9%)

Query: 48  LLINNAGILATSSR---LTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF 104
           +L+NNA           +T E  D+   TN    F +TK  LP LK     S I+N  S 
Sbjct: 127 ILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQG---SAIINTGSI 183

Query: 105 T 105
           T
Sbjct: 184 T 184

Length = 290

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 38.3 bits (90), Expect = 0.004
 Identities = 24/118 (20%), Positives = 45/118 (38%), Gaps = 29/118 (24%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSR 61
            D+T     A   AF+      ++ L F                + ++++NAGI A S  
Sbjct: 477 CDVTDE--AAVQAAFE------EAALAF--------------GGVDIVVSNAGI-AISGP 513

Query: 62  L---TPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN 116
           +   + E + +    N  G F + +  + ++K   +   IV + S   +N  N   N 
Sbjct: 514 IEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIAS---KNAVNPGPNF 568

Length = 681

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 37.8 bits (88), Expect = 0.004
 Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 3/60 (5%)

Query: 46  IQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           + +L+NNAGI  +A       E +D +++ N    F  T+L LP +K      RI+N+ S
Sbjct: 82  VDILVNNAGIQHVAPIEDFPTEKWDAIIALNLSAVFHTTRLALPHMKKQGW-GRIINIAS 140

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 37.4 bits (87), Expect = 0.004
 Identities = 48/205 (23%), Positives = 78/205 (38%), Gaps = 36/205 (17%)

Query: 15  AFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMS 72
           A Q D++   +V +  D+ +           I +L+NNAG+  L T +    E +D+ ++
Sbjct: 59  AVQADVADAAAVTRLFDAAETAF------GRIDVLVNNAGVMPLGTIADFDLEDFDRTIA 112

Query: 73  TNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPC 132
           TN  GAF + +     L       RI+N+++                           P 
Sbjct: 113 TNLRGAFVVLREAARHLGQG---GRIINLSTSVIALPL--------------------PG 149

Query: 133 ARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL 192
              Y  SK  +    + L   L     R ++V A  PG V T +     S   +     L
Sbjct: 150 YGPYAASKAAVEGLVHVLANELR---GRGITVNAVAPGPVATELFFNGKSAEQIDQLAGL 206

Query: 193 KLLGLLQSPEKGINSVLDAALAPPE 217
             L  L +PE+   +V  A LA P+
Sbjct: 207 APLERLGTPEEIAAAV--AFLAGPD 229

Length = 245

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 37.4 bits (87), Expect = 0.004
 Identities = 31/135 (22%), Positives = 52/135 (38%), Gaps = 24/135 (17%)

Query: 49  LINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH 106
           L+NNAGIL   T    T E + +++  N  G F  T+ ++P +K +   S I+N++S   
Sbjct: 83  LVNNAGILTGGTVETTTLEEWRRLLDINLTGVFLGTRAVIPPMKEAGGGS-IINMSSI-- 139

Query: 107 RNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA 166
                     E + G         P    Y  SK  +   +              + V +
Sbjct: 140 ----------EGLVGD--------PALAAYNASKGAVRGLTKSAALECATQGYG-IRVNS 180

Query: 167 ADPGVVKTNIMREVP 181
             PG + T +  E+ 
Sbjct: 181 VHPGYIYTPMTDELL 195

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 37.5 bits (87), Expect = 0.004
 Identities = 44/206 (21%), Positives = 79/206 (38%), Gaps = 31/206 (15%)

Query: 15  AFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLT--PEGYDQMMS 72
            +Q DLS+ + +L    S+   +     H  + + INNAG+      L+   EG+ +M  
Sbjct: 60  PYQCDLSNEEQIL----SMFSAI--RTQHQGVDVCINNAGLARPEPLLSGKTEGWKEMFD 113

Query: 73  TNYIGAFFLTKLLLPLLKNSPVP-SRIVNVTSFT-HRNVFNAQVNNETITGKFFLRSKCY 130
            N +     T+     +K   V    I+N+ S + HR    +  +       F+      
Sbjct: 114 VNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVPPVSVFH-------FY------ 160

Query: 131 PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFT 190
             A  +  + L   +   EL      +   H+   +  PG+V+T    ++       A  
Sbjct: 161 -AATKHAVTALTEGL-RQELR-----EAKTHIRATSISPGLVETEFAFKLHDNDPEKAAA 213

Query: 191 VLKLLGLLQSPEKGINSVLDAALAPP 216
             + +  L+ PE   N+VL     PP
Sbjct: 214 TYESIPCLK-PEDVANAVLYVLSTPP 238

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	266
KOG1208	314	consensus Dehydrogenases with different specificit	100.0
PRK05854	313	short chain dehydrogenase; Provisional	99.97
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.97
PRK06197	306	short chain dehydrogenase; Provisional	99.97
PLN00015	308	protochlorophyllide reductase	99.97
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.97
PRK08303	305	short chain dehydrogenase; Provisional	99.97
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.96
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
PRK06196	315	oxidoreductase; Provisional	99.96
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.96
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.95
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.95
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.95
PRK08339	263	short chain dehydrogenase; Provisional	99.95
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.95
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.95
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.95
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.95
PRK07063	260	short chain dehydrogenase; Provisional	99.95
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.95
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.95
PRK08589	272	short chain dehydrogenase; Validated	99.95
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.95
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.95
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.94
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.94
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.94
PRK05867	253	short chain dehydrogenase; Provisional	99.94
PRK06114	254	short chain dehydrogenase; Provisional	99.94
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.94
PRK07062	265	short chain dehydrogenase; Provisional	99.94
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.94
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.94
PRK07478	254	short chain dehydrogenase; Provisional	99.94
PRK06398	258	aldose dehydrogenase; Validated	99.94
PRK12747	252	short chain dehydrogenase; Provisional	99.94
PRK07791	286	short chain dehydrogenase; Provisional	99.94
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.94
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.93
PRK07831	262	short chain dehydrogenase; Provisional	99.93
PRK06128	300	oxidoreductase; Provisional	99.93
PRK07985	294	oxidoreductase; Provisional	99.93
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.93
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.93
PRK08265	261	short chain dehydrogenase; Provisional	99.93
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.93
PRK12743	256	oxidoreductase; Provisional	99.93
PRK09242	257	tropinone reductase; Provisional	99.93
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.93
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.93
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.93
PRK06841	255	short chain dehydrogenase; Provisional	99.93
PRK06172	253	short chain dehydrogenase; Provisional	99.93
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.93
PRK08643	256	acetoin reductase; Validated	99.92
KOG0725	270	consensus Reductases with broad range of substrate	99.92
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.92
PRK06940	275	short chain dehydrogenase; Provisional	99.92
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.92
PRK05599	246	hypothetical protein; Provisional	99.92
PRK06484	520	short chain dehydrogenase; Validated	99.92
PRK07677	252	short chain dehydrogenase; Provisional	99.92
PRK07035	252	short chain dehydrogenase; Provisional	99.92
PRK07856	252	short chain dehydrogenase; Provisional	99.92
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.92
PRK07067	257	sorbitol dehydrogenase; Provisional	99.92
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.92
PRK06125	259	short chain dehydrogenase; Provisional	99.92
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.92
PRK06523	260	short chain dehydrogenase; Provisional	99.92
PRK06483	236	dihydromonapterin reductase; Provisional	99.91
PRK08226	263	short chain dehydrogenase; Provisional	99.91
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.91
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.91
PRK05872	296	short chain dehydrogenase; Provisional	99.91
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.91
PRK06139	330	short chain dehydrogenase; Provisional	99.91
PLN02253	280	xanthoxin dehydrogenase	99.91
PRK06701	290	short chain dehydrogenase; Provisional	99.91
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.91
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.91
PRK12937	245	short chain dehydrogenase; Provisional	99.91
PRK08278	273	short chain dehydrogenase; Provisional	99.91
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.91
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.91
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.91
PRK05876	275	short chain dehydrogenase; Provisional	99.91
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.91
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.91
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.91
PRK05717	255	oxidoreductase; Validated	99.9
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.9
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.9
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.9
PRK08263	275	short chain dehydrogenase; Provisional	99.9
PRK06123	248	short chain dehydrogenase; Provisional	99.9
PRK07774	250	short chain dehydrogenase; Provisional	99.9
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.9
PRK06949	258	short chain dehydrogenase; Provisional	99.9
PRK12939	250	short chain dehydrogenase; Provisional	99.9
PRK07069	251	short chain dehydrogenase; Validated	99.9
PRK06182	273	short chain dehydrogenase; Validated	99.9
PRK09134	258	short chain dehydrogenase; Provisional	99.9
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.9
PRK12744	257	short chain dehydrogenase; Provisional	99.9
PRK05650	270	short chain dehydrogenase; Provisional	99.9
PRK06484	520	short chain dehydrogenase; Validated	99.9
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.89
PRK05855	582	short chain dehydrogenase; Validated	99.89
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.89
PRK09186	256	flagellin modification protein A; Provisional	99.89
PRK08628	258	short chain dehydrogenase; Provisional	99.89
PRK07109	334	short chain dehydrogenase; Provisional	99.89
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.89
PRK07814	263	short chain dehydrogenase; Provisional	99.89
PLN02780	320	ketoreductase/ oxidoreductase	99.89
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.89
PRK07832	272	short chain dehydrogenase; Provisional	99.89
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.89
PRK05993	277	short chain dehydrogenase; Provisional	99.89
PRK06138	252	short chain dehydrogenase; Provisional	99.89
PRK07825	273	short chain dehydrogenase; Provisional	99.89
PRK05875	276	short chain dehydrogenase; Provisional	99.88
PRK08862	227	short chain dehydrogenase; Provisional	99.88
PRK12742	237	oxidoreductase; Provisional	99.88
PRK07576	264	short chain dehydrogenase; Provisional	99.88
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
PRK06924	251	short chain dehydrogenase; Provisional	99.88
PRK07890	258	short chain dehydrogenase; Provisional	99.88
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.88
PRK06179	270	short chain dehydrogenase; Provisional	99.88
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.88
PRK05884	223	short chain dehydrogenase; Provisional	99.88
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.88
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
PRK06057	255	short chain dehydrogenase; Provisional	99.88
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.88
PRK08267	260	short chain dehydrogenase; Provisional	99.88
PRK06198	260	short chain dehydrogenase; Provisional	99.88
PRK06180	277	short chain dehydrogenase; Provisional	99.88
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
PRK06500	249	short chain dehydrogenase; Provisional	99.88
PRK07577	234	short chain dehydrogenase; Provisional	99.88
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.87
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.87
PRK12827	249	short chain dehydrogenase; Provisional	99.87
PRK07024	257	short chain dehydrogenase; Provisional	99.87
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.87
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.87
PRK10538	248	malonic semialdehyde reductase; Provisional	99.87
PRK09135	249	pteridine reductase; Provisional	99.87
PRK06914	280	short chain dehydrogenase; Provisional	99.87
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.87
PRK07904	253	short chain dehydrogenase; Provisional	99.87
PRK05693	274	short chain dehydrogenase; Provisional	99.87
PRK07023	243	short chain dehydrogenase; Provisional	99.87
PRK06482	276	short chain dehydrogenase; Provisional	99.86
PRK05866	293	short chain dehydrogenase; Provisional	99.86
PRK08251	248	short chain dehydrogenase; Provisional	99.86
PRK07454	241	short chain dehydrogenase; Provisional	99.86
PRK12746	254	short chain dehydrogenase; Provisional	99.86
PRK07775	274	short chain dehydrogenase; Provisional	99.86
PRK07074	257	short chain dehydrogenase; Provisional	99.86
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.86
PRK07041	230	short chain dehydrogenase; Provisional	99.86
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.86
PRK07578	199	short chain dehydrogenase; Provisional	99.86
PRK08703	239	short chain dehydrogenase; Provisional	99.86
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.85
PRK08177	225	short chain dehydrogenase; Provisional	99.85
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.85
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.85
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.85
PRK07060	245	short chain dehydrogenase; Provisional	99.84
PRK07806	248	short chain dehydrogenase; Provisional	99.84
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.84
PRK12829	264	short chain dehydrogenase; Provisional	99.84
PRK08324	681	short chain dehydrogenase; Validated	99.84
PRK09072	263	short chain dehydrogenase; Provisional	99.84
PRK06194	287	hypothetical protein; Provisional	99.84
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.84
PRK07102	243	short chain dehydrogenase; Provisional	99.83
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.83
PRK06181	263	short chain dehydrogenase; Provisional	99.83
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.83
COG1028	251	FabG Dehydrogenases with different specificities (	99.83
PRK06101	240	short chain dehydrogenase; Provisional	99.82
PRK07201	657	short chain dehydrogenase; Provisional	99.81
PRK12828	239	short chain dehydrogenase; Provisional	99.8
PRK07326	237	short chain dehydrogenase; Provisional	99.8
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.77
PRK06953	222	short chain dehydrogenase; Provisional	99.77
PRK08017	256	oxidoreductase; Provisional	99.77
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.77
PRK08264	238	short chain dehydrogenase; Validated	99.76
PRK09291	257	short chain dehydrogenase; Provisional	99.76
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.75
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.75
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.74
PRK12367	245	short chain dehydrogenase; Provisional	99.71
PRK08219	227	short chain dehydrogenase; Provisional	99.69
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.58
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.56
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.49
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.44
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.42
PLN03209	576	translocon at the inner envelope of chloroplast su	99.3
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.29
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.29
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.29
PLN02653	340	GDP-mannose 4,6-dehydratase	99.27
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.22
PLN02583	297	cinnamoyl-CoA reductase	99.21
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.2
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.18
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.13
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.12
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.11
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.1
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.06
PLN02650	351	dihydroflavonol-4-reductase	99.06
PLN02214	342	cinnamoyl-CoA reductase	99.01
PLN02240	352	UDP-glucose 4-epimerase	98.99
PLN00198	338	anthocyanidin reductase; Provisional	98.98
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	98.98
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	98.98
PLN02896	353	cinnamyl-alcohol dehydrogenase	98.96
PRK10675	338	UDP-galactose-4-epimerase; Provisional	98.94
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	98.93
PLN02572	442	UDP-sulfoquinovose synthase	98.88
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	98.86
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	98.86
TIGR01746	367	Thioester-redct thioester reductase domain. It has	98.8
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	98.8
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	98.78
PLN02427	386	UDP-apiose/xylose synthase	98.77
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	98.77
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	98.76
PLN02260	668	probable rhamnose biosynthetic enzyme	98.72
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	98.72
PLN02686	367	cinnamoyl-CoA reductase	98.69
PRK06720	169	hypothetical protein; Provisional	98.66
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	98.58
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	98.56
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	98.56
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	98.53
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	98.51
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	98.47
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	98.47
PLN02695	370	GDP-D-mannose-3',5'-epimerase	98.46
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	98.42
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	98.4
PLN02996	491	fatty acyl-CoA reductase	98.4
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	98.38
PRK07201	657	short chain dehydrogenase; Provisional	98.37
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	98.33
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	98.33
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	98.32
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	98.29
PLN02206	442	UDP-glucuronate decarboxylase	98.23
COG3320	382	Putative dehydrogenase domain of multifunctional n	98.19
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	98.06
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	97.93
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	97.92
PLN02166	436	dTDP-glucose 4,6-dehydratase	97.91
CHL00194	317	ycf39 Ycf39; Provisional	97.82
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	97.79
PLN02778	298	3,5-epimerase/4-reductase	97.79
PRK05865	854	hypothetical protein; Provisional	97.73
PLN02260	668	probable rhamnose biosynthetic enzyme	97.71
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	97.69
PLN02503	605	fatty acyl-CoA reductase 2	97.49
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	97.37
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.08
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	97.06
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	97.04
PLN00016	378	RNA-binding protein; Provisional	96.67
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	95.39
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	95.0
COG4982	866	3-oxoacyl-[acyl-carrier protein]	94.92
PRK12320	699	hypothetical protein; Provisional	94.78
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	94.57
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	93.34
KOG2774	366	consensus NAD dependent epimerase [General functio	92.98
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	92.08
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	91.27
PRK08309	177	short chain dehydrogenase; Provisional	88.19
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	87.33
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	85.65
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	82.15
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	81.46

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=5.6e-33  Score=233.75  Aligned_cols=234  Identities=36%  Similarity=0.570  Sum_probs=188.4

Q ss_pred             hhhcccCCCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHH
Q 024553            2 ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL   81 (266)
Q Consensus         2 ~~i~~~~~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l   81 (266)
                      ++|....+..+++++.||+++.++|+++++++++      ..+++|++|||||++.+....+.|++|.+|++|++|+|++
T Consensus        77 ~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~------~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flL  150 (314)
T KOG1208|consen   77 EQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKK------KEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLL  150 (314)
T ss_pred             HHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHh------cCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHH
Confidence            4566666778999999999999999999999998      7799999999999998777889999999999999999999


Q ss_pred             HHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCC
Q 024553           82 TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRH  161 (266)
Q Consensus        82 ~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~  161 (266)
                      ++.++|.|+.+. ++|||++||..+    ....+.+++.+.   ..+.+....+|+.||.++..+++.|++++.   . |
T Consensus       151 t~lLlp~lk~s~-~~RIV~vsS~~~----~~~~~~~~l~~~---~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~---~-~  218 (314)
T KOG1208|consen  151 TELLLPLLKRSA-PSRIVNVSSILG----GGKIDLKDLSGE---KAKLYSSDAAYALSKLANVLLANELAKRLK---K-G  218 (314)
T ss_pred             HHHHHHHHhhCC-CCCEEEEcCccc----cCccchhhccch---hccCccchhHHHHhHHHHHHHHHHHHHHhh---c-C
Confidence            999999999987 599999999887    222334444331   122266667899999999999999999995   4 9


Q ss_pred             eEEEEecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC--CCcccceeecCCCccccCCccccC
Q 024553          162 VSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP--PETSGVYFFGGKGRTVNSSALSFN  239 (266)
Q Consensus       162 i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~--~~~~G~~~~~~~g~~~~~~~~~~~  239 (266)
                      |+++.+|||.|+|+...+.....+.+......+  .+.+|+++|+..+++++.|  +..+|.|+..|  ........+.+
T Consensus       219 V~~~~~hPG~v~t~~l~r~~~~~~~l~~~l~~~--~~ks~~~ga~t~~~~a~~p~~~~~sg~y~~d~--~~~~~~~~a~d  294 (314)
T KOG1208|consen  219 VTTYSVHPGVVKTTGLSRVNLLLRLLAKKLSWP--LTKSPEQGAATTCYAALSPELEGVSGKYFEDC--AIAEPSEEALD  294 (314)
T ss_pred             ceEEEECCCcccccceecchHHHHHHHHHHHHH--hccCHHHHhhheehhccCccccCccccccccc--cccccccccCC
Confidence            999999999999994444333333333322222  2369999999999999999  46789998743  33444677899


Q ss_pred             HHHHHHHHHHHHHHhhhc
Q 024553          240 SKLAGELWTTSCNLFINS  257 (266)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~  257 (266)
                      ++.++++|+.+++++...
T Consensus       295 ~~~~~~lw~~s~~l~~~~  312 (314)
T KOG1208|consen  295 EELAEKLWKFSEELIDEQ  312 (314)
T ss_pred             HHHHHHHHHHHHHHhhhc
Confidence            999999999999988754

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.8e-29  Score=215.58  Aligned_cols=237  Identities=30%  Similarity=0.408  Sum_probs=176.9

Q ss_pred             hhcccCCCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCC-CCcCCCcccchhhhhhhhhHHHH
Q 024553            3 DITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT-SSRLTPEGYDQMMSTNYIGAFFL   81 (266)
Q Consensus         3 ~i~~~~~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~-~~~~~~~~~~~~~~~n~~~~~~l   81 (266)
                      +|.+..++.++.++.||+++.++++++++++.+      ..+++|+||||||+..+ ..+.+.++++.+|++|++|++++
T Consensus        57 ~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~------~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l  130 (313)
T PRK05854         57 AIRTAVPDAKLSLRALDLSSLASVAALGEQLRA------EGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFAL  130 (313)
T ss_pred             HHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH------hCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHH
Confidence            454555566799999999999999999999988      67899999999998753 34578899999999999999999


Q ss_pred             HHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCC
Q 024553           82 TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRH  161 (266)
Q Consensus        82 ~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~  161 (266)
                      ++.++|.|++.  .++||++||..+...   .++++++..     ...+++...|+.||+++.++++.|++++.. ...+
T Consensus       131 ~~~llp~l~~~--~~riv~vsS~~~~~~---~~~~~~~~~-----~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~-~~~g  199 (313)
T PRK05854        131 TAHLLPLLRAG--RARVTSQSSIAARRG---AINWDDLNW-----ERSYAGMRAYSQSKIAVGLFALELDRRSRA-AGWG  199 (313)
T ss_pred             HHHHHHHHHhC--CCCeEEEechhhcCC---CcCcccccc-----cccCcchhhhHHHHHHHHHHHHHHHHHhhc-CCCC
Confidence            99999999764  579999999876432   222332222     345667789999999999999999987531 1468


Q ss_pred             eEEEEecCCcccCCccCcchhH----HHHHHH--HHHHHhh-cCCCHHHHHHHHHHHhcCCCCcccceeecCC-----Cc
Q 024553          162 VSVIAADPGVVKTNIMREVPSF----LSLMAF--TVLKLLG-LLQSPEKGINSVLDAALAPPETSGVYFFGGK-----GR  229 (266)
Q Consensus       162 i~v~~v~PG~v~T~~~~~~~~~----~~~~~~--~~~~~~~-~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~-----g~  229 (266)
                      |+||+++||+|+|++....+..    ..+...  ....... .+.+++++|...+++...++..+|.||..++     |.
T Consensus       200 I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~~l~~a~~~~~~~g~~~~~~~~~~~~~~  279 (313)
T PRK05854        200 ITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLSARGFLVGTVESAILPALYAATSPDAEGGAFYGPRGPGELGGG  279 (313)
T ss_pred             eEEEEEecceeccCccccccccccchhHHHHHHHHHHhhcccccCCHHHHHHHhhheeeCCCCCCCcEECCCcccccCCC
Confidence            9999999999999987542210    001100  1111111 2469999999999888877767799997542     11


Q ss_pred             --cccCCccccCHHHHHHHHHHHHHHhhh
Q 024553          230 --TVNSSALSFNSKLAGELWTTSCNLFIN  256 (266)
Q Consensus       230 --~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (266)
                        ...+.....+++.+++||+.|+++++.
T Consensus       280 ~~~~~~~~~~~d~~~~~~lw~~s~~~~~~  308 (313)
T PRK05854        280 PVEQALYPPLRRNAEAARLWEVSEQLTGV  308 (313)
T ss_pred             cccCCCCcccCCHHHHHHHHHHHHHHHCC
Confidence              122334467999999999999999873

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.97  E-value=3.9e-30  Score=203.74  Aligned_cols=189  Identities=23%  Similarity=0.287  Sum_probs=159.0

Q ss_pred             ChhhcccCCCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhH
Q 024553            1 MADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGA   78 (266)
Q Consensus         1 ~~~i~~~~~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~   78 (266)
                      |++|..+.+.+.+.++..|++|.+++.++++.+.+      +++++|+||||||.+  .+..+.+.++|+.++++|+.|.
T Consensus        43 L~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~------~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~  116 (246)
T COG4221          43 LEALADEIGAGAALALALDVTDRAAVEAAIEALPE------EFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGL  116 (246)
T ss_pred             HHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHH------hhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHH
Confidence            35666676556899999999999999999999998      779999999999988  4667889999999999999999


Q ss_pred             HHHHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCC
Q 024553           79 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDK  158 (266)
Q Consensus        79 ~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~  158 (266)
                      ++.+++++|.|.+++ .|.||++||++|                    ..+|++...|+++|+++..|+..|..++.   
T Consensus       117 l~~~~avLP~m~~r~-~G~IiN~~SiAG--------------------~~~y~~~~vY~ATK~aV~~fs~~LR~e~~---  172 (246)
T COG4221         117 LNGTRAVLPGMVERK-SGHIINLGSIAG--------------------RYPYPGGAVYGATKAAVRAFSLGLRQELA---  172 (246)
T ss_pred             HHHHHHhhhHHHhcC-CceEEEeccccc--------------------cccCCCCccchhhHHHHHHHHHHHHHHhc---
Confidence            999999999999988 889999999998                    56899999999999999999999999998   


Q ss_pred             CCCeEEEEecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcc
Q 024553          159 SRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETS  219 (266)
Q Consensus       159 ~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~  219 (266)
                      .++|||..|.||.|.|...............-....-..+.+|+++|+.+.|++-.|++.+
T Consensus       173 g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~~~~~l~p~dIA~~V~~~~~~P~~vn  233 (246)
T COG4221         173 GTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYKGGTALTPEDIAEAVLFAATQPQHVN  233 (246)
T ss_pred             CCCeeEEEecCceecceecccccCCchhhhHHHHhccCCCCCHHHHHHHHHHHHhCCCccc
Confidence            8999999999999988776665433211111111112235699999999999888887654

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.97  E-value=9.6e-29  Score=210.57  Aligned_cols=234  Identities=37%  Similarity=0.481  Sum_probs=176.8

Q ss_pred             hcccCCCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHH
Q 024553            4 ITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTK   83 (266)
Q Consensus         4 i~~~~~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~   83 (266)
                      +.+..++.++.++.+|+++.++++++++++.+      .++++|+||||||+..+....+.++++.++++|+.|++.+++
T Consensus        60 l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~------~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  133 (306)
T PRK06197         60 ITAATPGADVTLQELDLTSLASVRAAADALRA------AYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTG  133 (306)
T ss_pred             HHHhCCCCceEEEECCCCCHHHHHHHHHHHHh------hCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHH
Confidence            33334456789999999999999999999988      678999999999987655567889999999999999999999


Q ss_pred             hhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeE
Q 024553           84 LLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVS  163 (266)
Q Consensus        84 ~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~  163 (266)
                      .+++.|++.+ .++||++||..+.....  ...++..     ...++++...|+.||++++.+++.+++++.   ..+++
T Consensus       134 ~ll~~l~~~~-~~~iV~vSS~~~~~~~~--~~~~~~~-----~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~---~~~i~  202 (306)
T PRK06197        134 LLLDRLLPVP-GSRVVTVSSGGHRIRAA--IHFDDLQ-----WERRYNRVAAYGQSKLANLLFTYELQRRLA---AAGAT  202 (306)
T ss_pred             HHHHHHhhCC-CCEEEEECCHHHhccCC--CCccccC-----cccCCCcHHHHHHHHHHHHHHHHHHHHHhh---cCCCC
Confidence            9999998876 68999999987543111  1111111     123456678899999999999999999996   56655


Q ss_pred             EE--EecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCc-------cccCC
Q 024553          164 VI--AADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGR-------TVNSS  234 (266)
Q Consensus       164 v~--~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~-------~~~~~  234 (266)
                      ++  +++||+|+|++.++.+........ ...++ ...+|++.+..++++...++..+|.||..+++.       ....+
T Consensus       203 v~~v~~~PG~v~T~~~~~~~~~~~~~~~-~~~~~-~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  280 (306)
T PRK06197        203 TIAVAAHPGVSNTELARNLPRALRPVAT-VLAPL-LAQSPEMGALPTLRAATDPAVRGGQYYGPDGFGEQRGYPKVVASS  280 (306)
T ss_pred             eEEEEeCCCcccCcccccCcHHHHHHHH-HHHhh-hcCCHHHHHHHHHHHhcCCCcCCCeEEccCcccccCCCCccCCCc
Confidence            54  558999999998876543322111 11121 235899999999988777766789998754332       12344


Q ss_pred             ccccCHHHHHHHHHHHHHHhhh
Q 024553          235 ALSFNSKLAGELWTTSCNLFIN  256 (266)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~  256 (266)
                      ...++++.+++||+.|+++++-
T Consensus       281 ~~~~~~~~~~~lw~~~~~~~~~  302 (306)
T PRK06197        281 AQSHDEDLQRRLWAVSEELTGV  302 (306)
T ss_pred             cccCCHHHHHHHHHHHHHHHCC
Confidence            5678999999999999999974

>PLN00015 protochlorophyllide reductase

Probab=99.97  E-value=6.5e-29  Score=211.73  Aligned_cols=238  Identities=23%  Similarity=0.340  Sum_probs=174.8

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC---CCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      +.++.++.+|+++.++++++++++.+      .++++|+||||||+..   +..+.+.++|+++|++|+.|++++++.++
T Consensus        46 ~~~~~~~~~Dl~d~~~v~~~~~~~~~------~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l  119 (308)
T PLN00015         46 KDSYTVMHLDLASLDSVRQFVDNFRR------SGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLL  119 (308)
T ss_pred             CCeEEEEEecCCCHHHHHHHHHHHHh------cCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            34688999999999999999999987      6689999999999863   34567889999999999999999999999


Q ss_pred             HHHhcCCC-CCeEEEEcCCcccccc-----cccCCccccc----------cCcccCCCCCChhhcchHhHHHHHHHHHHH
Q 024553           87 PLLKNSPV-PSRIVNVTSFTHRNVF-----NAQVNNETIT----------GKFFLRSKCYPCARIYEYSKLCLLIFSYEL  150 (266)
Q Consensus        87 ~~l~~~~~-~~~iv~vsS~~~~~~~-----~~~~~~~~~~----------~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~l  150 (266)
                      |.|++++. .++||++||..+....     +...+..++.          .........+.+..+|+.||+++..+++.+
T Consensus       120 p~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~l  199 (308)
T PLN00015        120 DDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEF  199 (308)
T ss_pred             HHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHH
Confidence            99987531 4799999998764211     0000111110          000011234567789999999999999999


Q ss_pred             HHhhCCCCCCCeEEEEecCCcc-cCCccCcchhHHHHHHH-HHHHHhhcCCCHHHHHHHHHHHhcCCC-CcccceeecCC
Q 024553          151 HRNLGLDKSRHVSVIAADPGVV-KTNIMREVPSFLSLMAF-TVLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGK  227 (266)
Q Consensus       151 a~~~~~~~~~~i~v~~v~PG~v-~T~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~a~~~~~~~~~~~-~~~G~~~~~~~  227 (266)
                      ++++..  ..+|+|++++||+| .|++.+...+....... ....+.+++.+|+++|+.+++++.... ..+|.|+..++
T Consensus       200 a~~~~~--~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~~g  277 (308)
T PLN00015        200 HRRYHE--ETGITFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWNG  277 (308)
T ss_pred             HHhhcc--cCCeEEEEecCCcccCccccccccHHHHHHHHHHHHHHhcccccHHHhhhhhhhhccccccCCCccccccCC
Confidence            999851  36999999999999 78887653322221111 112234456799999999997666433 56899987544


Q ss_pred             C---ccccCCccccCHHHHHHHHHHHHHHhh
Q 024553          228 G---RTVNSSALSFNSKLAGELWTTSCNLFI  255 (266)
Q Consensus       228 g---~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (266)
                      +   ....+...+.|++.+++||+.|+++++
T Consensus       278 ~~~~~~~~~~~~a~d~~~~~~lw~~~~~~~~  308 (308)
T PLN00015        278 GSASFENQLSQEASDAEKAKKVWEISEKLVG  308 (308)
T ss_pred             cccccccCcChhhcCHHHHHHHHHHHHHhcC
Confidence            3   224677778999999999999999864

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.97  E-value=1.9e-30  Score=196.77  Aligned_cols=186  Identities=23%  Similarity=0.279  Sum_probs=156.4

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCC--CCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      +....+.||+++..+++..+++..+      .++.+++||||||+..+  .-.+..++|++.+++|+.|.|+.++.+.+.
T Consensus        62 ~~h~aF~~DVS~a~~v~~~l~e~~k------~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~  135 (256)
T KOG1200|consen   62 GDHSAFSCDVSKAHDVQNTLEEMEK------SLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRA  135 (256)
T ss_pred             CccceeeeccCcHHHHHHHHHHHHH------hcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHH
Confidence            4678999999999999999999988      78999999999999853  457789999999999999999999999998


Q ss_pred             HhcC-CCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           89 LKNS-PVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        89 l~~~-~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      |-.. ..+.+||++||+.+..                    +..+...|+++|.++..|+++.|+|++   .++|+||+|
T Consensus       136 ~~~~~~~~~sIiNvsSIVGki--------------------GN~GQtnYAAsK~GvIgftktaArEla---~knIrvN~V  192 (256)
T KOG1200|consen  136 MVMNQQQGLSIINVSSIVGKI--------------------GNFGQTNYAASKGGVIGFTKTAARELA---RKNIRVNVV  192 (256)
T ss_pred             HHHhcCCCceEEeehhhhccc--------------------ccccchhhhhhcCceeeeeHHHHHHHh---hcCceEeEe
Confidence            5433 2256999999999843                    455677899999999999999999998   899999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCc---ccceeecCCC
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPET---SGVYFFGGKG  228 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~---~G~~~~~~~g  228 (266)
                      .||+|.|||+...++... .......|++++..+||+|..++  |+.++.+   +|..+...+|
T Consensus       193 lPGFI~tpMT~~mp~~v~-~ki~~~iPmgr~G~~EevA~~V~--fLAS~~ssYiTG~t~evtGG  253 (256)
T KOG1200|consen  193 LPGFIATPMTEAMPPKVL-DKILGMIPMGRLGEAEEVANLVL--FLASDASSYITGTTLEVTGG  253 (256)
T ss_pred             ccccccChhhhhcCHHHH-HHHHccCCccccCCHHHHHHHHH--HHhccccccccceeEEEecc
Confidence            999999999999877543 22344567889999999999999  6667644   4766665444

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.8e-30  Score=218.64  Aligned_cols=224  Identities=16%  Similarity=0.170  Sum_probs=175.4

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcC-CCC------CCCCcCCCcccchhhhhhhhhHHHHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNA-GIL------ATSSRLTPEGYDQMMSTNYIGAFFLTK   83 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nA-G~~------~~~~~~~~~~~~~~~~~n~~~~~~l~~   83 (266)
                      .++.++.||++++++++++++++.+      .++++|++|||| |..      .+..+.+.++|++++++|+.+++++++
T Consensus        67 ~~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  140 (305)
T PRK08303         67 GRGIAVQVDHLVPEQVRALVERIDR------EQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSH  140 (305)
T ss_pred             CceEEEEcCCCCHHHHHHHHHHHHH------HcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHH
Confidence            4678999999999999999999998      678999999999 752      344566788899999999999999999


Q ss_pred             hhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeE
Q 024553           84 LLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVS  163 (266)
Q Consensus        84 ~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~  163 (266)
                      .++|+|++++ +|+||++||..+...                 ..+.+....|+++|+++..++++|+.++.   +.+|+
T Consensus       141 ~~lp~m~~~~-~g~IV~isS~~~~~~-----------------~~~~~~~~~Y~asKaal~~lt~~La~el~---~~gIr  199 (305)
T PRK08303        141 FALPLLIRRP-GGLVVEITDGTAEYN-----------------ATHYRLSVFYDLAKTSVNRLAFSLAHELA---PHGAT  199 (305)
T ss_pred             HHHHHhhhCC-CcEEEEECCcccccc-----------------CcCCCCcchhHHHHHHHHHHHHHHHHHhh---hcCcE
Confidence            9999998765 689999999764210                 11233456799999999999999999998   78999


Q ss_pred             EEEecCCcccCCccCcch--hHHHHHHHHHHHH-hhcCCCHHHHHHHHHHHhcCCC--CcccceeecCCCccccCCcccc
Q 024553          164 VIAADPGVVKTNIMREVP--SFLSLMAFTVLKL-LGLLQSPEKGINSVLDAALAPP--ETSGVYFFGGKGRTVNSSALSF  238 (266)
Q Consensus       164 v~~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~-~~~~~~p~~~a~~~~~~~~~~~--~~~G~~~~~~~g~~~~~~~~~~  238 (266)
                      ||+|+||+|+|++.....  ....+.......+ +++..+|+++|..+++++....  ..+|.++.  .+.......+..
T Consensus       200 Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~p~~~~~~~peevA~~v~fL~s~~~~~~itG~~l~--~~~~~~~~~~~~  277 (305)
T PRK08303        200 AVALTPGWLRSEMMLDAFGVTEENWRDALAKEPHFAISETPRYVGRAVAALAADPDVARWNGQSLS--SGQLARVYGFTD  277 (305)
T ss_pred             EEEecCCccccHHHHHhhccCccchhhhhccccccccCCCHHHHHHHHHHHHcCcchhhcCCcEEE--hHHHHHhcCccC
Confidence            999999999999753211  0001111111123 3556789999999996554332  35899987  556667778888


Q ss_pred             CHHHHHHHHHHHHHHhhhccccccc
Q 024553          239 NSKLAGELWTTSCNLFINSQLACRD  263 (266)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~  263 (266)
                      .++.+++||+++++.-....|++.+
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~  302 (305)
T PRK08303        278 LDGSRPDAWRYLVEVQDAGKPADVT  302 (305)
T ss_pred             CCCCCCcchhhhhhccccCCCCCcc
Confidence            8999999999999999999988765

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.96  E-value=1.4e-27  Score=203.87  Aligned_cols=238  Identities=25%  Similarity=0.362  Sum_probs=173.9

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCC---CCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT---SSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      +.++.++.||+++.++++++++++.+      .++++|++|||||+..+   ....+.++|+.++++|+.|++.+++.++
T Consensus        52 ~~~~~~~~~Dl~~~~~v~~~~~~~~~------~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l  125 (314)
T TIGR01289        52 KDSYTIMHLDLGSLDSVRQFVQQFRE------SGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLL  125 (314)
T ss_pred             CCeEEEEEcCCCCHHHHHHHHHHHHH------hCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHH
Confidence            45688999999999999999999987      56889999999998643   2356788999999999999999999999


Q ss_pred             HHHhcCC-CCCeEEEEcCCccccccc-----ccCCcccccc--------CcccCCCCCChhhcchHhHHHHHHHHHHHHH
Q 024553           87 PLLKNSP-VPSRIVNVTSFTHRNVFN-----AQVNNETITG--------KFFLRSKCYPCARIYEYSKLCLLIFSYELHR  152 (266)
Q Consensus        87 ~~l~~~~-~~~~iv~vsS~~~~~~~~-----~~~~~~~~~~--------~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~  152 (266)
                      |+|++.+ ..++||++||..+.....     ...+..++..        ....+..++.+..+|+.||+++..+++.+++
T Consensus       126 ~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~  205 (314)
T TIGR01289       126 DDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHR  205 (314)
T ss_pred             HHHHhCCCCCCeEEEEecCccccccCCCcCCCcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHH
Confidence            9998753 147999999988743210     0111111110        0011124456778899999999999999999


Q ss_pred             hhCCCCCCCeEEEEecCCcc-cCCccCcchhHHHHHHHHH-HHHhhcCCCHHHHHHHHHHHhcCCC-CcccceeecCCCc
Q 024553          153 NLGLDKSRHVSVIAADPGVV-KTNIMREVPSFLSLMAFTV-LKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGR  229 (266)
Q Consensus       153 ~~~~~~~~~i~v~~v~PG~v-~T~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~a~~~~~~~~~~~-~~~G~~~~~~~g~  229 (266)
                      ++..  ..+|+|++|+||+| +|++.+............. ......+.+|++.|+.+++++..+. ..+|.||..++..
T Consensus       206 ~~~~--~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~~  283 (314)
T TIGR01289       206 RFHD--ETGITFASLYPGCIADTGLFREHVPLFRTLFPPFQKYITKGYVSEEEAGERLAQVVSDPKLKKSGVYWSWGNRQ  283 (314)
T ss_pred             Hhcc--CCCeEEEEecCCcccCCcccccccHHHHHHHHHHHHHHhccccchhhhhhhhHHhhcCcccCCCceeeecCCcc
Confidence            9841  46899999999999 6998765332222111111 1112235699999999998777654 4578888743321


Q ss_pred             c---ccCCccccCHHHHHHHHHHHHHHhh
Q 024553          230 T---VNSSALSFNSKLAGELWTTSCNLFI  255 (266)
Q Consensus       230 ~---~~~~~~~~~~~~~~~~~~~~~~~~~  255 (266)
                      .   ..+...+.+++.+++||+.|+++++
T Consensus       284 ~~~~~~~~~~~~~~~~~~~lw~~~~~~~~  312 (314)
T TIGR01289       284 ESFVNQLSEEVSDDSKASKMWDLSEKLVG  312 (314)
T ss_pred             cccccCCChhhcCHHHHHHHHHHHHHHhc
Confidence            1   3567778999999999999999875

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=1.2e-28  Score=206.65  Aligned_cols=186  Identities=18%  Similarity=0.229  Sum_probs=149.5

Q ss_pred             EEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC------CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           14 EAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        14 ~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      .+++||+++.++++++++++.+      .++++|+||||||+..      +..+.+.++|+++|++|+.+++++++.++|
T Consensus        58 ~~~~~Dv~d~~~v~~~~~~i~~------~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p  131 (274)
T PRK08415         58 YVYELDVSKPEHFKSLAESLKK------DLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLP  131 (274)
T ss_pred             eEEEecCCCHHHHHHHHHHHHH------HcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHH
Confidence            6789999999999999999988      6789999999999852      345778899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++   +|+||++||.++.                    .+.+....|+++|+++..|+++++.++.   +++|+||+|
T Consensus       132 ~m~~---~g~Iv~isS~~~~--------------------~~~~~~~~Y~asKaal~~l~~~la~el~---~~gIrVn~v  185 (274)
T PRK08415        132 LLND---GASVLTLSYLGGV--------------------KYVPHYNVMGVAKAALESSVRYLAVDLG---KKGIRVNAI  185 (274)
T ss_pred             Hhcc---CCcEEEEecCCCc--------------------cCCCcchhhhhHHHHHHHHHHHHHHHhh---hcCeEEEEE
Confidence            9975   4799999998762                    3455667899999999999999999997   889999999


Q ss_pred             cCCcccCCccCcchhHHHHHHH-HHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCccc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAF-TVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  231 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~  231 (266)
                      +||+|+|++............+ ....|++++.+|+|+|+.+++++.. +...+|..+..++|...
T Consensus       186 ~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~pedva~~v~fL~s~~~~~itG~~i~vdGG~~~  251 (274)
T PRK08415        186 SAGPIKTLAASGIGDFRMILKWNEINAPLKKNVSIEEVGNSGMYLLSDLSSGVTGEIHYVDAGYNI  251 (274)
T ss_pred             ecCccccHHHhccchhhHHhhhhhhhCchhccCCHHHHHHHHHHHhhhhhhcccccEEEEcCcccc
Confidence            9999999875433221111111 1223567788999999999955432 23568988887777543

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=2.2e-28  Score=202.77  Aligned_cols=187  Identities=18%  Similarity=0.170  Sum_probs=150.9

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC------CCCcCCCcccchhhhhhhhhHHHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKL   84 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~------~~~~~~~~~~~~~~~~n~~~~~~l~~~   84 (266)
                      ..+.+++||+++.++++++++++.+      .++++|+||||||+..      +..+.+.++|+.++++|+.+++.+++.
T Consensus        55 ~~~~~~~~Dl~~~~~v~~~~~~~~~------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~  128 (252)
T PRK06079         55 EEDLLVECDVASDESIERAFATIKE------RVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKY  128 (252)
T ss_pred             CceeEEeCCCCCHHHHHHHHHHHHH------HhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHH
Confidence            3678999999999999999999988      6689999999999863      445678899999999999999999999


Q ss_pred             hHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEE
Q 024553           85 LLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSV  164 (266)
Q Consensus        85 ~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v  164 (266)
                      ++|+|++   .|+||+++|.++                    ..+.+....|+++|+++..|+++++.++.   +++|+|
T Consensus       129 ~~~~~~~---~g~Iv~iss~~~--------------------~~~~~~~~~Y~asKaal~~l~~~la~el~---~~gI~v  182 (252)
T PRK06079        129 ARPLLNP---GASIVTLTYFGS--------------------ERAIPNYNVMGIAKAALESSVRYLARDLG---KKGIRV  182 (252)
T ss_pred             HHHhccc---CceEEEEeccCc--------------------cccCCcchhhHHHHHHHHHHHHHHHHHhh---hcCcEE
Confidence            9999964   579999999876                    23556678899999999999999999997   789999


Q ss_pred             EEecCCcccCCccCcchhH-HHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCc
Q 024553          165 IAADPGVVKTNIMREVPSF-LSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  229 (266)
Q Consensus       165 ~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~  229 (266)
                      |+|+||+|+|++....... ..........+++++.+|+|+|+.+++++.. +...+|..+..++|.
T Consensus       183 n~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg~  249 (252)
T PRK06079        183 NAISAGAVKTLAVTGIKGHKDLLKESDSRTVDGVGVTIEEVGNTAAFLLSDLSTGVTGDIIYVDKGV  249 (252)
T ss_pred             EEEecCcccccccccCCChHHHHHHHHhcCcccCCCCHHHHHHHHHHHhCcccccccccEEEeCCce
Confidence            9999999999986543211 1111122233567888999999999965432 235578887766663

>PRK06196 oxidoreductase; Provisional

Probab=99.96  E-value=2.3e-27  Score=202.88  Aligned_cols=224  Identities=24%  Similarity=0.341  Sum_probs=169.5

Q ss_pred             EEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcC
Q 024553           13 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS   92 (266)
Q Consensus        13 ~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~   92 (266)
                      +.++.+|+++.++++++++++.+      .++++|+||||||+..+....+.++|+.++++|+.|++.+++.++|.|+++
T Consensus        73 v~~~~~Dl~d~~~v~~~~~~~~~------~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~  146 (315)
T PRK06196         73 VEVVMLDLADLESVRAFAERFLD------SGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAG  146 (315)
T ss_pred             CeEEEccCCCHHHHHHHHHHHHh------cCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence            78899999999999999999988      678999999999987555566788999999999999999999999999887


Q ss_pred             CCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcc
Q 024553           93 PVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVV  172 (266)
Q Consensus        93 ~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v  172 (266)
                      + .++||++||..+...   ...+++..     ...++++...|+.||+++..+++.+++++.   ..+|++++|+||++
T Consensus       147 ~-~~~iV~vSS~~~~~~---~~~~~~~~-----~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~---~~gi~v~~v~PG~v  214 (315)
T PRK06196        147 A-GARVVALSSAGHRRS---PIRWDDPH-----FTRGYDKWLAYGQSKTANALFAVHLDKLGK---DQGVRAFSVHPGGI  214 (315)
T ss_pred             C-CCeEEEECCHHhccC---CCCccccC-----ccCCCChHHHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEeeCCcc
Confidence            6 689999999765321   11111110     023556678899999999999999999997   78999999999999


Q ss_pred             cCCccCcchhHHHHH---HHHHHHHhh-cCCCHHHHHHHHHHHhcCCCC--cccceeecCCCccc---------cCCccc
Q 024553          173 KTNIMREVPSFLSLM---AFTVLKLLG-LLQSPEKGINSVLDAALAPPE--TSGVYFFGGKGRTV---------NSSALS  237 (266)
Q Consensus       173 ~T~~~~~~~~~~~~~---~~~~~~~~~-~~~~p~~~a~~~~~~~~~~~~--~~G~~~~~~~g~~~---------~~~~~~  237 (266)
                      .|++.+.........   ......++. ++.+|+++|..+++++..++.  .+|.|+.. .....         ......
T Consensus       215 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~  293 (315)
T PRK06196        215 LTPLQRHLPREEQVALGWVDEHGNPIDPGFKTPAQGAATQVWAATSPQLAGMGGLYCED-CDIAEPTPKDAPWSGVRPHA  293 (315)
T ss_pred             cCCccccCChhhhhhhhhhhhhhhhhhhhcCCHhHHHHHHHHHhcCCccCCCCCeEeCC-CcccccCCcccccCCCCccc
Confidence            999876653321110   000011222 457999999999988876542  35666642 22111         224457


Q ss_pred             cCHHHHHHHHHHHHHHhh
Q 024553          238 FNSKLAGELWTTSCNLFI  255 (266)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~  255 (266)
                      .+++.+++||+.|+++++
T Consensus       294 ~d~~~~~~lW~~s~~~~~  311 (315)
T PRK06196        294 IDPEAAARLWALSAALTG  311 (315)
T ss_pred             CCHHHHHHHHHHHHHHHC
Confidence            799999999999999986

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=4.2e-28  Score=201.58  Aligned_cols=188  Identities=13%  Similarity=0.076  Sum_probs=149.2

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC------CCCcCCCcccchhhhhhhhhHHHHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTK   83 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~------~~~~~~~~~~~~~~~~n~~~~~~l~~   83 (266)
                      +.++.+++||+++.+++.++++++.+      .++++|++|||||+..      +..+.+.++|+.++++|+.+.+.+++
T Consensus        58 ~~~~~~~~~Dv~d~~~v~~~~~~~~~------~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  131 (257)
T PRK08594         58 GQESLLLPCDVTSDEEITACFETIKE------EVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAR  131 (257)
T ss_pred             CCceEEEecCCCCHHHHHHHHHHHHH------hCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHH
Confidence            45788999999999999999999988      6789999999999753      33567788999999999999999999


Q ss_pred             hhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeE
Q 024553           84 LLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVS  163 (266)
Q Consensus        84 ~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~  163 (266)
                      .++|+|++   +|+||++||..+.                    .+.+....|+++|+++..|+++++.++.   +++|+
T Consensus       132 ~~~~~~~~---~g~Iv~isS~~~~--------------------~~~~~~~~Y~asKaal~~l~~~la~el~---~~gIr  185 (257)
T PRK08594        132 EAKKLMTE---GGSIVTLTYLGGE--------------------RVVQNYNVMGVAKASLEASVKYLANDLG---KDGIR  185 (257)
T ss_pred             HHHHhccc---CceEEEEcccCCc--------------------cCCCCCchhHHHHHHHHHHHHHHHHHhh---hcCCE
Confidence            99999965   5899999998863                    3455667899999999999999999997   78999


Q ss_pred             EEEecCCcccCCccCcchhHHH-HHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCc
Q 024553          164 VIAADPGVVKTNIMREVPSFLS-LMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  229 (266)
Q Consensus       164 v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~  229 (266)
                      ||+|+||+++|++......... ........+++++.+|+++|+.+++++.. +...+|..+..++|.
T Consensus       186 vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~l~s~~~~~~tG~~~~~dgg~  253 (257)
T PRK08594        186 VNAISAGPIRTLSAKGVGGFNSILKEIEERAPLRRTTTQEEVGDTAAFLFSDLSRGVTGENIHVDSGY  253 (257)
T ss_pred             EeeeecCcccCHhHhhhccccHHHHHHhhcCCccccCCHHHHHHHHHHHcCcccccccceEEEECCch
Confidence            9999999999997543211111 11111122456778999999999954432 234578888766664

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.96  E-value=4.6e-28  Score=201.52  Aligned_cols=186  Identities=15%  Similarity=0.134  Sum_probs=149.1

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC------CCCCcCCCcccchhhhhhhhhHHHHHHhh
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL------ATSSRLTPEGYDQMMSTNYIGAFFLTKLL   85 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~   85 (266)
                      .+.+++||+++.++++++++++.+      .++++|+||||||+.      .+..+.+.++|++++++|+.+++.+++.+
T Consensus        60 ~~~~~~~Dl~d~~~v~~~~~~~~~------~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~  133 (258)
T PRK07370         60 PSLFLPCDVQDDAQIEETFETIKQ------KWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAA  133 (258)
T ss_pred             cceEeecCcCCHHHHHHHHHHHHH------HcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHH
Confidence            467899999999999999999988      678999999999975      24557788999999999999999999999


Q ss_pred             HHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEE
Q 024553           86 LPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVI  165 (266)
Q Consensus        86 ~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~  165 (266)
                      +|.|++   .|+||++||..+                    ..+.+....|+++|+++..++++|+.++.   +++|+||
T Consensus       134 ~~~m~~---~g~Iv~isS~~~--------------------~~~~~~~~~Y~asKaal~~l~~~la~el~---~~gI~Vn  187 (258)
T PRK07370        134 KPLMSE---GGSIVTLTYLGG--------------------VRAIPNYNVMGVAKAALEASVRYLAAELG---PKNIRVN  187 (258)
T ss_pred             HHHHhh---CCeEEEEecccc--------------------ccCCcccchhhHHHHHHHHHHHHHHHHhC---cCCeEEE
Confidence            999975   579999999876                    23556778899999999999999999998   8899999


Q ss_pred             EecCCcccCCccCcchh-HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCc
Q 024553          166 AADPGVVKTNIMREVPS-FLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  229 (266)
Q Consensus       166 ~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~  229 (266)
                      +|+||+|+|++...... ...........+++++.+|+|++..+++++.. +...+|..+..++|.
T Consensus       188 ~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~fl~s~~~~~~tG~~i~vdgg~  253 (258)
T PRK07370        188 AISAGPIRTLASSAVGGILDMIHHVEEKAPLRRTVTQTEVGNTAAFLLSDLASGITGQTIYVDAGY  253 (258)
T ss_pred             EEecCcccCchhhccccchhhhhhhhhcCCcCcCCCHHHHHHHHHHHhChhhccccCcEEEECCcc
Confidence            99999999997643211 11111111223566788999999999954432 234578877766654

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=7.1e-28  Score=201.69  Aligned_cols=186  Identities=15%  Similarity=0.115  Sum_probs=148.8

Q ss_pred             EEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC------CCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           13 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        13 ~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      ..+++||+++.++++++++++.+      .++++|+||||||+..      ++.+.+.++|++++++|+.+++.+++.++
T Consensus        59 ~~~~~~Dv~d~~~v~~~~~~~~~------~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~  132 (271)
T PRK06505         59 DFVLPCDVEDIASVDAVFEALEK------KWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAA  132 (271)
T ss_pred             ceEEeCCCCCHHHHHHHHHHHHH------HhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHH
Confidence            35789999999999999999998      6789999999999863      34567889999999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |+|++   +|+||+++|..+.                    .+.+....|+++|+++..|+++|+.++.   +.+|+||+
T Consensus       133 ~~m~~---~G~Iv~isS~~~~--------------------~~~~~~~~Y~asKaAl~~l~r~la~el~---~~gIrVn~  186 (271)
T PRK06505        133 KLMPD---GGSMLTLTYGGST--------------------RVMPNYNVMGVAKAALEASVRYLAADYG---PQGIRVNA  186 (271)
T ss_pred             Hhhcc---CceEEEEcCCCcc--------------------ccCCccchhhhhHHHHHHHHHHHHHHHh---hcCeEEEE
Confidence            99974   5899999998762                    3456677899999999999999999998   88999999


Q ss_pred             ecCCcccCCccCcchhHHHHH-HHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCcc
Q 024553          167 ADPGVVKTNIMREVPSFLSLM-AFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  230 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~  230 (266)
                      |+||+|+|++........... ......+++++.+|+|+|+.+++++.. +...+|..+..++|..
T Consensus       187 v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peeva~~~~fL~s~~~~~itG~~i~vdgG~~  252 (271)
T PRK06505        187 ISAGPVRTLAGAGIGDARAIFSYQQRNSPLRRTVTIDEVGGSALYLLSDLSSGVTGEIHFVDSGYN  252 (271)
T ss_pred             EecCCccccccccCcchHHHHHHHhhcCCccccCCHHHHHHHHHHHhCccccccCceEEeecCCcc
Confidence            999999999865432211111 111123566778999999999954432 2345788888777754

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=7.6e-28  Score=200.42  Aligned_cols=187  Identities=14%  Similarity=0.156  Sum_probs=149.7

Q ss_pred             EEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC------CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           14 EAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        14 ~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      .+++||+++.++++++++++.+      .++++|+||||||+..      +..+.+.++|++++++|+.+++.+++.++|
T Consensus        61 ~~~~~Dv~~~~~v~~~~~~~~~------~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~  134 (260)
T PRK06603         61 FVSELDVTNPKSISNLFDDIKE------KWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEA  134 (260)
T ss_pred             eEEEccCCCHHHHHHHHHHHHH------HcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            4679999999999999999988      6789999999999752      345678889999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++   +|+||+++|..+                    ..+.+....|+++|+++..|+++++.++.   +++|+||+|
T Consensus       135 ~m~~---~G~Iv~isS~~~--------------------~~~~~~~~~Y~asKaal~~l~~~la~el~---~~gIrVn~v  188 (260)
T PRK06603        135 LMHD---GGSIVTLTYYGA--------------------EKVIPNYNVMGVAKAALEASVKYLANDMG---ENNIRVNAI  188 (260)
T ss_pred             hhcc---CceEEEEecCcc--------------------ccCCCcccchhhHHHHHHHHHHHHHHHhh---hcCeEEEEE
Confidence            9964   589999999876                    23556678899999999999999999998   789999999


Q ss_pred             cCCcccCCccCcchh-HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCcccc
Q 024553          168 DPGVVKTNIMREVPS-FLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~~  232 (266)
                      +||+++|++...... ...........+++++.+|+|+|+.+++++.. +...+|..+..++|-.+.
T Consensus       189 ~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~~~~  255 (260)
T PRK06603        189 SAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQEDVGGAAVYLFSELSKGVTGEIHYVDCGYNIM  255 (260)
T ss_pred             ecCcCcchhhhcCCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCcccccCcceEEEeCCccccc
Confidence            999999997543211 11111122223567788999999999965432 235578888877775554

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.95  E-value=9e-28  Score=199.95  Aligned_cols=188  Identities=16%  Similarity=0.120  Sum_probs=148.3

Q ss_pred             EEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCC-------CCcCCCcccchhhhhhhhhHHHHHHhh
Q 024553           13 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT-------SSRLTPEGYDQMMSTNYIGAFFLTKLL   85 (266)
Q Consensus        13 ~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~-------~~~~~~~~~~~~~~~n~~~~~~l~~~~   85 (266)
                      ..++.||+++.++++++++++.+      .++++|++|||||+..+       ..+.+.++|++.|++|+.+++.+++.+
T Consensus        58 ~~~~~~Dv~d~~~v~~~~~~~~~------~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~  131 (260)
T PRK06997         58 DLVFPCDVASDEQIDALFASLGQ------HWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAA  131 (260)
T ss_pred             cceeeccCCCHHHHHHHHHHHHH------HhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHH
Confidence            35789999999999999999988      66899999999998632       134677899999999999999999999


Q ss_pred             HHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEE
Q 024553           86 LPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVI  165 (266)
Q Consensus        86 ~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~  165 (266)
                      +|+|++   .|+||++||..+                    ..+.+....|+++|+++..++++++.++.   +++|+||
T Consensus       132 lp~m~~---~g~Ii~iss~~~--------------------~~~~~~~~~Y~asKaal~~l~~~la~el~---~~gIrVn  185 (260)
T PRK06997        132 LPMLSD---DASLLTLSYLGA--------------------ERVVPNYNTMGLAKASLEASVRYLAVSLG---PKGIRAN  185 (260)
T ss_pred             HHhcCC---CceEEEEecccc--------------------ccCCCCcchHHHHHHHHHHHHHHHHHHhc---ccCeEEE
Confidence            999953   579999999876                    23556677899999999999999999998   7899999


Q ss_pred             EecCCcccCCccCcchhHHHHH-HHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCcccc
Q 024553          166 AADPGVVKTNIMREVPSFLSLM-AFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       166 ~v~PG~v~T~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~~  232 (266)
                      .|+||+|+|++........... ......+++++.+|+|+++.+++++.. +...+|..+..++|...-
T Consensus       186 ~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg~~~~  254 (260)
T PRK06997        186 GISAGPIKTLAASGIKDFGKILDFVESNAPLRRNVTIEEVGNVAAFLLSDLASGVTGEITHVDSGFNAV  254 (260)
T ss_pred             EEeeCccccchhccccchhhHHHHHHhcCcccccCCHHHHHHHHHHHhCccccCcceeEEEEcCChhhc
Confidence            9999999998754332111111 111223567788999999999965443 345678888777765443

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.95  E-value=9.3e-28  Score=199.68  Aligned_cols=185  Identities=15%  Similarity=0.140  Sum_probs=148.5

Q ss_pred             EEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC------CCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           13 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        13 ~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      +.++.||+++.++++++++++.+      .++++|++|||||+..      +..+.+.++|+++|++|+.+++++++.++
T Consensus        62 ~~~~~~D~~~~~~v~~~~~~~~~------~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~  135 (258)
T PRK07533         62 PIFLPLDVREPGQLEAVFARIAE------EWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAE  135 (258)
T ss_pred             ceEEecCcCCHHHHHHHHHHHHH------HcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence            56899999999999999999988      6789999999999753      34567888999999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |+|++   .++||++||..+                    ..+.+....|+++|+++..++++|+.++.   +++|+||+
T Consensus       136 p~m~~---~g~Ii~iss~~~--------------------~~~~~~~~~Y~asKaal~~l~~~la~el~---~~gI~Vn~  189 (258)
T PRK07533        136 PLMTN---GGSLLTMSYYGA--------------------EKVVENYNLMGPVKAALESSVRYLAAELG---PKGIRVHA  189 (258)
T ss_pred             HHhcc---CCEEEEEecccc--------------------ccCCccchhhHHHHHHHHHHHHHHHHHhh---hcCcEEEE
Confidence            99964   579999999875                    23456677899999999999999999998   78999999


Q ss_pred             ecCCcccCCccCcchhHHHH-HHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCc
Q 024553          167 ADPGVVKTNIMREVPSFLSL-MAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  229 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~  229 (266)
                      |+||+|+|++.+........ .......+++++.+|+++|+.+++++.. +...+|..+..++|.
T Consensus       190 v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~L~s~~~~~itG~~i~vdgg~  254 (258)
T PRK07533        190 ISPGPLKTRAASGIDDFDALLEDAAERAPLRRLVDIDDVGAVAAFLASDAARRLTGNTLYIDGGY  254 (258)
T ss_pred             EecCCcCChhhhccCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhChhhccccCcEEeeCCcc
Confidence            99999999987543211111 1112223566788999999999965432 235678888776664

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.95  E-value=8.9e-28  Score=200.10  Aligned_cols=188  Identities=15%  Similarity=0.128  Sum_probs=149.9

Q ss_pred             EEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCC-------CCcCCCcccchhhhhhhhhHHHHHHhh
Q 024553           13 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT-------SSRLTPEGYDQMMSTNYIGAFFLTKLL   85 (266)
Q Consensus        13 ~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~-------~~~~~~~~~~~~~~~n~~~~~~l~~~~   85 (266)
                      ...++||+++.+++.++++++.+      .++++|++|||||+...       ..+.+.+.|+.++++|+.+++++++.+
T Consensus        58 ~~~~~~Dv~~~~~v~~~~~~~~~------~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~  131 (261)
T PRK08690         58 ELVFRCDVASDDEINQVFADLGK------HWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAA  131 (261)
T ss_pred             ceEEECCCCCHHHHHHHHHHHHH------HhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHH
Confidence            56899999999999999999998      66899999999998632       134567789999999999999999999


Q ss_pred             HHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEE
Q 024553           86 LPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVI  165 (266)
Q Consensus        86 ~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~  165 (266)
                      +|+|+++  .++||++||.++.                    .+.++...|+++|+++..++++++.++.   +++|+||
T Consensus       132 ~p~m~~~--~g~Iv~iss~~~~--------------------~~~~~~~~Y~asKaal~~l~~~la~e~~---~~gIrVn  186 (261)
T PRK08690        132 RPMMRGR--NSAIVALSYLGAV--------------------RAIPNYNVMGMAKASLEAGIRFTAACLG---KEGIRCN  186 (261)
T ss_pred             HHHhhhc--CcEEEEEcccccc--------------------cCCCCcccchhHHHHHHHHHHHHHHHhh---hcCeEEE
Confidence            9999754  4799999998762                    3556778899999999999999999998   7899999


Q ss_pred             EecCCcccCCccCcchhHHH-HHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCccc
Q 024553          166 AADPGVVKTNIMREVPSFLS-LMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  231 (266)
Q Consensus       166 ~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~  231 (266)
                      .|+||+|+|++......... ........+++++.+|+|+|+.+++++.. +...+|..+..++|..+
T Consensus       187 ~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~l~s~~~~~~tG~~i~vdgG~~~  254 (261)
T PRK08690        187 GISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVTIEEVGNTAAFLLSDLSSGITGEITYVDGGYSI  254 (261)
T ss_pred             EEecCcccchhhhcCCchHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCcccCCcceeEEEEcCCccc
Confidence            99999999998654321111 11112223667888999999999965442 24567888887777543

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.5e-27  Score=199.02  Aligned_cols=191  Identities=17%  Similarity=0.207  Sum_probs=153.0

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.+|+++.++++++++++.+       ++++|++|||||...  +..+.+.++|++++++|+.+++.+++.++|
T Consensus        57 ~~~~~~~~~Dv~~~~~i~~~~~~~~~-------~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~  129 (263)
T PRK08339         57 NVDVSYIVADLTKREDLERTVKELKN-------IGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVP  129 (263)
T ss_pred             CCceEEEEecCCCHHHHHHHHHHHHh-------hCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            34688999999999999999999854       578999999999763  456778899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++++ .|+||++||.++.                    .+.+....|+++|+++..++++++.++.   +.||+||+|
T Consensus       130 ~m~~~~-~g~Ii~isS~~~~--------------------~~~~~~~~y~asKaal~~l~~~la~el~---~~gIrVn~v  185 (263)
T PRK08339        130 AMERKG-FGRIIYSTSVAIK--------------------EPIPNIALSNVVRISMAGLVRTLAKELG---PKGITVNGI  185 (263)
T ss_pred             HHHHcC-CCEEEEEcCcccc--------------------CCCCcchhhHHHHHHHHHHHHHHHHHhc---ccCeEEEEE
Confidence            998876 7899999998862                    3556677899999999999999999998   789999999


Q ss_pred             cCCcccCCccCcchh----------HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCccc
Q 024553          168 DPGVVKTNIMREVPS----------FLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  231 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~----------~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~  231 (266)
                      +||+|+|++......          ...........+++++.+|+++|+.+++++.. +...+|..+..++|...
T Consensus       186 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~s~~~~~itG~~~~vdgG~~~  260 (263)
T PRK08339        186 MPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLVAFLASDLGSYINGAMIPVDGGRLN  260 (263)
T ss_pred             EeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHHHHHHHHHHHhcchhcCccCceEEECCCccc
Confidence            999999997543211          11111112223567888999999999954432 23567888877776544

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.95  E-value=1.1e-27  Score=200.57  Aligned_cols=186  Identities=15%  Similarity=0.155  Sum_probs=149.2

Q ss_pred             EEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC------CCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           13 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        13 ~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      ..+++||+++.++++++++++.+      .++++|++|||||+..      +..+.+.++|+++|++|+.+++.+++.++
T Consensus        62 ~~~~~~Dl~~~~~v~~~~~~~~~------~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~  135 (272)
T PRK08159         62 FVAGHCDVTDEASIDAVFETLEK------KWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAE  135 (272)
T ss_pred             ceEEecCCCCHHHHHHHHHHHHH------hcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHH
Confidence            56799999999999999999988      6789999999999863      34567888999999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |+|++   +|+||+++|.++                    ..+.+....|+++|+++..++++++.++.   +.+|+||+
T Consensus       136 ~~~~~---~g~Iv~iss~~~--------------------~~~~p~~~~Y~asKaal~~l~~~la~el~---~~gIrVn~  189 (272)
T PRK08159        136 KLMTD---GGSILTLTYYGA--------------------EKVMPHYNVMGVAKAALEASVKYLAVDLG---PKNIRVNA  189 (272)
T ss_pred             HhcCC---CceEEEEecccc--------------------ccCCCcchhhhhHHHHHHHHHHHHHHHhc---ccCeEEEE
Confidence            99965   589999999875                    23566778899999999999999999998   78999999


Q ss_pred             ecCCcccCCccCcchhHHHHHHH-HHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCcc
Q 024553          167 ADPGVVKTNIMREVPSFLSLMAF-TVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  230 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~  230 (266)
                      |+||+++|++............. ....+++++.+|+|+|+.+++++.. +...+|..+..++|..
T Consensus       190 v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~~~~L~s~~~~~itG~~i~vdgG~~  255 (272)
T PRK08159        190 ISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIEEVGDSALYLLSDLSRGVTGEVHHVDSGYH  255 (272)
T ss_pred             eecCCcCCHHHhcCCcchHHHHHHHhCCcccccCCHHHHHHHHHHHhCccccCccceEEEECCCce
Confidence            99999999875433221111111 1123566778999999999965432 2356898888777754

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.95  E-value=2.6e-27  Score=196.27  Aligned_cols=190  Identities=17%  Similarity=0.188  Sum_probs=151.2

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.+|+++.++++++++++.+      .++++|++|||||+..  +..+.+.++|++++++|+.+++.+++.++|
T Consensus        54 ~~~~~~~~~Dl~~~~~~~~~~~~~~~------~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~  127 (251)
T PRK12481         54 GRKFHFITADLIQQKDIDSIVSQAVE------VMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAK  127 (251)
T ss_pred             CCeEEEEEeCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHH
Confidence            35688999999999999999999988      6689999999999863  455678899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++++..|+||++||..+..                    +.+....|+++|+++..++++++.++.   +.||+||.|
T Consensus       128 ~~~~~~~~g~ii~isS~~~~~--------------------~~~~~~~Y~asK~a~~~l~~~la~e~~---~~girvn~v  184 (251)
T PRK12481        128 QFVKQGNGGKIINIASMLSFQ--------------------GGIRVPSYTASKSAVMGLTRALATELS---QYNINVNAI  184 (251)
T ss_pred             HHHHcCCCCEEEEeCChhhcC--------------------CCCCCcchHHHHHHHHHHHHHHHHHHh---hcCeEEEEE
Confidence            998754358999999988632                    344556899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHH-HHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCC
Q 024553          168 DPGVVKTNIMREVPSFLS-LMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKG  228 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g  228 (266)
                      +||+++|++......... ........+.+++.+|+|+|+.+++++.. +...+|..+..++|
T Consensus       185 ~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~peeva~~~~~L~s~~~~~~~G~~i~vdgg  247 (251)
T PRK12481        185 APGYMATDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFLSSSASDYVTGYTLAVDGG  247 (251)
T ss_pred             ecCCCccCchhhcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCceEEECCC
Confidence            999999998764321111 11111223556788999999999954432 23456777766665

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.95  E-value=2.4e-26  Score=197.22  Aligned_cols=238  Identities=26%  Similarity=0.372  Sum_probs=172.0

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCC---CCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT---SSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      +.++.++.+|+++.++++++++++.+      ..+++|+||||||+..+   ....+.++++.++++|+.|++.+++.++
T Consensus        54 ~~~~~~~~~Dl~~~~~v~~~~~~~~~------~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~  127 (322)
T PRK07453         54 PDSYTIIHIDLGDLDSVRRFVDDFRA------LGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLL  127 (322)
T ss_pred             CCceEEEEecCCCHHHHHHHHHHHHH------hCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHH
Confidence            34688999999999999999999877      56789999999998643   2356788999999999999999999999


Q ss_pred             HHHhcCCC-CCeEEEEcCCcccccc-------cccCCccccccC--------cccCCCCCChhhcchHhHHHHHHHHHHH
Q 024553           87 PLLKNSPV-PSRIVNVTSFTHRNVF-------NAQVNNETITGK--------FFLRSKCYPCARIYEYSKLCLLIFSYEL  150 (266)
Q Consensus        87 ~~l~~~~~-~~~iv~vsS~~~~~~~-------~~~~~~~~~~~~--------~~~~~~~~~~~~~Y~~sK~~~~~~~~~l  150 (266)
                      |.|++++. .++||++||..+....       +...+..++...        ...+..++.+..+|+.||.++..+++.+
T Consensus       128 ~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~l  207 (322)
T PRK07453        128 EDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMREL  207 (322)
T ss_pred             HHHHhCCCCCceEEEEcccccCccccCCccCCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHH
Confidence            99987652 2699999998764311       001111111100        0001234556788999999999999999


Q ss_pred             HHhhCCCCCCCeEEEEecCCcc-cCCccCcchhHHHHHHHHH-HHHhhcCCCHHHHHHHHHHHhcCCC-CcccceeecCC
Q 024553          151 HRNLGLDKSRHVSVIAADPGVV-KTNIMREVPSFLSLMAFTV-LKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGK  227 (266)
Q Consensus       151 a~~~~~~~~~~i~v~~v~PG~v-~T~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~a~~~~~~~~~~~-~~~G~~~~~~~  227 (266)
                      ++++..  ..+|++++++||+| .|++.++.+.......... ........+++..++.+++++..+. ..+|.||..+.
T Consensus       208 a~~~~~--~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~~  285 (322)
T PRK07453        208 HRRYHE--STGITFSSLYPGCVADTPLFRNTPPLFQKLFPWFQKNITGGYVSQELAGERVAQVVADPEFAQSGVHWSWGN  285 (322)
T ss_pred             HHhhcc--cCCeEEEEecCCcccCCcccccCCHHHHHHHHHHHHHHhhceecHHHHhhHHHHhhcCcccCCCCceeecCC
Confidence            999841  46899999999999 5998776543222211111 1112234589999999988777664 45899987322


Q ss_pred             Cc-------cccCCccccCHHHHHHHHHHHHHHhh
Q 024553          228 GR-------TVNSSALSFNSKLAGELWTTSCNLFI  255 (266)
Q Consensus       228 g~-------~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (266)
                      ..       ...++..+.|++.+++||+.|+++++
T Consensus       286 ~~~~~~~~~~~~~~~~a~d~~~~~~lw~~s~~~~~  320 (322)
T PRK07453        286 RQKKDRKAFSQELSDRATDDDKARRLWDLSAKLVG  320 (322)
T ss_pred             CCCcCccccccccchhhcCHHHHHHHHHHHHHHhC
Confidence            11       13466778999999999999999876

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.95  E-value=3.5e-27  Score=195.96  Aligned_cols=186  Identities=18%  Similarity=0.231  Sum_probs=145.9

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC------CCCcCCCcccchhhhhhhhhHHHHHHhh
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLL   85 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~------~~~~~~~~~~~~~~~~n~~~~~~l~~~~   85 (266)
                      ++.++.||+++.++++++++++.+      .++++|++|||||+..      +..+.+.++|++++++|+.+++++++.+
T Consensus        58 ~~~~~~~Dv~~~~~i~~~~~~~~~------~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~  131 (256)
T PRK07889         58 PAPVLELDVTNEEHLASLADRVRE------HVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKAL  131 (256)
T ss_pred             CCcEEeCCCCCHHHHHHHHHHHHH------HcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence            577999999999999999999988      6689999999999862      3445677889999999999999999999


Q ss_pred             HHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEE
Q 024553           86 LPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVI  165 (266)
Q Consensus        86 ~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~  165 (266)
                      +|+|++   .|+||+++|...                     ...+.+..|++||+++..|+++|+.++.   +++|+||
T Consensus       132 ~~~m~~---~g~Iv~is~~~~---------------------~~~~~~~~Y~asKaal~~l~~~la~el~---~~gIrvn  184 (256)
T PRK07889        132 LPLMNE---GGSIVGLDFDAT---------------------VAWPAYDWMGVAKAALESTNRYLARDLG---PRGIRVN  184 (256)
T ss_pred             HHhccc---CceEEEEeeccc---------------------ccCCccchhHHHHHHHHHHHHHHHHHhh---hcCeEEE
Confidence            999974   579999986532                     2345566799999999999999999998   7899999


Q ss_pred             EecCCcccCCccCcchhHHHH-HHHHHHHHhh-cCCCHHHHHHHHHHHhcC-CCCcccceeecCCCcc
Q 024553          166 AADPGVVKTNIMREVPSFLSL-MAFTVLKLLG-LLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  230 (266)
Q Consensus       166 ~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~-~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~  230 (266)
                      +|+||+++|++....+..... .......+++ ++.+|+++|+.+++++.. +...+|.++..++|..
T Consensus       185 ~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~evA~~v~~l~s~~~~~~tG~~i~vdgg~~  252 (256)
T PRK07889        185 LVAAGPIRTLAAKAIPGFELLEEGWDERAPLGWDVKDPTPVARAVVALLSDWFPATTGEIVHVDGGAH  252 (256)
T ss_pred             eeccCcccChhhhcccCcHHHHHHHHhcCccccccCCHHHHHHHHHHHhCcccccccceEEEEcCcee
Confidence            999999999986543221111 1111122444 467999999999965433 2356788887776643

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.95  E-value=6e-27  Score=194.97  Aligned_cols=193  Identities=23%  Similarity=0.251  Sum_probs=153.9

Q ss_pred             CCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553            9 KDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus         9 ~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      .+.++.++.||+++.+++..+++++.+      .++++|++|||||..  .+..+.+.++|++++++|+.+++.+++.++
T Consensus        56 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~------~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  129 (260)
T PRK07063         56 AGARVLAVPADVTDAASVAAAVAAAEE------AFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVL  129 (260)
T ss_pred             CCceEEEEEccCCCHHHHHHHHHHHHH------HhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHH
Confidence            355789999999999999999999988      678999999999975  344566788999999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |.|++++ .++||++||..+.                    .+.+...+|+.+|+++..++++++.++.   +.+|+||+
T Consensus       130 ~~~~~~~-~g~iv~isS~~~~--------------------~~~~~~~~Y~~sKaa~~~~~~~la~el~---~~gIrvn~  185 (260)
T PRK07063        130 PGMVERG-RGSIVNIASTHAF--------------------KIIPGCFPYPVAKHGLLGLTRALGIEYA---ARNVRVNA  185 (260)
T ss_pred             HHHHhhC-CeEEEEECChhhc--------------------cCCCCchHHHHHHHHHHHHHHHHHHHhC---ccCeEEEE
Confidence            9998766 6899999998763                    3455667899999999999999999998   78999999


Q ss_pred             ecCCcccCCccCcch----hHH-HHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCccc
Q 024553          167 ADPGVVKTNIMREVP----SFL-SLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  231 (266)
Q Consensus       167 v~PG~v~T~~~~~~~----~~~-~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~  231 (266)
                      |+||+++|++.....    ... .........+++++.+|+++|+.+++++.. +...+|..+..++|...
T Consensus       186 v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~va~~~~fl~s~~~~~itG~~i~vdgg~~~  256 (260)
T PRK07063        186 IAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAVFLASDEAPFINATCITIDGGRSV  256 (260)
T ss_pred             EeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccccCCcEEEECCCeee
Confidence            999999999865321    111 111112233567788999999999964432 23457888777776543

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.95  E-value=5.7e-27  Score=195.19  Aligned_cols=186  Identities=14%  Similarity=0.121  Sum_probs=146.2

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCC-------CCcCCCcccchhhhhhhhhHHHHHHh
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT-------SSRLTPEGYDQMMSTNYIGAFFLTKL   84 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~-------~~~~~~~~~~~~~~~n~~~~~~l~~~   84 (266)
                      .+.++.||+++.++++++++++.+      .++++|++|||||+...       ..+.+.++|+.++++|+.+++.+++.
T Consensus        57 ~~~~~~~Dl~~~~~v~~~~~~~~~------~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~  130 (262)
T PRK07984         57 SDIVLPCDVAEDASIDAMFAELGK------VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKA  130 (262)
T ss_pred             CceEeecCCCCHHHHHHHHHHHHh------hcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHH
Confidence            467899999999999999999988      67899999999997632       23467788999999999999999999


Q ss_pred             hHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEE
Q 024553           85 LLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSV  164 (266)
Q Consensus        85 ~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v  164 (266)
                      +.|.+++   +|+||++||..+                    ..+.+.+..|+++|+++..++++++.++.   +++|+|
T Consensus       131 ~~~~~~~---~g~Iv~iss~~~--------------------~~~~~~~~~Y~asKaal~~l~~~la~el~---~~gIrV  184 (262)
T PRK07984        131 CRSMLNP---GSALLTLSYLGA--------------------ERAIPNYNVMGLAKASLEANVRYMANAMG---PEGVRV  184 (262)
T ss_pred             HHHHhcC---CcEEEEEecCCC--------------------CCCCCCcchhHHHHHHHHHHHHHHHHHhc---ccCcEE
Confidence            9997653   579999999876                    23556677899999999999999999998   789999


Q ss_pred             EEecCCcccCCccCcchhHHHH-HHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCc
Q 024553          165 IAADPGVVKTNIMREVPSFLSL-MAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  229 (266)
Q Consensus       165 ~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~  229 (266)
                      |+|+||+|+|++....+..... .......+++++.+|+++++.+++++.. +...+|..+..++|.
T Consensus       185 n~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgg~  251 (262)
T PRK07984        185 NAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGF  251 (262)
T ss_pred             eeeecCcccchHHhcCCchHHHHHHHHHcCCCcCCCCHHHHHHHHHHHcCcccccccCcEEEECCCc
Confidence            9999999999875433221111 1111223567788999999999954432 235578887766663

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.95  E-value=5.9e-27  Score=190.81  Aligned_cols=177  Identities=25%  Similarity=0.324  Sum_probs=149.9

Q ss_pred             hhcccCCCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHH
Q 024553            3 DITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFF   80 (266)
Q Consensus         3 ~i~~~~~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~   80 (266)
                      +|..++ +.++.++++|+++.+++.++.+++.+      ....||+||||||+.  +++.+.+.++.++++++|+.+.+.
T Consensus        49 ~l~~~~-~v~v~vi~~DLs~~~~~~~l~~~l~~------~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~  121 (265)
T COG0300          49 ELEDKT-GVEVEVIPADLSDPEALERLEDELKE------RGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTR  121 (265)
T ss_pred             HHHHhh-CceEEEEECcCCChhHHHHHHHHHHh------cCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHH
Confidence            455555 66899999999999999999999998      668999999999987  567889999999999999999999


Q ss_pred             HHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCC
Q 024553           81 LTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSR  160 (266)
Q Consensus        81 l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~  160 (266)
                      +++.++|.|.+++ .|.||+++|.++..                    +.+....|++||+++..|+.+|..|+.   +.
T Consensus       122 LT~~~lp~m~~~~-~G~IiNI~S~ag~~--------------------p~p~~avY~ATKa~v~~fSeaL~~EL~---~~  177 (265)
T COG0300         122 LTKAVLPGMVERG-AGHIINIGSAAGLI--------------------PTPYMAVYSATKAFVLSFSEALREELK---GT  177 (265)
T ss_pred             HHHHHHHHHHhcC-CceEEEEechhhcC--------------------CCcchHHHHHHHHHHHHHHHHHHHHhc---CC
Confidence            9999999999988 89999999999853                    567889999999999999999999997   89


Q ss_pred             CeEEEEecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC
Q 024553          161 HVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP  215 (266)
Q Consensus       161 ~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~  215 (266)
                      ||+|.+++||++.|++............     +...+.+|+++|+..+.++...
T Consensus       178 gV~V~~v~PG~~~T~f~~~~~~~~~~~~-----~~~~~~~~~~va~~~~~~l~~~  227 (265)
T COG0300         178 GVKVTAVCPGPTRTEFFDAKGSDVYLLS-----PGELVLSPEDVAEAALKALEKG  227 (265)
T ss_pred             CeEEEEEecCcccccccccccccccccc-----chhhccCHHHHHHHHHHHHhcC
Confidence            9999999999999999862111111100     1113459999999999877553

>PRK08589 short chain dehydrogenase; Validated

Probab=99.95  E-value=9.3e-27  Score=195.14  Aligned_cols=207  Identities=22%  Similarity=0.345  Sum_probs=159.0

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC---CCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      +.++.++.||+++.+++.++++++.+      .++++|+||||||+..   +..+.+.+.|++++++|+.+++.+++.++
T Consensus        53 ~~~~~~~~~Dl~~~~~~~~~~~~~~~------~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  126 (272)
T PRK08589         53 GGKAKAYHVDISDEQQVKDFASEIKE------QFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLL  126 (272)
T ss_pred             CCeEEEEEeecCCHHHHHHHHHHHHH------HcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            34689999999999999999999998      6789999999999863   34566788899999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |+|+++  +++||++||..+..                    +.+....|+++|+++..++++++.++.   +.+|+||+
T Consensus       127 ~~~~~~--~g~iv~isS~~~~~--------------------~~~~~~~Y~asKaal~~l~~~la~e~~---~~gI~v~~  181 (272)
T PRK08589        127 PLMMEQ--GGSIINTSSFSGQA--------------------ADLYRSGYNAAKGAVINFTKSIAIEYG---RDGIRANA  181 (272)
T ss_pred             HHHHHc--CCEEEEeCchhhcC--------------------CCCCCchHHHHHHHHHHHHHHHHHHhh---hcCeEEEE
Confidence            999865  38999999987632                    345567899999999999999999997   78999999


Q ss_pred             ecCCcccCCccCcchhHHH---HHHH----HHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCccccCCcccc
Q 024553          167 ADPGVVKTNIMREVPSFLS---LMAF----TVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVNSSALSF  238 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~~~~---~~~~----~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~~~~~~~~  238 (266)
                      |+||+|+|++.........   ...+    ....+++++.+|+++|+.+++++.. +...+|..+..++|....  . +.
T Consensus       182 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~vdgg~~~~--~-~~  258 (272)
T PRK08589        182 IAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDSSFITGETIRIDGGVMAY--T-WP  258 (272)
T ss_pred             EecCcccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCCcccC--C-CC
Confidence            9999999998765322110   0001    1122456778999999999965432 235689888777775432  1 22


Q ss_pred             CHHHHHHHHHHH
Q 024553          239 NSKLAGELWTTS  250 (266)
Q Consensus       239 ~~~~~~~~~~~~  250 (266)
                      +....+..|+.|
T Consensus       259 ~~~~~~~~~~~~  270 (272)
T PRK08589        259 GEMLSDDSWKRT  270 (272)
T ss_pred             Ccccccchhhhh
Confidence            333445566655

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.95  E-value=5.3e-28  Score=199.16  Aligned_cols=190  Identities=28%  Similarity=0.383  Sum_probs=155.6

Q ss_pred             hhhcccCCCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCC-CCcceeeEcCCCCC------CCCcCCCcccchhhhhh
Q 024553            2 ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMH-SSIQLLINNAGILA------TSSRLTPEGYDQMMSTN   74 (266)
Q Consensus         2 ~~i~~~~~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~-~~ld~lv~nAG~~~------~~~~~~~~~~~~~~~~n   74 (266)
                      +++.+.++ .+  ++.||++++++++++++++.+      .+ +++|+||||+|...      +..+.+.++|+.++++|
T Consensus        38 ~~l~~~~~-~~--~~~~D~~~~~~v~~~~~~~~~------~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (241)
T PF13561_consen   38 EELAKEYG-AE--VIQCDLSDEESVEALFDEAVE------RFGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDIN  108 (241)
T ss_dssp             HHHHHHTT-SE--EEESCTTSHHHHHHHHHHHHH------HHCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHH
T ss_pred             HHHHHHcC-Cc--eEeecCcchHHHHHHHHHHHh------hcCCCeEEEEecccccccccCCCChHhCCHHHHHHHHHHH
Confidence            34555554 33  599999999999999999999      56 89999999999764      33466788999999999


Q ss_pred             hhhHHHHHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhh
Q 024553           75 YIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNL  154 (266)
Q Consensus        75 ~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~  154 (266)
                      +.+++.+++.+.|+|++   +++||+++|..+                    ..+.+....|+.+|++++.+++++|.++
T Consensus       109 ~~~~~~~~~~~~~~~~~---~gsii~iss~~~--------------------~~~~~~~~~y~~sKaal~~l~r~lA~el  165 (241)
T PF13561_consen  109 VFSPFLLAQAALPLMKK---GGSIINISSIAA--------------------QRPMPGYSAYSASKAALEGLTRSLAKEL  165 (241)
T ss_dssp             THHHHHHHHHHHHHHHH---EEEEEEEEEGGG--------------------TSBSTTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhh---CCCcccccchhh--------------------cccCccchhhHHHHHHHHHHHHHHHHHh
Confidence            99999999999999888   579999999876                    3456777899999999999999999999


Q ss_pred             CCCCC-CCeEEEEecCCcccCCccCcchhHH-HHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC---CcccceeecCCC
Q 024553          155 GLDKS-RHVSVIAADPGVVKTNIMREVPSFL-SLMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKG  228 (266)
Q Consensus       155 ~~~~~-~~i~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~---~~~G~~~~~~~g  228 (266)
                      +   + +|||||+|+||+++|++........ .........|++++.+|+|+|+.++  +|.++   ..+|..+..++|
T Consensus       166 ~---~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~evA~~v~--fL~s~~a~~itG~~i~vDGG  239 (241)
T PF13561_consen  166 A---PKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLGRLGTPEEVANAVL--FLASDAASYITGQVIPVDGG  239 (241)
T ss_dssp             G---GHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHHHHHHHHH--HHHSGGGTTGTSEEEEESTT
T ss_pred             c---cccCeeeeeecccceeccchhccccccchhhhhhhhhccCCCcCHHHHHHHHH--HHhCccccCccCCeEEECCC
Confidence            8   7 8999999999999999865543222 2223345567888889999999999  45454   457888877776

...

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.95  E-value=9.3e-27  Score=189.39  Aligned_cols=169  Identities=21%  Similarity=0.284  Sum_probs=147.2

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      +++.+.||+|+.+++.++++++++      +.|.+|+||||||++.  +..+.+.+.+++++++|+.|+++.+++++|.|
T Consensus        87 ~~~~y~cdis~~eei~~~a~~Vk~------e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M  160 (300)
T KOG1201|consen   87 EAKAYTCDISDREEIYRLAKKVKK------EVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKM  160 (300)
T ss_pred             ceeEEEecCCCHHHHHHHHHHHHH------hcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHH
Confidence            799999999999999999999999      7899999999999983  56778899999999999999999999999999


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      .+.+ .|+||.++|.+|..                    +.++...|++||+|+.+|.++|..|+......+|+...|+|
T Consensus       161 ~~~~-~GHIV~IaS~aG~~--------------------g~~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P  219 (300)
T KOG1201|consen  161 LENN-NGHIVTIASVAGLF--------------------GPAGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCP  219 (300)
T ss_pred             HhcC-CceEEEehhhhccc--------------------CCccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEee
Confidence            9988 89999999999843                    67788999999999999999999998644567899999999


Q ss_pred             CcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC
Q 024553          170 GVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP  216 (266)
Q Consensus       170 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~  216 (266)
                      ++++|.+.....+...+         ....+|+++|+.++.+.+..+
T Consensus       220 ~~i~Tgmf~~~~~~~~l---------~P~L~p~~va~~Iv~ai~~n~  257 (300)
T KOG1201|consen  220 YFINTGMFDGATPFPTL---------APLLEPEYVAKRIVEAILTNQ  257 (300)
T ss_pred             eeccccccCCCCCCccc---------cCCCCHHHHHHHHHHHHHcCC
Confidence            99999998862221111         123499999999998887654

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.94  E-value=1.6e-26  Score=192.48  Aligned_cols=190  Identities=14%  Similarity=0.141  Sum_probs=151.4

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--------CCCcCCCcccchhhhhhhhhHHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--------TSSRLTPEGYDQMMSTNYIGAFFL   81 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--------~~~~~~~~~~~~~~~~n~~~~~~l   81 (266)
                      +.++.+++||+++.++++++++++.+      .++++|++|||||+..        +..+.+.++++.++++|+.+++.+
T Consensus        58 ~~~~~~~~~D~~~~~~~~~~~~~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  131 (260)
T PRK08416         58 GIKAKAYPLNILEPETYKELFKKIDE------DFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVG  131 (260)
T ss_pred             CCceEEEEcCCCCHHHHHHHHHHHHH------hcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHH
Confidence            45789999999999999999999988      6789999999998642        334567788999999999999999


Q ss_pred             HHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCC
Q 024553           82 TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRH  161 (266)
Q Consensus        82 ~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~  161 (266)
                      ++.++|.|++.+ .++||++||..+.                    .+.+....|+++|++++.++++++.++.   +++
T Consensus       132 ~~~~~~~~~~~~-~g~iv~isS~~~~--------------------~~~~~~~~Y~asK~a~~~~~~~la~el~---~~g  187 (260)
T PRK08416        132 AQEAAKRMEKVG-GGSIISLSSTGNL--------------------VYIENYAGHGTSKAAVETMVKYAATELG---EKN  187 (260)
T ss_pred             HHHHHHhhhccC-CEEEEEEeccccc--------------------cCCCCcccchhhHHHHHHHHHHHHHHhh---hhC
Confidence            999999998766 7899999998752                    2455667899999999999999999997   789


Q ss_pred             eEEEEecCCcccCCccCcchhHHH-HHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          162 VSVIAADPGVVKTNIMREVPSFLS-LMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       162 i~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      |+|++|+||+++|++....+.... ........+++++.+|+++|+.+++++... ...+|..+..++|.
T Consensus       188 i~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~~~~~~~~~G~~i~vdgg~  257 (260)
T PRK08416        188 IRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQPEDLAGACLFLCSEKASWLTGQTIVVDGGT  257 (260)
T ss_pred             eEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhhcccCcEEEEcCCe
Confidence            999999999999998665432111 111222235667889999999999654322 24578887766553

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.94  E-value=7.7e-27  Score=191.48  Aligned_cols=147  Identities=27%  Similarity=0.345  Sum_probs=127.5

Q ss_pred             hhhcccCCCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHH
Q 024553            2 ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAF   79 (266)
Q Consensus         2 ~~i~~~~~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~   79 (266)
                      +++.+..+..++++++||+++++++.++++++..      .++++|+||||||+..  .....+.+++..+|++|++|++
T Consensus        54 ~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~------~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V  127 (282)
T KOG1205|consen   54 EELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIR------HFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTV  127 (282)
T ss_pred             HHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHH------hcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhH
Confidence            3455555444699999999999999999999998      7799999999999974  3345677889999999999999


Q ss_pred             HHHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCC
Q 024553           80 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKS  159 (266)
Q Consensus        80 ~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~  159 (266)
                      .+++.++|+|++++ .|+||+++|++|+.                    ++|....|++||+|+.+|+.+|..|+.   +
T Consensus       128 ~~Tk~alp~m~~r~-~GhIVvisSiaG~~--------------------~~P~~~~Y~ASK~Al~~f~etLR~El~---~  183 (282)
T KOG1205|consen  128 YLTKAALPSMKKRN-DGHIVVISSIAGKM--------------------PLPFRSIYSASKHALEGFFETLRQELI---P  183 (282)
T ss_pred             HHHHHHHHHhhhcC-CCeEEEEecccccc--------------------CCCcccccchHHHHHHHHHHHHHHHhh---c
Confidence            99999999999987 89999999999843                    677777999999999999999999997   5


Q ss_pred             CC--eEEEEecCCcccCCccCc
Q 024553          160 RH--VSVIAADPGVVKTNIMRE  179 (266)
Q Consensus       160 ~~--i~v~~v~PG~v~T~~~~~  179 (266)
                      .+  |++ .|+||+|+|++...
T Consensus       184 ~~~~i~i-~V~PG~V~Te~~~~  204 (282)
T KOG1205|consen  184 LGTIIII-LVSPGPIETEFTGK  204 (282)
T ss_pred             cCceEEE-EEecCceeecccch
Confidence            55  555 99999999997755

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.94  E-value=2.6e-26  Score=193.80  Aligned_cols=188  Identities=13%  Similarity=0.092  Sum_probs=145.5

Q ss_pred             EEEEEecC--CC------------------HHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC----CCCCcCCCcccc
Q 024553           13 LEAFQVDL--SS------------------FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL----ATSSRLTPEGYD   68 (266)
Q Consensus        13 ~~~i~~Dl--s~------------------~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~----~~~~~~~~~~~~   68 (266)
                      ...+.+|+  ++                  .++++++++++.+      .++++|+||||||..    .+..+.+.++|+
T Consensus        74 ~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~------~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~  147 (303)
T PLN02730         74 TKVYPLDAVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKA------DFGSIDILVHSLANGPEVTKPLLETSRKGYL  147 (303)
T ss_pred             CeeeecceecCccccCchhhhcccccccCCHHHHHHHHHHHHH------HcCCCCEEEECCCccccCCCChhhCCHHHHH
Confidence            46889999  43                  3489999999988      678999999999753    456678899999


Q ss_pred             hhhhhhhhhHHHHHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChh-hcchHhHHHHHHHH
Q 024553           69 QMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCA-RIYEYSKLCLLIFS  147 (266)
Q Consensus        69 ~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~~~~~~~  147 (266)
                      ++|++|+.+++.+++.++|.|++   .|+||++||..+.                    .+.+.. ..|+++|+++..|+
T Consensus       148 ~~~~vN~~~~~~l~~~~~p~m~~---~G~II~isS~a~~--------------------~~~p~~~~~Y~asKaAl~~l~  204 (303)
T PLN02730        148 AAISASSYSFVSLLQHFGPIMNP---GGASISLTYIASE--------------------RIIPGYGGGMSSAKAALESDT  204 (303)
T ss_pred             HHHHHHhHHHHHHHHHHHHHHhc---CCEEEEEechhhc--------------------CCCCCCchhhHHHHHHHHHHH
Confidence            99999999999999999999976   4899999998863                    234433 47999999999999


Q ss_pred             HHHHHhhCCCCC-CCeEEEEecCCcccCCccCcchhHHHH-HHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceee
Q 024553          148 YELHRNLGLDKS-RHVSVIAADPGVVKTNIMREVPSFLSL-MAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFF  224 (266)
Q Consensus       148 ~~la~~~~~~~~-~~i~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~  224 (266)
                      ++|+.++.   + ++|+||+|+||+|+|++....+..... .......+++++.+|++++..+++++.. +...+|..+.
T Consensus       205 ~~la~El~---~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~  281 (303)
T PLN02730        205 RVLAFEAG---RKYKIRVNTISAGPLGSRAAKAIGFIDDMIEYSYANAPLQKELTADEVGNAAAFLASPLASAITGATIY  281 (303)
T ss_pred             HHHHHHhC---cCCCeEEEEEeeCCccCchhhcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEE
Confidence            99999996   5 699999999999999987653211111 1111122456778999999999955432 2345788887


Q ss_pred             cCCCcccc
Q 024553          225 GGKGRTVN  232 (266)
Q Consensus       225 ~~~g~~~~  232 (266)
                      .++|-...
T Consensus       282 vdGG~~~~  289 (303)
T PLN02730        282 VDNGLNAM  289 (303)
T ss_pred             ECCCcccc
Confidence            77665443

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.94  E-value=3.2e-26  Score=189.88  Aligned_cols=190  Identities=18%  Similarity=0.242  Sum_probs=150.4

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.+|+++.+++.++++++.+      .++++|+||||||...  +..+.+.++|++++++|+.+++.+++.++|.
T Consensus        58 ~~~~~~~~D~~~~~~~~~~~~~~~~------~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  131 (253)
T PRK05867         58 GKVVPVCCDVSQHQQVTSMLDQVTA------ELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKA  131 (253)
T ss_pred             CeEEEEEccCCCHHHHHHHHHHHHH------HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHH
Confidence            4688999999999999999999988      6689999999999863  4556778899999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |.+++.+++||++||..+...                  ........|+++|+++..+++++++++.   +.+|+||+|+
T Consensus       132 ~~~~~~~g~iv~~sS~~~~~~------------------~~~~~~~~Y~asKaal~~~~~~la~e~~---~~gI~vn~i~  190 (253)
T PRK05867        132 MVKQGQGGVIINTASMSGHII------------------NVPQQVSHYCASKAAVIHLTKAMAVELA---PHKIRVNSVS  190 (253)
T ss_pred             HHhcCCCcEEEEECcHHhcCC------------------CCCCCccchHHHHHHHHHHHHHHHHHHh---HhCeEEEEee
Confidence            987653579999999875320                  0112346799999999999999999997   7899999999


Q ss_pred             CCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCc
Q 024553          169 PGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  229 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~  229 (266)
                      ||+|+|++.........  ......+++++.+|+++|+.+++++.. +...+|..+..++|.
T Consensus       191 PG~v~t~~~~~~~~~~~--~~~~~~~~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgG~  250 (253)
T PRK05867        191 PGYILTELVEPYTEYQP--LWEPKIPLGRLGRPEELAGLYLYLASEASSYMTGSDIVIDGGY  250 (253)
T ss_pred             cCCCCCcccccchHHHH--HHHhcCCCCCCcCHHHHHHHHHHHcCcccCCcCCCeEEECCCc
Confidence            99999998765432211  112223567788999999999954432 234578877777664

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.94  E-value=3.8e-26  Score=189.53  Aligned_cols=191  Identities=17%  Similarity=0.157  Sum_probs=151.4

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.+|++++++++++++++.+      .++++|++|||||...  +..+.+.++|++++++|+.+++.+++.+++.
T Consensus        58 ~~~~~~~~D~~~~~~i~~~~~~~~~------~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  131 (254)
T PRK06114         58 RRAIQIAADVTSKADLRAAVARTEA------ELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARA  131 (254)
T ss_pred             CceEEEEcCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHH
Confidence            4688999999999999999999988      6789999999999863  4556788999999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |++++ .++||++||..+...                  .+......|+.+|+++..++++++.++.   +.+|+||+|+
T Consensus       132 ~~~~~-~~~iv~isS~~~~~~------------------~~~~~~~~Y~~sKaa~~~l~~~la~e~~---~~gi~v~~v~  189 (254)
T PRK06114        132 MLENG-GGSIVNIASMSGIIV------------------NRGLLQAHYNASKAGVIHLSKSLAMEWV---GRGIRVNSIS  189 (254)
T ss_pred             HHhcC-CcEEEEECchhhcCC------------------CCCCCcchHHHHHHHHHHHHHHHHHHHh---hcCeEEEEEe
Confidence            98776 789999999876321                  1111246799999999999999999997   7899999999


Q ss_pred             CCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCc
Q 024553          169 PGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  229 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~  229 (266)
                      ||+++|++.................+++++.+|+|+|+.+++++.. +...+|..+..++|.
T Consensus       190 PG~i~t~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~~tG~~i~~dgg~  251 (254)
T PRK06114        190 PGYTATPMNTRPEMVHQTKLFEEQTPMQRMAKVDEMVGPAVFLLSDAASFCTGVDLLVDGGF  251 (254)
T ss_pred             ecCccCcccccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCCceEEECcCE
Confidence            9999999865311111111122334677888999999999964432 235578877766664

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.94  E-value=5.4e-26  Score=188.85  Aligned_cols=185  Identities=18%  Similarity=0.198  Sum_probs=151.6

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.+++||+++.+++.++++++.+      ..+++|++|||||..  .+..+.+.++|++++++|+.+++.+++.++|
T Consensus        67 g~~~~~~~~D~~~~~~i~~~~~~~~~------~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  140 (256)
T PRK12859         67 GVKVSSMELDLTQNDAPKELLNKVTE------QLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFAR  140 (256)
T ss_pred             CCeEEEEEcCCCCHHHHHHHHHHHHH------HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            45788999999999999999999988      678999999999976  3456788899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++++ .|+||++||..+.                    .+.++...|+++|+++..++++++.++.   +++|+|++|
T Consensus       141 ~~~~~~-~g~iv~isS~~~~--------------------~~~~~~~~Y~~sK~a~~~l~~~la~~~~---~~~i~v~~v  196 (256)
T PRK12859        141 GFDKKS-GGRIINMTSGQFQ--------------------GPMVGELAYAATKGAIDALTSSLAAEVA---HLGITVNAI  196 (256)
T ss_pred             HHhhcC-CeEEEEEcccccC--------------------CCCCCchHHHHHHHHHHHHHHHHHHHhh---hhCeEEEEE
Confidence            998766 7899999998862                    3566778999999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCC
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKG  228 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g  228 (266)
                      +||+++|++....   . ........+++++.+|+++|+.+++++.. +...+|.++..++|
T Consensus       197 ~PG~i~t~~~~~~---~-~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgg  254 (256)
T PRK12859        197 NPGPTDTGWMTEE---I-KQGLLPMFPFGRIGEPKDAARLIKFLASEEAEWITGQIIHSEGG  254 (256)
T ss_pred             EEccccCCCCCHH---H-HHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEeCCC
Confidence            9999999875421   1 11111222445677999999999965433 23568888877665

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.94  E-value=4e-26  Score=190.50  Aligned_cols=196  Identities=22%  Similarity=0.228  Sum_probs=154.3

Q ss_pred             hcccCCCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHH
Q 024553            4 ITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFL   81 (266)
Q Consensus         4 i~~~~~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l   81 (266)
                      +.+.+++.++.++.+|+++.+++.++++++.+      .++++|+||||||..  .+..+.+.+.|++.+++|+.+++.+
T Consensus        52 ~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~------~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  125 (265)
T PRK07062         52 LREKFPGARLLAARCDVLDEADVAAFAAAVEA------RFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINP  125 (265)
T ss_pred             HHhhCCCceEEEEEecCCCHHHHHHHHHHHHH------hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHH
Confidence            33445556789999999999999999999988      678999999999986  3455677888999999999999999


Q ss_pred             HHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCC
Q 024553           82 TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRH  161 (266)
Q Consensus        82 ~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~  161 (266)
                      ++.++|.|++++ .++||++||..+.                    .+.+....|+++|+++..++++++.++.   +.+
T Consensus       126 ~~~~~~~~~~~~-~g~iv~isS~~~~--------------------~~~~~~~~y~asKaal~~~~~~la~e~~---~~g  181 (265)
T PRK07062        126 TRAFLPLLRASA-AASIVCVNSLLAL--------------------QPEPHMVATSAARAGLLNLVKSLATELA---PKG  181 (265)
T ss_pred             HHHHHHHHhccC-CcEEEEecccccc--------------------CCCCCchHhHHHHHHHHHHHHHHHHHhh---hcC
Confidence            999999998876 7899999998863                    2445667899999999999999999997   789


Q ss_pred             eEEEEecCCcccCCccCcchhH--------HHHHHH---HHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCc
Q 024553          162 VSVIAADPGVVKTNIMREVPSF--------LSLMAF---TVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  229 (266)
Q Consensus       162 i~v~~v~PG~v~T~~~~~~~~~--------~~~~~~---~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~  229 (266)
                      |+||+|+||+|+|++.......        ..+...   ....+++++.+|+++|+.+++++.. +...+|..+..++|.
T Consensus       182 i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgg~  261 (265)
T PRK07062        182 VRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAARALFFLASPLSSYTTGSHIDVSGGF  261 (265)
T ss_pred             eEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHHhCchhcccccceEEEcCce
Confidence            9999999999999986432110        011000   0112456788999999999964432 235678887766663

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.94  E-value=5.6e-26  Score=188.44  Aligned_cols=190  Identities=17%  Similarity=0.197  Sum_probs=151.2

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.+|+++.++++++++++.+      .++++|++|||||...  +..+.+.++|++++++|+.+++.+++.++|
T Consensus        56 ~~~~~~~~~Dl~~~~~~~~~~~~~~~------~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  129 (253)
T PRK08993         56 GRRFLSLTADLRKIDGIPALLERAVA------EFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAK  129 (253)
T ss_pred             CCeEEEEECCCCCHHHHHHHHHHHHH------HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            34688999999999999999999988      6789999999999863  355677889999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++++.+|+||++||..+..                    +.+....|+.+|++++.++++++.++.   +.||+|+.|
T Consensus       130 ~~~~~~~~g~iv~isS~~~~~--------------------~~~~~~~Y~~sKaa~~~~~~~la~e~~---~~gi~v~~v  186 (253)
T PRK08993        130 HFIAQGNGGKIINIASMLSFQ--------------------GGIRVPSYTASKSGVMGVTRLMANEWA---KHNINVNAI  186 (253)
T ss_pred             HHHhCCCCeEEEEECchhhcc--------------------CCCCCcchHHHHHHHHHHHHHHHHHhh---hhCeEEEEE
Confidence            998764368999999987632                    344557899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHH-HHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCC
Q 024553          168 DPGVVKTNIMREVPSFLS-LMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKG  228 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g  228 (266)
                      +||+++|++......... ........+.+++.+|+++|+.+++++... ...+|..+..++|
T Consensus       187 ~pG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~~~~~~G~~~~~dgg  249 (253)
T PRK08993        187 APGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLASSASDYINGYTIAVDGG  249 (253)
T ss_pred             eeCcccCcchhhhccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence            999999998754321111 111122335567889999999999544322 2457887776655

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.94  E-value=9.2e-26  Score=187.48  Aligned_cols=188  Identities=22%  Similarity=0.241  Sum_probs=147.2

Q ss_pred             CCCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCC----cceeeEcCCCCCC----CCcC-CCcccchhhhhhhhhH
Q 024553            8 NKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSS----IQLLINNAGILAT----SSRL-TPEGYDQMMSTNYIGA   78 (266)
Q Consensus         8 ~~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~----ld~lv~nAG~~~~----~~~~-~~~~~~~~~~~n~~~~   78 (266)
                      .++.++.++.||+++.++++++++++.+      .++.    .|+||||||....    ..+. +.++|+++|++|+.++
T Consensus        52 ~~~~~v~~~~~Dl~~~~~v~~~~~~~~~------~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~  125 (256)
T TIGR01500        52 RSGLRVVRVSLDLGAEAGLEQLLKALRE------LPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSM  125 (256)
T ss_pred             CCCceEEEEEeccCCHHHHHHHHHHHHh------ccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHH
Confidence            3456789999999999999999999987      3333    3699999997532    1222 3578999999999999


Q ss_pred             HHHHHhhHHHHhcCC-CCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCC
Q 024553           79 FFLTKLLLPLLKNSP-VPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLD  157 (266)
Q Consensus        79 ~~l~~~~~~~l~~~~-~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~  157 (266)
                      +.+++.++|.|++++ ..++||++||..+.                    .+.+....|+++|+++..++++++.++.  
T Consensus       126 ~~~~~~~~~~l~~~~~~~~~iv~isS~~~~--------------------~~~~~~~~Y~asKaal~~l~~~la~e~~--  183 (256)
T TIGR01500       126 LCLTSSVLKAFKDSPGLNRTVVNISSLCAI--------------------QPFKGWALYCAGKAARDMLFQVLALEEK--  183 (256)
T ss_pred             HHHHHHHHHHHhhcCCCCCEEEEECCHHhC--------------------CCCCCchHHHHHHHHHHHHHHHHHHHhc--
Confidence            999999999998653 24799999998762                    3556678899999999999999999997  


Q ss_pred             CCCCeEEEEecCCcccCCccCcchh----HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceee
Q 024553          158 KSRHVSVIAADPGVVKTNIMREVPS----FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFF  224 (266)
Q Consensus       158 ~~~~i~v~~v~PG~v~T~~~~~~~~----~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~  224 (266)
                       +.+|+|++++||+|+|++.....+    ......+....+++++.+|+|+|+.+++++...+..+|.+++
T Consensus       184 -~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~~~~~~~~G~~~~  253 (256)
T TIGR01500       184 -NPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAKGKLVDPKVSAQKLLSLLEKDKFKSGAHVD  253 (256)
T ss_pred             -CCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCcCCcceee
Confidence             789999999999999998654211    011122233456678889999999999877555566777765

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.2e-25  Score=186.59  Aligned_cols=190  Identities=20%  Similarity=0.243  Sum_probs=151.1

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC---CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      .++.++.||+++.+++.++++++.+      .++++|+||||||+..   +..+.+.++|++++++|+.+++.+++.++|
T Consensus        55 ~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~  128 (254)
T PRK07478         55 GEAVALAGDVRDEAYAKALVALAVE------RFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIP  128 (254)
T ss_pred             CcEEEEEcCCCCHHHHHHHHHHHHH------hcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            4688999999999999999999998      6689999999999853   445678889999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++++ .++||++||..+..                   .+.+....|+.+|+++..++++++.++.   +.+|+|++|
T Consensus       129 ~l~~~~-~~~iv~~sS~~~~~-------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v  185 (254)
T PRK07478        129 AMLARG-GGSLIFTSTFVGHT-------------------AGFPGMAAYAASKAGLIGLTQVLAAEYG---AQGIRVNAL  185 (254)
T ss_pred             HHHhcC-CceEEEEechHhhc-------------------cCCCCcchhHHHHHHHHHHHHHHHHHHh---hcCEEEEEE
Confidence            998876 78999999987531                   2455677899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHH-HHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCc
Q 024553          168 DPGVVKTNIMREVPSFLSLMA-FTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  229 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~  229 (266)
                      +||+++|++.+.......... .....+++++.+|+++|+.+++++.. +...+|..+..++|.
T Consensus       186 ~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg~  249 (254)
T PRK07478        186 LPGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAALFLASDAASFVTGTALLVDGGV  249 (254)
T ss_pred             eeCcccCcccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCeEEeCCch
Confidence            999999998765322111111 11122456678999999999965432 234578777666554

>PRK06398 aldose dehydrogenase; Validated

Probab=99.94  E-value=1.5e-25  Score=186.50  Aligned_cols=189  Identities=20%  Similarity=0.269  Sum_probs=151.1

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      ++.++.||++++++++++++++.+      .++++|+||||||+.  .+..+.+.++|++++++|+.|++.+++.++|+|
T Consensus        45 ~~~~~~~D~~~~~~i~~~~~~~~~------~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  118 (258)
T PRK06398         45 DVDYFKVDVSNKEQVIKGIDYVIS------KYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYM  118 (258)
T ss_pred             ceEEEEccCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            578999999999999999999988      678999999999986  345677888999999999999999999999999


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      ++++ .++||++||..+.                    .+.+....|+.+|++++.++++++.++.   + +|+||+|+|
T Consensus       119 ~~~~-~g~iv~isS~~~~--------------------~~~~~~~~Y~~sKaal~~~~~~la~e~~---~-~i~vn~i~P  173 (258)
T PRK06398        119 LKQD-KGVIINIASVQSF--------------------AVTRNAAAYVTSKHAVLGLTRSIAVDYA---P-TIRCVAVCP  173 (258)
T ss_pred             HHcC-CeEEEEeCcchhc--------------------cCCCCCchhhhhHHHHHHHHHHHHHHhC---C-CCEEEEEec
Confidence            8766 7899999998763                    2456678899999999999999999996   4 499999999


Q ss_pred             CcccCCccCcchh------HHH----HHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCccc
Q 024553          170 GVVKTNIMREVPS------FLS----LMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  231 (266)
Q Consensus       170 G~v~T~~~~~~~~------~~~----~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~  231 (266)
                      |+++|++......      ...    ........+++++.+|+++|+.+++++... ...+|..+..++|...
T Consensus       174 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~s~~~~~~~G~~i~~dgg~~~  246 (258)
T PRK06398        174 GSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLASDLASFITGECVTVDGGLRA  246 (258)
T ss_pred             CCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCHHHHHHHHHHHcCcccCCCCCcEEEECCcccc
Confidence            9999998654210      000    111112235567789999999999654322 3457888877777543

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2.4e-25  Score=184.45  Aligned_cols=193  Identities=25%  Similarity=0.310  Sum_probs=147.2

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.+|+++.+++..+++++.+.+.+....+++|+||||||+..  +..+.+.+.|++++++|+.+++.+++.++|.
T Consensus        54 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~  133 (252)
T PRK12747         54 GSAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSR  133 (252)
T ss_pred             CceEEEecccCCHHHHHHHHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence            45788999999999999999988763321101138999999999753  3456778889999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |++   .++||++||..+.                    .+.+....|+.||+++..++++++.++.   +.+|+||+|+
T Consensus       134 ~~~---~g~iv~isS~~~~--------------------~~~~~~~~Y~~sKaa~~~~~~~la~e~~---~~girvn~v~  187 (252)
T PRK12747        134 LRD---NSRIINISSAATR--------------------ISLPDFIAYSMTKGAINTMTFTLAKQLG---ARGITVNAIL  187 (252)
T ss_pred             hhc---CCeEEEECCcccc--------------------cCCCCchhHHHHHHHHHHHHHHHHHHHh---HcCCEEEEEe
Confidence            976   4799999999863                    2455667899999999999999999997   7899999999


Q ss_pred             CCcccCCccCcchhHHHHHHH-HHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCc
Q 024553          169 PGVVKTNIMREVPSFLSLMAF-TVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  229 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~  229 (266)
                      ||+|+|++............. ....+++++.+|+++|+.+++++.. +...+|..+..++|.
T Consensus       188 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgg~  250 (252)
T PRK12747        188 PGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGGS  250 (252)
T ss_pred             cCCccCchhhhcccCHHHHHHHHhcCcccCCCCHHHHHHHHHHHcCccccCcCCcEEEecCCc
Confidence            999999986543211111111 1112456788999999999954322 124578877766653

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.5e-25  Score=189.08  Aligned_cols=192  Identities=19%  Similarity=0.219  Sum_probs=152.3

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.+++.++++++.+      .++++|++|||||+..  +..+.+.++|++++++|+.+++.+++.++|
T Consensus        63 ~~~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  136 (286)
T PRK07791         63 GGEAVANGDDIADWDGAANLVDAAVE------TFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAA  136 (286)
T ss_pred             CCceEEEeCCCCCHHHHHHHHHHHHH------hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHH
Confidence            34688999999999999999999988      6789999999999863  456778899999999999999999999999


Q ss_pred             HHhcCC-----CCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCe
Q 024553           88 LLKNSP-----VPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHV  162 (266)
Q Consensus        88 ~l~~~~-----~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i  162 (266)
                      +|++..     ..|+||++||..+.                    .+.++...|+++|+++..++++++.++.   +.+|
T Consensus       137 ~~~~~~~~~~~~~g~Iv~isS~~~~--------------------~~~~~~~~Y~asKaal~~l~~~la~el~---~~gI  193 (286)
T PRK07791        137 YWRAESKAGRAVDARIINTSSGAGL--------------------QGSVGQGNYSAAKAGIAALTLVAAAELG---RYGV  193 (286)
T ss_pred             HHHHhcccCCCCCcEEEEeCchhhC--------------------cCCCCchhhHHHHHHHHHHHHHHHHHHH---HhCe
Confidence            997542     13799999998863                    3556678899999999999999999997   7899


Q ss_pred             EEEEecCCcccCCccCcchhHHHHHHHHHHHHhh--cCCCHHHHHHHHHHHhcC-CCCcccceeecCCCccccCCcc
Q 024553          163 SVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG--LLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVNSSAL  236 (266)
Q Consensus       163 ~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~~~~~~  236 (266)
                      +||+|+|| +.|++.......     .....+.+  +..+|+++|+.+++++.. ....+|.++..++|.......|
T Consensus       194 rVn~v~Pg-~~T~~~~~~~~~-----~~~~~~~~~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~~~~~~~~  264 (286)
T PRK07791        194 TVNAIAPA-ARTRMTETVFAE-----MMAKPEEGEFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGGKISVAEGW  264 (286)
T ss_pred             EEEEECCC-CCCCcchhhHHH-----HHhcCcccccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCCceEEechh
Confidence            99999999 788875432111     00011111  245999999999965432 2356899998888877765554

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.94  E-value=3.2e-25  Score=184.50  Aligned_cols=189  Identities=14%  Similarity=0.065  Sum_probs=148.1

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC----CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA----TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      ++.++.||+++.++++++++++.+      .++++|+||||||...    +..+.+.++|.+.+++|+.+++.+++.++|
T Consensus        49 ~~~~~~~Dv~d~~~~~~~~~~~~~------~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~  122 (259)
T PRK08340         49 EVYAVKADLSDKDDLKNLVKEAWE------LLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQ  122 (259)
T ss_pred             CceEEEcCCCCHHHHHHHHHHHHH------hcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHH
Confidence            578999999999999999999988      6789999999999752    245667788999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|.+....|+||++||..+.                    .+.+....|+++|+++..++++++.++.   +++|+|++|
T Consensus       123 ~~~~~~~~g~iv~isS~~~~--------------------~~~~~~~~y~~sKaa~~~~~~~la~e~~---~~gI~v~~v  179 (259)
T PRK08340        123 AWLEKKMKGVLVYLSSVSVK--------------------EPMPPLVLADVTRAGLVQLAKGVSRTYG---GKGIRAYTV  179 (259)
T ss_pred             HHHhcCCCCEEEEEeCcccC--------------------CCCCCchHHHHHHHHHHHHHHHHHHHhC---CCCEEEEEe
Confidence            98643327899999998862                    3456677899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchh----------HHHH-HHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCc
Q 024553          168 DPGVVKTNIMREVPS----------FLSL-MAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  229 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~----------~~~~-~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~  229 (266)
                      +||+++|++.+....          .... .......+++++.+|+|+|+.+++++-. +...+|..+..++|.
T Consensus       180 ~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~fL~s~~~~~itG~~i~vdgg~  253 (259)
T PRK08340        180 LLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLIAFLLSENAEYMLGSTIVFDGAM  253 (259)
T ss_pred             ccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHHHHHHHHHHHcCcccccccCceEeecCCc
Confidence            999999998642110          0000 1111223567888999999999943321 125578877766664

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.93  E-value=3.2e-25  Score=172.62  Aligned_cols=182  Identities=25%  Similarity=0.350  Sum_probs=147.1

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCC---CcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS---SRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      ..+++.++.|+++.+++.++++++.+...    ..++|+||+|||+..+.   .+.+.+.|-+.+++|.+|++++++.++
T Consensus        53 d~rvHii~Ldvt~deS~~~~~~~V~~iVg----~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~l  128 (249)
T KOG1611|consen   53 DSRVHIIQLDVTCDESIDNFVQEVEKIVG----SDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFL  128 (249)
T ss_pred             CCceEEEEEecccHHHHHHHHHHHHhhcc----cCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHH
Confidence            46899999999999999999999998431    46899999999997543   334456699999999999999999999


Q ss_pred             HHHhcCC----------CCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCC
Q 024553           87 PLLKNSP----------VPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGL  156 (266)
Q Consensus        87 ~~l~~~~----------~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~  156 (266)
                      |++++..          ....||++||.++...                 .....++.+|.+||+|+..++|+++.++. 
T Consensus       129 PLLkkaas~~~gd~~s~~raaIinisS~~~s~~-----------------~~~~~~~~AYrmSKaAlN~f~ksls~dL~-  190 (249)
T KOG1611|consen  129 PLLKKAASKVSGDGLSVSRAAIINISSSAGSIG-----------------GFRPGGLSAYRMSKAALNMFAKSLSVDLK-  190 (249)
T ss_pred             HHHHHHhhcccCCcccccceeEEEeeccccccC-----------------CCCCcchhhhHhhHHHHHHHHHHhhhhhc-
Confidence            9998653          1348999999886321                 22344568999999999999999999998 


Q ss_pred             CCCCCeEEEEecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCcccc
Q 024553          157 DKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  232 (266)
Q Consensus       157 ~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~~  232 (266)
                        +.+|.|..+|||||+|+|.....                ..+||+.+..++..+..- +.-+|.||+ .++.+++
T Consensus       191 --~~~ilv~sihPGwV~TDMgg~~a----------------~ltveeSts~l~~~i~kL~~~hnG~ffn-~dlt~ip  248 (249)
T KOG1611|consen  191 --DDHILVVSIHPGWVQTDMGGKKA----------------ALTVEESTSKLLASINKLKNEHNGGFFN-RDGTPIP  248 (249)
T ss_pred             --CCcEEEEEecCCeEEcCCCCCCc----------------ccchhhhHHHHHHHHHhcCcccCcceEc-cCCCcCC
Confidence              89999999999999999987432                238999999998777644 456788887 3555543

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.93  E-value=4.4e-25  Score=183.96  Aligned_cols=191  Identities=18%  Similarity=0.155  Sum_probs=150.4

Q ss_pred             CCCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhh
Q 024553            8 NKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLL   85 (266)
Q Consensus         8 ~~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~   85 (266)
                      .+..++.++++|+++.+++.++++++.+      .++++|+||||||...  +..+.+.++|++++++|+.+++.+++.+
T Consensus        66 ~~~~~~~~~~~Dl~~~~~~~~~~~~~~~------~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~  139 (262)
T PRK07831         66 LGLGRVEAVVCDVTSEAQVDALIDAAVE------RLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAA  139 (262)
T ss_pred             cCCceEEEEEccCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence            3345788999999999999999999988      5689999999999753  4556778899999999999999999999


Q ss_pred             HHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEE
Q 024553           86 LPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVI  165 (266)
Q Consensus        86 ~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~  165 (266)
                      +|.|+.....++||+++|..+.                    .+.++...|+++|++++.++++++.++.   +++|+|+
T Consensus       140 ~~~~~~~~~~g~iv~~ss~~~~--------------------~~~~~~~~Y~~sKaal~~~~~~la~e~~---~~gI~v~  196 (262)
T PRK07831        140 LRYMRARGHGGVIVNNASVLGW--------------------RAQHGQAHYAAAKAGVMALTRCSALEAA---EYGVRIN  196 (262)
T ss_pred             HHHHHhcCCCcEEEEeCchhhc--------------------CCCCCCcchHHHHHHHHHHHHHHHHHhC---ccCeEEE
Confidence            9999875435899999998763                    2445667899999999999999999997   7899999


Q ss_pred             EecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCC
Q 024553          166 AADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGK  227 (266)
Q Consensus       166 ~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~  227 (266)
                      .|+||+++|++.................+++++.+|+++|+.+++++... ...+|..+..++
T Consensus       197 ~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~s~~~~~itG~~i~v~~  259 (262)
T PRK07831        197 AVAPSIAMHPFLAKVTSAELLDELAAREAFGRAAEPWEVANVIAFLASDYSSYLTGEVVSVSS  259 (262)
T ss_pred             EEeeCCccCcccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCcCCceEEeCC
Confidence            99999999998754322221111222335677889999999999543321 245677766544

>PRK06128 oxidoreductase; Provisional

Probab=99.93  E-value=2.7e-25  Score=188.84  Aligned_cols=189  Identities=20%  Similarity=0.192  Sum_probs=150.9

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC---CCCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||..   .+..+.+.++|++++++|+.|++.+++.++
T Consensus       105 ~~~~~~~~~Dl~~~~~v~~~~~~~~~------~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  178 (300)
T PRK06128        105 GRKAVALPGDLKDEAFCRQLVERAVK------ELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAI  178 (300)
T ss_pred             CCeEEEEecCCCCHHHHHHHHHHHHH------HhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            34688999999999999999999988      668999999999975   245577889999999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |+|++   +++||++||..+..                    +.+....|+++|++++.++++++.++.   +.+|+||+
T Consensus       179 ~~~~~---~~~iv~~sS~~~~~--------------------~~~~~~~Y~asK~a~~~~~~~la~el~---~~gI~v~~  232 (300)
T PRK06128        179 PHLPP---GASIINTGSIQSYQ--------------------PSPTLLDYASTKAAIVAFTKALAKQVA---EKGIRVNA  232 (300)
T ss_pred             HhcCc---CCEEEEECCccccC--------------------CCCCchhHHHHHHHHHHHHHHHHHHhh---hcCcEEEE
Confidence            99875   57999999988632                    445567899999999999999999997   78999999


Q ss_pred             ecCCcccCCccCcch-hHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCcc
Q 024553          167 ADPGVVKTNIMREVP-SFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  230 (266)
Q Consensus       167 v~PG~v~T~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~  230 (266)
                      |.||+++|++..... .......+....+++++..|+++|..+++++.. +...+|..+..++|..
T Consensus       233 v~PG~i~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~~~~G~~~~v~gg~~  298 (300)
T PRK06128        233 VAPGPVWTPLQPSGGQPPEKIPDFGSETPMKRPGQPVEMAPLYVLLASQESSYVTGEVFGVTGGLL  298 (300)
T ss_pred             EEECcCcCCCcccCCCCHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccCccCcEEeeCCCEe
Confidence            999999999865321 111111122234567788999999999954332 1244788888777753

>PRK07985 oxidoreductase; Provisional

Probab=99.93  E-value=3.4e-25  Score=187.61  Aligned_cols=188  Identities=16%  Similarity=0.166  Sum_probs=149.8

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC---CCCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      +.++.++.||+++.+++.++++++.+      .++++|++|||||..   .+..+.+.++|++++++|+.+++.+++.++
T Consensus        99 ~~~~~~~~~Dl~~~~~~~~~~~~~~~------~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  172 (294)
T PRK07985         99 GRKAVLLPGDLSDEKFARSLVHEAHK------ALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAI  172 (294)
T ss_pred             CCeEEEEEccCCCHHHHHHHHHHHHH------HhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            34688999999999999999999988      678999999999974   345677889999999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |+|++   .++||++||..+.                    .+.+...+|+++|+++..++++++.++.   +.+|+||+
T Consensus       173 ~~m~~---~g~iv~iSS~~~~--------------------~~~~~~~~Y~asKaal~~l~~~la~el~---~~gIrvn~  226 (294)
T PRK07985        173 PLLPK---GASIITTSSIQAY--------------------QPSPHLLDYAATKAAILNYSRGLAKQVA---EKGIRVNI  226 (294)
T ss_pred             Hhhhc---CCEEEEECCchhc--------------------cCCCCcchhHHHHHHHHHHHHHHHHHHh---HhCcEEEE
Confidence            99975   4799999998863                    2455667899999999999999999997   78999999


Q ss_pred             ecCCcccCCccCcch-hHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCc
Q 024553          167 ADPGVVKTNIMREVP-SFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  229 (266)
Q Consensus       167 v~PG~v~T~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~  229 (266)
                      |+||+|+|++..... +......+....+++++.+|+++|+.+++++.. +...+|..+..++|.
T Consensus       227 i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~~~fL~s~~~~~itG~~i~vdgG~  291 (294)
T PRK07985        227 VAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCGGE  291 (294)
T ss_pred             EECCcCccccccccCCCHHHHHHHhccCCCCCCCCHHHHHHHHHhhhChhcCCccccEEeeCCCe
Confidence            999999999853211 111111122233566788999999999954432 224568888777764

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.93  E-value=6e-25  Score=182.45  Aligned_cols=193  Identities=18%  Similarity=0.191  Sum_probs=152.5

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCC-CCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT-SSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      +.++.++.||+++.+++.++++.+.+      ..+++|++|||||...+ ..+.+.++|++.+++|+.+++.+++.++|+
T Consensus        59 ~~~~~~~~~D~~~~~~i~~~~~~~~~------~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  132 (255)
T PRK06113         59 GGQAFACRCDITSEQELSALADFALS------KLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPE  132 (255)
T ss_pred             CCcEEEEEccCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence            34688999999999999999999988      67899999999998642 235677889999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |.+.+ .++||++||..+.                    .+.++...|+++|++++.++++++.++.   ..+|+||+|+
T Consensus       133 ~~~~~-~~~iv~isS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~~~~---~~~i~v~~v~  188 (255)
T PRK06113        133 MEKNG-GGVILTITSMAAE--------------------NKNINMTSYASSKAAASHLVRNMAFDLG---EKNIRVNGIA  188 (255)
T ss_pred             HHhcC-CcEEEEEeccccc--------------------CCCCCcchhHHHHHHHHHHHHHHHHHhh---hhCeEEEEEe
Confidence            98665 6899999998762                    3455667899999999999999999997   7899999999


Q ss_pred             CCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCcccc
Q 024553          169 PGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~~  232 (266)
                      ||+++|++.................+++++.+|+++++++++++.. +...+|..+..++|...+
T Consensus       189 pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~G~~i~~~gg~~~~  253 (255)
T PRK06113        189 PGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQILTVSGGGVQE  253 (255)
T ss_pred             cccccccccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEECCCcccc
Confidence            9999999876532111111112223445678999999999965432 124578888878876543

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.93  E-value=3.8e-25  Score=183.61  Aligned_cols=191  Identities=27%  Similarity=0.323  Sum_probs=151.2

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      .+.++.||+++.+++.++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.+++.+++.++|.|
T Consensus        52 ~~~~~~~Dl~~~~~~~~~~~~~~~------~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~  125 (255)
T PRK06463         52 GVFTIKCDVGNRDQVKKSKEVVEK------EFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLL  125 (255)
T ss_pred             CCeEEEecCCCHHHHHHHHHHHHH------HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHH
Confidence            367899999999999999999988      6789999999999863  45567888999999999999999999999999


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      ++++ .++||++||..+..                   ...+....|+++|+++..++++++.++.   +.+|+|+.++|
T Consensus       126 ~~~~-~g~iv~isS~~~~~-------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~~i~v~~i~P  182 (255)
T PRK06463        126 KLSK-NGAIVNIASNAGIG-------------------TAAEGTTFYAITKAGIIILTRRLAFELG---KYGIRVNAVAP  182 (255)
T ss_pred             HhcC-CcEEEEEcCHHhCC-------------------CCCCCccHhHHHHHHHHHHHHHHHHHhh---hcCeEEEEEee
Confidence            8766 78999999987631                   1234456799999999999999999997   78999999999


Q ss_pred             CcccCCccCcchhHH---HH-HHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCccc
Q 024553          170 GVVKTNIMREVPSFL---SL-MAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  231 (266)
Q Consensus       170 G~v~T~~~~~~~~~~---~~-~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~  231 (266)
                      |+++|++........   .. .......+++++.+|+++|+.+++++... ...+|..+..++|+..
T Consensus       183 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg~~~  249 (255)
T PRK06463        183 GWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFLASDDARYITGQVIVADGGRID  249 (255)
T ss_pred             CCCCCchhhcccCccchHHHHHHHHhCCCcCCCcCHHHHHHHHHHHcChhhcCCCCCEEEECCCeee
Confidence            999999864321110   11 11122234567789999999999654322 2467998887777654

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.93  E-value=4.7e-26  Score=177.24  Aligned_cols=193  Identities=21%  Similarity=0.276  Sum_probs=156.1

Q ss_pred             hhhcccCCCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHH
Q 024553            2 ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL   81 (266)
Q Consensus         2 ~~i~~~~~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l   81 (266)
                      ++|++.+|..++.|++||+++..+++++++++..      .++.+|++||+||+.      +..+|+.++++|+.|.+.-
T Consensus        46 akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~------~fg~iDIlINgAGi~------~dkd~e~Ti~vNLtgvin~  113 (261)
T KOG4169|consen   46 AKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILA------TFGTIDILINGAGIL------DDKDWERTINVNLTGVING  113 (261)
T ss_pred             HHHhccCCCceEEEEEeccccHHHHHHHHHHHHH------HhCceEEEEcccccc------cchhHHHhhccchhhhhhh
Confidence            5678889999999999999999999999999999      679999999999996      3566999999999999999


Q ss_pred             HHhhHHHHhcCC--CCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCC
Q 024553           82 TKLLLPLLKNSP--VPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKS  159 (266)
Q Consensus        82 ~~~~~~~l~~~~--~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~  159 (266)
                      +...+|+|.++.  .+|-||++||..|                    -.+.+-...|++||+++..|+|++|..... .+
T Consensus       114 T~~alpyMdk~~gG~GGiIvNmsSv~G--------------------L~P~p~~pVY~AsKaGVvgFTRSla~~ayy-~~  172 (261)
T KOG4169|consen  114 TQLALPYMDKKQGGKGGIIVNMSSVAG--------------------LDPMPVFPVYAASKAGVVGFTRSLADLAYY-QR  172 (261)
T ss_pred             hhhhhhhhhhhcCCCCcEEEEeccccc--------------------cCccccchhhhhcccceeeeehhhhhhhhH-hh
Confidence            999999997653  5789999999997                    347777899999999999999999876321 16


Q ss_pred             CCeEEEEecCCcccCCccCcchhHHHHHHH--HHHHHh--hcCCCHHHHHHHHHHHhcCCCCcccceeecCCCc
Q 024553          160 RHVSVIAADPGVVKTNIMREVPSFLSLMAF--TVLKLL--GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGR  229 (266)
Q Consensus       160 ~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~--~~~~~~--~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~  229 (266)
                      .||++++||||+++|++..++.....+...  .....+  ..-.+|..++..++.++..  ..+|..|..+.|+
T Consensus       173 sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~~q~~~~~a~~~v~aiE~--~~NGaiw~v~~g~  244 (261)
T KOG4169|consen  173 SGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERAPKQSPACCAINIVNAIEY--PKNGAIWKVDSGS  244 (261)
T ss_pred             cCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHcccCCHHHHHHHHHHHHhh--ccCCcEEEEecCc
Confidence            799999999999999998776331111110  000111  1235899999999988766  5677777767766

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.93  E-value=6e-25  Score=183.09  Aligned_cols=190  Identities=17%  Similarity=0.187  Sum_probs=150.2

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC-CCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA-TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~-~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      .++.++.||+++.+++.++++++.+      .++++|++|||||... ...+.+.++|++.+++|+.+++.+++.++|.|
T Consensus        52 ~~~~~~~~Dl~~~~~~~~~~~~~~~------~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~  125 (261)
T PRK08265         52 ERARFIATDITDDAAIERAVATVVA------RFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHL  125 (261)
T ss_pred             CeeEEEEecCCCHHHHHHHHHHHHH------HhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHH
Confidence            4688999999999999999999988      6689999999999863 22356778999999999999999999999999


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      + ++ .++||++||..+.                    .+.+....|+.+|+++..++++++.++.   +.+|++|+|+|
T Consensus       126 ~-~~-~g~ii~isS~~~~--------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~vn~v~P  180 (261)
T PRK08265        126 A-RG-GGAIVNFTSISAK--------------------FAQTGRWLYPASKAAIRQLTRSMAMDLA---PDGIRVNSVSP  180 (261)
T ss_pred             h-cC-CcEEEEECchhhc--------------------cCCCCCchhHHHHHHHHHHHHHHHHHhc---ccCEEEEEEcc
Confidence            7 44 6899999998763                    2445567899999999999999999997   78999999999


Q ss_pred             CcccCCccCcchhHHH--HHHH-HHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCccc
Q 024553          170 GVVKTNIMREVPSFLS--LMAF-TVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  231 (266)
Q Consensus       170 G~v~T~~~~~~~~~~~--~~~~-~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~  231 (266)
                      |+++|++.........  .... ....+++++.+|+++|+.+++++.. +...+|..+..++|...
T Consensus       181 G~~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~~~tG~~i~vdgg~~~  246 (261)
T PRK08265        181 GWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFLCSDAASFVTGADYAVDGGYSA  246 (261)
T ss_pred             CCccChhhhhhcccchhHHHHhhcccCCCCCccCHHHHHHHHHHHcCccccCccCcEEEECCCeec
Confidence            9999998654321111  1111 1123566788999999999965432 13457887777777543

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.93  E-value=1e-24  Score=181.60  Aligned_cols=194  Identities=20%  Similarity=0.278  Sum_probs=155.1

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.+|+++.+++.++++++.+      ..+++|++|||||...  +..+.+.++|++++++|+.+++.+++.+++
T Consensus        56 ~~~~~~~~~Dl~~~~~i~~~~~~~~~------~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~  129 (261)
T PRK08936         56 GGEAIAVKGDVTVESDVVNLIQTAVK------EFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIK  129 (261)
T ss_pred             CCeEEEEEecCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            35688999999999999999999988      6689999999999863  345667889999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++.+..++||++||..+                    ..+.+....|+.+|+++..++++++.++.   +.+|++++|
T Consensus       130 ~~~~~~~~g~iv~~sS~~~--------------------~~~~~~~~~Y~~sKaa~~~~~~~la~e~~---~~gi~v~~v  186 (261)
T PRK08936        130 YFVEHDIKGNIINMSSVHE--------------------QIPWPLFVHYAASKGGVKLMTETLAMEYA---PKGIRVNNI  186 (261)
T ss_pred             HHHhcCCCcEEEEEccccc--------------------cCCCCCCcccHHHHHHHHHHHHHHHHHHh---hcCeEEEEE
Confidence            9987654689999999765                    23566678899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcc-hhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCcccc
Q 024553          168 DPGVVKTNIMREV-PSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       168 ~PG~v~T~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~~  232 (266)
                      +||+++|++.... .............+++++.+|+++++.+++++.. +...+|..+..++|..+.
T Consensus       187 ~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~d~g~~~~  253 (261)
T PRK08936        187 GPGAINTPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVAAWLASSEASYVTGITLFADGGMTLY  253 (261)
T ss_pred             EECcCCCCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCccCcEEEECCCcccC
Confidence            9999999986532 1111111112223556788999999999965442 346689888877776543

>PRK12743 oxidoreductase; Provisional

Probab=99.93  E-value=9.3e-25  Score=181.42  Aligned_cols=193  Identities=21%  Similarity=0.181  Sum_probs=155.4

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|++|||||...  +..+.+.++|++++++|+.+++.+++.+++
T Consensus        51 ~~~~~~~~~Dl~~~~~~~~~~~~~~~------~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  124 (256)
T PRK12743         51 GVRAEIRQLDLSDLPEGAQALDKLIQ------RLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAAR  124 (256)
T ss_pred             CCceEEEEccCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            45789999999999999999999998      6689999999999864  345667889999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|.+++..++||++||..+                    ..+.++...|+.+|+++..++++++.++.   ..+|++++|
T Consensus       125 ~l~~~~~~g~ii~isS~~~--------------------~~~~~~~~~Y~~sK~a~~~l~~~la~~~~---~~~i~v~~v  181 (256)
T PRK12743        125 HMVKQGQGGRIINITSVHE--------------------HTPLPGASAYTAAKHALGGLTKAMALELV---EHGILVNAV  181 (256)
T ss_pred             HHHhcCCCeEEEEEeeccc--------------------cCCCCCcchhHHHHHHHHHHHHHHHHHhh---hhCeEEEEE
Confidence            9976543689999999875                    33556678899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCcccc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  232 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~~  232 (266)
                      +||+++|++........ ........+++++.+|+++++.+++++... ...+|.++..++|..+.
T Consensus       182 ~Pg~~~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  246 (256)
T PRK12743        182 APGAIATPMNGMDDSDV-KPDSRPGIPLGRPGDTHEIASLVAWLCSEGASYTTGQSLIVDGGFMLA  246 (256)
T ss_pred             EeCCccCccccccChHH-HHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCcCCcEEEECCCcccc
Confidence            99999999875432221 111222234566779999999999655322 34679998888886543

>PRK09242 tropinone reductase; Provisional

Probab=99.93  E-value=1.6e-24  Score=180.05  Aligned_cols=194  Identities=20%  Similarity=0.209  Sum_probs=154.4

Q ss_pred             ccCCCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHH
Q 024553            6 SRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTK   83 (266)
Q Consensus         6 ~~~~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~   83 (266)
                      ..+++.++.++.||+++.+++.++++++.+      .++++|++|||||..  .+..+.+.++|++.+++|+.+++.+++
T Consensus        55 ~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~------~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  128 (257)
T PRK09242         55 EEFPEREVHGLAADVSDDEDRRAILDWVED------HWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSR  128 (257)
T ss_pred             hhCCCCeEEEEECCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHH
Confidence            334566899999999999999999999988      678999999999985  345567889999999999999999999


Q ss_pred             hhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeE
Q 024553           84 LLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVS  163 (266)
Q Consensus        84 ~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~  163 (266)
                      .++|+|++++ .++||++||..+.                    .+.+....|+.+|.++..++++++.++.   +.+|+
T Consensus       129 ~~~~~~~~~~-~~~ii~~sS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~~i~  184 (257)
T PRK09242        129 YAHPLLKQHA-SSAIVNIGSVSGL--------------------THVRSGAPYGMTKAALLQMTRNLAVEWA---EDGIR  184 (257)
T ss_pred             HHHHHHHhcC-CceEEEECccccC--------------------CCCCCCcchHHHHHHHHHHHHHHHHHHH---HhCeE
Confidence            9999998766 6899999998763                    2455667899999999999999999997   78999


Q ss_pred             EEEecCCcccCCccCcchhHHH-HHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          164 VIAADPGVVKTNIMREVPSFLS-LMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       164 v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      +++++||+++|++......... ........+++++.+|++++..+++++... ...+|..+..++|.
T Consensus       185 v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~gg~  252 (257)
T PRK09242        185 VNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAFLCMPAASYITGQCIAVDGGF  252 (257)
T ss_pred             EEEEEECCCCCcccccccCChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccccccCCEEEECCCe
Confidence            9999999999998765322111 111122234566779999999999655322 23467777666554

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.93  E-value=2.2e-24  Score=180.08  Aligned_cols=193  Identities=15%  Similarity=0.225  Sum_probs=154.6

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.+++||+++.++++++++++.+      ..+++|+||||||...  +..+.+.+++++++++|+.+++.+++.++|
T Consensus        58 ~~~~~~~~~Dl~~~~~~~~~~~~~~~------~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  131 (265)
T PRK07097         58 GIEAHGYVCDVTDEDGVQAMVSQIEK------EVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIP  131 (265)
T ss_pred             CCceEEEEcCCCCHHHHHHHHHHHHH------hCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHH
Confidence            34789999999999999999999988      6689999999999863  445677889999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++.+ .++||++||..+.                    .+.+....|+.+|+++..++++++.++.   +.+|+|++|
T Consensus       132 ~~~~~~-~g~iv~isS~~~~--------------------~~~~~~~~Y~~sKaal~~l~~~la~e~~---~~gi~v~~v  187 (265)
T PRK07097        132 SMIKKG-HGKIINICSMMSE--------------------LGRETVSAYAAAKGGLKMLTKNIASEYG---EANIQCNGI  187 (265)
T ss_pred             HHHhcC-CcEEEEEcCcccc--------------------CCCCCCccHHHHHHHHHHHHHHHHHHhh---hcCceEEEE
Confidence            998766 7899999998752                    2445667899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchh------HHHHH-HHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCcccc
Q 024553          168 DPGVVKTNIMREVPS------FLSLM-AFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~------~~~~~-~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~~  232 (266)
                      .||+++|++......      ..... ......+.+++.+|+++|..+++++.. ++..+|..+..++|...+
T Consensus       188 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~~~~  260 (265)
T PRK07097        188 GPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAVFLASDASNFVNGHILYVDGGILAY  260 (265)
T ss_pred             EeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCHHHHHHHHHHHhCcccCCCCCCEEEECCCceec
Confidence            999999997654321      00111 111122355677999999999976654 346688887777765443

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.93  E-value=1.5e-24  Score=182.31  Aligned_cols=192  Identities=18%  Similarity=0.186  Sum_probs=152.0

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCC-----------------CCcCCCcccchhhh
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT-----------------SSRLTPEGYDQMMS   72 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~-----------------~~~~~~~~~~~~~~   72 (266)
                      +.++.++.||+++.+++..+++++.+      .++++|++|||||...+                 ..+.+.++|++.++
T Consensus        58 ~~~~~~~~~Dl~~~~~v~~~~~~~~~------~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (278)
T PRK08277         58 GGEALAVKADVLDKESLEQARQQILE------DFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFD  131 (278)
T ss_pred             CCeEEEEECCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHh
Confidence            34688999999999999999999988      67899999999996521                 33566788999999


Q ss_pred             hhhhhHHHHHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHH
Q 024553           73 TNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHR  152 (266)
Q Consensus        73 ~n~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~  152 (266)
                      +|+.+++.+++.++|.|++.+ .++||++||..+.                    .+.+....|+.+|+++..++++++.
T Consensus       132 ~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~~--------------------~~~~~~~~Y~~sK~a~~~l~~~la~  190 (278)
T PRK08277        132 LNLLGTLLPTQVFAKDMVGRK-GGNIINISSMNAF--------------------TPLTKVPAYSAAKAAISNFTQWLAV  190 (278)
T ss_pred             hhhHHHHHHHHHHHHHHHhcC-CcEEEEEccchhc--------------------CCCCCCchhHHHHHHHHHHHHHHHH
Confidence            999999999999999998776 7899999998863                    2455667899999999999999999


Q ss_pred             hhCCCCCCCeEEEEecCCcccCCccCcchhH------HHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC--CCCcccceee
Q 024553          153 NLGLDKSRHVSVIAADPGVVKTNIMREVPSF------LSLMAFTVLKLLGLLQSPEKGINSVLDAALA--PPETSGVYFF  224 (266)
Q Consensus       153 ~~~~~~~~~i~v~~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~--~~~~~G~~~~  224 (266)
                      ++.   ..+|++|+|+||++.|++.+.....      ..........+++++.+|+|+|+++++++..  +...+|..+.
T Consensus       191 e~~---~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~  267 (278)
T PRK08277        191 HFA---KVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMGRFGKPEELLGTLLWLADEKASSFVTGVVLP  267 (278)
T ss_pred             HhC---ccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCCccCCCCHHHHHHHHHHHcCccccCCcCCCEEE
Confidence            997   7899999999999999975432110      1111111223567888999999999954332  2245788888


Q ss_pred             cCCCccc
Q 024553          225 GGKGRTV  231 (266)
Q Consensus       225 ~~~g~~~  231 (266)
                      .++|...
T Consensus       268 vdgG~~~  274 (278)
T PRK08277        268 VDGGFSA  274 (278)
T ss_pred             ECCCeec
Confidence            7777543

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.93  E-value=1.8e-24  Score=179.15  Aligned_cols=188  Identities=19%  Similarity=0.187  Sum_probs=147.4

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCC-cceeeEcCCCC--------CCCCcCCCcccchhhhhhhhhHHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSS-IQLLINNAGIL--------ATSSRLTPEGYDQMMSTNYIGAFFL   81 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~-ld~lv~nAG~~--------~~~~~~~~~~~~~~~~~n~~~~~~l   81 (266)
                      .++.++.||+++.+++.++++++.+      ..+. +|++|||||..        .+..+.+.++|++++++|+.+++.+
T Consensus        52 ~~~~~~~~D~~~~~~~~~~~~~~~~------~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l  125 (253)
T PRK08642         52 DRAIALQADVTDREQVQAMFATATE------HFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNT  125 (253)
T ss_pred             CceEEEEcCCCCHHHHHHHHHHHHH------HhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHH
Confidence            4688999999999999999999987      4566 99999999864        1345667788999999999999999


Q ss_pred             HHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCC
Q 024553           82 TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRH  161 (266)
Q Consensus        82 ~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~  161 (266)
                      ++.+++.|.+.. .++||+++|..+.                    .+..+...|+.+|++++.+++++++++.   ..+
T Consensus       126 ~~~~~~~~~~~~-~g~iv~iss~~~~--------------------~~~~~~~~Y~~sK~a~~~l~~~la~~~~---~~~  181 (253)
T PRK08642        126 IQAALPGMREQG-FGRIINIGTNLFQ--------------------NPVVPYHDYTTAKAALLGLTRNLAAELG---PYG  181 (253)
T ss_pred             HHHHHHHHHhcC-CeEEEEECCcccc--------------------CCCCCccchHHHHHHHHHHHHHHHHHhC---ccC
Confidence            999999998765 6899999997642                    2344556899999999999999999997   789


Q ss_pred             eEEEEecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCC
Q 024553          162 VSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKG  228 (266)
Q Consensus       162 i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g  228 (266)
                      |+||+|+||+++|+......+...........+++++.+|+++|+.+++++.. +...+|..+..++|
T Consensus       182 i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~vdgg  249 (253)
T PRK08642        182 ITVNMVSGGLLRTTDASAATPDEVFDLIAATTPLRKVTTPQEFADAVLFFASPWARAVTGQNLVVDGG  249 (253)
T ss_pred             eEEEEEeecccCCchhhccCCHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCchhcCccCCEEEeCCC
Confidence            99999999999998654322211111122223456788999999999965543 23567887776665

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.93  E-value=1.4e-24  Score=180.60  Aligned_cols=190  Identities=18%  Similarity=0.197  Sum_probs=150.7

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.+++.++++++.+      .++++|++|||||...  +..+.+.++|++++++|+.+++.+++.++|
T Consensus        62 ~~~~~~~~~D~~~~~~i~~~~~~~~~------~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  135 (258)
T PRK06935         62 GRKVTFVQVDLTKPESAEKVVKEALE------EFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAK  135 (258)
T ss_pred             CCceEEEEcCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            34688999999999999999999998      6789999999999863  445667889999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++++ .++||++||..+.                    .+.+....|+++|++++.+++++++++.   +.+|+||.|
T Consensus       136 ~~~~~~-~g~iv~isS~~~~--------------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~i  191 (258)
T PRK06935        136 VMAKQG-SGKIINIASMLSF--------------------QGGKFVPAYTASKHGVAGLTKAFANELA---AYNIQVNAI  191 (258)
T ss_pred             HHHhcC-CeEEEEECCHHhc--------------------cCCCCchhhHHHHHHHHHHHHHHHHHhh---hhCeEEEEE
Confidence            998876 6899999998763                    2445567899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHH-HHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCc
Q 024553          168 DPGVVKTNIMREVPSFL-SLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  229 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~  229 (266)
                      +||+++|++........ .........+.+++.+|+++|..+++++.. +...+|..+..++|.
T Consensus       192 ~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~  255 (258)
T PRK06935        192 APGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFLASRASDYVNGHILAVDGGW  255 (258)
T ss_pred             EeccccccchhhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCCe
Confidence            99999999865432111 111111123456788999999999954331 124578877766663

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.4e-24  Score=180.09  Aligned_cols=190  Identities=20%  Similarity=0.183  Sum_probs=152.0

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +..+.++.+|+++.+++.++++++.+      .++++|++|||||...  +..+.+.+++++++++|+.+++.+++.+.+
T Consensus        60 ~~~~~~~~~Dl~~~~~~~~~~~~~~~------~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  133 (255)
T PRK06841         60 GGNAKGLVCDVSDSQSVEAAVAAVIS------AFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGR  133 (255)
T ss_pred             CCceEEEEecCCCHHHHHHHHHHHHH------HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHH
Confidence            34577999999999999999999988      5678999999999863  345667888999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++++ .++||++||..+.                    .+.+....|+.+|+++..++++++.++.   +.+|+++.|
T Consensus       134 ~~~~~~-~~~iv~~sS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v  189 (255)
T PRK06841        134 HMIAAG-GGKIVNLASQAGV--------------------VALERHVAYCASKAGVVGMTKVLALEWG---PYGITVNAI  189 (255)
T ss_pred             HHHhcC-CceEEEEcchhhc--------------------cCCCCCchHHHHHHHHHHHHHHHHHHHH---hhCeEEEEE
Confidence            998776 7899999998762                    2455667899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  229 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~  229 (266)
                      +||+++|++.................+.+++.+|+++|+.+++++.. +...+|..+..++|.
T Consensus       190 ~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~~dgg~  252 (255)
T PRK06841        190 SPTVVLTELGKKAWAGEKGERAKKLIPAGRFAYPEEIAAAALFLASDAAAMITGENLVIDGGY  252 (255)
T ss_pred             EeCcCcCcccccccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEECCCc
Confidence            99999999865432211111112223456778999999999965533 234578888777764

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.6e-24  Score=179.66  Aligned_cols=190  Identities=19%  Similarity=0.202  Sum_probs=153.4

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC---CCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      +.++.++.+|+++.+++..+++++.+      .++++|++|||||...   +..+.+.+++++++++|+.+++.+++.++
T Consensus        55 ~~~~~~~~~D~~~~~~i~~~~~~~~~------~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  128 (253)
T PRK06172         55 GGEALFVACDVTRDAEVKALVEQTIA------AYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQI  128 (253)
T ss_pred             CCceEEEEcCCCCHHHHHHHHHHHHH------HhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            34689999999999999999999988      5689999999999853   34567888999999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |.|.+++ .++||++||..+.                    .+.+....|+.+|+++..++++++.++.   +.+|+|++
T Consensus       129 ~~~~~~~-~~~ii~~sS~~~~--------------------~~~~~~~~Y~~sKaa~~~~~~~la~e~~---~~~i~v~~  184 (253)
T PRK06172        129 PLMLAQG-GGAIVNTASVAGL--------------------GAAPKMSIYAASKHAVIGLTKSAAIEYA---KKGIRVNA  184 (253)
T ss_pred             HHHHhcC-CcEEEEECchhhc--------------------cCCCCCchhHHHHHHHHHHHHHHHHHhc---ccCeEEEE
Confidence            9998766 6899999998763                    2456677899999999999999999997   78999999


Q ss_pred             ecCCcccCCccCcchh--HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCc
Q 024553          167 ADPGVVKTNIMREVPS--FLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  229 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~--~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~  229 (266)
                      |+||+++|++......  ...........+++++.+|+++++.+++++.. ....+|.++..++|.
T Consensus       185 i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ia~~~~~l~~~~~~~~~G~~i~~dgg~  250 (253)
T PRK06172        185 VCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYLCSDGASFTTGHALMVDGGA  250 (253)
T ss_pred             EEeCCccChhhhhhcccChHHHHHHhccCCCCCccCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence            9999999998765422  11111122233456778999999999965443 235689888777764

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.93  E-value=1.9e-24  Score=179.36  Aligned_cols=189  Identities=16%  Similarity=0.220  Sum_probs=151.5

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.+|+++.+++.++++++.+      .++++|++|||||...  +..+.+.++|++++++|+.+++.+++.+++.
T Consensus        58 ~~~~~~~~Dl~~~~~~~~~~~~~~~------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  131 (254)
T PRK08085         58 IKAHAAPFNVTHKQEVEAAIEHIEK------DIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARY  131 (254)
T ss_pred             CeEEEEecCCCCHHHHHHHHHHHHH------hcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            4688999999999999999999988      6789999999999763  4556788899999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      +++++ .++||++||..+.                    .+.+....|+.+|++++.++++++.++.   +.+|++|+|+
T Consensus       132 ~~~~~-~~~iv~isS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~  187 (254)
T PRK08085        132 MVKRQ-AGKIINICSMQSE--------------------LGRDTITPYAASKGAVKMLTRGMCVELA---RHNIQVNGIA  187 (254)
T ss_pred             HHHcC-CcEEEEEccchhc--------------------cCCCCCcchHHHHHHHHHHHHHHHHHHH---hhCeEEEEEE
Confidence            98765 6899999998752                    3455667899999999999999999997   7899999999


Q ss_pred             CCcccCCccCcchhHHHH-HHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCc
Q 024553          169 PGVVKTNIMREVPSFLSL-MAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  229 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~  229 (266)
                      ||+++|++.......... .......+++++.+|+|+|+.+++++.. +...+|..+..++|.
T Consensus       188 pG~~~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgg~  250 (254)
T PRK08085        188 PGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKASDFVNGHLLFVDGGM  250 (254)
T ss_pred             eCCCCCcchhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCe
Confidence            999999987543211111 1111223566788999999999854432 235578877766664

>PRK08643 acetoin reductase; Validated

Probab=99.92  E-value=2.2e-24  Score=179.11  Aligned_cols=190  Identities=23%  Similarity=0.263  Sum_probs=150.6

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.+++||++++++++++++++.+      +++++|++|||||+..  +..+.+.+++++++++|+.+++.+++.+++.
T Consensus        51 ~~~~~~~~Dl~~~~~~~~~~~~~~~------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  124 (256)
T PRK08643         51 GKAIAVKADVSDRDQVFAAVRQVVD------TFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEA  124 (256)
T ss_pred             CeEEEEECCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            4688999999999999999999988      6689999999999863  4556678899999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |++.+..++||++||..+.                    .+.++...|+.+|++++.+++.++.++.   +.||+|++|+
T Consensus       125 ~~~~~~~~~iv~~sS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~i~  181 (256)
T PRK08643        125 FKKLGHGGKIINATSQAGV--------------------VGNPELAVYSSTKFAVRGLTQTAARDLA---SEGITVNAYA  181 (256)
T ss_pred             HHhcCCCCEEEEECccccc--------------------cCCCCCchhHHHHHHHHHHHHHHHHHhc---ccCcEEEEEe
Confidence            9876535899999998763                    2445567899999999999999999997   7899999999


Q ss_pred             CCcccCCccCcchhH--------HH--HHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCc
Q 024553          169 PGVVKTNIMREVPSF--------LS--LMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  229 (266)
Q Consensus       169 PG~v~T~~~~~~~~~--------~~--~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~  229 (266)
                      ||+++|++.......        ..  ...+....+++++.+|+++|..+++++.. ....+|..+..++|.
T Consensus       182 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~L~~~~~~~~~G~~i~vdgg~  253 (256)
T PRK08643        182 PGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSFLAGPDSDYITGQTIIVDGGM  253 (256)
T ss_pred             eCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEeCCCe
Confidence            999999987543211        00  11111123456778999999999954432 235678888766653

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.92  E-value=1.7e-24  Score=179.85  Aligned_cols=191  Identities=28%  Similarity=0.330  Sum_probs=149.1

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCC-CCCcceeeEcCCCCC---CCCcCCCcccchhhhhhhhh-HHHHHHh
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDM-HSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIG-AFFLTKL   84 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~-~~~ld~lv~nAG~~~---~~~~~~~~~~~~~~~~n~~~-~~~l~~~   84 (266)
                      +.++..+.||+++.+++++++++..+      + ++++|+||||||...   +..+.+.+.|+.++++|+.| .+.+.+.
T Consensus        59 ~~~~~~~~~Dv~~~~~~~~l~~~~~~------~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~  132 (270)
T KOG0725|consen   59 GGKVLAIVCDVSKEVDVEKLVEFAVE------KFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQA  132 (270)
T ss_pred             CCeeEEEECcCCCHHHHHHHHHHHHH------HhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHH
Confidence            45799999999999999999999988      5 689999999999874   46788999999999999995 6667777


Q ss_pred             hHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEE
Q 024553           85 LLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSV  164 (266)
Q Consensus        85 ~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v  164 (266)
                      +.++++++. ++.|+++||..+..                   .......+|+++|+++.+|+|++|.++.   +.+|||
T Consensus       133 a~~~~~~~~-gg~I~~~ss~~~~~-------------------~~~~~~~~Y~~sK~al~~ltr~lA~El~---~~gIRv  189 (270)
T KOG0725|consen  133 ARPMLKKSK-GGSIVNISSVAGVG-------------------PGPGSGVAYGVSKAALLQLTRSLAKELA---KHGIRV  189 (270)
T ss_pred             HHHHHHhcC-CceEEEEecccccc-------------------CCCCCcccchhHHHHHHHHHHHHHHHHh---hcCcEE
Confidence            777777766 88999999988632                   1122227899999999999999999998   899999


Q ss_pred             EEecCCcccCCccCc-chhH--HHHHH---HHHHHHhhcCCCHHHHHHHHHHHhcCCC---CcccceeecCCCccc
Q 024553          165 IAADPGVVKTNIMRE-VPSF--LSLMA---FTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTV  231 (266)
Q Consensus       165 ~~v~PG~v~T~~~~~-~~~~--~~~~~---~~~~~~~~~~~~p~~~a~~~~~~~~~~~---~~~G~~~~~~~g~~~  231 (266)
                      |+|+||.|.|++... ....  .....   .....|++++..|++++..+.  |+..+   ..+|.-+..++|..+
T Consensus       190 N~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~~eva~~~~--fla~~~asyitG~~i~vdgG~~~  263 (270)
T KOG0725|consen  190 NSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRVGTPEEVAEAAA--FLASDDASYITGQTIIVDGGFTV  263 (270)
T ss_pred             EEeecCcEeCCccccccccchhhHHhhhhccccccccCCccCHHHHHHhHH--hhcCcccccccCCEEEEeCCEEe
Confidence            999999999998221 1111  11111   122346889999999999999  55554   345666666666554

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.92  E-value=2.4e-24  Score=177.99  Aligned_cols=190  Identities=21%  Similarity=0.222  Sum_probs=149.3

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.+|+++.+++..+++++.+      ..+++|++|||||...  +..+.+.++|++++++|+.+++.+++.+++.
T Consensus        52 ~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  125 (248)
T TIGR01832        52 RRFLSLTADLSDIEAIKALVDSAVE------EFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKH  125 (248)
T ss_pred             CceEEEECCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence            4689999999999999999999988      5688999999999864  3456677889999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |++++..++||++||..+..                    +.+....|+.+|+++..++++++.++.   +++|++++|+
T Consensus       126 ~~~~~~~g~iv~~sS~~~~~--------------------~~~~~~~Y~~sKaa~~~~~~~la~e~~---~~gi~v~~v~  182 (248)
T TIGR01832       126 FLKQGRGGKIINIASMLSFQ--------------------GGIRVPSYTASKHGVAGLTKLLANEWA---AKGINVNAIA  182 (248)
T ss_pred             HHhcCCCeEEEEEecHHhcc--------------------CCCCCchhHHHHHHHHHHHHHHHHHhC---ccCcEEEEEE
Confidence            97654357999999987632                    334456799999999999999999997   7899999999


Q ss_pred             CCcccCCccCcchhH-HHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCc
Q 024553          169 PGVVKTNIMREVPSF-LSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  229 (266)
Q Consensus       169 PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~  229 (266)
                      ||++.|++....... ..........+.+++.+|+++|+++++++-. +...+|.++..++|.
T Consensus       183 pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~  245 (248)
T TIGR01832       183 PGYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLASSASDYVNGYTLAVDGGW  245 (248)
T ss_pred             ECcCcCcchhccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCCcEEEeCCCE
Confidence            999999986543211 1111111123456778999999999965432 234578888777664

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.92  E-value=3.3e-24  Score=179.93  Aligned_cols=203  Identities=15%  Similarity=0.128  Sum_probs=143.3

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      +.++.++.||+++.+++.++++++ +      .++++|+||||||+..     ..++|++++++|+.|++++++.++|.|
T Consensus        48 ~~~~~~~~~Dv~d~~~i~~~~~~~-~------~~g~id~li~nAG~~~-----~~~~~~~~~~vN~~g~~~l~~~~~~~m  115 (275)
T PRK06940         48 GFDVSTQEVDVSSRESVKALAATA-Q------TLGPVTGLVHTAGVSP-----SQASPEAILKVDLYGTALVLEEFGKVI  115 (275)
T ss_pred             CCeEEEEEeecCCHHHHHHHHHHH-H------hcCCCCEEEECCCcCC-----chhhHHHHHHHhhHHHHHHHHHHHHHH
Confidence            347889999999999999999988 4      3578999999999853     235699999999999999999999999


Q ss_pred             hcCCCCCeEEEEcCCccccccc---------ccCCccccccCccc-CCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFN---------AQVNNETITGKFFL-RSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKS  159 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~---------~~~~~~~~~~~~~~-~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~  159 (266)
                      ++   ++++|+++|.++.....         ..++..++...... .....++...|++||+++..++++++.++.   +
T Consensus       116 ~~---~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~---~  189 (275)
T PRK06940        116 AP---GGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWG---E  189 (275)
T ss_pred             hh---CCCEEEEEecccccCcccchhhhccccccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHc---c
Confidence            75   46789999987643210         00000000000000 000012457899999999999999999997   7


Q ss_pred             CCeEEEEecCCcccCCccCcc-hh--HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc-CCCCcccceeecCCCcc
Q 024553          160 RHVSVIAADPGVVKTNIMREV-PS--FLSLMAFTVLKLLGLLQSPEKGINSVLDAAL-APPETSGVYFFGGKGRT  230 (266)
Q Consensus       160 ~~i~v~~v~PG~v~T~~~~~~-~~--~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~-~~~~~~G~~~~~~~g~~  230 (266)
                      .+|+||+|+||+++|++.... ..  ...........+++++.+|+++|+.+++++- .+...+|..+..++|..
T Consensus       190 ~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~~  264 (275)
T PRK06940        190 RGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPAGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGAT  264 (275)
T ss_pred             CCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCCcccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCeE
Confidence            899999999999999986431 11  0111111122356788899999999995432 12355788777777754

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.92  E-value=1.4e-24  Score=183.32  Aligned_cols=175  Identities=12%  Similarity=0.087  Sum_probs=134.9

Q ss_pred             HHHHHHHHHHHhhccCCCCCCcceeeEcCCCC----CCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCCCCeEEE
Q 024553           25 SVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL----ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVN  100 (266)
Q Consensus        25 ~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~  100 (266)
                      +++++++++.+      .++++|+||||||..    .++.+++.++|++++++|+.|++++++.++|+|++   .|+||+
T Consensus       105 si~~~~~~v~~------~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~---~G~ii~  175 (299)
T PRK06300        105 TISEVAEQVKK------DFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNP---GGSTIS  175 (299)
T ss_pred             HHHHHHHHHHH------HcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc---CCeEEE
Confidence            68999999988      679999999999864    35668899999999999999999999999999976   479999


Q ss_pred             EcCCcccccccccCCccccccCcccCCCCCChh-hcchHhHHHHHHHHHHHHHhhCCCCC-CCeEEEEecCCcccCCccC
Q 024553          101 VTSFTHRNVFNAQVNNETITGKFFLRSKCYPCA-RIYEYSKLCLLIFSYELHRNLGLDKS-RHVSVIAADPGVVKTNIMR  178 (266)
Q Consensus       101 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~~~~~~~~~la~~~~~~~~-~~i~v~~v~PG~v~T~~~~  178 (266)
                      ++|..+.                    .+.+.. ..|+++|+++..++++++.++.   + .||+||+|+||+++|++..
T Consensus       176 iss~~~~--------------------~~~p~~~~~Y~asKaAl~~lt~~la~el~---~~~gIrVn~V~PG~v~T~~~~  232 (299)
T PRK06300        176 LTYLASM--------------------RAVPGYGGGMSSAKAALESDTKVLAWEAG---RRWGIRVNTISAGPLASRAGK  232 (299)
T ss_pred             Eeehhhc--------------------CcCCCccHHHHHHHHHHHHHHHHHHHHhC---CCCCeEEEEEEeCCccChhhh
Confidence            9998762                    234444 3799999999999999999997   5 4999999999999999865


Q ss_pred             cchh-HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCccc
Q 024553          179 EVPS-FLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  231 (266)
Q Consensus       179 ~~~~-~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~  231 (266)
                      .... ...........++++..+|++++..+++++.. ....+|..+..++|-.+
T Consensus       233 ~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~  287 (299)
T PRK06300        233 AIGFIERMVDYYQDWAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGANV  287 (299)
T ss_pred             cccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCcce
Confidence            4321 11111111223456778999999999954432 13467887776666433

>PRK05599 hypothetical protein; Provisional

Probab=99.92  E-value=2.7e-24  Score=177.60  Aligned_cols=172  Identities=18%  Similarity=0.262  Sum_probs=138.8

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCC--CCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      ..+.++.||+++.++++++++++.+      .++++|++|||||...+  ..+.+.+.+++++++|+.+++.+++.++|.
T Consensus        49 ~~~~~~~~Dv~d~~~v~~~~~~~~~------~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  122 (246)
T PRK05599         49 TSVHVLSFDAQDLDTHRELVKQTQE------LAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADE  122 (246)
T ss_pred             CceEEEEcccCCHHHHHHHHHHHHH------hcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHH
Confidence            3588999999999999999999988      67899999999998643  234556667888999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |.+++.+|+||++||.++.                    .+.+....|+++|+++..++++++.++.   +.+|+|++++
T Consensus       123 m~~~~~~g~Iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~~~~~la~el~---~~~I~v~~v~  179 (246)
T PRK05599        123 LRAQTAPAAIVAFSSIAGW--------------------RARRANYVYGSTKAGLDAFCQGLADSLH---GSHVRLIIAR  179 (246)
T ss_pred             HHhcCCCCEEEEEeccccc--------------------cCCcCCcchhhHHHHHHHHHHHHHHHhc---CCCceEEEec
Confidence            9865435899999998873                    3455677899999999999999999997   7899999999


Q ss_pred             CCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceee
Q 024553          169 PGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFF  224 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~  224 (266)
                      ||+|+|++.....+.            ....+|+++|+.+++++..+.. ++.++.
T Consensus       180 PG~v~T~~~~~~~~~------------~~~~~pe~~a~~~~~~~~~~~~-~~~~~~  222 (246)
T PRK05599        180 PGFVIGSMTTGMKPA------------PMSVYPRDVAAAVVSAITSSKR-STTLWI  222 (246)
T ss_pred             CCcccchhhcCCCCC------------CCCCCHHHHHHHHHHHHhcCCC-CceEEe
Confidence            999999986543221            0124899999999976655322 334444

>PRK06484 short chain dehydrogenase; Validated

Probab=99.92  E-value=2e-24  Score=196.76  Aligned_cols=190  Identities=21%  Similarity=0.235  Sum_probs=152.5

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC---CCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      +.++..+.+|+++.++++++++++.+      .++++|+||||||+..   +..+.+.++|++++++|+.+++++++.++
T Consensus       314 ~~~~~~~~~D~~~~~~~~~~~~~~~~------~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  387 (520)
T PRK06484        314 GDEHLSVQADITDEAAVESAFAQIQA------RWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAA  387 (520)
T ss_pred             CCceeEEEccCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHH
Confidence            34678899999999999999999988      6789999999999862   45577889999999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |+|.+   .|+||++||.++.                    .+.++...|+++|+++..++++++.++.   +.+|+||+
T Consensus       388 ~~~~~---~g~iv~isS~~~~--------------------~~~~~~~~Y~asKaal~~l~~~la~e~~---~~gI~vn~  441 (520)
T PRK06484        388 RLMSQ---GGVIVNLGSIASL--------------------LALPPRNAYCASKAAVTMLSRSLACEWA---PAGIRVNT  441 (520)
T ss_pred             HHhcc---CCEEEEECchhhc--------------------CCCCCCchhHHHHHHHHHHHHHHHHHhh---hhCeEEEE
Confidence            99933   6899999998873                    3556678899999999999999999997   78999999


Q ss_pred             ecCCcccCCccCcchhH--HHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCccc
Q 024553          167 ADPGVVKTNIMREVPSF--LSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  231 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~~--~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~  231 (266)
                      |+||+|+|++.......  ..........+++++.+|+++|+.+++++.. +...+|..+..++|...
T Consensus       442 v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~s~~~~~~~G~~i~vdgg~~~  509 (520)
T PRK06484        442 VAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLASPAASYVNGATLTVDGGWTA  509 (520)
T ss_pred             EEeCCccCchhhhhccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEECCCccC
Confidence            99999999986543211  1111112223456778999999999965432 23568998887777543

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.92  E-value=6.3e-24  Score=176.01  Aligned_cols=193  Identities=17%  Similarity=0.166  Sum_probs=147.9

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.||+++++++.++++++.+      .++++|++|||||..  .+..+.+.++|++++++|+.+++.+++.++++
T Consensus        50 ~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  123 (252)
T PRK07677         50 GQVLTVQMDVRNPEDVQKMVEQIDE------KFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKY  123 (252)
T ss_pred             CcEEEEEecCCCHHHHHHHHHHHHH------HhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHH
Confidence            4688999999999999999999988      568999999999964  34557788899999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |.+....++||++||..+.                    .+.+...+|+.+|+++..++++|+.++..  ..||+++.|+
T Consensus       124 ~~~~~~~g~ii~isS~~~~--------------------~~~~~~~~Y~~sKaa~~~~~~~la~e~~~--~~gi~v~~v~  181 (252)
T PRK07677        124 WIEKGIKGNIINMVATYAW--------------------DAGPGVIHSAAAKAGVLAMTRTLAVEWGR--KYGIRVNAIA  181 (252)
T ss_pred             HHhcCCCEEEEEEcChhhc--------------------cCCCCCcchHHHHHHHHHHHHHHHHHhCc--ccCeEEEEEe
Confidence            8765336899999998763                    23455678999999999999999999862  4699999999


Q ss_pred             CCcccCCc-cCcch-hHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCccc
Q 024553          169 PGVVKTNI-MREVP-SFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  231 (266)
Q Consensus       169 PG~v~T~~-~~~~~-~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~  231 (266)
                      ||+++|+. ..... ............+++++.+|+++++.+.+++.. +...+|..+..++|...
T Consensus       182 PG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg~~~  247 (252)
T PRK07677        182 PGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFLLSDEAAYINGTCITMDGGQWL  247 (252)
T ss_pred             ecccccccccccccCCHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCccccccCCCEEEECCCeec
Confidence            99999643 22211 111111111122456778999999999865432 23567887776666544

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.92  E-value=5.5e-24  Score=176.30  Aligned_cols=188  Identities=18%  Similarity=0.205  Sum_probs=149.6

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC---CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      .++.++.||+++.+++..+++++.+      .++++|++|||||..   .+..+.+.+++++++++|+.+++.+++.++|
T Consensus        57 ~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  130 (252)
T PRK07035         57 GKAEALACHIGEMEQIDALFAHIRE------RHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGK  130 (252)
T ss_pred             CeEEEEEcCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            4678999999999999999999988      668899999999974   3445667888999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++.. .++|+++||..+.                    .+.++...|+.+|++++.+++++++++.   +.+|++++|
T Consensus       131 ~~~~~~-~~~iv~~sS~~~~--------------------~~~~~~~~Y~~sK~al~~~~~~l~~e~~---~~gi~v~~i  186 (252)
T PRK07035        131 LMKEQG-GGSIVNVASVNGV--------------------SPGDFQGIYSITKAAVISMTKAFAKECA---PFGIRVNAL  186 (252)
T ss_pred             HHHhCC-CcEEEEECchhhc--------------------CCCCCCcchHHHHHHHHHHHHHHHHHHh---hcCEEEEEE
Confidence            998766 7899999998763                    2445667899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHHH-HHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCC
Q 024553          168 DPGVVKTNIMREVPSFLSLM-AFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKG  228 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g  228 (266)
                      +||.++|++........... ......+.+++.+|+++|+.+++++... ...+|.++..++|
T Consensus       187 ~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~dgg  249 (252)
T PRK07035        187 LPGLTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYLASDASSYTTGECLNVDGG  249 (252)
T ss_pred             eeccccCcccccccCCHHHHHHHHccCCCCCcCCHHHHHHHHHHHhCccccCccCCEEEeCCC
Confidence            99999999876532211111 1111224566789999999999544322 2457888876655

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.92  E-value=5.2e-24  Score=176.48  Aligned_cols=193  Identities=21%  Similarity=0.223  Sum_probs=151.5

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +..+.++++|+++.++++++++++.+      .++++|+||||||...  +..+.+.+.|++++++|+.+++.+++.+.+
T Consensus        46 ~~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  119 (252)
T PRK07856         46 GRPAEFHAADVRDPDQVAALVDAIVE------RHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANA  119 (252)
T ss_pred             CCceEEEEccCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            34688999999999999999999988      6689999999999763  345567788999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|.++...++||++||..+.                    .+.+....|+.+|++++.++++++.++.   +. |+++++
T Consensus       120 ~~~~~~~~g~ii~isS~~~~--------------------~~~~~~~~Y~~sK~a~~~l~~~la~e~~---~~-i~v~~i  175 (252)
T PRK07856        120 VMQQQPGGGSIVNIGSVSGR--------------------RPSPGTAAYGAAKAGLLNLTRSLAVEWA---PK-VRVNAV  175 (252)
T ss_pred             HHHhcCCCcEEEEEcccccC--------------------CCCCCCchhHHHHHHHHHHHHHHHHHhc---CC-eEEEEE
Confidence            99875436899999998862                    3556678899999999999999999996   55 999999


Q ss_pred             cCCcccCCccCcchh-HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCcccc
Q 024553          168 DPGVVKTNIMREVPS-FLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~~  232 (266)
                      +||+|+|++...... ...........+++++.+|+++|+.+++++.. +...+|..+..++|...+
T Consensus       176 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~L~~~~~~~i~G~~i~vdgg~~~~  242 (252)
T PRK07856        176 VVGLVRTEQSELHYGDAEGIAAVAATVPLGRLATPADIAWACLFLASDLASYVSGANLEVHGGGERP  242 (252)
T ss_pred             EeccccChHHhhhccCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcccCCccCCEEEECCCcchH
Confidence            999999997643211 11111112223456778999999999965432 235678888877776543

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.92  E-value=3.7e-24  Score=178.51  Aligned_cols=186  Identities=19%  Similarity=0.207  Sum_probs=145.0

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC---CCCcCCCcc----cchhhhhhhhhHHHHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEG----YDQMMSTNYIGAFFLTK   83 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~---~~~~~~~~~----~~~~~~~n~~~~~~l~~   83 (266)
                      .++.+++||+++.+++.++++++.+      .++++|++|||||+..   +..+.+.+.    |++++++|+.+++.+++
T Consensus        52 ~~~~~~~~D~~~~~~~~~~~~~~~~------~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  125 (263)
T PRK06200         52 DHVLVVEGDVTSYADNQRAVDQTVD------AFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAK  125 (263)
T ss_pred             CcceEEEccCCCHHHHHHHHHHHHH------hcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHH
Confidence            3578999999999999999999988      6789999999999853   333455554    88999999999999999


Q ss_pred             hhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeE
Q 024553           84 LLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVS  163 (266)
Q Consensus        84 ~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~  163 (266)
                      .++|.|+++  .++||+++|..+..                    +.++...|+.+|++++.++++++.++.   + +|+
T Consensus       126 ~~~~~~~~~--~g~iv~~sS~~~~~--------------------~~~~~~~Y~~sK~a~~~~~~~la~el~---~-~Ir  179 (263)
T PRK06200        126 AALPALKAS--GGSMIFTLSNSSFY--------------------PGGGGPLYTASKHAVVGLVRQLAYELA---P-KIR  179 (263)
T ss_pred             HHHHHHHhc--CCEEEEECChhhcC--------------------CCCCCchhHHHHHHHHHHHHHHHHHHh---c-CcE
Confidence            999998764  48999999988632                    344566899999999999999999996   4 599


Q ss_pred             EEEecCCcccCCccCcchh----------HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC----CcccceeecCCCc
Q 024553          164 VIAADPGVVKTNIMREVPS----------FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP----ETSGVYFFGGKGR  229 (266)
Q Consensus       164 v~~v~PG~v~T~~~~~~~~----------~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~----~~~G~~~~~~~g~  229 (266)
                      ||+|+||+|+|++......          ...........+++++.+|+|+|+.+++  +.++    ..+|..+..++|.
T Consensus       180 vn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~f--l~s~~~~~~itG~~i~vdgG~  257 (263)
T PRK06200        180 VNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTGPYVL--LASRRNSRALTGVVINADGGL  257 (263)
T ss_pred             EEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCHHHHhhhhhh--eecccccCcccceEEEEcCce
Confidence            9999999999998642110          0011111222366788899999999994  4443    3478888777764


Q ss_pred             c
Q 024553          230 T  230 (266)
Q Consensus       230 ~  230 (266)
                      .
T Consensus       258 ~  258 (263)
T PRK06200        258 G  258 (263)
T ss_pred             e
Confidence            3

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.92  E-value=6.7e-24  Score=176.30  Aligned_cols=192  Identities=20%  Similarity=0.220  Sum_probs=151.6

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.+|+++.+++.++++++.+      .++++|++|||||..  .+..+.+.+++++++++|+.+++.+++.+++.
T Consensus        52 ~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  125 (257)
T PRK07067         52 PAAIAVSLDVTRQDSIDRIVAAAVE------RFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARH  125 (257)
T ss_pred             CceEEEEccCCCHHHHHHHHHHHHH------HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHH
Confidence            3588999999999999999999988      668999999999976  34556778899999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |.++..+++||++||..+.                    .+.++...|+.+|+++..++++++.++.   +.+|+++.|.
T Consensus       126 ~~~~~~~~~iv~~sS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~i~  182 (257)
T PRK07067        126 MVEQGRGGKIINMASQAGR--------------------RGEALVSHYCATKAAVISYTQSAALALI---RHGINVNAIA  182 (257)
T ss_pred             HHhcCCCcEEEEeCCHHhC--------------------CCCCCCchhhhhHHHHHHHHHHHHHHhc---ccCeEEEEEe
Confidence            9775435799999997652                    2455677899999999999999999997   7899999999


Q ss_pred             CCcccCCccCcchh----------HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCccc
Q 024553          169 PGVVKTNIMREVPS----------FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  231 (266)
Q Consensus       169 PG~v~T~~~~~~~~----------~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~  231 (266)
                      ||+++|++......          ...........+++++.+|+|+|+.+++++... ...+|.-+..++|+.+
T Consensus       183 pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~~~  256 (257)
T PRK07067        183 PGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLASADADYIVAQTYNVDGGNWM  256 (257)
T ss_pred             eCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHHHhCcccccccCcEEeecCCEeC
Confidence            99999987543211          011111112235667889999999999655432 2356888877777543

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.92  E-value=8.5e-24  Score=175.94  Aligned_cols=188  Identities=17%  Similarity=0.158  Sum_probs=146.2

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC---CCCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      +.++.++.||+++.+++.++++++.+      .++++|++|||||..   .+..+.+.++|++.+++|+.+++.+++.++
T Consensus        55 ~~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  128 (260)
T PRK12823         55 GGEALALTADLETYAGAQAAMAAAVE------AFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVL  128 (260)
T ss_pred             CCeEEEEEEeCCCHHHHHHHHHHHHH------HcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHH
Confidence            34688999999999999999999988      668999999999964   456677889999999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |.|++++ .++||++||..+..                      .....|+.+|++++.++++++.++.   +.+|++++
T Consensus       129 ~~~~~~~-~g~iv~~sS~~~~~----------------------~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~  182 (260)
T PRK12823        129 PHMLAQG-GGAIVNVSSIATRG----------------------INRVPYSAAKGGVNALTASLAFEYA---EHGIRVNA  182 (260)
T ss_pred             HHHHhcC-CCeEEEEcCccccC----------------------CCCCccHHHHHHHHHHHHHHHHHhc---ccCcEEEE
Confidence            9998766 68999999987521                      1235699999999999999999997   78999999


Q ss_pred             ecCCcccCCccCcch------h-HH----HH-HHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          167 ADPGVVKTNIMREVP------S-FL----SL-MAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       167 v~PG~v~T~~~~~~~------~-~~----~~-~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      |+||+|.|++.....      . ..    .+ .......+++++.+|+|+|+.+++++... ...+|..+..++|+
T Consensus       183 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~  258 (260)
T PRK12823        183 VAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQVAAILFLASDEASYITGTVLPVGGGD  258 (260)
T ss_pred             EecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCCHHHHHHHHHHHcCcccccccCcEEeecCCC
Confidence            999999998632100      0 00    00 01111234567779999999999544221 23578887777665

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.92  E-value=7.5e-24  Score=176.24  Aligned_cols=187  Identities=21%  Similarity=0.180  Sum_probs=145.8

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.+|+++.+++..++++          .+++|++|||||..  .+..+.+.++|++++++|+.+++.+++.++|
T Consensus        56 ~~~~~~~~~D~~~~~~~~~~~~~----------~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  125 (259)
T PRK06125         56 GVDVAVHALDLSSPEAREQLAAE----------AGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYP  125 (259)
T ss_pred             CCceEEEEecCCCHHHHHHHHHH----------hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            45688999999999999888753          36899999999986  3456778899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++++ .++||+++|..+                    ..+.+....|+++|+++..++++++.++.   +.+|+||+|
T Consensus       126 ~~~~~~-~g~iv~iss~~~--------------------~~~~~~~~~y~ask~al~~~~~~la~e~~---~~gi~v~~i  181 (259)
T PRK06125        126 RMKARG-SGVIVNVIGAAG--------------------ENPDADYICGSAGNAALMAFTRALGGKSL---DDGVRVVGV  181 (259)
T ss_pred             HHHHcC-CcEEEEecCccc--------------------cCCCCCchHhHHHHHHHHHHHHHHHHHhC---ccCeEEEEE
Confidence            998765 689999999876                    23445567799999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchh---------HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCcc
Q 024553          168 DPGVVKTNIMREVPS---------FLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  230 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~---------~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~  230 (266)
                      +||+++|++......         ...+..+....+.+++.+|+++|+.+++++-. +...+|..+..++|..
T Consensus       182 ~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~vdgg~~  254 (259)
T PRK06125        182 NPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLVAFLASPRSGYTSGTVVTVDGGIS  254 (259)
T ss_pred             ecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHHHHHHcCchhccccCceEEecCCee
Confidence            999999997543211         11111111223456778999999999965422 1245788888777754

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.92  E-value=7.7e-24  Score=175.74  Aligned_cols=190  Identities=15%  Similarity=0.211  Sum_probs=152.4

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.+|+++.++++++++++.+      .++++|+||||||..  .+..+.+.++|++++++|+.+++.+++.+.+.
T Consensus        59 ~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  132 (255)
T PRK07523         59 LSAHALAFDVTDHDAVRAAIDAFEA------EIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARH  132 (255)
T ss_pred             ceEEEEEccCCCHHHHHHHHHHHHH------hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            4688999999999999999999988      678999999999986  34556788899999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |++++ .++||++||..+                    ..+.++...|+.+|.+++.++++++.++.   +.+|+|+++.
T Consensus       133 ~~~~~-~g~iv~iss~~~--------------------~~~~~~~~~y~~sK~a~~~~~~~~a~e~~---~~gi~v~~i~  188 (255)
T PRK07523        133 MIARG-AGKIINIASVQS--------------------ALARPGIAPYTATKGAVGNLTKGMATDWA---KHGLQCNAIA  188 (255)
T ss_pred             HHHhC-CeEEEEEccchh--------------------ccCCCCCccHHHHHHHHHHHHHHHHHHhh---HhCeEEEEEE
Confidence            98766 789999999875                    23456677899999999999999999997   7899999999


Q ss_pred             CCcccCCccCcchhHHHH-HHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCcc
Q 024553          169 PGVVKTNIMREVPSFLSL-MAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  230 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~  230 (266)
                      ||+++|++.......... .......+++++..|+|+|+.+++++.. +...+|..+..++|..
T Consensus       189 pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg~~  252 (255)
T PRK07523        189 PGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVFLASDASSFVNGHVLYVDGGIT  252 (255)
T ss_pred             ECcccCchhhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCcEEEECCCee
Confidence            999999986543211111 1122233566788999999999954432 1244688877777653

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.2e-23  Score=175.08  Aligned_cols=190  Identities=20%  Similarity=0.245  Sum_probs=148.7

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC----CCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA----TSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      .++.++.||+++.+++.++++++.+      .++++|++|||||...    +..+.+.++|++++++|+.+++.+++.++
T Consensus        49 ~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  122 (260)
T PRK06523         49 EGVEFVAADLTTAEGCAAVARAVLE------RLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALL  122 (260)
T ss_pred             CceeEEecCCCCHHHHHHHHHHHHH------HcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHH
Confidence            3578999999999999999999988      6689999999999642    34557788999999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCC-hhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYP-CARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVI  165 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~  165 (266)
                      |+|++++ .++||++||..+..                    +.+ ....|+.+|++++.++++++.++.   +.+|+++
T Consensus       123 ~~~~~~~-~g~ii~isS~~~~~--------------------~~~~~~~~Y~~sK~a~~~l~~~~a~~~~---~~gi~v~  178 (260)
T PRK06523        123 PGMIARG-SGVIIHVTSIQRRL--------------------PLPESTTAYAAAKAALSTYSKSLSKEVA---PKGVRVN  178 (260)
T ss_pred             HHHHhcC-CcEEEEEecccccC--------------------CCCCCcchhHHHHHHHHHHHHHHHHHHh---hcCcEEE
Confidence            9998876 68999999987632                    222 567899999999999999999997   7899999


Q ss_pred             EecCCcccCCccCcchhHH---------HHHHHH----HHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCcc
Q 024553          166 AADPGVVKTNIMREVPSFL---------SLMAFT----VLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  230 (266)
Q Consensus       166 ~v~PG~v~T~~~~~~~~~~---------~~~~~~----~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~  230 (266)
                      +|+||+|+|++........         ......    ...+++++.+|+++|+.+++++.. +...+|..+..++|..
T Consensus       179 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg~~  257 (260)
T PRK06523        179 TVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAELIAFLASDRAASITGTEYVIDGGTV  257 (260)
T ss_pred             EEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHHHHHHHHHHHhCcccccccCceEEecCCcc
Confidence            9999999999864321110         000000    112456678999999999965532 2356788777666643

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.91  E-value=1.5e-23  Score=171.97  Aligned_cols=184  Identities=20%  Similarity=0.198  Sum_probs=145.2

Q ss_pred             EEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           13 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        13 ~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      +.++.||+++.+++.++++++.+      .++++|++|||||...  ...+.+.++|++++++|+.+++.+++.++|.|+
T Consensus        48 ~~~~~~D~~~~~~~~~~~~~~~~------~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~  121 (236)
T PRK06483         48 AQCIQADFSTNAGIMAFIDELKQ------HTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLR  121 (236)
T ss_pred             CEEEEcCCCCHHHHHHHHHHHHh------hCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHH
Confidence            57899999999999999999988      6688999999999753  234567889999999999999999999999998


Q ss_pred             cCC-CCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           91 NSP-VPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        91 ~~~-~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      +.+ ..++||+++|..+                    ..+.+....|+.+|++++.++++++.++.   + +|+||+|+|
T Consensus       122 ~~~~~~g~iv~~ss~~~--------------------~~~~~~~~~Y~asKaal~~l~~~~a~e~~---~-~irvn~v~P  177 (236)
T PRK06483        122 GHGHAASDIIHITDYVV--------------------EKGSDKHIAYAASKAALDNMTLSFAAKLA---P-EVKVNSIAP  177 (236)
T ss_pred             hCCCCCceEEEEcchhh--------------------ccCCCCCccHHHHHHHHHHHHHHHHHHHC---C-CcEEEEEcc
Confidence            653 1479999999875                    23456677899999999999999999996   4 699999999


Q ss_pred             CcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcc
Q 024553          170 GVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRT  230 (266)
Q Consensus       170 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~  230 (266)
                      |++.|+....  ... ........++++...|+++|+.+.+++. +...+|..+..++|..
T Consensus       178 g~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~va~~~~~l~~-~~~~~G~~i~vdgg~~  234 (236)
T PRK06483        178 ALILFNEGDD--AAY-RQKALAKSLLKIEPGEEEIIDLVDYLLT-SCYVTGRSLPVDGGRH  234 (236)
T ss_pred             CceecCCCCC--HHH-HHHHhccCccccCCCHHHHHHHHHHHhc-CCCcCCcEEEeCcccc
Confidence            9998764321  111 1111122345667799999999997663 4566788877776643

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1e-23  Score=175.71  Aligned_cols=192  Identities=22%  Similarity=0.207  Sum_probs=150.5

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|++|||||..  .+..+.+.+.+++++++|+.+++.+++.+++
T Consensus        53 ~~~~~~~~~Dl~~~~~v~~~~~~~~~------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  126 (263)
T PRK08226         53 GHRCTAVVADVRDPASVAAAIKRAKE------KEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLP  126 (263)
T ss_pred             CCceEEEECCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            35688999999999999999999998      678999999999985  3455667888999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      ++++.+ .++||++||..+..                   .+.+....|+.+|++++.++++++.++.   +.+|+|+++
T Consensus       127 ~~~~~~-~~~iv~isS~~~~~-------------------~~~~~~~~Y~~sK~a~~~~~~~la~~~~---~~~i~v~~i  183 (263)
T PRK08226        127 EMIARK-DGRIVMMSSVTGDM-------------------VADPGETAYALTKAAIVGLTKSLAVEYA---QSGIRVNAI  183 (263)
T ss_pred             HHHhcC-CcEEEEECcHHhcc-------------------cCCCCcchHHHHHHHHHHHHHHHHHHhc---ccCcEEEEE
Confidence            987765 68999999976521                   1334567899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchh-------HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCcc
Q 024553          168 DPGVVKTNIMREVPS-------FLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  230 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~-------~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~  230 (266)
                      +||+++|++......       ...........+++++.+|+++|+.+++++.. +...+|..+..++|..
T Consensus       184 ~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~dgg~~  254 (263)
T PRK08226        184 CPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLASDESSYLTGTQNVIDGGST  254 (263)
T ss_pred             ecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCchhcCCcCceEeECCCcc
Confidence            999999998654321       11111111122456678999999999854432 2356788877777754

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.91  E-value=1e-23  Score=174.36  Aligned_cols=192  Identities=17%  Similarity=0.221  Sum_probs=153.2

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++++++.++++++.+      .++++|+||||||..  .+..+.+.+.++.++++|+.+++.+++.+++
T Consensus        53 ~~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  126 (250)
T PRK08063         53 GRKALAVKANVGDVEKIKEMFAQIDE------EFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAK  126 (250)
T ss_pred             CCeEEEEEcCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            35688999999999999999999988      668999999999975  3556677888999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++++ .++||++||..+.                    .+.+....|+.+|++++.++++++.++.   +.+|++++|
T Consensus       127 ~~~~~~-~g~iv~~sS~~~~--------------------~~~~~~~~y~~sK~a~~~~~~~~~~~~~---~~~i~v~~i  182 (250)
T PRK08063        127 LMEKVG-GGKIISLSSLGSI--------------------RYLENYTTVGVSKAALEALTRYLAVELA---PKGIAVNAV  182 (250)
T ss_pred             HHHhcC-CeEEEEEcchhhc--------------------cCCCCccHHHHHHHHHHHHHHHHHHHHh---HhCeEEEeE
Confidence            998776 7899999997652                    2445567899999999999999999987   789999999


Q ss_pred             cCCcccCCccCcchhHHHHH-HHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCccc
Q 024553          168 DPGVVKTNIMREVPSFLSLM-AFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  231 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~  231 (266)
                      +||+++|++....+...... ......+.+++.+|+++|+.+++++..+ ...+|+++..++|...
T Consensus       183 ~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~~~  248 (250)
T PRK08063        183 SGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAVLFLCSPEADMIRGQTIIVDGGRSL  248 (250)
T ss_pred             ecCcccCchhhhccCchHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCeee
Confidence            99999999865433221111 1111223455779999999999766543 2457888887777653

>TIGR02415 23BDH acetoin reductases

Probab=99.91  E-value=2e-23  Score=173.00  Aligned_cols=190  Identities=21%  Similarity=0.269  Sum_probs=152.0

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++++++.++++++.+      ..+++|+||||||...  +..+.+.++|++++++|+.+++.+++.+++
T Consensus        48 ~~~~~~~~~Dl~~~~~i~~~~~~~~~------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  121 (254)
T TIGR02415        48 GGKAVAYKLDVSDKDQVFSAIDQAAE------KFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAAR  121 (254)
T ss_pred             CCeEEEEEcCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            44688999999999999999999988      6689999999999863  455778889999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++.+..++||++||..+.                    .+.+....|+.+|++++.++++++.++.   +.+|+|+++
T Consensus       122 ~~~~~~~~~~iv~~sS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~l~~~~~---~~~i~v~~v  178 (254)
T TIGR02415       122 QFKKQGHGGKIINAASIAGH--------------------EGNPILSAYSSTKFAVRGLTQTAAQELA---PKGITVNAY  178 (254)
T ss_pred             HHHhCCCCeEEEEecchhhc--------------------CCCCCCcchHHHHHHHHHHHHHHHHHhc---ccCeEEEEE
Confidence            99886535899999998762                    3456678899999999999999999997   779999999


Q ss_pred             cCCcccCCccCcchhHHH----------HHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCC
Q 024553          168 DPGVVKTNIMREVPSFLS----------LMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKG  228 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~----------~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g  228 (266)
                      +||+++|++.........          ...+....+.+++.+|+++++.+++++..+ ...+|.++..++|
T Consensus       179 ~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g  250 (254)
T TIGR02415       179 CPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLASEDSDYITGQSILVDGG  250 (254)
T ss_pred             ecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHHHHHHhhcccccCCccCcEEEecCC
Confidence            999999998654322110          111112234566789999999999655443 2557888876665

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.91  E-value=7.7e-24  Score=179.55  Aligned_cols=173  Identities=20%  Similarity=0.293  Sum_probs=141.5

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++..+.||+++.+++.++++++.+      .++++|++|||||+.  .+..+.+.++|++++++|+.|++.+++.++|
T Consensus        56 ~~~~~~~~~Dv~d~~~v~~~~~~~~~------~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~  129 (296)
T PRK05872         56 DDRVLTVVADVTDLAAMQAAAEEAVE------RFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLP  129 (296)
T ss_pred             CCcEEEEEecCCCHHHHHHHHHHHHH------HcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            34677888999999999999999988      668999999999986  3556778899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|.+.  .|+||++||..+.                    .+.+....|+.+|++++.++++++.++.   ..+|+++++
T Consensus       130 ~~~~~--~g~iv~isS~~~~--------------------~~~~~~~~Y~asKaal~~~~~~l~~e~~---~~gi~v~~v  184 (296)
T PRK05872        130 ALIER--RGYVLQVSSLAAF--------------------AAAPGMAAYCASKAGVEAFANALRLEVA---HHGVTVGSA  184 (296)
T ss_pred             HHHHc--CCEEEEEeCHhhc--------------------CCCCCchHHHHHHHHHHHHHHHHHHHHH---HHCcEEEEE
Confidence            99764  4899999998863                    3456678899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHH-H--HHHHHhhcCCCHHHHHHHHHHHhc
Q 024553          168 DPGVVKTNIMREVPSFLSLMA-F--TVLKLLGLLQSPEKGINSVLDAAL  213 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~-~--~~~~~~~~~~~p~~~a~~~~~~~~  213 (266)
                      +||+++|++............ .  ....++++..+|+++|+.+++++.
T Consensus       185 ~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~i~~~~~  233 (296)
T PRK05872        185 YLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAAAFVDGIE  233 (296)
T ss_pred             ecCcccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHHHHHHHHh
Confidence            999999998765432211111 1  111244567799999999997654

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.91  E-value=7.3e-24  Score=176.63  Aligned_cols=189  Identities=17%  Similarity=0.144  Sum_probs=143.3

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC---CCCcCCC----cccchhhhhhhhhHHHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA---TSSRLTP----EGYDQMMSTNYIGAFFLT   82 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~---~~~~~~~----~~~~~~~~~n~~~~~~l~   82 (266)
                      +.++.++.+|+++.+++.++++++.+      .++++|++|||||+..   +..+.+.    +.|++++++|+.+++.++
T Consensus        50 ~~~~~~~~~D~~~~~~~~~~~~~~~~------~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~  123 (262)
T TIGR03325        50 GDAVVGVEGDVRSLDDHKEAVARCVA------AFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAV  123 (262)
T ss_pred             CCceEEEEeccCCHHHHHHHHHHHHH------HhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHH
Confidence            34688999999999999999999988      6689999999999752   2223333    468999999999999999


Q ss_pred             HhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCe
Q 024553           83 KLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHV  162 (266)
Q Consensus        83 ~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i  162 (266)
                      +.++|.|.++  .++||+++|..+.                    .+.+....|+++|++++.++++++.++.   +. |
T Consensus       124 ~~~~~~~~~~--~g~iv~~sS~~~~--------------------~~~~~~~~Y~~sKaa~~~l~~~la~e~~---~~-i  177 (262)
T TIGR03325       124 KAALPALVAS--RGSVIFTISNAGF--------------------YPNGGGPLYTAAKHAVVGLVKELAFELA---PY-V  177 (262)
T ss_pred             HHHHHHHhhc--CCCEEEEecccee--------------------cCCCCCchhHHHHHHHHHHHHHHHHhhc---cC-e
Confidence            9999999764  4789999998763                    2344556899999999999999999996   55 9


Q ss_pred             EEEEecCCcccCCccCcch----hH-----HHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC--CcccceeecCCCcc
Q 024553          163 SVIAADPGVVKTNIMREVP----SF-----LSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP--ETSGVYFFGGKGRT  230 (266)
Q Consensus       163 ~v~~v~PG~v~T~~~~~~~----~~-----~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~--~~~G~~~~~~~g~~  230 (266)
                      +||+|+||++.|++.....    ..     ..........+++++.+|+++|+.+++++..+.  ..+|..+..++|..
T Consensus       178 rvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~~~~~~tG~~i~vdgg~~  256 (262)
T TIGR03325       178 RVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYVFFATRGDTVPATGAVLNYDGGMG  256 (262)
T ss_pred             EEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCCCCCChHHhhhheeeeecCCCcccccceEEEecCCee
Confidence            9999999999999864310    00     000111122357788899999999994332222  24788777666643

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.9e-23  Score=179.29  Aligned_cols=173  Identities=21%  Similarity=0.248  Sum_probs=141.1

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.+|+++.++++++++++.+      .++++|++|||||+.  .+..+.+.+++++++++|+.|++.+++.++|
T Consensus        55 g~~~~~~~~Dv~d~~~v~~~~~~~~~------~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp  128 (330)
T PRK06139         55 GAEVLVVPTDVTDADQVKALATQAAS------FGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALP  128 (330)
T ss_pred             CCcEEEEEeeCCCHHHHHHHHHHHHH------hcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHH
Confidence            45788999999999999999999988      568999999999986  3456778889999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCC-CCeEEEE
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKS-RHVSVIA  166 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~-~~i~v~~  166 (266)
                      +|++++ .++||+++|..+.                    .+.+....|+++|+++..|+++|+.++.   . .+|+|+.
T Consensus       129 ~~~~~~-~g~iV~isS~~~~--------------------~~~p~~~~Y~asKaal~~~~~sL~~El~---~~~gI~V~~  184 (330)
T PRK06139        129 IFKKQG-HGIFINMISLGGF--------------------AAQPYAAAYSASKFGLRGFSEALRGELA---DHPDIHVCD  184 (330)
T ss_pred             HHHHcC-CCEEEEEcChhhc--------------------CCCCCchhHHHHHHHHHHHHHHHHHHhC---CCCCeEEEE
Confidence            999876 7899999998763                    3556678899999999999999999996   4 4899999


Q ss_pred             ecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC
Q 024553          167 ADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP  216 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~  216 (266)
                      |+||+++|++..........    ...+...+.+|+++|+.+++++..++
T Consensus       185 v~Pg~v~T~~~~~~~~~~~~----~~~~~~~~~~pe~vA~~il~~~~~~~  230 (330)
T PRK06139        185 VYPAFMDTPGFRHGANYTGR----RLTPPPPVYDPRRVAKAVVRLADRPR  230 (330)
T ss_pred             EecCCccCcccccccccccc----cccCCCCCCCHHHHHHHHHHHHhCCC
Confidence            99999999987542211100    00111234599999999997765543

>PLN02253 xanthoxin dehydrogenase

Probab=99.91  E-value=2.6e-23  Score=174.93  Aligned_cols=189  Identities=20%  Similarity=0.211  Sum_probs=145.0

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC----CCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA----TSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      .++.++++|+++.+++.++++++.+      .++++|+||||||...    +..+.+.++|++++++|+.|++.+++.++
T Consensus        66 ~~~~~~~~Dl~d~~~~~~~~~~~~~------~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~  139 (280)
T PLN02253         66 PNVCFFHCDVTVEDDVSRAVDFTVD------KFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAA  139 (280)
T ss_pred             CceEEEEeecCCHHHHHHHHHHHHH------HhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHH
Confidence            4689999999999999999999988      6689999999999863    24566788999999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      +.|.++. .++||+++|..+.                    .+.+....|+.+|++++.++++++.++.   .++|+|+.
T Consensus       140 ~~~~~~~-~g~ii~isS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~  195 (280)
T PLN02253        140 RIMIPLK-KGSIVSLCSVASA--------------------IGGLGPHAYTGSKHAVLGLTRSVAAELG---KHGIRVNC  195 (280)
T ss_pred             HHHHhcC-CceEEEecChhhc--------------------ccCCCCcccHHHHHHHHHHHHHHHHHhh---hcCeEEEE
Confidence            9998765 6899999998762                    2334456899999999999999999997   78999999


Q ss_pred             ecCCcccCCccCcc-hhHH---HHHH-HHH----HHHh-hcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCc
Q 024553          167 ADPGVVKTNIMREV-PSFL---SLMA-FTV----LKLL-GLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  229 (266)
Q Consensus       167 v~PG~v~T~~~~~~-~~~~---~~~~-~~~----~~~~-~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~  229 (266)
                      ++||++.|++.... +...   .... +..    ..++ ++..+|+|+|+.+++++.. +...+|..+..++|.
T Consensus       196 i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdgG~  269 (280)
T PLN02253        196 VSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANAVLFLASDEARYISGLNLMIDGGF  269 (280)
T ss_pred             EeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHHHHHHHHHhhcCcccccccCcEEEECCch
Confidence            99999999875432 1110   1100 000    0111 3446899999999954322 123467777666654

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.91  E-value=3.3e-23  Score=175.14  Aligned_cols=188  Identities=21%  Similarity=0.176  Sum_probs=149.5

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC---CCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      +.++.++.||+++.+++.++++++.+      ..+++|+||||||...   +..+.+.++|++++++|+.+++.+++.++
T Consensus        95 ~~~~~~~~~Dl~~~~~~~~~~~~i~~------~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~  168 (290)
T PRK06701         95 GVKCLLIPGDVSDEAFCKDAVEETVR------ELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAAL  168 (290)
T ss_pred             CCeEEEEEccCCCHHHHHHHHHHHHH------HcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence            34688999999999999999999988      6688999999999752   34567788999999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      +.|+.   .++||++||..+..                    +.+....|+++|+++..++++++.++.   +.+|++++
T Consensus       169 ~~~~~---~g~iV~isS~~~~~--------------------~~~~~~~Y~~sK~a~~~l~~~la~~~~---~~gIrv~~  222 (290)
T PRK06701        169 PHLKQ---GSAIINTGSITGYE--------------------GNETLIDYSATKGAIHAFTRSLAQSLV---QKGIRVNA  222 (290)
T ss_pred             HHHhh---CCeEEEEecccccC--------------------CCCCcchhHHHHHHHHHHHHHHHHHhh---hcCeEEEE
Confidence            99965   47999999988632                    344556799999999999999999997   78999999


Q ss_pred             ecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          167 ADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      |+||+++|++............+....+++++.+|+++|+.+++++... ...+|..+..++|.
T Consensus       223 i~pG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ll~~~~~~~~G~~i~idgg~  286 (290)
T PRK06701        223 VAPGPIWTPLIPSDFDEEKVSQFGSNTPMQRPGQPEELAPAYVFLASPDSSYITGQMLHVNGGV  286 (290)
T ss_pred             EecCCCCCcccccccCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCcccCCccCcEEEeCCCc
Confidence            9999999998754322111111222234566779999999999655432 34578887766664

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.91  E-value=7.3e-25  Score=163.69  Aligned_cols=189  Identities=22%  Similarity=0.245  Sum_probs=151.2

Q ss_pred             hcccCCCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHH
Q 024553            4 ITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFL   81 (266)
Q Consensus         4 i~~~~~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l   81 (266)
                      |.+..|. -+..+..|++..+.++++..          ..+++|.+|||||+.  .|+.+++.++++.+|++|+.+.+++
T Consensus        47 LV~e~p~-~I~Pi~~Dls~wea~~~~l~----------~v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v  115 (245)
T KOG1207|consen   47 LVKETPS-LIIPIVGDLSAWEALFKLLV----------PVFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILV  115 (245)
T ss_pred             HHhhCCc-ceeeeEecccHHHHHHHhhc----------ccCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeH
Confidence            3334433 48999999999777766553          457899999999987  6888999999999999999999999


Q ss_pred             HHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCC
Q 024553           82 TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRH  161 (266)
Q Consensus        82 ~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~  161 (266)
                      .+...+-+..+..+|.||++||.++                    .++..+...|+++|+++.+++|+||.|++   +++
T Consensus       116 ~Q~var~lv~R~~~GaIVNvSSqas--------------------~R~~~nHtvYcatKaALDmlTk~lAlELG---p~k  172 (245)
T KOG1207|consen  116 AQLVARNLVDRQIKGAIVNVSSQAS--------------------IRPLDNHTVYCATKAALDMLTKCLALELG---PQK  172 (245)
T ss_pred             HHHHHHhhhhccCCceEEEecchhc--------------------ccccCCceEEeecHHHHHHHHHHHHHhhC---cce
Confidence            9997666655544788999999987                    56888899999999999999999999998   999


Q ss_pred             eEEEEecCCcccCCccCcchh-HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCC---cccceeecCCC
Q 024553          162 VSVIAADPGVVKTNIMREVPS-FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPE---TSGVYFFGGKG  228 (266)
Q Consensus       162 i~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~---~~G~~~~~~~g  228 (266)
                      ||||+|.|-.|-|+|.+..+. ..+........|++++...+++..+++  ++.++.   .+|..+-.++|
T Consensus       173 IRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~rFaEV~eVVnA~l--fLLSd~ssmttGstlpveGG  241 (245)
T KOG1207|consen  173 IRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLKRFAEVDEVVNAVL--FLLSDNSSMTTGSTLPVEGG  241 (245)
T ss_pred             eEeeccCCeEEEecccccccCCchhccchhhhCchhhhhHHHHHHhhhe--eeeecCcCcccCceeeecCC
Confidence            999999999999999876432 333333445567788889999999999  554543   34555544443

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.91  E-value=3.6e-23  Score=170.03  Aligned_cols=187  Identities=17%  Similarity=0.171  Sum_probs=147.3

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhH-
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLL-   86 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-   86 (266)
                      +.++.++.+|+++.+++.++++++.+      .++++|++|||||...  +..+.+.++|+.++++|+.+++.+++.++ 
T Consensus        47 ~~~~~~~~~Dl~~~~~~~~~~~~~~~------~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  120 (239)
T TIGR01831        47 GGNARLLQFDVADRVACRTLLEADIA------EHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTM  120 (239)
T ss_pred             CCeEEEEEccCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            34689999999999999999999887      6689999999999863  34566788999999999999999999875 


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |.+++.+ .++||++||..+.                    .+.+....|+.+|+++..++++++.++.   ..+|+++.
T Consensus       121 ~~~~~~~-~~~iv~vsS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~  176 (239)
T TIGR01831       121 PMIRARQ-GGRIITLASVSGV--------------------MGNRGQVNYSAAKAGLIGATKALAVELA---KRKITVNC  176 (239)
T ss_pred             HHHhhcC-CeEEEEEcchhhc--------------------cCCCCCcchHHHHHHHHHHHHHHHHHHh---HhCeEEEE
Confidence            5555444 6899999998763                    2445667899999999999999999997   78999999


Q ss_pred             ecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCC
Q 024553          167 ADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKG  228 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g  228 (266)
                      ++||+++|++.........  ......+++++.+|+++++.+++++.. +...+|..+..++|
T Consensus       177 v~Pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg  237 (239)
T TIGR01831       177 IAPGLIDTEMLAEVEHDLD--EALKTVPMNRMGQPAEVASLAGFLMSDGASYVTRQVISVNGG  237 (239)
T ss_pred             EEEccCccccchhhhHHHH--HHHhcCCCCCCCCHHHHHHHHHHHcCchhcCccCCEEEecCC
Confidence            9999999999775433211  112223556788999999999965443 23556776655544

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.91  E-value=3.9e-23  Score=170.36  Aligned_cols=187  Identities=25%  Similarity=0.269  Sum_probs=147.4

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.+|+++.+++.++++++.+      .++++|++|||||...  +..+.+.+++++++++|+.+++.+++.+++
T Consensus        54 ~~~~~~~~~Dl~~~~~~~~~~~~~~~------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  127 (245)
T PRK12937         54 GGRAIAVQADVADAAAVTRLFDAAET------AFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAAR  127 (245)
T ss_pred             CCeEEEEECCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHH
Confidence            35789999999999999999999998      6689999999999863  345667888999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|+.   .++||++||..+.                    .+.+....|+.+|++++.++++++.++.   ..+++++.+
T Consensus       128 ~~~~---~~~iv~~ss~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~~a~~~~---~~~i~v~~i  181 (245)
T PRK12937        128 HLGQ---GGRIINLSTSVIA--------------------LPLPGYGPYAASKAAVEGLVHVLANELR---GRGITVNAV  181 (245)
T ss_pred             Hhcc---CcEEEEEeecccc--------------------CCCCCCchhHHHHHHHHHHHHHHHHHhh---hcCeEEEEE
Confidence            9865   5799999997752                    3456677899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCC
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKG  228 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g  228 (266)
                      +||+++|++..+..............++++..+|+++++.+++++... ...+|.++..++|
T Consensus       182 ~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g  243 (245)
T PRK12937        182 APGPVATELFFNGKSAEQIDQLAGLAPLERLGTPEEIAAAVAFLAGPDGAWVNGQVLRVNGG  243 (245)
T ss_pred             EeCCccCchhcccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccccEEEeCCC
Confidence            999999998643222111222222234556779999999998554322 2346777766544

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2.4e-23  Score=174.53  Aligned_cols=185  Identities=17%  Similarity=0.237  Sum_probs=147.0

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.+++.++++++.+      .++++|+||||||..  .+..+.+.+++++++++|+.+++.+++.++|
T Consensus        61 ~~~~~~~~~D~~~~~~i~~~~~~~~~------~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~  134 (273)
T PRK08278         61 GGQALPLVGDVRDEDQVAAAVAKAVE------RFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLP  134 (273)
T ss_pred             CCceEEEEecCCCHHHHHHHHHHHHH------HhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHH
Confidence            34688999999999999999999988      568899999999985  3455667888999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++++ .++|++++|..+..                  ....++...|+.+|++++.++++++.++.   +++|+|++|
T Consensus       135 ~~~~~~-~g~iv~iss~~~~~------------------~~~~~~~~~Y~~sK~a~~~~~~~la~el~---~~~I~v~~i  192 (273)
T PRK08278        135 HLKKSE-NPHILTLSPPLNLD------------------PKWFAPHTAYTMAKYGMSLCTLGLAEEFR---DDGIAVNAL  192 (273)
T ss_pred             HHHhcC-CCEEEEECCchhcc------------------ccccCCcchhHHHHHHHHHHHHHHHHHhh---hcCcEEEEE
Confidence            998876 78999999976421                  11125667899999999999999999997   789999999


Q ss_pred             cCC-cccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCcccc
Q 024553          168 DPG-VVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  232 (266)
Q Consensus       168 ~PG-~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~~  232 (266)
                      +|| ++.|+..++.....        .+.++..+|+++|+.+++++..+ ...+|.++.  +++...
T Consensus       193 ~Pg~~i~t~~~~~~~~~~--------~~~~~~~~p~~va~~~~~l~~~~~~~~~G~~~~--~~~~~~  249 (273)
T PRK08278        193 WPRTTIATAAVRNLLGGD--------EAMRRSRTPEIMADAAYEILSRPAREFTGNFLI--DEEVLR  249 (273)
T ss_pred             eCCCccccHHHHhccccc--------ccccccCCHHHHHHHHHHHhcCccccceeEEEe--ccchhh
Confidence            999 68888655432211        12234569999999999765443 356888886  444443

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.91  E-value=2.1e-23  Score=174.22  Aligned_cols=186  Identities=22%  Similarity=0.251  Sum_probs=146.2

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCC-----------CCcCCCcccchhhhhhhhhHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT-----------SSRLTPEGYDQMMSTNYIGAF   79 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~-----------~~~~~~~~~~~~~~~n~~~~~   79 (266)
                      .++.++.+|+++.++++++++++.+      .++++|++|||||...+           ..+.+.++|++++++|+.+++
T Consensus        49 ~~~~~~~~D~~~~~~~~~~~~~~~~------~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~  122 (266)
T PRK06171         49 ENYQFVPTDVSSAEEVNHTVAEIIE------KFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVF  122 (266)
T ss_pred             CceEEEEccCCCHHHHHHHHHHHHH------HcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHH
Confidence            3578899999999999999999988      67899999999997532           134678899999999999999


Q ss_pred             HHHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCC
Q 024553           80 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKS  159 (266)
Q Consensus        80 ~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~  159 (266)
                      .+++.+.++|++++ .++||++||..+.                    .+.+....|+.+|+++..++++++.++.   +
T Consensus       123 ~l~~~~~~~~~~~~-~g~iv~isS~~~~--------------------~~~~~~~~Y~~sK~a~~~l~~~la~e~~---~  178 (266)
T PRK06171        123 LMSQAVARQMVKQH-DGVIVNMSSEAGL--------------------EGSEGQSCYAATKAALNSFTRSWAKELG---K  178 (266)
T ss_pred             HHHHHHHHHHHhcC-CcEEEEEcccccc--------------------CCCCCCchhHHHHHHHHHHHHHHHHHhh---h
Confidence            99999999998766 6899999998863                    2445667899999999999999999997   7


Q ss_pred             CCeEEEEecCCccc-CCccCcchh----------HHHH-HHHHH--HHHhhcCCCHHHHHHHHHHHhcCCC---Ccccce
Q 024553          160 RHVSVIAADPGVVK-TNIMREVPS----------FLSL-MAFTV--LKLLGLLQSPEKGINSVLDAALAPP---ETSGVY  222 (266)
Q Consensus       160 ~~i~v~~v~PG~v~-T~~~~~~~~----------~~~~-~~~~~--~~~~~~~~~p~~~a~~~~~~~~~~~---~~~G~~  222 (266)
                      .+|+||.|+||+++ |++......          .... .....  ..+++++.+|+|+|+++.  ++.++   ..+|..
T Consensus       179 ~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~--fl~s~~~~~itG~~  256 (266)
T PRK06171        179 HNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSGKLSEVADLVC--YLLSDRASYITGVT  256 (266)
T ss_pred             cCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccCCCCCCHHHhhhhee--eeeccccccceeeE
Confidence            89999999999997 665432111          0111 11111  346678889999999999  44443   346777


Q ss_pred             eecCCC
Q 024553          223 FFGGKG  228 (266)
Q Consensus       223 ~~~~~g  228 (266)
                      +..++|
T Consensus       257 i~vdgg  262 (266)
T PRK06171        257 TNIAGG  262 (266)
T ss_pred             EEecCc
Confidence            766655

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=4.6e-23  Score=171.23  Aligned_cols=184  Identities=20%  Similarity=0.198  Sum_probs=146.9

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .+++++.||+++.+++..+++++.+      .++++|++|||||+..  +..+.+.+++++.+++|+.+++.+++.+++.
T Consensus        67 ~~~~~~~~D~~~~~~~~~~~~~~~~------~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  140 (256)
T PRK12748         67 VRCEHMEIDLSQPYAPNRVFYAVSE------RLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQ  140 (256)
T ss_pred             CeEEEEECCCCCHHHHHHHHHHHHH------hCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            4689999999999999999999998      6789999999999863  4556678889999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |.++. .++||++||..+.                    .+.+....|+.+|++++.++++++.++.   ..+|+|++++
T Consensus       141 ~~~~~-~~~iv~~ss~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~~i~v~~i~  196 (256)
T PRK12748        141 YDGKA-GGRIINLTSGQSL--------------------GPMPDELAYAATKGAIEAFTKSLAPELA---EKGITVNAVN  196 (256)
T ss_pred             hhhcC-CeEEEEECCcccc--------------------CCCCCchHHHHHHHHHHHHHHHHHHHHH---HhCeEEEEEE
Confidence            97655 6899999998752                    2445567899999999999999999997   7899999999


Q ss_pred             CCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCC
Q 024553          169 PGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKG  228 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g  228 (266)
                      ||+++|++......    .......+.+++.+|+++|+.+.+++... ...+|.++..++|
T Consensus       197 Pg~~~t~~~~~~~~----~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g  253 (256)
T PRK12748        197 PGPTDTGWITEELK----HHLVPKFPQGRVGEPVDAARLIAFLVSEEAKWITGQVIHSEGG  253 (256)
T ss_pred             eCcccCCCCChhHH----HhhhccCCCCCCcCHHHHHHHHHHHhCcccccccCCEEEecCC
Confidence            99999987543111    00111123345679999999998644332 3457888876655

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.91  E-value=6.2e-23  Score=170.64  Aligned_cols=191  Identities=18%  Similarity=0.177  Sum_probs=148.4

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.||+++.+++..+++++.+      .++++|++|||||...  +..+.+.++|++++++|+.+++.+++.+++.
T Consensus        53 ~~~~~~~~D~~~~~~i~~~~~~~~~------~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  126 (259)
T PRK12384         53 GMAYGFGADATSEQSVLALSRGVDE------IFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRL  126 (259)
T ss_pred             ceeEEEEccCCCHHHHHHHHHHHHH------HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHH
Confidence            5689999999999999999999988      6689999999999763  3456778899999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |++++..++||++||..+.                    .+.+...+|+.+|+++..++++++.++.   +.+|+|+++.
T Consensus       127 l~~~~~~~~iv~~ss~~~~--------------------~~~~~~~~Y~~sKaa~~~l~~~la~e~~---~~gi~v~~v~  183 (259)
T PRK12384        127 MIRDGIQGRIIQINSKSGK--------------------VGSKHNSGYSAAKFGGVGLTQSLALDLA---EYGITVHSLM  183 (259)
T ss_pred             HHhCCCCcEEEEecCcccc--------------------cCCCCCchhHHHHHHHHHHHHHHHHHHH---HcCcEEEEEe
Confidence            9875435799999997752                    2344557899999999999999999997   7899999999


Q ss_pred             CCcc-cCCccCcchhH----------HHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCcc
Q 024553          169 PGVV-KTNIMREVPSF----------LSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  230 (266)
Q Consensus       169 PG~v-~T~~~~~~~~~----------~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~  230 (266)
                      ||.+ .|++.....+.          .....+....+++++..|+|+++.+++++... ...+|..+..++|+.
T Consensus       184 pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g~~  257 (259)
T PRK12384        184 LGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGGQV  257 (259)
T ss_pred             cCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHHHHHcCcccccccCceEEEcCCEE
Confidence            9975 66665432211          11111222335567789999999999554322 234688777677664

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2.1e-23  Score=175.04  Aligned_cols=176  Identities=18%  Similarity=0.198  Sum_probs=141.2

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.+++.++++++.+      .++++|+||||||+.  .+..+.+.++|++++++|+.|++.+++.++|
T Consensus        54 ~~~~~~~~~Dv~d~~~v~~~~~~~~~------~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p  127 (275)
T PRK05876         54 GFDVHGVMCDVRHREEVTHLADEAFR------LLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLP  127 (275)
T ss_pred             CCeEEEEeCCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            34688999999999999999999988      678999999999986  3556778899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|.+++.+|+||++||..+..                    +.++...|+.+|+++..++++++.++.   ..+|++++|
T Consensus       128 ~m~~~~~~g~iv~isS~~~~~--------------------~~~~~~~Y~asK~a~~~~~~~l~~e~~---~~gi~v~~v  184 (275)
T PRK05876        128 RLLEQGTGGHVVFTASFAGLV--------------------PNAGLGAYGVAKYGVVGLAETLAREVT---ADGIGVSVL  184 (275)
T ss_pred             HHHhcCCCCEEEEeCChhhcc--------------------CCCCCchHHHHHHHHHHHHHHHHHHhh---hcCcEEEEE
Confidence            998765468999999988632                    456677899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHH--HH------HHHHHHHhhcCCCHHHHHHHHHHHhcC
Q 024553          168 DPGVVKTNIMREVPSFLS--LM------AFTVLKLLGLLQSPEKGINSVLDAALA  214 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~--~~------~~~~~~~~~~~~~p~~~a~~~~~~~~~  214 (266)
                      +||+++|++..+......  ..      ..........+.+|+++|+.++.++..
T Consensus       185 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~~  239 (275)
T PRK05876        185 CPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILA  239 (275)
T ss_pred             EeCccccccccchhhhcCccccccccccccccccccccCCCHHHHHHHHHHHHHc
Confidence            999999998755321100  00      000011112356999999999977654

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.91  E-value=5.9e-23  Score=169.67  Aligned_cols=190  Identities=23%  Similarity=0.254  Sum_probs=146.1

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC---CCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      +.++.++.||+++.+++.++++++.+      .++++|++|||||...   +..+.+.++++.++++|+.+++.+++.++
T Consensus        51 ~~~~~~~~~Dl~~~~~~~~~~~~~~~------~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  124 (248)
T PRK06947         51 GGRACVVAGDVANEADVIAMFDAVQS------AFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAA  124 (248)
T ss_pred             CCcEEEEEeccCCHHHHHHHHHHHHH------hcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHH
Confidence            34689999999999999999999988      5688999999999863   34566788999999999999999999999


Q ss_pred             HHHhcCC--CCCeEEEEcCCcccccccccCCccccccCcccCCCCCC-hhhcchHhHHHHHHHHHHHHHhhCCCCCCCeE
Q 024553           87 PLLKNSP--VPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYP-CARIYEYSKLCLLIFSYELHRNLGLDKSRHVS  163 (266)
Q Consensus        87 ~~l~~~~--~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~  163 (266)
                      +.+..++  ..++||++||..+..                    +.+ ....|+.+|+++..++++++.++.   +.+|+
T Consensus       125 ~~~~~~~~~~~~~ii~~sS~~~~~--------------------~~~~~~~~Y~~sK~~~~~~~~~la~~~~---~~~i~  181 (248)
T PRK06947        125 RRLSTDRGGRGGAIVNVSSIASRL--------------------GSPNEYVDYAGSKGAVDTLTLGLAKELG---PHGVR  181 (248)
T ss_pred             HHHHhcCCCCCcEEEEECchhhcC--------------------CCCCCCcccHhhHHHHHHHHHHHHHHhh---hhCcE
Confidence            9886542  247899999987632                    122 235799999999999999999997   78999


Q ss_pred             EEEecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCC
Q 024553          164 VIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKG  228 (266)
Q Consensus       164 v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g  228 (266)
                      |+.++||+++|++.................+.++..+|+++|+.+++++..+ ...+|.++..++|
T Consensus       182 v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~l~~~~~~~~~G~~~~~~gg  247 (248)
T PRK06947        182 VNAVRPGLIETEIHASGGQPGRAARLGAQTPLGRAGEADEVAETIVWLLSDAASYVTGALLDVGGG  247 (248)
T ss_pred             EEEEeccCcccccccccCCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCccccCcCCceEeeCCC
Confidence            9999999999998643111111111112223455679999999999754432 2468998877665

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.91  E-value=4.4e-23  Score=170.24  Aligned_cols=188  Identities=21%  Similarity=0.245  Sum_probs=149.6

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.+++.++++++.+      ..+++|++|||||...  +..+.+.++|++++++|+.+++.+++.+++
T Consensus        52 ~~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  125 (246)
T PRK12938         52 GFDFIASEGNVGDWDSTKAAFDKVKA------EVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVID  125 (246)
T ss_pred             CCcEEEEEcCCCCHHHHHHHHHHHHH------HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            44688899999999999999999988      5689999999999863  355678889999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++++ .++||++||..+.                    .+.++...|+.+|+++..++++++.++.   ..+|++++|
T Consensus       126 ~~~~~~-~~~iv~isS~~~~--------------------~~~~~~~~y~~sK~a~~~~~~~l~~~~~---~~gi~v~~i  181 (246)
T PRK12938        126 GMVERG-WGRIINISSVNGQ--------------------KGQFGQTNYSTAKAGIHGFTMSLAQEVA---TKGVTVNTV  181 (246)
T ss_pred             HHHHcC-CeEEEEEechhcc--------------------CCCCCChhHHHHHHHHHHHHHHHHHHhh---hhCeEEEEE
Confidence            998765 6899999998762                    3455677899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCC
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKG  228 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g  228 (266)
                      +||++.|++.....+.. ........+.+++.+|+++++.+++++.. +...+|..+..++|
T Consensus       182 ~pg~~~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~g~~~~~~~g  242 (246)
T PRK12938        182 SPGYIGTDMVKAIRPDV-LEKIVATIPVRRLGSPDEIGSIVAWLASEESGFSTGADFSLNGG  242 (246)
T ss_pred             EecccCCchhhhcChHH-HHHHHhcCCccCCcCHHHHHHHHHHHcCcccCCccCcEEEECCc
Confidence            99999999876543221 11111112344567999999999954432 23457777766554

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.91  E-value=6.2e-23  Score=169.42  Aligned_cols=187  Identities=20%  Similarity=0.265  Sum_probs=148.0

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCC--CCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.||+++.+++.++++++.+      .++++|++|||||...+  ..+.+.+++++++++|+.+++.+++.++|.
T Consensus        56 ~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  129 (247)
T PRK12935         56 HDVYAVQADVSKVEDANRLVEEAVN------HFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPY  129 (247)
T ss_pred             CeEEEEECCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            4689999999999999999999998      67899999999998643  345677899999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |.+.+ .++||++||..+..                    +.++...|+.+|++++.++++++.++.   +.+|+++.++
T Consensus       130 ~~~~~-~~~iv~~sS~~~~~--------------------~~~~~~~Y~~sK~a~~~~~~~l~~~~~---~~~i~v~~v~  185 (247)
T PRK12935        130 ITEAE-EGRIISISSIIGQA--------------------GGFGQTNYSAAKAGMLGFTKSLALELA---KTNVTVNAIC  185 (247)
T ss_pred             HHHcC-CcEEEEEcchhhcC--------------------CCCCCcchHHHHHHHHHHHHHHHHHHH---HcCcEEEEEE
Confidence            98766 68999999987632                    334567899999999999999999997   7899999999


Q ss_pred             CCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCC
Q 024553          169 PGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKG  228 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g  228 (266)
                      ||+++|++....+...... .......+.+.+|+++++.+++++..+...+|.-+..++|
T Consensus       186 pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~edva~~~~~~~~~~~~~~g~~~~i~~g  244 (247)
T PRK12935        186 PGFIDTEMVAEVPEEVRQK-IVAKIPKKRFGQADEIAKGVVYLCRDGAYITGQQLNINGG  244 (247)
T ss_pred             eCCCcChhhhhccHHHHHH-HHHhCCCCCCcCHHHHHHHHHHHcCcccCccCCEEEeCCC
Confidence            9999998866544322111 1112223457799999999996553332346666665555

>PRK05717 oxidoreductase; Validated

Probab=99.90  E-value=9e-23  Score=169.36  Aligned_cols=187  Identities=21%  Similarity=0.176  Sum_probs=143.9

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC----CCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA----TSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      .++.++.+|+++.+++.++++++.+      .++++|++|||||...    +..+.+.++|++++++|+.+++.+++.+.
T Consensus        56 ~~~~~~~~Dl~~~~~~~~~~~~~~~------~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  129 (255)
T PRK05717         56 ENAWFIAMDVADEAQVAAGVAEVLG------QFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCA  129 (255)
T ss_pred             CceEEEEccCCCHHHHHHHHHHHHH------HhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            4688999999999999999999988      6689999999999863    23456778899999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |+|++.  .++||++||..+.                    .+.+....|+++|++++.++++++.++.    .+|+|+.
T Consensus       130 ~~~~~~--~g~ii~~sS~~~~--------------------~~~~~~~~Y~~sKaa~~~~~~~la~~~~----~~i~v~~  183 (255)
T PRK05717        130 PYLRAH--NGAIVNLASTRAR--------------------QSEPDTEAYAASKGGLLALTHALAISLG----PEIRVNA  183 (255)
T ss_pred             HHHHHc--CcEEEEEcchhhc--------------------CCCCCCcchHHHHHHHHHHHHHHHHHhc----CCCEEEE
Confidence            999764  4799999998763                    2344567899999999999999999985    4699999


Q ss_pred             ecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          167 ADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      ++||+++|++.................+.+++.+|+++|..+++++... ...+|..+..++|.
T Consensus       184 i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg~  247 (255)
T PRK05717        184 VSPGWIDARDPSQRRAEPLSEADHAQHPAGRVGTVEDVAAMVAWLLSRQAGFVTGQEFVVDGGM  247 (255)
T ss_pred             EecccCcCCccccccchHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCchhcCccCcEEEECCCc
Confidence            9999999987543211110111111234567789999999998544221 23467766655553

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.90  E-value=8.5e-23  Score=169.55  Aligned_cols=190  Identities=18%  Similarity=0.219  Sum_probs=151.4

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.+++.++++++..      .++++|++|||||...  +..+.+.++|++.+++|+.+++.+++.+++
T Consensus        59 ~~~~~~~~~Dl~~~~~~~~~~~~~~~------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  132 (256)
T PRK06124         59 GGAAEALAFDIADEEAVAAAFARIDA------EHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQ  132 (256)
T ss_pred             CCceEEEEccCCCHHHHHHHHHHHHH------hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            34688999999999999999999988      6789999999999863  455677889999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|.+++ .++||++||..+.                    .+.++...|+.+|+++..++++++.++.   ..+|++++|
T Consensus       133 ~~~~~~-~~~iv~~ss~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~~i~v~~i  188 (256)
T PRK06124        133 RMKRQG-YGRIIAITSIAGQ--------------------VARAGDAVYPAAKQGLTGLMRALAAEFG---PHGITSNAI  188 (256)
T ss_pred             HHHhcC-CcEEEEEeechhc--------------------cCCCCccHhHHHHHHHHHHHHHHHHHHH---HhCcEEEEE
Confidence            998776 7899999998763                    3556678899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHH-HHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          168 DPGVVKTNIMREVPSFLSL-MAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      +||+++|++.......... .......+.+++.+|+++++.+++++... ...+|.++..++|.
T Consensus       189 ~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~i~~dgg~  252 (256)
T PRK06124        189 APGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFLASPAASYVNGHVLAVDGGY  252 (256)
T ss_pred             EECCccCcchhhhccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCcCCCEEEECCCc
Confidence            9999999985432111111 11112224456779999999999654332 24578887766654

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.90  E-value=1.1e-22  Score=168.49  Aligned_cols=190  Identities=23%  Similarity=0.239  Sum_probs=150.2

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++++|+++.+++.++++++.+      .++++|++|||||...  +..+.+.+++++++++|+.+++.+++.+++
T Consensus        47 ~~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  120 (252)
T PRK08220         47 DYPFATFVLDVSDAAAVAQVCQRLLA------ETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMP  120 (252)
T ss_pred             CCceEEEEecCCCHHHHHHHHHHHHH------HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            34688999999999999999999988      6789999999999863  455667889999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++++ .++||++||..+.                    .+.+....|+.+|+++..++++++.++.   +.+|+|+.+
T Consensus       121 ~~~~~~-~g~iv~~ss~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~~i~v~~i  176 (252)
T PRK08220        121 QFRRQR-SGAIVTVGSNAAH--------------------VPRIGMAAYGASKAALTSLAKCVGLELA---PYGVRCNVV  176 (252)
T ss_pred             HHHhCC-CCEEEEECCchhc--------------------cCCCCCchhHHHHHHHHHHHHHHHHHhh---HhCeEEEEE
Confidence            998766 6899999998752                    2445567899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHH---------HHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          168 DPGVVKTNIMREVPSFLS---------LMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~---------~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      .||++.|++.........         ........+++++.+|+++|+++++++... ...+|..+..++|.
T Consensus       177 ~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~i~~~gg~  248 (252)
T PRK08220        177 SPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLFLASDLASHITLQDIVVDGGA  248 (252)
T ss_pred             ecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHHHHHHhcchhcCccCcEEEECCCe
Confidence            999999998654311100         011111224556789999999999655432 35577776666664

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.90  E-value=4.3e-23  Score=169.96  Aligned_cols=195  Identities=23%  Similarity=0.243  Sum_probs=137.9

Q ss_pred             EEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcC
Q 024553           13 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS   92 (266)
Q Consensus        13 ~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~   92 (266)
                      ..++.||+++.++++++++++.         +++|+||||||+..      .+++++++++|+.+++.+++.++|+|++ 
T Consensus        25 ~~~~~~Dl~~~~~v~~~~~~~~---------~~iD~li~nAG~~~------~~~~~~~~~vN~~~~~~l~~~~~~~~~~-   88 (241)
T PRK12428         25 DGFIQADLGDPASIDAAVAALP---------GRIDALFNIAGVPG------TAPVELVARVNFLGLRHLTEALLPRMAP-   88 (241)
T ss_pred             hHhhcccCCCHHHHHHHHHHhc---------CCCeEEEECCCCCC------CCCHHHhhhhchHHHHHHHHHHHHhccC-
Confidence            3578999999999999988763         47999999999852      2468999999999999999999999965 


Q ss_pred             CCCCeEEEEcCCcccccccccCCc-------cccc-cCcccCCCCCChhhcchHhHHHHHHHHHHHH-HhhCCCCCCCeE
Q 024553           93 PVPSRIVNVTSFTHRNVFNAQVNN-------ETIT-GKFFLRSKCYPCARIYEYSKLCLLIFSYELH-RNLGLDKSRHVS  163 (266)
Q Consensus        93 ~~~~~iv~vsS~~~~~~~~~~~~~-------~~~~-~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la-~~~~~~~~~~i~  163 (266)
                        .++||++||.+++.... ....       .... +.......+.++...|+.+|+++..+++.++ .++.   +.+|+
T Consensus        89 --~g~Iv~isS~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~e~~---~~gir  162 (241)
T PRK12428         89 --GGAIVNVASLAGAEWPQ-RLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQAQPWFG---ARGIR  162 (241)
T ss_pred             --CcEEEEeCcHHhhcccc-chHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHHHHHHHHhhh---ccCeE
Confidence              47999999988753110 0000       0000 0000001245667889999999999999999 8887   78999


Q ss_pred             EEEecCCcccCCccCcchhHHH-HHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCc
Q 024553          164 VIAADPGVVKTNIMREVPSFLS-LMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  229 (266)
Q Consensus       164 v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~  229 (266)
                      ||+|+||+++|++......... ........+++++.+|+++|+.+++++.. +...+|..+..++|.
T Consensus       163 vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~l~s~~~~~~~G~~i~vdgg~  230 (241)
T PRK12428        163 VNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAVLVFLCSDAARWINGVNLPVDGGL  230 (241)
T ss_pred             EEEeecCCccCcccccchhhhhhHhhhhcccccCCCCCHHHHHHHHHHHcChhhcCccCcEEEecCch
Confidence            9999999999998765322110 00011123556778999999999964421 123567776666654

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.9e-22  Score=169.27  Aligned_cols=190  Identities=19%  Similarity=0.295  Sum_probs=149.1

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      ..+.++.+|+++.+++.++++++.+      ..+++|++|||||...  +..+.+.+++++++++|+.+++.+++.++|.
T Consensus        49 ~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  122 (275)
T PRK08263         49 DRLLPLALDVTDRAAVFAAVETAVE------HFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPY  122 (275)
T ss_pred             CCeeEEEccCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            4688999999999999999999988      6689999999999873  4556788899999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |++++ .++||++||..+..                    +.+....|+.+|+++..+++.++.++.   +.+|+++.+.
T Consensus       123 ~~~~~-~~~iv~vsS~~~~~--------------------~~~~~~~Y~~sKaa~~~~~~~la~e~~---~~gi~v~~v~  178 (275)
T PRK08263        123 LREQR-SGHIIQISSIGGIS--------------------AFPMSGIYHASKWALEGMSEALAQEVA---EFGIKVTLVE  178 (275)
T ss_pred             HHhcC-CCEEEEEcChhhcC--------------------CCCCccHHHHHHHHHHHHHHHHHHHhh---hhCcEEEEEe
Confidence            98876 68999999987632                    445567899999999999999999997   7899999999


Q ss_pred             CCcccCCccCcch-------hHHHH-HHHHHHHHhhcC-CCHHHHHHHHHHHhcCCCCcccceeecCCCccc
Q 024553          169 PGVVKTNIMREVP-------SFLSL-MAFTVLKLLGLL-QSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  231 (266)
Q Consensus       169 PG~v~T~~~~~~~-------~~~~~-~~~~~~~~~~~~-~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~  231 (266)
                      ||++.|++.....       ..... .......+.+.+ .+|+++|+.++.++. .+...+.|+.......+
T Consensus       179 Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l~~-~~~~~~~~~~~~~~~~~  249 (275)
T PRK08263        179 PGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAAEALLKLVD-AENPPLRLFLGSGVLDL  249 (275)
T ss_pred             cCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHHHHHHHHHc-CCCCCeEEEeCchHHHH
Confidence            9999999874210       00111 111222234456 799999999996544 44556778874443333

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.4e-22  Score=167.41  Aligned_cols=189  Identities=21%  Similarity=0.234  Sum_probs=145.4

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC---CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      .++.++.||+++.+++.++++++.+      .++++|++|||||...   +..+.+.++|++++++|+.+++.+++.+++
T Consensus        52 ~~~~~~~~Dl~~~~~~~~~~~~~~~------~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  125 (248)
T PRK06123         52 GEALAVAADVADEADVLRLFEAVDR------ELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVK  125 (248)
T ss_pred             CcEEEEEeccCCHHHHHHHHHHHHH------HhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            4688999999999999999999988      6689999999999863   344667889999999999999999999999


Q ss_pred             HHhcCC--CCCeEEEEcCCcccccccccCCccccccCcccCCCCCCh-hhcchHhHHHHHHHHHHHHHhhCCCCCCCeEE
Q 024553           88 LLKNSP--VPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPC-ARIYEYSKLCLLIFSYELHRNLGLDKSRHVSV  164 (266)
Q Consensus        88 ~l~~~~--~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v  164 (266)
                      .|+++.  .+++||++||..+..                    +.+. ...|+.+|++++.++++++.++.   +++|++
T Consensus       126 ~~~~~~~~~~g~iv~~sS~~~~~--------------------~~~~~~~~Y~~sKaa~~~~~~~la~~~~---~~~i~v  182 (248)
T PRK06123        126 RMSTRHGGRGGAIVNVSSMAARL--------------------GSPGEYIDYAASKGAIDTMTIGLAKEVA---AEGIRV  182 (248)
T ss_pred             HHHhcCCCCCeEEEEECchhhcC--------------------CCCCCccchHHHHHHHHHHHHHHHHHhc---ccCeEE
Confidence            997542  247899999987532                    2222 24699999999999999999997   789999


Q ss_pred             EEecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCC
Q 024553          165 IAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKG  228 (266)
Q Consensus       165 ~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g  228 (266)
                      +.+.||.+.|++.................++++..+|+++++.+++++... ...+|..+..++|
T Consensus       183 ~~i~pg~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~gg  247 (248)
T PRK06123        183 NAVRPGVIYTEIHASGGEPGRVDRVKAGIPMGRGGTAEEVARAILWLLSDEASYTTGTFIDVSGG  247 (248)
T ss_pred             EEEecCcccCchhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEeecCC
Confidence            999999999997543211111111122234556679999999999654322 2457888876554

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.3e-22  Score=167.76  Aligned_cols=188  Identities=24%  Similarity=0.256  Sum_probs=147.9

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC-----CCCcCCCcccchhhhhhhhhHHHHHHhh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA-----TSSRLTPEGYDQMMSTNYIGAFFLTKLL   85 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~-----~~~~~~~~~~~~~~~~n~~~~~~l~~~~   85 (266)
                      .++.++.+|+++.++++++++++.+      ..+++|+||||||...     +..+.+.+.+++++++|+.+++.+++.+
T Consensus        55 ~~~~~~~~Dl~~~~~~~~~~~~~~~------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~  128 (250)
T PRK07774         55 GTAIAVQVDVSDPDSAKAMADATVS------AFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAV  128 (250)
T ss_pred             CcEEEEEcCCCCHHHHHHHHHHHHH------HhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHH
Confidence            3678899999999999999999988      5678999999999863     2345677889999999999999999999


Q ss_pred             HHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEE
Q 024553           86 LPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVI  165 (266)
Q Consensus        86 ~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~  165 (266)
                      ++.|.+.+ .++||++||..+                       +.+...|+.+|++++.+++++++++.   ..+|+++
T Consensus       129 ~~~~~~~~-~~~iv~~sS~~~-----------------------~~~~~~Y~~sK~a~~~~~~~l~~~~~---~~~i~v~  181 (250)
T PRK07774        129 YKHMAKRG-GGAIVNQSSTAA-----------------------WLYSNFYGLAKVGLNGLTQQLARELG---GMNIRVN  181 (250)
T ss_pred             HHHHHHhC-CcEEEEEecccc-----------------------cCCccccHHHHHHHHHHHHHHHHHhC---ccCeEEE
Confidence            99998766 689999999875                       22346799999999999999999997   7899999


Q ss_pred             EecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCccc
Q 024553          166 AADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  231 (266)
Q Consensus       166 ~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~  231 (266)
                      .++||.+.|++.....+...........+...+.+|+++++.++.++... +..+|..|..++|+.+
T Consensus       182 ~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~g~~~  248 (250)
T PRK07774        182 AIAPGPIDTEATRTVTPKEFVADMVKGIPLSRMGTPEDLVGMCLFLLSDEASWITGQIFNVDGGQII  248 (250)
T ss_pred             EEecCcccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhhCcCCCEEEECCCeec
Confidence            99999999998765433221111111112334568999999998654433 2357888887777654

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.90  E-value=1.2e-22  Score=167.94  Aligned_cols=190  Identities=24%  Similarity=0.279  Sum_probs=151.6

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC---CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      .++.++.||+++.+++.++++++.+      .++++|++|||||...   +..+.+.+++++.+++|+.+++.+++.+++
T Consensus        53 ~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  126 (251)
T PRK07231         53 GRAIAVAADVSDEADVEAAVAAALE------RFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVP  126 (251)
T ss_pred             CeEEEEECCCCCHHHHHHHHHHHHH------HhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            4588999999999999999999987      5689999999999752   345678889999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|.++. .++||++||..+.                    .+.++...|+.+|.++..+++.++.++.   +.+|+++++
T Consensus       127 ~~~~~~-~~~iv~~sS~~~~--------------------~~~~~~~~y~~sk~~~~~~~~~~a~~~~---~~~i~v~~i  182 (251)
T PRK07231        127 AMRGEG-GGAIVNVASTAGL--------------------RPRPGLGWYNASKGAVITLTKALAAELG---PDKIRVNAV  182 (251)
T ss_pred             HHHhcC-CcEEEEEcChhhc--------------------CCCCCchHHHHHHHHHHHHHHHHHHHhh---hhCeEEEEE
Confidence            998766 7899999998763                    2455667899999999999999999997   679999999


Q ss_pred             cCCcccCCccCcchhH---HHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCcc
Q 024553          168 DPGVVKTNIMREVPSF---LSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  230 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~---~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~  230 (266)
                      +||++.|++.......   .....+....+.+++.+|+++|+++++++..+ ...+|.++..++|..
T Consensus       183 ~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~~  249 (251)
T PRK07231        183 APVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFLASDEASWITGVTLVVDGGRC  249 (251)
T ss_pred             EECccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccCCCCCeEEECCCcc
Confidence            9999999987654321   11111111223455679999999999766433 245688877776653

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.6e-22  Score=168.04  Aligned_cols=189  Identities=20%  Similarity=0.264  Sum_probs=148.2

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.+|+++.++++++++++.+      ..+++|++|||||...  +..+.+.++|+.++++|+.+++.+++.+++.
T Consensus        58 ~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  131 (258)
T PRK06949         58 GAAHVVSLDVTDYQSIKAAVAHAET------EAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKR  131 (258)
T ss_pred             CcEEEEEecCCCHHHHHHHHHHHHH------hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHH
Confidence            4688999999999999999999988      6689999999999753  3445667889999999999999999999999


Q ss_pred             HhcCCC-------CCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCC
Q 024553           89 LKNSPV-------PSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRH  161 (266)
Q Consensus        89 l~~~~~-------~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~  161 (266)
                      |..+..       .++||+++|..+.                    .+.+...+|+.+|+++..++++++.++.   +.+
T Consensus       132 ~~~~~~~~~~~~~~g~iv~~sS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~~~~---~~~  188 (258)
T PRK06949        132 MIARAKGAGNTKPGGRIINIASVAGL--------------------RVLPQIGLYCMSKAAVVHMTRAMALEWG---RHG  188 (258)
T ss_pred             HHhcCCcCCCCCCCeEEEEECccccc--------------------CCCCCccHHHHHHHHHHHHHHHHHHHHH---hcC
Confidence            875531       4799999998763                    2445567899999999999999999997   789


Q ss_pred             eEEEEecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCC
Q 024553          162 VSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKG  228 (266)
Q Consensus       162 i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g  228 (266)
                      |++++|+||+|+|++....+............+.+++..|+++++.+++++-. +...+|.++..++|
T Consensus       189 i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~G~~i~~dgg  256 (258)
T PRK06949        189 INVNAICPGYIDTEINHHHWETEQGQKLVSMLPRKRVGKPEDLDGLLLLLAADESQFINGAIISADDG  256 (258)
T ss_pred             eEEEEEeeCCCcCCcchhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcCCCCcEEEeCCC
Confidence            99999999999999876543222111111222445778999999999954432 23567888766554

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.8e-22  Score=166.73  Aligned_cols=189  Identities=29%  Similarity=0.326  Sum_probs=151.5

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.+|+++.++++++++++.+      .++++|++|||||...  +..+.+.+++++++++|+.+++.+++.+.++
T Consensus        56 ~~~~~~~~Dl~~~~~~~~~~~~~~~------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  129 (250)
T PRK12939         56 GRAHAIAADLADPASVQRFFDAAAA------ALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPH  129 (250)
T ss_pred             CcEEEEEccCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            4689999999999999999999988      5688999999999863  3456678889999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      +.+++ .+++|++||..+.                    .+.+....|+.+|++++.+++.++.++.   ..+|++++|+
T Consensus       130 ~~~~~-~g~iv~isS~~~~--------------------~~~~~~~~y~~sK~~~~~~~~~l~~~~~---~~~i~v~~v~  185 (250)
T PRK12939        130 LRDSG-RGRIVNLASDTAL--------------------WGAPKLGAYVASKGAVIGMTRSLARELG---GRGITVNAIA  185 (250)
T ss_pred             HHHcC-CeEEEEECchhhc--------------------cCCCCcchHHHHHHHHHHHHHHHHHHHh---hhCEEEEEEE
Confidence            98866 7899999997763                    2445567899999999999999999997   7899999999


Q ss_pred             CCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          169 PGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      ||+++|++.................+..++.+|+++|+.+++++... +..+|.++..++|.
T Consensus       186 pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg~  247 (250)
T PRK12939        186 PGLTATEATAYVPADERHAYYLKGRALERLQVPDDVAGAVLFLLSDAARFVTGQLLPVNGGF  247 (250)
T ss_pred             ECCCCCccccccCChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCc
Confidence            99999998765432111111122234456789999999999765432 34578888776664

>PRK07069 short chain dehydrogenase; Validated

Probab=99.90  E-value=1.6e-22  Score=167.28  Aligned_cols=189  Identities=20%  Similarity=0.216  Sum_probs=144.5

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      .+.+++||+++.+++.++++++.+      .++++|++|||||...  +..+.+.+++++++++|+.+++.+++.+++.|
T Consensus        52 ~~~~~~~D~~~~~~~~~~~~~~~~------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~  125 (251)
T PRK07069         52 VAFAAVQDVTDEAQWQALLAQAAD------AMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYL  125 (251)
T ss_pred             eEEEEEeecCCHHHHHHHHHHHHH------HcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            466789999999999999999988      6789999999999863  34566788899999999999999999999999


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      ++.+ .++||++||..+..                    +.+....|+.+|+++..++++++.++.. ...+|+++.|+|
T Consensus       126 ~~~~-~~~ii~~ss~~~~~--------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~-~~~~i~v~~v~p  183 (251)
T PRK07069        126 RASQ-PASIVNISSVAAFK--------------------AEPDYTAYNASKAAVASLTKSIALDCAR-RGLDVRCNSIHP  183 (251)
T ss_pred             hhcC-CcEEEEecChhhcc--------------------CCCCCchhHHHHHHHHHHHHHHHHHhcc-cCCcEEEEEEee
Confidence            8876 78999999988632                    4455678999999999999999999862 023599999999


Q ss_pred             CcccCCccCcchhH----HHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCC
Q 024553          170 GVVKTNIMREVPSF----LSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKG  228 (266)
Q Consensus       170 G~v~T~~~~~~~~~----~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g  228 (266)
                      |+++|++.......    ..........+.+++.+|+++|+.+++++... ...+|..+..++|
T Consensus       184 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~~g  247 (251)
T PRK07069        184 TFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASDESRFVTGAELVIDGG  247 (251)
T ss_pred             cccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEECCC
Confidence            99999987543211    11111111123356679999999999643221 2446666555554

>PRK06182 short chain dehydrogenase; Validated

Probab=99.90  E-value=2e-22  Score=168.92  Aligned_cols=173  Identities=22%  Similarity=0.287  Sum_probs=139.1

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      .+.++.||+++.+++.++++++.+      .++++|+||||||+.  .+..+.+.++++.++++|+.+++.+++.++|.|
T Consensus        47 ~~~~~~~Dv~~~~~~~~~~~~~~~------~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~  120 (273)
T PRK06182         47 GVHPLSLDVTDEASIKAAVDTIIA------EEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHM  120 (273)
T ss_pred             CCeEEEeeCCCHHHHHHHHHHHHH------hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHH
Confidence            478899999999999999999988      668999999999986  345677889999999999999999999999999


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      ++.+ .++||++||..+..                    +.+....|+.+|++++.++++++.++.   +.+|++++|+|
T Consensus       121 ~~~~-~g~iv~isS~~~~~--------------------~~~~~~~Y~~sKaa~~~~~~~l~~e~~---~~gi~v~~v~P  176 (273)
T PRK06182        121 RAQR-SGRIINISSMGGKI--------------------YTPLGAWYHATKFALEGFSDALRLEVA---PFGIDVVVIEP  176 (273)
T ss_pred             HhcC-CCEEEEEcchhhcC--------------------CCCCccHhHHHHHHHHHHHHHHHHHhc---ccCCEEEEEec
Confidence            8876 78999999987532                    334456799999999999999999997   78999999999


Q ss_pred             CcccCCccCcchhH-----------HH----HHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Q 024553          170 GVVKTNIMREVPSF-----------LS----LMAFTVLKLLGLLQSPEKGINSVLDAALA  214 (266)
Q Consensus       170 G~v~T~~~~~~~~~-----------~~----~~~~~~~~~~~~~~~p~~~a~~~~~~~~~  214 (266)
                      |+++|++.......           ..    ...+....+.+++.+|+++|+.+++++..
T Consensus       177 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~~~~  236 (273)
T PRK06182        177 GGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVIADAISKAVTA  236 (273)
T ss_pred             CCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHHHhC
Confidence            99999975321110           00    00111122345677999999999976543

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.90  E-value=2.9e-22  Score=166.61  Aligned_cols=189  Identities=22%  Similarity=0.231  Sum_probs=148.1

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.+++.++++++.+      ..+++|+||||||...  +..+.+.+.+++++++|+.+++.+++.+.+
T Consensus        58 ~~~~~~~~~Dl~d~~~~~~~~~~~~~------~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  131 (258)
T PRK09134         58 GRRAVALQADLADEAEVRALVARASA------ALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFAR  131 (258)
T ss_pred             CCeEEEEEcCCCCHHHHHHHHHHHHH------HcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            34688999999999999999999988      5689999999999863  455677889999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .+++.. .++||+++|..+.                    .+.+....|+.+|++++.++++++.++.   . .|+++++
T Consensus       132 ~~~~~~-~~~iv~~~s~~~~--------------------~~~p~~~~Y~~sK~a~~~~~~~la~~~~---~-~i~v~~i  186 (258)
T PRK09134        132 ALPADA-RGLVVNMIDQRVW--------------------NLNPDFLSYTLSKAALWTATRTLAQALA---P-RIRVNAI  186 (258)
T ss_pred             HHHhcC-CceEEEECchhhc--------------------CCCCCchHHHHHHHHHHHHHHHHHHHhc---C-CcEEEEe
Confidence            998765 6899999886542                    2344456799999999999999999985   3 4999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCccccC
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNS  233 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~~  233 (266)
                      +||++.|+.......   +.......+.++..+|+++|+.+++++. .+..+|+++..++|..+.+
T Consensus       187 ~PG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~d~a~~~~~~~~-~~~~~g~~~~i~gg~~~~~  248 (258)
T PRK09134        187 GPGPTLPSGRQSPED---FARQHAATPLGRGSTPEEIAAAVRYLLD-APSVTGQMIAVDGGQHLAW  248 (258)
T ss_pred             ecccccCCcccChHH---HHHHHhcCCCCCCcCHHHHHHHHHHHhc-CCCcCCCEEEECCCeeccc
Confidence            999998875322111   1111112234556799999999997665 4456888888788775544

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.90  E-value=2.2e-22  Score=165.80  Aligned_cols=190  Identities=17%  Similarity=0.218  Sum_probs=151.5

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.+++.++++++.+      ..+++|++|||||...  +..+.+.++|++++++|+.+++.+++.+++
T Consensus        51 ~~~~~~~~~D~~~~~~v~~~~~~~~~------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  124 (245)
T PRK12824         51 EDQVRLKELDVTDTEECAEALAEIEE------EEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFA  124 (245)
T ss_pred             CCeEEEEEcCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            34689999999999999999999988      6789999999999863  455678899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .+++.+ .++||++||..+.                    .+.+....|+.+|+++..+++.++.++.   +.+++++++
T Consensus       125 ~~~~~~-~~~iv~iss~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~l~~~~~---~~~i~v~~v  180 (245)
T PRK12824        125 AMCEQG-YGRIINISSVNGL--------------------KGQFGQTNYSAAKAGMIGFTKALASEGA---RYGITVNCI  180 (245)
T ss_pred             HHHHhC-CeEEEEECChhhc--------------------cCCCCChHHHHHHHHHHHHHHHHHHHHH---HhCeEEEEE
Confidence            998766 7899999998763                    2445567899999999999999999987   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCcc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  230 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~  230 (266)
                      .||++.|++.....+.. ........+++.+.+|+++++.+++++.. ....+|..+..++|..
T Consensus       181 ~pg~~~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~g~~  243 (245)
T PRK12824        181 APGYIATPMVEQMGPEV-LQSIVNQIPMKRLGTPEEIAAAVAFLVSEAAGFITGETISINGGLY  243 (245)
T ss_pred             EEcccCCcchhhcCHHH-HHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEEEECCCee
Confidence            99999999876543321 11111222445567999999999855422 2245688777777753

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1e-22  Score=169.19  Aligned_cols=185  Identities=23%  Similarity=0.249  Sum_probs=139.7

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++++|+++.++++++++++.+      .++++|++|||||...  +..+.+.+++++++++|+.+++.+++.++|.
T Consensus        61 ~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~  134 (257)
T PRK12744         61 AKAVAFQADLTTAAAVEKLFDDAKA------AFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRH  134 (257)
T ss_pred             CcEEEEecCcCCHHHHHHHHHHHHH------hhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHh
Confidence            4688999999999999999999988      5689999999999863  4556778899999999999999999999999


Q ss_pred             HhcCCCCCeEEEE-cCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           89 LKNSPVPSRIVNV-TSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        89 l~~~~~~~~iv~v-sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      |+.   .++++++ +|..+.                     ..+....|+.+|++++.++++++.++.   +.+|+|+++
T Consensus       135 ~~~---~~~iv~~~ss~~~~---------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~~i~v~~v  187 (257)
T PRK12744        135 LND---NGKIVTLVTSLLGA---------------------FTPFYSAYAGSKAPVEHFTRAASKEFG---ARGISVTAV  187 (257)
T ss_pred             hcc---CCCEEEEecchhcc---------------------cCCCcccchhhHHHHHHHHHHHHHHhC---cCceEEEEE
Confidence            875   4677776 444331                     234567899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHHH---HHHHHHHhh--cCCCHHHHHHHHHHHhcCCCCcccceeecCCC
Q 024553          168 DPGVVKTNIMREVPSFLSLM---AFTVLKLLG--LLQSPEKGINSVLDAALAPPETSGVYFFGGKG  228 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~---~~~~~~~~~--~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g  228 (266)
                      +||++.|++...........   ......++.  ++..|+|+|+.+.+++......+|..+..++|
T Consensus       188 ~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~g~~~~~~gg  253 (257)
T PRK12744        188 GPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPFIRFLVTDGWWITGQTILINGG  253 (257)
T ss_pred             ecCccccchhccccccchhhcccccccccccccCCCCCHHHHHHHHHHhhcccceeecceEeecCC
Confidence            99999999764321111100   001111222  56799999999996554322335766665555

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3.5e-22  Score=167.25  Aligned_cols=175  Identities=20%  Similarity=0.245  Sum_probs=141.5

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.+++.++++++.+      ..+++|+||||||...  +..+.+.+++++++++|+.+++.+++.++|
T Consensus        48 ~~~~~~~~~D~~~~~~~~~~~~~i~~------~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  121 (270)
T PRK05650         48 GGDGFYQRCDVRDYSQLTALAQACEE------KWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLP  121 (270)
T ss_pred             CCceEEEEccCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHH
Confidence            44688999999999999999999988      6688999999999863  456677889999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++.+ .++||++||..+.                    .+.+....|+.+|+++.+++++++.++.   ..+|+++.|
T Consensus       122 ~~~~~~-~~~iv~vsS~~~~--------------------~~~~~~~~Y~~sKaa~~~~~~~l~~e~~---~~gi~v~~v  177 (270)
T PRK05650        122 LFKRQK-SGRIVNIASMAGL--------------------MQGPAMSSYNVAKAGVVALSETLLVELA---DDEIGVHVV  177 (270)
T ss_pred             HHHhCC-CCEEEEECChhhc--------------------CCCCCchHHHHHHHHHHHHHHHHHHHhc---ccCcEEEEE
Confidence            998776 7899999998863                    2456678899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHH-HhhcCCCHHHHHHHHHHHhcC
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLK-LLGLLQSPEKGINSVLDAALA  214 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~a~~~~~~~~~  214 (266)
                      +||+++|++................. ......+|+++|+.++.++..
T Consensus       178 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~l~~  225 (270)
T PRK05650        178 CPSFFQTNLLDSFRGPNPAMKAQVGKLLEKSPITAADIADYIYQQVAK  225 (270)
T ss_pred             ecCccccCcccccccCchhHHHHHHHHhhcCCCCHHHHHHHHHHHHhC
Confidence            99999999876542211111111111 112346999999999977654

>PRK06484 short chain dehydrogenase; Validated

Probab=99.90  E-value=1.1e-22  Score=185.40  Aligned_cols=189  Identities=24%  Similarity=0.281  Sum_probs=148.0

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC----CCCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL----ATSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      .++.++.+|++++++++++++++.+      .++++|+||||||+.    .+..+.+.++|++++++|+.+++.+++.++
T Consensus        51 ~~~~~~~~D~~~~~~~~~~~~~~~~------~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  124 (520)
T PRK06484         51 PDHHALAMDVSDEAQIREGFEQLHR------EFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREAL  124 (520)
T ss_pred             CceeEEEeccCCHHHHHHHHHHHHH------HhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            4678899999999999999999988      678999999999984    234567889999999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |+|++++.+++||++||..+.                    .+.+....|+++|+++..++++++.++.   +.+|+|+.
T Consensus       125 ~~~~~~~~g~~iv~isS~~~~--------------------~~~~~~~~Y~asKaal~~l~~~la~e~~---~~~i~v~~  181 (520)
T PRK06484        125 RLMIEQGHGAAIVNVASGAGL--------------------VALPKRTAYSASKAAVISLTRSLACEWA---AKGIRVNA  181 (520)
T ss_pred             HHHHhcCCCCeEEEECCcccC--------------------CCCCCCchHHHHHHHHHHHHHHHHHHhh---hhCeEEEE
Confidence            999876523599999998873                    3456677899999999999999999997   78999999


Q ss_pred             ecCCcccCCccCcchhHHHH--HHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCC
Q 024553          167 ADPGVVKTNIMREVPSFLSL--MAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKG  228 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g  228 (266)
                      |+||+|+|++..........  .......+.+++.+|+++|+.+++++... ...+|..+..++|
T Consensus       182 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~v~~l~~~~~~~~~G~~~~~~gg  246 (520)
T PRK06484        182 VLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLASDQASYITGSTLVVDGG  246 (520)
T ss_pred             EccCCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCceEEecCC
Confidence            99999999987543221111  11111123445679999999999654432 3456666655444

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.89  E-value=3.9e-22  Score=166.71  Aligned_cols=189  Identities=17%  Similarity=0.139  Sum_probs=137.2

Q ss_pred             ccEEEEEecCCCHHHHHHH----HHHHHHhhccCCCCCCcceeeEcCCCCCC--CCcCCCc-----------ccchhhhh
Q 024553           11 ARLEAFQVDLSSFQSVLKF----KDSLQQWLLDSDMHSSIQLLINNAGILAT--SSRLTPE-----------GYDQMMST   73 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~----~~~i~~~~~~~~~~~~ld~lv~nAG~~~~--~~~~~~~-----------~~~~~~~~   73 (266)
                      .++.++.||+++.+++.+.    ++++.+      .++++|+||||||...+  ..+.+.+           .|++++++
T Consensus        52 ~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~------~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (267)
T TIGR02685        52 NSAVTCQADLSNSATLFSRCEAIIDACFR------AFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGS  125 (267)
T ss_pred             CceEEEEccCCCchhhHHHHHHHHHHHHH------ccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHh
Confidence            4677899999999876544    444444      56899999999997632  2222322           47899999


Q ss_pred             hhhhHHHHHHhhHHHHhcCC-----CCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHH
Q 024553           74 NYIGAFFLTKLLLPLLKNSP-----VPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSY  148 (266)
Q Consensus        74 n~~~~~~l~~~~~~~l~~~~-----~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~  148 (266)
                      |+.+++.+++.++++|+...     ..++|++++|..+                    ..+.+...+|+++|++++.+++
T Consensus       126 N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~~~--------------------~~~~~~~~~Y~asK~a~~~~~~  185 (267)
T TIGR02685       126 NAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMT--------------------DQPLLGFTMYTMAKHALEGLTR  185 (267)
T ss_pred             hhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhhhc--------------------cCCCcccchhHHHHHHHHHHHH
Confidence            99999999999999986431     2468999999876                    2356667789999999999999


Q ss_pred             HHHHhhCCCCCCCeEEEEecCCcccCCccCcchhHHHHHHHHHHHHhh-cCCCHHHHHHHHHHHhcCC-CCcccceeecC
Q 024553          149 ELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG-LLQSPEKGINSVLDAALAP-PETSGVYFFGG  226 (266)
Q Consensus       149 ~la~~~~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~  226 (266)
                      +|+.++.   +.+|+|++|+||++.|+...  .... ........+++ ++.+|+++++.+++++..+ ...+|.++..+
T Consensus       186 ~la~e~~---~~gi~v~~v~PG~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~  259 (267)
T TIGR02685       186 SAALELA---PLQIRVNGVAPGLSLLPDAM--PFEV-QEDYRRKVPLGQREASAEQIADVVIFLVSPKAKYITGTCIKVD  259 (267)
T ss_pred             HHHHHHh---hhCeEEEEEecCCccCcccc--chhH-HHHHHHhCCCCcCCCCHHHHHHHHHHHhCcccCCcccceEEEC
Confidence            9999997   78999999999999776321  1111 11111112232 5679999999999765432 35578888777


Q ss_pred             CCccc
Q 024553          227 KGRTV  231 (266)
Q Consensus       227 ~g~~~  231 (266)
                      +|..+
T Consensus       260 gg~~~  264 (267)
T TIGR02685       260 GGLSL  264 (267)
T ss_pred             Cceec
Confidence            66543

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK05855 short chain dehydrogenase; Validated

Probab=99.89  E-value=1.8e-22  Score=185.99  Aligned_cols=177  Identities=24%  Similarity=0.234  Sum_probs=142.6

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.+++.++++++.+      ..+++|+||||||+..  +..+.+.+++++++++|+.|++.+++.++|
T Consensus       363 ~~~~~~~~~Dv~~~~~~~~~~~~~~~------~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~  436 (582)
T PRK05855        363 GAVAHAYRVDVSDADAMEAFAEWVRA------EHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGR  436 (582)
T ss_pred             CCeEEEEEcCCCCHHHHHHHHHHHHH------hcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            34689999999999999999999988      6789999999999863  456778899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++++.+|+||++||.++..                    +.++...|+++|++++.++++++.++.   +.||+|++|
T Consensus       437 ~~~~~~~~g~iv~~sS~~~~~--------------------~~~~~~~Y~~sKaa~~~~~~~l~~e~~---~~gi~v~~v  493 (582)
T PRK05855        437 QMVERGTGGHIVNVASAAAYA--------------------PSRSLPAYATSKAAVLMLSECLRAELA---AAGIGVTAI  493 (582)
T ss_pred             HHHhcCCCcEEEEECChhhcc--------------------CCCCCcHHHHHHHHHHHHHHHHHHHhc---ccCcEEEEE
Confidence            998865458999999998743                    455677899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchh-----H-H-HHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC
Q 024553          168 DPGVVKTNIMREVPS-----F-L-SLMAFTVLKLLGLLQSPEKGINSVLDAALAP  215 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~-----~-~-~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~  215 (266)
                      +||+|+|++......     . . ............+..+|+++|+.+++++...
T Consensus       494 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~~~~~~  548 (582)
T PRK05855        494 CPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPEKVAKAIVDAVKRN  548 (582)
T ss_pred             EeCCCcccchhccccCCcccchhhhHHhhhhhhccccCCCHHHHHHHHHHHHHcC
Confidence            999999998765321     0 0 0000111111123358999999999877543

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.89  E-value=1.7e-22  Score=165.64  Aligned_cols=181  Identities=20%  Similarity=0.244  Sum_probs=139.2

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCC--------CCcCCCcccchhhhhhhhhHHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT--------SSRLTPEGYDQMMSTNYIGAFFL   81 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~--------~~~~~~~~~~~~~~~n~~~~~~l   81 (266)
                      +.++.+++||+++.++++++.+          ..+++|++|||||....        ..+.+.+.|++.+++|+.+++.+
T Consensus        42 ~~~~~~~~~Dls~~~~~~~~~~----------~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~  111 (235)
T PRK09009         42 HDNVQWHALDVTDEAEIKQLSE----------QFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLL  111 (235)
T ss_pred             cCceEEEEecCCCHHHHHHHHH----------hcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHH
Confidence            3468899999999999988543          34789999999998632        23456677899999999999999


Q ss_pred             HHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCC
Q 024553           82 TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRH  161 (266)
Q Consensus        82 ~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~  161 (266)
                      ++.++|.|++++ .++|+++||..+...                 ....+++..|+++|+++..++++|+.++.. ...+
T Consensus       112 ~~~~~~~~~~~~-~~~i~~iss~~~~~~-----------------~~~~~~~~~Y~asK~a~~~~~~~la~e~~~-~~~~  172 (235)
T PRK09009        112 AKHFTPKLKQSE-SAKFAVISAKVGSIS-----------------DNRLGGWYSYRASKAALNMFLKTLSIEWQR-SLKH  172 (235)
T ss_pred             HHHHHhhccccC-CceEEEEeecccccc-----------------cCCCCCcchhhhhHHHHHHHHHHHHHHhhc-ccCC
Confidence            999999998766 689999998654210                 123455678999999999999999999861 0269


Q ss_pred             eEEEEecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCC
Q 024553          162 VSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKG  228 (266)
Q Consensus       162 i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g  228 (266)
                      |+|++|+||+++|++......         ..+.++..+|+++|+.+++++... +..+|.++..+++
T Consensus       173 i~v~~v~PG~v~t~~~~~~~~---------~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g~  231 (235)
T PRK09009        173 GVVLALHPGTTDTALSKPFQQ---------NVPKGKLFTPEYVAQCLLGIIANATPAQSGSFLAYDGE  231 (235)
T ss_pred             eEEEEEcccceecCCCcchhh---------ccccCCCCCHHHHHHHHHHHHHcCChhhCCcEEeeCCc
Confidence            999999999999998754321         112344569999999999776554 3558998875443

>PRK09186 flagellin modification protein A; Provisional

Probab=99.89  E-value=2.6e-22  Score=166.51  Aligned_cols=195  Identities=13%  Similarity=0.132  Sum_probs=144.8

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC-----CCCCcCCCcccchhhhhhhhhHHHHHHh
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL-----ATSSRLTPEGYDQMMSTNYIGAFFLTKL   84 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~-----~~~~~~~~~~~~~~~~~n~~~~~~l~~~   84 (266)
                      +..+.++.||+++.+++.++++++.+      .++++|++|||||..     .+..+.+.+.++.++++|+.+++.+++.
T Consensus        54 ~~~~~~~~~Dl~d~~~~~~~~~~~~~------~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~  127 (256)
T PRK09186         54 SKKLSLVELDITDQESLEEFLSKSAE------KYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQ  127 (256)
T ss_pred             CCceeEEEecCCCHHHHHHHHHHHHH------HcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHH
Confidence            34567889999999999999999988      668999999999864     2345677888999999999999999999


Q ss_pred             hHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEE
Q 024553           85 LLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSV  164 (266)
Q Consensus        85 ~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v  164 (266)
                      ++|.|++++ .++||++||..+........          .+.........|+.+|++++.++++++.++.   +.+|++
T Consensus       128 ~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~----------~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~---~~~i~v  193 (256)
T PRK09186        128 FAKYFKKQG-GGNLVNISSIYGVVAPKFEI----------YEGTSMTSPVEYAAIKAGIIHLTKYLAKYFK---DSNIRV  193 (256)
T ss_pred             HHHHHHhcC-CceEEEEechhhhccccchh----------ccccccCCcchhHHHHHHHHHHHHHHHHHhC---cCCeEE
Confidence            999998776 68999999977643210000          0011222234799999999999999999997   789999


Q ss_pred             EEecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          165 IAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       165 ~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      ++++||++.++.....     ...+....+.+++.+|+++|+.+++++... ...+|.++..++|.
T Consensus       194 ~~i~Pg~~~~~~~~~~-----~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~  254 (256)
T PRK09186        194 NCVSPGGILDNQPEAF-----LNAYKKCCNGKGMLDPDDICGTLVFLLSDQSKYITGQNIIVDDGF  254 (256)
T ss_pred             EEEecccccCCCCHHH-----HHHHHhcCCccCCCCHHHhhhhHhheeccccccccCceEEecCCc
Confidence            9999999987642111     111111122345679999999999654322 24578888766663

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.7e-22  Score=166.75  Aligned_cols=189  Identities=23%  Similarity=0.196  Sum_probs=145.0

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCC-CCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT-SSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      +.++.++.+|+++.+++.++++++.+      .++++|++|||||.... ..+.+.++|++.+++|+.+++.+++.++|.
T Consensus        54 ~~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  127 (258)
T PRK08628         54 QPRAEFVQVDLTDDAQCRDAVEQTVA------KFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPH  127 (258)
T ss_pred             CCceEEEEccCCCHHHHHHHHHHHHH------hcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence            34689999999999999999999988      66899999999997532 223334889999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      +++.  .++||++||..+.                    .+.+....|+.+|++++.++++++.++.   +++|++++|+
T Consensus       128 ~~~~--~~~iv~~ss~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~l~~e~~---~~~i~v~~v~  182 (258)
T PRK08628        128 LKAS--RGAIVNISSKTAL--------------------TGQGGTSGYAAAKGAQLALTREWAVALA---KDGVRVNAVI  182 (258)
T ss_pred             hhcc--CcEEEEECCHHhc--------------------cCCCCCchhHHHHHHHHHHHHHHHHHHh---hcCeEEEEEe
Confidence            8764  4799999998762                    2445667899999999999999999997   7899999999


Q ss_pred             CCcccCCccCcc----hhHHHHHHH-HHHHHh-hcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          169 PGVVKTNIMREV----PSFLSLMAF-TVLKLL-GLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       169 PG~v~T~~~~~~----~~~~~~~~~-~~~~~~-~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      ||.++|++....    ......... ....+. .++.+|+++|+.+++++... ...+|.++..++|.
T Consensus       183 pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~  250 (258)
T PRK08628        183 PAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLSERSSHTTGQWLFVDGGY  250 (258)
T ss_pred             cCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHHHHhChhhccccCceEEecCCc
Confidence            999999975431    111111111 111122 25679999999999765543 35678887766654

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.7e-22  Score=174.01  Aligned_cols=174  Identities=22%  Similarity=0.212  Sum_probs=141.4

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|++|||||..  .+..+.+.+++++++++|+.|++.+++.+++
T Consensus        56 g~~~~~v~~Dv~d~~~v~~~~~~~~~------~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~  129 (334)
T PRK07109         56 GGEALAVVADVADAEAVQAAADRAEE------ELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALR  129 (334)
T ss_pred             CCcEEEEEecCCCHHHHHHHHHHHHH------HCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            45788999999999999999999988      678999999999975  4556778899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++++ .++||++||..+.                    .+.+....|+.+|+++..++++++.++.. ...+|+++.|
T Consensus       130 ~~~~~~-~g~iV~isS~~~~--------------------~~~~~~~~Y~asK~a~~~~~~~l~~el~~-~~~~I~v~~v  187 (334)
T PRK07109        130 HMRPRD-RGAIIQVGSALAY--------------------RSIPLQSAYCAAKHAIRGFTDSLRCELLH-DGSPVSVTMV  187 (334)
T ss_pred             HHHhcC-CcEEEEeCChhhc--------------------cCCCcchHHHHHHHHHHHHHHHHHHHHhh-cCCCeEEEEE
Confidence            998876 7899999998873                    24556678999999999999999999852 0257999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP  215 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~  215 (266)
                      +||.++|++........    .....+...+.+|+++|+.+++++..+
T Consensus       188 ~Pg~v~T~~~~~~~~~~----~~~~~~~~~~~~pe~vA~~i~~~~~~~  231 (334)
T PRK07109        188 QPPAVNTPQFDWARSRL----PVEPQPVPPIYQPEVVADAILYAAEHP  231 (334)
T ss_pred             eCCCccCchhhhhhhhc----cccccCCCCCCCHHHHHHHHHHHHhCC
Confidence            99999999765321110    001112334569999999999776554

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.89  E-value=1.6e-22  Score=165.45  Aligned_cols=140  Identities=34%  Similarity=0.472  Sum_probs=127.1

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC---CCCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      ..+...+..|++++++|+++++.+++.++    ..++=.||||||+.   ++....+.+++++++++|++|++.+++.++
T Consensus        75 s~rl~t~~LDVT~~esi~~a~~~V~~~l~----~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~l  150 (322)
T KOG1610|consen   75 SPRLRTLQLDVTKPESVKEAAQWVKKHLG----EDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFL  150 (322)
T ss_pred             CCcceeEeeccCCHHHHHHHHHHHHHhcc----cccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHH
Confidence            56788999999999999999999998664    34599999999976   566778899999999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |+++++  .||||++||+.|+.                    +.+...+|++||+|++.++.+|.+|+.   +.||.|..
T Consensus       151 pLlr~a--rGRvVnvsS~~GR~--------------------~~p~~g~Y~~SK~aVeaf~D~lR~EL~---~fGV~Vsi  205 (322)
T KOG1610|consen  151 PLLRRA--RGRVVNVSSVLGRV--------------------ALPALGPYCVSKFAVEAFSDSLRRELR---PFGVKVSI  205 (322)
T ss_pred             HHHHhc--cCeEEEecccccCc--------------------cCcccccchhhHHHHHHHHHHHHHHHH---hcCcEEEE
Confidence            999987  49999999999854                    677788999999999999999999998   99999999


Q ss_pred             ecCCcccCCccC
Q 024553          167 ADPGVVKTNIMR  178 (266)
Q Consensus       167 v~PG~v~T~~~~  178 (266)
                      |.||+.+|++..
T Consensus       206 iePG~f~T~l~~  217 (322)
T KOG1610|consen  206 IEPGFFKTNLAN  217 (322)
T ss_pred             eccCccccccCC
Confidence            999999999987

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.89  E-value=5e-22  Score=165.69  Aligned_cols=191  Identities=18%  Similarity=0.161  Sum_probs=148.3

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.||+++.+++.++++++.+      .++++|+||||||...  +..+.+.+++++++++|+.+++.+++.+.++
T Consensus        59 ~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  132 (263)
T PRK07814         59 RRAHVVAADLAHPEATAGLAGQAVE------AFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPL  132 (263)
T ss_pred             CcEEEEEccCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHH
Confidence            4688999999999999999999988      5689999999999753  3456778899999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |.+....++||++||..+.                    .+.++...|+++|+++..++++++.++.    ++|++++|+
T Consensus       133 ~~~~~~~g~iv~~sS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~~~~e~~----~~i~v~~i~  188 (263)
T PRK07814        133 MLEHSGGGSVINISSTMGR--------------------LAGRGFAAYGTAKAALAHYTRLAALDLC----PRIRVNAIA  188 (263)
T ss_pred             HHhhcCCeEEEEEcccccc--------------------CCCCCCchhHHHHHHHHHHHHHHHHHHC----CCceEEEEE
Confidence            9874326899999998763                    2455677899999999999999999985    479999999


Q ss_pred             CCcccCCccCcchhHHHHHH-HHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCccc
Q 024553          169 PGVVKTNIMREVPSFLSLMA-FTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  231 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~  231 (266)
                      ||+++|++............ .....+..+..+|+++|+.+++++... ...+|..+..++|...
T Consensus       189 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~~~~~  253 (263)
T PRK07814        189 PGSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLASPAGSYLTGKTLEVDGGLTF  253 (263)
T ss_pred             eCCCcCchhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCCCEEEECCCccC
Confidence            99999997654221111111 111123445679999999999655322 3457888776655433

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.89  E-value=2.3e-22  Score=171.95  Aligned_cols=171  Identities=19%  Similarity=0.175  Sum_probs=130.4

Q ss_pred             hhcccCCCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC----CCCcCCCcccchhhhhhhhhH
Q 024553            3 DITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA----TSSRLTPEGYDQMMSTNYIGA   78 (266)
Q Consensus         3 ~i~~~~~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~----~~~~~~~~~~~~~~~~n~~~~   78 (266)
                      +|.+.+++.++..+.+|+++  ++.+.++++.+.+    ....+|++|||||+..    ++.+.+.+++++++++|+.|+
T Consensus        96 ~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~----~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~  169 (320)
T PLN02780         96 SIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETI----EGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGT  169 (320)
T ss_pred             HHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHh----cCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHH
Confidence            34444555678999999995  2333334443322    1135779999999863    345678889999999999999


Q ss_pred             HHHHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCC
Q 024553           79 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDK  158 (266)
Q Consensus        79 ~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~  158 (266)
                      +.+++.++|.|.+++ .|+||++||.++..                  ....+....|++||+++..++++|+.++.   
T Consensus       170 ~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~------------------~~~~p~~~~Y~aSKaal~~~~~~L~~El~---  227 (320)
T PLN02780        170 TKVTQAVLPGMLKRK-KGAIINIGSGAAIV------------------IPSDPLYAVYAATKAYIDQFSRCLYVEYK---  227 (320)
T ss_pred             HHHHHHHHHHHHhcC-CcEEEEEechhhcc------------------CCCCccchHHHHHHHHHHHHHHHHHHHHh---
Confidence            999999999998876 79999999987631                  01235678899999999999999999997   


Q ss_pred             CCCeEEEEecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Q 024553          159 SRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAAL  213 (266)
Q Consensus       159 ~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~  213 (266)
                      +.||+|++|+||+|+|++.......           + ...+|+++|+.++..+.
T Consensus       228 ~~gI~V~~v~PG~v~T~~~~~~~~~-----------~-~~~~p~~~A~~~~~~~~  270 (320)
T PLN02780        228 KSGIDVQCQVPLYVATKMASIRRSS-----------F-LVPSSDGYARAALRWVG  270 (320)
T ss_pred             ccCeEEEEEeeCceecCcccccCCC-----------C-CCCCHHHHHHHHHHHhC
Confidence            7899999999999999986521110           0 12489999999997764

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.89  E-value=4.4e-22  Score=164.01  Aligned_cols=188  Identities=22%  Similarity=0.272  Sum_probs=148.3

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.+|+++.+++.++++++.+      .++++|++|||||...  +....+.+++++++++|+.+++.+++.+.+.
T Consensus        52 ~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  125 (245)
T PRK12936         52 ERVKIFPANLSDRDEVKALGQKAEA------DLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHP  125 (245)
T ss_pred             CceEEEEccCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHH
Confidence            4688999999999999999999988      6689999999999864  3445677889999999999999999999998


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      +.+++ .++||++||..+.                    .+.+....|+.+|+++..+++.++.++.   ..++++++++
T Consensus       126 ~~~~~-~~~iv~~sS~~~~--------------------~~~~~~~~Y~~sk~a~~~~~~~la~~~~---~~~i~v~~i~  181 (245)
T PRK12936        126 MMRRR-YGRIINITSVVGV--------------------TGNPGQANYCASKAGMIGFSKSLAQEIA---TRNVTVNCVA  181 (245)
T ss_pred             HHHhC-CCEEEEECCHHhC--------------------cCCCCCcchHHHHHHHHHHHHHHHHHhh---HhCeEEEEEE
Confidence            87655 6899999998752                    2445567899999999999999999987   7899999999


Q ss_pred             CCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          169 PGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      ||+++|++.....+... .......+.+++.+|+++++.+++++... ...+|..+..++|.
T Consensus       182 pg~~~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ia~~~~~l~~~~~~~~~G~~~~~~~g~  242 (245)
T PRK12936        182 PGFIESAMTGKLNDKQK-EAIMGAIPMKRMGTGAEVASAVAYLASSEAAYVTGQTIHVNGGM  242 (245)
T ss_pred             ECcCcCchhcccChHHH-HHHhcCCCCCCCcCHHHHHHHHHHHcCccccCcCCCEEEECCCc
Confidence            99999998755432221 11111224456779999999998654322 23478888766653

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.89  E-value=6.1e-22  Score=165.97  Aligned_cols=174  Identities=26%  Similarity=0.337  Sum_probs=138.6

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      .+.++.||+++.+++.++++++.+      ..+++|+||||||..  .+..+.+.++++.++++|+.|++.+++.++|.|
T Consensus        51 ~~~~~~~D~~~~~~~~~~~~~~~~------~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l  124 (272)
T PRK07832         51 VPEHRALDISDYDAVAAFAADIHA------AHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPM  124 (272)
T ss_pred             cceEEEeeCCCHHHHHHHHHHHHH------hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            356689999999999999999988      568899999999975  345677889999999999999999999999999


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      .+++..++||++||..+.                    .+.+....|+.+|+++..++++++.++.   ..+|+++.++|
T Consensus       125 ~~~~~~g~ii~isS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~l~~e~~---~~~i~v~~v~P  181 (272)
T PRK07832        125 VAAGRGGHLVNVSSAAGL--------------------VALPWHAAYSASKFGLRGLSEVLRFDLA---RHGIGVSVVVP  181 (272)
T ss_pred             HhCCCCcEEEEEcccccc--------------------CCCCCCcchHHHHHHHHHHHHHHHHHhh---hcCcEEEEEec
Confidence            765435899999998752                    2455667899999999999999999997   78999999999


Q ss_pred             CcccCCccCcchh-----HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Q 024553          170 GVVKTNIMREVPS-----FLSLMAFTVLKLLGLLQSPEKGINSVLDAALA  214 (266)
Q Consensus       170 G~v~T~~~~~~~~-----~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~  214 (266)
                      |+++|++......     .............++..+|+++|+.+++++..
T Consensus       182 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~~~~~  231 (272)
T PRK07832        182 GAVKTPLVNTVEIAGVDREDPRVQKWVDRFRGHAVTPEKAAEKILAGVEK  231 (272)
T ss_pred             CcccCcchhcccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHhc
Confidence            9999998754310     01101111111233457999999999987743

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=3.7e-22  Score=163.59  Aligned_cols=183  Identities=22%  Similarity=0.207  Sum_probs=140.3

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC---CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      .++.++.+|++++      ++++.+      ..+++|++|||||..   .+..+.+.+++++++++|+.+++.+++.++|
T Consensus        45 ~~~~~~~~D~~~~------~~~~~~------~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  112 (235)
T PRK06550         45 GNFHFLQLDLSDD------LEPLFD------WVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLP  112 (235)
T ss_pred             CcEEEEECChHHH------HHHHHH------hhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            3578999999987      344444      347899999999975   3445677889999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .+++++ .++||++||..+.                    .+.+....|+.+|+++..++++++.++.   +.+|+++++
T Consensus       113 ~~~~~~-~~~iv~~sS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~~~~---~~gi~v~~v  168 (235)
T PRK06550        113 QMLERK-SGIIINMCSIASF--------------------VAGGGGAAYTASKHALAGFTKQLALDYA---KDGIQVFGI  168 (235)
T ss_pred             HHHhcC-CcEEEEEcChhhc--------------------cCCCCCcccHHHHHHHHHHHHHHHHHhh---hcCeEEEEE
Confidence            998776 7899999998763                    2345567899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcc-hhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          168 DPGVVKTNIMREV-PSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       168 ~PG~v~T~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      +||+++|++.... .............+++++.+|+++|+.+++++... ...+|..+..++|.
T Consensus       169 ~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~g~~~~~~gg~  232 (235)
T PRK06550        169 APGAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLFLASGKADYMQGTIVPIDGGW  232 (235)
T ss_pred             eeCCccCcccccccCchHHHHHHhccCCcCCCCCHHHHHHHHHHHcChhhccCCCcEEEECCce
Confidence            9999999986432 21111111112234566789999999999655322 35578888777664

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=5.6e-22  Score=164.55  Aligned_cols=191  Identities=24%  Similarity=0.300  Sum_probs=148.6

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC----CCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA----TSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      .++.++.+|+++.+++.++++++.+      .++++|++|||||...    +..+.+.+++++++++|+.+++.+++.+.
T Consensus        52 ~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  125 (256)
T PRK12745         52 VEVIFFPADVADLSAHEAMLDAAQA------AWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVA  125 (256)
T ss_pred             CceEEEEecCCCHHHHHHHHHHHHH------hcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHH
Confidence            4689999999999999999999988      6688999999999753    24456778999999999999999999999


Q ss_pred             HHHhcCCC-----CCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCC
Q 024553           87 PLLKNSPV-----PSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRH  161 (266)
Q Consensus        87 ~~l~~~~~-----~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~  161 (266)
                      +.|.++..     .++||++||..+.                    .+.+....|+.+|++++.++++++.++.   +.+
T Consensus       126 ~~~~~~~~~~~~~~~~iv~~sS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~l~~~~~---~~g  182 (256)
T PRK12745        126 KRMLAQPEPEELPHRSIVFVSSVNAI--------------------MVSPNRGEYCISKAGLSMAAQLFAARLA---EEG  182 (256)
T ss_pred             HHHHhccCcCCCCCcEEEEECChhhc--------------------cCCCCCcccHHHHHHHHHHHHHHHHHHH---HhC
Confidence            99986542     3579999998763                    2445567899999999999999999987   789


Q ss_pred             eEEEEecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCcc
Q 024553          162 VSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  230 (266)
Q Consensus       162 i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~  230 (266)
                      +++++++||++.|++.................+++++.+|+++++.+.+++... +..+|.++..++|..
T Consensus       183 i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~gg~~  252 (256)
T PRK12745        183 IGVYEVRPGLIKTDMTAPVTAKYDALIAKGLVPMPRWGEPEDVARAVAALASGDLPYSTGQAIHVDGGLS  252 (256)
T ss_pred             CEEEEEecCCCcCccccccchhHHhhhhhcCCCcCCCcCHHHHHHHHHHHhCCcccccCCCEEEECCCee
Confidence            999999999999988654322221111111223455679999999998544321 235788888777654

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.89  E-value=5.2e-22  Score=166.82  Aligned_cols=175  Identities=22%  Similarity=0.266  Sum_probs=137.8

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      .+.++.+|+++.+++..+++++.+.     ..+++|++|||||...  +..+.+.++++.++++|+.|++.+++.++|.|
T Consensus        48 ~~~~~~~Dl~d~~~~~~~~~~~~~~-----~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~  122 (277)
T PRK05993         48 GLEAFQLDYAEPESIAALVAQVLEL-----SGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVM  122 (277)
T ss_pred             CceEEEccCCCHHHHHHHHHHHHHH-----cCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHH
Confidence            4678999999999999999998662     2368999999999863  45567788899999999999999999999999


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      ++++ .++||++||..+.                    .+.+....|+++|++++.++++++.++.   +.+|+++.|+|
T Consensus       123 ~~~~-~g~iv~isS~~~~--------------------~~~~~~~~Y~asK~a~~~~~~~l~~el~---~~gi~v~~v~P  178 (277)
T PRK05993        123 RKQG-QGRIVQCSSILGL--------------------VPMKYRGAYNASKFAIEGLSLTLRMELQ---GSGIHVSLIEP  178 (277)
T ss_pred             hhcC-CCEEEEECChhhc--------------------CCCCccchHHHHHHHHHHHHHHHHHHhh---hhCCEEEEEec
Confidence            8876 7899999998763                    2455667899999999999999999997   78999999999


Q ss_pred             CcccCCccCcchhHHH-------------H---HHHHH--HHHhhcCCCHHHHHHHHHHHhcCC
Q 024553          170 GVVKTNIMREVPSFLS-------------L---MAFTV--LKLLGLLQSPEKGINSVLDAALAP  215 (266)
Q Consensus       170 G~v~T~~~~~~~~~~~-------------~---~~~~~--~~~~~~~~~p~~~a~~~~~~~~~~  215 (266)
                      |+++|++..+......             .   .....  ........+|+++|+.++.++...
T Consensus       179 g~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~~a~~~~  242 (277)
T PRK05993        179 GPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLGPEAVYAVLLHALTAP  242 (277)
T ss_pred             CCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCCHHHHHHHHHHHHcCC
Confidence            9999998764321100             0   00000  001112358999999999776543

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.89  E-value=7.4e-22  Score=163.38  Aligned_cols=190  Identities=21%  Similarity=0.202  Sum_probs=150.0

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      ..+++|+||||||...  +..+.+.+++++++++|+.+++.+++.+++
T Consensus        52 ~~~~~~~~~D~~~~~~~~~~~~~i~~------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  125 (252)
T PRK06138         52 GGRAFARQGDVGSAEAVEALVDFVAA------RWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIP  125 (252)
T ss_pred             CCeEEEEEcCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHH
Confidence            45689999999999999999999998      6789999999999863  345667888999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++.+ .++|+++||..+.                    .+.+....|+.+|+++..++++++.++.   ..+++++.+
T Consensus       126 ~~~~~~-~~~ii~~sS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~l~~~~~---~~~i~v~~v  181 (252)
T PRK06138        126 IMQRQG-GGSIVNTASQLAL--------------------AGGRGRAAYVASKGAIASLTRAMALDHA---TDGIRVNAV  181 (252)
T ss_pred             HHHhcC-CeEEEEECChhhc--------------------cCCCCccHHHHHHHHHHHHHHHHHHHHH---hcCeEEEEE
Confidence            998766 7899999998752                    2445567899999999999999999987   789999999


Q ss_pred             cCCcccCCccCcchhH-----HHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC-CcccceeecCCCc
Q 024553          168 DPGVVKTNIMREVPSF-----LSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGR  229 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~-----~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~-~~~G~~~~~~~g~  229 (266)
                      +||++.|++.......     ..........+...+.+|+++|+.+++++..+. ..+|.++..++|.
T Consensus       182 ~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~  249 (252)
T PRK06138        182 APGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLASDESSFATGTTLVVDGGW  249 (252)
T ss_pred             EECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCe
Confidence            9999999986543211     100001111233446789999999997655432 5578888776653

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.89  E-value=4e-22  Score=167.11  Aligned_cols=164  Identities=20%  Similarity=0.216  Sum_probs=139.2

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      ++.++.||+++.+++.++++++.+      .++++|++|||||+..  +..+.+.+.+++++++|+.|++.+++.++|.|
T Consensus        51 ~~~~~~~D~~~~~~~~~~~~~~~~------~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~  124 (273)
T PRK07825         51 LVVGGPLDVTDPASFAAFLDAVEA------DLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRM  124 (273)
T ss_pred             cceEEEccCCCHHHHHHHHHHHHH------HcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            478899999999999999999988      6689999999999863  44566778899999999999999999999999


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      ++++ .++||++||..+.                    .+.++...|+++|+++..++++++.++.   ..+|+++.|+|
T Consensus       125 ~~~~-~g~iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~~~~~l~~el~---~~gi~v~~v~P  180 (273)
T PRK07825        125 VPRG-RGHVVNVASLAGK--------------------IPVPGMATYCASKHAVVGFTDAARLELR---GTGVHVSVVLP  180 (273)
T ss_pred             HhCC-CCEEEEEcCcccc--------------------CCCCCCcchHHHHHHHHHHHHHHHHHhh---ccCcEEEEEeC
Confidence            9877 7899999998863                    3556678899999999999999999997   78999999999


Q ss_pred             CcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC
Q 024553          170 GVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP  215 (266)
Q Consensus       170 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~  215 (266)
                      |++.|++........          .....+|+++|+.++.++..+
T Consensus       181 g~v~t~~~~~~~~~~----------~~~~~~~~~va~~~~~~l~~~  216 (273)
T PRK07825        181 SFVNTELIAGTGGAK----------GFKNVEPEDVAAAIVGTVAKP  216 (273)
T ss_pred             CcCcchhhccccccc----------CCCCCCHHHHHHHHHHHHhCC
Confidence            999999876542110          113469999999999776544

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.88  E-value=8.8e-22  Score=165.25  Aligned_cols=191  Identities=14%  Similarity=0.155  Sum_probs=150.7

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC---CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      .++.++.||+++.+++.++++++.+      ..+++|++|||||...   +..+.+.++++.++++|+.+++.+++.+++
T Consensus        58 ~~~~~~~~Dl~~~~~~~~~~~~~~~------~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  131 (276)
T PRK05875         58 GAVRYEPADVTDEDQVARAVDAATA------WHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAAR  131 (276)
T ss_pred             CceEEEEcCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            5788999999999999999999988      6689999999999752   445667788999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|.+.+ .++|+++||..+.                    .+.+....|+.+|++++.++++++.++.   ..+|+++.|
T Consensus       132 ~~~~~~-~g~iv~~sS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~~~~~~~---~~~i~v~~i  187 (276)
T PRK05875        132 ELVRGG-GGSFVGISSIAAS--------------------NTHRWFGAYGVTKSAVDHLMKLAADELG---PSWVRVNSI  187 (276)
T ss_pred             HHHhcC-CcEEEEEechhhc--------------------CCCCCCcchHHHHHHHHHHHHHHHHHhc---ccCeEEEEE
Confidence            998766 6899999998762                    2344567899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHHH-HHHHHHHhhcCCCHHHHHHHHHHHhcCCC-CcccceeecCCCccc
Q 024553          168 DPGVVKTNIMREVPSFLSLM-AFTVLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRTV  231 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~a~~~~~~~~~~~-~~~G~~~~~~~g~~~  231 (266)
                      .||+++|++........... ......++.++.+|+++++.+++++..+. ..+|.++..++|..+
T Consensus       188 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~  253 (276)
T PRK05875        188 RPGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVANLAMFLLSDAASWITGQVINVDGGHML  253 (276)
T ss_pred             ecCccCCccccccccCHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCCeec
Confidence            99999999875432211111 11112234566789999999996554332 346888887777654

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.88  E-value=5.3e-22  Score=161.89  Aligned_cols=134  Identities=19%  Similarity=0.139  Sum_probs=116.6

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCC-CcceeeEcCCCC---CCCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHS-SIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~-~ld~lv~nAG~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      .++..+.||+++.++++++++++.+      +++ ++|++|||||..   .+..+.+.++|.+.+++|+.+++.+++.++
T Consensus        54 ~~~~~~~~D~~~~~~~~~~~~~~~~------~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (227)
T PRK08862         54 DNVYSFQLKDFSQESIRHLFDAIEQ------QFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAA  127 (227)
T ss_pred             CCeEEEEccCCCHHHHHHHHHHHHH------HhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            4578899999999999999999988      567 899999999854   245567778899999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |+|++++.+|+||++||..+                       .+....|+++|+++..|+++++.++.   +++|+||+
T Consensus       128 ~~m~~~~~~g~Iv~isS~~~-----------------------~~~~~~Y~asKaal~~~~~~la~el~---~~~Irvn~  181 (227)
T PRK08862        128 ERMRKRNKKGVIVNVISHDD-----------------------HQDLTGVESSNALVSGFTHSWAKELT---PFNIRVGG  181 (227)
T ss_pred             HHHHhcCCCceEEEEecCCC-----------------------CCCcchhHHHHHHHHHHHHHHHHHHh---hcCcEEEE
Confidence            99987543689999999753                       23456799999999999999999997   78999999


Q ss_pred             ecCCcccCCc
Q 024553          167 ADPGVVKTNI  176 (266)
Q Consensus       167 v~PG~v~T~~  176 (266)
                      |+||+++|+.
T Consensus       182 v~PG~i~t~~  191 (227)
T PRK08862        182 VVPSIFSANG  191 (227)
T ss_pred             EecCcCcCCC
Confidence            9999999993

>PRK12742 oxidoreductase; Provisional

Probab=99.88  E-value=1e-21  Score=161.12  Aligned_cols=179  Identities=17%  Similarity=0.183  Sum_probs=138.4

Q ss_pred             EEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           13 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        13 ~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      +.++.+|+++.+++.+++++          .+++|++|||||...  +..+.+.++|++++++|+.+++.+++.+++.|+
T Consensus        53 ~~~~~~D~~~~~~~~~~~~~----------~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  122 (237)
T PRK12742         53 ATAVQTDSADRDAVIDVVRK----------SGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMP  122 (237)
T ss_pred             CeEEecCCCCHHHHHHHHHH----------hCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHh
Confidence            56788999999988777642          367999999999863  445677889999999999999999999999996


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                      +   .++||++||..+.                   ..+.++...|+.+|++++.++++++.++.   +.+|+|+.|+||
T Consensus       123 ~---~g~iv~isS~~~~-------------------~~~~~~~~~Y~~sKaa~~~~~~~la~~~~---~~gi~v~~v~Pg  177 (237)
T PRK12742        123 E---GGRIIIIGSVNGD-------------------RMPVAGMAAYAASKSALQGMARGLARDFG---PRGITINVVQPG  177 (237)
T ss_pred             c---CCeEEEEeccccc-------------------cCCCCCCcchHHhHHHHHHHHHHHHHHHh---hhCeEEEEEecC
Confidence            5   5799999997752                   12445677899999999999999999997   789999999999


Q ss_pred             cccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCC
Q 024553          171 VVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKG  228 (266)
Q Consensus       171 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g  228 (266)
                      +++|++.....+..  .......+++++.+|+++++.+++++... ...+|..+..++|
T Consensus       178 ~~~t~~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~~~~~l~s~~~~~~~G~~~~~dgg  234 (237)
T PRK12742        178 PIDTDANPANGPMK--DMMHSFMAIKRHGRPEEVAGMVAWLAGPEASFVTGAMHTIDGA  234 (237)
T ss_pred             cccCCccccccHHH--HHHHhcCCCCCCCCHHHHHHHHHHHcCcccCcccCCEEEeCCC
Confidence            99999865432211  11111224567789999999998544321 2457887776655

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.88  E-value=9.6e-22  Score=164.06  Aligned_cols=189  Identities=16%  Similarity=0.171  Sum_probs=146.6

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .+++++.+|+++.+++.++++++.+      .++++|++|||||..  .+..+.+.++|++++++|+.|++.+++.++|.
T Consensus        58 ~~~~~~~~Dv~~~~~i~~~~~~~~~------~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~  131 (264)
T PRK07576         58 PEGLGVSADVRDYAAVEAAFAQIAD------EFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPL  131 (264)
T ss_pred             CceEEEECCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            3578999999999999999999988      568899999999865  34456678889999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |+++  +++||++||..+.                    .+.+....|+++|++++.++++++.++.   ..+|+++.|+
T Consensus       132 l~~~--~g~iv~iss~~~~--------------------~~~~~~~~Y~asK~a~~~l~~~la~e~~---~~gi~v~~v~  186 (264)
T PRK07576        132 LRRP--GASIIQISAPQAF--------------------VPMPMQAHVCAAKAGVDMLTRTLALEWG---PEGIRVNSIV  186 (264)
T ss_pred             HHhC--CCEEEEECChhhc--------------------cCCCCccHHHHHHHHHHHHHHHHHHHhh---hcCeEEEEEe
Confidence            9754  4799999998762                    2456677899999999999999999997   7899999999


Q ss_pred             CCccc-CCccCcchhHHH-HHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCcc
Q 024553          169 PGVVK-TNIMREVPSFLS-LMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  230 (266)
Q Consensus       169 PG~v~-T~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~  230 (266)
                      ||+++ |+......+... ........++++..+|+++|+.+++++... ...+|.++..++|..
T Consensus       187 pg~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~~gg~~  251 (264)
T PRK07576        187 PGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANAALFLASDMASYITGVVLPVDGGWS  251 (264)
T ss_pred             cccccCcHHHhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCccCCEEEECCCcc
Confidence            99997 554332211111 111111224566779999999999665422 245788877777653

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=7.3e-22  Score=168.18  Aligned_cols=187  Identities=21%  Similarity=0.152  Sum_probs=142.9

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.+++.++++++.+       ++++|+||||||+..  +..+.+.++|++++++|+.+++.+++.+.+
T Consensus        61 g~~~~~~~~Dv~d~~~~~~~~~~~~~-------~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~  133 (306)
T PRK07792         61 GAKAVAVAGDISQRATADELVATAVG-------LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAA  133 (306)
T ss_pred             CCeEEEEeCCCCCHHHHHHHHHHHHH-------hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHH
Confidence            45789999999999999999999876       378999999999874  345677889999999999999999999999


Q ss_pred             HHhcCC------CCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCC
Q 024553           88 LLKNSP------VPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRH  161 (266)
Q Consensus        88 ~l~~~~------~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~  161 (266)
                      +|+++.      ..|+||++||..+..                    +.++...|+++|+++..+++.++.++.   ++|
T Consensus       134 ~~~~~~~~~~~~~~g~iv~isS~~~~~--------------------~~~~~~~Y~asKaal~~l~~~la~e~~---~~g  190 (306)
T PRK07792        134 YWRAKAKAAGGPVYGRIVNTSSEAGLV--------------------GPVGQANYGAAKAGITALTLSAARALG---RYG  190 (306)
T ss_pred             HHHHhhcccCCCCCcEEEEECCccccc--------------------CCCCCchHHHHHHHHHHHHHHHHHHhh---hcC
Confidence            997531      137999999987632                    445567899999999999999999997   789


Q ss_pred             eEEEEecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCccc
Q 024553          162 VSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  231 (266)
Q Consensus       162 i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~  231 (266)
                      |+||+|+||. .|++............   . ......+|+++|..+++++... ...+|..+..++|...
T Consensus       191 I~vn~i~Pg~-~t~~~~~~~~~~~~~~---~-~~~~~~~pe~va~~v~~L~s~~~~~~tG~~~~v~gg~~~  256 (306)
T PRK07792        191 VRANAICPRA-RTAMTADVFGDAPDVE---A-GGIDPLSPEHVVPLVQFLASPAAAEVNGQVFIVYGPMVT  256 (306)
T ss_pred             eEEEEECCCC-CCchhhhhccccchhh---h-hccCCCCHHHHHHHHHHHcCccccCCCCCEEEEcCCeEE
Confidence            9999999994 7887543211100000   0 0112348999999998554322 2468888877776544

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.4e-21  Score=161.79  Aligned_cols=191  Identities=23%  Similarity=0.237  Sum_probs=145.7

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCc--ceeeEcCCCCC---CCCcCCCcccchhhhhhhhhHHHHHHh
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSI--QLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKL   84 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~l--d~lv~nAG~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~   84 (266)
                      +.+++++.||+++.++++++++++.+.+.    ...+  .++|+|||...   ++.+.+.++|.+++++|+.+++.+++.
T Consensus        47 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~----~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~  122 (251)
T PRK06924         47 NSNLTFHSLDLQDVHELETNFNEILSSIQ----EDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTST  122 (251)
T ss_pred             CCceEEEEecCCCHHHHHHHHHHHHHhcC----cccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHH
Confidence            34688999999999999999999876321    0122  27899999753   455778899999999999999999999


Q ss_pred             hHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEE
Q 024553           85 LLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSV  164 (266)
Q Consensus        85 ~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v  164 (266)
                      ++++|++.+..++||++||..+                    ..++++...|+.+|++++.+++.++.++.. ...+|+|
T Consensus       123 ~~~~~~~~~~~~~iv~~sS~~~--------------------~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~-~~~~i~v  181 (251)
T PRK06924        123 FMKHTKDWKVDKRVINISSGAA--------------------KNPYFGWSAYCSSKAGLDMFTQTVATEQEE-EEYPVKI  181 (251)
T ss_pred             HHHHHhccCCCceEEEecchhh--------------------cCCCCCcHHHhHHHHHHHHHHHHHHHHhhh-cCCCeEE
Confidence            9999987543579999999776                    335677789999999999999999998741 1468999


Q ss_pred             EEecCCcccCCccCcchh----H-HHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeec
Q 024553          165 IAADPGVVKTNIMREVPS----F-LSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFG  225 (266)
Q Consensus       165 ~~v~PG~v~T~~~~~~~~----~-~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~  225 (266)
                      ++|.||+++|++......    . ..........+.+++.+|+++|+.+++++..+...+|.++..
T Consensus       182 ~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~G~~~~v  247 (251)
T PRK06924        182 VAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGKLLSPEYVAKALRNLLETEDFPNGEVIDI  247 (251)
T ss_pred             EEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCCcCCHHHHHHHHHHHHhcccCCCCCEeeh
Confidence            999999999998543211    0 001112223345677899999999998766555667887764

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.88  E-value=9.5e-22  Score=163.34  Aligned_cols=189  Identities=20%  Similarity=0.184  Sum_probs=146.1

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC---CCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      +.++.++.+|+++.+++..+++++.+      .++++|++|||||...   +..+.+.+++++++++|+.+++.+++.+.
T Consensus        53 ~~~~~~~~~D~~~~~~~~~~~~~~~~------~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  126 (258)
T PRK07890         53 GRRALAVPTDITDEDQCANLVALALE------RFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFT  126 (258)
T ss_pred             CCceEEEecCCCCHHHHHHHHHHHHH------HcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHH
Confidence            34689999999999999999999988      6789999999999753   34466789999999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      +.|++.  .++||++||..+.                    .+.++...|+++|+++..++++++.++.   ..+|+++.
T Consensus       127 ~~~~~~--~~~ii~~sS~~~~--------------------~~~~~~~~Y~~sK~a~~~l~~~~a~~~~---~~~i~v~~  181 (258)
T PRK07890        127 PALAES--GGSIVMINSMVLR--------------------HSQPKYGAYKMAKGALLAASQSLATELG---PQGIRVNS  181 (258)
T ss_pred             HHHHhC--CCEEEEEechhhc--------------------cCCCCcchhHHHHHHHHHHHHHHHHHHh---hcCcEEEE
Confidence            999765  3699999998762                    3456677899999999999999999997   78999999


Q ss_pred             ecCCcccCCccCcchh----------HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCc
Q 024553          167 ADPGVVKTNIMREVPS----------FLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  229 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~----------~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~  229 (266)
                      ++||++.|+.......          ...........+.+++.+|+++++++++++.. ....+|+.+..++|+
T Consensus       182 v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~~~~~~G~~i~~~gg~  255 (258)
T PRK07890        182 VAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASAVLFLASDLARAITGQTLDVNCGE  255 (258)
T ss_pred             EeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHHHHHHHHHHcCHhhhCccCcEEEeCCcc
Confidence            9999999987543211          00011111122345677999999999854432 124567766555554

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.88  E-value=1.7e-21  Score=160.21  Aligned_cols=189  Identities=22%  Similarity=0.245  Sum_probs=150.1

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.+++.++++++.+      ..+++|+||||||...  +..+.+.+.+++++++|+.+++.+++.+++
T Consensus        49 ~~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  122 (242)
T TIGR01829        49 GFDFRVVEGDVSSFESCKAAVAKVEA------ELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVID  122 (242)
T ss_pred             CCceEEEEecCCCHHHHHHHHHHHHH------HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            34688999999999999999999988      6688999999999863  345667788999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++.+ .++||++||..+.                    .+..+...|+.+|.++..++++++.++.   ..+|+++++
T Consensus       123 ~~~~~~-~~~iv~iss~~~~--------------------~~~~~~~~y~~sk~a~~~~~~~la~~~~---~~~i~v~~i  178 (242)
T TIGR01829       123 GMRERG-WGRIINISSVNGQ--------------------KGQFGQTNYSAAKAGMIGFTKALAQEGA---TKGVTVNTI  178 (242)
T ss_pred             HHHhcC-CcEEEEEcchhhc--------------------CCCCCcchhHHHHHHHHHHHHHHHHHhh---hhCeEEEEE
Confidence            998766 6899999998752                    2445567899999999999999999987   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      .||++.|++.....+... .......++.++.+|+++++.+.+++..+ ...+|..+..++|.
T Consensus       179 ~pg~~~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~gg~  240 (242)
T TIGR01829       179 SPGYIATDMVMAMREDVL-NSIVAQIPVGRLGRPEEIAAAVAFLASEEAGYITGATLSINGGL  240 (242)
T ss_pred             eeCCCcCccccccchHHH-HHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEecCCc
Confidence            999999998765433211 11111234456679999999998544322 24578887766664

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2e-21  Score=162.57  Aligned_cols=174  Identities=24%  Similarity=0.302  Sum_probs=140.2

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      ..++++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.+++++++++|+.|++.+++.++|.
T Consensus        45 ~~~~~~~~D~~d~~~~~~~~~~~~~------~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~  118 (270)
T PRK06179         45 PGVELLELDVTDDASVQAAVDEVIA------RAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPH  118 (270)
T ss_pred             CCCeeEEeecCCHHHHHHHHHHHHH------hCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            3578999999999999999999988      6789999999999863  4456678899999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |++++ .++||++||..+..                    +.+....|+.+|++++.++++++.++.   +.+|+++.+.
T Consensus       119 ~~~~~-~~~iv~isS~~~~~--------------------~~~~~~~Y~~sK~a~~~~~~~l~~el~---~~gi~v~~v~  174 (270)
T PRK06179        119 MRAQG-SGRIINISSVLGFL--------------------PAPYMALYAASKHAVEGYSESLDHEVR---QFGIRVSLVE  174 (270)
T ss_pred             HHhcC-CceEEEECCccccC--------------------CCCCccHHHHHHHHHHHHHHHHHHHHh---hhCcEEEEEe
Confidence            98876 78999999987632                    455567899999999999999999997   7899999999


Q ss_pred             CCcccCCccCcchhH------HHH----HHHHHHHHhhcCCCHHHHHHHHHHHhcC
Q 024553          169 PGVVKTNIMREVPSF------LSL----MAFTVLKLLGLLQSPEKGINSVLDAALA  214 (266)
Q Consensus       169 PG~v~T~~~~~~~~~------~~~----~~~~~~~~~~~~~~p~~~a~~~~~~~~~  214 (266)
                      ||+++|++..+....      ...    ..........+..+|+++|+.++.++..
T Consensus       175 pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~  230 (270)
T PRK06179        175 PAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVVKAALG  230 (270)
T ss_pred             CCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHHHHHHcC
Confidence            999999987643211      000    0011112233456899999999966543

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.88  E-value=1.3e-21  Score=161.77  Aligned_cols=188  Identities=23%  Similarity=0.283  Sum_probs=148.2

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.+|+++.++++++++++.+      ..+++|++|||||..  .+..+.+.+++++++++|+.+++.+++.+++.
T Consensus        52 ~~~~~~~~d~~~~~~~~~~~~~~~~------~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  125 (250)
T TIGR03206        52 GNAQAFACDITDRDSVDTAVAAAEQ------ALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPG  125 (250)
T ss_pred             CcEEEEEcCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            4688999999999999999999988      668999999999975  33455677889999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |++.+ .++||++||..+..                    +.+....|+.+|+++..++++++.++.   ..+++++.++
T Consensus       126 ~~~~~-~~~ii~iss~~~~~--------------------~~~~~~~Y~~sK~a~~~~~~~la~~~~---~~~i~v~~v~  181 (250)
T TIGR03206       126 MVERG-AGRIVNIASDAARV--------------------GSSGEAVYAACKGGLVAFSKTMAREHA---RHGITVNVVC  181 (250)
T ss_pred             HHhcC-CeEEEEECchhhcc--------------------CCCCCchHHHHHHHHHHHHHHHHHHHh---HhCcEEEEEe
Confidence            98766 68999999987632                    345567899999999999999999986   6799999999


Q ss_pred             CCcccCCccCcchh----HHH-HHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCC
Q 024553          169 PGVVKTNIMREVPS----FLS-LMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKG  228 (266)
Q Consensus       169 PG~v~T~~~~~~~~----~~~-~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g  228 (266)
                      ||+++|++......    ... ...+....+.+++.+|+|+|+.+++++... ...+|..+..++|
T Consensus       182 pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g  247 (250)
T TIGR03206       182 PGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSSDDASFITGQVLSVSGG  247 (250)
T ss_pred             cCcccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcccCCCcCcEEEeCCC
Confidence            99999997654321    111 111222234456779999999999644322 2446887776655

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.88  E-value=9.9e-22  Score=159.96  Aligned_cols=166  Identities=11%  Similarity=0.089  Sum_probs=129.9

Q ss_pred             EEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC----C----CCcCCCcccchhhhhhhhhHHHHHHh
Q 024553           13 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA----T----SSRLTPEGYDQMMSTNYIGAFFLTKL   84 (266)
Q Consensus        13 ~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~----~----~~~~~~~~~~~~~~~n~~~~~~l~~~   84 (266)
                      +.+++||+++.++++++++++.+         ++|++|||||...    +    ..+ +.++|++++++|+.+++++++.
T Consensus        46 ~~~~~~D~~~~~~v~~~~~~~~~---------~id~lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~  115 (223)
T PRK05884         46 VDAIVCDNTDPASLEEARGLFPH---------HLDTIVNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQS  115 (223)
T ss_pred             CcEEecCCCCHHHHHHHHHHHhh---------cCcEEEECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHH
Confidence            56889999999999999887743         5899999998531    1    112 4678999999999999999999


Q ss_pred             hHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEE
Q 024553           85 LLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSV  164 (266)
Q Consensus        85 ~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v  164 (266)
                      ++|.|++   .|+||+++|...                        +....|+++|+++..++++++.++.   +++|+|
T Consensus       116 ~~~~~~~---~g~Iv~isS~~~------------------------~~~~~Y~asKaal~~~~~~la~e~~---~~gI~v  165 (223)
T PRK05884        116 VGDHLRS---GGSIISVVPENP------------------------PAGSAEAAIKAALSNWTAGQAAVFG---TRGITI  165 (223)
T ss_pred             HHHHhhc---CCeEEEEecCCC------------------------CCccccHHHHHHHHHHHHHHHHHhh---hcCeEE
Confidence            9999975   589999999652                        2235799999999999999999998   789999


Q ss_pred             EEecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCccc
Q 024553          165 IAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  231 (266)
Q Consensus       165 ~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~  231 (266)
                      |+|+||+++|++.....          ..+   ..+|+++++.+++++.. +...+|..+..++|..+
T Consensus       166 ~~v~PG~v~t~~~~~~~----------~~p---~~~~~~ia~~~~~l~s~~~~~v~G~~i~vdgg~~~  220 (223)
T PRK05884        166 NAVACGRSVQPGYDGLS----------RTP---PPVAAEIARLALFLTTPAARHITGQTLHVSHGALA  220 (223)
T ss_pred             EEEecCccCchhhhhcc----------CCC---CCCHHHHHHHHHHHcCchhhccCCcEEEeCCCeec
Confidence            99999999998643211          011   13899999999954332 23557888777776543

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.88  E-value=2.3e-21  Score=161.26  Aligned_cols=192  Identities=21%  Similarity=0.219  Sum_probs=146.5

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.||+++.++++++++++.+      ..+++|++|||||..  .+..+.+.+.|++++++|+.+++.+++.+.++
T Consensus        61 ~~~~~~~~Dl~d~~~i~~~~~~~~~------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  134 (259)
T PRK08213         61 IDALWIAADVADEADIERLAEETLE------RFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKR  134 (259)
T ss_pred             CeEEEEEccCCCHHHHHHHHHHHHH------HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHH
Confidence            4688999999999999999999988      568899999999975  34456678889999999999999999999998


Q ss_pred             -HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           89 -LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        89 -l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                       |.+++ .+++|++||..+....                .........|+.+|++++.++++++.++.   +.+|+++.+
T Consensus       135 ~l~~~~-~~~~v~~sS~~~~~~~----------------~~~~~~~~~Y~~sKa~~~~~~~~~a~~~~---~~gi~v~~v  194 (259)
T PRK08213        135 SMIPRG-YGRIINVASVAGLGGN----------------PPEVMDTIAYNTSKGAVINFTRALAAEWG---PHGIRVNAI  194 (259)
T ss_pred             HHHhcC-CeEEEEECChhhccCC----------------CccccCcchHHHHHHHHHHHHHHHHHHhc---ccCEEEEEE
Confidence             66654 6799999997653210                01123347899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  229 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~  229 (266)
                      +||+++|++.....+... .......++.++.+|+++++.+.+++.. +...+|..+..++|.
T Consensus       195 ~Pg~~~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~~~  256 (259)
T PRK08213        195 APGFFPTKMTRGTLERLG-EDLLAHTPLGRLGDDEDLKGAALLLASDASKHITGQILAVDGGV  256 (259)
T ss_pred             ecCcCCCcchhhhhHHHH-HHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCe
Confidence            999999998665433211 1111222445567899999998854432 234578877766553

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=2.5e-21  Score=160.20  Aligned_cols=188  Identities=19%  Similarity=0.226  Sum_probs=147.4

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCC-----------CcCCCcccchhhhhhhhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS-----------SRLTPEGYDQMMSTNYIGA   78 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~-----------~~~~~~~~~~~~~~n~~~~   78 (266)
                      +.++.++.+|+++.+++.++++++.+      ..+++|++|||||...+.           .+.+.+.++.++++|+.++
T Consensus        53 ~~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~  126 (253)
T PRK08217         53 GTEVRGYAANVTDEEDVEATFAQIAE------DFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGV  126 (253)
T ss_pred             CCceEEEEcCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHH
Confidence            44788999999999999999999987      567899999999975321           3456778999999999999


Q ss_pred             HHHHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCC
Q 024553           79 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDK  158 (266)
Q Consensus        79 ~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~  158 (266)
                      +.+++.+++.|.+....++|+++||...                     .+.++...|+.+|++++.++++++.++.   
T Consensus       127 ~~~~~~~~~~l~~~~~~~~iv~~ss~~~---------------------~~~~~~~~Y~~sK~a~~~l~~~la~~~~---  182 (253)
T PRK08217        127 FLCGREAAAKMIESGSKGVIINISSIAR---------------------AGNMGQTNYSASKAGVAAMTVTWAKELA---  182 (253)
T ss_pred             HHHHHHHHHHHHhcCCCeEEEEEccccc---------------------cCCCCCchhHHHHHHHHHHHHHHHHHHH---
Confidence            9999999999976643678999998653                     1334567899999999999999999987   


Q ss_pred             CCCeEEEEecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCc
Q 024553          159 SRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGR  229 (266)
Q Consensus       159 ~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~  229 (266)
                      +.+|++++++||+++|++.....+... .......+.+.+.+|+++|+.+.+++. ....+|..+..++|.
T Consensus       183 ~~~i~v~~v~pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~a~~~~~l~~-~~~~~g~~~~~~gg~  251 (253)
T PRK08217        183 RYGIRVAAIAPGVIETEMTAAMKPEAL-ERLEKMIPVGRLGEPEEIAHTVRFIIE-NDYVTGRVLEIDGGL  251 (253)
T ss_pred             HcCcEEEEEeeCCCcCccccccCHHHH-HHHHhcCCcCCCcCHHHHHHHHHHHHc-CCCcCCcEEEeCCCc
Confidence            789999999999999998765443221 111122244556799999999997663 345578887766654

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.3e-21  Score=162.49  Aligned_cols=187  Identities=21%  Similarity=0.199  Sum_probs=143.0

Q ss_pred             EEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC----CCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           14 EAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA----TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        14 ~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      .++.||++++++++++++++.+      ..+++|++|||||...    +..+.+.+++++++++|+.+++.+++.++|+|
T Consensus        54 ~~~~~D~~~~~~~~~~~~~~~~------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l  127 (255)
T PRK06057         54 LFVPTDVTDEDAVNALFDTAAE------TYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHM  127 (255)
T ss_pred             cEEEeeCCCHHHHHHHHHHHHH------HcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHH
Confidence            5889999999999999999988      5688999999999763    23355678899999999999999999999999


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      ++++ .++||++||..+...                   ...+...|+.+|+++..+++.++.++.   +.+|+++.|+|
T Consensus       128 ~~~~-~g~iv~~sS~~~~~g-------------------~~~~~~~Y~~sKaal~~~~~~l~~~~~---~~gi~v~~i~p  184 (255)
T PRK06057        128 VRQG-KGSIINTASFVAVMG-------------------SATSQISYTASKGGVLAMSRELGVQFA---RQGIRVNALCP  184 (255)
T ss_pred             HHhC-CcEEEEEcchhhccC-------------------CCCCCcchHHHHHHHHHHHHHHHHHHH---hhCcEEEEEee
Confidence            8766 689999999765210                   122456799999999999999999997   67999999999


Q ss_pred             CcccCCccCcchh--HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCc
Q 024553          170 GVVKTNIMREVPS--FLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  229 (266)
Q Consensus       170 G~v~T~~~~~~~~--~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~  229 (266)
                      |+++|++......  ...........+.+++.+|+++++.+.+++.. ....+|..+..++|.
T Consensus       185 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~~g~  247 (255)
T PRK06057        185 GPVNTPLLQELFAKDPERAARRLVHVPMGRFAEPEEIAAAVAFLASDDASFITASTFLVDGGI  247 (255)
T ss_pred             CCcCCchhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEECCCe
Confidence            9999998654311  11111111122345678999999999854433 234567776656554

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.88  E-value=1.4e-21  Score=162.64  Aligned_cols=189  Identities=20%  Similarity=0.244  Sum_probs=146.7

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.+|+++.+++.++++++.+      ..+++|++|||||...  +..+.+.+++++++++|+.+++.+++.+++
T Consensus        55 ~~~~~~~~~Dl~~~~~~~~~~~~~~~------~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~  128 (262)
T PRK13394         55 GGKAIGVAMDVTNEDAVNAGIDKVAE------RFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALK  128 (262)
T ss_pred             CceEEEEECCCCCHHHHHHHHHHHHH------HcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHH
Confidence            34688999999999999999999988      5688999999999863  334567788999999999999999999999


Q ss_pred             HH-hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           88 LL-KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        88 ~l-~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      .+ ++.+ .++||++||..+.                    .+.+....|+.+|+++..+++.++.++.   +.+|++++
T Consensus       129 ~~~~~~~-~~~iv~~ss~~~~--------------------~~~~~~~~y~~sk~a~~~~~~~la~~~~---~~~i~v~~  184 (262)
T PRK13394        129 HMYKDDR-GGVVIYMGSVHSH--------------------EASPLKSAYVTAKHGLLGLARVLAKEGA---KHNVRSHV  184 (262)
T ss_pred             HHHhhcC-CcEEEEEcchhhc--------------------CCCCCCcccHHHHHHHHHHHHHHHHHhh---hcCeEEEE
Confidence            99 6555 7899999997652                    2445567899999999999999999987   78999999


Q ss_pred             ecCCcccCCccCcchhHHHH--------HHHHH---HHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCC
Q 024553          167 ADPGVVKTNIMREVPSFLSL--------MAFTV---LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKG  228 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~~~~~--------~~~~~---~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g  228 (266)
                      ++||+++|++.....+....        .....   ..+.+.+.+|+|+++++++++..+ ...+|.+|..++|
T Consensus       185 v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~g  258 (262)
T PRK13394        185 VCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLSSFPSAALTGQSFVVSHG  258 (262)
T ss_pred             EeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHcCccccCCcCCEEeeCCc
Confidence            99999999976443221100        00000   112245789999999999655433 2446888877665

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.6e-21  Score=162.26  Aligned_cols=174  Identities=20%  Similarity=0.219  Sum_probs=138.8

Q ss_pred             CCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553            9 KDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus         9 ~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      ++.++.++.||+++.+++.++++++.+.     ..+++|+||||||...  +..+.+.+++++++++|+.+++.+++.+.
T Consensus        46 ~~~~~~~~~~D~~~~~~v~~~~~~~~~~-----~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  120 (260)
T PRK08267         46 GAGNAWTGALDVTDRAAWDAALADFAAA-----TGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAAL  120 (260)
T ss_pred             cCCceEEEEecCCCHHHHHHHHHHHHHH-----cCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            3457899999999999999999988762     1578999999999864  34566788899999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      ++|+..+ .++||++||..+.                    .+.+....|+.+|++++.++++++.++.   +.+|++++
T Consensus       121 ~~~~~~~-~~~iv~isS~~~~--------------------~~~~~~~~Y~~sKaa~~~~~~~l~~~~~---~~~i~v~~  176 (260)
T PRK08267        121 PYLKATP-GARVINTSSASAI--------------------YGQPGLAVYSATKFAVRGLTEALDLEWR---RHGIRVAD  176 (260)
T ss_pred             HHHHhCC-CCEEEEeCchhhC--------------------cCCCCchhhHHHHHHHHHHHHHHHHHhc---ccCcEEEE
Confidence            9998876 7899999998762                    2445567899999999999999999997   78999999


Q ss_pred             ecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Q 024553          167 ADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA  214 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~  214 (266)
                      +.||+++|++..........   ......+...+|+++|+.+++++..
T Consensus       177 i~pg~~~t~~~~~~~~~~~~---~~~~~~~~~~~~~~va~~~~~~~~~  221 (260)
T PRK08267        177 VMPLFVDTAMLDGTSNEVDA---GSTKRLGVRLTPEDVAEAVWAAVQH  221 (260)
T ss_pred             EecCCcCCcccccccchhhh---hhHhhccCCCCHHHHHHHHHHHHhC
Confidence            99999999987641111110   0111122345899999999976643

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.2e-21  Score=161.39  Aligned_cols=195  Identities=18%  Similarity=0.174  Sum_probs=151.0

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.+|+++.+++.++++.+.+      .++++|++|||||...  +..+.+.+.|++++++|+.+++.+++.+++
T Consensus        55 ~~~~~~~~~D~~~~~~~~~~~~~~~~------~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  128 (260)
T PRK06198         55 GAKAVFVQADLSDVEDCRRVVAAADE------AFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIK  128 (260)
T ss_pred             CCeEEEEEccCCCHHHHHHHHHHHHH------HhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            44688899999999999999999988      5688999999999863  344668889999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|.++...+++|++||..+..                    +.+....|+.+|.+++.++++++.++.   ..+|+++++
T Consensus       129 ~~~~~~~~g~iv~~ss~~~~~--------------------~~~~~~~Y~~sK~a~~~~~~~~a~e~~---~~~i~v~~i  185 (260)
T PRK06198        129 LMRRRKAEGTIVNIGSMSAHG--------------------GQPFLAAYCASKGALATLTRNAAYALL---RNRIRVNGL  185 (260)
T ss_pred             HHHhcCCCCEEEEECCccccc--------------------CCCCcchhHHHHHHHHHHHHHHHHHhc---ccCeEEEEE
Confidence            997754358999999987632                    345567899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhH-----HHHHHH-HHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCccccC
Q 024553          168 DPGVVKTNIMREVPSF-----LSLMAF-TVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVNS  233 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~-----~~~~~~-~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~~~  233 (266)
                      +||++.|++.......     ..+... ....+++++.+|+++++.+++++... ...+|.++..+++..-.+
T Consensus       186 ~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~~~~~~~~  258 (260)
T PRK06198        186 NIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAFLLSDESGLMTGSVIDFDQSVWGAY  258 (260)
T ss_pred             eeccccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHHHHHHHHHHHcChhhCCccCceEeECCcccccC
Confidence            9999999874321110     011111 11223456679999999999655432 245798888777765544

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.88  E-value=3.1e-21  Score=162.11  Aligned_cols=183  Identities=22%  Similarity=0.259  Sum_probs=142.0

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.+|+++.+++.++++++.+      .++++|++|||||..  .+..+.+.+.|++++++|+.|++.+++.++|+
T Consensus        50 ~~~~~~~~D~~d~~~~~~~~~~~~~------~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~  123 (277)
T PRK06180         50 DRALARLLDVTDFDAIDAVVADAEA------TFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPG  123 (277)
T ss_pred             CCeeEEEccCCCHHHHHHHHHHHHH------HhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            4688999999999999999999988      568899999999986  34556678889999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |++++ .++||++||.++.                    .+.++...|+.+|++++.++++++.++.   ..+++++++.
T Consensus       124 ~~~~~-~~~iv~iSS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~i~  179 (277)
T PRK06180        124 MRARR-RGHIVNITSMGGL--------------------ITMPGIGYYCGSKFALEGISESLAKEVA---PFGIHVTAVE  179 (277)
T ss_pred             HhccC-CCEEEEEeccccc--------------------CCCCCcchhHHHHHHHHHHHHHHHHHhh---hhCcEEEEEe
Confidence            98876 6899999998763                    3456678899999999999999999987   7899999999


Q ss_pred             CCcccCCccCcc--------hhHHHHH-HH---HHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceee
Q 024553          169 PGVVKTNIMREV--------PSFLSLM-AF---TVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFF  224 (266)
Q Consensus       169 PG~v~T~~~~~~--------~~~~~~~-~~---~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~  224 (266)
                      ||++.|++....        ....... ..   ........+.+|+++|+.++.++..+ .....|+.
T Consensus       180 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~-~~~~~~~~  246 (277)
T PRK06180        180 PGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQAILAAVESD-EPPLHLLL  246 (277)
T ss_pred             cCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHcCC-CCCeeEec
Confidence            999999874321        1111111 00   01112234569999999999765433 33334443

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=2.4e-21  Score=160.35  Aligned_cols=188  Identities=19%  Similarity=0.209  Sum_probs=146.5

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.+|+++.+++.++++++.+      .++++|++|||||...  +..+.+.+.+++++++|+.+++.+++.+++.
T Consensus        56 ~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  129 (252)
T PRK06077         56 GEGIGVLADVSTREGCETLAKATID------RYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKE  129 (252)
T ss_pred             CeeEEEEeccCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHH
Confidence            4678999999999999999999998      6689999999999853  3445567778999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      +++   .++||++||..+.                    .+.++...|+++|++++.+++++++++.   + +++++.+.
T Consensus       130 ~~~---~~~iv~~sS~~~~--------------------~~~~~~~~Y~~sK~~~~~~~~~l~~~~~---~-~i~v~~v~  182 (252)
T PRK06077        130 MRE---GGAIVNIASVAGI--------------------RPAYGLSIYGAMKAAVINLTKYLALELA---P-KIRVNAIA  182 (252)
T ss_pred             hhc---CcEEEEEcchhcc--------------------CCCCCchHHHHHHHHHHHHHHHHHHHHh---c-CCEEEEEe
Confidence            976   4799999998863                    3566678899999999999999999995   4 99999999


Q ss_pred             CCcccCCccCcchhHHH--H-HHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          169 PGVVKTNIMREVPSFLS--L-MAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~--~-~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      ||+++|++.........  . .........+.+.+|+++|+.+++++. ++..+|..|..++|..+.
T Consensus       183 Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~-~~~~~g~~~~i~~g~~~~  248 (252)
T PRK06077        183 PGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAILK-IESITGQVFVLDSGESLK  248 (252)
T ss_pred             eCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHHHHHhC-ccccCCCeEEecCCeecc
Confidence            99999997543221110  0 001111223456799999999997654 344567666667776553

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.3e-21  Score=160.19  Aligned_cols=186  Identities=25%  Similarity=0.332  Sum_probs=142.4

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.||+++.+++..+++++.+      ..+++|++|||||...  +..+.+.+++++++++|+.+++.+++.++|+
T Consensus        52 ~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  125 (249)
T PRK06500         52 ESALVIRADAGDVAAQKALAQALAE------AFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPL  125 (249)
T ss_pred             CceEEEEecCCCHHHHHHHHHHHHH------HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            4688999999999999999999988      5689999999999763  3456678899999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |..   .+++|+++|..+.                    .+.+....|+.+|++++.++++++.++.   .++|+++.++
T Consensus       126 ~~~---~~~~i~~~S~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~i~  179 (249)
T PRK06500        126 LAN---PASIVLNGSINAH--------------------IGMPNSSVYAASKAALLSLAKTLSGELL---PRGIRVNAVS  179 (249)
T ss_pred             Hhc---CCEEEEEechHhc--------------------cCCCCccHHHHHHHHHHHHHHHHHHHhh---hcCeEEEEEe
Confidence            865   4689999887652                    2445567899999999999999999987   7899999999


Q ss_pred             CCcccCCccCcch--hH-HH-H-HHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCC
Q 024553          169 PGVVKTNIMREVP--SF-LS-L-MAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKG  228 (266)
Q Consensus       169 PG~v~T~~~~~~~--~~-~~-~-~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g  228 (266)
                      ||.++|++.....  .. .. . .......++.++.+|+++|+.+++++... ...+|.-+..++|
T Consensus       180 pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~gg  245 (249)
T PRK06500        180 PGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLASDESAFIVGSEIIVDGG  245 (249)
T ss_pred             eCcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCeEEECCC
Confidence            9999999764321  11 01 1 01111124456779999999999654321 2334555544444

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.2e-21  Score=158.82  Aligned_cols=184  Identities=19%  Similarity=0.187  Sum_probs=143.7

Q ss_pred             EEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           14 EAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        14 ~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      .++.+|+++.++++++++++.+      .. ++|++|||||...  +..+.+.+++++++++|+.+++.+++.++|.|++
T Consensus        44 ~~~~~D~~~~~~~~~~~~~~~~------~~-~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~  116 (234)
T PRK07577         44 ELFACDLADIEQTAATLAQINE------IH-PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKL  116 (234)
T ss_pred             eEEEeeCCCHHHHHHHHHHHHH------hC-CCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence            5789999999999999999987      43 6899999999864  3445678899999999999999999999999988


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCc
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV  171 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~  171 (266)
                      .+ .++||++||....                     +.+....|+.+|++++.++++++.++.   +.+|++++|+||+
T Consensus       117 ~~-~~~iv~~sS~~~~---------------------~~~~~~~Y~~sK~a~~~~~~~~a~e~~---~~gi~v~~i~pg~  171 (234)
T PRK07577        117 RE-QGRIVNICSRAIF---------------------GALDRTSYSAAKSALVGCTRTWALELA---EYGITVNAVAPGP  171 (234)
T ss_pred             cC-CcEEEEEcccccc---------------------CCCCchHHHHHHHHHHHHHHHHHHHHH---hhCcEEEEEecCc
Confidence            76 7899999997531                     234457899999999999999999997   7899999999999


Q ss_pred             ccCCccCcchhHHHH--HHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          172 VKTNIMREVPSFLSL--MAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       172 v~T~~~~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      +.|++.....+....  .......+++...+|+++|..+++++..+ ...+|.++..++|.
T Consensus       172 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g~~  232 (234)
T PRK07577        172 IETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAFLLSDDAGFITGQVLGVDGGG  232 (234)
T ss_pred             ccCcccccccccchhHHHHHhhcCCCCCCcCHHHHHHHHHHHhCcccCCccceEEEecCCc
Confidence            999987543221111  11111123344568999999999765443 34678888766654

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=2.8e-21  Score=159.35  Aligned_cols=188  Identities=25%  Similarity=0.312  Sum_probs=150.6

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.+|+++.+++.++++++.+      .++++|++|||||...  +..+.+.+++++++++|+.+++.+++.+++
T Consensus        54 ~~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  127 (247)
T PRK05565         54 GGDAIAVKADVSSEEDVENLVEQIVE------KFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALP  127 (247)
T ss_pred             CCeEEEEECCCCCHHHHHHHHHHHHH------HhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            34689999999999999999999988      5678999999999873  344667889999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .+.+.+ .+++|++||..+.                    .+.+....|+.+|.++..++++++.++.   ..+++++++
T Consensus       128 ~~~~~~-~~~~v~~sS~~~~--------------------~~~~~~~~y~~sK~a~~~~~~~~~~~~~---~~gi~~~~v  183 (247)
T PRK05565        128 YMIKRK-SGVIVNISSIWGL--------------------IGASCEVLYSASKGAVNAFTKALAKELA---PSGIRVNAV  183 (247)
T ss_pred             HHHhcC-CcEEEEECCHhhc--------------------cCCCCccHHHHHHHHHHHHHHHHHHHHH---HcCeEEEEE
Confidence            998776 6899999997752                    2344566799999999999999999987   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCC
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKG  228 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g  228 (266)
                      +||+++|++.+...+..... .....+.+.+.+|+++++.+++++... ...+|+++..++|
T Consensus       184 ~pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~~  244 (247)
T PRK05565        184 APGAIDTEMWSSFSEEDKEG-LAEEIPLGRLGKPEEIAKVVLFLASDDASYITGQIITVDGG  244 (247)
T ss_pred             EECCccCccccccChHHHHH-HHhcCCCCCCCCHHHHHHHHHHHcCCccCCccCcEEEecCC
Confidence            99999999887655432111 111223345669999999999766543 3567888876665

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.87  E-value=1.7e-21  Score=152.09  Aligned_cols=185  Identities=16%  Similarity=0.152  Sum_probs=155.5

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC------CCCcCCCcccchhhhhhhhhHHHHHHhh
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLL   85 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~------~~~~~~~~~~~~~~~~n~~~~~~l~~~~   85 (266)
                      ...+++||+++.++++++++++++      +++++|.|||+-|+..      ...+.+.|+|...+++...+...+.+++
T Consensus        57 s~~v~~cDV~~d~~i~~~f~~i~~------~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a  130 (259)
T COG0623          57 SDLVLPCDVTNDESIDALFATIKK------KWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAA  130 (259)
T ss_pred             CCeEEecCCCCHHHHHHHHHHHHH------hhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHH
Confidence            367899999999999999999999      8899999999999873      4567889999999999999999999999


Q ss_pred             HHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEE
Q 024553           86 LPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVI  165 (266)
Q Consensus        86 ~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~  165 (266)
                      .|+|..   +|.||.++--.+                    ++..|.+...+.+|++++.-+|.||.+++   +.|||||
T Consensus       131 ~~lM~~---ggSiltLtYlgs--------------------~r~vPnYNvMGvAKAaLEasvRyLA~dlG---~~gIRVN  184 (259)
T COG0623         131 RPLMNN---GGSILTLTYLGS--------------------ERVVPNYNVMGVAKAALEASVRYLAADLG---KEGIRVN  184 (259)
T ss_pred             HHhcCC---CCcEEEEEeccc--------------------eeecCCCchhHHHHHHHHHHHHHHHHHhC---ccCeEEe
Confidence            999987   679998887665                    56788888899999999999999999998   8899999


Q ss_pred             EecCCcccCCccCcchhHHHHHHH-HHHHHhhcCCCHHHHHHHHHHHhcCCCC---cccceeecCCCcc
Q 024553          166 AADPGVVKTNIMREVPSFLSLMAF-TVLKLLGLLQSPEKGINSVLDAALAPPE---TSGVYFFGGKGRT  230 (266)
Q Consensus       166 ~v~PG~v~T~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~a~~~~~~~~~~~~---~~G~~~~~~~g~~  230 (266)
                      +|+-|+|+|=...........+.. ....|+++..++++|+...+  +|.++-   .+|....++.|--
T Consensus       185 aISAGPIrTLAasgI~~f~~~l~~~e~~aPl~r~vt~eeVG~tA~--fLlSdLssgiTGei~yVD~G~~  251 (259)
T COG0623         185 AISAGPIRTLAASGIGDFRKMLKENEANAPLRRNVTIEEVGNTAA--FLLSDLSSGITGEIIYVDSGYH  251 (259)
T ss_pred             eecccchHHHHhhccccHHHHHHHHHhhCCccCCCCHHHhhhhHH--HHhcchhcccccceEEEcCCce
Confidence            999999999877776655544443 33458889999999999999  555653   4566554455543

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.87  E-value=2.3e-21  Score=160.92  Aligned_cols=190  Identities=21%  Similarity=0.201  Sum_probs=149.2

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.+++++.||+++.+++.++++++.+      ..+.+|++|||||...  +..+.+.++++.++++|+.+++.+++.+++
T Consensus        52 ~~~~~~~~~Dl~~~~~~~~~~~~~~~------~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  125 (258)
T PRK12429         52 GGKAIGVAMDVTDEEAINAGIDYAVE------TFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALP  125 (258)
T ss_pred             CCcEEEEEcCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHH
Confidence            45788999999999999999999988      6688999999999763  345667788999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++.+ .++||++||..+.                    .+.++...|+.+|+++..+++.++.++.   ..+|+++++
T Consensus       126 ~~~~~~-~~~iv~iss~~~~--------------------~~~~~~~~y~~~k~a~~~~~~~l~~~~~---~~~i~v~~~  181 (258)
T PRK12429        126 IMKAQG-GGRIINMASVHGL--------------------VGSAGKAAYVSAKHGLIGLTKVVALEGA---THGVTVNAI  181 (258)
T ss_pred             HHHhcC-CeEEEEEcchhhc--------------------cCCCCcchhHHHHHHHHHHHHHHHHHhc---ccCeEEEEE
Confidence            998876 7899999998763                    2456678899999999999999999987   789999999


Q ss_pred             cCCcccCCccCcchhH---------HHH--HHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          168 DPGVVKTNIMREVPSF---------LSL--MAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~---------~~~--~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      .||++.|++.......         ...  ..+....+.+.+.+++++|+.+++++... ...+|.+|..++|-
T Consensus       182 ~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~  255 (258)
T PRK12429        182 CPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLASFAAKGVTGQAWVVDGGW  255 (258)
T ss_pred             ecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHHHHHHHHHHcCccccCccCCeEEeCCCE
Confidence            9999999876432111         000  00111112345779999999998665433 24468888766653

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.87  E-value=5.6e-21  Score=157.70  Aligned_cols=186  Identities=22%  Similarity=0.258  Sum_probs=146.5

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhH-H
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLL-P   87 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~   87 (266)
                      .++.++.||+++.+++.++++++.+      ..+++|++|||||...  +..+.+.++|++++++|+.+++.+++.+. +
T Consensus        59 ~~~~~~~~Dl~~~~~~~~~~~~~~~------~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  132 (249)
T PRK12827         59 GKALGLAFDVRDFAATRAALDAGVE------EFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPP  132 (249)
T ss_pred             CcEEEEEccCCCHHHHHHHHHHHHH------HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence            4688999999999999999999988      5678999999999864  44566788899999999999999999999 6


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .+++++ .+++|++||..+..                    +.++...|+.+|+++..++++++.++.   +.+++++++
T Consensus       133 ~~~~~~-~~~iv~~sS~~~~~--------------------~~~~~~~y~~sK~a~~~~~~~l~~~~~---~~~i~~~~i  188 (249)
T PRK12827        133 MIRARR-GGRIVNIASVAGVR--------------------GNRGQVNYAASKAGLIGLTKTLANELA---PRGITVNAV  188 (249)
T ss_pred             HHhcCC-CeEEEEECCchhcC--------------------CCCCCchhHHHHHHHHHHHHHHHHHhh---hhCcEEEEE
Confidence            666555 68999999987632                    345567899999999999999999987   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  229 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~  229 (266)
                      +||+++|++..........   ....+.....+|+++++.+++++.. +...+|.++..++|.
T Consensus       189 ~pg~v~t~~~~~~~~~~~~---~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~g~  248 (249)
T PRK12827        189 APGAINTPMADNAAPTEHL---LNPVPVQRLGEPDEVAALVAFLVSDAASYVTGQVIPVDGGF  248 (249)
T ss_pred             EECCcCCCcccccchHHHH---HhhCCCcCCcCHHHHHHHHHHHcCcccCCccCcEEEeCCCC
Confidence            9999999987654322111   1112233455999999999865533 235568888766553

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.6e-21  Score=162.03  Aligned_cols=162  Identities=19%  Similarity=0.288  Sum_probs=135.1

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCC--C-CcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT--S-SRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~--~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      ++.++.||+++.+++.++++++.+      +.+.+|++|||||....  . ...+.+.+++++++|+.|++.+++.++|.
T Consensus        51 ~~~~~~~Dl~~~~~i~~~~~~~~~------~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~  124 (257)
T PRK07024         51 RVSVYAADVRDADALAAAAADFIA------AHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAP  124 (257)
T ss_pred             eeEEEEcCCCCHHHHHHHHHHHHH------hCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHH
Confidence            789999999999999999999988      67889999999998632  1 22566889999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |++++ .++||++||..+.                    .+.+....|+.+|+++..++++++.++.   ..+|++++++
T Consensus       125 ~~~~~-~~~iv~isS~~~~--------------------~~~~~~~~Y~asK~a~~~~~~~l~~e~~---~~gi~v~~v~  180 (257)
T PRK07024        125 MRAAR-RGTLVGIASVAGV--------------------RGLPGAGAYSASKAAAIKYLESLRVELR---PAGVRVVTIA  180 (257)
T ss_pred             HHhcC-CCEEEEEechhhc--------------------CCCCCCcchHHHHHHHHHHHHHHHHHhh---ccCcEEEEEe
Confidence            98876 7899999998863                    3456667899999999999999999997   7899999999


Q ss_pred             CCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Q 024553          169 PGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA  214 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~  214 (266)
                      ||+++|++........           ....+|+++++.++.++..
T Consensus       181 Pg~v~t~~~~~~~~~~-----------~~~~~~~~~a~~~~~~l~~  215 (257)
T PRK07024        181 PGYIRTPMTAHNPYPM-----------PFLMDADRFAARAARAIAR  215 (257)
T ss_pred             cCCCcCchhhcCCCCC-----------CCccCHHHHHHHHHHHHhC
Confidence            9999999764321100           0124899999999976643

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.87  E-value=1.8e-21  Score=151.83  Aligned_cols=184  Identities=22%  Similarity=0.230  Sum_probs=152.7

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCC-----cCCCcccchhhhhhhhhHHHHHHhh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS-----RLTPEGYDQMMSTNYIGAFFLTKLL   85 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~   85 (266)
                      ........|++...-...+++..+.      +.+..|++|||||..++..     ..+.+.|.+.+++|+++.+.+...+
T Consensus        54 d~~v~~~g~~~e~~~l~al~e~~r~------k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~  127 (253)
T KOG1204|consen   54 DDFVHVVGDITEEQLLGALREAPRK------KGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWA  127 (253)
T ss_pred             CCcceechHHHHHHHHHHHHhhhhh------cCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHH
Confidence            4566677788888888888888887      7789999999999986532     4467889999999999999999999


Q ss_pred             HHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEE
Q 024553           86 LPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVI  165 (266)
Q Consensus        86 ~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~  165 (266)
                      +|.+++++..+.+|++||.++                    .+++++|.+|+.+|+|.+++++.||.|=    +.+|++.
T Consensus       128 l~~lk~~p~~~~vVnvSS~aa--------------------v~p~~~wa~yc~~KaAr~m~f~~lA~EE----p~~v~vl  183 (253)
T KOG1204|consen  128 LPKLKKSPVNGNVVNVSSLAA--------------------VRPFSSWAAYCSSKAARNMYFMVLASEE----PFDVRVL  183 (253)
T ss_pred             HHHhcCCCccCeEEEecchhh--------------------hccccHHHHhhhhHHHHHHHHHHHhhcC----ccceeEE
Confidence            999999865789999999987                    6799999999999999999999999982    3599999


Q ss_pred             EecCCcccCCccCcchh-----HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceee
Q 024553          166 AADPGVVKTNIMREVPS-----FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFF  224 (266)
Q Consensus       166 ~v~PG~v~T~~~~~~~~-----~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~  224 (266)
                      .+.||.|+|++......     ......+..+...+.+.+|...|+.+..+++.....+|.|++
T Consensus       184 ~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~~ll~~~~~a~~l~~L~e~~~f~sG~~vd  247 (253)
T KOG1204|consen  184 NYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESGQLLDPQVTAKVLAKLLEKGDFVSGQHVD  247 (253)
T ss_pred             EccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcCCcCChhhHHHHHHHHHHhcCcccccccc
Confidence            99999999999754322     223344555566677889999999999877777677888765

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.87  E-value=5.3e-21  Score=157.70  Aligned_cols=189  Identities=21%  Similarity=0.200  Sum_probs=144.1

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC---CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      .++.++.||+++.+++.++++++.+      ..+++|++|||||...   +..+.+.++++.++++|+.+++.+++.+++
T Consensus        51 ~~~~~~~~D~~d~~~i~~~~~~~~~------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  124 (247)
T PRK09730         51 GKAFVLQADISDENQVVAMFTAIDQ------HDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVK  124 (247)
T ss_pred             CeEEEEEccCCCHHHHHHHHHHHHH------hCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            4688999999999999999999988      6789999999999752   345667788999999999999999999999


Q ss_pred             HHhcCC--CCCeEEEEcCCcccccccccCCccccccCcccCCCCCCh-hhcchHhHHHHHHHHHHHHHhhCCCCCCCeEE
Q 024553           88 LLKNSP--VPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPC-ARIYEYSKLCLLIFSYELHRNLGLDKSRHVSV  164 (266)
Q Consensus        88 ~l~~~~--~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v  164 (266)
                      .+.+..  .++++|++||..+..                    +.+. ...|+.+|++++.++++++.++.   +.++++
T Consensus       125 ~~~~~~~~~~g~~v~~sS~~~~~--------------------~~~~~~~~Y~~sK~~~~~~~~~l~~~~~---~~~i~v  181 (247)
T PRK09730        125 RMALKHGGSGGAIVNVSSAASRL--------------------GAPGEYVDYAASKGAIDTLTTGLSLEVA---AQGIRV  181 (247)
T ss_pred             HHHhcCCCCCcEEEEECchhhcc--------------------CCCCcccchHhHHHHHHHHHHHHHHHHH---HhCeEE
Confidence            987642  257899999987532                    2222 34699999999999999999987   789999


Q ss_pred             EEecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCC
Q 024553          165 IAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKG  228 (266)
Q Consensus       165 ~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g  228 (266)
                      ++++||+++|++.................++.+..+|+++|+.+++++... ...+|.++..++|
T Consensus       182 ~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g~  246 (247)
T PRK09730        182 NCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQPEEVAQAIVWLLSDKASYVTGSFIDLAGG  246 (247)
T ss_pred             EEEEeCCCcCcccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHhhcChhhcCccCcEEecCCC
Confidence            999999999997543211111111111123444569999999999655432 2467888876654

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.87  E-value=5.7e-21  Score=157.93  Aligned_cols=172  Identities=23%  Similarity=0.292  Sum_probs=135.8

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC---CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      .++.++.||+++.+++.++++++.+      .++++|++|||||..   .+..+.+.+++++++++|+.|++.+++.+++
T Consensus        46 ~~~~~~~~Dl~~~~~i~~~~~~~~~------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  119 (248)
T PRK10538         46 DNLYIAQLDVRNRAAIEEMLASLPA------EWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLP  119 (248)
T ss_pred             cceEEEEecCCCHHHHHHHHHHHHH------HcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            3688999999999999999999988      568899999999975   2445668889999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++.+ .++||++||..+.                    .++++...|+.+|++++.+++.++.++.   ..+|+++.+
T Consensus       120 ~~~~~~-~~~iv~isS~~~~--------------------~~~~~~~~Y~~sK~~~~~~~~~l~~~~~---~~~i~v~~v  175 (248)
T PRK10538        120 GMVERN-HGHIINIGSTAGS--------------------WPYAGGNVYGATKAFVRQFSLNLRTDLH---GTAVRVTDI  175 (248)
T ss_pred             HHHhcC-CcEEEEECCcccC--------------------CCCCCCchhHHHHHHHHHHHHHHHHHhc---CCCcEEEEE
Confidence            998766 6899999998752                    3455667899999999999999999997   789999999


Q ss_pred             cCCcccCCccCc--ch-hHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC
Q 024553          168 DPGVVKTNIMRE--VP-SFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP  215 (266)
Q Consensus       168 ~PG~v~T~~~~~--~~-~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~  215 (266)
                      .||.+.|+....  .. .........   .-....+|+++|+.+++++..+
T Consensus       176 ~pg~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~dvA~~~~~l~~~~  223 (248)
T PRK10538        176 EPGLVGGTEFSNVRFKGDDGKAEKTY---QNTVALTPEDVSEAVWWVATLP  223 (248)
T ss_pred             eCCeecccccchhhccCcHHHHHhhc---cccCCCCHHHHHHHHHHHhcCC
Confidence            999998443322  11 111000000   0112458999999999766544

>PRK09135 pteridine reductase; Provisional

Probab=99.87  E-value=7.8e-21  Score=156.85  Aligned_cols=189  Identities=20%  Similarity=0.220  Sum_probs=146.7

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      ..+.++.+|+++.+++.++++++.+      ..+++|++|||||...  +....+.+++++++++|+.|++.+++.+.+.
T Consensus        57 ~~~~~~~~Dl~~~~~~~~~~~~~~~------~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~  130 (249)
T PRK09135         57 GSAAALQADLLDPDALPELVAACVA------AFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQ  130 (249)
T ss_pred             CceEEEEcCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHH
Confidence            3588999999999999999999988      6688999999999763  3445567789999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      +.++  .+.+++++|..+                    ..+.++...|+.+|++++.+++.++.++.    ++++++++.
T Consensus       131 ~~~~--~~~~~~~~~~~~--------------------~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~----~~i~~~~v~  184 (249)
T PRK09135        131 LRKQ--RGAIVNITDIHA--------------------ERPLKGYPVYCAAKAALEMLTRSLALELA----PEVRVNAVA  184 (249)
T ss_pred             HhhC--CeEEEEEeChhh--------------------cCCCCCchhHHHHHHHHHHHHHHHHHHHC----CCCeEEEEE
Confidence            8765  468888877543                    23556678899999999999999999984    579999999


Q ss_pred             CCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCccc
Q 024553          169 PGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  231 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~  231 (266)
                      ||++.|+..................++....+++|+++++++++...+..+|..|..++|+.+
T Consensus       185 pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~g~~~~i~~g~~~  247 (249)
T PRK09135        185 PGAILWPEDGNSFDEEARQAILARTPLKRIGTPEDIAEAVRFLLADASFITGQILAVDGGRSL  247 (249)
T ss_pred             eccccCccccccCCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCccccccCcEEEECCCeec
Confidence            999999986432111111111112233455689999999986665544568998888887754

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.87  E-value=8.5e-21  Score=159.60  Aligned_cols=189  Identities=23%  Similarity=0.291  Sum_probs=144.0

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.+++.+ ++++.+      ..+++|++|||||...  ...+.+.+++++.+++|+.+++.+++.++|
T Consensus        53 ~~~~~~~~~D~~d~~~~~~-~~~~~~------~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  125 (280)
T PRK06914         53 QQNIKVQQLDVTDQNSIHN-FQLVLK------EIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLP  125 (280)
T ss_pred             CCceeEEecCCCCHHHHHH-HHHHHH------hcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            3578999999999999999 888877      6689999999999864  344567788999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++.+ .++||++||..+.                    .+.++...|+.+|++++.++++++.++.   +.+|+++.+
T Consensus       126 ~~~~~~-~~~iv~vsS~~~~--------------------~~~~~~~~Y~~sK~~~~~~~~~l~~~~~---~~~i~v~~v  181 (280)
T PRK06914        126 YMRKQK-SGKIINISSISGR--------------------VGFPGLSPYVSSKYALEGFSESLRLELK---PFGIDVALI  181 (280)
T ss_pred             HHHhcC-CCEEEEECccccc--------------------CCCCCCchhHHhHHHHHHHHHHHHHHhh---hhCCEEEEE
Confidence            998766 6899999997652                    2455667899999999999999999987   789999999


Q ss_pred             cCCcccCCccCcchh------H------H--HHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCccc
Q 024553          168 DPGVVKTNIMREVPS------F------L--SLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  231 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~------~------~--~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~  231 (266)
                      .||+++|++......      .      .  .........+.+++.+|+|+|+++++++..+..  +.+|..+.+..+
T Consensus       182 ~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~--~~~~~~~~~~~~  257 (280)
T PRK06914        182 EPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPIDVANLIVEIAESKRP--KLRYPIGKGVKL  257 (280)
T ss_pred             ecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHcCCCC--CcccccCCchHH
Confidence            999999997542110      0      0  000011112334567999999999976654432  244543444433

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.87  E-value=6.6e-21  Score=177.48  Aligned_cols=192  Identities=17%  Similarity=0.132  Sum_probs=149.4

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      ...+..+.||+++.+++.++++++.+      .++++|+||||||...  +..+.+.++|+.++++|+.+++.+++.+++
T Consensus       464 ~~~~~~v~~Dvtd~~~v~~a~~~i~~------~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~  537 (676)
T TIGR02632       464 AGRAVALKMDVTDEQAVKAAFADVAL------AYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFR  537 (676)
T ss_pred             CCcEEEEECCCCCHHHHHHHHHHHHH------hcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34688999999999999999999988      6789999999999863  445667889999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++++.+++||++||..+.                    .+.++...|+++|++++.++++++.++.   +.+|+||+|
T Consensus       538 ~m~~~~~~g~IV~iSS~~a~--------------------~~~~~~~aY~aSKaA~~~l~r~lA~el~---~~gIrVn~V  594 (676)
T TIGR02632       538 QMREQGLGGNIVFIASKNAV--------------------YAGKNASAYSAAKAAEAHLARCLAAEGG---TYGIRVNTV  594 (676)
T ss_pred             HHHhcCCCCEEEEEeChhhc--------------------CCCCCCHHHHHHHHHHHHHHHHHHHHhc---ccCeEEEEE
Confidence            99876546799999998762                    2455678899999999999999999997   789999999


Q ss_pred             cCCcccCC--ccCcch-----------hHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCcc
Q 024553          168 DPGVVKTN--IMREVP-----------SFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  230 (266)
Q Consensus       168 ~PG~v~T~--~~~~~~-----------~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~  230 (266)
                      +||.|.|+  +.....           .......+....++++..+|+++|+.+++++.. +...+|.++..++|..
T Consensus       595 ~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDGG~~  671 (676)
T TIGR02632       595 NPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPADIAEAVFFLASSKSEKTTGCIITVDGGVP  671 (676)
T ss_pred             ECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCch
Confidence            99998642  322110           000011122223456678999999999965432 2356799988777754

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.87  E-value=2e-21  Score=161.16  Aligned_cols=162  Identities=19%  Similarity=0.174  Sum_probs=131.1

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCc--CCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSR--LTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .+++++.||+++.+++.++++++.+      . +++|++|||+|...+...  .+.+...+++++|+.+++.+++.++|.
T Consensus        60 ~~v~~~~~D~~~~~~~~~~~~~~~~------~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~  132 (253)
T PRK07904         60 SSVEVIDFDALDTDSHPKVIDAAFA------G-GDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEK  132 (253)
T ss_pred             CceEEEEecCCChHHHHHHHHHHHh------c-CCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHH
Confidence            3789999999999999999998876      3 789999999998643221  122334568999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |++++ .++||++||..+..                    +.++...|+.||+++..++++++.++.   ..+|+++.++
T Consensus       133 ~~~~~-~~~iv~isS~~g~~--------------------~~~~~~~Y~~sKaa~~~~~~~l~~el~---~~~i~v~~v~  188 (253)
T PRK07904        133 MRAQG-FGQIIAMSSVAGER--------------------VRRSNFVYGSTKAGLDGFYLGLGEALR---EYGVRVLVVR  188 (253)
T ss_pred             HHhcC-CceEEEEechhhcC--------------------CCCCCcchHHHHHHHHHHHHHHHHHHh---hcCCEEEEEe
Confidence            99877 78999999987622                    334456799999999999999999997   7899999999


Q ss_pred             CCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC
Q 024553          169 PGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP  215 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~  215 (266)
                      ||+++|++.......            ....+|+++|+.++.++..+
T Consensus       189 Pg~v~t~~~~~~~~~------------~~~~~~~~~A~~i~~~~~~~  223 (253)
T PRK07904        189 PGQVRTRMSAHAKEA------------PLTVDKEDVAKLAVTAVAKG  223 (253)
T ss_pred             eCceecchhccCCCC------------CCCCCHHHHHHHHHHHHHcC
Confidence            999999987653211            01348999999999776543

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.7e-20  Score=157.36  Aligned_cols=171  Identities=22%  Similarity=0.243  Sum_probs=135.5

Q ss_pred             EEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           13 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        13 ~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      +.++.||+++.+++.++++++.+      .++++|++|||||..  .+..+.+.+++++++++|+.|++.+++.++|.|+
T Consensus        46 ~~~~~~Dl~~~~~~~~~~~~~~~------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~  119 (274)
T PRK05693         46 FTAVQLDVNDGAALARLAEELEA------EHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLR  119 (274)
T ss_pred             CeEEEeeCCCHHHHHHHHHHHHH------hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence            67899999999999999999988      668999999999976  3455678889999999999999999999999997


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                      +.  .++||++||..+..                    +.+....|+.+|++++.++++++.++.   +.+|+|++++||
T Consensus       120 ~~--~g~iv~isS~~~~~--------------------~~~~~~~Y~~sK~al~~~~~~l~~e~~---~~gi~v~~v~pg  174 (274)
T PRK05693        120 RS--RGLVVNIGSVSGVL--------------------VTPFAGAYCASKAAVHALSDALRLELA---PFGVQVMEVQPG  174 (274)
T ss_pred             hc--CCEEEEECCccccC--------------------CCCCccHHHHHHHHHHHHHHHHHHHhh---hhCeEEEEEecC
Confidence            64  47999999987632                    345567899999999999999999997   789999999999


Q ss_pred             cccCCccCcchhHHH--------HHH--HHHHHH----hhcCCCHHHHHHHHHHHhcC
Q 024553          171 VVKTNIMREVPSFLS--------LMA--FTVLKL----LGLLQSPEKGINSVLDAALA  214 (266)
Q Consensus       171 ~v~T~~~~~~~~~~~--------~~~--~~~~~~----~~~~~~p~~~a~~~~~~~~~  214 (266)
                      +|+|++..+......        +..  ......    .....+|+++|+.++.++..
T Consensus       175 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~  232 (274)
T PRK05693        175 AIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFARQLLAAVQQ  232 (274)
T ss_pred             ccccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHhC
Confidence            999998765321100        000  000000    11235899999999987654

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.87  E-value=7.4e-21  Score=156.71  Aligned_cols=179  Identities=23%  Similarity=0.307  Sum_probs=138.1

Q ss_pred             CccEEEEEecCCCHHHHHHHHHH-HHHhhccCCCCCCcceeeEcCCCCC---CCCcCCCcccchhhhhhhhhHHHHHHhh
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDS-LQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLL   85 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~-i~~~~~~~~~~~~ld~lv~nAG~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~   85 (266)
                      +.++.++.+|+++.+++++++++ +.+.+.   ..+++|++|||||...   +..+.+.+++++.+++|+.+++.+++.+
T Consensus        44 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~  120 (243)
T PRK07023         44 GERLAEVELDLSDAAAAAAWLAGDLLAAFV---DGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAAL  120 (243)
T ss_pred             CCeEEEEEeccCCHHHHHHHHHHHHHHHhc---cCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHH
Confidence            34788999999999999998776 544221   2257999999999863   3456678899999999999999999999


Q ss_pred             HHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEE
Q 024553           86 LPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVI  165 (266)
Q Consensus        86 ~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~  165 (266)
                      ++.|.+++ .++||++||..+.                    .+.++...|+.+|++++.+++.++.+ .   ..+|+++
T Consensus       121 ~~~~~~~~-~~~iv~isS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~~~~~-~---~~~i~v~  175 (243)
T PRK07023        121 AQAASDAA-ERRILHISSGAAR--------------------NAYAGWSVYCATKAALDHHARAVALD-A---NRALRIV  175 (243)
T ss_pred             HHHhhccC-CCEEEEEeChhhc--------------------CCCCCchHHHHHHHHHHHHHHHHHhc-C---CCCcEEE
Confidence            99998765 7899999998763                    35667788999999999999999999 5   7899999


Q ss_pred             EecCCcccCCccCcchhH-----HHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC
Q 024553          166 AADPGVVKTNIMREVPSF-----LSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP  216 (266)
Q Consensus       166 ~v~PG~v~T~~~~~~~~~-----~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~  216 (266)
                      .|+||+++|++.......     .....+....+.+++.+|+++|+.++..++.++
T Consensus       176 ~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~~  231 (243)
T PRK07023        176 SLAPGVVDTGMQATIRATDEERFPMRERFRELKASGALSTPEDAARRLIAYLLSDD  231 (243)
T ss_pred             EecCCccccHHHHHHHhcccccchHHHHHHHhhhcCCCCCHHHHHHHHHHHHhccc
Confidence            999999999975422110     011112223345677899999997775555443

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.3e-20  Score=158.19  Aligned_cols=189  Identities=20%  Similarity=0.238  Sum_probs=142.7

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.+|+++.+++.++++++.+      ..+++|+||||||...  +..+.+.+++++.+++|+.+++.+++.++|+
T Consensus        48 ~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~  121 (276)
T PRK06482         48 DRLWVLQLDVTDSAAVRAVVDRAFA------ALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPH  121 (276)
T ss_pred             CceEEEEccCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            3688999999999999999999887      5688999999999863  3445567889999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |++.+ .++||++||..+.                    .+.++...|+.+|++++.++++++.++.   +.+++++.+.
T Consensus       122 ~~~~~-~~~iv~~sS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~l~~~~~---~~gi~v~~v~  177 (276)
T PRK06482        122 LRRQG-GGRIVQVSSEGGQ--------------------IAYPGFSLYHATKWGIEGFVEAVAQEVA---PFGIEFTIVE  177 (276)
T ss_pred             HHhcC-CCEEEEEcCcccc--------------------cCCCCCchhHHHHHHHHHHHHHHHHHhh---ccCcEEEEEe
Confidence            98766 6899999998752                    2455678899999999999999999987   7899999999


Q ss_pred             CCcccCCccCcchh--------HHH---HHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCccc
Q 024553          169 PGVVKTNIMREVPS--------FLS---LMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  231 (266)
Q Consensus       169 PG~v~T~~~~~~~~--------~~~---~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~  231 (266)
                      ||.+.|++......        ...   .........+.....|++++++++.++..+  ..+..|..+.+...
T Consensus       178 pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~a~~~~~~~~--~~~~~~~~g~~~~~  249 (276)
T PRK06482        178 PGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAIPGDPQKMVQAMIASADQT--PAPRRLTLGSDAYA  249 (276)
T ss_pred             CCccccCCcccccccCCCccccchhhHHHHHHHhhccCCCCCCHHHHHHHHHHHHcCC--CCCeEEecChHHHH
Confidence            99999987643211        000   100111111122358999999999765433  22333554544433

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.86  E-value=7.5e-21  Score=160.97  Aligned_cols=166  Identities=20%  Similarity=0.230  Sum_probs=134.1

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCC--CCcC--CCcccchhhhhhhhhHHHHHHhh
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT--SSRL--TPEGYDQMMSTNYIGAFFLTKLL   85 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~--~~~~--~~~~~~~~~~~n~~~~~~l~~~~   85 (266)
                      +.++.++.+|+++.+++.++++++.+      ..+++|++|||||....  ..+.  +.++++.++++|+.|++.+++.+
T Consensus        88 ~~~~~~~~~Dl~d~~~v~~~~~~~~~------~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~  161 (293)
T PRK05866         88 GGDAMAVPCDLSDLDAVDALVADVEK------RIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGL  161 (293)
T ss_pred             CCcEEEEEccCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHH
Confidence            34688999999999999999999988      66899999999998632  2221  34677899999999999999999


Q ss_pred             HHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEE
Q 024553           86 LPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVI  165 (266)
Q Consensus        86 ~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~  165 (266)
                      +|.|++.+ .++||++||.++..                   ...+....|+++|+++..++++++.++.   ..+|+++
T Consensus       162 ~~~~~~~~-~g~iv~isS~~~~~-------------------~~~p~~~~Y~asKaal~~l~~~la~e~~---~~gI~v~  218 (293)
T PRK05866        162 APGMLERG-DGHIINVATWGVLS-------------------EASPLFSVYNASKAALSAVSRVIETEWG---DRGVHST  218 (293)
T ss_pred             HHHHHhcC-CcEEEEECChhhcC-------------------CCCCCcchHHHHHHHHHHHHHHHHHHhc---ccCcEEE
Confidence            99998876 78999999975421                   1244567899999999999999999997   7899999


Q ss_pred             EecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Q 024553          166 AADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA  214 (266)
Q Consensus       166 ~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~  214 (266)
                      +++||+++|++........         .. ...+|+++|+.++.++..
T Consensus       219 ~v~pg~v~T~~~~~~~~~~---------~~-~~~~pe~vA~~~~~~~~~  257 (293)
T PRK05866        219 TLYYPLVATPMIAPTKAYD---------GL-PALTADEAAEWMVTAART  257 (293)
T ss_pred             EEEcCcccCcccccccccc---------CC-CCCCHHHHHHHHHHHHhc
Confidence            9999999999875421100         01 134999999999977654

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.86  E-value=9.6e-21  Score=156.44  Aligned_cols=166  Identities=16%  Similarity=0.247  Sum_probs=137.4

Q ss_pred             ccCCCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHH
Q 024553            6 SRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTK   83 (266)
Q Consensus         6 ~~~~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~   83 (266)
                      ..+++.+++++.||+++.+++.++++++.+      ..+++|++|||||+..  +..+.+.+.+++++++|+.+++.+++
T Consensus        48 ~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  121 (248)
T PRK08251         48 ARYPGIKVAVAALDVNDHDQVFEVFAEFRD------ELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCE  121 (248)
T ss_pred             hhCCCceEEEEEcCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHH
Confidence            344566899999999999999999999988      6689999999999863  33455677788999999999999999


Q ss_pred             hhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCC-hhhcchHhHHHHHHHHHHHHHhhCCCCCCCe
Q 024553           84 LLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYP-CARIYEYSKLCLLIFSYELHRNLGLDKSRHV  162 (266)
Q Consensus        84 ~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i  162 (266)
                      .+++.+++.+ .++||++||..+..                    +.+ ....|+.+|+++..+++.++.++.   ..++
T Consensus       122 ~~~~~~~~~~-~~~iv~~sS~~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~l~~~~~---~~~i  177 (248)
T PRK08251        122 AAMEIFREQG-SGHLVLISSVSAVR--------------------GLPGVKAAYAASKAGVASLGEGLRAELA---KTPI  177 (248)
T ss_pred             HHHHHHHhcC-CCeEEEEecccccc--------------------CCCCCcccHHHHHHHHHHHHHHHHHHhc---ccCc
Confidence            9999998766 78999999987632                    233 256799999999999999999997   7899


Q ss_pred             EEEEecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Q 024553          163 SVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAAL  213 (266)
Q Consensus       163 ~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~  213 (266)
                      +++.|+||+++|++.......            ....+|+++|+.++.++.
T Consensus       178 ~v~~v~pg~v~t~~~~~~~~~------------~~~~~~~~~a~~i~~~~~  216 (248)
T PRK08251        178 KVSTIEPGYIRSEMNAKAKST------------PFMVDTETGVKALVKAIE  216 (248)
T ss_pred             EEEEEecCcCcchhhhccccC------------CccCCHHHHHHHHHHHHh
Confidence            999999999999987653221            123589999999987664

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.86  E-value=5.3e-21  Score=157.37  Aligned_cols=168  Identities=23%  Similarity=0.279  Sum_probs=137.6

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.||+++.+++.++++++.+      .++++|++|||||...  +..+.+.+++++++++|+.+++.+++.+++.
T Consensus        55 ~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  128 (241)
T PRK07454         55 VKAAAYSIDLSNPEAIAPGIAELLE------QFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPG  128 (241)
T ss_pred             CcEEEEEccCCCHHHHHHHHHHHHH------HcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHH
Confidence            4688999999999999999999988      6789999999999863  3456677889999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |.+++ .++||++||..+.                    .+.+....|+.+|++++.++++++.++.   ..+++++.|.
T Consensus       129 ~~~~~-~~~iv~isS~~~~--------------------~~~~~~~~Y~~sK~~~~~~~~~~a~e~~---~~gi~v~~i~  184 (241)
T PRK07454        129 MRARG-GGLIINVSSIAAR--------------------NAFPQWGAYCVSKAALAAFTKCLAEEER---SHGIRVCTIT  184 (241)
T ss_pred             HHhcC-CcEEEEEccHHhC--------------------cCCCCccHHHHHHHHHHHHHHHHHHHhh---hhCCEEEEEe
Confidence            98776 6899999998763                    2455567899999999999999999987   7899999999


Q ss_pred             CCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC
Q 024553          169 PGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP  215 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~  215 (266)
                      ||++.|++..........       ......+|+++|+.+++++..+
T Consensus       185 pg~i~t~~~~~~~~~~~~-------~~~~~~~~~~va~~~~~l~~~~  224 (241)
T PRK07454        185 LGAVNTPLWDTETVQADF-------DRSAMLSPEQVAQTILHLAQLP  224 (241)
T ss_pred             cCcccCCccccccccccc-------ccccCCCHHHHHHHHHHHHcCC
Confidence            999999985431110000       0123469999999999765443

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.86  E-value=9.7e-21  Score=156.96  Aligned_cols=192  Identities=28%  Similarity=0.316  Sum_probs=144.0

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.+|+++.+++.++++++.+.+......+++|++|||||...  +..+.+.+.|+.++++|+.+++.+++.+++.
T Consensus        56 ~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  135 (254)
T PRK12746         56 GKAFLIEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPL  135 (254)
T ss_pred             CcEEEEEcCcCCHHHHHHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            46889999999999999999999873311000147999999999863  3445677889999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |.+   .+++|++||..+.                    .+.++...|+.+|++++.++++++.++.   ..+++++.++
T Consensus       136 ~~~---~~~~v~~sS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~~~~~~~---~~~i~v~~v~  189 (254)
T PRK12746        136 LRA---EGRVINISSAEVR--------------------LGFTGSIAYGLSKGALNTMTLPLAKHLG---ERGITVNTIM  189 (254)
T ss_pred             hhc---CCEEEEECCHHhc--------------------CCCCCCcchHhhHHHHHHHHHHHHHHHh---hcCcEEEEEE
Confidence            865   4699999998763                    2455667899999999999999999987   7899999999


Q ss_pred             CCcccCCccCcchhHHHH-HHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCC
Q 024553          169 PGVVKTNIMREVPSFLSL-MAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKG  228 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g  228 (266)
                      ||++.|++.......... ........+++..+++++|+.+.+++... ...+|..|..++|
T Consensus       190 pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~~~  251 (254)
T PRK12746        190 PGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADAVAFLASSDSRWVTGQIIDVSGG  251 (254)
T ss_pred             ECCccCcchhhhccChhHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcccCCcCCCEEEeCCC
Confidence            999999987543221111 11111223456679999999998544332 1236777765554

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.86  E-value=3.5e-20  Score=155.46  Aligned_cols=174  Identities=18%  Similarity=0.171  Sum_probs=137.2

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.+|+++.+++.++++++.+      ..+++|++|||||...  +..+.+.+.+++++++|+.+++.+++.+++.
T Consensus        59 ~~~~~~~~Dl~~~~~~~~~~~~~~~------~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~  132 (274)
T PRK07775         59 GEAVAFPLDVTDPDSVKSFVAQAEE------ALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPG  132 (274)
T ss_pred             CeEEEEECCCCCHHHHHHHHHHHHH------hcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            4688999999999999999999988      6688999999999863  3445677889999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      +++++ .++||++||..+..                    +.+....|+.+|++++.++++++.++.   ..+|++++++
T Consensus       133 ~~~~~-~g~iv~isS~~~~~--------------------~~~~~~~Y~~sK~a~~~l~~~~~~~~~---~~gi~v~~v~  188 (274)
T PRK07775        133 MIERR-RGDLIFVGSDVALR--------------------QRPHMGAYGAAKAGLEAMVTNLQMELE---GTGVRASIVH  188 (274)
T ss_pred             HHhcC-CceEEEECChHhcC--------------------CCCCcchHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEe
Confidence            98765 68999999987532                    334556799999999999999999987   6899999999


Q ss_pred             CCcccCCccCcchhHHHH-HHHH-H---HHHhhcCCCHHHHHHHHHHHhcC
Q 024553          169 PGVVKTNIMREVPSFLSL-MAFT-V---LKLLGLLQSPEKGINSVLDAALA  214 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~-~~~~-~---~~~~~~~~~p~~~a~~~~~~~~~  214 (266)
                      ||+++|++.......... .... .   ....+.+.+|+++|+++++++..
T Consensus       189 pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~  239 (274)
T PRK07775        189 PGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLARAITFVAET  239 (274)
T ss_pred             CCcccCcccccCChhhhhHHHHHHHHhcccccccccCHHHHHHHHHHHhcC
Confidence            999999875443221111 0000 0   01123467999999999966543

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.6e-20  Score=156.01  Aligned_cols=195  Identities=20%  Similarity=0.208  Sum_probs=150.0

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.+|+++.+++..+++++.+      +++++|++|||||...  +..+.+.+.|+..+++|+.+++.+++.+++
T Consensus        48 ~~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  121 (257)
T PRK07074         48 DARFVPVACDLTDAASLAAALANAAA------ERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLE  121 (257)
T ss_pred             CCceEEEEecCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            34688999999999999999999988      5678999999999864  344567788999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .+++++ .++||++||..+..                     ..+...|+.+|++++.++++++.++.   +.+++++.+
T Consensus       122 ~~~~~~-~~~iv~~sS~~~~~---------------------~~~~~~y~~sK~a~~~~~~~~a~~~~---~~gi~v~~v  176 (257)
T PRK07074        122 GMLKRS-RGAVVNIGSVNGMA---------------------ALGHPAYSAAKAGLIHYTKLLAVEYG---RFGIRANAV  176 (257)
T ss_pred             HHHHcC-CeEEEEEcchhhcC---------------------CCCCcccHHHHHHHHHHHHHHHHHHh---HhCeEEEEE
Confidence            998766 68999999976421                     12345799999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHH-HHHH-HHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCccccCCc
Q 024553          168 DPGVVKTNIMREVPSFL-SLMA-FTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVNSSA  235 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~-~~~~-~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~~~~~  235 (266)
                      .||+++|++........ .... .....+...+..|+|+++++++++.. ....+|..+..++|......+
T Consensus       177 ~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~  247 (257)
T PRK07074        177 APGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLASPAARAITGVCLPVDGGLTAGNRE  247 (257)
T ss_pred             EeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCcCCcEEEeCCCcCcCChh
Confidence            99999998754321111 1111 11122345678999999999965532 235578888777776665433

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=2.1e-20  Score=154.02  Aligned_cols=189  Identities=21%  Similarity=0.280  Sum_probs=150.9

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.||+++.+++.++++++.+      ..+++|++||+||...  +..+.+.+++++++++|+.+.+.+++.++++
T Consensus        56 ~~~~~~~~D~~~~~~v~~~~~~~~~------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  129 (249)
T PRK12825         56 RRAQAVQADVTDKAALEAAVAAAVE------RFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPP  129 (249)
T ss_pred             CceEEEECCcCCHHHHHHHHHHHHH------HcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            4688999999999999999999988      5678999999999763  3345678889999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      +++.+ .+++|++||..+.                    .+......|+.+|+++..+++.+++++.   ..+++++.++
T Consensus       130 ~~~~~-~~~~i~~SS~~~~--------------------~~~~~~~~y~~sK~~~~~~~~~~~~~~~---~~~i~~~~i~  185 (249)
T PRK12825        130 MRKQR-GGRIVNISSVAGL--------------------PGWPGRSNYAAAKAGLVGLTKALARELA---EYGITVNMVA  185 (249)
T ss_pred             HHhcC-CCEEEEECccccC--------------------CCCCCchHHHHHHHHHHHHHHHHHHHHh---hcCeEEEEEE
Confidence            98876 6899999998763                    2344567899999999999999999986   6799999999


Q ss_pred             CCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCcc
Q 024553          169 PGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  230 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~  230 (266)
                      ||++.|++............ ....+.+++.+++++++.+.+++... ...+|.+|..++|..
T Consensus       186 pg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~i~~g~~  247 (249)
T PRK12825        186 PGDIDTDMKEATIEEAREAK-DAETPLGRSGTPEDIARAVAFLCSDASDYITGQVIEVTGGVD  247 (249)
T ss_pred             ECCccCCccccccchhHHhh-hccCCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCCEe
Confidence            99999998765432221111 11234455679999999999665332 245799998877754

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.86  E-value=4.6e-21  Score=147.21  Aligned_cols=142  Identities=26%  Similarity=0.337  Sum_probs=124.5

Q ss_pred             hhhcccCCCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCC----CcCCCcccchhhhhhhhh
Q 024553            2 ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS----SRLTPEGYDQMMSTNYIG   77 (266)
Q Consensus         2 ~~i~~~~~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~----~~~~~~~~~~~~~~n~~~   77 (266)
                      ++..+..|  .++.+.||+.|.++++++++.+++      .++.++++|||||++...    .+...++.++.+.+|+++
T Consensus        43 ~e~~~~~p--~~~t~v~Dv~d~~~~~~lvewLkk------~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~A  114 (245)
T COG3967          43 AEAKAENP--EIHTEVCDVADRDSRRELVEWLKK------EYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLA  114 (245)
T ss_pred             HHHHhcCc--chheeeecccchhhHHHHHHHHHh------hCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhh
Confidence            34444443  588999999999999999999999      789999999999998532    234566788999999999


Q ss_pred             HHHHHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCC
Q 024553           78 AFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLD  157 (266)
Q Consensus        78 ~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~  157 (266)
                      ++.++..++|++.+++ .+.||+|||+.++.                    +......|+++|++++.++.+|..++.  
T Consensus       115 PI~Lt~~~lphl~~q~-~a~IInVSSGLafv--------------------Pm~~~PvYcaTKAaiHsyt~aLR~Qlk--  171 (245)
T COG3967         115 PIRLTALLLPHLLRQP-EATIINVSSGLAFV--------------------PMASTPVYCATKAAIHSYTLALREQLK--  171 (245)
T ss_pred             HHHHHHHHHHHHHhCC-CceEEEeccccccC--------------------cccccccchhhHHHHHHHHHHHHHHhh--
Confidence            9999999999999988 89999999999843                    677778899999999999999999997  


Q ss_pred             CCCCeEEEEecCCcccCC
Q 024553          158 KSRHVSVIAADPGVVKTN  175 (266)
Q Consensus       158 ~~~~i~v~~v~PG~v~T~  175 (266)
                       ..+|.|.-+.|..|+|.
T Consensus       172 -~t~veVIE~~PP~V~t~  188 (245)
T COG3967         172 -DTSVEVIELAPPLVDTT  188 (245)
T ss_pred             -hcceEEEEecCCceecC
Confidence             77999999999999996

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.3e-20  Score=153.88  Aligned_cols=181  Identities=16%  Similarity=0.164  Sum_probs=136.9

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.+++++.||+++.+++.++++++          +++|++|||||...  +..+.+.+++++++++|+.+++.+++  .+
T Consensus        44 ~~~~~~~~~Dl~~~~~~~~~~~~~----------~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~  111 (230)
T PRK07041         44 GAPVRTAALDITDEAAVDAFFAEA----------GPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR--AA  111 (230)
T ss_pred             CCceEEEEccCCCHHHHHHHHHhc----------CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh--hh
Confidence            346889999999999998887643          57999999999863  34566788999999999999999999  44


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .+.+   .++||++||..+.                    .+.+....|+.+|++++.++++++.++.     +|+++.+
T Consensus       112 ~~~~---~g~iv~~ss~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~-----~irv~~i  163 (230)
T PRK07041        112 RIAP---GGSLTFVSGFAAV--------------------RPSASGVLQGAINAALEALARGLALELA-----PVRVNTV  163 (230)
T ss_pred             hhcC---CeEEEEECchhhc--------------------CCCCcchHHHHHHHHHHHHHHHHHHHhh-----CceEEEE
Confidence            4533   6899999998863                    2455667899999999999999999984     3999999


Q ss_pred             cCCcccCCccCcchhHHH--HHH-HHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCccc
Q 024553          168 DPGVVKTNIMREVPSFLS--LMA-FTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  231 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~--~~~-~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~  231 (266)
                      +||+++|++.........  ... .....+.+++.+|+++|+.+++++. ....+|..+..++|..+
T Consensus       164 ~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~G~~~~v~gg~~~  229 (230)
T PRK07041        164 SPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAA-NGFTTGSTVLVDGGHAI  229 (230)
T ss_pred             eecccccHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhc-CCCcCCcEEEeCCCeec
Confidence            999999998654322111  111 1111133456689999999997554 34567888777777543

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=1.2e-20  Score=169.09  Aligned_cols=187  Identities=18%  Similarity=0.199  Sum_probs=146.1

Q ss_pred             EEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           13 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        13 ~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      ..++.||+++.+++.++++++.+      .++++|++|||||+..  +..+.+.+.|+.++++|+.+++.+++.+++.+.
T Consensus       258 ~~~~~~Dv~~~~~~~~~~~~~~~------~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~  331 (450)
T PRK08261        258 GTALALDITAPDAPARIAEHLAE------RHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGA  331 (450)
T ss_pred             CeEEEEeCCCHHHHHHHHHHHHH------hCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhh
Confidence            35789999999999999999988      6689999999999873  345678899999999999999999999999655


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                      ... .++||++||..+.                    .+.++...|+.+|+++..++++++.++.   ..+|++++|+||
T Consensus       332 ~~~-~g~iv~~SS~~~~--------------------~g~~~~~~Y~asKaal~~~~~~la~el~---~~gi~v~~v~PG  387 (450)
T PRK08261        332 LGD-GGRIVGVSSISGI--------------------AGNRGQTNYAASKAGVIGLVQALAPLLA---ERGITINAVAPG  387 (450)
T ss_pred             hcC-CCEEEEECChhhc--------------------CCCCCChHHHHHHHHHHHHHHHHHHHHh---hhCcEEEEEEeC
Confidence            444 6899999998763                    2445667899999999999999999997   789999999999


Q ss_pred             cccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCcc
Q 024553          171 VVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  230 (266)
Q Consensus       171 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~  230 (266)
                      +++|++....+...... ......+.+...|+++|+.+++++.. +...+|..+..+++..
T Consensus       388 ~i~t~~~~~~~~~~~~~-~~~~~~l~~~~~p~dva~~~~~l~s~~~~~itG~~i~v~g~~~  447 (450)
T PRK08261        388 FIETQMTAAIPFATREA-GRRMNSLQQGGLPVDVAETIAWLASPASGGVTGNVVRVCGQSL  447 (450)
T ss_pred             cCcchhhhccchhHHHH-HhhcCCcCCCCCHHHHHHHHHHHhChhhcCCCCCEEEECCCcc
Confidence            99999876543321111 11112334556899999999954421 1245788887666543

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.86  E-value=4.2e-22  Score=148.80  Aligned_cols=185  Identities=17%  Similarity=0.233  Sum_probs=149.5

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCC--------CCcCCCcccchhhhhhhhhHHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT--------SSRLTPEGYDQMMSTNYIGAFFL   81 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~--------~~~~~~~~~~~~~~~n~~~~~~l   81 (266)
                      ++++.|.++|++++++++.++...+.      +++++|++|||||+..-        ....+.|++++++++|++|+|++
T Consensus        54 g~~~vf~padvtsekdv~aala~ak~------kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnv  127 (260)
T KOG1199|consen   54 GGKVVFTPADVTSEKDVRAALAKAKA------KFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNV  127 (260)
T ss_pred             CCceEEeccccCcHHHHHHHHHHHHh------hccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeee
Confidence            56899999999999999999999998      78999999999998631        23457889999999999999999


Q ss_pred             HHhhHHHHhcC-----CCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCC
Q 024553           82 TKLLLPLLKNS-----PVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGL  156 (266)
Q Consensus        82 ~~~~~~~l~~~-----~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~  156 (266)
                      ++...-.|-..     ++.|.||++.|.+++                    .+..+..+|++||.++..|+.-+++.+. 
T Consensus       128 irl~aglmg~nepdq~gqrgviintasvaaf--------------------dgq~gqaaysaskgaivgmtlpiardla-  186 (260)
T KOG1199|consen  128 IRLGAGLMGENEPDQNGQRGVIINTASVAAF--------------------DGQTGQAAYSASKGAIVGMTLPIARDLA-  186 (260)
T ss_pred             eeehhhhhcCCCCCCCCcceEEEeeceeeee--------------------cCccchhhhhcccCceEeeechhhhhcc-
Confidence            99999988654     246899999999973                    3566778999999999999999999998 


Q ss_pred             CCCCCeEEEEecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceee
Q 024553          157 DKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFF  224 (266)
Q Consensus       157 ~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~  224 (266)
                        ..+|+++.|.||.++||+....+.....+.-...+.-.|+..|.|.+..+- ++...+.-+|..+.
T Consensus       187 --~~gir~~tiapglf~tpllsslpekv~~fla~~ipfpsrlg~p~eyahlvq-aiienp~lngevir  251 (260)
T KOG1199|consen  187 --GDGIRFNTIAPGLFDTPLLSSLPEKVKSFLAQLIPFPSRLGHPHEYAHLVQ-AIIENPYLNGEVIR  251 (260)
T ss_pred             --cCceEEEeecccccCChhhhhhhHHHHHHHHHhCCCchhcCChHHHHHHHH-HHHhCcccCCeEEE
Confidence              899999999999999999998877654333222121235679999987665 45555555555543

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.86  E-value=9.3e-21  Score=151.52  Aligned_cols=161  Identities=12%  Similarity=0.116  Sum_probs=126.9

Q ss_pred             EEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcC
Q 024553           15 AFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS   92 (266)
Q Consensus        15 ~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~   92 (266)
                      .+.||+++.+++++++++          .+++|++|||||...  +..+.+.++|++++++|+.+++.+++.++|+|++ 
T Consensus        35 ~~~~D~~~~~~~~~~~~~----------~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-  103 (199)
T PRK07578         35 DVQVDITDPASIRALFEK----------VGKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND-  103 (199)
T ss_pred             ceEecCCChHHHHHHHHh----------cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence            568999999999888763          357999999999753  3456778899999999999999999999999975 


Q ss_pred             CCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcc
Q 024553           93 PVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVV  172 (266)
Q Consensus        93 ~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v  172 (266)
                        .++|+++||..+.                    .+.+....|+++|+++..++++++.++    +.+|+++.|+||++
T Consensus       104 --~g~iv~iss~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~----~~gi~v~~i~Pg~v  157 (199)
T PRK07578        104 --GGSFTLTSGILSD--------------------EPIPGGASAATVNGALEGFVKAAALEL----PRGIRINVVSPTVL  157 (199)
T ss_pred             --CCeEEEEcccccC--------------------CCCCCchHHHHHHHHHHHHHHHHHHHc----cCCeEEEEEcCCcc
Confidence              5799999998762                    355677889999999999999999998    47899999999999


Q ss_pred             cCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceee
Q 024553          173 KTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFF  224 (266)
Q Consensus       173 ~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~  224 (266)
                      +|++.....    .      .+.....+|+++|+.++.++.  ...+|..+.
T Consensus       158 ~t~~~~~~~----~------~~~~~~~~~~~~a~~~~~~~~--~~~~g~~~~  197 (199)
T PRK07578        158 TESLEKYGP----F------FPGFEPVPAARVALAYVRSVE--GAQTGEVYK  197 (199)
T ss_pred             cCchhhhhh----c------CCCCCCCCHHHHHHHHHHHhc--cceeeEEec
Confidence            998642110    0      011134599999999885442  345555543

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.3e-20  Score=154.81  Aligned_cols=174  Identities=17%  Similarity=0.099  Sum_probs=137.3

Q ss_pred             ccEEEEEecCCC--HHHHHHHHHHHHHhhccCCCC-CCcceeeEcCCCC---CCCCcCCCcccchhhhhhhhhHHHHHHh
Q 024553           11 ARLEAFQVDLSS--FQSVLKFKDSLQQWLLDSDMH-SSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKL   84 (266)
Q Consensus        11 ~~~~~i~~Dls~--~~~v~~~~~~i~~~~~~~~~~-~~ld~lv~nAG~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~   84 (266)
                      ..+.++.+|+++  .+++.++++++.+      .. +.+|++|||||..   .+..+.+.++|++++++|+.|++.+++.
T Consensus        56 ~~~~~~~~D~~~~~~~~~~~~~~~i~~------~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~  129 (239)
T PRK08703         56 PEPFAIRFDLMSAEEKEFEQFAATIAE------ATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRA  129 (239)
T ss_pred             CCcceEEeeecccchHHHHHHHHHHHH------HhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHH
Confidence            357789999986  5788999999987      45 6899999999975   3456677889999999999999999999


Q ss_pred             hHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCC-CeE
Q 024553           85 LLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSR-HVS  163 (266)
Q Consensus        85 ~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~-~i~  163 (266)
                      +++.|.+.+ .+++|+++|..+.                    .+.+....|+++|++++.++++++.++.   .. +|+
T Consensus       130 ~~~~~~~~~-~~~iv~~ss~~~~--------------------~~~~~~~~Y~~sKaa~~~~~~~la~e~~---~~~~i~  185 (239)
T PRK08703        130 LFPLLKQSP-DASVIFVGESHGE--------------------TPKAYWGGFGASKAALNYLCKVAADEWE---RFGNLR  185 (239)
T ss_pred             HHHHHHhCC-CCEEEEEeccccc--------------------cCCCCccchHHhHHHHHHHHHHHHHHhc---cCCCeE
Confidence            999998766 7899999997752                    3455667899999999999999999996   44 799


Q ss_pred             EEEecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCccccee
Q 024553          164 VIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYF  223 (266)
Q Consensus       164 v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~  223 (266)
                      |+.|.||+|+|++.....+.....         ...+|++++..+++++.. ++..+|..+
T Consensus       186 v~~v~pG~v~t~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~g~~~  237 (239)
T PRK08703        186 ANVLVPGPINSPQRIKSHPGEAKS---------ERKSYGDVLPAFVWWASAESKGRSGEIV  237 (239)
T ss_pred             EEEEecCcccCccccccCCCCCcc---------ccCCHHHHHHHHHHHhCccccCcCCeEe
Confidence            999999999999865432211100         124899999999965542 345566543

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.85  E-value=3.7e-20  Score=152.59  Aligned_cols=189  Identities=28%  Similarity=0.350  Sum_probs=148.8

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.+|+++.+++.++++++.+      .++++|++|||||...  +..+.+.+++++++++|+.+.+.+++.+++
T Consensus        54 ~~~~~~~~~Dl~~~~~~~~~~~~~~~------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  127 (248)
T PRK05557         54 GGKALAVQGDVSDAESVERAVDEAKA------EFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVAR  127 (248)
T ss_pred             CCceEEEEcCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            45789999999999999999999988      5688999999999863  345667888999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .+.+.+ .+++|++||..+.                    .+.+....|+.+|.+++.+++++++++.   ..+++++.+
T Consensus       128 ~~~~~~-~~~~v~iss~~~~--------------------~~~~~~~~y~~sk~a~~~~~~~~a~~~~---~~~i~~~~v  183 (248)
T PRK05557        128 PMMKQR-SGRIINISSVVGL--------------------MGNPGQANYAASKAGVIGFTKSLARELA---SRGITVNAV  183 (248)
T ss_pred             HHHhcC-CeEEEEEcccccC--------------------cCCCCCchhHHHHHHHHHHHHHHHHHhh---hhCeEEEEE
Confidence            998765 6799999998652                    2345567899999999999999999987   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  229 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~  229 (266)
                      +||+++|++.....+... .......+.+.+.+|+++++.+.+++.. +...+|..+..++|-
T Consensus       184 ~pg~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~i~~~~  245 (248)
T PRK05557        184 APGFIETDMTDALPEDVK-EAILAQIPLGRLGQPEEIASAVAFLASDEAAYITGQTLHVNGGM  245 (248)
T ss_pred             ecCccCCccccccChHHH-HHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCccccEEEecCCc
Confidence            999999988765432221 1111122334567999999999854433 235578888776653

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.85  E-value=2.9e-20  Score=151.49  Aligned_cols=175  Identities=21%  Similarity=0.249  Sum_probs=135.1

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC----CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA----TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      ++.++.||+++.++++++++++..        +++|++|||||+..    +..+.+.++++..+++|+.+++.+++.+++
T Consensus        46 ~~~~~~~D~~d~~~~~~~~~~~~~--------~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  117 (225)
T PRK08177         46 GVHIEKLDMNDPASLDQLLQRLQG--------QRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLG  117 (225)
T ss_pred             ccceEEcCCCCHHHHHHHHHHhhc--------CCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHH
Confidence            467889999999999999988854        57999999999863    234667788999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .+++.  .+++++++|..+...                 ..+......|+++|++++.++++++.++.   +++|++++|
T Consensus       118 ~~~~~--~~~iv~~ss~~g~~~-----------------~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~---~~~i~v~~i  175 (225)
T PRK08177        118 QVRPG--QGVLAFMSSQLGSVE-----------------LPDGGEMPLYKASKAALNSMTRSFVAELG---EPTLTVLSM  175 (225)
T ss_pred             hhhhc--CCEEEEEccCccccc-----------------cCCCCCccchHHHHHHHHHHHHHHHHHhh---cCCeEEEEE
Confidence            98753  478999998765321                 11223456799999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      +||+++|++.....+                .++++.+..++..+..-....|..+....|+++.
T Consensus       176 ~PG~i~t~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (225)
T PRK08177        176 HPGWVKTDMGGDNAP----------------LDVETSVKGLVEQIEAASGKGGHRFIDYQGETLP  224 (225)
T ss_pred             cCCceecCCCCCCCC----------------CCHHHHHHHHHHHHHhCCccCCCceeCcCCcCCC
Confidence            999999999754321                2677788887766654443344443324555553

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.85  E-value=3.5e-20  Score=153.12  Aligned_cols=191  Identities=26%  Similarity=0.297  Sum_probs=149.7

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.+|+++.+++.++++++..      +++++|++|||+|...  +....+.+++++.+++|+.+++.+++.+++.
T Consensus        55 ~~~~~~~~Dl~~~~~~~~~~~~~~~------~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  128 (251)
T PRK12826         55 GKARARQVDVRDRAALKAAVAAGVE------DFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPA  128 (251)
T ss_pred             CeEEEEECCCCCHHHHHHHHHHHHH------HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            3588999999999999999999988      6689999999999864  3446678889999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |.+++ .+++|++||..+.                   ..+.+....|+.+|++++.+++.++.++.   ..+++++.+.
T Consensus       129 ~~~~~-~~~ii~~ss~~~~-------------------~~~~~~~~~y~~sK~a~~~~~~~~~~~~~---~~~i~~~~i~  185 (251)
T PRK12826        129 LIRAG-GGRIVLTSSVAGP-------------------RVGYPGLAHYAASKAGLVGFTRALALELA---ARNITVNSVH  185 (251)
T ss_pred             HHHcC-CcEEEEEechHhh-------------------ccCCCCccHHHHHHHHHHHHHHHHHHHHH---HcCeEEEEEe
Confidence            98776 7899999998763                   02445567899999999999999999986   6899999999


Q ss_pred             CCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC-CcccceeecCCCcc
Q 024553          169 PGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRT  230 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~-~~~G~~~~~~~g~~  230 (266)
                      ||.+.|+..................+++.+.+++++|+.++.++.... ..+|..+..++|..
T Consensus       186 pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~  248 (251)
T PRK12826        186 PGGVDTPMAGNLGDAQWAEAIAAAIPLGRLGEPEDIAAAVLFLASDEARYITGQTLPVDGGAT  248 (251)
T ss_pred             eCCCCcchhhhcCchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCcEEEECCCcc
Confidence            999999976554322111111112244466799999999986543322 34788887666553

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.85  E-value=7.2e-20  Score=150.14  Aligned_cols=187  Identities=25%  Similarity=0.337  Sum_probs=145.8

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .+++++.||+++.++++++++++.+      ..+++|++|||||...  +..+.+.+.+++++++|+.+++.+++.+.+.
T Consensus        48 ~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  121 (239)
T TIGR01830        48 VKALGVVCDVSDREDVKAVVEEIEE------ELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRI  121 (239)
T ss_pred             CceEEEEecCCCHHHHHHHHHHHHH------HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            4688999999999999999999988      5689999999999863  3345677889999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      +.+.+ .+++|++||..+.                    .+.+....|+.+|.++..+++.++.++.   ..+++++.++
T Consensus       122 ~~~~~-~~~~v~~sS~~~~--------------------~g~~~~~~y~~~k~a~~~~~~~l~~~~~---~~g~~~~~i~  177 (239)
T TIGR01830       122 MIKQR-SGRIINISSVVGL--------------------MGNAGQANYAASKAGVIGFTKSLAKELA---SRNITVNAVA  177 (239)
T ss_pred             HHhcC-CeEEEEECCcccc--------------------CCCCCCchhHHHHHHHHHHHHHHHHHHh---hcCeEEEEEE
Confidence            87655 6799999998753                    2345567899999999999999999987   7899999999


Q ss_pred             CCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCC
Q 024553          169 PGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKG  228 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g  228 (266)
                      ||++.|++........... .....+.+++.+++++++.+++++... ...+|.++..+.|
T Consensus       178 pg~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~g  237 (239)
T TIGR01830       178 PGFIDTDMTDKLSEKVKKK-ILSQIPLGRFGTPEEVANAVAFLASDEASYITGQVIHVDGG  237 (239)
T ss_pred             ECCCCChhhhhcChHHHHH-HHhcCCcCCCcCHHHHHHHHHHHhCcccCCcCCCEEEeCCC
Confidence            9999998765433221111 111123445679999999998655322 2446887775544

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.85  E-value=3.4e-21  Score=148.62  Aligned_cols=138  Identities=26%  Similarity=0.327  Sum_probs=124.3

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      .+.....|++++++|..+..+++..     ..|++|+|+||||...  |..+.+.+..++.|++|+.|++++++++...+
T Consensus        53 gl~~~kLDV~~~~~V~~v~~evr~~-----~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~l  127 (289)
T KOG1209|consen   53 GLKPYKLDVSKPEEVVTVSGEVRAN-----PDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFL  127 (289)
T ss_pred             CCeeEEeccCChHHHHHHHHHHhhC-----CCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHH
Confidence            4889999999999999999999872     5699999999999974  66678889999999999999999999999666


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      .+.  .|.||+++|..+..                    +++....|.+||+|++++++.|..|++   +.||+|..+.|
T Consensus       128 ika--KGtIVnvgSl~~~v--------------------pfpf~~iYsAsKAAihay~~tLrlEl~---PFgv~Vin~it  182 (289)
T KOG1209|consen  128 IKA--KGTIVNVGSLAGVV--------------------PFPFGSIYSASKAAIHAYARTLRLELK---PFGVRVINAIT  182 (289)
T ss_pred             HHc--cceEEEecceeEEe--------------------ccchhhhhhHHHHHHHHhhhhcEEeee---ccccEEEEecc
Confidence            654  69999999998743                    677788999999999999999999998   99999999999


Q ss_pred             CcccCCccCc
Q 024553          170 GVVKTNIMRE  179 (266)
Q Consensus       170 G~v~T~~~~~  179 (266)
                      |.|.|++...
T Consensus       183 GGv~T~Ia~k  192 (289)
T KOG1209|consen  183 GGVATDIADK  192 (289)
T ss_pred             cceecccccC
Confidence            9999999865

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.84  E-value=4.6e-20  Score=151.97  Aligned_cols=184  Identities=22%  Similarity=0.204  Sum_probs=140.4

Q ss_pred             EEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           13 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        13 ~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      +.++.+|+++.+++.++++.          .+++|++|||||...  +..+.+.+++++++++|+.+++.+++.+++.++
T Consensus        55 ~~~~~~D~~~~~~v~~~~~~----------~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  124 (245)
T PRK07060         55 CEPLRLDVGDDAAIRAALAA----------AGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMI  124 (245)
T ss_pred             CeEEEecCCCHHHHHHHHHH----------hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence            56789999999988887754          257999999999863  334567788999999999999999999999987


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                      +.+..++||++||..+.                    .+.+....|+.+|++++.++++++.++.   +.+|++++++||
T Consensus       125 ~~~~~~~iv~~sS~~~~--------------------~~~~~~~~y~~sK~a~~~~~~~~a~~~~---~~~i~v~~v~pg  181 (245)
T PRK07060        125 AAGRGGSIVNVSSQAAL--------------------VGLPDHLAYCASKAALDAITRVLCVELG---PHGIRVNSVNPT  181 (245)
T ss_pred             HcCCCcEEEEEccHHHc--------------------CCCCCCcHhHHHHHHHHHHHHHHHHHHh---hhCeEEEEEeeC
Confidence            65434899999998763                    2345567899999999999999999987   679999999999


Q ss_pred             cccCCccCcchhH-HHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          171 VVKTNIMREVPSF-LSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       171 ~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      +++|++....... ..........+.+++.+|+++|+.+++++..+ ...+|.++..++|.
T Consensus       182 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~G~~~~~~~g~  242 (245)
T PRK07060        182 VTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDAASMVSGVSLPVDGGY  242 (245)
T ss_pred             CCCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCccCcEEeECCCc
Confidence            9999986432111 11111111223456789999999999655433 24578888876664

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.84  E-value=8.9e-20  Score=150.64  Aligned_cols=188  Identities=20%  Similarity=0.117  Sum_probs=140.6

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .++.++.+|+++.+++.++++++.+      .++.+|++|||||....    ....++..+++|+.+++.+++.+.++|.
T Consensus        56 ~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~~d~vi~~ag~~~~----~~~~~~~~~~vn~~~~~~l~~~~~~~~~  125 (248)
T PRK07806         56 GRASAVGADLTDEESVAALMDTARE------EFGGLDALVLNASGGME----SGMDEDYAMRLNRDAQRNLARAALPLMP  125 (248)
T ss_pred             CceEEEEcCCCCHHHHHHHHHHHHH------hCCCCcEEEECCCCCCC----CCCCcceeeEeeeHHHHHHHHHHHhhcc
Confidence            4688999999999999999999987      66789999999987421    1224678899999999999999999986


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                      +   .+++|++||..+....               .....+....|+.+|++++.++++++.++.   ..+|+++.+.||
T Consensus       126 ~---~~~iv~isS~~~~~~~---------------~~~~~~~~~~Y~~sK~a~e~~~~~l~~~~~---~~~i~v~~v~pg  184 (248)
T PRK07806        126 A---GSRVVFVTSHQAHFIP---------------TVKTMPEYEPVARSKRAGEDALRALRPELA---EKGIGFVVVSGD  184 (248)
T ss_pred             C---CceEEEEeCchhhcCc---------------cccCCccccHHHHHHHHHHHHHHHHHHHhh---ccCeEEEEeCCc
Confidence            4   4799999996542100               011233456899999999999999999997   789999999999


Q ss_pred             cccCCccCcchhH-HHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcc
Q 024553          171 VVKTNIMREVPSF-LSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRT  230 (266)
Q Consensus       171 ~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~  230 (266)
                      ++.|++....... ..........+.+++.+|+|+|+.+++++. ++..+|..+..++++.
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~g~~~~i~~~~~  244 (248)
T PRK07806        185 MIEGTVTATLLNRLNPGAIEARREAAGKLYTVSEFAAEVARAVT-APVPSGHIEYVGGADY  244 (248)
T ss_pred             cccCchhhhhhccCCHHHHHHHHhhhcccCCHHHHHHHHHHHhh-ccccCccEEEecCccc
Confidence            9998865432110 000111122355678899999999997655 4456788777666653

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.84  E-value=6.4e-20  Score=151.50  Aligned_cols=175  Identities=22%  Similarity=0.261  Sum_probs=139.8

Q ss_pred             ccEEEEEecCC--CHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC---CCCcCCCcccchhhhhhhhhHHHHHHhh
Q 024553           11 ARLEAFQVDLS--SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLL   85 (266)
Q Consensus        11 ~~~~~i~~Dls--~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~   85 (266)
                      .++.++.+|++  +.++++++++.+.+      .++++|+||||||...   +..+.+.++|++.+++|+.+++.+++.+
T Consensus        62 ~~~~~~~~d~~~~~~~~~~~~~~~~~~------~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~  135 (247)
T PRK08945         62 PQPAIIPLDLLTATPQNYQQLADTIEE------QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQAL  135 (247)
T ss_pred             CCceEEEecccCCCHHHHHHHHHHHHH------HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHH
Confidence            45777888886  78999999999988      6689999999999753   3456778899999999999999999999


Q ss_pred             HHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEE
Q 024553           86 LPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVI  165 (266)
Q Consensus        86 ~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~  165 (266)
                      ++.|++++ .++||++||..+.                    .+.+....|+++|++++.+++.++.++.   ..+|+++
T Consensus       136 ~~~l~~~~-~~~iv~~ss~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~~~~~~~---~~~i~~~  191 (247)
T PRK08945        136 LPLLLKSP-AASLVFTSSSVGR--------------------QGRANWGAYAVSKFATEGMMQVLADEYQ---GTNLRVN  191 (247)
T ss_pred             HHHHHhCC-CCEEEEEccHhhc--------------------CCCCCCcccHHHHHHHHHHHHHHHHHhc---ccCEEEE
Confidence            99998876 7899999998763                    2445567899999999999999999997   7899999


Q ss_pred             EecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceee
Q 024553          166 AADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFF  224 (266)
Q Consensus       166 ~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~  224 (266)
                      +++||++.|++.....+...         ...+.+|+++++.+++++... ...+|+++.
T Consensus       192 ~v~pg~v~t~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  242 (247)
T PRK08945        192 CINPGGTRTAMRASAFPGED---------PQKLKTPEDIMPLYLYLMGDDSRRKNGQSFD  242 (247)
T ss_pred             EEecCCccCcchhhhcCccc---------ccCCCCHHHHHHHHHHHhCccccccCCeEEe
Confidence            99999999986533211110         123569999999999754321 245677765

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.84  E-value=8.6e-20  Score=152.03  Aligned_cols=189  Identities=25%  Similarity=0.319  Sum_probs=145.3

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC---CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      ++.++.+|+++++++..+++++.+      ..+++|+||||||...   +....+.+++++++++|+.+++.+++.+++.
T Consensus        59 ~~~~~~~D~~~~~~~~~~~~~~~~------~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  132 (264)
T PRK12829         59 KVTATVADVADPAQVERVFDTAVE------RFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPL  132 (264)
T ss_pred             ceEEEEccCCCHHHHHHHHHHHHH------HhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            678999999999999999999988      5688999999999863   2446677889999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      ++..+.+++|+++||..+.                    .+.+....|+.+|++++.+++.++.++.   ..+++++.+.
T Consensus       133 ~~~~~~~~~vv~~ss~~~~--------------------~~~~~~~~y~~~K~a~~~~~~~l~~~~~---~~~i~~~~l~  189 (264)
T PRK12829        133 LKASGHGGVIIALSSVAGR--------------------LGYPGRTPYAASKWAVVGLVKSLAIELG---PLGIRVNAIL  189 (264)
T ss_pred             HHhCCCCeEEEEecccccc--------------------cCCCCCchhHHHHHHHHHHHHHHHHHHh---hcCeEEEEEe
Confidence            8876523678888887652                    2455567899999999999999999986   6899999999


Q ss_pred             CCcccCCccCcchhH---------HHH-HHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          169 PGVVKTNIMREVPSF---------LSL-MAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       169 PG~v~T~~~~~~~~~---------~~~-~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      ||++.|++.......         ... .......+.+++.+++++|+.+++++... +..+|..+..++|.
T Consensus       190 pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~g~  261 (264)
T PRK12829        190 PGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATALFLASPAARYITGQAISVDGNV  261 (264)
T ss_pred             cCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEEEeCCCc
Confidence            999999876443211         000 00111112335779999999998654322 34578888777665

>PRK08324 short chain dehydrogenase; Validated

Probab=99.84  E-value=1.5e-19  Score=169.14  Aligned_cols=192  Identities=19%  Similarity=0.199  Sum_probs=151.9

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      ..+.++.||+++.+++.++++++.+      .++++|++|||||...  +..+.+.+.|+.++++|+.|++.+++.+.+.
T Consensus       470 ~~v~~v~~Dvtd~~~v~~~~~~~~~------~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  543 (681)
T PRK08324        470 DRALGVACDVTDEAAVQAAFEEAAL------AFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRI  543 (681)
T ss_pred             CcEEEEEecCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            3688999999999999999999988      6689999999999863  4556788999999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |++++.+++||++||..+.                    .+.++...|+.+|++++.++++++.++.   ..+|+++.|+
T Consensus       544 l~~~~~~g~iV~vsS~~~~--------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gIrvn~v~  600 (681)
T PRK08324        544 MKAQGLGGSIVFIASKNAV--------------------NPGPNFGAYGAAKAAELHLVRQLALELG---PDGIRVNGVN  600 (681)
T ss_pred             HHhcCCCcEEEEECCcccc--------------------CCCCCcHHHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEe
Confidence            9886634899999998763                    2445667899999999999999999997   7899999999


Q ss_pred             CCcc--cCCccCcchhHHH----------H-HHHHHHHHhhcCCCHHHHHHHHHHHhc-CCCCcccceeecCCCccc
Q 024553          169 PGVV--KTNIMREVPSFLS----------L-MAFTVLKLLGLLQSPEKGINSVLDAAL-APPETSGVYFFGGKGRTV  231 (266)
Q Consensus       169 PG~v--~T~~~~~~~~~~~----------~-~~~~~~~~~~~~~~p~~~a~~~~~~~~-~~~~~~G~~~~~~~g~~~  231 (266)
                      ||.+  .|++.........          . ..+....+++.+.+|+++|+++++++. .....+|..+..++|...
T Consensus       601 Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdgG~~~  677 (681)
T PRK08324        601 PDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVVFLASGLLSKTTGAIITVDGGNAA  677 (681)
T ss_pred             CceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHHHHHhCccccCCcCCEEEECCCchh
Confidence            9999  7876543211100          0 111222234567899999999996543 234567888887777654

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.84  E-value=6.5e-20  Score=152.88  Aligned_cols=167  Identities=29%  Similarity=0.336  Sum_probs=135.9

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.+|+++.+++.++++.+.+       .+++|++|||||...  +..+.+.+++++++++|+.|++.+++.++++
T Consensus        53 ~~~~~~~~D~~d~~~~~~~~~~~~~-------~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~  125 (263)
T PRK09072         53 GRHRWVVADLTSEAGREAVLARARE-------MGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPL  125 (263)
T ss_pred             CceEEEEccCCCHHHHHHHHHHHHh-------cCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence            4788999999999999999998875       378999999999863  3456678889999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |.+++ .++||++||..+.                    .+.++...|+.+|+++..++++++.++.   +.+|+|+.++
T Consensus       126 ~~~~~-~~~iv~isS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~l~~~~~---~~~i~v~~v~  181 (263)
T PRK09072        126 LRAQP-SAMVVNVGSTFGS--------------------IGYPGYASYCASKFALRGFSEALRRELA---DTGVRVLYLA  181 (263)
T ss_pred             HHhcC-CCEEEEecChhhC--------------------cCCCCccHHHHHHHHHHHHHHHHHHHhc---ccCcEEEEEe
Confidence            98866 6899999998763                    2445567899999999999999999997   7899999999


Q ss_pred             CCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Q 024553          169 PGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA  214 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~  214 (266)
                      ||+++|++........      ......+..+|+++|+.+++++..
T Consensus       182 Pg~~~t~~~~~~~~~~------~~~~~~~~~~~~~va~~i~~~~~~  221 (263)
T PRK09072        182 PRATRTAMNSEAVQAL------NRALGNAMDDPEDVAAAVLQAIEK  221 (263)
T ss_pred             cCcccccchhhhcccc------cccccCCCCCHHHHHHHHHHHHhC
Confidence            9999998754321110      000111456999999999976654

>PRK06194 hypothetical protein; Provisional

Probab=99.84  E-value=2e-19  Score=151.82  Aligned_cols=176  Identities=22%  Similarity=0.227  Sum_probs=135.6

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCC--CCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.+|+++.+++.++++++.+      .++++|+||||||....  ..+.+.++|++++++|+.|++.+++.++|
T Consensus        54 ~~~~~~~~~D~~d~~~~~~~~~~~~~------~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  127 (287)
T PRK06194         54 GAEVLGVRTDVSDAAQVEALADAALE------RFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTP  127 (287)
T ss_pred             CCeEEEEECCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHH
Confidence            34688999999999999999999988      67899999999998743  44667889999999999999999999999


Q ss_pred             HHhcCCCC-----CeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCe
Q 024553           88 LLKNSPVP-----SRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHV  162 (266)
Q Consensus        88 ~l~~~~~~-----~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i  162 (266)
                      .|+++...     ++||++||..+..                    +.+....|+.+|++++.++++++.++.. ...+|
T Consensus       128 ~~~~~~~~~~~~~g~iv~~sS~~~~~--------------------~~~~~~~Y~~sK~a~~~~~~~l~~e~~~-~~~~i  186 (287)
T PRK06194        128 LMLAAAEKDPAYEGHIVNTASMAGLL--------------------APPAMGIYNVSKHAVVSLTETLYQDLSL-VTDQV  186 (287)
T ss_pred             HHHhcCCCCCCCCeEEEEeCChhhcc--------------------CCCCCcchHHHHHHHHHHHHHHHHHHhh-cCCCe
Confidence            99876522     7999999988632                    3455678999999999999999998752 13579


Q ss_pred             EEEEecCCcccCCccCcchh--H--------HHHHHH---HHHH-HhhcCCCHHHHHHHHHHHh
Q 024553          163 SVIAADPGVVKTNIMREVPS--F--------LSLMAF---TVLK-LLGLLQSPEKGINSVLDAA  212 (266)
Q Consensus       163 ~v~~v~PG~v~T~~~~~~~~--~--------~~~~~~---~~~~-~~~~~~~p~~~a~~~~~~~  212 (266)
                      +++.++||++.|++......  .        .+....   .... ......+++++|+.++.++
T Consensus       187 rv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~dva~~i~~~~  250 (287)
T PRK06194        187 GASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQKAVGSGKVTAEEVAQLVFDAI  250 (287)
T ss_pred             EEEEEEeCcccCccccccccCchhcccCccccchhhHHHHHHHhhhhccCCCHHHHHHHHHHHH
Confidence            99999999999998654211  0        000000   0000 0112359999999999654

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.84  E-value=4.5e-20  Score=151.64  Aligned_cols=168  Identities=21%  Similarity=0.326  Sum_probs=138.3

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.+|+++.+++.++++++.+      .++++|++|||||...  +..+.+.+++++++++|+.+++.+++.+.+
T Consensus        55 ~~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  128 (239)
T PRK07666         55 GVKVVIATADVSDYEEVTAAIEQLKN------ELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLP  128 (239)
T ss_pred             CCeEEEEECCCCCHHHHHHHHHHHHH------HcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            34788999999999999999999988      6689999999999863  344667788999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .+.+++ .+++|++||..+.                    .+.++...|+.+|+++..++++++.++.   +.+|+++.|
T Consensus       129 ~~~~~~-~~~iv~~ss~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~~a~e~~---~~gi~v~~v  184 (239)
T PRK07666        129 SMIERQ-SGDIINISSTAGQ--------------------KGAAVTSAYSASKFGVLGLTESLMQEVR---KHNIRVTAL  184 (239)
T ss_pred             HHHhCC-CcEEEEEcchhhc--------------------cCCCCCcchHHHHHHHHHHHHHHHHHhh---ccCcEEEEE
Confidence            998876 7899999998763                    3455567899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP  215 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~  215 (266)
                      .||++.|++........        .....+.+|+++|+.++.++..+
T Consensus       185 ~pg~v~t~~~~~~~~~~--------~~~~~~~~~~~~a~~~~~~l~~~  224 (239)
T PRK07666        185 TPSTVATDMAVDLGLTD--------GNPDKVMQPEDLAEFIVAQLKLN  224 (239)
T ss_pred             ecCcccCcchhhccccc--------cCCCCCCCHHHHHHHHHHHHhCC
Confidence            99999999765321110        00123468999999999776543

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.2e-19  Score=149.47  Aligned_cols=161  Identities=21%  Similarity=0.258  Sum_probs=132.4

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.+++||+++.++++++++++.+         .+|++|||||...  +..+.+.+++++++++|+.+++.+++.+.|
T Consensus        50 ~~~~~~~~~Dl~~~~~~~~~~~~~~~---------~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  120 (243)
T PRK07102         50 AVAVSTHELDILDTASHAAFLDSLPA---------LPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLAN  120 (243)
T ss_pred             CCeEEEEecCCCChHHHHHHHHHHhh---------cCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Confidence            45789999999999999999998865         4699999999763  334556777889999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|.+.+ .+++|++||..+.                    .+.+....|+.+|+++..++++++.++.   +.+|++++|
T Consensus       121 ~~~~~~-~~~iv~~sS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~l~~el~---~~gi~v~~v  176 (243)
T PRK07102        121 RFEARG-SGTIVGISSVAGD--------------------RGRASNYVYGSAKAALTAFLSGLRNRLF---KSGVHVLTV  176 (243)
T ss_pred             HHHhCC-CCEEEEEeccccc--------------------CCCCCCcccHHHHHHHHHHHHHHHHHhh---ccCcEEEEE
Confidence            998776 7899999998752                    2345566799999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA  214 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~  214 (266)
                      +||+++|++......           +.....+|+++++.++.++..
T Consensus       177 ~pg~v~t~~~~~~~~-----------~~~~~~~~~~~a~~i~~~~~~  212 (243)
T PRK07102        177 KPGFVRTPMTAGLKL-----------PGPLTAQPEEVAKDIFRAIEK  212 (243)
T ss_pred             ecCcccChhhhccCC-----------CccccCCHHHHHHHHHHHHhC
Confidence            999999987654320           011245899999999976553

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.83  E-value=1.4e-19  Score=149.85  Aligned_cols=190  Identities=18%  Similarity=0.222  Sum_probs=146.1

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.+|+++.+++..+++++.+      ..+++|++|||||...  +..+.+.+++++++++|+.+++.+++.+++
T Consensus        49 ~~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~  122 (255)
T TIGR01963        49 GGSVIYLVADVTKEDEIADMIAAAAA------EFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALP  122 (255)
T ss_pred             CCceEEEECCCCCHHHHHHHHHHHHH------hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            34689999999999999999999988      5678999999999863  334556788999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++.+ .+++|++||..+.                    .+.+....|+.+|.+++.+++.++.++.   ..+++++.+
T Consensus       123 ~~~~~~-~~~~v~~ss~~~~--------------------~~~~~~~~y~~sk~a~~~~~~~~~~~~~---~~~i~v~~i  178 (255)
T TIGR01963       123 HMKKQG-WGRIINIASAHGL--------------------VASPFKSAYVAAKHGLIGLTKVLALEVA---AHGITVNAI  178 (255)
T ss_pred             HHHhcC-CeEEEEEcchhhc--------------------CCCCCCchhHHHHHHHHHHHHHHHHHhh---hcCeEEEEE
Confidence            998766 6799999997652                    2445567899999999999999999986   679999999


Q ss_pred             cCCcccCCccCcchhHH---------HHHH--HHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          168 DPGVVKTNIMREVPSFL---------SLMA--FTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~---------~~~~--~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      +||++.|++........         ....  .....+.+.+.+++|+|+++++++..+ ...+|++|..++|.
T Consensus       179 ~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~g~  252 (255)
T TIGR01963       179 CPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFLASDAAAGITGQAIVLDGGW  252 (255)
T ss_pred             ecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHHcCccccCccceEEEEcCcc
Confidence            99999998753321110         0000  001112234679999999999766543 34578887766553

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.83  E-value=8.6e-20  Score=152.08  Aligned_cols=172  Identities=26%  Similarity=0.271  Sum_probs=135.3

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcC-CCcccchhhhhhhhhHHHHHHhhHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRL-TPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      .++.++.+|+++.+++..+++++.+      ..+++|++|||||...  +..+. +.+.+++.+++|+.+++.+++.+.+
T Consensus        50 ~~~~~~~~Dl~~~~~~~~~~~~~~~------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  123 (263)
T PRK06181         50 GEALVVPTDVSDAEACERLIEAAVA------RFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALP  123 (263)
T ss_pred             CcEEEEEccCCCHHHHHHHHHHHHH------HcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            4688999999999999999999988      6688999999999763  23444 6778899999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|.+.  .+++|++||..+..                    +.++...|+.+|.+++.++++++.++.   ..+++++++
T Consensus       124 ~~~~~--~~~iv~~sS~~~~~--------------------~~~~~~~Y~~sK~~~~~~~~~l~~~~~---~~~i~~~~i  178 (263)
T PRK06181        124 HLKAS--RGQIVVVSSLAGLT--------------------GVPTRSGYAASKHALHGFFDSLRIELA---DDGVAVTVV  178 (263)
T ss_pred             HHHhc--CCEEEEEecccccC--------------------CCCCccHHHHHHHHHHHHHHHHHHHhh---hcCceEEEE
Confidence            98764  47999999987632                    445567899999999999999999987   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAAL  213 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~  213 (266)
                      .||++.|++....................++.+|+++|+.+++++.
T Consensus       179 ~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~  224 (263)
T PRK06181        179 CPGFVATDIRKRALDGDGKPLGKSPMQESKIMSAEECAEAILPAIA  224 (263)
T ss_pred             ecCccccCcchhhccccccccccccccccCCCCHHHHHHHHHHHhh
Confidence            9999999986543211100000000011256799999999996654

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.83  E-value=2.5e-19  Score=147.45  Aligned_cols=190  Identities=24%  Similarity=0.330  Sum_probs=148.8

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.+++.++++++..      .++++|++||+||...  +..+.+.+++++.+++|+.+.+.+++.+.+
T Consensus        53 ~~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  126 (246)
T PRK05653         53 GGEARVLVFDVSDEAAVRALIEAAVE------AFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALP  126 (246)
T ss_pred             CCceEEEEccCCCHHHHHHHHHHHHH------HhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            34688999999999999999999987      5688999999999863  345667888999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      ++.+.+ .++||++||..+.                    .+......|+.+|.+++.+++++++++.   ..+++++++
T Consensus       127 ~l~~~~-~~~ii~~ss~~~~--------------------~~~~~~~~y~~sk~~~~~~~~~l~~~~~---~~~i~~~~i  182 (246)
T PRK05653        127 PMIKAR-YGRIVNISSVSGV--------------------TGNPGQTNYSAAKAGVIGFTKALALELA---SRGITVNAV  182 (246)
T ss_pred             HHHhcC-CcEEEEECcHHhc--------------------cCCCCCcHhHhHHHHHHHHHHHHHHHHh---hcCeEEEEE
Confidence            998766 6899999997652                    2344557799999999999999999986   689999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCcc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  230 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~  230 (266)
                      +||.+.++.......... .......+.+.+.+|+++++.+++++... ...+|.++..++|..
T Consensus       183 ~pg~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~~  245 (246)
T PRK05653        183 APGFIDTDMTEGLPEEVK-AEILKEIPLGRLGQPEEVANAVAFLASDAASYITGQVIPVNGGMY  245 (246)
T ss_pred             EeCCcCCcchhhhhHHHH-HHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEeCCCee
Confidence            999999988654222111 11111223345678999999999765432 345788888777753

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.83  E-value=1.4e-19  Score=149.79  Aligned_cols=165  Identities=32%  Similarity=0.420  Sum_probs=133.4

Q ss_pred             ccEEEEEecCCC-HHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC---CCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           11 ARLEAFQVDLSS-FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        11 ~~~~~i~~Dls~-~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      ..+.++.+|+++ .++++.+++.+.+      ..+++|++|||||+..   +..+.+.++|++++++|+.+++.+++.+.
T Consensus        57 ~~~~~~~~Dvs~~~~~v~~~~~~~~~------~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~  130 (251)
T COG1028          57 GRAAAVAADVSDDEESVEALVAAAEE------EFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAAL  130 (251)
T ss_pred             CcEEEEEecCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHH
Confidence            368889999998 9999999999998      6789999999999973   56778889999999999999999999888


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCCh-hhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPC-ARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVI  165 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~  165 (266)
                      |.+++   . +||++||..+                    . ..+. ..+|+.||+++..++++++.++.   +.||+++
T Consensus       131 ~~~~~---~-~Iv~isS~~~--------------------~-~~~~~~~~Y~~sK~al~~~~~~l~~e~~---~~gi~v~  182 (251)
T COG1028         131 PLMKK---Q-RIVNISSVAG--------------------L-GGPPGQAAYAASKAALIGLTKALALELA---PRGIRVN  182 (251)
T ss_pred             Hhhhh---C-eEEEECCchh--------------------c-CCCCCcchHHHHHHHHHHHHHHHHHHHh---hhCcEEE
Confidence            88883   4 9999999986                    2 3333 47899999999999999999987   7899999


Q ss_pred             EecCCcccCCccCcchhHHHHH--HHHHHHHhhcCCCHHHHHHHHH
Q 024553          166 AADPGVVKTNIMREVPSFLSLM--AFTVLKLLGLLQSPEKGINSVL  209 (266)
Q Consensus       166 ~v~PG~v~T~~~~~~~~~~~~~--~~~~~~~~~~~~~p~~~a~~~~  209 (266)
                      .|+||++.|++...........  ......+..++..|.+++..+.
T Consensus       183 ~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (251)
T COG1028         183 AVAPGYIDTPMTAALESAELEALKRLAARIPLGRLGTPEEVAAAVA  228 (251)
T ss_pred             EEEeccCCCcchhhhhhhhhhHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            9999999999987643322000  0000002235668889998887

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1.7e-19  Score=148.41  Aligned_cols=158  Identities=19%  Similarity=0.224  Sum_probs=128.4

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.||+++.++++++++++..         .+|.+|+|||...  +....+.++|++++++|+.|++.+++.++|+
T Consensus        46 ~~~~~~~~D~~~~~~~~~~~~~~~~---------~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  116 (240)
T PRK06101         46 ANIFTLAFDVTDHPGTKAALSQLPF---------IPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPH  116 (240)
T ss_pred             CCCeEEEeeCCCHHHHHHHHHhccc---------CCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            3578999999999999999887643         4799999999753  2334677889999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |.+   +++||++||..+.                    .+.+....|+++|++++.++++++.++.   ..+|+++.+.
T Consensus       117 ~~~---~~~iv~isS~~~~--------------------~~~~~~~~Y~asK~a~~~~~~~l~~e~~---~~gi~v~~v~  170 (240)
T PRK06101        117 LSC---GHRVVIVGSIASE--------------------LALPRAEAYGASKAAVAYFARTLQLDLR---PKGIEVVTVF  170 (240)
T ss_pred             hhc---CCeEEEEechhhc--------------------cCCCCCchhhHHHHHHHHHHHHHHHHHH---hcCceEEEEe
Confidence            965   4689999998762                    3456677899999999999999999997   7899999999


Q ss_pred             CCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Q 024553          169 PGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA  214 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~  214 (266)
                      ||+++|++........           ....+|+++|+.++..+..
T Consensus       171 pg~i~t~~~~~~~~~~-----------~~~~~~~~~a~~i~~~i~~  205 (240)
T PRK06101        171 PGFVATPLTDKNTFAM-----------PMIITVEQASQEIRAQLAR  205 (240)
T ss_pred             CCcCCCCCcCCCCCCC-----------CcccCHHHHHHHHHHHHhc
Confidence            9999999865432100           0124899999999976654

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.81  E-value=2.9e-19  Score=167.21  Aligned_cols=165  Identities=24%  Similarity=0.265  Sum_probs=135.5

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCC--CCcC--CCcccchhhhhhhhhHHHHHHhh
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT--SSRL--TPEGYDQMMSTNYIGAFFLTKLL   85 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~--~~~~--~~~~~~~~~~~n~~~~~~l~~~~   85 (266)
                      +.++.++.||+++.+++.++++++.+      .++++|++|||||....  ....  ..+++++++++|+.|++.+++.+
T Consensus       419 ~~~~~~~~~Dv~~~~~~~~~~~~~~~------~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~  492 (657)
T PRK07201        419 GGTAHAYTCDLTDSAAVDHTVKDILA------EHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGL  492 (657)
T ss_pred             CCcEEEEEecCCCHHHHHHHHHHHHH------hcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            34789999999999999999999988      67899999999997532  1111  24678999999999999999999


Q ss_pred             HHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEE
Q 024553           86 LPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVI  165 (266)
Q Consensus        86 ~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~  165 (266)
                      +|.|++++ .++||++||.++..                    +.+....|+++|++++.++++++.++.   +.+|+|+
T Consensus       493 ~~~~~~~~-~g~iv~isS~~~~~--------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~~i~v~  548 (657)
T PRK07201        493 LPHMRERR-FGHVVNVSSIGVQT--------------------NAPRFSAYVASKAALDAFSDVAASETL---SDGITFT  548 (657)
T ss_pred             HHhhhhcC-CCEEEEECChhhcC--------------------CCCCcchHHHHHHHHHHHHHHHHHHHH---hhCCcEE
Confidence            99998876 78999999988632                    445567899999999999999999997   7899999


Q ss_pred             EecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Q 024553          166 AADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA  214 (266)
Q Consensus       166 ~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~  214 (266)
                      .|+||+|+|++.......          ......+|+++|+.++..+..
T Consensus       549 ~v~pg~v~T~~~~~~~~~----------~~~~~~~~~~~a~~i~~~~~~  587 (657)
T PRK07201        549 TIHMPLVRTPMIAPTKRY----------NNVPTISPEEAADMVVRAIVE  587 (657)
T ss_pred             EEECCcCcccccCccccc----------cCCCCCCHHHHHHHHHHHHHh
Confidence            999999999987542110          001235999999999976654

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.80  E-value=1.8e-18  Score=141.78  Aligned_cols=179  Identities=21%  Similarity=0.174  Sum_probs=143.2

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      .+.++.+|+++.+++.++++++.+      .++++|++||+||...  +....+.+.+++.+++|+.+++.+++.+++.+
T Consensus        55 ~~~~~~~D~~~~~~~~~~~~~~~~------~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~  128 (239)
T PRK12828         55 ALRIGGIDLVDPQAARRAVDEVNR------QFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPAL  128 (239)
T ss_pred             CceEEEeecCCHHHHHHHHHHHHH------HhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHH
Confidence            467788999999999999999988      6689999999999753  33455778899999999999999999999999


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      ++++ .++||++||..+..                    +.+....|+.+|.++..++++++.++.   ..+++++.+.|
T Consensus       129 ~~~~-~~~iv~~sS~~~~~--------------------~~~~~~~y~~sk~a~~~~~~~~a~~~~---~~~i~~~~i~p  184 (239)
T PRK12828        129 TASG-GGRIVNIGAGAALK--------------------AGPGMGAYAAAKAGVARLTEALAAELL---DRGITVNAVLP  184 (239)
T ss_pred             HhcC-CCEEEEECchHhcc--------------------CCCCcchhHHHHHHHHHHHHHHHHHhh---hcCeEEEEEec
Confidence            8766 78999999987632                    345567899999999999999999986   68999999999


Q ss_pred             CcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          170 GVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       170 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      |++.|+......+.         ..+..+.+++++|+.+++++... ...+|..+..++|.
T Consensus       185 g~v~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~~l~~~~~~~~g~~~~~~g~~  236 (239)
T PRK12828        185 SIIDTPPNRADMPD---------ADFSRWVTPEQIAAVIAFLLSDEAQAITGASIPVDGGV  236 (239)
T ss_pred             CcccCcchhhcCCc---------hhhhcCCCHHHHHHHHHHHhCcccccccceEEEecCCE
Confidence            99999864322111         11223568999999998665432 24468888777665

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.80  E-value=2.2e-18  Score=141.31  Aligned_cols=167  Identities=28%  Similarity=0.371  Sum_probs=136.5

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .+++++.+|+++.+++..+++++.+      .++++|++|||+|...  +..+.+.+++++++++|+.+++.+++.+++.
T Consensus        54 ~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  127 (237)
T PRK07326         54 GNVLGLAADVRDEADVQRAVDAIVA------AFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPA  127 (237)
T ss_pred             CcEEEEEccCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHH
Confidence            4688999999999999999999988      5688999999999763  3456778889999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      ++. + .++||++||..+.                    .+......|+.+|+++..+++.++.++.   ..+++++++.
T Consensus       128 ~~~-~-~~~iv~~ss~~~~--------------------~~~~~~~~y~~sk~a~~~~~~~~~~~~~---~~gi~v~~v~  182 (237)
T PRK07326        128 LKR-G-GGYIINISSLAGT--------------------NFFAGGAAYNASKFGLVGFSEAAMLDLR---QYGIKVSTIM  182 (237)
T ss_pred             HHH-C-CeEEEEECChhhc--------------------cCCCCCchHHHHHHHHHHHHHHHHHHhc---ccCcEEEEEe
Confidence            843 3 5799999998752                    2344567799999999999999999987   7899999999


Q ss_pred             CCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCc
Q 024553          169 PGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPET  218 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~  218 (266)
                      ||++.|++....+....          ....+++++++.+++++..++..
T Consensus       183 pg~~~t~~~~~~~~~~~----------~~~~~~~d~a~~~~~~l~~~~~~  222 (237)
T PRK07326        183 PGSVATHFNGHTPSEKD----------AWKIQPEDIAQLVLDLLKMPPRT  222 (237)
T ss_pred             eccccCcccccccchhh----------hccCCHHHHHHHHHHHHhCCccc
Confidence            99999988655432110          01248999999999877666543

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.77  E-value=2.8e-18  Score=140.38  Aligned_cols=173  Identities=20%  Similarity=0.146  Sum_probs=141.6

Q ss_pred             EEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           13 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        13 ~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      +.++.+|+++-+++...+++++.      ..+.+|.+|||||..  +-+.+.+.+.++.+|++|++|+++.+++.++.|+
T Consensus        86 v~~~S~d~~~Y~~v~~~~~~l~~------~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk  159 (331)
T KOG1210|consen   86 VSYKSVDVIDYDSVSKVIEELRD------LEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMK  159 (331)
T ss_pred             eeEeccccccHHHHHHHHhhhhh------ccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhh
Confidence            77999999999999999999987      679999999999987  4467889999999999999999999999999999


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                      +....|+|+.+||.++.                    -+..+..+|+.+|+|+.+++..+++|+.   +.+|.|..+.|+
T Consensus       160 ~~~~~g~I~~vsS~~a~--------------------~~i~GysaYs~sK~alrgLa~~l~qE~i---~~~v~Vt~~~P~  216 (331)
T KOG1210|consen  160 KREHLGRIILVSSQLAM--------------------LGIYGYSAYSPSKFALRGLAEALRQELI---KYGVHVTLYYPP  216 (331)
T ss_pred             ccccCcEEEEehhhhhh--------------------cCcccccccccHHHHHHHHHHHHHHHHh---hcceEEEEEcCC
Confidence            87656799999999873                    3778889999999999999999999997   789999999999


Q ss_pred             cccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC
Q 024553          171 VVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP  215 (266)
Q Consensus       171 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~  215 (266)
                      .+.||....-........... .......+++++|.+++.-+...
T Consensus       217 ~~~tpGfE~En~tkP~~t~ii-~g~ss~~~~e~~a~~~~~~~~rg  260 (331)
T KOG1210|consen  217 DTLTPGFERENKTKPEETKII-EGGSSVIKCEEMAKAIVKGMKRG  260 (331)
T ss_pred             CCCCCccccccccCchheeee-cCCCCCcCHHHHHHHHHhHHhhc
Confidence            999997654211111110000 01112358999999998655543

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.77  E-value=1.3e-17  Score=135.50  Aligned_cols=166  Identities=22%  Similarity=0.278  Sum_probs=128.3

Q ss_pred             EEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC----CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           13 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA----TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        13 ~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      +.++.+|+++.++++++++++..        +++|++|||+|...    +..+.+.+++++++++|+.+++.+++.++|+
T Consensus        46 ~~~~~~D~~~~~~v~~~~~~~~~--------~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  117 (222)
T PRK06953         46 AEALALDVADPASVAGLAWKLDG--------EALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPL  117 (222)
T ss_pred             ceEEEecCCCHHHHHHHHHHhcC--------CCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHh
Confidence            56899999999999998877643        57999999999862    2335578899999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |.+.  .+++++++|..+...                 ..+......|+.+|.+++.+++.++.++     .++++++|+
T Consensus       118 ~~~~--~g~iv~isS~~~~~~-----------------~~~~~~~~~Y~~sK~a~~~~~~~~~~~~-----~~i~v~~v~  173 (222)
T PRK06953        118 VEAA--GGVLAVLSSRMGSIG-----------------DATGTTGWLYRASKAALNDALRAASLQA-----RHATCIALH  173 (222)
T ss_pred             hhcc--CCeEEEEcCcccccc-----------------cccCCCccccHHhHHHHHHHHHHHhhhc-----cCcEEEEEC
Confidence            8663  578999999765321                 0111112369999999999999999885     479999999


Q ss_pred             CCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc-CCCCcccceeecC
Q 024553          169 PGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAAL-APPETSGVYFFGG  226 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~-~~~~~~G~~~~~~  226 (266)
                      ||+++|++....+                ..++++.+..++.++. ..+..+|.||..+
T Consensus       174 Pg~i~t~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (222)
T PRK06953        174 PGWVRTDMGGAQA----------------ALDPAQSVAGMRRVIAQATRRDNGRFFQYD  216 (222)
T ss_pred             CCeeecCCCCCCC----------------CCCHHHHHHHHHHHHHhcCcccCceEEeeC
Confidence            9999999865421                1378888888886544 2345678888643

>PRK08017 oxidoreductase; Provisional

Probab=99.77  E-value=1.7e-17  Score=137.55  Aligned_cols=173  Identities=25%  Similarity=0.253  Sum_probs=134.2

Q ss_pred             EEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           13 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        13 ~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      +.++.||+++.+++..+++.+...     ..+.+|.+|||||...  +..+.+.+.+++++++|+.|++.+++.+++.++
T Consensus        47 ~~~~~~D~~~~~~~~~~~~~i~~~-----~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~  121 (256)
T PRK08017         47 FTGILLDLDDPESVERAADEVIAL-----TDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAML  121 (256)
T ss_pred             CeEEEeecCCHHHHHHHHHHHHHh-----cCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHh
Confidence            678999999999999999988761     1267999999999763  445667888999999999999999999999998


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                      +.+ .++||++||..+.                    .+.+....|+.+|++++.++++++.++.   ..+++++.+.||
T Consensus       122 ~~~-~~~iv~~ss~~~~--------------------~~~~~~~~Y~~sK~~~~~~~~~l~~~~~---~~~i~v~~v~pg  177 (256)
T PRK08017        122 PHG-EGRIVMTSSVMGL--------------------ISTPGRGAYAASKYALEAWSDALRMELR---HSGIKVSLIEPG  177 (256)
T ss_pred             hcC-CCEEEEEcCcccc--------------------cCCCCccHHHHHHHHHHHHHHHHHHHHh---hcCCEEEEEeCC
Confidence            876 6899999998752                    2345567899999999999999999987   789999999999


Q ss_pred             cccCCccCcchhHHH-HHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Q 024553          171 VVKTNIMREVPSFLS-LMAFTVLKLLGLLQSPEKGINSVLDAALA  214 (266)
Q Consensus       171 ~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~a~~~~~~~~~  214 (266)
                      .+.|++......... ............+.+|+++++.+..++..
T Consensus       178 ~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~  222 (256)
T PRK08017        178 PIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHALES  222 (256)
T ss_pred             CcccchhhcccchhhccchhhhHHHhhcCCCHHHHHHHHHHHHhC
Confidence            999988765322110 00000100112346999999999966543

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.77  E-value=1.9e-17  Score=135.89  Aligned_cols=181  Identities=19%  Similarity=0.148  Sum_probs=137.2

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      +++++.||+++.+++.++++++..      .++++|.+|+|+|........+.+++++++++|+.+++.+++.++|.+++
T Consensus        54 ~~~~~~~Dl~~~~~~~~~~~~~~~------~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~  127 (238)
T PRK05786         54 NIHYVVGDVSSTESARNVIEKAAK------VLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKE  127 (238)
T ss_pred             CeEEEECCCCCHHHHHHHHHHHHH------HhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhc
Confidence            588999999999999999999887      55789999999997632222234788999999999999999999999865


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCc
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV  171 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~  171 (266)
                         .+++|++||..+..                   .+.+....|+.+|+++..++++++.++.   ..+|+++.+.||+
T Consensus       128 ---~~~iv~~ss~~~~~-------------------~~~~~~~~Y~~sK~~~~~~~~~~~~~~~---~~gi~v~~i~pg~  182 (238)
T PRK05786        128 ---GSSIVLVSSMSGIY-------------------KASPDQLSYAVAKAGLAKAVEILASELL---GRGIRVNGIAPTT  182 (238)
T ss_pred             ---CCEEEEEecchhcc-------------------cCCCCchHHHHHHHHHHHHHHHHHHHHh---hcCeEEEEEecCc
Confidence               57999999976421                   1334456799999999999999999997   7899999999999


Q ss_pred             ccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC-CcccceeecCCCc
Q 024553          172 VKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGR  229 (266)
Q Consensus       172 v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~-~~~G~~~~~~~g~  229 (266)
                      +.|++.....    +...  ........+|+++++.+++++..+. ..+|.++..++|.
T Consensus       183 v~~~~~~~~~----~~~~--~~~~~~~~~~~~va~~~~~~~~~~~~~~~g~~~~~~~~~  235 (238)
T PRK05786        183 ISGDFEPERN----WKKL--RKLGDDMAPPEDFAKVIIWLLTDEADWVDGVVIPVDGGA  235 (238)
T ss_pred             cCCCCCchhh----hhhh--ccccCCCCCHHHHHHHHHHHhcccccCccCCEEEECCcc
Confidence            9998743211    1000  0001134699999999997664332 3467776655443

>PRK08264 short chain dehydrogenase; Validated

Probab=99.76  E-value=2.4e-17  Score=135.32  Aligned_cols=156  Identities=26%  Similarity=0.371  Sum_probs=129.6

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC---CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      .++.++.+|+++.+++.++++.+          +++|++||+||..   .+..+.+.+++++++++|+.+++.+++.+++
T Consensus        49 ~~~~~~~~D~~~~~~~~~~~~~~----------~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  118 (238)
T PRK08264         49 PRVVPLQLDVTDPASVAAAAEAA----------SDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAP  118 (238)
T ss_pred             CceEEEEecCCCHHHHHHHHHhc----------CCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            46889999999999998877533          5799999999983   2445667889999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .++..+ .+++|++||..+.                    .+.++...|+.+|++++.+++.++.++.   +.+++++.+
T Consensus       119 ~~~~~~-~~~~v~~sS~~~~--------------------~~~~~~~~y~~sK~a~~~~~~~l~~~~~---~~~i~~~~v  174 (238)
T PRK08264        119 VLAANG-GGAIVNVLSVLSW--------------------VNFPNLGTYSASKAAAWSLTQALRAELA---PQGTRVLGV  174 (238)
T ss_pred             HHHhcC-CCEEEEEcChhhc--------------------cCCCCchHhHHHHHHHHHHHHHHHHHhh---hcCeEEEEE
Confidence            998766 7899999998752                    3455667899999999999999999987   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA  214 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~  214 (266)
                      .||.++|++......              ...+++++++.++..+..
T Consensus       175 ~pg~v~t~~~~~~~~--------------~~~~~~~~a~~~~~~~~~  207 (238)
T PRK08264        175 HPGPIDTDMAAGLDA--------------PKASPADVARQILDALEA  207 (238)
T ss_pred             eCCcccccccccCCc--------------CCCCHHHHHHHHHHHHhC
Confidence            999999998654321              134899999999876543

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.76  E-value=3.4e-17  Score=135.86  Aligned_cols=167  Identities=19%  Similarity=0.195  Sum_probs=127.4

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      ..+.++.+|+++.+++.++++            +++|+||||||...  +..+.+.++++..+++|+.+++.+++.+++.
T Consensus        51 ~~~~~~~~D~~~~~~~~~~~~------------~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  118 (257)
T PRK09291         51 LALRVEKLDLTDAIDRAQAAE------------WDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRK  118 (257)
T ss_pred             CcceEEEeeCCCHHHHHHHhc------------CCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            358899999999988876541            47999999999863  4556778889999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      +.+.+ .++||++||..+.                    ...++...|+.+|++++.+++.++.++.   ..+|+++.|+
T Consensus       119 ~~~~~-~~~iv~~SS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~l~~~~~---~~gi~~~~v~  174 (257)
T PRK09291        119 MVARG-KGKVVFTSSMAGL--------------------ITGPFTGAYCASKHALEAIAEAMHAELK---PFGIQVATVN  174 (257)
T ss_pred             HHhcC-CceEEEEcChhhc--------------------cCCCCcchhHHHHHHHHHHHHHHHHHHH---hcCcEEEEEe
Confidence            98876 5899999998763                    2345567899999999999999999986   7899999999


Q ss_pred             CCcccCCccCcchhHH-HH----HHHHHH---HHhhcCCCHHHHHHHHHHHhc
Q 024553          169 PGVVKTNIMREVPSFL-SL----MAFTVL---KLLGLLQSPEKGINSVLDAAL  213 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~-~~----~~~~~~---~~~~~~~~p~~~a~~~~~~~~  213 (266)
                      ||++.|++........ .+    ......   .......++++++..++.++.
T Consensus       175 pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  227 (257)
T PRK09291        175 PGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPLEQFDPQEMIDAMVEVIP  227 (257)
T ss_pred             cCcccccchhhhhhhhhhhcchhhHHHhhhhhhccccCCCHHHHHHHHHHHhc
Confidence            9999998764322111 00    000000   001123589999998886553

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.75  E-value=1.1e-17  Score=137.03  Aligned_cols=177  Identities=23%  Similarity=0.282  Sum_probs=143.8

Q ss_pred             hhhcccCCCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--C--CCcCCCcccchhhhhhhhh
Q 024553            2 ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--T--SSRLTPEGYDQMMSTNYIG   77 (266)
Q Consensus         2 ~~i~~~~~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~--~~~~~~~~~~~~~~~n~~~   77 (266)
                      +||.++++ .+++++.+|.++.+.+.+-+.+..+       ...+.+||||+|...  |  +.+.+.+.++..+.+|..+
T Consensus        91 kEI~~~~~-vev~~i~~Dft~~~~~ye~i~~~l~-------~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~  162 (312)
T KOG1014|consen   91 KEIEEKYK-VEVRIIAIDFTKGDEVYEKLLEKLA-------GLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILS  162 (312)
T ss_pred             HHHHHHhC-cEEEEEEEecCCCchhHHHHHHHhc-------CCceEEEEecccccCCCcHHHHhCchhhhhheeEEecch
Confidence            57888886 8999999999999884443333332       357889999999874  2  3355555789999999999


Q ss_pred             HHHHHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCC
Q 024553           78 AFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLD  157 (266)
Q Consensus        78 ~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~  157 (266)
                      ...+++.++|.|.+++ .|-||++||.++                    ..+.+.+..|+++|..+..++++|+.|+.  
T Consensus       163 ~~~~t~~ilp~M~~r~-~G~IvnigS~ag--------------------~~p~p~~s~ysasK~~v~~~S~~L~~Ey~--  219 (312)
T KOG1014|consen  163 VTLLTQLILPGMVERK-KGIIVNIGSFAG--------------------LIPTPLLSVYSASKAFVDFFSRCLQKEYE--  219 (312)
T ss_pred             HHHHHHHhhhhhhcCC-CceEEEeccccc--------------------cccChhHHHHHHHHHHHHHHHHHHHHHHH--
Confidence            9999999999999877 899999999997                    55889999999999999999999999998  


Q ss_pred             CCCCeEEEEecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccce
Q 024553          158 KSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVY  222 (266)
Q Consensus       158 ~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~  222 (266)
                       ..+|.|-++.|..|-|++.....+..            ...+|+..|+..+.-+-.....+|..
T Consensus       220 -~~gI~Vq~v~p~~VaTkm~~~~~~sl------------~~ps~~tfaksal~tiG~~~~TtGy~  271 (312)
T KOG1014|consen  220 -SKGIFVQSVIPYLVATKMAKYRKPSL------------FVPSPETFAKSALNTIGNASETTGYL  271 (312)
T ss_pred             -hcCeEEEEeehhheeccccccCCCCC------------cCcCHHHHHHHHHhhcCCcccCCCcc
Confidence             89999999999999999987654321            23489999998886555444555543

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.75  E-value=2.1e-17  Score=130.88  Aligned_cols=194  Identities=24%  Similarity=0.351  Sum_probs=154.6

Q ss_pred             hhhcccCC--CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC-C--------------------
Q 024553            2 ADITSRNK--DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA-T--------------------   58 (266)
Q Consensus         2 ~~i~~~~~--~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~-~--------------------   58 (266)
                      ++|.+.+|  ..++.++.+|+|+..+|.++..+|+.      ++.++|.++.|||++. +                    
T Consensus        50 ~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~di~~------rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt  123 (341)
T KOG1478|consen   50 AALKAFHPKSTIEVTYVLVDVSNMQSVFRASKDIKQ------RFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMT  123 (341)
T ss_pred             HHHHHhCCCceeEEEEEEEehhhHHHHHHHHHHHHH------HhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhc
Confidence            35677788  55788999999999999999999999      6689999999999862 1                    


Q ss_pred             --------CCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCC
Q 024553           59 --------SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCY  130 (266)
Q Consensus        59 --------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (266)
                              -..++.|++.+.|++||.|+|.+++.+.|++..+. ...+|++||..+   .+..++.+|++.        +
T Consensus       124 ~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll~~~~-~~~lvwtSS~~a---~kk~lsleD~q~--------~  191 (341)
T KOG1478|consen  124 SPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLLCHSD-NPQLVWTSSRMA---RKKNLSLEDFQH--------S  191 (341)
T ss_pred             CchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHhhcCC-CCeEEEEeeccc---ccccCCHHHHhh--------h
Confidence                    12467899999999999999999999999998776 559999999765   467788887664        5


Q ss_pred             ChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcccCCccCcchhHHHHH----HHHHHHHhhc---CCCHHH
Q 024553          131 PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLM----AFTVLKLLGL---LQSPEK  203 (266)
Q Consensus       131 ~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~----~~~~~~~~~~---~~~p~~  203 (266)
                      .+..+|..||.+...+..++.+.+.   +.|+...+++||..-|++....-....+.    .+.....++.   ..+|-.
T Consensus       192 kg~~pY~sSKrl~DlLh~A~~~~~~---~~g~~qyvv~pg~~tt~~~~~~l~~~~~~~~~~~fyl~rllgspwh~id~y~  268 (341)
T KOG1478|consen  192 KGKEPYSSSKRLTDLLHVALNRNFK---PLGINQYVVQPGIFTTNSFSEYLNPFTYFGMLCGFYLARLLGSPWHNIDPYK  268 (341)
T ss_pred             cCCCCcchhHHHHHHHHHHHhcccc---ccchhhhcccCceeecchhhhhhhhHHHHHHHHHHHHHHHhcCcccccCccc
Confidence            6667899999999999998888886   78999999999999998876643332221    1222233332   137889


Q ss_pred             HHHHHHHHhcCCC
Q 024553          204 GINSVLDAALAPP  216 (266)
Q Consensus       204 ~a~~~~~~~~~~~  216 (266)
                      .|.+.+|..+..+
T Consensus       269 aa~A~vw~~l~~p  281 (341)
T KOG1478|consen  269 AANAPVWVTLANP  281 (341)
T ss_pred             cccchhhhhhcCc
Confidence            9999999988655

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.74  E-value=6.2e-18  Score=131.21  Aligned_cols=114  Identities=29%  Similarity=0.462  Sum_probs=102.7

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.+++||+++.++++++++++.+      ..+++|++|||||...  +..+.+.+.|+++|++|+.+++.+.+.++|
T Consensus        51 ~~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  124 (167)
T PF00106_consen   51 GAKITFIECDLSDPESIRALIEEVIK------RFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP  124 (167)
T ss_dssp             TSEEEEEESETTSHHHHHHHHHHHHH------HHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccc------ccccccccccccccccccccccccchhhhhccccccceeeeeeehhee
Confidence            47899999999999999999999997      5689999999999985  445667899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhh
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNL  154 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~  154 (266)
                        +  + .++||++||..+                    ..+.+....|+++|+++..|++++++|+
T Consensus       125 --~--~-~g~iv~~sS~~~--------------------~~~~~~~~~Y~askaal~~~~~~la~e~  166 (167)
T PF00106_consen  125 --Q--G-GGKIVNISSIAG--------------------VRGSPGMSAYSASKAALRGLTQSLAAEL  166 (167)
T ss_dssp             --H--T-TEEEEEEEEGGG--------------------TSSSTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             --c--c-ccceEEecchhh--------------------ccCCCCChhHHHHHHHHHHHHHHHHHhc
Confidence              2  2 789999999997                    4578888999999999999999999986

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.71  E-value=3.1e-16  Score=129.26  Aligned_cols=146  Identities=21%  Similarity=0.189  Sum_probs=107.7

Q ss_pred             EEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCC
Q 024553           14 EAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP   93 (266)
Q Consensus        14 ~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~   93 (266)
                      .++.+|+++.+++.+             ..+++|++|||||... ..+.+.++|++++++|+.|++.+++.++|.|++++
T Consensus        61 ~~~~~D~~~~~~~~~-------------~~~~iDilVnnAG~~~-~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~  126 (245)
T PRK12367         61 EWIKWECGKEESLDK-------------QLASLDVLILNHGINP-GGRQDPENINKALEINALSSWRLLELFEDIALNNN  126 (245)
T ss_pred             eEEEeeCCCHHHHHH-------------hcCCCCEEEECCccCC-cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcc
Confidence            578999999987753             2367999999999853 34467889999999999999999999999997631


Q ss_pred             --CCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHH----hhCCCCCCCeEEEEe
Q 024553           94 --VPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHR----NLGLDKSRHVSVIAA  167 (266)
Q Consensus        94 --~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~----~~~~~~~~~i~v~~v  167 (266)
                        .++.+++.+|.++.                     ..+....|++||+++..+. ++++    ++.   ..+++++.+
T Consensus       127 ~~~g~~iiv~ss~a~~---------------------~~~~~~~Y~aSKaal~~~~-~l~~~l~~e~~---~~~i~v~~~  181 (245)
T PRK12367        127 SQIPKEIWVNTSEAEI---------------------QPALSPSYEISKRLIGQLV-SLKKNLLDKNE---RKKLIIRKL  181 (245)
T ss_pred             cCCCeEEEEEeccccc---------------------CCCCCchhHHHHHHHHHHH-HHHHHHHHhhc---ccccEEEEe
Confidence              12344444554431                     1123457999999986544 4444    444   689999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP  215 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~  215 (266)
                      .||.++|++...                 ...+|+++|+.+++++...
T Consensus       182 ~pg~~~t~~~~~-----------------~~~~~~~vA~~i~~~~~~~  212 (245)
T PRK12367        182 ILGPFRSELNPI-----------------GIMSADFVAKQILDQANLG  212 (245)
T ss_pred             cCCCcccccCcc-----------------CCCCHHHHHHHHHHHHhcC
Confidence            999999987321                 1348999999999776443

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.69  E-value=4.6e-16  Score=126.58  Aligned_cols=170  Identities=22%  Similarity=0.246  Sum_probs=128.4

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      .+.++.+|+++.+++.++++++          +++|++||+||...  +....+.+++++++++|+.+.+.+++.+++.+
T Consensus        48 ~~~~~~~D~~~~~~~~~~~~~~----------~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~  117 (227)
T PRK08219         48 GATPFPVDLTDPEAIAAAVEQL----------GRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPAL  117 (227)
T ss_pred             cceEEecCCCCHHHHHHHHHhc----------CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            4788999999999988877533          47999999999864  23456778899999999999999999999998


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      +++  .+++|++||..+.                    .+.++...|+.+|.+++.+++.++.++.   .. ++++++.|
T Consensus       118 ~~~--~~~~v~~ss~~~~--------------------~~~~~~~~y~~~K~a~~~~~~~~~~~~~---~~-i~~~~i~p  171 (227)
T PRK08219        118 RAA--HGHVVFINSGAGL--------------------RANPGWGSYAASKFALRALADALREEEP---GN-VRVTSVHP  171 (227)
T ss_pred             HhC--CCeEEEEcchHhc--------------------CcCCCCchHHHHHHHHHHHHHHHHHHhc---CC-ceEEEEec
Confidence            875  4799999998763                    2344567899999999999999998875   34 99999999


Q ss_pred             CcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceee
Q 024553          170 GVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFF  224 (266)
Q Consensus       170 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~  224 (266)
                      |.+.|+.........     ....+.+.+.+++++|+.++.++..+  ..|.+++
T Consensus       172 g~~~~~~~~~~~~~~-----~~~~~~~~~~~~~dva~~~~~~l~~~--~~~~~~~  219 (227)
T PRK08219        172 GRTDTDMQRGLVAQE-----GGEYDPERYLRPETVAKAVRFAVDAP--PDAHITE  219 (227)
T ss_pred             CCccchHhhhhhhhh-----ccccCCCCCCCHHHHHHHHHHHHcCC--CCCccce
Confidence            999887544322110     00011234579999999999765432  3344443

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.58  E-value=4.9e-14  Score=123.32  Aligned_cols=144  Identities=20%  Similarity=0.194  Sum_probs=106.5

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      .+..+.+|+++.+++.+.+             +++|++|||||+.. ..+.+.+++++++++|+.|++.+++.++|.|++
T Consensus       225 ~v~~v~~Dvsd~~~v~~~l-------------~~IDiLInnAGi~~-~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~  290 (406)
T PRK07424        225 PVKTLHWQVGQEAALAELL-------------EKVDILIINHGINV-HGERTPEAINKSYEVNTFSAWRLMELFFTTVKT  290 (406)
T ss_pred             CeEEEEeeCCCHHHHHHHh-------------CCCCEEEECCCcCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            4678899999998875432             57999999999853 245677889999999999999999999999987


Q ss_pred             CCC---CCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           92 SPV---PSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        92 ~~~---~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      ++.   ++.+|++|+ ++                     ...+....|++||+++..++. +.++     ..++.+..+.
T Consensus       291 ~~~~~~~~iiVn~Ss-a~---------------------~~~~~~~~Y~ASKaAl~~l~~-l~~~-----~~~~~I~~i~  342 (406)
T PRK07424        291 NRDKATKEVWVNTSE-AE---------------------VNPAFSPLYELSKRALGDLVT-LRRL-----DAPCVVRKLI  342 (406)
T ss_pred             cCCCCCCeEEEEEcc-cc---------------------ccCCCchHHHHHHHHHHHHHH-HHHh-----CCCCceEEEE
Confidence            541   234566654 32                     122334579999999999874 4443     3456777788


Q ss_pred             CCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Q 024553          169 PGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA  214 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~  214 (266)
                      ||.++|++...                 ...+|+++|+.+++++..
T Consensus       343 ~gp~~t~~~~~-----------------~~~spe~vA~~il~~i~~  371 (406)
T PRK07424        343 LGPFKSNLNPI-----------------GVMSADWVAKQILKLAKR  371 (406)
T ss_pred             eCCCcCCCCcC-----------------CCCCHHHHHHHHHHHHHC
Confidence            99999886321                 124999999999976644

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.56  E-value=2.1e-14  Score=147.63  Aligned_cols=132  Identities=19%  Similarity=0.093  Sum_probs=114.4

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||++|.++++++++++.+      . ++||+||||||+..  ...+.+.++|+++|++|+.|.+.+++.+.+
T Consensus      2093 G~~v~y~~~DVtD~~av~~av~~v~~------~-g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~~Ll~al~~ 2165 (2582)
T TIGR02813      2093 GASAEYASADVTNSVSVAATVQPLNK------T-LQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLLSLLAALNA 2165 (2582)
T ss_pred             CCcEEEEEccCCCHHHHHHHHHHHHH------h-CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45789999999999999999999987      4 57999999999873  456789999999999999999999988876


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .+     .++||++||..+..                    +.++...|+++|.++..+++.++.++     .+++|++|
T Consensus      2166 ~~-----~~~IV~~SSvag~~--------------------G~~gqs~YaaAkaaL~~la~~la~~~-----~~irV~sI 2215 (2582)
T TIGR02813      2166 EN-----IKLLALFSSAAGFY--------------------GNTGQSDYAMSNDILNKAALQLKALN-----PSAKVMSF 2215 (2582)
T ss_pred             hC-----CCeEEEEechhhcC--------------------CCCCcHHHHHHHHHHHHHHHHHHHHc-----CCcEEEEE
Confidence            54     34899999998743                    45667789999999999999999986     46999999


Q ss_pred             cCCcccCCccC
Q 024553          168 DPGVVKTNIMR  178 (266)
Q Consensus       168 ~PG~v~T~~~~  178 (266)
                      +||+++|++..
T Consensus      2216 ~wG~wdtgm~~ 2226 (2582)
T TIGR02813      2216 NWGPWDGGMVN 2226 (2582)
T ss_pred             ECCeecCCccc
Confidence            99999998753

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.49  E-value=3.1e-13  Score=105.20  Aligned_cols=126  Identities=17%  Similarity=0.201  Sum_probs=102.8

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.+|+++.++++++++++..      ..+++|++|||||...  +....+.++++.++++|+.+++.+++.+.+
T Consensus        52 ~~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  125 (180)
T smart00822       52 GAEVTVVACDVADRAALAAALAAIPA------RLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRD  125 (180)
T ss_pred             CCeEEEEECCCCCHHHHHHHHHHHHH------HcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhcc
Confidence            34688999999999999999999987      5689999999999763  345667888999999999999999998832


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                          .+ .+++++++|..+.                    .+.+....|+.+|.++..+++.++       ..++.++.+
T Consensus       126 ----~~-~~~ii~~ss~~~~--------------------~~~~~~~~y~~sk~~~~~~~~~~~-------~~~~~~~~~  173 (180)
T smart00822      126 ----LP-LDFFVLFSSVAGV--------------------LGNPGQANYAAANAFLDALAAHRR-------ARGLPATSI  173 (180)
T ss_pred             ----CC-cceEEEEccHHHh--------------------cCCCCchhhHHHHHHHHHHHHHHH-------hcCCceEEE
Confidence                23 5799999998763                    244566789999999999987654       346679999


Q ss_pred             cCCccc
Q 024553          168 DPGVVK  173 (266)
Q Consensus       168 ~PG~v~  173 (266)
                      .||++.
T Consensus       174 ~~g~~~  179 (180)
T smart00822      174 NWGAWA  179 (180)
T ss_pred             eecccc
Confidence            999875

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.44  E-value=9.2e-12  Score=106.75  Aligned_cols=203  Identities=14%  Similarity=0.091  Sum_probs=128.1

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCC-----------------------c-----
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS-----------------------R-----   61 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~-----------------------~-----   61 (266)
                      +..+..+.||+++.+++.++++++.+      .+++||+||||+|......                       +     
T Consensus       102 G~~a~~i~~DVss~E~v~~lie~I~e------~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~  175 (398)
T PRK13656        102 GLYAKSINGDAFSDEIKQKVIELIKQ------DLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDV  175 (398)
T ss_pred             CCceEEEEcCCCCHHHHHHHHHHHHH------hcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccc
Confidence            34678899999999999999999999      6799999999999762111                       0     


Q ss_pred             --------CCCcccchhhhhhhhhH---HHH--HHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCC
Q 024553           62 --------LTPEGYDQMMSTNYIGA---FFL--TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSK  128 (266)
Q Consensus        62 --------~~~~~~~~~~~~n~~~~---~~l--~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~  128 (266)
                              .+.++++.++  .+.|.   ...  .....+.|.+   ++++|..|++..                    ++
T Consensus       176 i~~~s~~~~~~~ei~~Tv--~vMggedw~~Wi~al~~a~lla~---g~~~va~TY~G~--------------------~~  230 (398)
T PRK13656        176 IIEVTVEPATEEEIADTV--KVMGGEDWELWIDALDEAGVLAE---GAKTVAYSYIGP--------------------EL  230 (398)
T ss_pred             eeEEEEeeCCHHHHHHHH--HhhccchHHHHHHHHHhcccccC---CcEEEEEecCCc--------------------ce
Confidence                    1111122222  22222   222  3334444543   689999999875                    44


Q ss_pred             CCChh--hcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcccCCccCcchhHHH--HHHHHHHHHhhcCCCHHHH
Q 024553          129 CYPCA--RIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS--LMAFTVLKLLGLLQSPEKG  204 (266)
Q Consensus       129 ~~~~~--~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~--~~~~~~~~~~~~~~~p~~~  204 (266)
                      .++.+  ..-+.+|++++.-+++|+.+++   +.++++|++.+|.+.|......+....  ...+..++.-+   +-|.+
T Consensus       231 t~p~Y~~g~mG~AKa~LE~~~r~La~~L~---~~giran~i~~g~~~T~Ass~Ip~~~ly~~~l~kvmk~~g---~he~~  304 (398)
T PRK13656        231 THPIYWDGTIGKAKKDLDRTALALNEKLA---AKGGDAYVSVLKAVVTQASSAIPVMPLYISLLFKVMKEKG---THEGC  304 (398)
T ss_pred             eecccCCchHHHHHHHHHHHHHHHHHHhh---hcCCEEEEEecCcccchhhhcCCCcHHHHHHHHHHHHhcC---CCCCh
Confidence            55555  3679999999999999999998   889999999999999988776543321  22233333322   44444


Q ss_pred             HHHHHHHhcCCCCcccceeecCCCccccCCccccCHHHHH---HHHHH
Q 024553          205 INSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAG---ELWTT  249 (266)
Q Consensus       205 a~~~~~~~~~~~~~~G~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~  249 (266)
                      .+-+..+|...=...|.--..+...-+..++|-.+++.+.   .+|+.
T Consensus       305 ieq~~rl~~~~ly~~~~~~~~d~~~r~r~d~~el~~~vq~~v~~~~~~  352 (398)
T PRK13656        305 IEQIYRLFSERLYRDGAIPEVDEEGRLRLDDWELRPDVQAAVRELWPQ  352 (398)
T ss_pred             HHHHHHHHHHhcccCCCCCCcCCcCCcccchhhcCHHHHHHHHHHHHH
Confidence            4444444432211111111012333466778888877664   45544

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.42  E-value=3.5e-12  Score=109.54  Aligned_cols=170  Identities=18%  Similarity=0.111  Sum_probs=115.5

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .++.++.+|+++.+++.++++             .+|+|||+||.....  ......++++++|+.|++++++.+.+.  
T Consensus        53 ~~~~~v~~Dl~d~~~l~~~~~-------------~iD~Vih~Ag~~~~~--~~~~~~~~~~~~Nv~g~~~ll~aa~~~--  115 (324)
T TIGR03589        53 PCLRFFIGDVRDKERLTRALR-------------GVDYVVHAAALKQVP--AAEYNPFECIRTNINGAQNVIDAAIDN--  115 (324)
T ss_pred             CcEEEEEccCCCHHHHHHHHh-------------cCCEEEECcccCCCc--hhhcCHHHHHHHHHHHHHHHHHHHHHc--
Confidence            468899999999998877652             489999999975321  112234579999999999999998652  


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                        + .++||++||...                       ..+...|+.+|++.+.+++.++....   ..+++++.+.||
T Consensus       116 --~-~~~iV~~SS~~~-----------------------~~p~~~Y~~sK~~~E~l~~~~~~~~~---~~gi~~~~lR~g  166 (324)
T TIGR03589       116 --G-VKRVVALSTDKA-----------------------ANPINLYGATKLASDKLFVAANNISG---SKGTRFSVVRYG  166 (324)
T ss_pred             --C-CCEEEEEeCCCC-----------------------CCCCCHHHHHHHHHHHHHHHHHhhcc---ccCcEEEEEeec
Confidence              2 469999999643                       12235699999999999999887765   689999999999


Q ss_pred             cccCCccCcchhHHHHHHHHH-HHHh------hcCCCHHHHHHHHHHHhcCCCCcccceeecCCCc
Q 024553          171 VVKTNIMREVPSFLSLMAFTV-LKLL------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGR  229 (266)
Q Consensus       171 ~v~T~~~~~~~~~~~~~~~~~-~~~~------~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~  229 (266)
                      .+.++-..-.+.......... ..++      +.+..++|++++++.++...  ..|..|. +.+.
T Consensus       167 ~v~G~~~~~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~~--~~~~~~~-~~~~  229 (324)
T TIGR03589       167 NVVGSRGSVVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLERM--LGGEIFV-PKIP  229 (324)
T ss_pred             ceeCCCCCcHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhhC--CCCCEEc-cCCC
Confidence            998864321111111111010 0011      13568999999998766432  2345453 3443

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.30  E-value=2.8e-11  Score=109.03  Aligned_cols=171  Identities=13%  Similarity=0.013  Sum_probs=114.0

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .++.++.+|+++.+++.+.+             +++|+||||+|....    ...++...+++|+.|..++++.+...  
T Consensus       138 ~~v~iV~gDLtD~esI~~aL-------------ggiDiVVn~AG~~~~----~v~d~~~~~~VN~~Gt~nLl~Aa~~a--  198 (576)
T PLN03209        138 EKLEIVECDLEKPDQIGPAL-------------GNASVVICCIGASEK----EVFDVTGPYRIDYLATKNLVDAATVA--  198 (576)
T ss_pred             CceEEEEecCCCHHHHHHHh-------------cCCCEEEEccccccc----cccchhhHHHHHHHHHHHHHHHHHHh--
Confidence            35889999999998875532             579999999997531    12246788999999999998887543  


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                        + .++||++||.++..                   ...+. ..|. +|.++..+.+.+...+.   ..+|+++.|.||
T Consensus       199 --g-VgRIV~VSSiga~~-------------------~g~p~-~~~~-sk~~~~~~KraaE~~L~---~sGIrvTIVRPG  251 (576)
T PLN03209        199 --K-VNHFILVTSLGTNK-------------------VGFPA-AILN-LFWGVLCWKRKAEEALI---ASGLPYTIVRPG  251 (576)
T ss_pred             --C-CCEEEEEccchhcc-------------------cCccc-cchh-hHHHHHHHHHHHHHHHH---HcCCCEEEEECC
Confidence              3 57999999987521                   01111 1133 67777777777777776   689999999999


Q ss_pred             cccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCC
Q 024553          171 VVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKG  228 (266)
Q Consensus       171 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g  228 (266)
                      ++.|++...... ..........++++..+++++|+.+++++...+...++.+..-.+
T Consensus       252 ~L~tp~d~~~~t-~~v~~~~~d~~~gr~isreDVA~vVvfLasd~~as~~kvvevi~~  308 (576)
T PLN03209        252 GMERPTDAYKET-HNLTLSEEDTLFGGQVSNLQVAELMACMAKNRRLSYCKVVEVIAE  308 (576)
T ss_pred             eecCCccccccc-cceeeccccccCCCccCHHHHHHHHHHHHcCchhccceEEEEEeC
Confidence            998875432100 000000001234556799999999996655555566776653333

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.29  E-value=2.8e-10  Score=98.93  Aligned_cols=194  Identities=11%  Similarity=0.061  Sum_probs=123.2

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .++.++.+|+++.+++.+++++           .++|+|||+||....  ..+.+.+++.+++|+.++..+++.+.+.+.
T Consensus        51 ~~~~~~~~Dl~d~~~~~~~~~~-----------~~~D~Vih~A~~~~~--~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~  117 (355)
T PRK10217         51 ERFAFEKVDICDRAELARVFTE-----------HQPDCVMHLAAESHV--DRSIDGPAAFIETNIVGTYTLLEAARAYWN  117 (355)
T ss_pred             CceEEEECCCcChHHHHHHHhh-----------cCCCEEEECCcccCc--chhhhChHHHHHHhhHHHHHHHHHHHHhhh
Confidence            3578899999999998777642           258999999997532  233456789999999999999999987642


Q ss_pred             c---C-CCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           91 N---S-PVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        91 ~---~-~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      .   . ....++|++||...+......       .....+..+..+...|+.||.+.+.+++.+++++      ++.+..
T Consensus       118 ~~~~~~~~~~~~i~~SS~~vyg~~~~~-------~~~~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~------~~~~~i  184 (355)
T PRK10217        118 ALTEDKKSAFRFHHISTDEVYGDLHST-------DDFFTETTPYAPSSPYSASKASSDHLVRAWLRTY------GLPTLI  184 (355)
T ss_pred             cccccccCceEEEEecchhhcCCCCCC-------CCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh------CCCeEE
Confidence            1   1 113589999997654311000       0001122233445789999999999999987775      456677


Q ss_pred             ecCCcccCCccCc--chhHH-HHHHHH-HHHH------hhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          167 ADPGVVKTNIMRE--VPSFL-SLMAFT-VLKL------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       167 v~PG~v~T~~~~~--~~~~~-~~~~~~-~~~~------~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      +.|+.+..+....  ..+.. ...... ....      ...+...+|++++++.++.. + ..|..|+..+++.+.
T Consensus       185 ~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~~-~-~~~~~yni~~~~~~s  258 (355)
T PRK10217        185 TNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT-G-KVGETYNIGGHNERK  258 (355)
T ss_pred             EeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHHHHhc-C-CCCCeEEeCCCCccc
Confidence            7788777665321  10100 000000 0000      12357899999999865543 3 346667766776654

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.29  E-value=3.4e-10  Score=95.08  Aligned_cols=211  Identities=16%  Similarity=0.066  Sum_probs=137.2

Q ss_pred             EEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCC
Q 024553           14 EAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP   93 (266)
Q Consensus        14 ~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~   93 (266)
                      .++.+|+++.+++.++++             ..|+|||+|+......   ....++.+++|+.|+-++++++...    +
T Consensus        48 ~~~~~Di~d~~~l~~a~~-------------g~d~V~H~Aa~~~~~~---~~~~~~~~~vNV~GT~nvl~aa~~~----~  107 (280)
T PF01073_consen   48 EYIQGDITDPESLEEALE-------------GVDVVFHTAAPVPPWG---DYPPEEYYKVNVDGTRNVLEAARKA----G  107 (280)
T ss_pred             eEEEeccccHHHHHHHhc-------------CCceEEEeCccccccC---cccHHHHHHHHHHHHHHHHHHHHHc----C
Confidence            399999999999988762             5799999999864322   3446889999999999999988542    3


Q ss_pred             CCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHH-hhCCCCCCCeEEEEecCCcc
Q 024553           94 VPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHR-NLGLDKSRHVSVIAADPGVV  172 (266)
Q Consensus        94 ~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~-~~~~~~~~~i~v~~v~PG~v  172 (266)
                       -.++|++||..+.+....   ..++..-++....+......|+.||+..+.++..... .+.  ....+...++.|..|
T Consensus       108 -VkrlVytSS~~vv~~~~~---~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~--~g~~l~t~~lRP~~I  181 (280)
T PF01073_consen  108 -VKRLVYTSSISVVFDNYK---GDPIINGDEDTPYPSSPLDPYAESKALAEKAVLEANGSELK--NGGRLRTCALRPAGI  181 (280)
T ss_pred             -CCEEEEEcCcceeEeccC---CCCcccCCcCCcccccccCchHHHHHHHHHHHHhhcccccc--cccceeEEEEeccEE
Confidence             569999999987553110   0111111111112223557899999999999876554 121  134689999999999


Q ss_pred             cCCccCcchhHHH-HHHHH-HHHHhh------cCCCHHHHHHHHHHHh---cCC---CCcccceeecCCCccccCCcccc
Q 024553          173 KTNIMREVPSFLS-LMAFT-VLKLLG------LLQSPEKGINSVLDAA---LAP---PETSGVYFFGGKGRTVNSSALSF  238 (266)
Q Consensus       173 ~T~~~~~~~~~~~-~~~~~-~~~~~~------~~~~p~~~a~~~~~~~---~~~---~~~~G~~~~~~~g~~~~~~~~~~  238 (266)
                      ..+......+... ..... ....++      .+...+++|.+++-+.   +.+   +...|+.|+..+++++..     
T Consensus       182 yGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~~~-----  256 (280)
T PF01073_consen  182 YGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALLEPGKPERVAGQAYFITDGEPVPS-----  256 (280)
T ss_pred             eCcccccccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhccccccccCCCcEEEEECCCccCc-----
Confidence            8886544333221 11111 111111      2457999999997543   222   356788888778887753     


Q ss_pred             CHHHHHHHHHHHHHHhhhcccccc
Q 024553          239 NSKLAGELWTTSCNLFINSQLACR  262 (266)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~  262 (266)
                             +|+....++++.|-+..
T Consensus       257 -------~~~f~~~~~~~~G~~~~  273 (280)
T PF01073_consen  257 -------FWDFMRPLWEALGYPPP  273 (280)
T ss_pred             -------HHHHHHHHHHHCCCCCC
Confidence                   57777777777665543

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.29  E-value=1.5e-10  Score=99.42  Aligned_cols=184  Identities=14%  Similarity=0.166  Sum_probs=117.8

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .++.++.+|+++.+++.++++             .+|+||||||....  ..+.+.+.+.+++|+.+++.+++.+.+.+.
T Consensus        56 ~~~~~~~~D~~d~~~~~~~~~-------------~~d~vih~A~~~~~--~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~  120 (325)
T PLN02989         56 ERLKLFKADLLDEGSFELAID-------------GCETVFHTASPVAI--TVKTDPQVELINPAVNGTINVLRTCTKVSS  120 (325)
T ss_pred             CceEEEeCCCCCchHHHHHHc-------------CCCEEEEeCCCCCC--CCCCChHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            468899999999998877662             48999999997532  334556789999999999999999877531


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCC------hhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEE
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYP------CARIYEYSKLCLLIFSYELHRNLGLDKSRHVSV  164 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v  164 (266)
                          .++||++||..++...........    ...+.....      ....|+.+|.+.+.+++.++++      .++.+
T Consensus       121 ----~~~iv~~SS~~~~~~~~~~~~~~~----~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~------~~~~~  186 (325)
T PLN02989        121 ----VKRVILTSSMAAVLAPETKLGPND----VVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKD------NEIDL  186 (325)
T ss_pred             ----ceEEEEecchhheecCCccCCCCC----ccCcCCCCchhHhcccccchHHHHHHHHHHHHHHHHH------cCCeE
Confidence                469999999876432210000000    001111111      1256999999999999887765      37888


Q ss_pred             EEecCCcccCCccCcchhHH-HHHHHHH--HHHh----hcCCCHHHHHHHHHHHhcCCCCcccceee
Q 024553          165 IAADPGVVKTNIMREVPSFL-SLMAFTV--LKLL----GLLQSPEKGINSVLDAALAPPETSGVYFF  224 (266)
Q Consensus       165 ~~v~PG~v~T~~~~~~~~~~-~~~~~~~--~~~~----~~~~~p~~~a~~~~~~~~~~~~~~G~~~~  224 (266)
                      +.+.|+.+.++......... .......  ..+.    +.+..++|+|++++.++..+ ...|.|..
T Consensus       187 ~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~~~~r~~i~v~Dva~a~~~~l~~~-~~~~~~ni  252 (325)
T PLN02989        187 IVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHHRFVDVRDVALAHVKALETP-SANGRYII  252 (325)
T ss_pred             EEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCCCcCcCeeEHHHHHHHHHHHhcCc-ccCceEEE
Confidence            99999999888654311110 0111000  0111    23456899999998665443 34565543

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.27  E-value=1.4e-10  Score=100.35  Aligned_cols=196  Identities=11%  Similarity=0.030  Sum_probs=119.2

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      ..+.++.+|+++.+++.++++.+           .+|+|||+||.....  ...+..+..+++|+.++..+++.+.+...
T Consensus        60 ~~~~~~~~Dl~d~~~~~~~~~~~-----------~~d~Vih~A~~~~~~--~~~~~~~~~~~~N~~gt~~ll~~~~~~~~  126 (340)
T PLN02653         60 ARMKLHYGDLSDASSLRRWLDDI-----------KPDEVYNLAAQSHVA--VSFEMPDYTADVVATGALRLLEAVRLHGQ  126 (340)
T ss_pred             CceEEEEecCCCHHHHHHHHHHc-----------CCCEEEECCcccchh--hhhhChhHHHHHHHHHHHHHHHHHHHhcc
Confidence            35889999999999998877643           489999999985321  22344578889999999999999988765


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                      +++...++|++||...+......+          .+..+..+...|+.+|.+.+.+++.++.++...-...+.++.+.|+
T Consensus       127 ~~~~~~~~v~~Ss~~vyg~~~~~~----------~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~  196 (340)
T PLN02653        127 ETGRQIKYYQAGSSEMYGSTPPPQ----------SETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPR  196 (340)
T ss_pred             ccccceeEEEeccHHHhCCCCCCC----------CCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCC
Confidence            422123788998876543221111          1223444566899999999999999988864100124455666676


Q ss_pred             cccCCccCcchhHHHHHHHHH-HH-------HhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          171 VVKTNIMREVPSFLSLMAFTV-LK-------LLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       171 ~v~T~~~~~~~~~~~~~~~~~-~~-------~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      ...+-+............... ..       ..+.+...+|+|++++.++...  ..|. |+.+.|+.++
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~~~~~~~~--~~~~-yni~~g~~~s  263 (340)
T PLN02653        197 RGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAMWLMLQQE--KPDD-YVVATEESHT  263 (340)
T ss_pred             CCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHHHHHHHhcC--CCCc-EEecCCCcee
Confidence            432211111100000000000 00       1123568999999999665432  2344 4446666554

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.22  E-value=1.7e-09  Score=93.86  Aligned_cols=174  Identities=14%  Similarity=0.028  Sum_probs=114.7

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      ++.++.+|+++.+++.+++++.           .+|+|||+||...  ...+.+++...+++|+.+++.+++.+...   
T Consensus        53 ~~~~~~~Dl~~~~~~~~~~~~~-----------~~d~vih~A~~~~--~~~~~~~~~~~~~~N~~g~~~ll~a~~~~---  116 (349)
T TIGR02622        53 KIEDHFGDIRDAAKLRKAIAEF-----------KPEIVFHLAAQPL--VRKSYADPLETFETNVMGTVNLLEAIRAI---  116 (349)
T ss_pred             CceEEEccCCCHHHHHHHHhhc-----------CCCEEEECCcccc--cccchhCHHHHHHHhHHHHHHHHHHHHhc---
Confidence            5778999999999988877532           5899999999642  23455678899999999999999987431   


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCC---CCeEEEEec
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKS---RHVSVIAAD  168 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~---~~i~v~~v~  168 (266)
                      .. .+++|++||...+.......        ...+..+..+...|+.+|.+.+.+++.++.++..  .   .+++++.+.
T Consensus       117 ~~-~~~iv~~SS~~vyg~~~~~~--------~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~--~~~~~~i~~~~lR  185 (349)
T TIGR02622       117 GS-VKAVVNVTSDKCYRNDEWVW--------GYRETDPLGGHDPYSSSKACAELVIASYRSSFFG--VANFHGIKIASAR  185 (349)
T ss_pred             CC-CCEEEEEechhhhCCCCCCC--------CCccCCCCCCCCcchhHHHHHHHHHHHHHHHhhc--ccccCCCcEEEEc
Confidence            11 36999999976553210000        0111223344567999999999999999888741  1   389999999


Q ss_pred             CCcccCCccCcchhHHHHHHHHHH----------HHhhcCCCHHHHHHHHHHHh
Q 024553          169 PGVVKTNIMREVPSFLSLMAFTVL----------KLLGLLQSPEKGINSVLDAA  212 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~~~~~----------~~~~~~~~p~~~a~~~~~~~  212 (266)
                      |+.+.++.................          ...+.+...+|++++++.++
T Consensus       186 ~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~v~D~a~a~~~~~  239 (349)
T TIGR02622       186 AGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQHVLEPLSGYLLLA  239 (349)
T ss_pred             cCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcccceeeHHHHHHHHHHHH
Confidence            999988743111000001111000          01123467889999988554

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02583 cinnamoyl-CoA reductase

Probab=99.21  E-value=5.9e-10  Score=94.61  Aligned_cols=181  Identities=14%  Similarity=0.059  Sum_probs=113.1

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .++.++.+|+++.+++..++             ..+|.++|.++....   . .+.+++++++|+.|++.+++.+.+.+.
T Consensus        57 ~~~~~~~~Dl~d~~~~~~~l-------------~~~d~v~~~~~~~~~---~-~~~~~~~~~~nv~gt~~ll~aa~~~~~  119 (297)
T PLN02583         57 ERLKVFDVDPLDYHSILDAL-------------KGCSGLFCCFDPPSD---Y-PSYDEKMVDVEVRAAHNVLEACAQTDT  119 (297)
T ss_pred             CceEEEEecCCCHHHHHHHH-------------cCCCEEEEeCccCCc---c-cccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            36889999999998886544             247888887654321   1 124678999999999999999977531


Q ss_pred             cCCCCCeEEEEcCCcccccc-cccCCccccccCcccCCCCCC------hhhcchHhHHHHHHHHHHHHHhhCCCCCCCeE
Q 024553           91 NSPVPSRIVNVTSFTHRNVF-NAQVNNETITGKFFLRSKCYP------CARIYEYSKLCLLIFSYELHRNLGLDKSRHVS  163 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~-~~~~~~~~~~~~~~~~~~~~~------~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~  163 (266)
                          .++||++||..+.... .....     .....+.....      ....|+.||...+.++..++++      .++.
T Consensus       120 ----v~riV~~SS~~a~~~~~~~~~~-----~~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~------~gi~  184 (297)
T PLN02583        120 ----IEKVVFTSSLTAVIWRDDNIST-----QKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMD------RGVN  184 (297)
T ss_pred             ----ccEEEEecchHheecccccCCC-----CCCCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHH------hCCc
Confidence                3699999998764311 00000     00011111111      1125999999999999877655      4789


Q ss_pred             EEEecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceee
Q 024553          164 VIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFF  224 (266)
Q Consensus       164 v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~  224 (266)
                      ++.+.|++|.++......................+..++++|++++.++. .+...|+|+.
T Consensus       185 ~v~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~v~V~Dva~a~~~al~-~~~~~~r~~~  244 (297)
T PLN02583        185 MVSINAGLLMGPSLTQHNPYLKGAAQMYENGVLVTVDVNFLVDAHIRAFE-DVSSYGRYLC  244 (297)
T ss_pred             EEEEcCCcccCCCCCCchhhhcCCcccCcccCcceEEHHHHHHHHHHHhc-CcccCCcEEE
Confidence            99999999988765321111000000000001135689999999996665 3455677765

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.20  E-value=1.7e-09  Score=88.48  Aligned_cols=205  Identities=13%  Similarity=0.093  Sum_probs=136.4

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      ..++.|+++|++|.+.+.+++++           ..+|++||-|+-..  .+-+.++-+..+++|++|++.|++++..+.
T Consensus        50 ~~~~~fv~~DI~D~~~v~~~~~~-----------~~~D~VvhfAAESH--VDRSI~~P~~Fi~TNv~GT~~LLEaar~~~  116 (340)
T COG1088          50 SPRYRFVQGDICDRELVDRLFKE-----------YQPDAVVHFAAESH--VDRSIDGPAPFIQTNVVGTYTLLEAARKYW  116 (340)
T ss_pred             CCCceEEeccccCHHHHHHHHHh-----------cCCCeEEEechhcc--ccccccChhhhhhcchHHHHHHHHHHHHhc
Confidence            45899999999999999888853           36899999998753  334566678899999999999999997776


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      .+    -|++.||.-..++..       ...+..+.+..++.+..+|++||++..++++++.+.+      |+.++...+
T Consensus       117 ~~----frf~HISTDEVYG~l-------~~~~~~FtE~tp~~PsSPYSASKAasD~lVray~~TY------glp~~Itrc  179 (340)
T COG1088         117 GK----FRFHHISTDEVYGDL-------GLDDDAFTETTPYNPSSPYSASKAASDLLVRAYVRTY------GLPATITRC  179 (340)
T ss_pred             cc----ceEEEeccccccccc-------cCCCCCcccCCCCCCCCCcchhhhhHHHHHHHHHHHc------CCceEEecC
Confidence            43    489999986654421       1222245567889999999999999999999999987      455555555


Q ss_pred             CcccCCccCcchhHHHHHHHHHHHH--------------hhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCccccCCc
Q 024553          170 GVVKTNIMREVPSFLSLMAFTVLKL--------------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSA  235 (266)
Q Consensus       170 G~v~T~~~~~~~~~~~~~~~~~~~~--------------~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~~~~  235 (266)
                      .--..|..-  +.  ++........              .+.....++=++++-.++..  ...|..|+.+++....   
T Consensus       180 SNNYGPyqf--pE--KlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~k--g~~GE~YNIgg~~E~~---  250 (340)
T COG1088         180 SNNYGPYQF--PE--KLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTK--GKIGETYNIGGGNERT---  250 (340)
T ss_pred             CCCcCCCcC--ch--hhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhc--CcCCceEEeCCCccch---
Confidence            444433321  11  1111111111              11234688888888744433  3338888877665432   


Q ss_pred             cccCHHHHHHHHHHHHHHhhhcccc
Q 024553          236 LSFNSKLAGELWTTSCNLFINSQLA  260 (266)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~  260 (266)
                             --.+-+...+++++..+.
T Consensus       251 -------Nlevv~~i~~~l~~~~~~  268 (340)
T COG1088         251 -------NLEVVKTICELLGKDKPD  268 (340)
T ss_pred             -------HHHHHHHHHHHhCccccc
Confidence                   122455556666665554

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.18  E-value=2.5e-09  Score=92.86  Aligned_cols=200  Identities=11%  Similarity=0.038  Sum_probs=121.5

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .++.++.+|+++.+++.+++++           ..+|+|||+||....  ....+..++.+++|+.|+..+++.+.++|.
T Consensus        50 ~~~~~~~~Dl~d~~~~~~~~~~-----------~~~d~vih~A~~~~~--~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~  116 (352)
T PRK10084         50 ERYVFEHADICDRAELDRIFAQ-----------HQPDAVMHLAAESHV--DRSITGPAAFIETNIVGTYVLLEAARNYWS  116 (352)
T ss_pred             CceEEEEecCCCHHHHHHHHHh-----------cCCCEEEECCcccCC--cchhcCchhhhhhhhHHHHHHHHHHHHhcc
Confidence            4578899999999998887753           268999999997532  112345678999999999999999988764


Q ss_pred             cC----CCCCeEEEEcCCccccccc--ccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEE
Q 024553           91 NS----PVPSRIVNVTSFTHRNVFN--AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSV  164 (266)
Q Consensus        91 ~~----~~~~~iv~vsS~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v  164 (266)
                      ..    +...++|++||...+....  ....... ......+..+..+...|+.+|.+.+.+++.+++++      ++.+
T Consensus       117 ~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~-~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~------g~~~  189 (352)
T PRK10084        117 ALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSE-ELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY------GLPT  189 (352)
T ss_pred             ccccccccceeEEEecchhhcCCCCccccccccc-cCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh------CCCE
Confidence            21    1134899999976543211  0000000 00011223344455689999999999999988775      3455


Q ss_pred             EEecCCcccCCccCc--chhHH-HHHHHH-HHHH------hhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          165 IAADPGVVKTNIMRE--VPSFL-SLMAFT-VLKL------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       165 ~~v~PG~v~T~~~~~--~~~~~-~~~~~~-~~~~------~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      ..+.|+.+..+....  ..+.. ...... ....      ...+..+++++++++.++. .+ ..|..|+.++++...
T Consensus       190 vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~a~~~~l~-~~-~~~~~yni~~~~~~s  265 (352)
T PRK10084        190 IVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALYKVVT-EG-KAGETYNIGGHNEKK  265 (352)
T ss_pred             EEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHh-cC-CCCceEEeCCCCcCc
Confidence            556777776654211  11110 000000 0000      1125689999999985543 33 345556656666554

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.13  E-value=1.4e-09  Score=92.79  Aligned_cols=188  Identities=11%  Similarity=0.046  Sum_probs=118.7

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      .+.++.+|+++.+++.++++.           ..+|+|||+||....  ..+.+..+..+++|+.++..+++.+...+. 
T Consensus        51 ~~~~~~~Dl~~~~~~~~~~~~-----------~~~d~vi~~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-  116 (317)
T TIGR01181        51 RYRFVKGDIGDRELVSRLFTE-----------HQPDAVVHFAAESHV--DRSISGPAAFIETNVVGTYTLLEAVRKYWH-  116 (317)
T ss_pred             CcEEEEcCCcCHHHHHHHHhh-----------cCCCEEEEcccccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHhcCC-
Confidence            578899999999999887742           258999999997532  223456778899999999999988755432 


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCc
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV  171 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~  171 (266)
                         ..++|++||...+...... .       ...+..+..+...|+.+|.+.+.+++.++.+.      ++.++.+.|+.
T Consensus       117 ---~~~~i~~Ss~~v~g~~~~~-~-------~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------~~~~~i~R~~~  179 (317)
T TIGR01181       117 ---EFRFHHISTDEVYGDLEKG-D-------AFTETTPLAPSSPYSASKAASDHLVRAYHRTY------GLPALITRCSN  179 (317)
T ss_pred             ---CceEEEeeccceeCCCCCC-C-------CcCCCCCCCCCCchHHHHHHHHHHHHHHHHHh------CCCeEEEEecc
Confidence               3489999997654321110 0       01112233345679999999999999887764      67788889998


Q ss_pred             ccCCccCc--chhHH-HHHHHH-HHHHh------hcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          172 VKTNIMRE--VPSFL-SLMAFT-VLKLL------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       172 v~T~~~~~--~~~~~-~~~~~~-~~~~~------~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      +..+....  ..+.. ...... ....+      ..+...+++++++..++..  ...|..|..++++.+.
T Consensus       180 i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~--~~~~~~~~~~~~~~~s  248 (317)
T TIGR01181       180 NYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEK--GRVGETYNIGGGNERT  248 (317)
T ss_pred             ccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcC--CCCCceEEeCCCCcee
Confidence            87664321  11110 000000 00000      1244789999999865532  2345556655665554

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.12  E-value=2.2e-09  Score=92.98  Aligned_cols=195  Identities=11%  Similarity=0.042  Sum_probs=114.2

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      ..+.++.+|+++.+++.++++.+           ++|+|||+|+.....  ...+.-...+++|+.|+..+++++.+.-.
T Consensus        55 ~~~~~~~~Dl~d~~~l~~~~~~~-----------~~d~ViH~Aa~~~~~--~~~~~~~~~~~~n~~gt~~ll~a~~~~~~  121 (343)
T TIGR01472        55 ARMKLHYGDLTDSSNLRRIIDEI-----------KPTEIYNLAAQSHVK--VSFEIPEYTADVDGIGTLRLLEAVRTLGL  121 (343)
T ss_pred             cceeEEEeccCCHHHHHHHHHhC-----------CCCEEEECCcccccc--hhhhChHHHHHHHHHHHHHHHHHHHHhCC
Confidence            35889999999999988877532           479999999975421  12223367788999999999999876421


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                      +.  ..++|++||...+......         ...+..+..+...|+.||.+.+.+++.+++++...-...+.++.+.|+
T Consensus       122 ~~--~~~~v~~SS~~vyg~~~~~---------~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~  190 (343)
T TIGR01472       122 IK--SVKFYQASTSELYGKVQEI---------PQNETTPFYPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPR  190 (343)
T ss_pred             Cc--CeeEEEeccHHhhCCCCCC---------CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCC
Confidence            11  2489999997655421100         111223344556899999999999999988763100112334455565


Q ss_pred             cccCCccCcchhHHHHHHHHH--------HHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          171 VVKTNIMREVPSFLSLMAFTV--------LKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       171 ~v~T~~~~~~~~~~~~~~~~~--------~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      .-...+...............        ......+...+|++++++.++..+  ..|. |+.+.|+.++
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~~~~~~--~~~~-yni~~g~~~s  257 (343)
T TIGR01472       191 RGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWLMLQQD--KPDD-YVIATGETHS  257 (343)
T ss_pred             CCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHHHHHHhcC--CCcc-EEecCCCcee
Confidence            221111111111000000000        011124568999999998655432  2354 4556666654

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.11  E-value=2e-10  Score=90.41  Aligned_cols=125  Identities=21%  Similarity=0.259  Sum_probs=90.6

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++++++.++++++.+      ..++|+.|||+||...  +..+.+.+.++.++...+.|...+.+.+.+
T Consensus        52 g~~v~~~~~Dv~d~~~v~~~~~~~~~------~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~  125 (181)
T PF08659_consen   52 GARVEYVQCDVTDPEAVAAALAQLRQ------RFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN  125 (181)
T ss_dssp             T-EEEEEE--TTSHHHHHHHHHTSHT------TSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCceeeeccCccCHHHHHHHHHHHHh------ccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhc
Confidence            56899999999999999999999988      6789999999999873  566788999999999999999999888755


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                          .+ ...+|..||+.+..                    +.++...|+++...++.+++.....       +..+.+|
T Consensus       126 ----~~-l~~~i~~SSis~~~--------------------G~~gq~~YaaAN~~lda~a~~~~~~-------g~~~~sI  173 (181)
T PF08659_consen  126 ----RP-LDFFILFSSISSLL--------------------GGPGQSAYAAANAFLDALARQRRSR-------GLPAVSI  173 (181)
T ss_dssp             ----TT-TSEEEEEEEHHHHT--------------------T-TTBHHHHHHHHHHHHHHHHHHHT-------TSEEEEE
T ss_pred             ----CC-CCeEEEECChhHhc--------------------cCcchHhHHHHHHHHHHHHHHHHhC-------CCCEEEE
Confidence                22 56889999988743                    5677889999999999999765443       3446666


Q ss_pred             cCCcc
Q 024553          168 DPGVV  172 (266)
Q Consensus       168 ~PG~v  172 (266)
                      +-|..
T Consensus       174 ~wg~W  178 (181)
T PF08659_consen  174 NWGAW  178 (181)
T ss_dssp             EE-EB
T ss_pred             Ecccc
Confidence            66543

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.10  E-value=4.4e-09  Score=90.26  Aligned_cols=183  Identities=11%  Similarity=0.144  Sum_probs=113.2

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .++.++.+|+++.+++.++++             .+|+|||+||.....   ..+...+++++|+.|+..+++.+...  
T Consensus        56 ~~~~~~~~Dl~~~~~~~~~~~-------------~~d~vih~A~~~~~~---~~~~~~~~~~~nv~gt~~ll~~~~~~--  117 (322)
T PLN02986         56 ERLKLFKADLLEESSFEQAIE-------------GCDAVFHTASPVFFT---VKDPQTELIDPALKGTINVLNTCKET--  117 (322)
T ss_pred             CceEEEecCCCCcchHHHHHh-------------CCCEEEEeCCCcCCC---CCCchhhhhHHHHHHHHHHHHHHHhc--
Confidence            368899999999988876662             489999999975321   12234568999999999999887432  


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCC-CC-----ChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEE
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSK-CY-----PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSV  164 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v  164 (266)
                       .+ -++||++||.++............    ...+.. ..     .....|+.+|.+.+.++..+.++      .++.+
T Consensus       118 -~~-v~rvV~~SS~~~~~~~~~~~~~~~----~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~------~~~~~  185 (322)
T PLN02986        118 -PS-VKRVILTSSTAAVLFRQPPIEAND----VVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKD------NGIDM  185 (322)
T ss_pred             -CC-ccEEEEecchhheecCCccCCCCC----CcCcccCCChHHhhccccchHHHHHHHHHHHHHHHHH------hCCeE
Confidence             12 369999999865321000000000    000010 00     12356999999999988877665      37899


Q ss_pred             EEecCCcccCCccCcchh--HHHHHHHHHH-----HHhhcCCCHHHHHHHHHHHhcCCCCcccceee
Q 024553          165 IAADPGVVKTNIMREVPS--FLSLMAFTVL-----KLLGLLQSPEKGINSVLDAALAPPETSGVYFF  224 (266)
Q Consensus       165 ~~v~PG~v~T~~~~~~~~--~~~~~~~~~~-----~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~  224 (266)
                      +.+.|+.+.++.......  ..........     .....+..++|+|++++.++..+ ...|.|..
T Consensus       186 ~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~Dva~a~~~al~~~-~~~~~yni  251 (322)
T PLN02986        186 VVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNRFYRFVDVRDVALAHIKALETP-SANGRYII  251 (322)
T ss_pred             EEEcccceeCCCCCCCCCccHHHHHHHHcCCCCCCCcCcceeEHHHHHHHHHHHhcCc-ccCCcEEE
Confidence            999999999886532110  0001000000     01123568999999999776654 33466544

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.06  E-value=1.8e-08  Score=84.70  Aligned_cols=183  Identities=14%  Similarity=0.099  Sum_probs=120.3

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccc-hhhhhhhhhHHHHHHhhHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYD-QMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~   88 (266)
                      +.+...+.+||++++++.++++             ++|+|+|.|.......    ++.+ +.+...+.|+..+++.+...
T Consensus        56 ~~~l~l~~aDL~d~~sf~~ai~-------------gcdgVfH~Asp~~~~~----~~~e~~li~pav~Gt~nVL~ac~~~  118 (327)
T KOG1502|consen   56 KERLKLFKADLLDEGSFDKAID-------------GCDGVFHTASPVDFDL----EDPEKELIDPAVKGTKNVLEACKKT  118 (327)
T ss_pred             cccceEEeccccccchHHHHHh-------------CCCEEEEeCccCCCCC----CCcHHhhhhHHHHHHHHHHHHHhcc
Confidence            3469999999999999988773             6899999998864211    1134 79999999999999999554


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCC-------hhhcchHhHHHHHHHHHHHHHhhCCCCCCC
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYP-------CARIYEYSKLCLLIFSYELHRNLGLDKSRH  161 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~  161 (266)
                      -    .-.|||++||.++-...-...+....-.     +..+.       ....|..+|.-.+..+-.++.+      .+
T Consensus       119 ~----sVkrvV~TSS~aAv~~~~~~~~~~~vvd-----E~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e------~~  183 (327)
T KOG1502|consen  119 K----SVKRVVYTSSTAAVRYNGPNIGENSVVD-----EESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKE------NG  183 (327)
T ss_pred             C----CcceEEEeccHHHhccCCcCCCCCcccc-----cccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHh------CC
Confidence            2    1369999999887543211122111111     22221       1245888888777777666666      48


Q ss_pred             eEEEEecCCcccCCccCcchhHHHHHH-HHHHH-------HhhcCCCHHHHHHHHHHHhcCCCCcccceeec
Q 024553          162 VSVIAADPGVVKTNIMREVPSFLSLMA-FTVLK-------LLGLLQSPEKGINSVLDAALAPPETSGVYFFG  225 (266)
Q Consensus       162 i~v~~v~PG~v~T~~~~~~~~~~~~~~-~~~~~-------~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~  225 (266)
                      +..++++||.|-.|............. .....       ....+...+++|.+.+.++..+ ...|+|+-.
T Consensus       184 ~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrDVA~AHv~a~E~~-~a~GRyic~  254 (327)
T KOG1502|consen  184 LDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVRDVALAHVLALEKP-SAKGRYICV  254 (327)
T ss_pred             ccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceeeEeHHHHHHHHHHHHcCc-ccCceEEEe
Confidence            899999999999988766322211111 11111       0113579999999999655554 556999863

>PLN02650 dihydroflavonol-4-reductase

Probab=99.06  E-value=4.9e-09  Score=91.06  Aligned_cols=183  Identities=15%  Similarity=0.106  Sum_probs=113.0

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      ++.++.+|+++.+.+.++++             .+|+|||+|+.... .  ..+..++.+++|+.++..+++.+.+... 
T Consensus        57 ~~~~v~~Dl~d~~~~~~~~~-------------~~d~ViH~A~~~~~-~--~~~~~~~~~~~Nv~gt~~ll~aa~~~~~-  119 (351)
T PLN02650         57 RLTLWKADLAVEGSFDDAIR-------------GCTGVFHVATPMDF-E--SKDPENEVIKPTVNGMLSIMKACAKAKT-  119 (351)
T ss_pred             ceEEEEecCCChhhHHHHHh-------------CCCEEEEeCCCCCC-C--CCCchhhhhhHHHHHHHHHHHHHHhcCC-
Confidence            57899999999988776552             47999999986421 1  1233467899999999999999866421 


Q ss_pred             CCCCCeEEEEcCCcccccccc--c-CCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           92 SPVPSRIVNVTSFTHRNVFNA--Q-VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                         ..+||++||.........  . ++.......... .....+...|+.+|.+.+.+++.++++      .+++++.+.
T Consensus       120 ---~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~-~~~~~~~~~Y~~sK~~~E~~~~~~~~~------~gi~~~ilR  189 (351)
T PLN02650        120 ---VRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFC-RRKKMTGWMYFVSKTLAEKAAWKYAAE------NGLDFISII  189 (351)
T ss_pred             ---ceEEEEecchhhcccCCCCCCccCcccCCchhhh-hccccccchHHHHHHHHHHHHHHHHHH------cCCeEEEEC
Confidence               258999999754321110  0 111100000000 001112247999999999999888766      478999999


Q ss_pred             CCcccCCccCcc-hhHH-HHHHHH--HHH-----HhhcCCCHHHHHHHHHHHhcCCCCcccce
Q 024553          169 PGVVKTNIMREV-PSFL-SLMAFT--VLK-----LLGLLQSPEKGINSVLDAALAPPETSGVY  222 (266)
Q Consensus       169 PG~v~T~~~~~~-~~~~-~~~~~~--~~~-----~~~~~~~p~~~a~~~~~~~~~~~~~~G~~  222 (266)
                      |+.+.++..... .+.. ......  ...     ..+.+..++|+|++++.++..+ ...|.|
T Consensus       190 p~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~v~V~Dva~a~~~~l~~~-~~~~~~  251 (351)
T PLN02650        190 PTLVVGPFISTSMPPSLITALSLITGNEAHYSIIKQGQFVHLDDLCNAHIFLFEHP-AAEGRY  251 (351)
T ss_pred             CCceECCCCCCCCCccHHHHHHHhcCCccccCcCCCcceeeHHHHHHHHHHHhcCc-CcCceE
Confidence            999998865331 1111 110000  000     1134679999999999665443 334655

>PLN02214 cinnamoyl-CoA reductase

Probab=99.01  E-value=1.8e-08  Score=87.32  Aligned_cols=177  Identities=18%  Similarity=0.196  Sum_probs=112.5

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      ++.++.+|+++.+++.++++             .+|+|||+||..       .++.++.+++|+.++..+++.+...   
T Consensus        61 ~~~~~~~Dl~d~~~~~~~~~-------------~~d~Vih~A~~~-------~~~~~~~~~~nv~gt~~ll~aa~~~---  117 (342)
T PLN02214         61 RLILCKADLQDYEALKAAID-------------GCDGVFHTASPV-------TDDPEQMVEPAVNGAKFVINAAAEA---  117 (342)
T ss_pred             cEEEEecCcCChHHHHHHHh-------------cCCEEEEecCCC-------CCCHHHHHHHHHHHHHHHHHHHHhc---
Confidence            58889999999988876652             489999999964       2346788999999999999988542   


Q ss_pred             CCCCCeEEEEcCCcc-cccccc----cCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           92 SPVPSRIVNVTSFTH-RNVFNA----QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                       + ..+||++||..+ +.....    .++.+.....    .........|+.+|.+.+.++..++++      .++.++.
T Consensus       118 -~-v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~----~~~~~p~~~Y~~sK~~aE~~~~~~~~~------~g~~~v~  185 (342)
T PLN02214        118 -K-VKRVVITSSIGAVYMDPNRDPEAVVDESCWSDL----DFCKNTKNWYCYGKMVAEQAAWETAKE------KGVDLVV  185 (342)
T ss_pred             -C-CCEEEEeccceeeeccCCCCCCcccCcccCCCh----hhccccccHHHHHHHHHHHHHHHHHHH------cCCcEEE
Confidence             2 459999999653 221110    1111110000    001113457999999999999887666      3789999


Q ss_pred             ecCCcccCCccCcc-hhHH-HHHHHHHH--HH----hhcCCCHHHHHHHHHHHhcCCCCcccceee
Q 024553          167 ADPGVVKTNIMREV-PSFL-SLMAFTVL--KL----LGLLQSPEKGINSVLDAALAPPETSGVYFF  224 (266)
Q Consensus       167 v~PG~v~T~~~~~~-~~~~-~~~~~~~~--~~----~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~  224 (266)
                      +.|+.|..+..... .... ........  ..    ...+...+|+|++++.++..+ ...|.|..
T Consensus       186 lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~V~Dva~a~~~al~~~-~~~g~yn~  250 (342)
T PLN02214        186 LNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEAP-SASGRYLL  250 (342)
T ss_pred             EeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeEHHHHHHHHHHHHhCc-ccCCcEEE
Confidence            99999988754321 1111 11000000  00    113558999999999655443 34577765

>PLN02240 UDP-glucose 4-epimerase

Probab=98.99  E-value=4.9e-08  Score=84.72  Aligned_cols=130  Identities=16%  Similarity=0.072  Sum_probs=89.1

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .++.++.+|+++.+++.+++++           ..+|+|||+||....  ..+.+.+++.+++|+.++..+++.+    +
T Consensus        58 ~~~~~~~~D~~~~~~l~~~~~~-----------~~~d~vih~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~----~  120 (352)
T PLN02240         58 DNLVFHKVDLRDKEALEKVFAS-----------TRFDAVIHFAGLKAV--GESVAKPLLYYDNNLVGTINLLEVM----A  120 (352)
T ss_pred             ccceEEecCcCCHHHHHHHHHh-----------CCCCEEEEccccCCc--cccccCHHHHHHHHHHHHHHHHHHH----H
Confidence            3578999999999998887642           268999999997532  1234567889999999999988865    3


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                      +.+ ..++|++||...+....         +....+..+..+...|+.+|.+.+.+++.++...     .++.+..+-|+
T Consensus       121 ~~~-~~~~v~~Ss~~vyg~~~---------~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~~~~R~~  185 (352)
T PLN02240        121 KHG-CKKLVFSSSATVYGQPE---------EVPCTEEFPLSATNPYGRTKLFIEEICRDIHASD-----PEWKIILLRYF  185 (352)
T ss_pred             HcC-CCEEEEEccHHHhCCCC---------CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-----CCCCEEEEeec
Confidence            333 46899999975442110         1112223344456789999999999998887652     34555555544


Q ss_pred             cc
Q 024553          171 VV  172 (266)
Q Consensus       171 ~v  172 (266)
                      .+
T Consensus       186 ~v  187 (352)
T PLN02240        186 NP  187 (352)
T ss_pred             Cc
Confidence            33

>PLN00198 anthocyanidin reductase; Provisional

Probab=98.98  E-value=1.6e-08  Score=87.37  Aligned_cols=184  Identities=17%  Similarity=0.144  Sum_probs=112.2

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      ++.++.+|+++.+++.+++             ..+|+|||+||....   ...+..+..+++|+.++..+++++.+..  
T Consensus        60 ~~~~~~~Dl~d~~~~~~~~-------------~~~d~vih~A~~~~~---~~~~~~~~~~~~nv~g~~~ll~a~~~~~--  121 (338)
T PLN00198         60 DLKIFGADLTDEESFEAPI-------------AGCDLVFHVATPVNF---ASEDPENDMIKPAIQGVHNVLKACAKAK--  121 (338)
T ss_pred             ceEEEEcCCCChHHHHHHH-------------hcCCEEEEeCCCCcc---CCCChHHHHHHHHHHHHHHHHHHHHhcC--
Confidence            5789999999998877655             247999999996321   1123345678999999999999986531  


Q ss_pred             CCCCCeEEEEcCCccccccc----c-cCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           92 SPVPSRIVNVTSFTHRNVFN----A-QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                       + .++||++||.+.+....    . .++.+........ ....++...|+.||.+.+.+++.++++      .++.++.
T Consensus       122 -~-~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~-~~~~~p~~~Y~~sK~~~E~~~~~~~~~------~~~~~~~  192 (338)
T PLN00198        122 -S-VKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFL-TSEKPPTWGYPASKTLAEKAAWKFAEE------NNIDLIT  192 (338)
T ss_pred             -C-ccEEEEeecceeeeccCCCCCCceeccccCCchhhh-hhcCCccchhHHHHHHHHHHHHHHHHh------cCceEEE
Confidence             2 46999999987654211    0 0111100000000 011234567999999999999887766      3678899


Q ss_pred             ecCCcccCCccCc-chhHHHHHHH-H---HH-------HH----hhcCCCHHHHHHHHHHHhcCCCCccccee
Q 024553          167 ADPGVVKTNIMRE-VPSFLSLMAF-T---VL-------KL----LGLLQSPEKGINSVLDAALAPPETSGVYF  223 (266)
Q Consensus       167 v~PG~v~T~~~~~-~~~~~~~~~~-~---~~-------~~----~~~~~~p~~~a~~~~~~~~~~~~~~G~~~  223 (266)
                      +.|+.|.++.... .+........ .   ..       .+    ...+..++|++++++.++.. +...|.|+
T Consensus       193 ~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~-~~~~~~~~  264 (338)
T PLN00198        193 VIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVEDVCRAHIFLAEK-ESASGRYI  264 (338)
T ss_pred             EeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcceeEHHHHHHHHHHHhhC-cCcCCcEE
Confidence            9999998875321 1111100000 0   00       00    02457899999999865444 33345663

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=98.98  E-value=8.5e-08  Score=82.07  Aligned_cols=133  Identities=14%  Similarity=0.062  Sum_probs=93.5

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      .+.++.+|+++.+++.++++.           ..+|++|||||......  +.+...+.+.+|+.++..+++.+.    +
T Consensus        48 ~~~~~~~D~~~~~~~~~~~~~-----------~~~d~vv~~ag~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~----~  110 (328)
T TIGR01179        48 RVTFVEGDLRDRELLDRLFEE-----------HKIDAVIHFAGLIAVGE--SVQDPLKYYRNNVVNTLNLLEAMQ----Q  110 (328)
T ss_pred             ceEEEECCCCCHHHHHHHHHh-----------CCCcEEEECccccCcch--hhcCchhhhhhhHHHHHHHHHHHH----h
Confidence            467889999999998877641           46999999999763221  334566789999999999988753    3


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCc
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV  171 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~  171 (266)
                      .+ ..++|++||...+.......         ..+..+..+...|+.+|.+.+.+++.++++     ..++.++.+.|+.
T Consensus       111 ~~-~~~~v~~ss~~~~g~~~~~~---------~~e~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~~~~~~~ilR~~~  175 (328)
T TIGR01179       111 TG-VKKFIFSSSAAVYGEPSSIP---------ISEDSPLGPINPYGRSKLMSERILRDLSKA-----DPGLSYVILRYFN  175 (328)
T ss_pred             cC-CCEEEEecchhhcCCCCCCC---------ccccCCCCCCCchHHHHHHHHHHHHHHHHh-----ccCCCEEEEecCc
Confidence            23 46899999876543111000         111223334567999999999999988766     2578888899988


Q ss_pred             ccCCc
Q 024553          172 VKTNI  176 (266)
Q Consensus       172 v~T~~  176 (266)
                      +..+.
T Consensus       176 v~g~~  180 (328)
T TIGR01179       176 VAGAD  180 (328)
T ss_pred             ccCCC
Confidence            87654

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=98.98  E-value=2e-08  Score=87.15  Aligned_cols=187  Identities=11%  Similarity=-0.012  Sum_probs=118.0

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      ++.++.+|+.+.+.+..+++             .+|+|||.|+......  ..++....+++|+.|+..+++.+..    
T Consensus        70 ~~~~~~~Di~d~~~l~~~~~-------------~~d~ViHlAa~~~~~~--~~~~~~~~~~~Nv~gt~nll~~~~~----  130 (348)
T PRK15181         70 RFIFIQGDIRKFTDCQKACK-------------NVDYVLHQAALGSVPR--SLKDPIATNSANIDGFLNMLTAARD----  130 (348)
T ss_pred             ceEEEEccCCCHHHHHHHhh-------------CCCEEEECccccCchh--hhhCHHHHHHHHHHHHHHHHHHHHH----
Confidence            57899999999877765552             4799999999753221  2233457899999999999988743    


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCc
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV  171 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~  171 (266)
                      .+ -.++|++||...+.......         ..+.....+...|+.+|.+.+.+++.++.+      .++.+..+.|+.
T Consensus       131 ~~-~~~~v~~SS~~vyg~~~~~~---------~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~------~~~~~~~lR~~~  194 (348)
T PRK15181        131 AH-VSSFTYAASSSTYGDHPDLP---------KIEERIGRPLSPYAVTKYVNELYADVFARS------YEFNAIGLRYFN  194 (348)
T ss_pred             cC-CCeEEEeechHhhCCCCCCC---------CCCCCCCCCCChhhHHHHHHHHHHHHHHHH------hCCCEEEEEecc
Confidence            23 45999999986654211110         011112233457999999999998877655      478889999999


Q ss_pred             ccCCccCcc------hhH-HHHHHH-HHHHHh------hcCCCHHHHHHHHHHHhcCCC-CcccceeecCCCccccC
Q 024553          172 VKTNIMREV------PSF-LSLMAF-TVLKLL------GLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRTVNS  233 (266)
Q Consensus       172 v~T~~~~~~------~~~-~~~~~~-~~~~~~------~~~~~p~~~a~~~~~~~~~~~-~~~G~~~~~~~g~~~~~  233 (266)
                      +..+.....      .+. ...... ......      +.+...+|+|++++.++..+. ...|..|+.+.|+.+.+
T Consensus       195 vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~yni~~g~~~s~  271 (348)
T PRK15181        195 VFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDRTSL  271 (348)
T ss_pred             eeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcccccCCCCEEEecCCCcEeH
Confidence            987753211      111 111000 000011      234689999999985554332 23566677677776654

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=98.96  E-value=4.1e-08  Score=85.42  Aligned_cols=186  Identities=15%  Similarity=0.132  Sum_probs=111.8

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccc-----hhhhhhhhhHHHHHHhh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYD-----QMMSTNYIGAFFLTKLL   85 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~-----~~~~~n~~~~~~l~~~~   85 (266)
                      .++.++.+|+++.+++.+++             ..+|+|||+||........+.++.+     .++++|+.++..+++.+
T Consensus        58 ~~~~~~~~Dl~~~~~~~~~~-------------~~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~  124 (353)
T PLN02896         58 DRLRLFRADLQEEGSFDEAV-------------KGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSC  124 (353)
T ss_pred             CeEEEEECCCCCHHHHHHHH-------------cCCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHH
Confidence            46889999999998877665             2479999999986432211222233     45566778999999988


Q ss_pred             HHHHhcCCCCCeEEEEcCCcccccccc------cCCccccccCcccC-CCCCChhhcchHhHHHHHHHHHHHHHhhCCCC
Q 024553           86 LPLLKNSPVPSRIVNVTSFTHRNVFNA------QVNNETITGKFFLR-SKCYPCARIYEYSKLCLLIFSYELHRNLGLDK  158 (266)
Q Consensus        86 ~~~l~~~~~~~~iv~vsS~~~~~~~~~------~~~~~~~~~~~~~~-~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~  158 (266)
                      .+..   . .+++|++||...+...+.      .++.+ ... .... ....+....|+.||.+.+.++..+++.     
T Consensus       125 ~~~~---~-~~~~v~~SS~~vyg~~~~~~~~~~~~~E~-~~~-p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----  193 (353)
T PLN02896        125 LKSK---T-VKRVVFTSSISTLTAKDSNGRWRAVVDET-CQT-PIDHVWNTKASGWVYVLSKLLTEEAAFKYAKE-----  193 (353)
T ss_pred             HhcC---C-ccEEEEEechhhccccccCCCCCCccCcc-cCC-cHHHhhccCCCCccHHHHHHHHHHHHHHHHHH-----
Confidence            6542   1 369999999876643211      01110 000 0000 001122347999999999999887766     


Q ss_pred             CCCeEEEEecCCcccCCccCc-chhHHHHHHHHH---HHH------------hhcCCCHHHHHHHHHHHhcCCCCcccce
Q 024553          159 SRHVSVIAADPGVVKTNIMRE-VPSFLSLMAFTV---LKL------------LGLLQSPEKGINSVLDAALAPPETSGVY  222 (266)
Q Consensus       159 ~~~i~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~---~~~------------~~~~~~p~~~a~~~~~~~~~~~~~~G~~  222 (266)
                       .++.++.+.|+.|.++.... .+..........   ...            .+.+..++|+|++++.++..+ ...|.|
T Consensus       194 -~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~~-~~~~~~  271 (353)
T PLN02896        194 -NGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRMGSIALVHIEDICDAHIFLMEQT-KAEGRY  271 (353)
T ss_pred             -cCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccccccCceeEEeHHHHHHHHHHHHhCC-CcCccE
Confidence             37899999999998875432 221111111000   000            013568999999999766443 334555

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=98.94  E-value=1.6e-07  Score=81.14  Aligned_cols=190  Identities=12%  Similarity=0.009  Sum_probs=112.2

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .++.++.+|+++.+++.++++           ..++|+|||+||......  ..+...+.+++|+.++..+++.+    +
T Consensus        50 ~~~~~~~~Dl~d~~~~~~~~~-----------~~~~d~vvh~a~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~----~  112 (338)
T PRK10675         50 KHPTFVEGDIRNEALLTEILH-----------DHAIDTVIHFAGLKAVGE--SVQKPLEYYDNNVNGTLRLISAM----R  112 (338)
T ss_pred             CCceEEEccCCCHHHHHHHHh-----------cCCCCEEEECCccccccc--hhhCHHHHHHHHHHHHHHHHHHH----H
Confidence            356788999999988877663           136999999999753211  22345678999999999988765    3


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCC-ChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCY-PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      +.+ .+++|++||...+......         ...+..+. .+...|+.+|.+.+.+++.++++.     .++++..+.|
T Consensus       113 ~~~-~~~~v~~Ss~~~yg~~~~~---------~~~E~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~~ilR~  177 (338)
T PRK10675        113 AAN-VKNLIFSSSATVYGDQPKI---------PYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQ-----PDWSIALLRY  177 (338)
T ss_pred             HcC-CCEEEEeccHHhhCCCCCC---------ccccccCCCCCCChhHHHHHHHHHHHHHHHHhc-----CCCcEEEEEe
Confidence            333 4689999997654311100         01111121 235689999999999999987663     3455555555


Q ss_pred             CcccCCcc--------CcchhH-HHHHHHHHHH------------------HhhcCCCHHHHHHHHHHHhcCC-CCcccc
Q 024553          170 GVVKTNIM--------REVPSF-LSLMAFTVLK------------------LLGLLQSPEKGINSVLDAALAP-PETSGV  221 (266)
Q Consensus       170 G~v~T~~~--------~~~~~~-~~~~~~~~~~------------------~~~~~~~p~~~a~~~~~~~~~~-~~~~G~  221 (266)
                      +.+.++..        ...+.. ..........                  ....+...+|+|++++.++... ....|.
T Consensus       178 ~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~  257 (338)
T PRK10675        178 FNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVAAMEKLANKPGVH  257 (338)
T ss_pred             eeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHHHHHHHHHHHHHhhhccCCCc
Confidence            44433210        000111 1111111100                  0113568999999998665432 223345


Q ss_pred             eeecCCCcccc
Q 024553          222 YFFGGKGRTVN  232 (266)
Q Consensus       222 ~~~~~~g~~~~  232 (266)
                      .|+.++++.+.
T Consensus       258 ~~ni~~~~~~s  268 (338)
T PRK10675        258 IYNLGAGVGSS  268 (338)
T ss_pred             eEEecCCCcee
Confidence            66666666554

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=98.93  E-value=5.3e-08  Score=83.47  Aligned_cols=181  Identities=13%  Similarity=0.123  Sum_probs=111.8

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .++.++.+|+++.+++..++             ..+|+|||+||......   .+..++++++|+.++..+++.+.... 
T Consensus        55 ~~~~~~~~Dl~~~~~~~~~~-------------~~~d~Vih~A~~~~~~~---~~~~~~~~~~nv~gt~~ll~a~~~~~-  117 (322)
T PLN02662         55 ERLHLFKANLLEEGSFDSVV-------------DGCEGVFHTASPFYHDV---TDPQAELIDPAVKGTLNVLRSCAKVP-  117 (322)
T ss_pred             CceEEEeccccCcchHHHHH-------------cCCCEEEEeCCcccCCC---CChHHHHHHHHHHHHHHHHHHHHhCC-
Confidence            36789999999998876665             24799999999753211   12225789999999999999886431 


Q ss_pred             cCCCCCeEEEEcCCcc--cccccccCCccccccCcccCCCCC-C-----hhhcchHhHHHHHHHHHHHHHhhCCCCCCCe
Q 024553           91 NSPVPSRIVNVTSFTH--RNVFNAQVNNETITGKFFLRSKCY-P-----CARIYEYSKLCLLIFSYELHRNLGLDKSRHV  162 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i  162 (266)
                        + ..+||++||.++  +...+  .....    ...+..+. +     ....|+.+|.+.+.+++.++++      .++
T Consensus       118 --~-~~~~v~~SS~~~~~y~~~~--~~~~~----~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~------~~~  182 (322)
T PLN02662        118 --S-VKRVVVTSSMAAVAYNGKP--LTPDV----VVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKE------NGI  182 (322)
T ss_pred             --C-CCEEEEccCHHHhcCCCcC--CCCCC----cCCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHH------cCC
Confidence              2 359999999753  21110  00000    00111111 1     1247999999999988877655      478


Q ss_pred             EEEEecCCcccCCccCcchh-HHHHHHHHHH--H----HhhcCCCHHHHHHHHHHHhcCCCCcccceee
Q 024553          163 SVIAADPGVVKTNIMREVPS-FLSLMAFTVL--K----LLGLLQSPEKGINSVLDAALAPPETSGVYFF  224 (266)
Q Consensus       163 ~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~--~----~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~  224 (266)
                      .++.+.|+.+.++....... ..........  .    ....+..++|+|++++.++..+ ...|.|..
T Consensus       183 ~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~-~~~~~~~~  250 (322)
T PLN02662        183 DMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNASYRWVDVRDVANAHIQAFEIP-SASGRYCL  250 (322)
T ss_pred             cEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccCCCCCcCeEEHHHHHHHHHHHhcCc-CcCCcEEE
Confidence            89999999999886432110 0011100000  0    1123568999999999665543 34566665

>PLN02572 UDP-sulfoquinovose synthase

Probab=98.88  E-value=2.7e-08  Score=88.97  Aligned_cols=145  Identities=12%  Similarity=0.042  Sum_probs=97.4

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCC-CCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT-SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      ++.++.+|+++.+.+.++++++           ++|+|||+|+.... ....+.+.++..+++|+.|++++++.+...  
T Consensus       114 ~v~~v~~Dl~d~~~v~~~l~~~-----------~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~--  180 (442)
T PLN02572        114 EIELYVGDICDFEFLSEAFKSF-----------EPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEF--  180 (442)
T ss_pred             cceEEECCCCCHHHHHHHHHhC-----------CCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHh--
Confidence            5889999999999988877532           58999999976432 223344556788899999999999988553  


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCcccccc-Ccc-cCC--CCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITG-KFF-LRS--KCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~-~~~-~~~--~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                        +...++|++||...+......+....+.- ... .+.  .+..+...|+.+|.+.+.+++.+++.      .++.++.
T Consensus       181 --gv~~~~V~~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~------~gl~~v~  252 (442)
T PLN02572        181 --APDCHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA------WGIRATD  252 (442)
T ss_pred             --CCCccEEEEecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHh------cCCCEEE
Confidence              21248999999876643211111110000 000 000  12233567999999999999877665      4788898


Q ss_pred             ecCCcccCCcc
Q 024553          167 ADPGVVKTNIM  177 (266)
Q Consensus       167 v~PG~v~T~~~  177 (266)
                      +.|+.+..+..
T Consensus       253 lR~~~vyGp~~  263 (442)
T PLN02572        253 LNQGVVYGVRT  263 (442)
T ss_pred             EecccccCCCC
Confidence            99998877753

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=98.86  E-value=2.1e-07  Score=79.76  Aligned_cols=182  Identities=15%  Similarity=0.050  Sum_probs=113.9

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      .+.++.+|+++.+++.+++             ..+|++||+|+....    ..+..+..+++|+.++..+++.+..    
T Consensus        44 ~~~~~~~D~~~~~~l~~~~-------------~~~d~vi~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----  102 (328)
T TIGR03466        44 DVEIVEGDLRDPASLRKAV-------------AGCRALFHVAADYRL----WAPDPEEMYAANVEGTRNLLRAALE----  102 (328)
T ss_pred             CceEEEeeCCCHHHHHHHH-------------hCCCEEEEeceeccc----CCCCHHHHHHHHHHHHHHHHHHHHH----
Confidence            5789999999998876655             257999999986421    2345678999999999999888753    


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCC---ChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCY---PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      .+ .+++|++||...+......        ....+..+.   .....|+.+|.+.+.+++.++.+      .++.+..+.
T Consensus       103 ~~-~~~~v~~SS~~~~~~~~~~--------~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~------~~~~~~ilR  167 (328)
T TIGR03466       103 AG-VERVVYTSSVATLGVRGDG--------TPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAE------KGLPVVIVN  167 (328)
T ss_pred             hC-CCeEEEEechhhcCcCCCC--------CCcCccCCCCcccccChHHHHHHHHHHHHHHHHHh------cCCCEEEEe
Confidence            22 4699999998765421110        001111111   12347999999999999887655      367888899


Q ss_pred             CCcccCCccCcchhHHHHHHHHHH---HHh----hcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          169 PGVVKTNIMREVPSFLSLMAFTVL---KLL----GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~~~~~---~~~----~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      |+.+.++.................   ...    ..+...+++|++++.++..  ...|.+|..+ |+.+.
T Consensus       168 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~--~~~~~~~~~~-~~~~s  235 (328)
T TIGR03466       168 PSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHLLALER--GRIGERYILG-GENLT  235 (328)
T ss_pred             CCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEEHHHHHHHHHHHHhC--CCCCceEEec-CCCcC
Confidence            998876643321111111110000   000    1245799999999866544  3356666643 45443

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.86  E-value=1.1e-07  Score=84.72  Aligned_cols=184  Identities=14%  Similarity=0.137  Sum_probs=136.4

Q ss_pred             hhcccCCCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC-CCCCcCCCcccchhhhhhhhhHHHH
Q 024553            3 DITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL-ATSSRLTPEGYDQMMSTNYIGAFFL   81 (266)
Q Consensus         3 ~i~~~~~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~-~~~~~~~~~~~~~~~~~n~~~~~~l   81 (266)
                      ++...++..++.++-+|+.|.+.+..+++           .-++|+++|.|+.- -|..+   ....+-+.+|++|+.++
T Consensus       294 el~~~~~~~~~~~~igdVrD~~~~~~~~~-----------~~kvd~VfHAAA~KHVPl~E---~nP~Eai~tNV~GT~nv  359 (588)
T COG1086         294 ELREKFPELKLRFYIGDVRDRDRVERAME-----------GHKVDIVFHAAALKHVPLVE---YNPEEAIKTNVLGTENV  359 (588)
T ss_pred             HHHhhCCCcceEEEecccccHHHHHHHHh-----------cCCCceEEEhhhhccCcchh---cCHHHHHHHhhHhHHHH
Confidence            56667777899999999999999988884           34699999999874 24333   34578999999999999


Q ss_pred             HHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCC
Q 024553           82 TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRH  161 (266)
Q Consensus        82 ~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~  161 (266)
                      ++++...-     -.++|.+|+-                       +.-.+...|+++|...+.++.+++.+..   ..+
T Consensus       360 ~~aa~~~~-----V~~~V~iSTD-----------------------KAV~PtNvmGaTKr~aE~~~~a~~~~~~---~~~  408 (588)
T COG1086         360 AEAAIKNG-----VKKFVLISTD-----------------------KAVNPTNVMGATKRLAEKLFQAANRNVS---GTG  408 (588)
T ss_pred             HHHHHHhC-----CCEEEEEecC-----------------------cccCCchHhhHHHHHHHHHHHHHhhccC---CCC
Confidence            99996543     4589999983                       3444567899999999999999988765   447


Q ss_pred             eEEEEecCCcccCCccCcchhHHHHHHHH-HHH-----HhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCccccC
Q 024553          162 VSVIAADPGVVKTNIMREVPSFLSLMAFT-VLK-----LLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNS  233 (266)
Q Consensus       162 i~v~~v~PG~v~T~~~~~~~~~~~~~~~~-~~~-----~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~~  233 (266)
                      -++..|.=|-|-..-.+-.|-..+..... +..     ..+++.|..|.++-++++...  ..+|..|.-+-|+++..
T Consensus       409 T~f~~VRFGNVlGSrGSViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~LVlqA~a~--~~gGeifvldMGepvkI  484 (588)
T COG1086         409 TRFCVVRFGNVLGSRGSVIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQLVLQAGAI--AKGGEIFVLDMGEPVKI  484 (588)
T ss_pred             cEEEEEEecceecCCCCCHHHHHHHHHcCCCccccCCCceeEEEEHHHHHHHHHHHHhh--cCCCcEEEEcCCCCeEH
Confidence            88998888888665555554443332221 111     234678999999999977654  45677777688888864

>TIGR01746 Thioester-redct thioester reductase domain

Probab=98.80  E-value=1.1e-06  Score=76.30  Aligned_cols=192  Identities=15%  Similarity=0.130  Sum_probs=110.7

Q ss_pred             ccEEEEEecCCCHHH--HHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQS--VLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~--v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.+|++++.-  -.....++.         ..+|++|||||.....     ..+++.+.+|+.++..+++.+.. 
T Consensus        61 ~~v~~~~~D~~~~~~gl~~~~~~~~~---------~~~d~vih~a~~~~~~-----~~~~~~~~~nv~g~~~ll~~a~~-  125 (367)
T TIGR01746        61 ERIEVVAGDLSEPRLGLSDAEWERLA---------ENVDTIVHNGALVNWV-----YPYSELRAANVLGTREVLRLAAS-  125 (367)
T ss_pred             CCEEEEeCCcCcccCCcCHHHHHHHH---------hhCCEEEeCCcEeccC-----CcHHHHhhhhhHHHHHHHHHHhh-
Confidence            468999999987531  011112222         3689999999976421     23577888999999998887743 


Q ss_pred             HhcCCCCCeEEEEcCCccccccccc-CCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQ-VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                         .+ ..+++++||.......... ...+...     ..........|+.+|.+.+.+++.++       ..++.++.+
T Consensus       126 ---~~-~~~~v~iSS~~v~~~~~~~~~~~~~~~-----~~~~~~~~~~Y~~sK~~~E~~~~~~~-------~~g~~~~i~  189 (367)
T TIGR01746       126 ---GR-AKPLHYVSTISVLAAIDLSTVTEDDAI-----VTPPPGLAGGYAQSKWVAELLVREAS-------DRGLPVTIV  189 (367)
T ss_pred             ---CC-CceEEEEccccccCCcCCCCccccccc-----cccccccCCChHHHHHHHHHHHHHHH-------hcCCCEEEE
Confidence               22 3469999998765321110 0000000     00111224579999999998876532       247899999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHH--HH----------hhcCCCHHHHHHHHHHHhcCCCC-cccceeecCCCccccC
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVL--KL----------LGLLQSPEKGINSVLDAALAPPE-TSGVYFFGGKGRTVNS  233 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~--~~----------~~~~~~p~~~a~~~~~~~~~~~~-~~G~~~~~~~g~~~~~  233 (266)
                      .||.+.++..........+......  ..          ...+.++++++++++.++..+.. ..|..|...+++.+.+
T Consensus       190 Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~  268 (367)
T TIGR01746       190 RPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDSPELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVSL  268 (367)
T ss_pred             CCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCCCccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCCH
Confidence            9999987522211111111110000  00          01156789999999976554432 2366666565554443

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=98.80  E-value=4.7e-07  Score=77.22  Aligned_cols=183  Identities=14%  Similarity=0.021  Sum_probs=109.0

Q ss_pred             EEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCC
Q 024553           15 AFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPV   94 (266)
Q Consensus        15 ~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~   94 (266)
                      .+..|+++.+.++.+.+.         ....+|+|||+||...    .+.++.+..+++|+.++..+++.+..    .  
T Consensus        45 ~~~~d~~~~~~~~~~~~~---------~~~~~D~vvh~A~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~----~--  105 (314)
T TIGR02197        45 VIADYIDKEDFLDRLEKG---------AFGKIEAIFHQGACSD----TTETDGEYMMENNYQYSKRLLDWCAE----K--  105 (314)
T ss_pred             eeeccCcchhHHHHHHhh---------ccCCCCEEEECccccC----ccccchHHHHHHHHHHHHHHHHHHHH----h--
Confidence            456777776666554432         1257999999999743    12345678899999999999988753    2  


Q ss_pred             CCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcccC
Q 024553           95 PSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKT  174 (266)
Q Consensus        95 ~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~T  174 (266)
                      +.++|++||...+......+..+         .....+...|+.+|.+.+.+++.+..+.    ..++.+..+.|+.+..
T Consensus       106 ~~~~v~~SS~~vy~~~~~~~~e~---------~~~~~p~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~~~lR~~~vyG  172 (314)
T TIGR02197       106 GIPFIYASSAATYGDGEAGFREG---------RELERPLNVYGYSKFLFDQYVRRRVLPE----ALSAQVVGLRYFNVYG  172 (314)
T ss_pred             CCcEEEEccHHhcCCCCCCcccc---------cCcCCCCCHHHHHHHHHHHHHHHHhHhh----ccCCceEEEEEeeccC
Confidence            24899999977554221111111         1112235579999999999997644332    3466778888888876


Q ss_pred             CccCc---chhHH-HHHHHHH----HHH------------hhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          175 NIMRE---VPSFL-SLMAFTV----LKL------------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       175 ~~~~~---~~~~~-~~~~~~~----~~~------------~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      +....   ..... .+.....    ...            ...+...+|++++++.++..  . .+..|+..+++.+.
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~~--~-~~~~yni~~~~~~s  247 (314)
T TIGR02197       173 PREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLLEN--G-VSGIFNLGTGRARS  247 (314)
T ss_pred             CCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHHhc--c-cCceEEcCCCCCcc
Confidence            54321   11111 1110000    000            01356799999999966554  2 34456656665554

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=98.78  E-value=1.3e-07  Score=77.15  Aligned_cols=179  Identities=16%  Similarity=0.094  Sum_probs=118.7

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      ++.++.+|+.+.+++.++++..           .+|++||+||...  ...+.+.....+..|+.+...+++.+...   
T Consensus        43 ~~~~~~~dl~~~~~~~~~~~~~-----------~~d~vi~~a~~~~--~~~~~~~~~~~~~~n~~~~~~ll~~~~~~---  106 (236)
T PF01370_consen   43 NVEFVIGDLTDKEQLEKLLEKA-----------NIDVVIHLAAFSS--NPESFEDPEEIIEANVQGTRNLLEAAREA---  106 (236)
T ss_dssp             TEEEEESETTSHHHHHHHHHHH-----------TESEEEEEBSSSS--HHHHHHSHHHHHHHHHHHHHHHHHHHHHH---
T ss_pred             eEEEEEeecccccccccccccc-----------CceEEEEeecccc--ccccccccccccccccccccccccccccc---
Confidence            6889999999999999888654           5899999999853  22223567788889998888888877543   


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCc
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV  171 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~  171 (266)
                       + ..++|++||...+....         +....+.....+...|+.+|...+.+++.+.+..      ++++..+.|+.
T Consensus       107 -~-~~~~i~~sS~~~y~~~~---------~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~~~------~~~~~~~R~~~  169 (236)
T PF01370_consen  107 -G-VKRFIFLSSASVYGDPD---------GEPIDEDSPINPLSPYGASKRAAEELLRDYAKKY------GLRVTILRPPN  169 (236)
T ss_dssp             -T-TSEEEEEEEGGGGTSSS---------SSSBETTSGCCHSSHHHHHHHHHHHHHHHHHHHH------TSEEEEEEESE
T ss_pred             -c-ccccccccccccccccc---------cccccccccccccccccccccccccccccccccc------ccccccccccc
Confidence             2 35999999976544320         1111223344556679999999999999887773      78999999999


Q ss_pred             ccCCccC--cchhHHHHHHHHHHH--Hh---------hcCCCHHHHHHHHHHHhcCCCCcccceee
Q 024553          172 VKTNIMR--EVPSFLSLMAFTVLK--LL---------GLLQSPEKGINSVLDAALAPPETSGVYFF  224 (266)
Q Consensus       172 v~T~~~~--~~~~~~~~~~~~~~~--~~---------~~~~~p~~~a~~~~~~~~~~~~~~G~~~~  224 (266)
                      +..+...  ...............  ++         ..+...+|+|++++.++..+. ..|..|+
T Consensus       170 vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~~~~yN  234 (236)
T PF01370_consen  170 VYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPK-AAGGIYN  234 (236)
T ss_dssp             EESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSC-TTTEEEE
T ss_pred             cccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCC-CCCCEEE
Confidence            9887711  111111111111110  01         123578999999997776665 3344443

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN02427 UDP-apiose/xylose synthase

Probab=98.77  E-value=7.4e-07  Score=78.49  Aligned_cols=194  Identities=14%  Similarity=0.101  Sum_probs=113.3

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      ++.++.+|+++.+.+.++++             .+|+|||+|+...+...  .++-.+.+..|+.++..+++.+..    
T Consensus        66 ~~~~~~~Dl~d~~~l~~~~~-------------~~d~ViHlAa~~~~~~~--~~~~~~~~~~n~~gt~~ll~aa~~----  126 (386)
T PLN02427         66 RIQFHRINIKHDSRLEGLIK-------------MADLTINLAAICTPADY--NTRPLDTIYSNFIDALPVVKYCSE----  126 (386)
T ss_pred             CeEEEEcCCCChHHHHHHhh-------------cCCEEEEcccccChhhh--hhChHHHHHHHHHHHHHHHHHHHh----
Confidence            58899999999888766552             47999999997543211  112235567899999988887632    


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccc--c-Cc---ccCC-CC------CChhhcchHhHHHHHHHHHHHHHhhCCCC
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETIT--G-KF---FLRS-KC------YPCARIYEYSKLCLLIFSYELHRNLGLDK  158 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~--~-~~---~~~~-~~------~~~~~~Y~~sK~~~~~~~~~la~~~~~~~  158 (266)
                      .  ..++|++||...+.........++..  . ..   ..+. .+      ......|+.+|.+.+.++..+++.     
T Consensus       127 ~--~~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----  199 (386)
T PLN02427        127 N--NKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE-----  199 (386)
T ss_pred             c--CCEEEEEeeeeeeCCCcCCCCCcccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh-----
Confidence            2  25899999987654321111111000  0 00   0000 00      012346999999999999766544     


Q ss_pred             CCCeEEEEecCCcccCCccCcc----------hhHHHHHHHHHH--HH---------hhcCCCHHHHHHHHHHHhcCCCC
Q 024553          159 SRHVSVIAADPGVVKTNIMREV----------PSFLSLMAFTVL--KL---------LGLLQSPEKGINSVLDAALAPPE  217 (266)
Q Consensus       159 ~~~i~v~~v~PG~v~T~~~~~~----------~~~~~~~~~~~~--~~---------~~~~~~p~~~a~~~~~~~~~~~~  217 (266)
                       .++.+..+.|+.|..+.....          +...........  .+         ...+...+|+|++++.++..+..
T Consensus       200 -~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~  278 (386)
T PLN02427        200 -NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPAR  278 (386)
T ss_pred             -cCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCccc
Confidence             478899999999987753210          111100100000  01         01356899999999866544333


Q ss_pred             cccceeecCCC-cccc
Q 024553          218 TSGVYFFGGKG-RTVN  232 (266)
Q Consensus       218 ~~G~~~~~~~g-~~~~  232 (266)
                      ..|..|+.+++ +.+.
T Consensus       279 ~~g~~yni~~~~~~~s  294 (386)
T PLN02427        279 ANGHIFNVGNPNNEVT  294 (386)
T ss_pred             ccCceEEeCCCCCCcc
Confidence            45666775554 3444

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=98.77  E-value=1.4e-08  Score=84.47  Aligned_cols=176  Identities=14%  Similarity=0.111  Sum_probs=108.6

Q ss_pred             EEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCC
Q 024553           14 EAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP   93 (266)
Q Consensus        14 ~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~   93 (266)
                      .++.+|+.|.+.+..+++           ..++|+|+|.|+.-.-  .+-.+...+.+.+|+.|+.++++.+..+    +
T Consensus        57 ~~vigDvrd~~~l~~~~~-----------~~~pdiVfHaAA~KhV--pl~E~~p~eav~tNv~GT~nv~~aa~~~----~  119 (293)
T PF02719_consen   57 VPVIGDVRDKERLNRIFE-----------EYKPDIVFHAAALKHV--PLMEDNPFEAVKTNVLGTQNVAEAAIEH----G  119 (293)
T ss_dssp             E--CTSCCHHHHHHHHTT-------------T-SEEEE------H--HHHCCCHHHHHHHHCHHHHHHHHHHHHT----T
T ss_pred             CceeecccCHHHHHHHHh-----------hcCCCEEEEChhcCCC--ChHHhCHHHHHHHHHHHHHHHHHHHHHc----C
Confidence            456889999999988874           2479999999987421  1123456889999999999999999764    2


Q ss_pred             CCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCccc
Q 024553           94 VPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVK  173 (266)
Q Consensus        94 ~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~  173 (266)
                       -.++|++|+--                       ...+...|++||...+.++.+++....   ..+.++.+|-=|-|-
T Consensus       120 -v~~~v~ISTDK-----------------------Av~PtnvmGatKrlaE~l~~~~~~~~~---~~~t~f~~VRFGNVl  172 (293)
T PF02719_consen  120 -VERFVFISTDK-----------------------AVNPTNVMGATKRLAEKLVQAANQYSG---NSDTKFSSVRFGNVL  172 (293)
T ss_dssp             --SEEEEEEECG-----------------------CSS--SHHHHHHHHHHHHHHHHCCTSS---SS--EEEEEEE-EET
T ss_pred             -CCEEEEccccc-----------------------cCCCCcHHHHHHHHHHHHHHHHhhhCC---CCCcEEEEEEeccee
Confidence             45999999843                       344567899999999999999888875   567888888888775


Q ss_pred             CCccCcchhHHHHHHHH-HH-----HHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCccccCCc
Q 024553          174 TNIMREVPSFLSLMAFT-VL-----KLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSA  235 (266)
Q Consensus       174 T~~~~~~~~~~~~~~~~-~~-----~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~~~~  235 (266)
                      ..-.+-.+-........ +.     ...+++.+++|.++.++.+....  .+|..|.-+-|+++...+
T Consensus       173 gS~GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~~~~--~~geifvl~mg~~v~I~d  238 (293)
T PF02719_consen  173 GSRGSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQAAALA--KGGEIFVLDMGEPVKILD  238 (293)
T ss_dssp             TGTTSCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHHHHH----TTEEEEE---TCEECCC
T ss_pred             cCCCcHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHHHhhC--CCCcEEEecCCCCcCHHH
Confidence            44433333332222211 10     12245779999999998776543  345566657788887544

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=98.76  E-value=5.6e-07  Score=74.53  Aligned_cols=160  Identities=14%  Similarity=0.039  Sum_probs=105.9

Q ss_pred             EecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCCCC
Q 024553           17 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPS   96 (266)
Q Consensus        17 ~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~   96 (266)
                      .+|+++.+.+.+++.+.           ++|+|||+|++..-  +..+.+-+..+.+|..|+.++.+.+...      +.
T Consensus        33 ~~Ditd~~~v~~~i~~~-----------~PDvVIn~AAyt~v--D~aE~~~e~A~~vNa~~~~~lA~aa~~~------ga   93 (281)
T COG1091          33 ELDITDPDAVLEVIRET-----------RPDVVINAAAYTAV--DKAESEPELAFAVNATGAENLARAAAEV------GA   93 (281)
T ss_pred             cccccChHHHHHHHHhh-----------CCCEEEECcccccc--ccccCCHHHHHHhHHHHHHHHHHHHHHh------CC
Confidence            36999999999988655           68999999998642  2234446899999999999999988443      58


Q ss_pred             eEEEEcCCccccccc-ccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcccCC
Q 024553           97 RIVNVTSFTHRNVFN-AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN  175 (266)
Q Consensus        97 ~iv~vsS~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~T~  175 (266)
                      ++|++|+-..+.... ..+..          .....+...|+.||.+.+..++...          -+...+...|+...
T Consensus        94 ~lVhiSTDyVFDG~~~~~Y~E----------~D~~~P~nvYG~sKl~GE~~v~~~~----------~~~~I~Rtswv~g~  153 (281)
T COG1091          94 RLVHISTDYVFDGEKGGPYKE----------TDTPNPLNVYGRSKLAGEEAVRAAG----------PRHLILRTSWVYGE  153 (281)
T ss_pred             eEEEeecceEecCCCCCCCCC----------CCCCCChhhhhHHHHHHHHHHHHhC----------CCEEEEEeeeeecC
Confidence            999999977654433 12332          3345556789999999999986432          23444556667666


Q ss_pred             ccCcchhHHHHHHHHH------HHHhhcCCCHHHHHHHHHHHhcCC
Q 024553          176 IMREVPSFLSLMAFTV------LKLLGLLQSPEKGINSVLDAALAP  215 (266)
Q Consensus       176 ~~~~~~~~~~~~~~~~------~~~~~~~~~p~~~a~~~~~~~~~~  215 (266)
                      ..+++......+....      ...++......++|+.+..++...
T Consensus       154 ~g~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~  199 (281)
T COG1091         154 YGNNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKE  199 (281)
T ss_pred             CCCCHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhcc
Confidence            5555432221111100      012234568899999999655443

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=98.72  E-value=8.3e-07  Score=83.71  Aligned_cols=190  Identities=11%  Similarity=0.017  Sum_probs=114.7

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .++.++.+|+++.+.+..++.           ...+|+|||+|+......  ..+...+.+++|+.++..+++.+..   
T Consensus        57 ~~v~~~~~Dl~d~~~~~~~~~-----------~~~~D~ViHlAa~~~~~~--~~~~~~~~~~~Nv~gt~~ll~a~~~---  120 (668)
T PLN02260         57 PNFKFVKGDIASADLVNYLLI-----------TEGIDTIMHFAAQTHVDN--SFGNSFEFTKNNIYGTHVLLEACKV---  120 (668)
T ss_pred             CCeEEEECCCCChHHHHHHHh-----------hcCCCEEEECCCccCchh--hhhCHHHHHHHHHHHHHHHHHHHHh---
Confidence            368899999999887765431           246899999999864221  1223457889999999999887743   


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                       .+...++|++||...+.......    ..+  ..+..+..+...|+.+|.+.+.+++.+++++      ++.+..+.|+
T Consensus       121 -~~~vkr~I~~SS~~vyg~~~~~~----~~~--~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~~------~l~~vilR~~  187 (668)
T PLN02260        121 -TGQIRRFIHVSTDEVYGETDEDA----DVG--NHEASQLLPTNPYSATKAGAEMLVMAYGRSY------GLPVITTRGN  187 (668)
T ss_pred             -cCCCcEEEEEcchHHhCCCcccc----ccC--ccccCCCCCCCCcHHHHHHHHHHHHHHHHHc------CCCEEEECcc
Confidence             22136999999977654221110    000  0111222344679999999999998876653      6778889999


Q ss_pred             cccCCccCcchhHHHHHHHHHH--HH---------hhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          171 VVKTNIMREVPSFLSLMAFTVL--KL---------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       171 ~v~T~~~~~~~~~~~~~~~~~~--~~---------~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      .|..+..... ...........  .+         ...+...+|+|++++.++.. . ..|..|+.+.++...
T Consensus       188 ~VyGp~~~~~-~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~-~-~~~~vyni~~~~~~s  257 (668)
T PLN02260        188 NVYGPNQFPE-KLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHK-G-EVGHVYNIGTKKERR  257 (668)
T ss_pred             cccCcCCCcc-cHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhc-C-CCCCEEEECCCCeeE
Confidence            8877643211 01111111000  00         11245799999999855432 2 234455545555443

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=98.72  E-value=1.1e-06  Score=74.93  Aligned_cols=185  Identities=14%  Similarity=0.052  Sum_probs=108.1

Q ss_pred             EEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCCC
Q 024553           16 FQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVP   95 (266)
Q Consensus        16 i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~   95 (266)
                      +.+|+.+..+...+++++...    ...+++|+|||+||..... .  . +-+..+++|+.++..+++.+..    .+  
T Consensus        43 ~~~~~~d~~~~~~~~~~~~~~----~~~~~~d~Vih~A~~~~~~-~--~-~~~~~~~~n~~~t~~ll~~~~~----~~--  108 (308)
T PRK11150         43 VDLDIADYMDKEDFLAQIMAG----DDFGDIEAIFHEGACSSTT-E--W-DGKYMMDNNYQYSKELLHYCLE----RE--  108 (308)
T ss_pred             hhhhhhhhhhHHHHHHHHhcc----cccCCccEEEECceecCCc-C--C-ChHHHHHHHHHHHHHHHHHHHH----cC--
Confidence            445666665555555544320    0234799999999864321 1  1 2245789999999998888743    22  


Q ss_pred             CeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcccCC
Q 024553           96 SRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN  175 (266)
Q Consensus        96 ~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~T~  175 (266)
                      .++|++||...+.......         ..+.....+...|+.+|.+.+.+++.++.+      .++.+..+.|+.+..+
T Consensus       109 ~~~i~~SS~~vyg~~~~~~---------~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~------~~~~~~~lR~~~vyG~  173 (308)
T PRK11150        109 IPFLYASSAATYGGRTDDF---------IEEREYEKPLNVYGYSKFLFDEYVRQILPE------ANSQICGFRYFNVYGP  173 (308)
T ss_pred             CcEEEEcchHHhCcCCCCC---------CccCCCCCCCCHHHHHHHHHHHHHHHHHHH------cCCCEEEEeeeeecCC
Confidence            4799999987654221100         111223334467999999999988777554      3678888888888776


Q ss_pred             ccCc---chhHHHHHHHHHHH-----H-------hhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          176 IMRE---VPSFLSLMAFTVLK-----L-------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       176 ~~~~---~~~~~~~~~~~~~~-----~-------~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      ....   ..............     .       .+.+...+|++++++.++..  ..+| .|+.+.|+.+.
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~--~~~~-~yni~~~~~~s  242 (308)
T PRK11150        174 REGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWEN--GVSG-IFNCGTGRAES  242 (308)
T ss_pred             CCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhc--CCCC-eEEcCCCCcee
Confidence            4322   11111111000100     0       11245899999998855432  2234 66666666554

>PLN02686 cinnamoyl-CoA reductase

Probab=98.69  E-value=1.1e-06  Score=76.98  Aligned_cols=189  Identities=12%  Similarity=0.030  Sum_probs=110.3

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      .+.++.+|+++.+++.++++             .+|.++|.|+...+....  ........+|+.++..+++.+...   
T Consensus       108 ~~~~v~~Dl~d~~~l~~~i~-------------~~d~V~hlA~~~~~~~~~--~~~~~~~~~nv~gt~~llea~~~~---  169 (367)
T PLN02686        108 GIWTVMANLTEPESLHEAFD-------------GCAGVFHTSAFVDPAGLS--GYTKSMAELEAKASENVIEACVRT---  169 (367)
T ss_pred             ceEEEEcCCCCHHHHHHHHH-------------hccEEEecCeeecccccc--cccchhhhhhHHHHHHHHHHHHhc---
Confidence            57889999999998877663             367889998875322211  112355678999998888887432   


Q ss_pred             CCCCCeEEEEcCCcc--cccc-c----ccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEE
Q 024553           92 SPVPSRIVNVTSFTH--RNVF-N----AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSV  164 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~--~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v  164 (266)
                      .+ -.++|++||..+  +... .    ..++......    +.....+...|+.+|.+.+.+++.++++      .++++
T Consensus       170 ~~-v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~----~~~~~~p~~~Y~~sK~~~E~~~~~~~~~------~gl~~  238 (367)
T PLN02686        170 ES-VRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSD----ESFCRDNKLWYALGKLKAEKAAWRAARG------KGLKL  238 (367)
T ss_pred             CC-ccEEEEeccHHHhcccccCCCCCCcccCCCCCCC----hhhcccccchHHHHHHHHHHHHHHHHHh------cCceE
Confidence            12 358999999642  1100 0    0011110000    0011223356999999999999877665      47999


Q ss_pred             EEecCCcccCCccCcchhH-HHHHHHHHHHHhh----cCCCHHHHHHHHHHHhcCC-C-CcccceeecCCCccc
Q 024553          165 IAADPGVVKTNIMREVPSF-LSLMAFTVLKLLG----LLQSPEKGINSVLDAALAP-P-ETSGVYFFGGKGRTV  231 (266)
Q Consensus       165 ~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~----~~~~p~~~a~~~~~~~~~~-~-~~~G~~~~~~~g~~~  231 (266)
                      +.+.|+.|.++......+. ...........++    .+...++++++++.++..+ + ...|.| . +.|+.+
T Consensus       239 v~lRp~~vyGp~~~~~~~~~~~~~~~g~~~~~g~g~~~~v~V~Dva~A~~~al~~~~~~~~~~~y-i-~~g~~~  310 (367)
T PLN02686        239 ATICPALVTGPGFFRRNSTATIAYLKGAQEMLADGLLATADVERLAEAHVCVYEAMGNKTAFGRY-I-CFDHVV  310 (367)
T ss_pred             EEEcCCceECCCCCCCCChhHHHHhcCCCccCCCCCcCeEEHHHHHHHHHHHHhccCCCCCCCcE-E-EeCCCc
Confidence            9999999999864321111 1000000001111    2568999999998666532 2 233445 3 344444

>PRK06720 hypothetical protein; Provisional

Probab=98.66  E-value=2.4e-07  Score=71.89  Aligned_cols=88  Identities=13%  Similarity=0.042  Sum_probs=68.4

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCC---CCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT---SSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      ..+.++.+|+++.+++.++++++.+      .++++|++|||||+...   ..+.+.++ +.  .+|+.+.+..++.+.+
T Consensus        65 ~~~~~~~~Dl~~~~~v~~~v~~~~~------~~G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~  135 (169)
T PRK06720         65 GEALFVSYDMEKQGDWQRVISITLN------AFSRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTS  135 (169)
T ss_pred             CcEEEEEccCCCHHHHHHHHHHHHH------HcCCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHH
Confidence            4577899999999999999999988      67899999999998642   22223233 33  7788888889999999


Q ss_pred             HHhcCC------CCCeEEEEcCCccc
Q 024553           88 LLKNSP------VPSRIVNVTSFTHR  107 (266)
Q Consensus        88 ~l~~~~------~~~~iv~vsS~~~~  107 (266)
                      .|.+++      +.||+..|||.++.
T Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (169)
T PRK06720        136 SFMKQQEEVVLSDLPIFGIIGTKGQS  161 (169)
T ss_pred             HHHhcCCEEEeecCceeeEecccccc
Confidence            987653      36899999987753

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=98.58  E-value=1.4e-06  Score=72.10  Aligned_cols=159  Identities=13%  Similarity=0.071  Sum_probs=91.6

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      .+.++.+|+++..  ..+.+.+.         ..+|+||+|+|...+..      ....+.+|+.+...+++.+.    +
T Consensus        63 ~~~~~~~Dl~d~~--~~l~~~~~---------~~~d~vi~~~g~~~~~~------~~~~~~~n~~~~~~ll~a~~----~  121 (251)
T PLN00141         63 SLQIVRADVTEGS--DKLVEAIG---------DDSDAVICATGFRRSFD------PFAPWKVDNFGTVNLVEACR----K  121 (251)
T ss_pred             ceEEEEeeCCCCH--HHHHHHhh---------cCCCEEEECCCCCcCCC------CCCceeeehHHHHHHHHHHH----H
Confidence            5889999999831  12222221         26899999998742211      12345788888888888863    3


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHH-HHHHHHHh-hCCCCCCCeEEEEecC
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLI-FSYELHRN-LGLDKSRHVSVIAADP  169 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~-~~~~la~~-~~~~~~~~i~v~~v~P  169 (266)
                      .+ .++||++||...+...                 .+.+....|...|..... ..+..+.+ +.   ..+++++.+.|
T Consensus       122 ~~-~~~iV~iSS~~v~g~~-----------------~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~---~~gi~~~iirp  180 (251)
T PLN00141        122 AG-VTRFILVSSILVNGAA-----------------MGQILNPAYIFLNLFGLTLVAKLQAEKYIR---KSGINYTIVRP  180 (251)
T ss_pred             cC-CCEEEEEccccccCCC-----------------cccccCcchhHHHHHHHHHHHHHHHHHHHH---hcCCcEEEEEC
Confidence            33 5799999998643210                 011112234444433222 22333333 23   56899999999


Q ss_pred             CcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCC
Q 024553          170 GVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPE  217 (266)
Q Consensus       170 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~  217 (266)
                      |++.++...........     ........+++++|+.++.++..++.
T Consensus       181 g~~~~~~~~~~~~~~~~-----~~~~~~~i~~~dvA~~~~~~~~~~~~  223 (251)
T PLN00141        181 GGLTNDPPTGNIVMEPE-----DTLYEGSISRDQVAEVAVEALLCPES  223 (251)
T ss_pred             CCccCCCCCceEEECCC-----CccccCcccHHHHHHHHHHHhcChhh
Confidence            99987643221100000     00011245999999999988776654

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=98.56  E-value=1.5e-06  Score=73.79  Aligned_cols=188  Identities=11%  Similarity=-0.015  Sum_probs=109.9

Q ss_pred             EEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCC
Q 024553           15 AFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPV   94 (266)
Q Consensus        15 ~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~   94 (266)
                      ...+|+++.+++.++++.           ..+|+|||+|+....... ..+..++.+++|+.++..+++.+...    + 
T Consensus        30 ~~~~Dl~~~~~l~~~~~~-----------~~~d~Vih~A~~~~~~~~-~~~~~~~~~~~n~~~~~~ll~~~~~~----~-   92 (306)
T PLN02725         30 HKELDLTRQADVEAFFAK-----------EKPTYVILAAAKVGGIHA-NMTYPADFIRENLQIQTNVIDAAYRH----G-   92 (306)
T ss_pred             cccCCCCCHHHHHHHHhc-----------cCCCEEEEeeeeecccch-hhhCcHHHHHHHhHHHHHHHHHHHHc----C-
Confidence            346899998888776642           357999999997532111 12234567899999999888888542    2 


Q ss_pred             CCeEEEEcCCcccccccc-cCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCccc
Q 024553           95 PSRIVNVTSFTHRNVFNA-QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVK  173 (266)
Q Consensus        95 ~~~iv~vsS~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~  173 (266)
                      -.++|++||...+..... .++.++...     ....+....|+.+|.+.+.+++.+.+.      .++++..+.|+.+.
T Consensus        93 ~~~~i~~SS~~vyg~~~~~~~~E~~~~~-----~~~~p~~~~Y~~sK~~~e~~~~~~~~~------~~~~~~~~R~~~vy  161 (306)
T PLN02725         93 VKKLLFLGSSCIYPKFAPQPIPETALLT-----GPPEPTNEWYAIAKIAGIKMCQAYRIQ------YGWDAISGMPTNLY  161 (306)
T ss_pred             CCeEEEeCceeecCCCCCCCCCHHHhcc-----CCCCCCcchHHHHHHHHHHHHHHHHHH------hCCCEEEEEeccee
Confidence            458999999765432111 111111000     011122235999999999988877655      36788999999987


Q ss_pred             CCccCc------chhH-HHHHHHHHH------------HHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          174 TNIMRE------VPSF-LSLMAFTVL------------KLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       174 T~~~~~------~~~~-~~~~~~~~~------------~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      .+....      ..+. .........            .....+..++|++++++.++... ...+.| +.+.+..+.
T Consensus       162 G~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~~~-~~~~~~-ni~~~~~~s  237 (306)
T PLN02725        162 GPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMRRY-SGAEHV-NVGSGDEVT  237 (306)
T ss_pred             CCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHHhcc-ccCcce-EeCCCCccc
Confidence            775321      1111 100000000            00123568999999998665432 233444 544555443

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=98.56  E-value=2e-06  Score=64.53  Aligned_cols=143  Identities=13%  Similarity=-0.021  Sum_probs=103.1

Q ss_pred             EEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcC---CCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           13 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        13 ~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      -+.+..|-+-.++-+.+.+++.+.+    ...++|.++|-||.+......   -...-+-++.-.++....-.+....++
T Consensus        44 sI~V~~~~swtEQe~~v~~~vg~sL----~gekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HL  119 (236)
T KOG4022|consen   44 SILVDGNKSWTEQEQSVLEQVGSSL----QGEKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHL  119 (236)
T ss_pred             eEEecCCcchhHHHHHHHHHHHHhh----cccccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhcc
Confidence            4556667777777788888887755    456899999999987322211   123346677777777777777777777


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      +.   +|-+-..+.-++                    -.+.|++..|+++|++++.++++|+.+-.. .+.+-.+..|.|
T Consensus       120 K~---GGLL~LtGAkaA--------------------l~gTPgMIGYGMAKaAVHqLt~SLaak~SG-lP~gsaa~~ilP  175 (236)
T KOG4022|consen  120 KP---GGLLQLTGAKAA--------------------LGGTPGMIGYGMAKAAVHQLTSSLAAKDSG-LPDGSAALTILP  175 (236)
T ss_pred             CC---Cceeeecccccc--------------------cCCCCcccchhHHHHHHHHHHHHhcccccC-CCCCceeEEEee
Confidence            65   445444444443                    237788999999999999999999887321 277889999999


Q ss_pred             CcccCCccCcchhH
Q 024553          170 GVVKTNIMREVPSF  183 (266)
Q Consensus       170 G~v~T~~~~~~~~~  183 (266)
                      =..+|||.+...+.
T Consensus       176 VTLDTPMNRKwMP~  189 (236)
T KOG4022|consen  176 VTLDTPMNRKWMPN  189 (236)
T ss_pred             eeccCccccccCCC
Confidence            99999999875443

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=98.53  E-value=5.3e-06  Score=71.99  Aligned_cols=187  Identities=9%  Similarity=0.070  Sum_probs=109.1

Q ss_pred             ccEEEEEecCC-CHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           11 ARLEAFQVDLS-SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        11 ~~~~~i~~Dls-~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      ..+.++.+|+. +.+.+.+++             ..+|+|||+|+...+..  ..++-+..+++|+.++..+++.+..  
T Consensus        46 ~~~~~~~~Dl~~~~~~~~~~~-------------~~~d~ViH~aa~~~~~~--~~~~p~~~~~~n~~~~~~ll~aa~~--  108 (347)
T PRK11908         46 PRMHFFEGDITINKEWIEYHV-------------KKCDVILPLVAIATPAT--YVKQPLRVFELDFEANLPIVRSAVK--  108 (347)
T ss_pred             CCeEEEeCCCCCCHHHHHHHH-------------cCCCEEEECcccCChHH--hhcCcHHHHHHHHHHHHHHHHHHHh--
Confidence            35889999998 555544433             25899999999753321  2234467889999999988887743  


Q ss_pred             hcCCCCCeEEEEcCCcccccccc-cCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNA-QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                        .+  .++|++||...+..... .++.+.. .  +.......+...|+.+|.+.+.+++.++...      ++.+..+.
T Consensus       109 --~~--~~~v~~SS~~vyg~~~~~~~~ee~~-~--~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~------~~~~~ilR  175 (347)
T PRK11908        109 --YG--KHLVFPSTSEVYGMCPDEEFDPEAS-P--LVYGPINKPRWIYACSKQLMDRVIWAYGMEE------GLNFTLFR  175 (347)
T ss_pred             --cC--CeEEEEecceeeccCCCcCcCcccc-c--cccCcCCCccchHHHHHHHHHHHHHHHHHHc------CCCeEEEe
Confidence              22  59999999876542211 1111110 0  0000001223469999999999998877653      55667777


Q ss_pred             CCcccCCccCcc-------hhHHHHHHHHHH--H---------HhhcCCCHHHHHHHHHHHhcCCCC-cccceeecCC
Q 024553          169 PGVVKTNIMREV-------PSFLSLMAFTVL--K---------LLGLLQSPEKGINSVLDAALAPPE-TSGVYFFGGK  227 (266)
Q Consensus       169 PG~v~T~~~~~~-------~~~~~~~~~~~~--~---------~~~~~~~p~~~a~~~~~~~~~~~~-~~G~~~~~~~  227 (266)
                      |+.+..+.....       ............  .         ..+.+...+|++++++.++..++. ..|..|+.+.
T Consensus       176 ~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~  253 (347)
T PRK11908        176 PFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALMKIIENKDGVASGKIYNIGN  253 (347)
T ss_pred             eeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHHHHHhCccccCCCCeEEeCC
Confidence            877766542210       000001000000  0         112367899999999976655432 4566666544

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=98.51  E-value=7.8e-06  Score=68.84  Aligned_cols=176  Identities=10%  Similarity=0.041  Sum_probs=104.7

Q ss_pred             EecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCCCC
Q 024553           17 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPS   96 (266)
Q Consensus        17 ~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~   96 (266)
                      .+|+.+.++++++++.           ..+|++||+||.....  ......+..+++|+.++..+++.+..    .+  .
T Consensus        33 ~~d~~~~~~~~~~~~~-----------~~~d~vi~~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~   93 (287)
T TIGR01214        33 QLDLTDPEALERLLRA-----------IRPDAVVNTAAYTDVD--GAESDPEKAFAVNALAPQNLARAAAR----HG--A   93 (287)
T ss_pred             ccCCCCHHHHHHHHHh-----------CCCCEEEECCcccccc--ccccCHHHHHHHHHHHHHHHHHHHHH----cC--C
Confidence            4699999888777642           2589999999975321  12234567899999999999888743    22  4


Q ss_pred             eEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcccCCc
Q 024553           97 RIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI  176 (266)
Q Consensus        97 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~T~~  176 (266)
                      ++|++||...+......         ...+.....+...|+.+|...+.+++.+          +..++.+.|+.+..+.
T Consensus        94 ~~v~~Ss~~vy~~~~~~---------~~~E~~~~~~~~~Y~~~K~~~E~~~~~~----------~~~~~ilR~~~v~G~~  154 (287)
T TIGR01214        94 RLVHISTDYVFDGEGKR---------PYREDDATNPLNVYGQSKLAGEQAIRAA----------GPNALIVRTSWLYGGG  154 (287)
T ss_pred             eEEEEeeeeeecCCCCC---------CCCCCCCCCCcchhhHHHHHHHHHHHHh----------CCCeEEEEeeecccCC
Confidence            89999997654321100         0111122233567999999999888643          2357788999887765


Q ss_pred             cCcchhHHHHHHHHHH-HH-------hhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          177 MREVPSFLSLMAFTVL-KL-------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       177 ~~~~~~~~~~~~~~~~-~~-------~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      ..... .......... .+       ...+...++++++++.++...+..+|.|-. .++..+.
T Consensus       155 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~ni-~~~~~~s  216 (287)
T TIGR01214       155 GGRNF-VRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQRLARARGVYHL-ANSGQCS  216 (287)
T ss_pred             CCCCH-HHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHhhccCCCCeEEE-ECCCCcC
Confidence            32111 0011100000 00       112346899999999766544344455533 4444444

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=98.47  E-value=1e-05  Score=66.23  Aligned_cols=207  Identities=13%  Similarity=0.002  Sum_probs=129.3

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      ..+..++..|+.+...+..++           ....+|.|+|.|+.....  .+.-+--+..+.|++++..|+++.....
T Consensus        56 ~p~ykfv~~di~~~~~~~~~~-----------~~~~id~vihfaa~t~vd--~s~~~~~~~~~nnil~t~~Lle~~~~sg  122 (331)
T KOG0747|consen   56 SPNYKFVEGDIADADLVLYLF-----------ETEEIDTVIHFAAQTHVD--RSFGDSFEFTKNNILSTHVLLEAVRVSG  122 (331)
T ss_pred             CCCceEeeccccchHHHHhhh-----------ccCchhhhhhhHhhhhhh--hhcCchHHHhcCCchhhhhHHHHHHhcc
Confidence            447889999999999988877           456899999999976321  1111224667889999999998885543


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                          .-.++|++|+-..++.........        +.....+..+|+++|+|.+++.+++.+.|      ++.++.+.-
T Consensus       123 ----~i~~fvhvSTdeVYGds~~~~~~~--------E~s~~nPtnpyAasKaAaE~~v~Sy~~sy------~lpvv~~R~  184 (331)
T KOG0747|consen  123 ----NIRRFVHVSTDEVYGDSDEDAVVG--------EASLLNPTNPYAASKAAAEMLVRSYGRSY------GLPVVTTRM  184 (331)
T ss_pred             ----CeeEEEEecccceecCcccccccc--------ccccCCCCCchHHHHHHHHHHHHHHhhcc------CCcEEEEec
Confidence                246899999987765432222221        12334456789999999999999998886      455555555


Q ss_pred             CcccCCccCcc--hh-HHHHHHHHHHHH-------hhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCccccCCccccC
Q 024553          170 GVVKTNIMREV--PS-FLSLMAFTVLKL-------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFN  239 (266)
Q Consensus       170 G~v~T~~~~~~--~~-~~~~~~~~~~~~-------~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~~~~~~~~  239 (266)
                      +.|..|-.-..  .+ ...........+       .+.....+++++++..++..  .+.|..|+.+.          .+
T Consensus       185 nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~K--g~~geIYNIgt----------d~  252 (331)
T KOG0747|consen  185 NNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEK--GELGEIYNIGT----------DD  252 (331)
T ss_pred             cCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhc--CCccceeeccC----------cc
Confidence            55555543221  11 101010000001       12245799999999844443  55688887432          23


Q ss_pred             HHHHHHHHHHHHHHhhhccc
Q 024553          240 SKLAGELWTTSCNLFINSQL  259 (266)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~  259 (266)
                      +.....+.+...++++..-+
T Consensus       253 e~~~~~l~k~i~eli~~~~~  272 (331)
T KOG0747|consen  253 EMRVIDLAKDICELFEKRLP  272 (331)
T ss_pred             hhhHHHHHHHHHHHHHHhcc
Confidence            44445566666666665443

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=98.47  E-value=1.1e-06  Score=72.76  Aligned_cols=139  Identities=16%  Similarity=0.141  Sum_probs=74.1

Q ss_pred             CccEEEEEecCCCHHH-H-HHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQS-V-LKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~-v-~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      ..+++++.+|++++.- + ....+++.+         .+|+|||||+...-..     .+++..++|+.|+..+++.+. 
T Consensus        59 ~~ri~~v~GDl~~~~lGL~~~~~~~L~~---------~v~~IiH~Aa~v~~~~-----~~~~~~~~NV~gt~~ll~la~-  123 (249)
T PF07993_consen   59 LSRIEVVEGDLSQPNLGLSDEDYQELAE---------EVDVIIHCAASVNFNA-----PYSELRAVNVDGTRNLLRLAA-  123 (249)
T ss_dssp             TTTEEEEE--TTSGGGG--HHHHHHHHH---------H--EEEE--SS-SBS------S--EEHHHHHHHHHHHHHHHT-
T ss_pred             hccEEEEeccccccccCCChHHhhcccc---------ccceeeecchhhhhcc-----cchhhhhhHHHHHHHHHHHHH-
Confidence            4689999999998641 1 122333333         5899999999864222     366789999999999998885 


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccc--cccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEE
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNET--ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVI  165 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~  165 (266)
                         ..+ ..+++++||...............  ......  .........|..||...+.+++..+.+.      ++.+.
T Consensus       124 ---~~~-~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~gY~~SK~~aE~~l~~a~~~~------g~p~~  191 (249)
T PF07993_consen  124 ---QGK-RKRFHYISTAYVAGSRPGTIEEKVYPEEEDDL--DPPQGFPNGYEQSKWVAERLLREAAQRH------GLPVT  191 (249)
T ss_dssp             ---SSS----EEEEEEGGGTTS-TTT--SSS-HHH--EE--E--TTSEE-HHHHHHHHHHHHHHHHHHH---------EE
T ss_pred             ---hcc-CcceEEeccccccCCCCCcccccccccccccc--hhhccCCccHHHHHHHHHHHHHHHHhcC------CceEE
Confidence               222 349999999332221111111100  000000  1223334589999999999998877663      66789


Q ss_pred             EecCCcccCC
Q 024553          166 AADPGVVKTN  175 (266)
Q Consensus       166 ~v~PG~v~T~  175 (266)
                      .+.||.|-++
T Consensus       192 I~Rp~~i~g~  201 (249)
T PF07993_consen  192 IYRPGIIVGD  201 (249)
T ss_dssp             EEEE-EEE-S
T ss_pred             EEecCccccc
Confidence            9999998663

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=98.46  E-value=2.1e-05  Score=68.99  Aligned_cols=187  Identities=12%  Similarity=0.017  Sum_probs=110.4

Q ss_pred             EEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcC
Q 024553           13 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS   92 (266)
Q Consensus        13 ~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~   92 (266)
                      +.++.+|+++.+.+..++             ..+|+|||+|+...+.. ......+..+..|+.++..+++.+..    .
T Consensus        66 ~~~~~~Dl~d~~~~~~~~-------------~~~D~Vih~Aa~~~~~~-~~~~~~~~~~~~N~~~t~nll~aa~~----~  127 (370)
T PLN02695         66 HEFHLVDLRVMENCLKVT-------------KGVDHVFNLAADMGGMG-FIQSNHSVIMYNNTMISFNMLEAARI----N  127 (370)
T ss_pred             ceEEECCCCCHHHHHHHH-------------hCCCEEEEcccccCCcc-ccccCchhhHHHHHHHHHHHHHHHHH----h
Confidence            467889999887765544             24799999998653211 11223355678899999988887743    2


Q ss_pred             CCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcc
Q 024553           93 PVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVV  172 (266)
Q Consensus        93 ~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v  172 (266)
                      + -.++|++||...+......  .++. +..+.+..+..+...|+.+|.+.+.+++.++..      .++.+..+.|+.+
T Consensus       128 ~-vk~~V~~SS~~vYg~~~~~--~~~~-~~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~------~g~~~~ilR~~~v  197 (370)
T PLN02695        128 G-VKRFFYASSACIYPEFKQL--ETNV-SLKESDAWPAEPQDAYGLEKLATEELCKHYTKD------FGIECRIGRFHNI  197 (370)
T ss_pred             C-CCEEEEeCchhhcCCcccc--CcCC-CcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHH------hCCCEEEEEECCc
Confidence            2 4599999997655421110  0000 000111113344568999999999999887665      4678888999998


Q ss_pred             cCCccCc------chhHHHHHHHHHH--HH---------hhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          173 KTNIMRE------VPSFLSLMAFTVL--KL---------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       173 ~T~~~~~------~~~~~~~~~~~~~--~~---------~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      ..+....      .+..  +......  .+         ...+...+|+++.++.++.. + . +..|+.+.++.+.
T Consensus       198 yGp~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~~-~-~-~~~~nv~~~~~~s  269 (370)
T PLN02695        198 YGPFGTWKGGREKAPAA--FCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLTKS-D-F-REPVNIGSDEMVS  269 (370)
T ss_pred             cCCCCCccccccccHHH--HHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHHhc-c-C-CCceEecCCCcee
Confidence            8774321      1111  1110000  01         11246899999999865433 2 2 3345555555554

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=98.42  E-value=2.4e-05  Score=73.75  Aligned_cols=188  Identities=9%  Similarity=0.063  Sum_probs=111.9

Q ss_pred             cEEEEEecCCCHHH-HHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           12 RLEAFQVDLSSFQS-VLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        12 ~~~~i~~Dls~~~~-v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .+.++.+|+++... +++++             ..+|+|||+||...+..  ..+..++.+++|+.++..+++++...  
T Consensus       361 ~~~~~~gDl~d~~~~l~~~l-------------~~~D~ViHlAa~~~~~~--~~~~~~~~~~~Nv~~t~~ll~a~~~~--  423 (660)
T PRK08125        361 RFHFVEGDISIHSEWIEYHI-------------KKCDVVLPLVAIATPIE--YTRNPLRVFELDFEENLKIIRYCVKY--  423 (660)
T ss_pred             ceEEEeccccCcHHHHHHHh-------------cCCCEEEECccccCchh--hccCHHHHHHhhHHHHHHHHHHHHhc--
Confidence            58889999998655 22222             25899999999865322  12234578899999999999887542  


Q ss_pred             cCCCCCeEEEEcCCcccccccc-cCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNA-QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                          +.++|++||...+..... .++.+....   .......+...|+.+|.+.+.+++.+++.      .++.+..+.|
T Consensus       424 ----~~~~V~~SS~~vyg~~~~~~~~E~~~~~---~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~------~g~~~~ilR~  490 (660)
T PRK08125        424 ----NKRIIFPSTSEVYGMCTDKYFDEDTSNL---IVGPINKQRWIYSVSKQLLDRVIWAYGEK------EGLRFTLFRP  490 (660)
T ss_pred             ----CCeEEEEcchhhcCCCCCCCcCcccccc---ccCCCCCCccchHHHHHHHHHHHHHHHHh------cCCceEEEEE
Confidence                258999999775542111 111110000   00000112347999999999999887665      3678888999


Q ss_pred             CcccCCccCcch-------hHHHHHHHHHH--HH---------hhcCCCHHHHHHHHHHHhcCCC-CcccceeecCCCc
Q 024553          170 GVVKTNIMREVP-------SFLSLMAFTVL--KL---------LGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGR  229 (266)
Q Consensus       170 G~v~T~~~~~~~-------~~~~~~~~~~~--~~---------~~~~~~p~~~a~~~~~~~~~~~-~~~G~~~~~~~g~  229 (266)
                      +.+..+......       ...........  .+         .+.+...+|++++++.++..++ ...|..|+.++|+
T Consensus       491 ~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~  569 (660)
T PRK08125        491 FNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPD  569 (660)
T ss_pred             ceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHHHHHHhccccccCCeEEEcCCCC
Confidence            988876532210       00000000000  00         1235689999999986655432 2356667656553

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=98.40  E-value=5.3e-06  Score=70.52  Aligned_cols=122  Identities=11%  Similarity=-0.058  Sum_probs=80.4

Q ss_pred             EecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCCCC
Q 024553           17 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPS   96 (266)
Q Consensus        17 ~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~   96 (266)
                      .+|++|.+.+.+++++           .++|+|||+|+......  ..++-+..+.+|+.++..+++.+..    .  +.
T Consensus        37 ~~Dl~d~~~~~~~~~~-----------~~~D~Vih~Aa~~~~~~--~~~~~~~~~~~N~~~~~~l~~aa~~----~--g~   97 (299)
T PRK09987         37 CGDFSNPEGVAETVRK-----------IRPDVIVNAAAHTAVDK--AESEPEFAQLLNATSVEAIAKAANE----V--GA   97 (299)
T ss_pred             cCCCCCHHHHHHHHHh-----------cCCCEEEECCccCCcch--hhcCHHHHHHHHHHHHHHHHHHHHH----c--CC
Confidence            4699999888777642           25799999999864321  2233466788999999999888743    2  24


Q ss_pred             eEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcccCCc
Q 024553           97 RIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI  176 (266)
Q Consensus        97 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~T~~  176 (266)
                      ++|++||...+.....         ....+..+..+...|+.+|.+.+.+++.+..          ....+.|+++..+.
T Consensus        98 ~~v~~Ss~~Vy~~~~~---------~p~~E~~~~~P~~~Yg~sK~~~E~~~~~~~~----------~~~ilR~~~vyGp~  158 (299)
T PRK09987         98 WVVHYSTDYVFPGTGD---------IPWQETDATAPLNVYGETKLAGEKALQEHCA----------KHLIFRTSWVYAGK  158 (299)
T ss_pred             eEEEEccceEECCCCC---------CCcCCCCCCCCCCHHHHHHHHHHHHHHHhCC----------CEEEEecceecCCC
Confidence            8999999776532211         0111222334456799999999998864321          23666777777654

>PLN02996 fatty acyl-CoA reductase

Probab=98.40  E-value=9.7e-06  Score=73.55  Aligned_cols=188  Identities=13%  Similarity=0.142  Sum_probs=110.4

Q ss_pred             ccEEEEEecCCCH-------HHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHH
Q 024553           11 ARLEAFQVDLSSF-------QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTK   83 (266)
Q Consensus        11 ~~~~~i~~Dls~~-------~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~   83 (266)
                      .++.++.+|++.+       +.++.++    +         .+|+|||+|+....     .+..+..+.+|+.|+..+++
T Consensus        84 ~kv~~i~GDl~~~~LGLs~~~~~~~l~----~---------~vD~ViH~AA~v~~-----~~~~~~~~~~Nv~gt~~ll~  145 (491)
T PLN02996         84 EKVTPVPGDISYDDLGVKDSNLREEMW----K---------EIDIVVNLAATTNF-----DERYDVALGINTLGALNVLN  145 (491)
T ss_pred             cCEEEEecccCCcCCCCChHHHHHHHH----h---------CCCEEEECccccCC-----cCCHHHHHHHHHHHHHHHHH
Confidence            4789999999843       2233332    2         58999999998642     13567899999999999988


Q ss_pred             hhHHHHhcCCCCCeEEEEcCCcccccccccCCccccc------c------------------------Cccc--------
Q 024553           84 LLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT------G------------------------KFFL--------  125 (266)
Q Consensus        84 ~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~------~------------------------~~~~--------  125 (266)
                      .+...-   + -.++|++||...+....+.+......      +                        .+..        
T Consensus       146 ~a~~~~---~-~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (491)
T PLN02996        146 FAKKCV---K-VKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKD  221 (491)
T ss_pred             HHHhcC---C-CCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhh
Confidence            874421   1 35899999987654322111000000      0                        0000        


Q ss_pred             --CCC--CCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcccCCccCcchhHH-------HHHHHHHHH-
Q 024553          126 --RSK--CYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL-------SLMAFTVLK-  193 (266)
Q Consensus       126 --~~~--~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~-------~~~~~~~~~-  193 (266)
                        -.+  .......|+.||++.+.+++.    +.    .++.+..+.|+.|..+.....+...       ......... 
T Consensus       222 ~~~~~~~~~~~pn~Y~~TK~~aE~lv~~----~~----~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~  293 (491)
T PLN02996        222 LGMERAKLHGWPNTYVFTKAMGEMLLGN----FK----ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGK  293 (491)
T ss_pred             hchhHHHhCCCCCchHhhHHHHHHHHHH----hc----CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccce
Confidence              000  111234699999999999854    32    3788999999999776543322110       010000000 


Q ss_pred             H---------hhcCCCHHHHHHHHHHHhcCC--CCcccceeecCCC
Q 024553          194 L---------LGLLQSPEKGINSVLDAALAP--PETSGVYFFGGKG  228 (266)
Q Consensus       194 ~---------~~~~~~p~~~a~~~~~~~~~~--~~~~G~~~~~~~g  228 (266)
                      .         ...+..+++++++++.++...  ....+..|+.+.|
T Consensus       294 ~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~  339 (491)
T PLN02996        294 LTCFLADPNSVLDVIPADMVVNAMIVAMAAHAGGQGSEIIYHVGSS  339 (491)
T ss_pred             EeEEecCCCeecceecccHHHHHHHHHHHHhhccCCCCcEEEecCC
Confidence            0         123468899999998655432  1234667776666

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=98.38  E-value=3.5e-06  Score=69.63  Aligned_cols=116  Identities=10%  Similarity=0.042  Sum_probs=86.8

Q ss_pred             EEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcC
Q 024553           13 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS   92 (266)
Q Consensus        13 ~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~   92 (266)
                      +.++++|+.|.+-+++++++           .++|.|||.||...  -..+.+.-.+.++-|+.|+..|++++...    
T Consensus        46 ~~f~~gDi~D~~~L~~vf~~-----------~~idaViHFAa~~~--VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~----  108 (329)
T COG1087          46 FKFYEGDLLDRALLTAVFEE-----------NKIDAVVHFAASIS--VGESVQNPLKYYDNNVVGTLNLIEAMLQT----  108 (329)
T ss_pred             CceEEeccccHHHHHHHHHh-----------cCCCEEEECccccc--cchhhhCHHHHHhhchHhHHHHHHHHHHh----
Confidence            58999999999999888853           47999999999752  12244455789999999999988887443    


Q ss_pred             CCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhC
Q 024553           93 PVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLG  155 (266)
Q Consensus        93 ~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~  155 (266)
                      + -.++|+-||.+.+..+..         .+..|..+..+..+|+.||.+.+.+.+.+++...
T Consensus       109 g-v~~~vFSStAavYG~p~~---------~PI~E~~~~~p~NPYG~sKlm~E~iL~d~~~a~~  161 (329)
T COG1087         109 G-VKKFIFSSTAAVYGEPTT---------SPISETSPLAPINPYGRSKLMSEEILRDAAKANP  161 (329)
T ss_pred             C-CCEEEEecchhhcCCCCC---------cccCCCCCCCCCCcchhHHHHHHHHHHHHHHhCC
Confidence            3 458888888776653322         1222344555678899999999999999998864

>PRK07201 short chain dehydrogenase; Provisional

Probab=98.37  E-value=2.5e-05  Score=73.54  Aligned_cols=186  Identities=11%  Similarity=0.032  Sum_probs=107.5

Q ss_pred             ccEEEEEecCCCHHHH--HHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSV--LKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v--~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.+|+++.+..  ....+++          ..+|+|||+||.....     ...++...+|+.++..+++.+.  
T Consensus        51 ~~v~~~~~Dl~~~~~~~~~~~~~~l----------~~~D~Vih~Aa~~~~~-----~~~~~~~~~nv~gt~~ll~~a~--  113 (657)
T PRK07201         51 DRVVPLVGDLTEPGLGLSEADIAEL----------GDIDHVVHLAAIYDLT-----ADEEAQRAANVDGTRNVVELAE--  113 (657)
T ss_pred             CcEEEEecccCCccCCcCHHHHHHh----------cCCCEEEECceeecCC-----CCHHHHHHHHhHHHHHHHHHHH--
Confidence            4688899999985320  1111222          3689999999975321     1245678899999988887764  


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                        +.+ ..++|++||...+.......+.+..       .........|+.+|...+.+++.         ..++.+..+.
T Consensus       114 --~~~-~~~~v~~SS~~v~g~~~~~~~e~~~-------~~~~~~~~~Y~~sK~~~E~~~~~---------~~g~~~~ilR  174 (657)
T PRK07201        114 --RLQ-AATFHHVSSIAVAGDYEGVFREDDF-------DEGQGLPTPYHRTKFEAEKLVRE---------ECGLPWRVYR  174 (657)
T ss_pred             --hcC-CCeEEEEeccccccCccCccccccc-------hhhcCCCCchHHHHHHHHHHHHH---------cCCCcEEEEc
Confidence              333 4699999998765322221211111       01122235699999999988742         2478899999


Q ss_pred             CCcccCCccCc----chhHH---HHHHHHHH-H---Hh-------hcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcc
Q 024553          169 PGVVKTNIMRE----VPSFL---SLMAFTVL-K---LL-------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRT  230 (266)
Q Consensus       169 PG~v~T~~~~~----~~~~~---~~~~~~~~-~---~~-------~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~  230 (266)
                      |+.|..+....    .....   ........ .   +.       ..+...++++++++.++. .+...|..|+..+++.
T Consensus       175 p~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~~~-~~~~~g~~~ni~~~~~  253 (657)
T PRK07201        175 PAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADALDHLMH-KDGRDGQTFHLTDPKP  253 (657)
T ss_pred             CCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHHHHHhc-CcCCCCCEEEeCCCCC
Confidence            99997653211    11100   00000000 0   00       023468899999986544 3445576666566665


Q ss_pred             ccC
Q 024553          231 VNS  233 (266)
Q Consensus       231 ~~~  233 (266)
                      +.+
T Consensus       254 ~s~  256 (657)
T PRK07201        254 QRV  256 (657)
T ss_pred             CcH
Confidence            543

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=98.33  E-value=3.1e-05  Score=66.54  Aligned_cols=188  Identities=16%  Similarity=0.044  Sum_probs=119.0

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      ...+.++.+|+.+..++.+.+             .+. .+||+|+..-+  .....+-+..+++|+.|+..++..+..  
T Consensus        54 ~~~v~~~~~D~~~~~~i~~a~-------------~~~-~Vvh~aa~~~~--~~~~~~~~~~~~vNV~gT~nvi~~c~~--  115 (361)
T KOG1430|consen   54 SGRVTVILGDLLDANSISNAF-------------QGA-VVVHCAASPVP--DFVENDRDLAMRVNVNGTLNVIEACKE--  115 (361)
T ss_pred             CCceeEEecchhhhhhhhhhc-------------cCc-eEEEeccccCc--cccccchhhheeecchhHHHHHHHHHH--
Confidence            457889999999998887755             244 56666654322  223336789999999999888888744  


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCCh--hhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPC--ARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                        .+ -.++|++||....+.....++        ..+..+++.  ...|+.||+-.+.+++..+.      .......++
T Consensus       116 --~~-v~~lIYtSs~~Vvf~g~~~~n--------~~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~------~~~l~T~aL  178 (361)
T KOG1430|consen  116 --LG-VKRLIYTSSAYVVFGGEPIIN--------GDESLPYPLKHIDPYGESKALAEKLVLEANG------SDDLYTCAL  178 (361)
T ss_pred             --hC-CCEEEEecCceEEeCCeeccc--------CCCCCCCccccccccchHHHHHHHHHHHhcC------CCCeeEEEE
Confidence              33 569999999876553322111        112233433  36899999999999865432      256788899


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHH--------HhhcCCCHHHHHHHHHHH---hc-CCCCcccceeecCCCcccc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLK--------LLGLLQSPEKGINSVLDA---AL-APPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~--------~~~~~~~p~~~a~~~~~~---~~-~~~~~~G~~~~~~~g~~~~  232 (266)
                      -|-.|..+.-...-+...........        .+-.+...+.++.+.+-+   +. .++..+|++|+..++.++.
T Consensus       179 R~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~~~~~~Gq~yfI~d~~p~~  255 (361)
T KOG1430|consen  179 RPPGIYGPGDKRLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLDKSPSVNGQFYFITDDTPVR  255 (361)
T ss_pred             ccccccCCCCccccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHhcCCccCceEEEEeCCCcch
Confidence            99999888876654433221111100        001122344455444422   23 4567889999988988886

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.33  E-value=2.2e-05  Score=66.76  Aligned_cols=182  Identities=16%  Similarity=0.054  Sum_probs=109.3

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      .+.++.+|+++.+.+..+++          . .. |++||+|+.......... ...+.+.+|+.++..+++++..    
T Consensus        43 ~~~~~~~d~~~~~~~~~~~~----------~-~~-d~vih~aa~~~~~~~~~~-~~~~~~~~nv~gt~~ll~aa~~----  105 (314)
T COG0451          43 GVEFVVLDLTDRDLVDELAK----------G-VP-DAVIHLAAQSSVPDSNAS-DPAEFLDVNVDGTLNLLEAARA----  105 (314)
T ss_pred             ccceeeecccchHHHHHHHh----------c-CC-CEEEEccccCchhhhhhh-CHHHHHHHHHHHHHHHHHHHHH----
Confidence            46788999998855444432          1 12 999999998753332222 4567999999999999999865    


Q ss_pred             CCCCCeEEEEcCCcccccc-cc-cCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           92 SPVPSRIVNVTSFTHRNVF-NA-QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      .+ ..++|+.||....... .. .++.+.         .+..+...|+.+|.+.+.++..++..      .++.+..+.|
T Consensus       106 ~~-~~~~v~~ss~~~~~~~~~~~~~~E~~---------~~~~p~~~Yg~sK~~~E~~~~~~~~~------~~~~~~ilR~  169 (314)
T COG0451         106 AG-VKRFVFASSVSVVYGDPPPLPIDEDL---------GPPRPLNPYGVSKLAAEQLLRAYARL------YGLPVVILRP  169 (314)
T ss_pred             cC-CCeEEEeCCCceECCCCCCCCccccc---------CCCCCCCHHHHHHHHHHHHHHHHHHH------hCCCeEEEee
Confidence            22 5689996665543321 01 111110         12222227999999999999888773      4788888998


Q ss_pred             CcccCCccCcc-hh-HHHH----HHHHHH-HHhh-------cCCCHHHHHHHHHHHhcCCCCcccceeecCCCc
Q 024553          170 GVVKTNIMREV-PS-FLSL----MAFTVL-KLLG-------LLQSPEKGINSVLDAALAPPETSGVYFFGGKGR  229 (266)
Q Consensus       170 G~v~T~~~~~~-~~-~~~~----~~~~~~-~~~~-------~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~  229 (266)
                      +.+..+..... .. ....    ...... ....       .+...++++++++.++..+...   .|+...+.
T Consensus       170 ~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~---~~ni~~~~  240 (314)
T COG0451         170 FNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDGG---VFNIGSGT  240 (314)
T ss_pred             eeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCCCc---EEEeCCCC
Confidence            88876654332 11 1100    110110 1111       1456899999999665554433   55545544

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=98.32  E-value=7.4e-06  Score=72.26  Aligned_cols=159  Identities=11%  Similarity=0.018  Sum_probs=99.8

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      .+.++.+|+++.+++.++++.+.         ..+|+||||+|....       .....+++|+.++..+++.+.    +
T Consensus       112 ~v~~v~~Dl~d~~~l~~~~~~~~---------~~~D~Vi~~aa~~~~-------~~~~~~~vn~~~~~~ll~aa~----~  171 (390)
T PLN02657        112 GAEVVFGDVTDADSLRKVLFSEG---------DPVDVVVSCLASRTG-------GVKDSWKIDYQATKNSLDAGR----E  171 (390)
T ss_pred             CceEEEeeCCCHHHHHHHHHHhC---------CCCcEEEECCccCCC-------CCccchhhHHHHHHHHHHHHH----H
Confidence            57899999999999988876431         268999999985321       123456788888877777763    3


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCc
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV  171 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~  171 (266)
                      .+ -+++|++||....                       .+...|..+|...+...+.    .    ..++....+.|+.
T Consensus       172 ~g-v~r~V~iSS~~v~-----------------------~p~~~~~~sK~~~E~~l~~----~----~~gl~~tIlRp~~  219 (390)
T PLN02657        172 VG-AKHFVLLSAICVQ-----------------------KPLLEFQRAKLKFEAELQA----L----DSDFTYSIVRPTA  219 (390)
T ss_pred             cC-CCEEEEEeecccc-----------------------CcchHHHHHHHHHHHHHHh----c----cCCCCEEEEccHH
Confidence            33 4689999997641                       1234577888888776543    1    4688899999987


Q ss_pred             ccCCccCcchhHHHHHHH-HHHHHhh-------cCCCHHHHHHHHHHHhcCCCCcccceeecCC
Q 024553          172 VKTNIMREVPSFLSLMAF-TVLKLLG-------LLQSPEKGINSVLDAALAPPETSGVYFFGGK  227 (266)
Q Consensus       172 v~T~~~~~~~~~~~~~~~-~~~~~~~-------~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~  227 (266)
                      +..++...    ...... .....++       .+.+.+|+|..++.++..+ ...|+.|..++
T Consensus       220 ~~~~~~~~----~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~-~~~~~~~~Igg  278 (390)
T PLN02657        220 FFKSLGGQ----VEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDE-SKINKVLPIGG  278 (390)
T ss_pred             HhcccHHH----HHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCc-cccCCEEEcCC
Confidence            75432111    000000 0000011       1357889999998766543 33466666543

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=98.29  E-value=6.6e-06  Score=68.85  Aligned_cols=143  Identities=17%  Similarity=0.209  Sum_probs=106.9

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccC-------CC-CCCcceeeEcCCCC---CCCCcCCCcccchhhhhhhhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDS-------DM-HSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGA   78 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~-------~~-~~~ld~lv~nAG~~---~~~~~~~~~~~~~~~~~n~~~~   78 (266)
                      ...+.....|..+..++...+.++...+...       +. .-.+..||......   +|...++.+.|..++++|++.+
T Consensus        49 ~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~  128 (299)
T PF08643_consen   49 RPDIRPLWLDDSDPSSIHASLSRFASLLSRPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTP  128 (299)
T ss_pred             CCCCCCcccCCCCCcchHHHHHHHHHHhcCCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHH
Confidence            4568888889988888888888887765321       00 01456666655543   4566889999999999999999


Q ss_pred             HHHHHhhHHHHhcCC-CCCeEEEEc-CCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCC
Q 024553           79 FFLTKLLLPLLKNSP-VPSRIVNVT-SFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGL  156 (266)
Q Consensus        79 ~~l~~~~~~~l~~~~-~~~~iv~vs-S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~  156 (266)
                      +..++.++|+++.+. .+.+||.+. |+...                    -..+....-.....++..++..|.+|+. 
T Consensus       129 ~~~~q~lLPlL~~~~~~~~~iil~~Psi~ss--------------------l~~PfhspE~~~~~al~~~~~~LrrEl~-  187 (299)
T PF08643_consen  129 ILTIQGLLPLLRSRSNQKSKIILFNPSISSS--------------------LNPPFHSPESIVSSALSSFFTSLRRELR-  187 (299)
T ss_pred             HHHHHHHHHHHHhccCCCceEEEEeCchhhc--------------------cCCCccCHHHHHHHHHHHHHHHHHHHhh-
Confidence            999999999998822 246666555 44432                    2444455567888899999999999997 


Q ss_pred             CCCCCeEEEEecCCcccCC
Q 024553          157 DKSRHVSVIAADPGVVKTN  175 (266)
Q Consensus       157 ~~~~~i~v~~v~PG~v~T~  175 (266)
                        ..+|.|..++-|.++-.
T Consensus       188 --~~~I~V~~i~LG~l~i~  204 (299)
T PF08643_consen  188 --PHNIDVTQIKLGNLDIG  204 (299)
T ss_pred             --hcCCceEEEEeeeeccc
Confidence              78999999999988754

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PLN02206 UDP-glucuronate decarboxylase

Probab=98.23  E-value=0.0001  Score=66.09  Aligned_cols=167  Identities=14%  Similarity=0.039  Sum_probs=96.9

Q ss_pred             CcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcc
Q 024553           45 SIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFF  124 (266)
Q Consensus        45 ~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  124 (266)
                      .+|+|||+|+...+..  ..++.++.+++|+.++..+++.+..    .+  .++|++||...+.........++..+   
T Consensus       183 ~~D~ViHlAa~~~~~~--~~~~p~~~~~~Nv~gt~nLleaa~~----~g--~r~V~~SS~~VYg~~~~~p~~E~~~~---  251 (442)
T PLN02206        183 EVDQIYHLACPASPVH--YKFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEVYGDPLQHPQVETYWG---  251 (442)
T ss_pred             CCCEEEEeeeecchhh--hhcCHHHHHHHHHHHHHHHHHHHHH----hC--CEEEEECChHHhCCCCCCCCCccccc---
Confidence            5899999999754322  1223468899999999999988743    22  48999999876542211111111000   


Q ss_pred             cCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcccCCccCcch-hHH-HHHHHHH----HHH----
Q 024553          125 LRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP-SFL-SLMAFTV----LKL----  194 (266)
Q Consensus       125 ~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~T~~~~~~~-~~~-~~~~~~~----~~~----  194 (266)
                       +..+......|+.+|.+.+.+++.+.+.+      ++.+..+.|+.+..+...... ... .+.....    ...    
T Consensus       252 -~~~P~~~~s~Y~~SK~~aE~~~~~y~~~~------g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G  324 (442)
T PLN02206        252 -NVNPIGVRSCYDEGKRTAETLTMDYHRGA------NVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDG  324 (442)
T ss_pred             -cCCCCCccchHHHHHHHHHHHHHHHHHHh------CCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCC
Confidence             01122334679999999999988776553      567777777777665422100 000 0100000    000    


Q ss_pred             --hhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          195 --LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       195 --~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                        ...+...+|+|++++.++.. + ..| .|+.++++.+.
T Consensus       325 ~~~rdfi~V~Dva~ai~~a~e~-~-~~g-~yNIgs~~~~s  361 (442)
T PLN02206        325 KQTRSFQFVSDLVEGLMRLMEG-E-HVG-PFNLGNPGEFT  361 (442)
T ss_pred             CEEEeEEeHHHHHHHHHHHHhc-C-CCc-eEEEcCCCcee
Confidence              11256799999999865532 2 345 45556666554

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=98.19  E-value=4.3e-05  Score=65.34  Aligned_cols=138  Identities=18%  Similarity=0.153  Sum_probs=89.0

Q ss_pred             CccEEEEEecCCC------HHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHH
Q 024553           10 DARLEAFQVDLSS------FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTK   83 (266)
Q Consensus        10 ~~~~~~i~~Dls~------~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~   83 (266)
                      ..++.++.+|++.      ....++++             ..+|.+||||+...-...     .++....|+.|+..+++
T Consensus        59 ~~ri~vv~gDl~e~~lGL~~~~~~~La-------------~~vD~I~H~gA~Vn~v~p-----Ys~L~~~NVlGT~evlr  120 (382)
T COG3320          59 ADRVEVVAGDLAEPDLGLSERTWQELA-------------ENVDLIIHNAALVNHVFP-----YSELRGANVLGTAEVLR  120 (382)
T ss_pred             cceEEEEecccccccCCCCHHHHHHHh-------------hhcceEEecchhhcccCc-----HHHhcCcchHhHHHHHH
Confidence            5689999999994      33333333             368999999998743222     57889999999999888


Q ss_pred             hhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeE
Q 024553           84 LLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVS  163 (266)
Q Consensus        84 ~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~  163 (266)
                      .+...    . ..-+.+|||++........-...++....-...........|+.||.+.+.+++...       ..|+.
T Consensus       121 La~~g----k-~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~-------~rGLp  188 (382)
T COG3320         121 LAATG----K-PKPLHYVSSISVGETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAG-------DRGLP  188 (382)
T ss_pred             HHhcC----C-CceeEEEeeeeeccccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHh-------hcCCC
Confidence            87332    1 234899999875433211111111110001112233345789999999999886432       34788


Q ss_pred             EEEecCCcccCCcc
Q 024553          164 VIAADPGVVKTNIM  177 (266)
Q Consensus       164 v~~v~PG~v~T~~~  177 (266)
                      +..+-||+|-.+-.
T Consensus       189 v~I~Rpg~I~gds~  202 (382)
T COG3320         189 VTIFRPGYITGDSR  202 (382)
T ss_pred             eEEEecCeeeccCc
Confidence            99999999965544

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=98.06  E-value=3.5e-05  Score=63.25  Aligned_cols=175  Identities=13%  Similarity=0.093  Sum_probs=116.7

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      +.+++.+.+||+|..++.++++++           .+|-++|-|+..  +-..+.+.-+.+.+++.+|+.+++.++.-+-
T Consensus        54 ~~~l~l~~gDLtD~~~l~r~l~~v-----------~PdEIYNLaAQS--~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~  120 (345)
T COG1089          54 DPRLHLHYGDLTDSSNLLRILEEV-----------QPDEIYNLAAQS--HVGVSFEQPEYTADVDAIGTLRLLEAIRILG  120 (345)
T ss_pred             CceeEEEeccccchHHHHHHHHhc-----------Cchhheeccccc--cccccccCcceeeeechhHHHHHHHHHHHhC
Confidence            345999999999999999999776           478888888764  3345666678999999999999998874443


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      .+   ..|+..-||+.-++-.         .-.+-.+..++-+..+|+++|.....++..+...|......||-+|+=+|
T Consensus       121 ~~---~~rfYQAStSE~fG~v---------~~~pq~E~TPFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP  188 (345)
T COG1089         121 EK---KTRFYQASTSELYGLV---------QEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESP  188 (345)
T ss_pred             Cc---ccEEEecccHHhhcCc---------ccCccccCCCCCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCC
Confidence            22   4688888876644311         11122235577778899999999999998888887643456888888888


Q ss_pred             CcccCCccCcchhHHHHHHHHHH--------HHhhcCCCHHHHHHHHH
Q 024553          170 GVVKTNIMREVPSFLSLMAFTVL--------KLLGLLQSPEKGINSVL  209 (266)
Q Consensus       170 G~v~T~~~~~~~~~~~~~~~~~~--------~~~~~~~~p~~~a~~~~  209 (266)
                      .==.|-.++..............        ...+..+...+..++++
T Consensus       189 ~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mw  236 (345)
T COG1089         189 LRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMW  236 (345)
T ss_pred             CCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHH
Confidence            64334344443222211111111        11123457777888776

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=97.93  E-value=7.6e-05  Score=62.48  Aligned_cols=119  Identities=13%  Similarity=0.066  Sum_probs=87.6

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      +..+.++++|++|.+.+++++++.           ++|.|+|-|+...-  ..+.+.....++.|+.|++.++..+..  
T Consensus        53 ~~~v~f~~~Dl~D~~~L~kvF~~~-----------~fd~V~Hfa~~~~v--geS~~~p~~Y~~nNi~gtlnlLe~~~~--  117 (343)
T KOG1371|consen   53 GKSVFFVEGDLNDAEALEKLFSEV-----------KFDAVMHFAALAAV--GESMENPLSYYHNNIAGTLNLLEVMKA--  117 (343)
T ss_pred             CCceEEEEeccCCHHHHHHHHhhc-----------CCceEEeehhhhcc--chhhhCchhheehhhhhHHHHHHHHHH--
Confidence            467999999999999999998654           58999999997531  123334478999999999998887744  


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCC-ChhhcchHhHHHHHHHHHHHHHhhC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCY-PCARIYEYSKLCLLIFSYELHRNLG  155 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~sK~~~~~~~~~la~~~~  155 (266)
                        .+ -..+|+.||...+..+..         ..+.+..+. .+...|+.+|.+++...+.+...+.
T Consensus       118 --~~-~~~~V~sssatvYG~p~~---------ip~te~~~t~~p~~pyg~tK~~iE~i~~d~~~~~~  172 (343)
T KOG1371|consen  118 --HN-VKALVFSSSATVYGLPTK---------VPITEEDPTDQPTNPYGKTKKAIEEIIHDYNKAYG  172 (343)
T ss_pred             --cC-CceEEEecceeeecCcce---------eeccCcCCCCCCCCcchhhhHHHHHHHHhhhcccc
Confidence              33 568999999876553211         112222233 3678899999999999998888763

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=97.92  E-value=0.0011  Score=67.92  Aligned_cols=193  Identities=16%  Similarity=0.081  Sum_probs=106.6

Q ss_pred             cEEEEEecCCCHHHH--HHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           12 RLEAFQVDLSSFQSV--LKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v--~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      ++.++.+|++++.--  ....+++.         ..+|++||||+.....     ..++.....|+.|+..+++.+..  
T Consensus      1035 ~i~~~~gDl~~~~lgl~~~~~~~l~---------~~~d~iiH~Aa~~~~~-----~~~~~~~~~nv~gt~~ll~~a~~-- 1098 (1389)
T TIGR03443      1035 RIEVVLGDLSKEKFGLSDEKWSDLT---------NEVDVIIHNGALVHWV-----YPYSKLRDANVIGTINVLNLCAE-- 1098 (1389)
T ss_pred             ceEEEeccCCCccCCcCHHHHHHHH---------hcCCEEEECCcEecCc-----cCHHHHHHhHHHHHHHHHHHHHh--
Confidence            688999999864210  11223332         2689999999976321     12445556899999999887743  


Q ss_pred             hcCCCCCeEEEEcCCccccccccc-CCc----cccccCcccC---CCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQ-VNN----ETITGKFFLR---SKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRH  161 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~-~~~----~~~~~~~~~~---~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~  161 (266)
                        .+ ..+++++||.+.+...... .+.    ..-.+..+..   .........|+.+|...+.++...+       ..+
T Consensus      1099 --~~-~~~~v~vSS~~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~-------~~g 1168 (1389)
T TIGR03443      1099 --GK-AKQFSFVSSTSALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAG-------KRG 1168 (1389)
T ss_pred             --CC-CceEEEEeCeeecCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHH-------hCC
Confidence              22 4589999998764321000 000    0000000000   0111123569999999998886532       247


Q ss_pred             eEEEEecCCcccCCccCcchhHHHHHHHHHH--HHh---------hcCCCHHHHHHHHHHHhcCCCC-cccceeecCCCc
Q 024553          162 VSVIAADPGVVKTNIMREVPSFLSLMAFTVL--KLL---------GLLQSPEKGINSVLDAALAPPE-TSGVYFFGGKGR  229 (266)
Q Consensus       162 i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~--~~~---------~~~~~p~~~a~~~~~~~~~~~~-~~G~~~~~~~g~  229 (266)
                      +.++.+.||.|..+..........+......  ..+         ..+...++++++++.++..+.. ..+..|...++.
T Consensus      1169 ~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~ 1248 (1389)
T TIGR03443      1169 LRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHP 1248 (1389)
T ss_pred             CCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCC
Confidence            8899999999976643322111111111110  011         1245799999999977655432 234455544444


Q ss_pred             c
Q 024553          230 T  230 (266)
Q Consensus       230 ~  230 (266)
                      .
T Consensus      1249 ~ 1249 (1389)
T TIGR03443      1249 R 1249 (1389)
T ss_pred             C
Confidence            3

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=97.91  E-value=0.00049  Score=61.63  Aligned_cols=168  Identities=14%  Similarity=0.045  Sum_probs=97.5

Q ss_pred             CcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcc
Q 024553           45 SIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFF  124 (266)
Q Consensus        45 ~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  124 (266)
                      .+|+|||+|+...+...  ..+-++.+.+|+.++..+++.+...    +  .++|++||...+.........++...   
T Consensus       184 ~~D~ViHlAa~~~~~~~--~~~p~~~~~~Nv~gT~nLleaa~~~----g--~r~V~~SS~~VYg~~~~~p~~E~~~~---  252 (436)
T PLN02166        184 EVDQIYHLACPASPVHY--KYNPVKTIKTNVMGTLNMLGLAKRV----G--ARFLLTSTSEVYGDPLEHPQKETYWG---  252 (436)
T ss_pred             CCCEEEECceeccchhh--ccCHHHHHHHHHHHHHHHHHHHHHh----C--CEEEEECcHHHhCCCCCCCCCccccc---
Confidence            58999999987543221  1234688999999999999888542    2  48999999876542211111111000   


Q ss_pred             cCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcccCCccCc----c-hhHHHHHHH-HHHHH----
Q 024553          125 LRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE----V-PSFLSLMAF-TVLKL----  194 (266)
Q Consensus       125 ~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~T~~~~~----~-~~~~~~~~~-~~~~~----  194 (266)
                       ...+......|+.+|.+.+.+++.+++..      ++.+..+.|+.+..+....    . ......... .....    
T Consensus       253 -~~~p~~p~s~Yg~SK~~aE~~~~~y~~~~------~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g  325 (436)
T PLN02166        253 -NVNPIGERSCYDEGKRTAETLAMDYHRGA------GVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDG  325 (436)
T ss_pred             -cCCCCCCCCchHHHHHHHHHHHHHHHHHh------CCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCC
Confidence             01122334579999999999998876653      5677777777776654211    1 111000000 00000    


Q ss_pred             --hhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCccccC
Q 024553          195 --LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNS  233 (266)
Q Consensus       195 --~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~~  233 (266)
                        ...+...+|++++++.++. . ...| .|+.+.++.+..
T Consensus       326 ~~~rdfi~V~Dva~ai~~~~~-~-~~~g-iyNIgs~~~~Si  363 (436)
T PLN02166        326 KQTRSFQYVSDLVDGLVALME-G-EHVG-PFNLGNPGEFTM  363 (436)
T ss_pred             CeEEeeEEHHHHHHHHHHHHh-c-CCCc-eEEeCCCCcEeH
Confidence              1235689999999986553 2 2345 455566665543

>CHL00194 ycf39 Ycf39; Provisional

Probab=97.82  E-value=0.00013  Score=62.46  Aligned_cols=159  Identities=9%  Similarity=-0.033  Sum_probs=94.2

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      .+.++.+|+++.+++.+++             ..+|+|||+++...       .+.....++|+.++..+++++.    +
T Consensus        44 ~v~~v~~Dl~d~~~l~~al-------------~g~d~Vi~~~~~~~-------~~~~~~~~~~~~~~~~l~~aa~----~   99 (317)
T CHL00194         44 GAELVYGDLSLPETLPPSF-------------KGVTAIIDASTSRP-------SDLYNAKQIDWDGKLALIEAAK----A   99 (317)
T ss_pred             CCEEEECCCCCHHHHHHHH-------------CCCCEEEECCCCCC-------CCccchhhhhHHHHHHHHHHHH----H
Confidence            4789999999998876655             25799999876421       1234567788888888877774    3


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCc
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV  171 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~  171 (266)
                      .+ -.++|++||..+.                     .+ +...|..+|...+.+.+          ..++.++.+.|+.
T Consensus       100 ~g-vkr~I~~Ss~~~~---------------------~~-~~~~~~~~K~~~e~~l~----------~~~l~~tilRp~~  146 (317)
T CHL00194        100 AK-IKRFIFFSILNAE---------------------QY-PYIPLMKLKSDIEQKLK----------KSGIPYTIFRLAG  146 (317)
T ss_pred             cC-CCEEEEecccccc---------------------cc-CCChHHHHHHHHHHHHH----------HcCCCeEEEeecH
Confidence            33 4599999986431                     11 11346777877766542          2466777788875


Q ss_pred             ccCCccCcchhHHHHHHHHH------HHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCccc
Q 024553          172 VKTNIMREVPSFLSLMAFTV------LKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  231 (266)
Q Consensus       172 v~T~~~~~~~~~~~~~~~~~------~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~  231 (266)
                      +..++.....  ........      ..+ ..+...+|+|++++.++..+ ...|..|+..+++.+
T Consensus       147 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~i~v~Dva~~~~~~l~~~-~~~~~~~ni~g~~~~  208 (317)
T CHL00194        147 FFQGLISQYA--IPILEKQPIWITNESTP-ISYIDTQDAAKFCLKSLSLP-ETKNKTFPLVGPKSW  208 (317)
T ss_pred             Hhhhhhhhhh--hhhccCCceEecCCCCc-cCccCHHHHHHHHHHHhcCc-cccCcEEEecCCCcc
Confidence            5322211100  00000000      000 12346799999998666544 345666766655544

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=97.79  E-value=3.9e-05  Score=64.78  Aligned_cols=174  Identities=12%  Similarity=0.032  Sum_probs=95.0

Q ss_pred             EecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCCCC
Q 024553           17 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPS   96 (266)
Q Consensus        17 ~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~   96 (266)
                      .+|+++.+.+.++++++           ++|+|||+||+..+  +...+.-+..+.+|+.++..+.+.+..    .  +.
T Consensus        34 ~~dl~d~~~~~~~~~~~-----------~pd~Vin~aa~~~~--~~ce~~p~~a~~iN~~~~~~la~~~~~----~--~~   94 (286)
T PF04321_consen   34 DLDLTDPEAVAKLLEAF-----------KPDVVINCAAYTNV--DACEKNPEEAYAINVDATKNLAEACKE----R--GA   94 (286)
T ss_dssp             CS-TTSHHHHHHHHHHH-------------SEEEE------H--HHHHHSHHHHHHHHTHHHHHHHHHHHH----C--T-
T ss_pred             hcCCCCHHHHHHHHHHh-----------CCCeEeccceeecH--HhhhhChhhhHHHhhHHHHHHHHHHHH----c--CC
Confidence            67999999998888765           47999999998532  222344678999999999999888843    2  57


Q ss_pred             eEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcccCCc
Q 024553           97 RIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI  176 (266)
Q Consensus        97 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~T~~  176 (266)
                      ++|++||...+......         ...+.....+...|+.+|...+..++.   ..     +  ....+-++++..+-
T Consensus        95 ~li~~STd~VFdG~~~~---------~y~E~d~~~P~~~YG~~K~~~E~~v~~---~~-----~--~~~IlR~~~~~g~~  155 (286)
T PF04321_consen   95 RLIHISTDYVFDGDKGG---------PYTEDDPPNPLNVYGRSKLEGEQAVRA---AC-----P--NALILRTSWVYGPS  155 (286)
T ss_dssp             EEEEEEEGGGS-SSTSS---------SB-TTS----SSHHHHHHHHHHHHHHH---H------S--SEEEEEE-SEESSS
T ss_pred             cEEEeeccEEEcCCccc---------ccccCCCCCCCCHHHHHHHHHHHHHHH---hc-----C--CEEEEecceecccC
Confidence            99999998765432111         122233445568899999999998865   21     2  55666777776662


Q ss_pred             cCcchhHHHHHHHHHHH--H-------hhcCCCHHHHHHHHHHHhcCCC---CcccceeecCCCcccc
Q 024553          177 MREVPSFLSLMAFTVLK--L-------LGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTVN  232 (266)
Q Consensus       177 ~~~~~~~~~~~~~~~~~--~-------~~~~~~p~~~a~~~~~~~~~~~---~~~G~~~~~~~g~~~~  232 (266)
                      ..++   ..+.......  .       .+.....+++|+.++.++....   ...|.| ..++.+.+.
T Consensus       156 ~~~~---~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giy-h~~~~~~~S  219 (286)
T PF04321_consen  156 GRNF---LRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIEKNLSGASPWGIY-HLSGPERVS  219 (286)
T ss_dssp             SSSH---HHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEE-E---BS-EE
T ss_pred             CCch---hhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHHhcccccccceeE-EEecCcccC
Confidence            2222   1111111110  0       1123478899999987655432   123444 434545454

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PLN02778 3,5-epimerase/4-reductase

Probab=97.79  E-value=0.00022  Score=60.59  Aligned_cols=122  Identities=12%  Similarity=0.004  Sum_probs=71.5

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCC-cCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS-RLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      .++.+...|+.+.+.+...++   .        .++|+|||+||...... ....++-.+.+++|+.++..+++.+... 
T Consensus        34 ~~V~~~~~~~~~~~~v~~~l~---~--------~~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~-  101 (298)
T PLN02778         34 IDFHYGSGRLENRASLEADID---A--------VKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRER-  101 (298)
T ss_pred             CEEEEecCccCCHHHHHHHHH---h--------cCCCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-
Confidence            356666778888776655443   2        35899999999864321 1122445789999999999999988542 


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccC-CCCCChhhcchHhHHHHHHHHHHHHH
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLR-SKCYPCARIYEYSKLCLLIFSYELHR  152 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Y~~sK~~~~~~~~~la~  152 (266)
                         +  .+.+++||...+......  +. -.+....+ ..+.+....|+.+|.+.+.+++.++.
T Consensus       102 ---g--v~~v~~sS~~vy~~~~~~--p~-~~~~~~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~~  157 (298)
T PLN02778        102 ---G--LVLTNYATGCIFEYDDAH--PL-GSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYEN  157 (298)
T ss_pred             ---C--CCEEEEecceEeCCCCCC--Cc-ccCCCCCcCCCCCCCCCchHHHHHHHHHHHHHhhc
Confidence               2  245555554432110000  00 00000111 11222336799999999999977653

>PRK05865 hypothetical protein; Provisional

Probab=97.73  E-value=0.00017  Score=68.96  Aligned_cols=144  Identities=11%  Similarity=0.007  Sum_probs=90.1

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      .+.++.+|+++.+++.++++             .+|+|||+|+...+           .+++|+.++..+++.+    ++
T Consensus        41 ~v~~v~gDL~D~~~l~~al~-------------~vD~VVHlAa~~~~-----------~~~vNv~GT~nLLeAa----~~   92 (854)
T PRK05865         41 SADFIAADIRDATAVESAMT-------------GADVVAHCAWVRGR-----------NDHINIDGTANVLKAM----AE   92 (854)
T ss_pred             CceEEEeeCCCHHHHHHHHh-------------CCCEEEECCCcccc-----------hHHHHHHHHHHHHHHH----HH
Confidence            47789999999998876652             48999999986422           4688999988776665    44


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCc
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV  171 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~  171 (266)
                      .+ .++||++||..                                  |.+.+.+++          ..++.+..+.|+.
T Consensus        93 ~g-vkr~V~iSS~~----------------------------------K~aaE~ll~----------~~gl~~vILRp~~  127 (854)
T PRK05865         93 TG-TGRIVFTSSGH----------------------------------QPRVEQMLA----------DCGLEWVAVRCAL  127 (854)
T ss_pred             cC-CCeEEEECCcH----------------------------------HHHHHHHHH----------HcCCCEEEEEece
Confidence            33 46999998731                                  666665442          2467888889998


Q ss_pred             ccCCccCcchhHHHHHHHHHHHHhh------cCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          172 VKTNIMREVPSFLSLMAFTVLKLLG------LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       172 v~T~~~~~~~~~~~~~~~~~~~~~~------~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      +..+.....   ............+      .+...+|++++++.++..+....|. |+.++++...
T Consensus       128 VYGP~~~~~---i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~ggv-yNIgsg~~~S  190 (854)
T PRK05865        128 IFGRNVDNW---VQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDSGP-VNLAAPGELT  190 (854)
T ss_pred             EeCCChHHH---HHHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCCCe-EEEECCCccc
Confidence            876642111   1000000000111      2467899999998665444333444 4445555443

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=97.71  E-value=0.0003  Score=66.58  Aligned_cols=120  Identities=15%  Similarity=0.035  Sum_probs=74.2

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCC-CcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS-SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .+.+..+|+++.+.+.+++.+           .++|+|||+|+..... .+...++-++.+++|+.++..+++.+...  
T Consensus       406 ~v~~~~~~l~d~~~v~~~i~~-----------~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~--  472 (668)
T PLN02260        406 AYEYGKGRLEDRSSLLADIRN-----------VKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCREN--  472 (668)
T ss_pred             eEEeeccccccHHHHHHHHHh-----------hCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHc--
Confidence            454567899998887766543           2589999999986432 22334456789999999999999998542  


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCC-CCCChhhcchHhHHHHHHHHHHHH
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRS-KCYPCARIYEYSKLCLLIFSYELH  151 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Y~~sK~~~~~~~~~la  151 (266)
                          +.+++++||...+.......  . -.+....++ .+.+....|+.+|.+.+.+++.++
T Consensus       473 ----g~~~v~~Ss~~v~~~~~~~~--~-~~~~p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~~  527 (668)
T PLN02260        473 ----GLLMMNFATGCIFEYDAKHP--E-GSGIGFKEEDKPNFTGSFYSKTKAMVEELLREYD  527 (668)
T ss_pred             ----CCeEEEEcccceecCCcccc--c-ccCCCCCcCCCCCCCCChhhHHHHHHHHHHHhhh
Confidence                23566776654322100000  0 000011111 222334679999999999997753

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=97.69  E-value=0.00096  Score=56.09  Aligned_cols=168  Identities=12%  Similarity=-0.011  Sum_probs=84.0

Q ss_pred             CCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCCC-CeEEEEcCCcccccccccCCcccccc
Q 024553           43 HSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVP-SRIVNVTSFTHRNVFNAQVNNETITG  121 (266)
Q Consensus        43 ~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-~~iv~vsS~~~~~~~~~~~~~~~~~~  121 (266)
                      ...+|+|||+||..........+..++.+++|+.++..+++.+..    .+.. .++++.|+...+......        
T Consensus        55 ~~~~D~Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~~~i~~S~~~~yg~~~~~--------  122 (292)
T TIGR01777        55 LEGADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAA----AEQKPKVFISASAVGYYGTSEDR--------  122 (292)
T ss_pred             cCCCCEEEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHh----cCCCceEEEEeeeEEEeCCCCCC--------
Confidence            357999999999753222223334467888999998888887743    2211 234444443322211000        


Q ss_pred             CcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcccCCccCcchhHHHHHHHHHHHHh------
Q 024553          122 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL------  195 (266)
Q Consensus       122 ~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~------  195 (266)
                       ...+..+......|+..+...+....    ...   ..++.++.+.|+.+..+..................++      
T Consensus       123 -~~~E~~~~~~~~~~~~~~~~~e~~~~----~~~---~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~g~~~~~  194 (292)
T TIGR01777       123 -VFTEEDSPAGDDFLAELCRDWEEAAQ----AAE---DLGTRVVLLRTGIVLGPKGGALAKMLPPFRLGLGGPLGSGRQW  194 (292)
T ss_pred             -CcCcccCCCCCChHHHHHHHHHHHhh----hch---hcCCceEEEeeeeEECCCcchhHHHHHHHhcCcccccCCCCcc
Confidence             01111111112223333333333222    222   3578999999999977642211111111100000011      


Q ss_pred             hcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          196 GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       196 ~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      ..+...+|+|+.+..++..+. ..|.|.. .+++.+.
T Consensus       195 ~~~i~v~Dva~~i~~~l~~~~-~~g~~~~-~~~~~~s  229 (292)
T TIGR01777       195 FSWIHIEDLVQLILFALENAS-ISGPVNA-TAPEPVR  229 (292)
T ss_pred             cccEeHHHHHHHHHHHhcCcc-cCCceEe-cCCCccC
Confidence            235689999999997765433 3465554 4445444

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN02503 fatty acyl-CoA reductase 2

Probab=97.49  E-value=0.0014  Score=60.80  Aligned_cols=196  Identities=13%  Similarity=0.147  Sum_probs=110.3

Q ss_pred             ccEEEEEecCCCHHH-H-HHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQS-V-LKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~-v-~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .+++++.+|++++.= + ....+.+.+         .+|+|||+|+....     .+..+..+++|+.|+..+++.+...
T Consensus       192 ~Ki~~v~GDl~d~~LGLs~~~~~~L~~---------~vDiVIH~AA~v~f-----~~~~~~a~~vNV~GT~nLLelA~~~  257 (605)
T PLN02503        192 SKLVPVVGNVCESNLGLEPDLADEIAK---------EVDVIINSAANTTF-----DERYDVAIDINTRGPCHLMSFAKKC  257 (605)
T ss_pred             ccEEEEEeeCCCcccCCCHHHHHHHHh---------cCCEEEECcccccc-----ccCHHHHHHHHHHHHHHHHHHHHHc
Confidence            479999999998720 0 011122322         58999999998641     1457889999999999999887543


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccc----------------------------cCc----c------------
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT----------------------------GKF----F------------  124 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~----------------------------~~~----~------------  124 (266)
                          +.-.++|++||...+....+.+......                            ...    .            
T Consensus       258 ----~~lk~fV~vSTayVyG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l  333 (605)
T PLN02503        258 ----KKLKLFLQVSTAYVNGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKM  333 (605)
T ss_pred             ----CCCCeEEEccCceeecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHh
Confidence                1134799999976554322111111110                            000    0            


Q ss_pred             -----cCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcccCCccCcchhHHH-------HHHHHHH
Q 024553          125 -----LRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-------LMAFTVL  192 (266)
Q Consensus       125 -----~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~-------~~~~~~~  192 (266)
                           ....-......|..+|+..+.+++.    .    ..++.+..+-|+.|.+.+...++....       .......
T Consensus       334 ~~~g~~~~~~~~~pNtYt~TK~lAE~lV~~----~----~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~  405 (605)
T PLN02503        334 KDLGLERAKLYGWQDTYVFTKAMGEMVINS----M----RGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGK  405 (605)
T ss_pred             hhcccchhhhCCCCChHHHHHHHHHHHHHH----h----cCCCCEEEEcCCEecccccCCccccccCccccchhhhheec
Confidence                 0001123347799999999998853    2    246788888888885544333221110       0000000


Q ss_pred             HHh----------hcCCCHHHHHHHHHHHhcC-CC--CcccceeecCCC--cccc
Q 024553          193 KLL----------GLLQSPEKGINSVLDAALA-PP--ETSGVYFFGGKG--RTVN  232 (266)
Q Consensus       193 ~~~----------~~~~~p~~~a~~~~~~~~~-~~--~~~G~~~~~~~g--~~~~  232 (266)
                      ..+          ......+.|+++++-+... ..  ...+..|....+  +++.
T Consensus       406 G~lr~~~~~~~~~~DiVPVD~vvna~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t  460 (605)
T PLN02503        406 GQLTGFLADPNGVLDVVPADMVVNATLAAMAKHGGAAKPEINVYQIASSVVNPLV  460 (605)
T ss_pred             cceeEEEeCCCeeEeEEeecHHHHHHHHHHHhhhcccCCCCCEEEeCCCCCCCeE
Confidence            000          1235788899988854211 21  235788886666  4444

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=97.37  E-value=0.0015  Score=51.04  Aligned_cols=145  Identities=17%  Similarity=0.022  Sum_probs=89.1

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      ...+.++.+|+.+.+++.+++             .+.|++|+++|....         +          ...++.++..+
T Consensus        38 ~~~~~~~~~d~~d~~~~~~al-------------~~~d~vi~~~~~~~~---------~----------~~~~~~~~~a~   85 (183)
T PF13460_consen   38 SPGVEIIQGDLFDPDSVKAAL-------------KGADAVIHAAGPPPK---------D----------VDAAKNIIEAA   85 (183)
T ss_dssp             CTTEEEEESCTTCHHHHHHHH-------------TTSSEEEECCHSTTT---------H----------HHHHHHHHHHH
T ss_pred             ccccccceeeehhhhhhhhhh-------------hhcchhhhhhhhhcc---------c----------ccccccccccc
Confidence            357999999999998887766             368999999976432         0          44556677777


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      ++.+ -.++|++||...+...+..+.           ....+....|...|...+.+.+          ..++....+.|
T Consensus        86 ~~~~-~~~~v~~s~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~e~~~~----------~~~~~~~ivrp  143 (183)
T PF13460_consen   86 KKAG-VKRVVYLSSAGVYRDPPGLFS-----------DEDKPIFPEYARDKREAEEALR----------ESGLNWTIVRP  143 (183)
T ss_dssp             HHTT-SSEEEEEEETTGTTTCTSEEE-----------GGTCGGGHHHHHHHHHHHHHHH----------HSTSEEEEEEE
T ss_pred             cccc-cccceeeeccccCCCCCcccc-----------cccccchhhhHHHHHHHHHHHH----------hcCCCEEEEEC
Confidence            7766 679999999775432111000           0011222456666655554441          24889999999


Q ss_pred             CcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Q 024553          170 GVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAAL  213 (266)
Q Consensus       170 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~  213 (266)
                      |++..+..........     .........+.+++|+.+++++.
T Consensus       144 ~~~~~~~~~~~~~~~~-----~~~~~~~~i~~~DvA~~~~~~l~  182 (183)
T PF13460_consen  144 GWIYGNPSRSYRLIKE-----GGPQGVNFISREDVAKAIVEALE  182 (183)
T ss_dssp             SEEEBTTSSSEEEESS-----TSTTSHCEEEHHHHHHHHHHHHH
T ss_pred             cEeEeCCCcceeEEec-----cCCCCcCcCCHHHHHHHHHHHhC
Confidence            9997665332110000     00001134589999999987653

...

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.08  E-value=0.0072  Score=54.42  Aligned_cols=67  Identities=13%  Similarity=0.052  Sum_probs=52.9

Q ss_pred             hhhHHHHHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhh
Q 024553           75 YIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNL  154 (266)
Q Consensus        75 ~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~  154 (266)
                      +.+.+.+++..++.|..   .|+||+++|..+.                       .....|+.+|+++..+++++++|+
T Consensus        99 l~~~~~~~~~~l~~l~~---~griv~i~s~~~~-----------------------~~~~~~~~akaal~gl~rsla~E~  152 (450)
T PRK08261         99 LKALYEFFHPVLRSLAP---CGRVVVLGRPPEA-----------------------AADPAAAAAQRALEGFTRSLGKEL  152 (450)
T ss_pred             HHHHHHHHHHHHHhccC---CCEEEEEcccccc-----------------------CCchHHHHHHHHHHHHHHHHHHHh
Confidence            44556777777887754   6799999997641                       122359999999999999999999


Q ss_pred             CCCCCCCeEEEEecCCc
Q 024553          155 GLDKSRHVSVIAADPGV  171 (266)
Q Consensus       155 ~~~~~~~i~v~~v~PG~  171 (266)
                          ..+++++.+.|+.
T Consensus       153 ----~~gi~v~~i~~~~  165 (450)
T PRK08261        153 ----RRGATAQLVYVAP  165 (450)
T ss_pred             ----hcCCEEEEEecCC
Confidence                4799999999875

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=97.06  E-value=0.00037  Score=56.75  Aligned_cols=59  Identities=8%  Similarity=0.165  Sum_probs=45.6

Q ss_pred             EEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHH
Q 024553           16 FQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTK   83 (266)
Q Consensus        16 i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~   83 (266)
                      ..||+++.+++.++++++.+      .++++|++|||||+.  .+..+.+.++|+++   +..+.+++.+
T Consensus        57 ~~~Dv~d~~s~~~l~~~v~~------~~g~iDiLVnnAgv~d~~~~~~~s~e~~~~~---~~~~~~~~~~  117 (227)
T TIGR02114        57 PNLSIREIETTKDLLITLKE------LVQEHDILIHSMAVSDYTPVYMTDLEQVQAS---DNLNEFLSKQ  117 (227)
T ss_pred             CcceeecHHHHHHHHHHHHH------HcCCCCEEEECCEeccccchhhCCHHHHhhh---cchhhhhccc
Confidence            45899999999999999988      568899999999976  34556677777766   4445555554

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=97.04  E-value=0.011  Score=47.28  Aligned_cols=167  Identities=10%  Similarity=-0.029  Sum_probs=87.8

Q ss_pred             EecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCC---CcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCC
Q 024553           17 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS---SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP   93 (266)
Q Consensus        17 ~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~   93 (266)
                      .|||++.++++++++..           ++-.+||.|+..+..   ...+.+-|...    +.-.-++++.+..+-    
T Consensus        38 d~DLt~~a~t~~lF~~e-----------kPthVIhlAAmVGGlf~N~~ynldF~r~N----l~indNVlhsa~e~g----   98 (315)
T KOG1431|consen   38 DADLTNLADTRALFESE-----------KPTHVIHLAAMVGGLFHNNTYNLDFIRKN----LQINDNVLHSAHEHG----   98 (315)
T ss_pred             cccccchHHHHHHHhcc-----------CCceeeehHhhhcchhhcCCCchHHHhhc----ceechhHHHHHHHhc----
Confidence            58999999999999644           455788888766432   12233333333    332233344443321    


Q ss_pred             CCCeEEEEcCCcccccc-cccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcc
Q 024553           94 VPSRIVNVTSFTHRNVF-NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVV  172 (266)
Q Consensus        94 ~~~~iv~vsS~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v  172 (266)
                       -.++++..|..-+-.. +-.++...     +....+-+....|+.+|..+.-..+.++.+++      ....++.|--+
T Consensus        99 -v~K~vsclStCIfPdkt~yPIdEtm-----vh~gpphpsN~gYsyAKr~idv~n~aY~~qhg------~~~tsviPtNv  166 (315)
T KOG1431|consen   99 -VKKVVSCLSTCIFPDKTSYPIDETM-----VHNGPPHPSNFGYSYAKRMIDVQNQAYRQQHG------RDYTSVIPTNV  166 (315)
T ss_pred             -hhhhhhhcceeecCCCCCCCCCHHH-----hccCCCCCCchHHHHHHHHHHHHHHHHHHHhC------Cceeeeccccc
Confidence             2255666665432211 11111111     11134555667799999888888888888864      45566666555


Q ss_pred             cCCccCcchh---HHHHHHHHH----------------HHHhhcCCCHHHHHHHHHHHhcC
Q 024553          173 KTNIMREVPS---FLSLMAFTV----------------LKLLGLLQSPEKGINSVLDAALA  214 (266)
Q Consensus       173 ~T~~~~~~~~---~~~~~~~~~----------------~~~~~~~~~p~~~a~~~~~~~~~  214 (266)
                      -.+--.-.+.   ....+....                ..|++.+...++.|+.++|++..
T Consensus       167 fGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~i~vlr~  227 (315)
T KOG1431|consen  167 FGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLFIWVLRE  227 (315)
T ss_pred             cCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHHHHHHHh
Confidence            4332211111   001111110                11344456788999999976643

>PLN00016 RNA-binding protein; Provisional

Probab=96.67  E-value=0.085  Score=46.35  Aligned_cols=157  Identities=10%  Similarity=-0.030  Sum_probs=83.0

Q ss_pred             EEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcC
Q 024553           13 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS   92 (266)
Q Consensus        13 ~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~   92 (266)
                      +.++.+|+.+   +.+++    .       ...+|+|||++|..                  ..+    ++.++...++.
T Consensus       112 v~~v~~D~~d---~~~~~----~-------~~~~d~Vi~~~~~~------------------~~~----~~~ll~aa~~~  155 (378)
T PLN00016        112 VKTVWGDPAD---VKSKV----A-------GAGFDVVYDNNGKD------------------LDE----VEPVADWAKSP  155 (378)
T ss_pred             ceEEEecHHH---HHhhh----c-------cCCccEEEeCCCCC------------------HHH----HHHHHHHHHHc
Confidence            6788888865   22222    1       13689999987631                  112    23344444544


Q ss_pred             CCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcc
Q 024553           93 PVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVV  172 (266)
Q Consensus        93 ~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v  172 (266)
                      + -.++|++||...+.......         ..+.....   .+. +|...+.+.+          ..++.++.+.|+.+
T Consensus       156 g-vkr~V~~SS~~vyg~~~~~p---------~~E~~~~~---p~~-sK~~~E~~l~----------~~~l~~~ilRp~~v  211 (378)
T PLN00016        156 G-LKQFLFCSSAGVYKKSDEPP---------HVEGDAVK---PKA-GHLEVEAYLQ----------KLGVNWTSFRPQYI  211 (378)
T ss_pred             C-CCEEEEEccHhhcCCCCCCC---------CCCCCcCC---Ccc-hHHHHHHHHH----------HcCCCeEEEeceeE
Confidence            4 46999999987543211000         00011111   112 6777776542          24678899999999


Q ss_pred             cCCccCcchhHHHHHHHHHH----HH-------hhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          173 KTNIMREVPSFLSLMAFTVL----KL-------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       173 ~T~~~~~~~~~~~~~~~~~~----~~-------~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      ..+.....  ...+......    .+       ...+...+|+|++++.++..++ ..|..|...+++.+.
T Consensus       212 yG~~~~~~--~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~-~~~~~yni~~~~~~s  279 (378)
T PLN00016        212 YGPGNNKD--CEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPK-AAGQIFNIVSDRAVT  279 (378)
T ss_pred             ECCCCCCc--hHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCcc-ccCCEEEecCCCccC
Confidence            87754321  1111110000    00       0124579999999996655433 345666656666554

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=95.39  E-value=0.082  Score=44.36  Aligned_cols=150  Identities=9%  Similarity=-0.093  Sum_probs=80.8

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCC-cceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSS-IQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~-ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .+..+.+|+.|.+++.++++...       .... +|.++++++...       +..            ...+.++...+
T Consensus        40 ~~~~~~~d~~d~~~l~~a~~~~~-------~~~g~~d~v~~~~~~~~-------~~~------------~~~~~~i~aa~   93 (285)
T TIGR03649        40 NEKHVKFDWLDEDTWDNPFSSDD-------GMEPEISAVYLVAPPIP-------DLA------------PPMIKFIDFAR   93 (285)
T ss_pred             CCccccccCCCHHHHHHHHhccc-------CcCCceeEEEEeCCCCC-------Chh------------HHHHHHHHHHH
Confidence            35567899999999988876532       2234 899999876421       000            11234455555


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                      +.+ -.+||++||.....                    ..+       .+...+.+.    +.     ..++....+.|+
T Consensus        94 ~~g-v~~~V~~Ss~~~~~--------------------~~~-------~~~~~~~~l----~~-----~~gi~~tilRp~  136 (285)
T TIGR03649        94 SKG-VRRFVLLSASIIEK--------------------GGP-------AMGQVHAHL----DS-----LGGVEYTVLRPT  136 (285)
T ss_pred             HcC-CCEEEEeeccccCC--------------------CCc-------hHHHHHHHH----Hh-----ccCCCEEEEecc
Confidence            555 56999999854311                    101       111122111    11     237888999999


Q ss_pred             cccCCccCcch-hHHH--H-HHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceee
Q 024553          171 VVKTNIMREVP-SFLS--L-MAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFF  224 (266)
Q Consensus       171 ~v~T~~~~~~~-~~~~--~-~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~  224 (266)
                      ++..++..... ....  . ...........+.+++|+|+.++.++..+....+.|..
T Consensus       137 ~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~l  194 (285)
T TIGR03649       137 WFMENFSEEFHVEAIRKENKIYSATGDGKIPFVSADDIARVAYRALTDKVAPNTDYVV  194 (285)
T ss_pred             HHhhhhcccccccccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCCCcCCCeEEe
Confidence            87655432110 0000  0 00000000113568999999999777665444444544

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=95.00  E-value=0.21  Score=41.72  Aligned_cols=157  Identities=15%  Similarity=0.108  Sum_probs=97.4

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      +++.++..|+.|+++++++++             .-+++||-.|.--+....+      .-++|+.+.-.+.+.+    +
T Consensus       109 GQvl~~~fd~~DedSIr~vvk-------------~sNVVINLIGrd~eTknf~------f~Dvn~~~aerlAric----k  165 (391)
T KOG2865|consen  109 GQVLFMKFDLRDEDSIRAVVK-------------HSNVVINLIGRDYETKNFS------FEDVNVHIAERLARIC----K  165 (391)
T ss_pred             cceeeeccCCCCHHHHHHHHH-------------hCcEEEEeeccccccCCcc------cccccchHHHHHHHHH----H
Confidence            579999999999999999884             3468999998743333332      2356777776666655    4


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                      ..+ --++|.+|+-.+                      .......|--+|++.+..++.   ++.       ..+.|.|.
T Consensus       166 e~G-VerfIhvS~Lga----------------------nv~s~Sr~LrsK~~gE~aVrd---afP-------eAtIirPa  212 (391)
T KOG2865|consen  166 EAG-VERFIHVSCLGA----------------------NVKSPSRMLRSKAAGEEAVRD---AFP-------EATIIRPA  212 (391)
T ss_pred             hhC-hhheeehhhccc----------------------cccChHHHHHhhhhhHHHHHh---hCC-------cceeechh
Confidence            433 458999998764                      244456678889888877753   332       23446777


Q ss_pred             cccCCccCcchhHHH-HHHHHHHHHhh-------cCCCHHHHHHHHHHHhcCCCCcccceee
Q 024553          171 VVKTNIMREVPSFLS-LMAFTVLKLLG-------LLQSPEKGINSVLDAALAPPETSGVYFF  224 (266)
Q Consensus       171 ~v~T~~~~~~~~~~~-~~~~~~~~~~~-------~~~~p~~~a~~~~~~~~~~~~~~G~~~~  224 (266)
                      .|....-+-...... +..+...+.++       ...-..+||.+|+.++-.+ .+.|+.|.
T Consensus       213 ~iyG~eDrfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp-~s~Gktye  273 (391)
T KOG2865|consen  213 DIYGTEDRFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDP-DSMGKTYE  273 (391)
T ss_pred             hhcccchhHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCc-cccCceee
Confidence            665443332222111 11121111111       1234678999999877666 67788775

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=94.92  E-value=0.35  Score=44.54  Aligned_cols=174  Identities=16%  Similarity=0.042  Sum_probs=104.7

Q ss_pred             CCccEEEEEecCCCHHHHHHHHHHHHHhhccCC--------CCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhH
Q 024553            9 KDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD--------MHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGA   78 (266)
Q Consensus         9 ~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~--------~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~   78 (266)
                      ++..+.++.+++++..+|+.+++-|-..=.++-        ..-.++.++=-|++.  +...+..+ .-+..+++-+++.
T Consensus       449 ~ga~LwvVpaN~~SysDVdAlIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~ags-raE~~~rilLw~V  527 (866)
T COG4982         449 YGAALWVVPANMGSYSDVDALIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGS-RAEFAMRILLWNV  527 (866)
T ss_pred             CCceEEEEeccccchhhHHHHHHHhccccccccCCcceecccccCcceeeecccCCccCccccCCc-hHHHHHHHHHHHH
Confidence            456788999999999999999998855211100        001345566555543  21222221 1345666777777


Q ss_pred             HHHHHhhHHHHhcCC--CCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCC
Q 024553           79 FFLTKLLLPLLKNSP--VPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGL  156 (266)
Q Consensus        79 ~~l~~~~~~~l~~~~--~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~  156 (266)
                      .+++-++.+.-...+  ..-+||.-+|.-.                     ..+.+-..|+-+|.+++.++.-+..+-.+
T Consensus       528 ~Rliggl~~~~s~r~v~~R~hVVLPgSPNr---------------------G~FGgDGaYgEsK~aldav~~RW~sEs~W  586 (866)
T COG4982         528 LRLIGGLKKQGSSRGVDTRLHVVLPGSPNR---------------------GMFGGDGAYGESKLALDAVVNRWHSESSW  586 (866)
T ss_pred             HHHHHHhhhhccccCcccceEEEecCCCCC---------------------CccCCCcchhhHHHHHHHHHHHhhccchh
Confidence            777766655433221  1245676666542                     24555688999999999888766665432


Q ss_pred             CCCCCeEEEEecCCccc-CCccCcchhHH-HHHHHHHHHHhhcCCCHHHHHHHHHHH
Q 024553          157 DKSRHVSVIAADPGVVK-TNIMREVPSFL-SLMAFTVLKLLGLLQSPEKGINSVLDA  211 (266)
Q Consensus       157 ~~~~~i~v~~v~PG~v~-T~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~a~~~~~~  211 (266)
                        ...+++.+..-||++ |.++....... ..+....     +..+++|.|..++.+
T Consensus       587 --a~~vsl~~A~IGWtrGTGLMg~Ndiiv~aiEk~GV-----~tyS~~EmA~~LLgL  636 (866)
T COG4982         587 --AARVSLAHALIGWTRGTGLMGHNDIIVAAIEKAGV-----RTYSTDEMAFNLLGL  636 (866)
T ss_pred             --hHHHHHhhhheeeeccccccCCcchhHHHHHHhCc-----eecCHHHHHHHHHhh
Confidence              356777788889997 55555433221 1221111     334899999988853

>PRK12320 hypothetical protein; Provisional

Probab=94.78  E-value=1.3  Score=42.21  Aligned_cols=147  Identities=10%  Similarity=0.035  Sum_probs=81.8

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      .+.++.+|+++.. +.+    +.         ..+|++||+|+....          ....+|+.++.++++.+    ++
T Consensus        41 ~ve~v~~Dl~d~~-l~~----al---------~~~D~VIHLAa~~~~----------~~~~vNv~Gt~nLleAA----~~   92 (699)
T PRK12320         41 RVDYVCASLRNPV-LQE----LA---------GEADAVIHLAPVDTS----------APGGVGITGLAHVANAA----AR   92 (699)
T ss_pred             CceEEEccCCCHH-HHH----Hh---------cCCCEEEEcCccCcc----------chhhHHHHHHHHHHHHH----HH
Confidence            5778999999873 322    21         258999999987421          11257888888888877    33


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCc
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV  171 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~  171 (266)
                      .+  .++|++||..+.                     +    ..|.    ..+.++    .      ..++.+..+-|+.
T Consensus        93 ~G--vRiV~~SS~~G~---------------------~----~~~~----~aE~ll----~------~~~~p~~ILR~~n  131 (699)
T PRK12320         93 AG--ARLLFVSQAAGR---------------------P----ELYR----QAETLV----S------TGWAPSLVIRIAP  131 (699)
T ss_pred             cC--CeEEEEECCCCC---------------------C----cccc----HHHHHH----H------hcCCCEEEEeCce
Confidence            33  489999876421                     0    0122    122222    1      1345677778888


Q ss_pred             ccCCccCcchhHHHHHHHHHHHHh-hc---CCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          172 VKTNIMREVPSFLSLMAFTVLKLL-GL---LQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       172 v~T~~~~~~~~~~~~~~~~~~~~~-~~---~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      +..+.......  ........... +.   +...+|++++++.++..  ...| .|+.++++.++
T Consensus       132 VYGp~~~~~~~--r~I~~~l~~~~~~~pI~vIyVdDvv~alv~al~~--~~~G-iyNIG~~~~~S  191 (699)
T PRK12320        132 PVGRQLDWMVC--RTVATLLRSKVSARPIRVLHLDDLVRFLVLALNT--DRNG-VVDLATPDTTN  191 (699)
T ss_pred             ecCCCCcccHh--HHHHHHHHHHHcCCceEEEEHHHHHHHHHHHHhC--CCCC-EEEEeCCCeeE
Confidence            87763322111  11111111111 11   23789999999865533  2345 66767776554

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=94.57  E-value=0.065  Score=44.34  Aligned_cols=157  Identities=17%  Similarity=0.113  Sum_probs=79.0

Q ss_pred             CcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcc
Q 024553           45 SIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFF  124 (266)
Q Consensus        45 ~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  124 (266)
                      ++|+|||-||..--....+.+.=++    =..|.+..++.+.....+...++++..-+|..++-..   -.+.-     +
T Consensus        56 ~~DavINLAG~~I~~rrWt~~~K~~----i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~---~~~~~-----~  123 (297)
T COG1090          56 GIDAVINLAGEPIAERRWTEKQKEE----IRQSRINTTEKLVELIAASETKPKVLISASAVGYYGH---SGDRV-----V  123 (297)
T ss_pred             CCCEEEECCCCccccccCCHHHHHH----HHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecC---CCcee-----e
Confidence            7999999999751111122222222    2456777778888877755445666655555543211   11110     1


Q ss_pred             cCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcccCCccCcchhHHHHHHHHHHHHhh------cC
Q 024553          125 LRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG------LL  198 (266)
Q Consensus       125 ~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~------~~  198 (266)
                      .|+ ..++.       -.+..+++.+-.+.......++||+.+.-|.|-.+-............+..-.++|      ..
T Consensus       124 tE~-~~~g~-------~Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SW  195 (297)
T COG1090         124 TEE-SPPGD-------DFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSW  195 (297)
T ss_pred             ecC-CCCCC-------ChHHHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeee
Confidence            111 11111       11222333222211100156999999999999765544433322222222222222      23


Q ss_pred             CCHHHHHHHHHHHhcCCCCcccce
Q 024553          199 QSPEKGINSVLDAALAPPETSGVY  222 (266)
Q Consensus       199 ~~p~~~a~~~~~~~~~~~~~~G~~  222 (266)
                      ...+|..+.+.+++..+ ..+|-|
T Consensus       196 IhieD~v~~I~fll~~~-~lsGp~  218 (297)
T COG1090         196 IHIEDLVNAILFLLENE-QLSGPF  218 (297)
T ss_pred             eeHHHHHHHHHHHHhCc-CCCCcc
Confidence            58999999999765543 445555

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=93.34  E-value=0.24  Score=44.44  Aligned_cols=146  Identities=14%  Similarity=0.157  Sum_probs=85.5

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .++..+.+|+++++---+-.+.- .      ....+|++||+|+...-     .|.++..+.+|..|+..+++.+....+
T Consensus        79 ~Kv~pi~GDi~~~~LGis~~D~~-~------l~~eV~ivih~AAtvrF-----de~l~~al~iNt~Gt~~~l~lak~~~~  146 (467)
T KOG1221|consen   79 EKVVPIAGDISEPDLGISESDLR-T------LADEVNIVIHSAATVRF-----DEPLDVALGINTRGTRNVLQLAKEMVK  146 (467)
T ss_pred             ecceeccccccCcccCCChHHHH-H------HHhcCCEEEEeeeeecc-----chhhhhhhhhhhHhHHHHHHHHHHhhh
Confidence            47889999999865322211111 0      12479999999998642     233678889999999999988866554


Q ss_pred             cCCCCCeEEEEcCCcccccccccC-----------CccccccCcccC--------CCCC--ChhhcchHhHHHHHHHHHH
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQV-----------NNETITGKFFLR--------SKCY--PCARIYEYSKLCLLIFSYE  149 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~-----------~~~~~~~~~~~~--------~~~~--~~~~~Y~~sK~~~~~~~~~  149 (266)
                      -    ...+.+|...+. .....+           +++.+.....+.        .+..  .....|.-+|+..+.+...
T Consensus       147 l----~~~vhVSTAy~n-~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~  221 (467)
T KOG1221|consen  147 L----KALVHVSTAYSN-CNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQK  221 (467)
T ss_pred             h----heEEEeehhhee-cccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHh
Confidence            2    477888876654 221111           111100000000        1111  1235688888888777643


Q ss_pred             HHHhhCCCCCCCeEEEEecCCcccCCccCcch
Q 024553          150 LHRNLGLDKSRHVSVIAADPGVVKTNIMREVP  181 (266)
Q Consensus       150 la~~~~~~~~~~i~v~~v~PG~v~T~~~~~~~  181 (266)
                      -        ..++-+..+.|.+|-+.+...++
T Consensus       222 ~--------~~~lPivIiRPsiI~st~~EP~p  245 (467)
T KOG1221|consen  222 E--------AENLPLVIIRPSIITSTYKEPFP  245 (467)
T ss_pred             h--------ccCCCeEEEcCCceeccccCCCC
Confidence            2        35667778888888666655543

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=92.98  E-value=0.98  Score=36.68  Aligned_cols=112  Identities=11%  Similarity=0.123  Sum_probs=72.2

Q ss_pred             EEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCC
Q 024553           15 AFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPV   94 (266)
Q Consensus        15 ~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~   94 (266)
                      +|..|+-|..++++++           -..+||-+||-.+...-   ..+...--..++|+.|..++++.+..+-     
T Consensus        91 yIy~DILD~K~L~eIV-----------Vn~RIdWL~HfSALLSA---vGE~NVpLA~~VNI~GvHNil~vAa~~k-----  151 (366)
T KOG2774|consen   91 YIYLDILDQKSLEEIV-----------VNKRIDWLVHFSALLSA---VGETNVPLALQVNIRGVHNILQVAAKHK-----  151 (366)
T ss_pred             chhhhhhccccHHHhh-----------cccccceeeeHHHHHHH---hcccCCceeeeecchhhhHHHHHHHHcC-----
Confidence            6778888888887766           34689999998776432   2233455678899999999988875542     


Q ss_pred             CCeEEEEcCCcccccc-cccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhC
Q 024553           95 PSRIVNVTSFTHRNVF-NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLG  155 (266)
Q Consensus        95 ~~~iv~vsS~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~  155 (266)
                       -++..-|.+++++.+ +....+ ++        .-..+...|+.||.-.+.+-..+..++.
T Consensus       152 -L~iFVPSTIGAFGPtSPRNPTP-dl--------tIQRPRTIYGVSKVHAEL~GEy~~hrFg  203 (366)
T KOG2774|consen  152 -LKVFVPSTIGAFGPTSPRNPTP-DL--------TIQRPRTIYGVSKVHAELLGEYFNHRFG  203 (366)
T ss_pred             -eeEeecccccccCCCCCCCCCC-Ce--------eeecCceeechhHHHHHHHHHHHHhhcC
Confidence             345445555554322 111111 11        1112346799999999999988887764

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=92.08  E-value=0.38  Score=39.26  Aligned_cols=137  Identities=9%  Similarity=0.033  Sum_probs=86.6

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      ++......+|++|...+.++++.|+           ++-++|-|+...  ..++.|--+.+-.+...|+..++.+...+-
T Consensus        82 ~~~mkLHYgDmTDss~L~k~I~~ik-----------PtEiYnLaAQSH--VkvSFdlpeYTAeVdavGtLRlLdAi~~c~  148 (376)
T KOG1372|consen   82 GASMKLHYGDMTDSSCLIKLISTIK-----------PTEVYNLAAQSH--VKVSFDLPEYTAEVDAVGTLRLLDAIRACR  148 (376)
T ss_pred             cceeEEeeccccchHHHHHHHhccC-----------chhhhhhhhhcc--eEEEeecccceeeccchhhhhHHHHHHhcC
Confidence            5678899999999999999998773           456777777642  122333345666777889998888775554


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      ...  .-++--.|+..-+.-    .     +..+-.+..++-+..+|+++|.+....+-.+...|.+-.-.||-+|+=+|
T Consensus       149 l~~--~VrfYQAstSElyGk----v-----~e~PQsE~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESP  217 (376)
T KOG1372|consen  149 LTE--KVRFYQASTSELYGK----V-----QEIPQSETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESP  217 (376)
T ss_pred             ccc--ceeEEecccHhhccc----c-----cCCCcccCCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCC
Confidence            332  245554554432220    0     01111224466667889999998777776666665322256888888777


Q ss_pred             C
Q 024553          170 G  170 (266)
Q Consensus       170 G  170 (266)
                      -
T Consensus       218 R  218 (376)
T KOG1372|consen  218 R  218 (376)
T ss_pred             c
Confidence            5

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=91.27  E-value=1.5  Score=36.66  Aligned_cols=97  Identities=14%  Similarity=0.105  Sum_probs=65.0

Q ss_pred             CcceeeEcCCCCCCCC-cCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCc
Q 024553           45 SIQLLINNAGILATSS-RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKF  123 (266)
Q Consensus        45 ~ld~lv~nAG~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  123 (266)
                      .+|-++|-|...+|.. ..+   -.+++.+|+.++...+..+...      +.|++..|+...+..+......++-++  
T Consensus        91 evD~IyhLAapasp~~y~~n---pvktIktN~igtln~lglakrv------~aR~l~aSTseVYgdp~~hpq~e~ywg--  159 (350)
T KOG1429|consen   91 EVDQIYHLAAPASPPHYKYN---PVKTIKTNVIGTLNMLGLAKRV------GARFLLASTSEVYGDPLVHPQVETYWG--  159 (350)
T ss_pred             HhhhhhhhccCCCCcccccC---ccceeeecchhhHHHHHHHHHh------CceEEEeecccccCCcccCCCcccccc--
Confidence            4778888888875533 222   2578999999999888776432      469999999887664322222222211  


Q ss_pred             ccCCCCCChhhcchHhHHHHHHHHHHHHHhh
Q 024553          124 FLRSKCYPCARIYEYSKLCLLIFSYELHRNL  154 (266)
Q Consensus       124 ~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~  154 (266)
                        ...+......|...|...+.++..+.++.
T Consensus       160 --~vnpigpr~cydegKr~aE~L~~~y~k~~  188 (350)
T KOG1429|consen  160 --NVNPIGPRSCYDEGKRVAETLCYAYHKQE  188 (350)
T ss_pred             --ccCcCCchhhhhHHHHHHHHHHHHhhccc
Confidence              02234446779999999999998887774

>PRK08309 short chain dehydrogenase; Provisional

Probab=88.19  E-value=1.1  Score=34.94  Aligned_cols=39  Identities=8%  Similarity=0.035  Sum_probs=33.0

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCC
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI   55 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~   55 (266)
                      .++.++.+|+++.+++.++++.+.+      ..+++|++|+..=.
T Consensus        47 ~~i~~~~~Dv~d~~sv~~~i~~~l~------~~g~id~lv~~vh~   85 (177)
T PRK08309         47 ESITPLPLDYHDDDALKLAIKSTIE------KNGPFDLAVAWIHS   85 (177)
T ss_pred             CcEEEEEccCCCHHHHHHHHHHHHH------HcCCCeEEEEeccc
Confidence            4688999999999999999999987      56889999875543

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=87.33  E-value=12  Score=29.20  Aligned_cols=113  Identities=15%  Similarity=0.101  Sum_probs=66.1

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      .+..+..|.+..++.   ++.          ...+|+++|+-|.......  .|   ..+.+..--.+.+.+.+    +.
T Consensus        63 ~v~q~~vDf~Kl~~~---a~~----------~qg~dV~FcaLgTTRgkaG--ad---gfykvDhDyvl~~A~~A----Ke  120 (238)
T KOG4039|consen   63 VVAQVEVDFSKLSQL---ATN----------EQGPDVLFCALGTTRGKAG--AD---GFYKVDHDYVLQLAQAA----KE  120 (238)
T ss_pred             eeeeEEechHHHHHH---Hhh----------hcCCceEEEeecccccccc--cC---ceEeechHHHHHHHHHH----Hh
Confidence            566777777665544   322          2468999999887632211  22   33333333333333333    33


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCc
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV  171 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~  171 (266)
                      .+ -..++.+||..+                      ..+..-.|-..|.-++.-+..|  .+.       ++..+.||.
T Consensus       121 ~G-ck~fvLvSS~GA----------------------d~sSrFlY~k~KGEvE~~v~eL--~F~-------~~~i~RPG~  168 (238)
T KOG4039|consen  121 KG-CKTFVLVSSAGA----------------------DPSSRFLYMKMKGEVERDVIEL--DFK-------HIIILRPGP  168 (238)
T ss_pred             CC-CeEEEEEeccCC----------------------Ccccceeeeeccchhhhhhhhc--ccc-------EEEEecCcc
Confidence            33 457999999775                      2233455888888888766332  221       778899999


Q ss_pred             ccCCccC
Q 024553          172 VKTNIMR  178 (266)
Q Consensus       172 v~T~~~~  178 (266)
                      +..+-..
T Consensus       169 ll~~R~e  175 (238)
T KOG4039|consen  169 LLGERTE  175 (238)
T ss_pred             eeccccc
Confidence            8655443

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=85.65  E-value=0.56  Score=38.25  Aligned_cols=35  Identities=11%  Similarity=-0.006  Sum_probs=25.8

Q ss_pred             CCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhH
Q 024553           44 SSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGA   78 (266)
Q Consensus        44 ~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~   78 (266)
                      +.+|++|||||+..  +....+.+.+.+++++|....
T Consensus        80 ~~~DivIh~AAvsd~~~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         80 KDHDVLIHSMAVSDYTPVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             cCCCEEEeCCccCCceehhhhhhhhhhhhhhhhhhhc
Confidence            56899999999863  334456777888888766554

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=82.15  E-value=16  Score=40.54  Aligned_cols=126  Identities=13%  Similarity=0.116  Sum_probs=73.4

Q ss_pred             CCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCC-CcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCCCCeEE
Q 024553           21 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS-SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIV   99 (266)
Q Consensus        21 s~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv   99 (266)
                      .+.+++..++..+..      ..+.++.+||-.+..... ...+...+.+.-...+...|.+.+.+.+.+...+ .+.++
T Consensus      1810 ~~~~~~~~~~~~~~~------~~~~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~~-~~~~~ 1882 (2582)
T TIGR02813      1810 IDDTSIEAVIKDIEE------KTAQIDGFIHLQPQHKSVADKVDAIELPEAAKQSLMLAFLFAKLLNVKLATNA-RASFV 1882 (2582)
T ss_pred             cchHHHHHHHHhhhc------cccccceEEEeccccccccccccccccchhhHHHHHHHHHHHHhhchhhccCC-CeEEE
Confidence            345666777777766      567899999977754321 1111111222222445556778887766665443 57888


Q ss_pred             EEcCCcccccccccCCccccccCcccCCCCCChh--hcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553          100 NVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCA--RIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus       100 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                      .++...|.+..   .+.           ....+.  ..-....+++.+++|++++|+.   .-.++.+.+.|.
T Consensus      1883 ~vsr~~G~~g~---~~~-----------~~~~~~~~~~~~~~~a~l~Gl~Ktl~~E~P---~~~~r~vDl~~~ 1938 (2582)
T TIGR02813      1883 TVSRIDGGFGY---SNG-----------DADSGTQQVKAELNQAALAGLTKTLNHEWN---AVFCRALDLAPK 1938 (2582)
T ss_pred             EEEecCCcccc---CCc-----------cccccccccccchhhhhHHHHHHhHHHHCC---CCeEEEEeCCCC
Confidence            88887653310   000           000000  0013457899999999999986   566777777775

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=81.46  E-value=2  Score=42.90  Aligned_cols=112  Identities=10%  Similarity=0.159  Sum_probs=84.5

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.+-..|++..+..++++++..+       .+.+..++|-|.+..  -+.+.+++.|+..-.--+.|+.++-+.-..
T Consensus      1820 GVqV~vsT~nitt~~ga~~Li~~s~k-------l~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe 1892 (2376)
T KOG1202|consen 1820 GVQVQVSTSNITTAEGARGLIEESNK-------LGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSRE 1892 (2376)
T ss_pred             CeEEEEecccchhhhhHHHHHHHhhh-------cccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhh
Confidence            45666777788888888888887754       688999999998773  456778899999999999999887665544


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHH
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELH  151 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la  151 (266)
                      ....   -.-+|..||+.+                    .++..+...|+.+..+++.++..-.
T Consensus      1893 ~C~~---LdyFv~FSSvsc--------------------GRGN~GQtNYG~aNS~MERiceqRr 1933 (2376)
T KOG1202|consen 1893 ICPE---LDYFVVFSSVSC--------------------GRGNAGQTNYGLANSAMERICEQRR 1933 (2376)
T ss_pred             hCcc---cceEEEEEeecc--------------------cCCCCcccccchhhHHHHHHHHHhh
Confidence            4332   236777777665                    4566777889999999999996533

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	266
3rd5_A	291	Crystal Structure Of A Putative Uncharacterized Pro		6e-12

>pdb|3RD5|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein From Mycobacterium Paratuberculosis Length = 291

Iteration: 1
 Score = 67.8 bits (164), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/178 (29%), Positives = 82/178 (46%), Gaps = 29/178 (16%)
Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSR 61
            +  +R    ++E  ++DL    SV +F D +          S   +LINNAGI+A    
Sbjct: 53  GEAAARTMAGQVEVRELDLQDLSSVRRFADGV----------SGADVLINNAGIMAVPYA 102
Query: 62  LTPEGYDQMMSTNYIGAFFXXXXXXXXXXNSPVP---SRIVNVTSFTHRNVFNAQVNNET 118
           LT +G++  + TN++G F           N  +P    R+V V+S  H   +  ++N E 
Sbjct: 103 LTVDGFESQIGTNHLGHF--------ALTNLLLPRLTDRVVTVSSMAH---WPGRINLED 151
Query: 119 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI 176
           +      RS+ Y     Y  SKL  L+F+ EL R L    S  +  +AA PG   TN+
Sbjct: 152 LN----WRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGS-PLRALAAHPGYSHTNL 204

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	266
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	5e-47
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	2e-37
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	7e-23
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	4e-20
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	3e-19
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	1e-16
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	4e-16
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	1e-15
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	1e-13
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	1e-13
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	2e-13
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	3e-13
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	1e-12
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	1e-12
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	1e-12
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	2e-12
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	2e-12
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	2e-12
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	4e-12
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	6e-12
4e4y_A	244	Short chain dehydrogenase family protein; structur	6e-12
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	2e-11
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	2e-11
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	2e-11
1spx_A	278	Short-chain reductase family member (5L265); paral	3e-11
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-11
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-11
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	7e-11
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	7e-11
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	8e-11
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	8e-11
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	8e-11
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	2e-10
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	2e-10
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	2e-10
1xhl_A	297	Short-chain dehydrogenase/reductase family member	3e-10
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	3e-10
1xq1_A	266	Putative tropinone reducatse; structural genomics,	3e-10
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	3e-10
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	4e-10
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	4e-10
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	5e-10
1xkq_A	280	Short-chain reductase family member (5D234); parra	6e-10
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	6e-10
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	6e-10
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	7e-10
3imf_A	257	Short chain dehydrogenase; structural genomics, in	7e-10
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	9e-10
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	1e-09
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	1e-09
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	1e-09
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	1e-09
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	2e-09
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	2e-09
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	2e-09
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	2e-09
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	3e-09
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	3e-09
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	3e-09
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	3e-09
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	4e-09
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	4e-09
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	4e-09
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	5e-09
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	5e-09
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	6e-09
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	7e-09
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	7e-09
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	8e-09
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	8e-09
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	8e-09
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	9e-09
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	1e-08
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	1e-08
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	1e-08
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	1e-08
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	1e-08
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	2e-08
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	2e-08
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	2e-08
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	2e-08
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	3e-08
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	4e-08
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	4e-08
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	5e-08
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	6e-08
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	7e-08
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	7e-08
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	7e-08
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	8e-08
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	1e-07
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	1e-07
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	1e-07
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	1e-07
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	1e-07
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	1e-07
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	1e-07
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	1e-07
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	1e-07
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	1e-07
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	2e-07
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	2e-07
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	2e-07
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	2e-07
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	2e-07
3rih_A	293	Short chain dehydrogenase or reductase; structural	2e-07
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	2e-07
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	3e-07
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	3e-07
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	3e-07
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	4e-07
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	4e-07
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	4e-07
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	4e-07
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	4e-07
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	5e-07
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	5e-07
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	5e-07
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	6e-07
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	6e-07
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	7e-07
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	7e-07
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	7e-07
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	7e-07
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	8e-07
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	8e-07
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	8e-07
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	9e-07
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	9e-07
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	9e-07
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	9e-07
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	1e-06
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	1e-06
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	1e-06
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	1e-06
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	1e-06
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	1e-06
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	2e-06
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	2e-06
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	2e-06
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	2e-06
3cxt_A	291	Dehydrogenase with different specificities; rossma	2e-06
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	2e-06
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	2e-06
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	2e-06
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	3e-06
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	3e-06
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	3e-06
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	3e-06
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	4e-06
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	4e-06
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	4e-06
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	4e-06
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	5e-06
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	5e-06
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	6e-06
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	6e-06
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	6e-06
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	7e-06
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	7e-06
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	8e-06
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	8e-06
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	9e-06
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	9e-06
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	1e-05
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	1e-05
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	1e-05
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	1e-05
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	2e-05
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	2e-05
4dqx_A	277	Probable oxidoreductase protein; structural genomi	2e-05
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	2e-05
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	2e-05
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	3e-05
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	4e-05
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	4e-05
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	5e-05
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	5e-05
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	6e-05
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	6e-05
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	1e-04
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	1e-04
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	2e-04
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	2e-04
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	3e-04
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	5e-04
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	8e-04

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score =  157 bits (399), Expect = 5e-47
 Identities = 69/247 (27%), Positives = 105/247 (42%), Gaps = 28/247 (11%)

Query: 11  ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQM 70
            ++E  ++DL    SV +F D +          S   +LINNAGI+A    LT +G++  
Sbjct: 62  GQVEVRELDLQDLSSVRRFADGV----------SGADVLINNAGIMAVPYALTVDGFESQ 111

Query: 71  MSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCY 130
           + TN++G F LT LLLP L       R+V V+S  H      ++N E +      RS+ Y
Sbjct: 112 IGTNHLGHFALTNLLLPRLT-----DRVVTVSSMAHW---PGRINLEDLN----WRSRRY 159

Query: 131 PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFT 190
                Y  SKL  L+F+ EL R L       +  +AA PG   TN+       L     +
Sbjct: 160 SPWLAYSQSKLANLLFTSELQRRLT-AAGSPLRALAAHPGYSHTNLQGASGRKLGDALMS 218

Query: 191 VLKLLGLLQSPEKGINSVLDAALAPPETSGVY----FFGGKGRTVNSSALSFNSKLAGEL 246
               + +    + G    L AA               + G+ + V  S  + ++ +A  L
Sbjct: 219 AATRV-VATDADFGARQTLYAASQDLPGDSFVGPRFGYLGRTQPVGRSRRAKDAGMAAAL 277

Query: 247 WTTSCNL 253
           W  S  L
Sbjct: 278 WALSEQL 284

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score =  132 bits (334), Expect = 2e-37
 Identities = 55/249 (22%), Positives = 94/249 (37%), Gaps = 54/249 (21%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSR 61
             + +     R    Q+D+   QS+   +D L++       +  + +L+NNAGI    + 
Sbjct: 47  QQLQAEGLSPRF--HQLDIDDLQSIRALRDFLRKE------YGGLDVLVNNAGIAFKVAD 98

Query: 62  LTP--EGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN-------A 112
            TP     +  M TN+ G   +   LLPL+K      R+VNV+S                
Sbjct: 99  PTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQG---RVVNVSSIMSVRALKSCSPELQQ 155

Query: 113 QVNNETITG--------------KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLD- 157
           +  +ETIT               K  +  K    +  Y  +K+ + + S    R L    
Sbjct: 156 KFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQR 215

Query: 158 KSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPE 217
           K   + + A  PG V+T++     +                +SPE+G  + +  AL PP+
Sbjct: 216 KGDKILLNACCPGWVRTDMAGPKAT----------------KSPEEGAETPVYLALLPPD 259

Query: 218 T---SGVYF 223
                G + 
Sbjct: 260 AEGPHGQFV 268

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 94.2 bits (234), Expect = 7e-23
 Identities = 56/298 (18%), Positives = 96/298 (32%), Gaps = 105/298 (35%)

Query: 4   ITSRNKDARLEA--------------FQVDLSS-FQSVLKFKDSLQQWLLDSDMHSSIQL 48
           +T R+     EA               Q+D++    ++    D ++           + +
Sbjct: 41  LTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKT------HFGKLDI 94

Query: 49  LINNAGILATS--------------------------------SRLTPEGYDQMMSTNYI 76
           L+NNAG+   S                                   T E  ++ +  NY 
Sbjct: 95  LVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYN 154

Query: 77  GAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFF------------ 124
           G   +T++L+PLL+ S    RIVNV+S T        V+NET                  
Sbjct: 155 GVKSVTEVLIPLLQLSD-SPRIVNVSSSTGSL---KYVSNETALEILGDGDALTEERIDM 210

Query: 125 -------------LRSKCYPCARI-YEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG 170
                        + +  +P     Y  SK CL  ++  L   +         V    PG
Sbjct: 211 VVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRVLANKI-----PKFQVNCVCPG 265

Query: 171 VVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPE-TSGVYFFGGK 227
           +VKT +   + +                 + E+G   V+  AL P +  SG ++   +
Sbjct: 266 LVKTEMNYGIGN----------------YTAEEGAEHVVRIALFPDDGPSGFFYDCSE 307

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score = 85.9 bits (213), Expect = 4e-20
 Identities = 36/231 (15%), Positives = 71/231 (30%), Gaps = 37/231 (16%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSR 61
            ++ ++  D ++     DL +   V +   ++++      +   +  LINNA  L   S+
Sbjct: 51  EELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLL--LINNAATLGDVSK 108

Query: 62  -----LTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP-VPSRIVNVTSFTHRNVFNAQVN 115
                      +   + N      LT   L   ++SP +   +VN++S      +     
Sbjct: 109 GFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGL 168

Query: 116 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN 175
                         Y CA      K    +      + L  +    V V++  PG +  +
Sbjct: 169 --------------Y-CA-----GKAARDMLY----QVLAAE-EPSVRVLSYAPGPLDND 203

Query: 176 IMREVPS----FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVY 222
           + +                 LK  G L         +L         SG +
Sbjct: 204 MQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLLGLLQKDTFQSGAH 254

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 83.2 bits (206), Expect = 3e-19
 Identities = 43/231 (18%), Positives = 83/231 (35%), Gaps = 54/231 (23%)

Query: 9   KDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPE 65
           KD+R+    + ++  +S+  F   + + +        + LLINNAG+L    T++     
Sbjct: 49  KDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD----GLSLLINNAGVLLSYGTNTEPNRA 104

Query: 66  GYDQMMSTNYIGAFFLTKLLLPLLKNSPVP----------SRIVNVTSFTHRNVFNAQVN 115
              + +  N      LT+ LLPLLKN+             + ++ ++S            
Sbjct: 105 VIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISS------------ 152

Query: 116 NETITGKFFLRSKCYPCARIYEY--SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVK 173
                G     +       +  Y  SK  + +F   L  +L   K  +V V+   PG V+
Sbjct: 153 ---GLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDL---KDDNVLVVNFCPGWVQ 206

Query: 174 TNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLD-AALAPPETSGVYF 223
           TN+  +  +                 + E+    ++          +G +F
Sbjct: 207 TNLGGKNAAL----------------TVEQSTAELISSFNKLDNSHNGRFF 241

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 76.6 bits (189), Expect = 1e-16
 Identities = 40/233 (17%), Positives = 76/233 (32%), Gaps = 58/233 (24%)

Query: 7   RNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---T 63
               + +   ++DL +F +  K    ++    D      + +L NNAGI   S+R+    
Sbjct: 68  AKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQ----GLNVLFNNAGIAPKSARITAVR 123

Query: 64  PEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVP----------SRIVNVTSFTHRNVFNAQ 113
            +     + TN +    L K  LPLLK +             + I+N++S          
Sbjct: 124 SQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSS---------- 173

Query: 114 VNNETITGKFFLRSKCYPCARIYEY--SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV 171
                I G     +       +Y Y  SK  L   +  L  +L     + +  ++  PG 
Sbjct: 174 -----ILGSIQGNTD----GGMYAYRTSKSALNAATKSLSVDL---YPQRIMCVSLHPGW 221

Query: 172 VKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLD-AALAPPETSGVYF 223
           VKT++                               ++   +    + +G + 
Sbjct: 222 VKTDMGGSSAPL----------------DVPTSTGQIVQTISKLGEKQNGGFV 258

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score = 74.6 bits (184), Expect = 4e-16
 Identities = 39/220 (17%), Positives = 69/220 (31%), Gaps = 56/220 (25%)

Query: 5   TSRNKDA----------RLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNA 53
            +R++            R      D++    + +    +++           I  L+ NA
Sbjct: 34  VARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGH-------GKIDSLVANA 86

Query: 54  GILATSS---RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF 110
           G+L        +    + ++   N+     L  + LP LK +     +V V+S      F
Sbjct: 87  GVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKT--NGNVVFVSSDACNMYF 144

Query: 111 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG 170
           ++                 Y  +     SK  L  F+  L       + R V  IA  PG
Sbjct: 145 SSWGA--------------Y-GS-----SKAALNHFAMTLAN-----EERQVKAIAVAPG 179

Query: 171 VVKTNIMREVP--------SFLSLMAFTVLKLLGLLQSPE 202
           +V T++   +         S   L  F  LK    L    
Sbjct: 180 IVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSS 219

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score = 73.7 bits (182), Expect = 1e-15
 Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 7/116 (6%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS- 60
            +I S    A   +   +L S   V     SL   L +    +   +LINNAGI   +  
Sbjct: 50  YEIQSNGGSA--FSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFI 107

Query: 61  -RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN 115
              T + +D+M+S N    FF+ +  L  L+++   SRI+N++S   R      + 
Sbjct: 108 EETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN---SRIINISSAATRISLPDFIA 160

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score = 68.4 bits (168), Expect = 1e-13
 Identities = 34/196 (17%), Positives = 61/196 (31%), Gaps = 47/196 (23%)

Query: 4   ITSRNKDARLE---------------AFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQL 48
           +T+R+K+  L+                    +       +F     +          + +
Sbjct: 57  VTARSKE-TLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL------MGGLDM 109

Query: 49  LINNAGILATSS--RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH 106
           LI N     + +          + M  N++    LT   LP+LK S     IV V+S   
Sbjct: 110 LILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS--NGSIVVVSS--- 164

Query: 107 RNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA 166
                       + GK        P    Y  SK  L  F   + +   + +  +VS+  
Sbjct: 165 ------------LAGKVAY-----PMVAAYSASKFALDGFFSSIRKEYSVSRV-NVSITL 206

Query: 167 ADPGVVKTNIMREVPS 182
              G++ T    +  S
Sbjct: 207 CVLGLIDTETAMKAVS 222

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score = 68.0 bits (167), Expect = 1e-13
 Identities = 40/211 (18%), Positives = 69/211 (32%), Gaps = 40/211 (18%)

Query: 7   RNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTP 64
           +   A++  F VD S+ + +      ++           + +L+NNAG++ TS       
Sbjct: 76  KGLGAKVHTFVVDCSNREDIYSSAKKVKAE------IGDVSILVNNAGVVYTSDLFATQD 129

Query: 65  EGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFF 124
              ++    N +  F+ TK  LP +  +     IV V S                 G   
Sbjct: 130 PQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVAS---------------AAGHVS 173

Query: 125 LRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL 184
           +     P    Y  SK   + F   L   L   +   V      P  V T  ++   + L
Sbjct: 174 V-----PFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPSTSL 228

Query: 185 SLMAFTVLKLLGLLQSPEKGINSVLDAALAP 215
                     L     PE+ +N ++   L  
Sbjct: 229 -------GPTL----EPEEVVNRLMHGILTE 248

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score = 66.8 bits (164), Expect = 2e-13
 Identities = 32/225 (14%), Positives = 62/225 (27%), Gaps = 53/225 (23%)

Query: 4   ITSRNKDA----------RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNA 53
           +  R               +     DL+  + V     +  +W          +L+++ A
Sbjct: 32  MMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEW------GGLPELVLHCA 85

Query: 54  GI--LATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN 111
           G          T E   ++M +N +    + +  + L+        + NV S   +    
Sbjct: 86  GTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGER--GGVLANVLSSAAQVGKA 143

Query: 112 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV 171
            +                Y CA     SK  +  F   L   L   K   + ++   P  
Sbjct: 144 NESL--------------Y-CA-----SKWGMRGFLESLRAEL---KDSPLRLVNLYPSG 180

Query: 172 VKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP 216
           +++                         +PE     +LDA  A  
Sbjct: 181 IRSEFWDNTDHVDP----------SGFMTPEDAAAYMLDALEARS 215

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score = 66.4 bits (163), Expect = 3e-13
 Identities = 30/186 (16%), Positives = 57/186 (30%), Gaps = 48/186 (25%)

Query: 4   ITSRNKDARLEA-----------FQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINN 52
           +T R++  +L                DL+S Q V +  + L          S    ++++
Sbjct: 30  LTGRSES-KLSTVTNCLSNNVGYRARDLASHQEVEQLFEQL---------DSIPSTVVHS 79

Query: 53  AGI--LATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF 110
           AG           PE    ++  N   A  + + L+   K+   P  +V + S       
Sbjct: 80  AGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQ--PVNVVMIMS------- 130

Query: 111 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG 170
                      +     +       Y   K  +      +   L   K + + +IA  PG
Sbjct: 131 --------TAAQ-----QPKAQESTYCAVKWAVKGLIESVRLEL---KGKPMKIIAVYPG 174

Query: 171 VVKTNI 176
            + T  
Sbjct: 175 GMATEF 180

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score = 65.0 bits (159), Expect = 1e-12
 Identities = 36/207 (17%), Positives = 71/207 (34%), Gaps = 41/207 (19%)

Query: 1   MADITSRNKDARLEAFQVDLSSFQSVLK--FKDSLQQWLLDSDMHSSIQLLINNAGILAT 58
           +A++ + N    +     D++   +  K   K    Q         ++ +LIN AGIL  
Sbjct: 45  LAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL-------KTVDILINGAGIL-- 95

Query: 59  SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL--KNSPVPSRIVNVTSFTHRNVFNAQVNN 116
                    ++ ++ N+ G    T  +L     +       I N+ S             
Sbjct: 96  ----DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICS------------- 138

Query: 117 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI 176
             +TG             +Y  SK  ++ F+  L +         V+  + +PG+ +T +
Sbjct: 139 --VTGF-----NAIHQVPVYSASKAAVVSFTNSLAKLAP---ITGVTAYSINPGITRTPL 188

Query: 177 MREVPSFLSLMAFTVLKL-LGLLQSPE 202
           +    S+L +       L     Q+ E
Sbjct: 189 VHTFNSWLDVEPRVAELLLSHPTQTSE 215

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score = 64.9 bits (159), Expect = 1e-12
 Identities = 26/124 (20%), Positives = 45/124 (36%), Gaps = 21/124 (16%)

Query: 4   ITSRNKDA----------RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNA 53
           +T RN+            R+ A + D++    +     +            +I LL  NA
Sbjct: 37  LTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAG------QTLGAIDLLHINA 90

Query: 54  GI--LATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN 111
           G+  L    +++   YD+  + N  GAFF  + L PL++       IV  +S        
Sbjct: 91  GVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREG---GSIVFTSSVADEGGHP 147

Query: 112 AQVN 115
               
Sbjct: 148 GMSV 151

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score = 65.5 bits (160), Expect = 1e-12
 Identities = 32/186 (17%), Positives = 60/186 (32%), Gaps = 36/186 (19%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS- 60
           A + +      +   Q+D++S +      D ++           + +L NNAG+      
Sbjct: 50  ATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR------FGPVSILCNNAGVNLFQPI 103

Query: 61  -RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPS-----RIVNVTSFTHRNVFNAQV 114
              + + +D ++  N  G        +P +             +VN  S           
Sbjct: 104 EESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTAS----------- 152

Query: 115 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKT 174
               +               IY  +K  +   S  LH +L   +   VSV+   PG+VK+
Sbjct: 153 ----MAAFL-----AAGSPGIYNTTKFAVRGLSESLHYSLLKYEIG-VSVLC--PGLVKS 200

Query: 175 NIMREV 180
            I    
Sbjct: 201 YIYASD 206

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score = 64.9 bits (159), Expect = 2e-12
 Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 23/117 (19%)

Query: 4   ITSRNKDA------------RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLIN 51
           I +R+ +A              +A   DLSS     +   +L       ++ + + +L+N
Sbjct: 58  ICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQAL------GELSARLDILVN 111

Query: 52  NAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPV---PSRIVNVTS 103
           NAG    A        G++++M  N    F   + LLPLL+ S     P+R++N+ S
Sbjct: 112 NAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGS 168

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score = 64.1 bits (157), Expect = 2e-12
 Identities = 27/189 (14%), Positives = 53/189 (28%), Gaps = 44/189 (23%)

Query: 4   ITSRNKDARLEA---------FQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG 54
              RN +  L A          + D+          D L+           +  L++ A 
Sbjct: 33  ALGRNPE-HLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNL-------DHVDTLVHAAA 84

Query: 55  I--LATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA 112
           +    T    +   +   +  N I    L++ LLP L+ +     ++ + S         
Sbjct: 85  VARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAA--SGCVIYINSGAGNGPHPG 142

Query: 113 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVV 172
                            Y  A     SK  L   +    +      +  + V    PG  
Sbjct: 143 NTI--------------Y-AA-----SKHALRGLADAFRKEEA---NNGIRVSTVSPGPT 179

Query: 173 KTNIMREVP 181
            T +++ + 
Sbjct: 180 NTPMLQGLM 188

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score = 64.6 bits (158), Expect = 2e-12
 Identities = 34/178 (19%), Positives = 64/178 (35%), Gaps = 28/178 (15%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS- 60
           A+  S      L  ++ DLS+ + +L    +++        HS + + INNAG+    + 
Sbjct: 74  AECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR------SQHSGVDICINNAGLARPDTL 127

Query: 61  -RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPS-RIVNVTSFTHRNVFNAQVNNET 118
              +  G+  M + N +     T+     +K   V    I+N+ S +   V         
Sbjct: 128 LSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLP------- 180

Query: 119 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI 176
                            Y  +K  +   +  L + L   ++ H+      PGVV+T  
Sbjct: 181 -----------LSVTHFYSATKYAVTALTEGLRQELREAQT-HIRATCISPGVVETQF 226

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score = 63.8 bits (156), Expect = 4e-12
 Identities = 39/177 (22%), Positives = 68/177 (38%), Gaps = 33/177 (18%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI---LAT 58
             I     +A++   Q+D++  + +  F ++L            I +L+NNAG       
Sbjct: 78  KTIDQEFPNAKVHVAQLDITQAEKIKPFIENL------PQEFKDIDILVNNAGKALGSDR 131

Query: 59  SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET 118
             ++  E    +  TN      +T+ +LP+ +       IVN+ S               
Sbjct: 132 VGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNS-GDIVNLGS--------------- 175

Query: 119 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN 175
           I G+       YP   IY  SK  +  F+  L + L    +  + VI   PG+V+T 
Sbjct: 176 IAGR-----DAYPTGSIYCASKFAVGAFTDSLRKEL---INTKIRVILIAPGLVETE 224

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score = 63.0 bits (154), Expect = 6e-12
 Identities = 43/188 (22%), Positives = 76/188 (40%), Gaps = 46/188 (24%)

Query: 4   ITSRNKDARLEA-------------FQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLI 50
           +T R ++ RL+A               +D+    ++    D+L       +  ++++ LI
Sbjct: 50  LTGRREE-RLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLP------EEFATLRGLI 102

Query: 51  NNAGI---LATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR 107
           NNAG+      +     + +D M+ TN  G  + T+LLLP L      + IVN+ S    
Sbjct: 103 NNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGS---- 158

Query: 108 NVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA 167
                      + GK       YP + +Y  +K  +  FS  L  +L       V V   
Sbjct: 159 -----------VAGK-----WPYPGSHVYGGTKAFVEQFSLNLRCDLQ---GTGVRVTNL 199

Query: 168 DPGVVKTN 175
           +PG+ ++ 
Sbjct: 200 EPGLCESE 207

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score = 62.9 bits (154), Expect = 6e-12
 Identities = 24/104 (23%), Positives = 38/104 (36%), Gaps = 13/104 (12%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS- 60
            DI        L+  + DL+  Q +          +LD   + S   +  NAGIL   S 
Sbjct: 35  IDIQQSFSAENLKFIKADLTKQQDITN--------VLDIIKNVSFDGIFLNAGILIKGSI 86

Query: 61  -RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
             +  E   +++  N   + +  K L   LK     + IV   S
Sbjct: 87  FDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG---ASIVFNGS 127

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 60.7 bits (148), Expect = 2e-11
 Identities = 17/106 (16%), Positives = 35/106 (33%), Gaps = 19/106 (17%)

Query: 4   ITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSR 61
              R+         VD+++  S+ K  + + +  +D         +++  G    +  + 
Sbjct: 31  TAGRHS----GDVTVDITNIDSIKKMYEQVGK--VD--------AIVSATGSATFSPLTE 76

Query: 62  LTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR 107
           LTPE     +S+   G   L  L +  L +          T     
Sbjct: 77  LTPEKNAVTISSKLGGQINLVLLGIDSLNDK---GSFTLTTGIMME 119

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 61.5 bits (150), Expect = 2e-11
 Identities = 11/104 (10%), Positives = 27/104 (25%), Gaps = 13/104 (12%)

Query: 4   ITSRNKD-ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL 62
                ++     +F +  S  + +    + +            +   +  AG  +  +  
Sbjct: 51  SIDFRENPNADHSFTIKDSGEEEIKSVIEKIN------SKSIKVDTFVCAAGGWSGGNAS 104

Query: 63  ---TPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
                +    M+  N   AF    +   LL         V   +
Sbjct: 105 SDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQG---GLFVLTGA 145

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score = 61.4 bits (150), Expect = 2e-11
 Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 14/95 (14%)

Query: 15  AFQVDLSSFQSVLKFKDSLQQWL--LDSDMHSSIQLLINNAGILATSSRL---TPEGYDQ 69
           A  ++ ++ Q   +    ++     LD         L++NA I+   + L     E + Q
Sbjct: 70  ALNLENATAQQYRELAARVEHEFGRLD--------GLLHNASIIGPRTPLEQLPDEDFMQ 121

Query: 70  MMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF 104
           +M  N    F LT+ LLPLLK S   S I   +S 
Sbjct: 122 VMHVNVNATFMLTRALLPLLKRSEDAS-IAFTSSS 155

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score = 61.4 bits (150), Expect = 3e-11
 Identities = 29/139 (20%), Positives = 48/139 (34%), Gaps = 32/139 (23%)

Query: 49  LINNAGIL------ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVT 102
           L+NNAG         T +  + E YD  ++ N      LTK  +P L ++     IVN++
Sbjct: 90  LVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST--KGEIVNIS 147

Query: 103 SFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLD-KSRH 161
           S                                Y  +K  +  ++    RN  +D     
Sbjct: 148 SIASGLHATPDFPY-------------------YSIAKAAIDQYT----RNTAIDLIQHG 184

Query: 162 VSVIAADPGVVKTNIMREV 180
           + V +  PG+V T     +
Sbjct: 185 IRVNSISPGLVATGFGSAM 203

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score = 61.0 bits (149), Expect = 3e-11
 Identities = 33/199 (16%), Positives = 69/199 (34%), Gaps = 38/199 (19%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS 60
           ++I      A   A + D    +++ +  +++++           + +L+N+AGI  ++ 
Sbjct: 74  SEIEQAGGRAV--AIRADNRDAEAIEQAIRETVEAL-------GGLDILVNSAGIWHSAP 124

Query: 61  --RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET 118
               T   +D++M+ N+   F   +     L +     RI+ + S     V    ++   
Sbjct: 125 LEETTVADFDEVMAVNFRAPFVAIRSASRHLGDG---GRIITIGSNLAELVPWPGISL-- 179

Query: 119 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMR 178
                            Y  SK  L   +  L R+LG    R ++V    PG   T++  
Sbjct: 180 -----------------YSASKAALAGLTKGLARDLG---PRGITVNIVHPGSTDTDMNP 219

Query: 179 EVPSFL-SLMAFTVLKLLG 196
                  +          G
Sbjct: 220 ADGDHAEAQRERIATGSYG 238

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score = 61.0 bits (149), Expect = 3e-11
 Identities = 21/117 (17%), Positives = 47/117 (40%), Gaps = 15/117 (12%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS 60
             I +    A     Q D+S   +V + F  + + +         + +L+NNAGI+  ++
Sbjct: 70  GKIEAAGGKAL--TAQADVSDPAAVRRLFATAEEAF-------GGVDVLVNNAGIMPLTT 120

Query: 61  --RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN 115
                   +D++++ N  G F   +     L+      RI+N+++     +  +   
Sbjct: 121 IAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVG---GRIINMSTSQVGLLHPSYGI 174

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score = 59.8 bits (146), Expect = 7e-11
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%)

Query: 49  LINNAGILATSSRL---TPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF 104
           +++NAG+L     +    P+ +  +M  N    F LT+ LLPLL  S   S +V  +S 
Sbjct: 96  VLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGS-LVFTSSS 153

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score = 59.9 bits (146), Expect = 7e-11
 Identities = 20/105 (19%), Positives = 43/105 (40%), Gaps = 15/105 (14%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS 60
           A++          A Q D+S    V+  F  ++  +         +  +++N+G+     
Sbjct: 64  AELKKLGAQG--VAIQADISKPSEVVALFDKAVSHF-------GGLDFVMSNSGMEVWCD 114

Query: 61  --RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
              +T E +D++ + N  G FF+ +  L   +      RI+  +S
Sbjct: 115 ELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG---GRIILTSS 156

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score = 59.9 bits (146), Expect = 8e-11
 Identities = 23/114 (20%), Positives = 50/114 (43%), Gaps = 15/114 (13%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS 60
           ++I +   DA   A + D+     ++K F  ++  +         + + ++N+G+++   
Sbjct: 61  SEIKALGSDA--IAIKADIRQVPEIVKLFDQAVAHF-------GHLDIAVSNSGVVSFGH 111

Query: 61  --RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA 112
              +T E +D++ S N  G FF+ +     L       RIV  +S T ++    
Sbjct: 112 LKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEG---GRIVLTSSNTSKDFSVP 162

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score = 59.9 bits (146), Expect = 8e-11
 Identities = 19/97 (19%), Positives = 39/97 (40%), Gaps = 10/97 (10%)

Query: 9   KDARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI-LATSSRLTPEG 66
           + A   A   D S    ++        Q        SS++ +++NA   LA +     + 
Sbjct: 69  RQAGAVALYGDFSCETGIMAFIDLLKTQT-------SSLRAVVHNASEWLAETPGEEADN 121

Query: 67  YDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           + +M S + +  + +     PLL  S   + IV+++ 
Sbjct: 122 FTRMFSVHMLAPYLINLHCEPLLTASE-VADIVHISD 157

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score = 59.8 bits (146), Expect = 8e-11
 Identities = 17/105 (16%), Positives = 39/105 (37%), Gaps = 15/105 (14%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS 60
            ++  +        +Q DLS+ + V K F  + +++         + + IN  G +    
Sbjct: 56  DELEDQGAKV--ALYQSDLSNEEEVAKLFDFAEKEF-------GKVDIAINTVGKVLKKP 106

Query: 61  --RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
               +   +D M + N   A+F  K     +  +     I+ + +
Sbjct: 107 IVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPN---GHIITIAT 148

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score = 58.7 bits (143), Expect = 2e-10
 Identities = 19/106 (17%), Positives = 35/106 (33%), Gaps = 15/106 (14%)

Query: 15  AFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQM 70
           A + DL++   V      +  ++         I  L++ AG L     +       + Q+
Sbjct: 62  AIKADLTNAAEVEAAISAAADKF-------GEIHGLVHVAGGLIARKTIAEMDEAFWHQV 114

Query: 71  MSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV-FNAQVN 115
           +  N    F   K  LP +        IV  +S   R+      + 
Sbjct: 115 LDVNLTSLFLTAKTALPKMAKG---GAIVTFSSQAGRDGGGPGALA 157

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score = 58.9 bits (143), Expect = 2e-10
 Identities = 26/182 (14%), Positives = 57/182 (31%), Gaps = 33/182 (18%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS- 60
             +  +  DA       D+     +++  D   +          + ++ +NAGI+     
Sbjct: 73  NGLRGQGFDAH--GVVCDVRHLDEMVRLADEAFRL------LGGVDVVFSNAGIVVAGPL 124

Query: 61  -RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETI 119
            ++  + +  ++  +  G+    +  LP L        I    S                
Sbjct: 125 AQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTAS---------------F 169

Query: 120 TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE 179
            G              Y  +K  ++  +  L R +  +    VSV+   P VV+T ++  
Sbjct: 170 AGLV-----PNAGLGTYGVAKYGVVGLAETLAREVKPNGIG-VSVLC--PMVVETKLVSN 221

Query: 180 VP 181
             
Sbjct: 222 SE 223

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 58.3 bits (142), Expect = 2e-10
 Identities = 39/186 (20%), Positives = 71/186 (38%), Gaps = 47/186 (25%)

Query: 4   ITSRNKDARLEA-----------FQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINN 52
            T R ++ RL+             Q+D+ +  ++ +   SL           +I +L+NN
Sbjct: 29  ATGRRQE-RLQELKDELGDNLYIAQLDVRNRAAIEEMLASLP------AEWCNIDILVNN 81

Query: 53  AGI---LATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV 109
           AG+   +  + + + E ++ M+ TN  G  ++T+ +LP +        I+N+ S      
Sbjct: 82  AGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNH-GHIINIGS------ 134

Query: 110 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLD-KSRHVSVIAAD 168
                      G        Y    +Y  +K  +  FS     NL  D     V V   +
Sbjct: 135 ---------TAGS-----WPYAGGNVYGATKAFVRQFS----LNLRTDLHGTAVRVTDIE 176

Query: 169 PGVVKT 174
           PG+V  
Sbjct: 177 PGLVGG 182

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score = 58.8 bits (143), Expect = 3e-10
 Identities = 30/177 (16%), Positives = 53/177 (29%), Gaps = 36/177 (20%)

Query: 9   KDARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS----RLT 63
              ++ A   D++           +L ++         I +L+NNAG             
Sbjct: 76  PAEKINAVVADVTEASGQDDIINTTLAKF-------GKIDILVNNAGANLADGTANTDQP 128

Query: 64  PEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKF 123
            E Y +    N+     +T+     L  +     IVNV+S       ++           
Sbjct: 129 VELYQKTFKLNFQAVIEMTQKTKEHLIKT--KGEIVNVSSIVAGPQAHSGYPY------- 179

Query: 124 FLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV 180
                       Y  +K  L  ++     +L       V V +  PG V T  M  +
Sbjct: 180 ------------YACAKAALDQYTRCTAIDLI---QHGVRVNSVSPGAVATGFMGAM 221

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score = 58.7 bits (142), Expect = 3e-10
 Identities = 21/92 (22%), Positives = 43/92 (46%), Gaps = 11/92 (11%)

Query: 15  AFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMM 71
              VD+   Q +    + +++++         I +L+NNA  ++ ++      +  D MM
Sbjct: 105 PCIVDVRDEQQISAAVEKAIKKF-------GGIDILVNNASAISLTNTLDTPTKRLDLMM 157

Query: 72  STNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           + N  G +  +K  +P LK S V   I+N++ 
Sbjct: 158 NVNTRGTYLASKACIPYLKKSKVA-HILNISP 188

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score = 57.9 bits (141), Expect = 3e-10
 Identities = 25/101 (24%), Positives = 40/101 (39%), Gaps = 12/101 (11%)

Query: 7   RNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRL 62
           + K  ++     D S      K   ++      S     + +LINN G            
Sbjct: 59  QKKGFQVTGSVCDASLRPEREKLMQTVS-----SMFGGKLDILINNLGAIRSKPTL--DY 111

Query: 63  TPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           T E +   +STN   A+ L++L  PLLK S     I+ ++S
Sbjct: 112 TAEDFSFHISTNLESAYHLSQLAHPLLKAS-GCGNIIFMSS 151

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score = 58.0 bits (141), Expect = 3e-10
 Identities = 23/105 (21%), Positives = 40/105 (38%), Gaps = 11/105 (10%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLKF-KDSLQQWLLDSDMHSSIQLLINNAGI--LAT 58
           + +  R   ARL A   D+     V  F +   +             +L+NNAG   ++T
Sbjct: 50  SALRQRFPGARLFASVCDVLDALQVRAFAEACERTL-------GCASILVNNAGQGRVST 102

Query: 59  SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
            +  T E + + +   +       +  LP L++      IV V S
Sbjct: 103 FAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADA-AIVCVNS 146

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score = 57.9 bits (141), Expect = 4e-10
 Identities = 26/114 (22%), Positives = 38/114 (33%), Gaps = 21/114 (18%)

Query: 4   ITSRNKDA----------RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNA 53
           IT R KD                Q D ++   + +  + ++           I +L  NA
Sbjct: 58  ITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAE------AGRIDVLFVNA 111

Query: 54  GI--LATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT 105
           G   +     +T E YD     N  G  F  +  LPLL      S +V   S  
Sbjct: 112 GGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARG---SSVVLTGSTA 162

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score = 57.2 bits (139), Expect = 4e-10
 Identities = 40/190 (21%), Positives = 66/190 (34%), Gaps = 43/190 (22%)

Query: 4   ITSRNKDARLEA----------FQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNA 53
           + +R++  RL+A             D+       +   +++      +    +  L+NNA
Sbjct: 34  LMARDEK-RLQALAAELEGALPLPGDVREEGDWARAVAAME------EAFGELSALVNNA 86

Query: 54  GI--LATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN 111
           G+  +     LT E +  ++ TN  GAF   +  +P L      + IVNV S        
Sbjct: 87  GVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGT-IVNVGS-------- 137

Query: 112 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV 171
                  + GK       +     Y  SK  LL  +     +L     R V  +   PG 
Sbjct: 138 -------LAGK-----NPFKGGAAYNASKFGLLGLAGAAMLDLREANVR-VVNVL--PGS 182

Query: 172 VKTNIMREVP 181
           V T      P
Sbjct: 183 VDTGFAGNTP 192

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score = 57.7 bits (140), Expect = 5e-10
 Identities = 14/102 (13%), Positives = 33/102 (32%), Gaps = 13/102 (12%)

Query: 15  AFQVDLSSFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGI--LATSSRLTPEGYDQM 70
               D+    +V           +    +    I + +NNA    L +   +  + +D M
Sbjct: 69  PIVGDIRDGDAV--------AAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLM 120

Query: 71  MSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA 112
                 G + +++  +P +K    P  I+ ++          
Sbjct: 121 NGIQVRGTYAVSQSCIPHMKGRDNP-HILTLSPPIRLEPKWL 161

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score = 57.6 bits (140), Expect = 6e-10
 Identities = 22/99 (22%), Positives = 39/99 (39%), Gaps = 16/99 (16%)

Query: 15  AFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI------LATSSRLTPEGY 67
           +   D+++     +    +L+Q+         I +L+NNAG         T +    + Y
Sbjct: 62  SVVADVTTEDGQDQIINSTLKQF-------GKIDVLVNNAGAAIPDAFGTTGTDQGIDIY 114

Query: 68  DQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH 106
            + +  N      +TK + P L  S     IVNV+S   
Sbjct: 115 HKTLKLNLQAVIEMTKKVKPHLVAS--KGEIVNVSSIVA 151

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score = 57.2 bits (139), Expect = 6e-10
 Identities = 30/174 (17%), Positives = 56/174 (32%), Gaps = 33/174 (18%)

Query: 15  AFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMM 71
              +D++   +      ++ ++            +L+NNAGI        +T E   Q+ 
Sbjct: 57  FVGLDVTDKANFDSAIDEAAEKL-------GGFDVLVNNAGIAQIKPLLEVTEEDLKQIY 109

Query: 72  STNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYP 131
           S N    FF  +          V  +I+N  S      F                   Y 
Sbjct: 110 SVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSA--------------Y- 154

Query: 132 CARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS 185
                  +K  +   +    + L     +  +V A  PG+V T +  ++ + LS
Sbjct: 155 ST-----TKFAVRGLTQAAAQELA---PKGHTVNAYAPGIVGTGMWEQIDAELS 200

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score = 57.2 bits (139), Expect = 6e-10
 Identities = 18/105 (17%), Positives = 50/105 (47%), Gaps = 15/105 (14%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS 60
           A I     DA     + ++   + +++ F+++++ +         + ++ +N+G+++   
Sbjct: 72  AAIKKNGSDA--ACVKANVGVVEDIVRMFEEAVKIF-------GKLDIVCSNSGVVSFGH 122

Query: 61  --RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
              +TPE +D++ + N  G FF+ +     L+      R++ + S
Sbjct: 123 VKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG---GRLILMGS 164

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score = 56.8 bits (138), Expect = 7e-10
 Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 36/184 (19%)

Query: 2   ADITSRNKDA-RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI-LATS 59
            +I   NK         +D++           +         + ++ +L+N A + +  S
Sbjct: 49  DEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIH------QKYGAVDILVNAAAMFMDGS 102

Query: 60  SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK--NSPVPSRIVNVTSFTHRNVFNAQVNNE 117
                + + ++M  N I  + + K +  ++K   +     I NV S              
Sbjct: 103 LSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKN---GYIFNVAS-------------- 145

Query: 118 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIM 177
               K       +    IY  +K  LL  +  L+R L       + V    PG V T++ 
Sbjct: 146 -RAAK-----YGFADGGIYGSTKFALLGLAESLYRELA---PLGIRVTTLCPGWVNTDMA 196

Query: 178 REVP 181
           ++  
Sbjct: 197 KKAG 200

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score = 57.1 bits (139), Expect = 7e-10
 Identities = 19/116 (16%), Positives = 47/116 (40%), Gaps = 23/116 (19%)

Query: 4   ITSRNKDA-------------RLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLL 49
           IT R K+              ++   Q+D+ +   + K  +   +++         I +L
Sbjct: 35  ITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF-------GRIDIL 87

Query: 50  INNAGI--LATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           INNA    +  +  L+  G++ +++    G F+ ++ +        +   I+N+ +
Sbjct: 88  INNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVA 143

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score = 56.8 bits (138), Expect = 9e-10
 Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 10/100 (10%)

Query: 7   RNKDARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLT 63
           R K   +E    DL S     K  +     +         + +L+NNAG++    +   T
Sbjct: 66  REKGLNVEGSVCDLLSRTERDKLMQTVAHVF------DGKLNILVNNAGVVIHKEAKDFT 119

Query: 64  PEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
            + Y+ +M TN+  A+ L+++  PLLK S     ++ ++S
Sbjct: 120 EKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSS 158

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score = 56.8 bits (138), Expect = 1e-09
 Identities = 25/108 (23%), Positives = 43/108 (39%), Gaps = 15/108 (13%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS 60
           A IT    +A   A   D+ +   +   F    +Q+         +  L+NNAGI+    
Sbjct: 69  AAITESGGEA--VAIPGDVGNAADIAAMFSAVDRQF-------GRLDGLVNNAGIVDYPQ 119

Query: 61  RL---TPEGYDQMMSTNYIGAFFLTKLLLPLL--KNSPVPSRIVNVTS 103
           R+   + E  ++M+  N  G+       +  +    S     IVNV+S
Sbjct: 120 RVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSS 167

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score = 56.5 bits (137), Expect = 1e-09
 Identities = 38/238 (15%), Positives = 73/238 (30%), Gaps = 60/238 (25%)

Query: 4   ITSRNKDA-------------RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLI 50
           IT R+ D              +      D S    V    + + +     +    + +L+
Sbjct: 34  ITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDR-----EQQGRLDVLV 88

Query: 51  NNAGILATSS---------RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNV 101
           NNA     +                +D + +    G +F +     L+  +     IV +
Sbjct: 89  NNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAG-QGLIVVI 147

Query: 102 TSFT-HRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSR 160
           +S    + +FN                        Y   K      + +    L      
Sbjct: 148 SSPGSLQYMFNV----------------------PYGVGKAACDKLAADCAHELR---RH 182

Query: 161 HVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK----LLGLLQSPEKGINSVLDAALA 214
            VS ++  PG+V+T +++E  +   ++   VLK         ++ E     V   ALA
Sbjct: 183 GVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCV--VALA 238

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score = 56.3 bits (137), Expect = 1e-09
 Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 10/100 (10%)

Query: 7   RNKDARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLT 63
           R+K  ++EA   DLSS     +        +      H  + +L+NNAGI+    +   T
Sbjct: 54  RSKGFKVEASVCDLSSRSERQELMNTVANHF------HGKLNILVNNAGIVIYKEAKDYT 107

Query: 64  PEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
            E Y  +MS N+  A+ L+ L  P LK S     +V ++S
Sbjct: 108 VEDYSLIMSINFEAAYHLSVLAHPFLKAS-ERGNVVFISS 146

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 56.4 bits (137), Expect = 1e-09
 Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 14/100 (14%)

Query: 11  ARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS----RLTPE 65
           AR+   + DL+   S        + ++         I  L+NNAGI +        L PE
Sbjct: 79  ARVIFLRADLADLSSHQATVDAVVAEF-------GRIDCLVNNAGIASIVRDDFLDLKPE 131

Query: 66  GYDQMMSTNYIGAFFLTKLLL-PLLKNSPVPS-RIVNVTS 103
            +D ++  N  G  F T+ +L  +L +    S  I+N+TS
Sbjct: 132 NFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITS 171

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score = 55.6 bits (135), Expect = 2e-09
 Identities = 36/188 (19%), Positives = 72/188 (38%), Gaps = 49/188 (26%)

Query: 4   ITSRNKDARLEA--------------FQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLL 49
           + +R +  R+EA                +D++   SV  F  +        D    I +L
Sbjct: 33  LGARRQA-RIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAV------DTWGRIDVL 85

Query: 50  INNAGILATS--SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR 107
           +NNAG++  S  + +  + +++M+  N  G  +    +LP+++       I+N+ S    
Sbjct: 86  VNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQ-IINIGS---- 140

Query: 108 NVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA 167
                      I           P A +Y  +K  +   S      L  + + ++ V   
Sbjct: 141 -----------IGAL-----SVVPTAAVYCATKFAVRAIS----DGLRQEST-NIRVTCV 179

Query: 168 DPGVVKTN 175
           +PGVV++ 
Sbjct: 180 NPGVVESE 187

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score = 55.8 bits (135), Expect = 2e-09
 Identities = 30/209 (14%), Positives = 55/209 (26%), Gaps = 48/209 (22%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS- 60
           A+I +        A  +D  +   V  F ++          H+ +++ I N G       
Sbjct: 49  AEIEAAGGRIV--ARSLDARNEDEVTAFLNAADA-------HAPLEVTIFNVGANVNFPI 99

Query: 61  -RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS------FTHRNVFNAQ 113
              T   + ++        F   +    L+       +I    +       +    F + 
Sbjct: 100 LETTDRVFRKVWEMACWAGFVSGRESARLMLAH-GQGKIFFTGATASLRGGSGFAAFAS- 157

Query: 114 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVK 173
                   KF LR+                   +  + R L         +I      V 
Sbjct: 158 -------AKFGLRA------------------VAQSMARELMPKNIHVAHLII--DSGVD 190

Query: 174 TNIMREVPSFLSLMAFTVLKLLGLLQSPE 202
           T  +RE      +     L    LL  P 
Sbjct: 191 TAWVRERRE--QMFGKDALANPDLLMPPA 217

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score = 55.7 bits (135), Expect = 2e-09
 Identities = 15/106 (14%), Positives = 31/106 (29%), Gaps = 19/106 (17%)

Query: 15  AFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI-------------LATSSR 61
             + DLS   S+L   + +      +       +L+NNA                A  ++
Sbjct: 66  LCKGDLSLSSSLLDCCEDIIDCSFRA--FGRCDVLVNNASAYYPTPLLPGDDTNGAADAK 123

Query: 62  LTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPV----PSRIVNVTS 103
                  ++  +N +   FL +                  +VN+  
Sbjct: 124 PIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD 169

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 54.9 bits (133), Expect = 3e-09
 Identities = 29/223 (13%), Positives = 58/223 (26%), Gaps = 59/223 (26%)

Query: 4   ITSRNKDA--------RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI 55
           ++ R   A           A   DL+            +  L   +    + LL++  G 
Sbjct: 27  LSGRRAGALAELAREVGARALPADLADELEA-------KALL---EEAGPLDLLVHAVGK 76

Query: 56  --LATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ 113
              A+      +  ++M++ + + A      +L   +      R V   +          
Sbjct: 77  AGRASVREAGRDLVEEMLAAHLLTAA----FVLKHARFQKGA-RAVFFGA---------- 121

Query: 114 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVK 173
                            P    Y  +K  L  +     + L       V ++      V 
Sbjct: 122 -----YPRYV-----QVPGFAAYAAAKGALEAYLEAARKEL---LREGVHLVLVRLPAVA 168

Query: 174 TNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP 216
           T +   +          +        SPE+    VL+     P
Sbjct: 169 TGLWAPLGGP---PKGAL--------SPEEAARKVLEGLFREP 200

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score = 55.2 bits (134), Expect = 3e-09
 Identities = 16/106 (15%), Positives = 35/106 (33%), Gaps = 15/106 (14%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI--LAT 58
            +I            + ++     + + F+   + +         + + +NNA    L  
Sbjct: 47  EEIEKLGVKVL--VVKANVGQPAKIKEMFQQIDETF-------GRLDVFVNNAASGVLRP 97

Query: 59  SSRLTPEGYDQMMSTNYIGAFFLTKLLLP-LLKNSPVPSRIVNVTS 103
              L    +D  M+ N     F  +     + KN      IV+++S
Sbjct: 98  VMELEETHWDWTMNINAKALLFCAQEAAKLMEKNG--GGHIVSISS 141

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score = 55.2 bits (134), Expect = 3e-09
 Identities = 18/105 (17%), Positives = 51/105 (48%), Gaps = 12/105 (11%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL--AT 58
            +I     +A   A + D++    V+   + +++++         + ++INNAG+    +
Sbjct: 50  EEIKKVGGEA--IAVKGDVTVESDVINLVQSAIKEF-------GKLDVMINNAGLENPVS 100

Query: 59  SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           S  ++   +++++ TN  GAF  ++  +     + +   ++N++S
Sbjct: 101 SHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSS 145

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score = 54.9 bits (133), Expect = 3e-09
 Identities = 39/184 (21%), Positives = 61/184 (33%), Gaps = 38/184 (20%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATS 59
            +  +       +    D+S    V +    +       + +  I  L+NNAG+      
Sbjct: 51  LECRAEGALT--DTITADISDMADVRRLTTHIV------ERYGHIDCLVNNAGVGRFGAL 102

Query: 60  SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK--NSPVPSRIVNVTSFTHRNVFNAQVNNE 117
           S LT E +D  M+TN  G FFLT+ L  L++  +S     I  +TS      F       
Sbjct: 103 SDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHS---GHIFFITSVAATKAFRHSSI-- 157

Query: 118 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIM 177
                       Y C      SK         +          +V +    PG V T + 
Sbjct: 158 ------------Y-CM-----SKFGQRGLVETMRLYAR---KCNVRITDVQPGAVYTPMW 196

Query: 178 REVP 181
            +V 
Sbjct: 197 GKVD 200

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score = 54.9 bits (133), Expect = 4e-09
 Identities = 20/92 (21%), Positives = 35/92 (38%), Gaps = 11/92 (11%)

Query: 15  AFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMM 71
           A + D+     V      ++  +         I +L+NNA    L  +     + +D M 
Sbjct: 66  ALKCDIREEDQVRAAVAATVDTF-------GGIDILVNNASAIWLRGTLDTPMKRFDLMQ 118

Query: 72  STNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
             N  G+F   +  LP L  +P P  I+ +  
Sbjct: 119 QVNARGSFVCAQACLPHLLQAPNP-HILTLAP 149

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score = 54.5 bits (132), Expect = 4e-09
 Identities = 34/190 (17%), Positives = 63/190 (33%), Gaps = 51/190 (26%)

Query: 4   ITSRNKDARLEA---------------FQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQL 48
           + +R+ D RLE                  +D+S  +SV +F   +       +    + +
Sbjct: 31  LGARSVD-RLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVL------ERFGDVDV 83

Query: 49  LINNAGILATS--SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH 106
           ++ NAG+        L+ E + +M+  N +G +   K  L  LK +     +V  +  + 
Sbjct: 84  VVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGG-LALVTTSDVSA 142

Query: 107 RNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA 166
           R +        T   K+  R+                      L R   ++    V    
Sbjct: 143 RLIPYGGGYVST---KWAARA----------------------LVRTFQIENP-DVRFFE 176

Query: 167 ADPGVVKTNI 176
             PG V T  
Sbjct: 177 LRPGAVDTYF 186

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score = 54.9 bits (133), Expect = 4e-09
 Identities = 13/104 (12%), Positives = 33/104 (31%), Gaps = 10/104 (9%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATS 59
           + I S    A+++    D+     + +  +  +             +L+ + G       
Sbjct: 49  SRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDL-------GGADILVYSTGGPRPGRF 101

Query: 60  SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
             L  E +D+        A ++ +     +       R+V + S
Sbjct: 102 MELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWG-RMVYIGS 144

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score = 54.4 bits (132), Expect = 5e-09
 Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 21/111 (18%)

Query: 4   ITSRNKDA---------RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG 54
             SR +            +E   VDL  +++  +   S+            + LL+NNA 
Sbjct: 36  AVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGP----------VDLLVNNAA 85

Query: 55  I--LATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           +  L     +T E +D+    N      +++++   L    VP  IVNV+S
Sbjct: 86  VALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSS 136

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 54.2 bits (131), Expect = 5e-09
 Identities = 10/60 (16%), Positives = 17/60 (28%), Gaps = 6/60 (10%)

Query: 49  LINNAGILATSSRL---TPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT 105
           +   AG  A  S       +  D M+  +   +    KL    LK       +    +  
Sbjct: 76  VFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG---GLLQLTGAAA 132

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score = 54.1 bits (131), Expect = 6e-09
 Identities = 22/97 (22%), Positives = 38/97 (39%), Gaps = 15/97 (15%)

Query: 15  AFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQM 70
            F  DL++ ++  +   + + ++         I +LINNAG L        +    YD +
Sbjct: 61  FFAADLATSEACQQLVDEFVAKF-------GGIDVLINNAGGLVGRKPLPEIDDTFYDAV 113

Query: 71  MSTNYIGAFFLTKLLLPLLKNSPVPS----RIVNVTS 103
           M  N       TK  LP L  +   S     +++  S
Sbjct: 114 MDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGS 150

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score = 54.1 bits (131), Expect = 7e-09
 Identities = 15/95 (15%), Positives = 32/95 (33%), Gaps = 8/95 (8%)

Query: 11  ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYD 68
             +    +DL+   +  +            +    + +L+NNAGI          P+ +D
Sbjct: 70  TDVHTVAIDLAEPDAPAELARRAA------EAFGGLDVLVNNAGISHPQPVVDTDPQLFD 123

Query: 69  QMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
             ++ N      L   +   +  +     I+ V S
Sbjct: 124 ATIAVNLRAPALLASAVGKAMVAAGEGGAIITVAS 158

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score = 54.2 bits (131), Expect = 7e-09
 Identities = 11/55 (20%), Positives = 22/55 (40%), Gaps = 3/55 (5%)

Query: 49  LINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           ++ NAGI    + L  + +      +++G        LP L +    + I+   S
Sbjct: 103 VVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSG---ASIITTGS 154

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score = 54.1 bits (131), Expect = 8e-09
 Identities = 22/128 (17%), Positives = 42/128 (32%), Gaps = 22/128 (17%)

Query: 4   ITSRNKD--------------ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLL 49
           I SR  D               ++ A Q D+     V      L        +     ++
Sbjct: 55  IASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELI------KVAGHPNIV 108

Query: 50  INNAGI--LATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR 107
           INNA    ++ + RL+P  +  +      G  F+T  +   L  +   +  +++T+    
Sbjct: 109 INNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAE 168

Query: 108 NVFNAQVN 115
                 V 
Sbjct: 169 TGSGFVVP 176

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score = 54.2 bits (131), Expect = 8e-09
 Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 12/98 (12%)

Query: 11  ARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS---RLTPEG 66
             + A   D+     V   F     ++       + + LL+NNAG          +T E 
Sbjct: 83  NIVRAVVCDVGDPDQVAALFAAVRAEF-------ARLDLLVNNAGSNVPPVPLEEVTFEQ 135

Query: 67  YDQMMSTNYIGAFFLTKLLLPL-LKNSPVPSRIVNVTS 103
           ++ +++ N  GAF  T+    +    +P   RI+N  S
Sbjct: 136 WNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGS 173

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score = 53.6 bits (130), Expect = 8e-09
 Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 21/111 (18%)

Query: 4   ITSRNKDA---------RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG 54
             +R              +E   VDL  + +  K    +            + LL+NNA 
Sbjct: 36  AVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGP----------VDLLVNNAA 85

Query: 55  I--LATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           +  +     +T E +D+  S N    F +++++   + N  VP  IVNV+S
Sbjct: 86  LVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSS 136

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 53.8 bits (130), Expect = 9e-09
 Identities = 39/200 (19%), Positives = 67/200 (33%), Gaps = 56/200 (28%)

Query: 4   ITSRNKDARLEA--------FQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI 55
           + +R  + RL+A         QVD++   +        +       ++     ++NNAG+
Sbjct: 45  LLARRVE-RLKALNLPNTLCAQVDVTDKYTFDTAITRAE------KIYGPADAIVNNAGM 97

Query: 56  --LATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSR----IVNVTSFTHRNV 109
             L          + +M   N +G     + +L  +K     +R    I+N++S      
Sbjct: 98  MLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMK-----ARNCGTIINISS------ 146

Query: 110 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP 169
                    I GK     K +P    Y  +K  +   S  +   +     R V  IA  P
Sbjct: 147 ---------IAGK-----KTFPDHAAYCGTKFAVHAISENVREEVAASNVR-VMTIA--P 189

Query: 170 GVVKTNIMREVPSFLSLMAF 189
             VKT         LS    
Sbjct: 190 SAVKTE-------LLSHTTS 202

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score = 53.7 bits (130), Expect = 1e-08
 Identities = 32/173 (18%), Positives = 53/173 (30%), Gaps = 37/173 (21%)

Query: 14  EAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS---RLTPEGYDQM 70
           E+   DLS   ++  F   +         H    +L+NNAG+         + P  +D +
Sbjct: 81  ESHACDLSHSDAIAAFATGVL------AAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDAL 134

Query: 71  MSTNYIGAFFLTKLLLPLL--KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSK 128
           ++ N    + L +   P +          I+N++S   +N                    
Sbjct: 135 IAVNLKAPYLLLRAFAPAMIAAKR---GHIINISSLAGKNPVADGAA------------- 178

Query: 129 CYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 181
            Y  A     SK  L          L       V V    PG V+T     + 
Sbjct: 179 -Y-TA-----SKWGLNGLMTSAAEELR---QHQVRVSLVAPGSVRTEFGVGLS 221

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 53.5 bits (129), Expect = 1e-08
 Identities = 8/60 (13%), Positives = 17/60 (28%), Gaps = 6/60 (10%)

Query: 49  LINNAGILATSSRL---TPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT 105
           ++  AG  A  +       +  D M   +   +   + L    LK       +    +  
Sbjct: 80  ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG---GLLTLAGAKA 136

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 53.3 bits (129), Expect = 1e-08
 Identities = 23/108 (21%), Positives = 39/108 (36%), Gaps = 17/108 (15%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS 60
            D     +        +D++    V +  +  L +          +  L+N AGIL   +
Sbjct: 37  FDQAFTQEQYPFATEVMDVADAAQVAQVCQRLLAET-------ERLDALVNAAGILRMGA 89

Query: 61  --RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSR---IVNVTS 103
             +L+ E + Q  + N  GAF L +  +          R   IV V S
Sbjct: 90  TDQLSKEDWQQTFAVNVGGAFNLFQQTMNQF----RRQRGGAIVTVAS 133

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score = 53.3 bits (129), Expect = 1e-08
 Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 13/98 (13%)

Query: 10  DARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEG 66
           D  +     D+S  ++  +  ++ ++++         I  L+NNAG+        +T E 
Sbjct: 67  DPDIHTVAGDISKPETADRIVREGIERF-------GRIDSLVNNAGVFLAKPFVEMTQED 119

Query: 67  YDQMMSTNYIGAFFLTKLLLP-LLKNSPVPSRIVNVTS 103
           YD  +  N  G F +T+     +LK       IV++T+
Sbjct: 120 YDHNLGVNVAGFFHITQRAAAEMLKQG--SGHIVSITT 155

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score = 53.3 bits (129), Expect = 1e-08
 Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 5/58 (8%)

Query: 49  LINNAGILATSS---RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           +INNA  + +       T E     +     GA  L +   P L+ S     +VNV S
Sbjct: 92  VINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEES--KGAVVNVNS 147

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score = 53.0 bits (128), Expect = 2e-08
 Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 15/97 (15%)

Query: 12  RLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYD 68
           ++     DLS  ++V     ++++Q          I +L+NNAGI   A       E +D
Sbjct: 56  KVLYDGADLSKGEAVRGLVDNAVRQM-------GRIDILVNNAGIQHTALIEDFPTEKWD 108

Query: 69  QMMSTNYIGAFFLTKLLLPLLK--NSPVPSRIVNVTS 103
            +++ N    F  T   LP +K        RI+N+ S
Sbjct: 109 AILALNLSAVFHGTAAALPHMKKQGF---GRIINIAS 142

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score = 52.9 bits (128), Expect = 2e-08
 Identities = 31/170 (18%), Positives = 60/170 (35%), Gaps = 33/170 (19%)

Query: 15  AFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMM 71
           A +VD+S    V    + + +             +++NNAG+  ++    +TPE  D++ 
Sbjct: 55  AVKVDVSDRDQVFAAVEQARKTL-------GGFDVIVNNAGVAPSTPIESITPEIVDKVY 107

Query: 72  STNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYP 131
           + N  G  +  +  +   K      +I+N  S                          Y 
Sbjct: 108 NINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAV--------------Y- 152

Query: 132 CARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 181
            +     SK  +   +    R+L       ++V    PG+VKT +  E+ 
Sbjct: 153 SS-----SKFAVRGLTQTAARDLA---PLGITVNGYCPGIVKTPMWAEID 194

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score = 53.0 bits (128), Expect = 2e-08
 Identities = 24/128 (18%), Positives = 43/128 (33%), Gaps = 23/128 (17%)

Query: 4   ITSRNKD--------------ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLL 49
           I SR+                 R     +D+ +  +V+   D              I +L
Sbjct: 56  IASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQAL------KEFGRIDIL 109

Query: 50  INNAGI--LATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR 107
           IN A    L  +  L+   +  +M  +  G F ++++L            IVN+T+    
Sbjct: 110 INCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDH-GGVIVNITATLGN 168

Query: 108 NVFNAQVN 115
                QV+
Sbjct: 169 RGQALQVH 176

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score = 52.9 bits (128), Expect = 2e-08
 Identities = 21/92 (22%), Positives = 34/92 (36%), Gaps = 10/92 (10%)

Query: 15  AFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMM 71
           A +VD++   SV    + ++              LL  NAG+  +  +  +T E +D   
Sbjct: 62  AVEVDVTKRASVDAAMQKAIDAL-------GGFDLLCANAGVSTMRPAVDITDEEWDFNF 114

Query: 72  STNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
             N  G F   ++       S     IVN  S
Sbjct: 115 DVNARGVFLANQIACRHFLASNTKGVIVNTAS 146

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score = 52.6 bits (127), Expect = 3e-08
 Identities = 14/63 (22%), Positives = 24/63 (38%), Gaps = 6/63 (9%)

Query: 49  LINNAGILATSSRL---TPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT 105
           L   AG       +   T E + Q  + N    F++T+  +PLL      + I+  +S  
Sbjct: 132 LALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKG---ASIITTSSIQ 188

Query: 106 HRN 108
              
Sbjct: 189 AYQ 191

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score = 52.3 bits (126), Expect = 4e-08
 Identities = 17/107 (15%), Positives = 38/107 (35%), Gaps = 15/107 (14%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS 60
            D  +      +     D++    +         ++           +L+NNAG+     
Sbjct: 67  TDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRF-------GGADILVNNAGVQFVEK 119

Query: 61  --RLTPEGYDQMMSTNYIGAFFLTKLLLPLLK--NSPVPSRIVNVTS 103
                 E +D++++ N   +F   +  +P +K        RI+N+ S
Sbjct: 120 IEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGW---GRIINIAS 163

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score = 51.8 bits (125), Expect = 4e-08
 Identities = 19/96 (19%), Positives = 42/96 (43%), Gaps = 13/96 (13%)

Query: 11  ARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGY 67
           A   A   D+S  ++V   F ++L+++         +  + + AG+   A S  L  E +
Sbjct: 52  AEAIAVVADVSDPKAVEAVFAEALEEF-------GRLHGVAHFAGVAHSALSWNLPLEAW 104

Query: 68  DQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           ++++  N  G+F + +    +L+       +V   S
Sbjct: 105 EKVLRVNLTGSFLVARKAGEVLEEG---GSLVLTGS 137

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score = 51.9 bits (125), Expect = 5e-08
 Identities = 22/100 (22%), Positives = 44/100 (44%), Gaps = 10/100 (10%)

Query: 7   RNKDARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLT 63
             +  R+ A Q D+    S+     ++L ++         I +L++N GI        LT
Sbjct: 103 EEQGRRIIARQADVRDLASLQAVVDEALAEF-------GHIDILVSNVGISNQGEVVSLT 155

Query: 64  PEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
            + +  ++ TN IGA+   + +LP +        ++ V+S
Sbjct: 156 DQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSS 195

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score = 51.5 bits (124), Expect = 6e-08
 Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 12/94 (12%)

Query: 15  AFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS---RLTPEGYDQM 70
               D++   SV   F  +++++         + +L NNAG  A +     LT   + Q+
Sbjct: 78  CVPTDVTDPDSVRALFTATVEKF-------GRVDVLFNNAGTGAPAIPMEDLTFAQWKQV 130

Query: 71  MSTNYIGAFFLTKLLLPLLKNSPVPS-RIVNVTS 103
           + TN  G F  T+    ++K       RI+N  S
Sbjct: 131 VDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGS 164

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score = 51.4 bits (124), Expect = 7e-08
 Identities = 32/171 (18%), Positives = 52/171 (30%), Gaps = 33/171 (19%)

Query: 14  EAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMM 71
              Q D+S                   +    I ++  NAG+   A  + +TPE  + + 
Sbjct: 63  IGVQTDVSDRAQCDALAGRAV------EEFGGIDVVCANAGVFPDAPLATMTPEQLNGIF 116

Query: 72  STNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-QVNNETITGKFFLRSKCY 130
           + N  G F+  +  L  L  S    R+V  +S T          +               
Sbjct: 117 AVNVNGTFYAVQACLDALIASGS-GRVVLTSSITGPITGYPGWSH--------------- 160

Query: 131 PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 181
                Y  +K   L F       L       ++V A  PG + T  + E  
Sbjct: 161 -----YGATKAAQLGFMRTAAIELA---PHKITVNAIMPGNIMTEGLLENG 203

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score = 50.9 bits (123), Expect = 7e-08
 Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 2/57 (3%)

Query: 49  LINNAGILATSS--RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           L+NNAGI    S    T   + ++++ N  G FF T+L +  +KN  + + I+N++S
Sbjct: 86  LVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSS 142

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score = 51.0 bits (123), Expect = 7e-08
 Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 8/95 (8%)

Query: 11  ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYD 68
            R+EA   D++S ++V    D+L    ++      + +L+NNAG+        +T E +D
Sbjct: 73  GRVEAVVCDVTSTEAV----DALITQTVEK--AGRLDVLVNNAGLGGQTPVVDMTDEEWD 126

Query: 69  QMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           ++++         T+  L   +       IVN  S
Sbjct: 127 RVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNAS 161

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score = 50.6 bits (122), Expect = 8e-08
 Identities = 41/203 (20%), Positives = 72/203 (35%), Gaps = 57/203 (28%)

Query: 4   ITSRNKDARLEA--------------FQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLL 49
           I +R  + +L A               ++D++  Q V     S        +    + +L
Sbjct: 36  IAARRVE-KLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTV------EALGGLDIL 88

Query: 50  INNAGI--LATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP-LLKNSPVPSRIVNVTSFTH 106
           +NNAGI  L          + +M+ TN +G  ++T+  LP LL++      +V ++S   
Sbjct: 89  VNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK---GTVVQMSS--- 142

Query: 107 RNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA 166
                       I G+          A +Y+ +K  +  FS  L + +     R V VI 
Sbjct: 143 ------------IAGR-----VNVRNAAVYQATKFGVNAFSETLRQEVTERGVR-VVVIE 184

Query: 167 ADPGVVKTNIMREVPSFLSLMAF 189
             PG   T            +  
Sbjct: 185 --PGTTDTE-------LRGHITH 198

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score = 50.6 bits (122), Expect = 1e-07
 Identities = 14/95 (14%), Positives = 27/95 (28%), Gaps = 14/95 (14%)

Query: 14  EAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI---LATSSRLTPEGYDQ 69
              Q+   S Q   +  +     +         + +L++N           +   E Y  
Sbjct: 47  TYPQLKPMSEQEPAELIEAVTSAY-------GQVDVLVSNDIFAPEFQPIDKYAVEDYRG 99

Query: 70  MMSTNYIGAFFLTKLLLPL-LKNSPVPSRIVNVTS 103
            +    I  F L   +     K       I+ +TS
Sbjct: 100 AVEALQIRPFALVNAVASQMKKRK--SGHIIFITS 132

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score = 50.7 bits (122), Expect = 1e-07
 Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 15/98 (15%)

Query: 11  ARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGY 67
            +      DLS    +   F  + +++         + +L+NNAGI  +A   +   E +
Sbjct: 51  VKAVHHPADLSDVAQIEALFALAEREF-------GGVDILVNNAGIQHVAPVEQFPLESW 103

Query: 68  DQMMSTNYIGAFFLTKLLLPLLK--NSPVPSRIVNVTS 103
           D++++ N    F  T+L LP ++  N     RI+N+ S
Sbjct: 104 DKIIALNLSAVFHGTRLALPGMRARNW---GRIINIAS 138

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score = 50.6 bits (122), Expect = 1e-07
 Identities = 13/57 (22%), Positives = 25/57 (43%), Gaps = 2/57 (3%)

Query: 49  LINNAGILATSS--RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           ++ NAG+ A  +   +TPE +  +M  N  G +       P +        I+ ++S
Sbjct: 105 IVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISS 161

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 50.6 bits (122), Expect = 1e-07
 Identities = 22/105 (20%), Positives = 45/105 (42%), Gaps = 17/105 (16%)

Query: 5   TSRNKDARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATS 59
            S        A + D++  + V + +K+  +           +++LI NAG+    L   
Sbjct: 53  RSGEPPEGFLAVKCDITDTEQVEQAYKEIEETH-------GPVEVLIANAGVTKDQLLM- 104

Query: 60  SRLTPEGYDQMMSTNYIGAFFLTKLLL-PLLKNSPVPSRIVNVTS 103
            R++ E +  ++ TN  G F + K     +L+      R+V ++S
Sbjct: 105 -RMSEEDFTSVVETNLTGTFRVVKRANRAMLRAK--KGRVVLISS 146

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score = 50.6 bits (122), Expect = 1e-07
 Identities = 17/92 (18%), Positives = 39/92 (42%), Gaps = 10/92 (10%)

Query: 15  AFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMM 71
           A Q+D++   S+      +++           + +L+NNA +   +    +T E Y+++ 
Sbjct: 58  AVQMDVTRQDSIDAAIAATVEHA-------GGLDILVNNAALFDLAPIVEITRESYEKLF 110

Query: 72  STNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           + N  G  F  +     +       +I+N+ S
Sbjct: 111 AINVAGTLFTLQAAARQMIAQGRGGKIINMAS 142

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score = 50.7 bits (122), Expect = 1e-07
 Identities = 17/111 (15%), Positives = 32/111 (28%), Gaps = 29/111 (26%)

Query: 15  AFQVDLSSFQSVLK-----FKDSLQQWLLDSDMHSSIQLLINNAGI------------LA 57
             Q DL++   +            + +           +L+NNA                
Sbjct: 78  VCQADLTNSNVLPASCEEIINSCFRAF-------GRCDVLVNNASAFYPTPLVQGDHEDN 130

Query: 58  TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPS-----RIVNVTS 103
           ++ +       +++ TN I  F LT       K +          IVN+  
Sbjct: 131 SNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCD 181

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score = 50.6 bits (122), Expect = 1e-07
 Identities = 14/95 (14%), Positives = 33/95 (34%), Gaps = 10/95 (10%)

Query: 12  RLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYD 68
           +    + D++    V         +          I + + NAGI++  +   +  E + 
Sbjct: 82  KALPIRCDVTQPDQVRGMLDQMTGEL-------GGIDIAVCNAGIVSVQAMLDMPLEEFQ 134

Query: 69  QMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           ++  TN  G F   +     + +  +   I+   S
Sbjct: 135 RIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTAS 169

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score = 50.3 bits (121), Expect = 1e-07
 Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 49  LINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           ++ NAGI         +G+  ++  N  G +   K+ +P L        IV ++S
Sbjct: 106 VVANAGI--APMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISS 158

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score = 50.2 bits (121), Expect = 1e-07
 Identities = 15/117 (12%), Positives = 42/117 (35%), Gaps = 25/117 (21%)

Query: 4   ITSRNKDA-------------RLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLL 49
           ++SR ++               +      +   +   +    ++         H  + +L
Sbjct: 43  VSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNL-------HGGVDIL 95

Query: 50  INNAGI---LATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           ++NA +          T E +D+++  N      +TK ++P ++       ++ V+S
Sbjct: 96  VSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRG-GGSVLIVSS 151

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score = 50.2 bits (121), Expect = 1e-07
 Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 13/93 (13%)

Query: 15  AFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMM 71
             + D+S    V    K  +  +           +L+NNAGI        LT E + +  
Sbjct: 58  TVKCDVSQPGDVEAFGKQVISTF-------GRCDILVNNAGIYPLIPFDELTFEQWKKTF 110

Query: 72  STNYIGAFFLTKLLLPL-LKNSPVPSRIVNVTS 103
             N    F + K  +P   +N     RI+N+TS
Sbjct: 111 EINVDSGFLMAKAFVPGMKRNG--WGRIINLTS 141

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 49.8 bits (120), Expect = 2e-07
 Identities = 18/94 (19%), Positives = 37/94 (39%), Gaps = 14/94 (14%)

Query: 15  AFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQ 69
           A   D+S   SV   F +              I +L+NNA I          +  + + +
Sbjct: 56  AIAADISDPGSVKALFAEIQALT-------GGIDILVNNASIVPFVAWD--DVDLDHWRK 106

Query: 70  MMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           ++  N  G F +T+     ++ +    R++++ S
Sbjct: 107 IIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIAS 140

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score = 49.9 bits (120), Expect = 2e-07
 Identities = 18/105 (17%), Positives = 42/105 (40%), Gaps = 16/105 (15%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS 60
           A +  + +  +    Q D++  Q +   F+  +  +         + +L+NNAG+     
Sbjct: 49  AALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF-------GRLDILVNNAGVN---- 97

Query: 61  RLTPEGYDQMMSTNYIGAFFLTKLLLPLLK--NSPVPSRIVNVTS 103
               + +++ +  N +     T L L  +   N      I+N++S
Sbjct: 98  --NEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSS 140

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score = 49.9 bits (120), Expect = 2e-07
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 2/57 (3%)

Query: 49  LINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           ++ NAG+L       LT E +D ++  N  G +   +  +P +  +     IV V+S
Sbjct: 109 VVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSS 165

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 49.8 bits (120), Expect = 2e-07
 Identities = 19/105 (18%), Positives = 45/105 (42%), Gaps = 17/105 (16%)

Query: 5   TSRNKDARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATS 59
                   L   +VD++   +V + F    +           +++L++NAG+        
Sbjct: 47  RGSGAPKGLFGVEVDVTDSDAVDRAFTAVEEHQ-------GPVEVLVSNAGLSADAFLM- 98

Query: 60  SRLTPEGYDQMMSTNYIGAFFLTKLLL-PLLKNSPVPSRIVNVTS 103
            R+T E ++++++ N  GAF + +     + +N     R++ + S
Sbjct: 99  -RMTEEKFEKVINANLTGAFRVAQRASRSMQRNK--FGRMIFIGS 140

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score = 49.9 bits (120), Expect = 2e-07
 Identities = 24/97 (24%), Positives = 36/97 (37%), Gaps = 14/97 (14%)

Query: 12  RLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEG 66
           + +A+Q D+S+   V K  +               I  LI NAG+     AT   LT E 
Sbjct: 65  KTKAYQCDVSNTDIVTKTIQQIDADL-------GPISGLIANAGVSVVKPAT--ELTHED 115

Query: 67  YDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           +  +   N  G F   + +  L         IV  +S
Sbjct: 116 FAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSS 152

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score = 49.9 bits (120), Expect = 2e-07
 Identities = 18/109 (16%), Positives = 39/109 (35%), Gaps = 18/109 (16%)

Query: 14  EAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYD 68
              ++D+S   S     +  +  +        ++ ++  NAGI          +TPE   
Sbjct: 94  IGVRLDVSDPGSCADAARTVVDAF-------GALDVVCANAGIFPEARLD--TMTPEQLS 144

Query: 69  QMMSTNYIGAFFLTKLLL-PLLKNSPVPSRIVNVTSFTHRNVFNA-QVN 115
           +++  N  G  +  +  L PL  +     R++  +S T          +
Sbjct: 145 EVLDVNVKGTVYTVQACLAPLTASG--RGRVILTSSITGPVTGYPGWSH 191

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score = 49.4 bits (119), Expect = 2e-07
 Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 18/109 (16%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS 60
             I +    A   +  VD+S  +S       +L ++         I  L+NNA I     
Sbjct: 51  KQIVADGGTAI--SVAVDVSDPESAKAMADRTLAEF-------GGIDYLVNNAAIFGGMK 101

Query: 61  -----RLTPEGYDQMMSTNYIGAFFLTKLLLP-LLKNSPVPSRIVNVTS 103
                 + PE Y + MS N  GA + T+ +   + K       IVN +S
Sbjct: 102 LDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRG--GGAIVNQSS 148

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 49.1 bits (118), Expect = 3e-07
 Identities = 17/95 (17%), Positives = 41/95 (43%), Gaps = 13/95 (13%)

Query: 14  EAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYD 68
            AFQ D+S  ++     +     +           ++++ AGI          ++ + +D
Sbjct: 66  AAFQADVSEARAARCLLEQVQACFSRPPS------VVVSCAGITQDEFLL--HMSEDDWD 117

Query: 69  QMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           ++++ N  G F +T+     L ++     I+N++S
Sbjct: 118 KVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISS 152

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 50.0 bits (120), Expect = 3e-07
 Identities = 19/97 (19%), Positives = 43/97 (44%), Gaps = 18/97 (18%)

Query: 14  EAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI-----LATSSRLTPEGYD 68
            A  +D+++  +V K    + +          + +L+NNAGI     LA    +  + +D
Sbjct: 262 TALTLDVTADDAVDKITAHVTE-----HHGGKVDILVNNAGITRDKLLA---NMDEKRWD 313

Query: 69  QMMSTNYIGAFFLTKLLLP--LLKNSPVPSRIVNVTS 103
            +++ N +    LT+ L+    +       R++ ++S
Sbjct: 314 AVIAVNLLAPQRLTEGLVGNGTIGEGG---RVIGLSS 347

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score = 49.1 bits (118), Expect = 3e-07
 Identities = 21/106 (19%), Positives = 43/106 (40%), Gaps = 17/106 (16%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS- 60
            +I ++  DA L+    DL + Q     +D ++++         + +LINN GI      
Sbjct: 52  KEIRAQYPDAILQPVVADLGTEQGC---QDVIEKY-------PKVDILINNLGIFEPVEY 101

Query: 61  -RLTPEGYDQMMSTNYIGAFFLTKLLLPLLK--NSPVPSRIVNVTS 103
             +  E + ++   N +    LT+  L  +         R++ + S
Sbjct: 102 FDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKE---GRVIFIAS 144

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score = 49.1 bits (118), Expect = 4e-07
 Identities = 22/106 (20%), Positives = 48/106 (45%), Gaps = 14/106 (13%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGILATS 59
             I     +A+ +  + D+++   V        +  +D     + SI +L+NNAGI +  
Sbjct: 38  LSI-HDPGEAKYDHIECDVTNPDQV--------KASIDHIFKEYGSISVLVNNAGIESYG 88

Query: 60  S--RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
               ++   + +++  N  G ++ +K  +P +  S     IVN++S
Sbjct: 89  KIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSR-DPSIVNISS 133

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 49.1 bits (118), Expect = 4e-07
 Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 6/62 (9%)

Query: 45  SIQLLINNAGILATS---SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNV 101
           S+ +L+NN            +T E  ++    N    F +TK  L  LK       I+N 
Sbjct: 125 SLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQG---DVIINT 181

Query: 102 TS 103
            S
Sbjct: 182 AS 183

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 48.6 bits (117), Expect = 4e-07
 Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 17/96 (17%)

Query: 14  EAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYD 68
             F  D+S    V    K ++  W        +I +++NNAGI    L    R+    +D
Sbjct: 54  ITFGGDVSKEADVEAMMKTAIDAW-------GTIDVVVNNAGITRDTLLI--RMKKSQWD 104

Query: 69  QMMSTNYIGAFFLTKLLL-PLLKNSPVPSRIVNVTS 103
           +++  N  G F  T+     ++K      RI+N+ S
Sbjct: 105 EVIDLNLTGVFLCTQAATKIMMKKR--KGRIINIAS 138

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score = 48.7 bits (117), Expect = 4e-07
 Identities = 18/97 (18%), Positives = 36/97 (37%), Gaps = 13/97 (13%)

Query: 11  ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYD 68
            R+    VD+++ + V    +S++             +L+NNAG     T      E + 
Sbjct: 57  VRVLEVAVDVATPEGVDAVVESVR------SSFGGADILVNNAGTGSNETIMEAADEKWQ 110

Query: 69  QMMSTNYIGAFFLTKLLLPLLK--NSPVPSRIVNVTS 103
                  + A  L + L+P ++         I++  S
Sbjct: 111 FYWELLVMAAVRLARGLVPGMRARGG---GAIIHNAS 144

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score = 48.6 bits (117), Expect = 4e-07
 Identities = 21/105 (20%), Positives = 40/105 (38%), Gaps = 14/105 (13%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL-ATS 59
            +I      A   A + D++S Q +      ++ +          + +L+NNAG      
Sbjct: 53  DEIQQLGGQA--FACRCDITSEQELSALADFAISKL-------GKVDILVNNAGGGGPKP 103

Query: 60  SRLTPEGYDQMMSTNYIGAFFLTKLLLPL-LKNSPVPSRIVNVTS 103
             +    + +    N    F L++L+ P   KN      I+ +TS
Sbjct: 104 FDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG--GGVILTITS 146

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 48.7 bits (117), Expect = 5e-07
 Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 17/96 (17%)

Query: 14  EAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYD 68
            A + D+S    V   F   +++W         + +L+NNAGI    L    R+  + + 
Sbjct: 81  FAVKADVSQESEVEALFAAVIERW-------GRLDVLVNNAGITRDTLLL--RMKRDDWQ 131

Query: 69  QMMSTNYIGAFFLTKLLL-PLLKNSPVPSRIVNVTS 103
            ++  N  G F  ++     +LK      RI+N+ S
Sbjct: 132 SVLDLNLGGVFLCSRAAAKIMLKQR--SGRIINIAS 165

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score = 48.8 bits (117), Expect = 5e-07
 Identities = 13/58 (22%), Positives = 27/58 (46%), Gaps = 3/58 (5%)

Query: 49  LINNAGILATSSRL---TPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           ++ NA + +  +RL    P+ +  M+  N  GA+   ++ +P +        IV  +S
Sbjct: 121 VLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSS 178

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 48.2 bits (116), Expect = 5e-07
 Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 17/96 (17%)

Query: 14  EAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYD 68
              + D+ + + V    K ++  +         I +L+NNAGI    L    +++ + +D
Sbjct: 58  VVAKGDVKNPEDVENMVKTAMDAF-------GRIDILVNNAGITRDTLML--KMSEKDWD 108

Query: 69  QMMSTNYIGAFFLTKLLL-PLLKNSPVPSRIVNVTS 103
            +++TN   A+  TK +   +LK      +I+N+TS
Sbjct: 109 DVLNTNLKSAYLCTKAVSKIMLKQK--SGKIINITS 142

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 48.2 bits (116), Expect = 6e-07
 Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 17/96 (17%)

Query: 14  EAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYD 68
            A + D+++ + V    K ++  +         + +L+NNAG+    L    R+  E +D
Sbjct: 57  IAVRADVANAEDVTNMVKQTVDVF-------GQVDILVNNAGVTKDNLLM--RMKEEEWD 107

Query: 69  QMMSTNYIGAFFLTKLLL-PLLKNSPVPSRIVNVTS 103
            +++TN  G F  TK +   +++      RIVN+ S
Sbjct: 108 TVINTNLKGVFLCTKAVSRFMMRQR--HGRIVNIAS 141

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score = 48.7 bits (117), Expect = 6e-07
 Identities = 12/58 (20%), Positives = 24/58 (41%), Gaps = 3/58 (5%)

Query: 49  LINNAGILATSS---RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           ++ NAGI        + + E + +M+  N  G +   K  +P +        I+  +S
Sbjct: 108 IVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSS 165

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score = 48.3 bits (116), Expect = 7e-07
 Identities = 20/105 (19%), Positives = 50/105 (47%), Gaps = 11/105 (10%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS 60
             +  ++     + F++D+++ + V +  + + +++         I +L+NNAGI   S 
Sbjct: 44  VSLDEKSDVNVSDHFKIDVTNEEEVKEAVEKTTKKY-------GRIDILVNNAGIEQYSP 96

Query: 61  --RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
                 E + +++  N  G++ + K  +P++      S I+N+ S
Sbjct: 97  LHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGS-IINIAS 140

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 48.2 bits (116), Expect = 7e-07
 Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 17/96 (17%)

Query: 14  EAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYD 68
            A Q +++    V    K+ + Q+        S+ +L+NNAGI    L    R+  + +D
Sbjct: 57  FAIQANVADADEVKAMIKEVVSQF-------GSLDVLVNNAGITRDNLLM--RMKEQEWD 107

Query: 69  QMMSTNYIGAFFLTKLLL-PLLKNSPVPSRIVNVTS 103
            ++ TN  G F   +     +L+       I+N++S
Sbjct: 108 DVIDTNLKGVFNCIQKATPQMLRQR--SGAIINLSS 141

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score = 48.3 bits (116), Expect = 7e-07
 Identities = 20/96 (20%), Positives = 45/96 (46%), Gaps = 17/96 (17%)

Query: 14  EAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYD 68
             +  D+S  + + +     L +         ++ +L+NNAGI    L    R+  + ++
Sbjct: 96  SGYAGDVSKKEEISEVINKILTEH-------KNVDILVNNAGITRDNLFL--RMKNDEWE 146

Query: 69  QMMSTNYIGAFFLTKLLL-PLLKNSPVPSRIVNVTS 103
            ++ TN    F++T+ +   ++ N     RI+N++S
Sbjct: 147 DVLRTNLNSLFYITQPISKRMINNR--YGRIINISS 180

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score = 48.3 bits (116), Expect = 7e-07
 Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 5/59 (8%)

Query: 49  LINNAGILATSSRL---TPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF 104
           ++NNAG      R    + +G+ Q++  N +G + LTKL LP L+ S     ++N++S 
Sbjct: 86  VVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS--QGNVINISSL 142

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score = 47.9 bits (115), Expect = 8e-07
 Identities = 21/94 (22%), Positives = 37/94 (39%), Gaps = 13/94 (13%)

Query: 14  EAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQM 70
             FQVDL   +  ++  +++             + +L+NNA I A  S   +    + ++
Sbjct: 52  AFFQVDLEDERERVRFVEEAAYAL-------GRVDVLVNNAAIAAPGSALTVRLPEWRRV 104

Query: 71  MSTNYIGAFFLTKLLLP-LLKNSPVPSRIVNVTS 103
           +  N      L+ L    + K       IVNV S
Sbjct: 105 LEVNLTAPMHLSALAAREMRKVG--GGAIVNVAS 136

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score = 47.9 bits (115), Expect = 8e-07
 Identities = 17/96 (17%), Positives = 31/96 (32%), Gaps = 11/96 (11%)

Query: 11  ARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGY 67
           A       DL                          + +++NNAG+++       T   +
Sbjct: 66  AADLHLPGDLREAAYADGLPGAVAAGL-------GRLDIVVNNAGVISRGRITETTDADW 118

Query: 68  DQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
              +  N    F + +  +PL+  +     IVNV S
Sbjct: 119 SLSLGVNVEAPFRICRAAIPLMAAAGG-GAIVNVAS 153

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score = 47.9 bits (115), Expect = 8e-07
 Identities = 23/108 (21%), Positives = 51/108 (47%), Gaps = 16/108 (14%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI---LA 57
            ++    K+      + D+S  + V +  + + + +       S I +L NNAGI   + 
Sbjct: 49  QELRGMGKEV--LGVKADVSKKKDVEEFVRRTFETY-------SRIDVLCNNAGIMDGVT 99

Query: 58  TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP-LLKNSPVPSRIVNVTSF 104
             + ++ E ++++++ N   AF+ ++ ++P +LK       IVN  S 
Sbjct: 100 PVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQG--KGVIVNTASI 145

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score = 47.9 bits (115), Expect = 9e-07
 Identities = 22/101 (21%), Positives = 40/101 (39%), Gaps = 13/101 (12%)

Query: 7   RNKDARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLT 63
                R  + +VD+    ++     ++             I + I NAGI   A    + 
Sbjct: 67  EKTGRRCISAKVDVKDRAALESFVAEAEDTL-------GGIDIAITNAGISTIALLPEVE 119

Query: 64  PEGYDQMMSTNYIGAFFLTKLLLP-LLKNSPVPSRIVNVTS 103
              +D+++ TN  G F     + P ++K +    RIV V+S
Sbjct: 120 SAQWDEVIGTNLTGTFNTIAAVAPGMIKRN--YGRIVTVSS 158

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score = 47.9 bits (115), Expect = 9e-07
 Identities = 21/104 (20%), Positives = 40/104 (38%), Gaps = 10/104 (9%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATS 59
             +T +  DA       D++   ++      L            + +LINNAGI      
Sbjct: 51  DTLTRKGYDA--HGVAFDVTDELAIEAAFSKLD------AEGIHVDILINNAGIQYRKPM 102

Query: 60  SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
             L  E + +++ TN   AF +++     +       +I+N+ S
Sbjct: 103 VELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGS 146

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 47.9 bits (115), Expect = 9e-07
 Identities = 25/96 (26%), Positives = 50/96 (52%), Gaps = 17/96 (17%)

Query: 14  EAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYD 68
               ++++   +V    + +L+++        ++ +L+NNAGI    LA   R+  + +D
Sbjct: 80  RGAVLNVNDATAVDALVESTLKEF-------GALNVLVNNAGITQDQLAM--RMKDDEWD 130

Query: 69  QMMSTNYIGAFFLTKLLL-PLLKNSPVPSRIVNVTS 103
            ++ TN    F L++ +L P++K      RIVN+TS
Sbjct: 131 AVIDTNLKAVFRLSRAVLRPMMKAR--GGRIVNITS 164

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 47.9 bits (115), Expect = 9e-07
 Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 15/98 (15%)

Query: 11  ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEG 66
             +  F  +LS  +S+ +  +  +           I +L+NNAGI    L    R+  + 
Sbjct: 73  KDVFVFSANLSDRKSIKQLAEVAE------REMEGIDILVNNAGITRDGLFV--RMQDQD 124

Query: 67  YDQMMSTNYIGAFFLTKLLL-PLLKNSPVPSRIVNVTS 103
           +D +++ N   A  LT+ L+  +++      RI+N+TS
Sbjct: 125 WDDVLAVNLTAASTLTRELIHSMMRRR--YGRIINITS 160

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score = 47.6 bits (114), Expect = 1e-06
 Identities = 21/95 (22%), Positives = 40/95 (42%), Gaps = 14/95 (14%)

Query: 15  AFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS---RLTPEGYDQM 70
           A + D+S    +    +D + ++         + +++ NAGI    +    L P  +D+ 
Sbjct: 81  ALEADVSDELQMRNAVRDLVLKF-------GHLDIVVANAGINGVWAPIDDLKPFEWDET 133

Query: 71  MSTNYIGAFFLTKLLLP-LLKNSPVPSRIVNVTSF 104
           ++ N  G F    L +P L +       IV V+S 
Sbjct: 134 IAVNLRGTFLTLHLTVPYLKQRG--GGAIVVVSSI 166

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 47.7 bits (114), Expect = 1e-06
 Identities = 28/152 (18%), Positives = 48/152 (31%), Gaps = 23/152 (15%)

Query: 40  SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIV 99
           +     +  L+  AG+   +  L       ++S NY GA  L    LP LK    P+  V
Sbjct: 57  AKCSKGMDGLVLCAGLGPQTKVL-----GNVVSVNYFGATELMDAFLPALKKGHQPA-AV 110

Query: 100 NVTS--------FTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELH 151
            ++S          +      +   E         +        Y  SK  L +      
Sbjct: 111 VISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAV---- 166

Query: 152 RNLGLDKSRH---VSVIAADPGVVKTNIMREV 180
           R            ++ IA  PG  +T +++  
Sbjct: 167 RKRAAAWGEAGVRLNTIA--PGATETPLLQAG 196

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 47.6 bits (114), Expect = 1e-06
 Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 11/93 (11%)

Query: 14  EAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMM 71
           +A+ VD++ F+S  +  + +            + +LINNAGI   AT  ++T   +D +M
Sbjct: 78  KAYAVDVADFESCERCAEKVL------ADFGKVDVLINNAGITRDATFMKMTKGDWDAVM 131

Query: 72  STNYIGAFFLTKLLL-PLLKNSPVPSRIVNVTS 103
            T+    F +TK  +  +++      RIVN+ S
Sbjct: 132 RTDLDAMFNVTKQFIAGMVERR--FGRIVNIGS 162

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 47.6 bits (114), Expect = 1e-06
 Identities = 20/99 (20%), Positives = 38/99 (38%), Gaps = 15/99 (15%)

Query: 11  ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYD 68
             ++    D++S   V     +        +    I +L+N+AG      ++ L    + 
Sbjct: 73  HDVDGSSCDVTSTDEVHAAVAAAV------ERFGPIGILVNSAGRNGGGETADLDDALWA 126

Query: 69  QMMSTNYIGAFFLTKLLLPLL----KNSPVPSRIVNVTS 103
            ++ TN  G F +T+ +L              RIVN+ S
Sbjct: 127 DVLDTNLTGVFRVTREVLRAGGMREAGW---GRIVNIAS 162

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 47.1 bits (113), Expect = 1e-06
 Identities = 21/93 (22%), Positives = 44/93 (47%), Gaps = 11/93 (11%)

Query: 14  EAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMM 71
            A + ++  + S  +  D ++           I +L+NNAGI       ++T E +  ++
Sbjct: 66  YASEGNVGDWDSTKQAFDKVK------AEVGEIDVLVNNAGITRDVVFRKMTREDWQAVI 119

Query: 72  STNYIGAFFLTKLLL-PLLKNSPVPSRIVNVTS 103
            TN    F +TK ++  +++      RI+N++S
Sbjct: 120 DTNLTSLFNVTKQVIDGMVERG--WGRIINISS 150

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 47.1 bits (113), Expect = 1e-06
 Identities = 20/95 (21%), Positives = 46/95 (48%), Gaps = 15/95 (15%)

Query: 14  EAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQ 69
               +++S  +S+  F   ++        + +I +L+NNAGI    L    R++ + +  
Sbjct: 57  RGLVLNISDIESIQNFFAEIK------AENLAIDILVNNAGITRDNLMM--RMSEDEWQS 108

Query: 70  MMSTNYIGAFFLTKLLL-PLLKNSPVPSRIVNVTS 103
           +++TN    F ++K  +  ++K      RI+++ S
Sbjct: 109 VINTNLSSIFRMSKECVRGMMKKR--WGRIISIGS 141

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 47.1 bits (113), Expect = 2e-06
 Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 15/95 (15%)

Query: 14  EAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQ 69
              +++L S +S+ K  + +       ++   I +L+NNAGI    L    R++   +++
Sbjct: 60  HGVEMNLLSEESINKAFEEIY------NLVDGIDILVNNAGITRDKLFL--RMSLLDWEE 111

Query: 70  MMSTNYIGAFFLTKLLL-PLLKNSPVPSRIVNVTS 103
           ++  N  G F +T+  L  ++K      RIVN++S
Sbjct: 112 VLKVNLTGTFLVTQNSLRKMIKQR--WGRIVNISS 144

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score = 47.2 bits (113), Expect = 2e-06
 Identities = 20/100 (20%), Positives = 42/100 (42%), Gaps = 12/100 (12%)

Query: 7   RNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTP 64
            +     EA   DL+  +      + L            + +L+NNAGI+  A +  ++ 
Sbjct: 75  ADGGGSAEAVVADLADLEGAANVAEELAA-------TRRVDVLVNNAGIIARAPAEEVSL 127

Query: 65  EGYDQMMSTNYIGAFFLTKLLLP-LLKNSPVPSRIVNVTS 103
             + ++++ N   A+ L++     +L +     RIV + S
Sbjct: 128 GRWREVLTVNLDAAWVLSRSFGTAMLAHG--SGRIVTIAS 165

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 47.2 bits (113), Expect = 2e-06
 Identities = 21/100 (21%), Positives = 41/100 (41%), Gaps = 17/100 (17%)

Query: 11  ARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGY 67
              +    D+ S   +       ++++         + +L+NNAG      ++ L  E +
Sbjct: 71  VEADGRTCDVRSVPEIEALVAAVVERY-------GPVDVLVNNAGRPGGGATAELADELW 123

Query: 68  DQMMSTNYIGAFFLTKLLLPLL----KNSPVPSRIVNVTS 103
             ++ TN  G F +TK +L       + +    RIVN+ S
Sbjct: 124 LDVVETNLTGVFRVTKQVLKAGGMLERGT---GRIVNIAS 160

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 47.1 bits (113), Expect = 2e-06
 Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 15/95 (15%)

Query: 14  EAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQ 69
           +   +++++ +S+     ++       D    + +L+NNAGI    L    R+  E +  
Sbjct: 58  KGMALNVTNPESIEAVLKAIT------DEFGGVDILVNNAGITRDNLLM--RMKEEEWSD 109

Query: 70  MMSTNYIGAFFLTKLLL-PLLKNSPVPSRIVNVTS 103
           +M TN    F L+K +L  ++K      RI+NV S
Sbjct: 110 IMETNLTSIFRLSKAVLRGMMKKR--QGRIINVGS 142

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 46.7 bits (112), Expect = 2e-06
 Identities = 21/108 (19%), Positives = 40/108 (37%), Gaps = 18/108 (16%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----L 56
            +   R     +     +L   ++       + +           +  L+NNAGI    L
Sbjct: 44  EEARRRGSPL-VAVLGANLLEAEAATALVHQAAEVL-------GGLDTLVNNAGITRDTL 95

Query: 57  ATSSRLTPEGYDQMMSTNYIGAFFLTKLLL-PLLKNSPVPSRIVNVTS 103
               R+  E ++ ++  N    F  T+  +  ++K      RIVN+TS
Sbjct: 96  LV--RMKDEDWEAVLEANLSAVFRTTREAVKLMMKAR--FGRIVNITS 139

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 46.7 bits (112), Expect = 2e-06
 Identities = 17/94 (18%), Positives = 38/94 (40%), Gaps = 13/94 (13%)

Query: 14  EAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQM 70
               +D++   SV + F ++L            +  +++ AGI       ++  E ++ +
Sbjct: 52  HPVVMDVADPASVERGFAEALAHL-------GRLDGVVHYAGITRDNFHWKMPLEDWELV 104

Query: 71  MSTNYIGAFFLTKLLL-PLLKNSPVPSRIVNVTS 103
           +  N  G+F + K     + + +  P  IV   S
Sbjct: 105 LRVNLTGSFLVAKAASEAMREKN--PGSIVLTAS 136

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score = 46.8 bits (112), Expect = 2e-06
 Identities = 21/107 (19%), Positives = 38/107 (35%), Gaps = 15/107 (14%)

Query: 15  AFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMM 71
           A++  + S++S  K  KD +  +         I   I NAG  A S     + E ++ ++
Sbjct: 77  AYKCQVDSYESCEKLVKDVVADF-------GQIDAFIANAGATADSGILDGSVEAWNHVV 129

Query: 72  STNYIGAFFLTKLLL-PLLKNSPVPSRIVNVTSF--THRNVFNAQVN 115
             +  G F   K +     +       +V   S      N    Q +
Sbjct: 130 QVDLNGTFHCAKAVGHHFKERG--TGSLVITASMSGHIANFPQEQTS 174

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score = 46.4 bits (111), Expect = 3e-06
 Identities = 22/109 (20%), Positives = 39/109 (35%), Gaps = 16/109 (14%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGILATS 59
           A +     DA +     D+S    V        +  + +  +    I    NNAGI    
Sbjct: 55  AAVLETAPDAEVLTTVADVSDEAQV--------EAYVTATTERFGRIDGFFNNAGIEGKQ 106

Query: 60  SRL---TPEGYDQMMSTNYIGAFFLTKLLLP-LLKNSPVPSRIVNVTSF 104
           +     T   +D+++S N  G F   + +L  + +       +VN  S 
Sbjct: 107 NPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG--SGMVVNTASV 153

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 46.6 bits (111), Expect = 3e-06
 Identities = 36/173 (20%), Positives = 61/173 (35%), Gaps = 46/173 (26%)

Query: 12  RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQ 69
            LE  Q+D+   +SV   ++ + +  +D        +L+ NAG+  L     L  +    
Sbjct: 58  SLETLQLDVRDSKSVAAARERVTEGRVD--------VLVCNAGLGLLGPLEALGEDAVAS 109

Query: 70  MMSTNYIGAFFLTKLLLPLLK--NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRS 127
           ++  N +G   + +  LP +K   S    R++   S               + G   L  
Sbjct: 110 VLDVNVVGTVRMLQAFLPDMKRRGS---GRVLVTGS---------------VGGLMGL-- 149

Query: 128 KCYPCARIYEYSKLCLLIFS----YELHRNLGLDKSRHVSVIAADPGVVKTNI 176
              P   +Y  SK  L          L    G+    H+S+I    G V T  
Sbjct: 150 ---PFNDVYCASKFALEGLCESLAVLL-LPFGV----HLSLIE--CGPVHTAF 192

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score = 46.0 bits (110), Expect = 3e-06
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 12/92 (13%)

Query: 15  AFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL-ATSSRLTPEGYDQMMS 72
             + +++  Q      K +L Q+         I +L+NNAG        +    ++    
Sbjct: 65  GLECNVTDEQHREAVIKAALDQF-------GKITVLVNNAGGGGPKPFDMPMSDFEWAFK 117

Query: 73  TNYIGAFFLTKLLLP-LLKNSPVPSRIVNVTS 103
            N    F L++L  P + K       I+N++S
Sbjct: 118 LNLFSLFRLSQLAAPHMQKAG--GGAILNISS 147

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score = 46.0 bits (110), Expect = 3e-06
 Identities = 18/107 (16%), Positives = 40/107 (37%), Gaps = 16/107 (14%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS 60
            D+     D    +  +D+++ +SV    +   +Q          + +L+  AGI  +  
Sbjct: 55  EDLRMEGHDV--SSVVMDVTNTESVQNAVRSVHEQE-------GRVDILVACAGICISEV 105

Query: 61  ---RLTPEGYDQMMSTNYIGAFFLTKLLLP-LLKNSPVPSRIVNVTS 103
               +T   + + +  N  G F   + +   +L+       IV + S
Sbjct: 106 KAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQK--QGVIVAIGS 150

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 46.0 bits (110), Expect = 4e-06
 Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 15/98 (15%)

Query: 12  RLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATS----SRLTPEG 66
           RL+  Q D++  + + K  ++++  +         I  LINNAG              + 
Sbjct: 58  RLQFVQADVTKKEDLHKIVEEAMSHF-------GKIDFLINNAGPYVFERKKLVDYEEDE 110

Query: 67  YDQMMSTNYIGAFFLTKLLLP-LLKNSPVPSRIVNVTS 103
           +++M+  N    F L KL++P + K +    RI+N   
Sbjct: 111 WNEMIQGNLTAVFHLLKLVVPVMRKQN--FGRIINYGF 146

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score = 46.0 bits (110), Expect = 4e-06
 Identities = 19/113 (16%), Positives = 48/113 (42%), Gaps = 16/113 (14%)

Query: 12  RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQ 69
              AF+ D+S+++ V K  ++++      +    +  ++N AGI     +     + + Q
Sbjct: 72  ETMAFRCDVSNYEEVKKLLEAVK------EKFGKLDTVVNAAGINRRHPAEEFPLDEFRQ 125

Query: 70  MMSTNYIGAFFLTKLLLP-LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG 121
           ++  N  G +++ +     L ++      I+N+ S     +   +V    I+ 
Sbjct: 126 VIEVNLFGTYYVCREAFSLLRESD--NPSIINIGS-----LTVEEVTMPNISA 171

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score = 45.6 bits (109), Expect = 4e-06
 Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 3/57 (5%)

Query: 49  LINNAGILATSS--RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           L+NNAGI         + E + +++  N  G F   K ++P +K++     IVN++S
Sbjct: 83  LVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISS 138

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score = 46.1 bits (110), Expect = 4e-06
 Identities = 18/62 (29%), Positives = 23/62 (37%), Gaps = 9/62 (14%)

Query: 49  LINNAGILATSSRL-------TPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNV 101
           LI NAGI   S+ L           +D +   N  G     K  LP L +S     +V  
Sbjct: 83  LIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS--RGSVVFT 140

Query: 102 TS 103
            S
Sbjct: 141 IS 142

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score = 45.6 bits (109), Expect = 5e-06
 Identities = 16/95 (16%), Positives = 36/95 (37%), Gaps = 10/95 (10%)

Query: 11  ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYD 68
           A       D++  +++       +         + + +L+N+AGI     +       + 
Sbjct: 58  AVAARIVADVTDAEAMTAAAAEAEAV-------APVSILVNSAGIARLHDALETDDATWR 110

Query: 69  QMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           Q+M+ N  G F+ ++     +        IVN+ S
Sbjct: 111 QVMAVNVDGMFWASRAFGRAMVARG-AGAIVNLGS 144

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score = 45.6 bits (109), Expect = 5e-06
 Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 16/97 (16%)

Query: 15  AFQVDLSSFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGILATSSRL---TPEGYDQ 69
           A   D+S    V           +++       + +L+NNAGI           PE +D+
Sbjct: 59  AVAADISKEADV--------DAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDR 110

Query: 70  MMSTNYIGAFFLTKLLLPLLKNS---PVPSRIVNVTS 103
           ++  N  G + +T  L+P  K +        I+NV S
Sbjct: 111 IVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVAS 147

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 45.2 bits (108), Expect = 6e-06
 Identities = 18/98 (18%), Positives = 40/98 (40%), Gaps = 19/98 (19%)

Query: 11  ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEG 66
                   +L++ +                   S++ +L+ NAGI    LA   R+  + 
Sbjct: 60  DNYTIEVCNLANKEECSNLISK----------TSNLDILVCNAGITSDTLAI--RMKDQD 107

Query: 67  YDQMMSTNYIGAFFLTKLLL-PLLKNSPVPSRIVNVTS 103
           +D+++  N    F L +  +  +++      RI+N++S
Sbjct: 108 FDKVIDINLKANFILNREAIKKMIQKR--YGRIINISS 143

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score = 45.2 bits (108), Expect = 6e-06
 Identities = 16/98 (16%), Positives = 39/98 (39%), Gaps = 13/98 (13%)

Query: 9   KDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEG 66
           K   ++   +D++  + + +F +              + +L N AG +   +      + 
Sbjct: 48  KYPGIQTRVLDVTKKKQIDQFANE----------VERLDVLFNVAGFVHHGTVLDCEEKD 97

Query: 67  YDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF 104
           +D  M+ N    + + K  LP +      + I+N++S 
Sbjct: 98  WDFSMNLNVRSMYLMIKAFLPKMLAQKSGN-IINMSSV 134

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score = 45.2 bits (108), Expect = 6e-06
 Identities = 10/64 (15%), Positives = 20/64 (31%), Gaps = 8/64 (12%)

Query: 46  IQLLINNAGI-----LATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP-LLKNSPVPSRIV 99
           I  +++N  I            +     QM     I    L +  +  L       + ++
Sbjct: 73  IDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAG--GASVI 130

Query: 100 NVTS 103
            +TS
Sbjct: 131 FITS 134

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 45.3 bits (108), Expect = 7e-06
 Identities = 25/114 (21%), Positives = 46/114 (40%), Gaps = 25/114 (21%)

Query: 5   TSRNKDA----------RLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNA 53
           T+R  +A          R EA  +D++  + +     D L +       +  + +L+NNA
Sbjct: 35  TARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLAR-------YGRVDVLVNNA 87

Query: 54  G--ILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL--KNSPVPSRIVNVTS 103
           G   +      T      +   +  G   LT+ LLP +  + S     +VN++S
Sbjct: 88  GRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSG---SVVNISS 138

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score = 45.2 bits (108), Expect = 7e-06
 Identities = 8/62 (12%), Positives = 26/62 (41%), Gaps = 6/62 (9%)

Query: 46  IQLLINNAGI---LATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP-LLKNSPVPSRIVNV 101
           +  +++ AG    +   +++  E + + +  N  G  ++ K     +++        V +
Sbjct: 92  LHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGG--GGSFVGI 149

Query: 102 TS 103
           +S
Sbjct: 150 SS 151

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score = 45.3 bits (108), Expect = 8e-06
 Identities = 25/121 (20%), Positives = 45/121 (37%), Gaps = 29/121 (23%)

Query: 4   ITSRNKD------------------ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSS 45
           I SR  +                  AR+   Q ++ + + V     S        D    
Sbjct: 47  IASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL------DTFGK 100

Query: 46  IQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP-LLKNSPVPSRIVNVT 102
           I  L+NN G   L+ +  ++ +G+  ++ TN  G F++ K +    +K       IVN+ 
Sbjct: 101 INFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH--GGSIVNII 158

Query: 103 S 103
            
Sbjct: 159 V 159

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score = 45.0 bits (107), Expect = 8e-06
 Identities = 18/121 (14%), Positives = 33/121 (27%), Gaps = 32/121 (26%)

Query: 15  AFQVDLSSFQSVLKFKDSLQQWLLDSDM-----------HSSIQLLINNAGIL--ATSSR 61
             Q DLS+  +           +                     +L+NNA         R
Sbjct: 64  TVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLR 123

Query: 62  LTPEGYD--------------QMMSTNYIGAFFLTKLLLPLLKNSPVPS-----RIVNVT 102
              +G++               +  +N I  +FL K     +  +P         I+N+ 
Sbjct: 124 NDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMV 183

Query: 103 S 103
            
Sbjct: 184 D 184

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score = 44.9 bits (107), Expect = 9e-06
 Identities = 22/107 (20%), Positives = 46/107 (42%), Gaps = 16/107 (14%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI---LA 57
           A +  +  +A   ++  D++S ++V+      ++ +         I  L NNAG     A
Sbjct: 49  ASVREKGVEA--RSYVCDVTSEEAVIGTVDSVVRDF-------GKIDFLFNNAGYQGAFA 99

Query: 58  TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP-LLKNSPVPSRIVNVTS 103
                  + + ++++ N  GAF + K +   ++  +    RIVN  S
Sbjct: 100 PVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN--YGRIVNTAS 144

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 45.1 bits (107), Expect = 9e-06
 Identities = 31/178 (17%), Positives = 59/178 (33%), Gaps = 43/178 (24%)

Query: 7   RNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTP 64
           R+ D  L   ++D+ S  SV +  D +            I +LI+NAG +        TP
Sbjct: 55  RDNDVDLRTLELDVQSQVSVDRAIDQII------GEDGRIDVLIHNAGHMVFGPAEAFTP 108

Query: 65  EGYDQMMSTNYIGAFFLTKLLLPLL--KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGK 122
           E + ++   N +    + +  LP +  +       ++ ++S                +  
Sbjct: 109 EQFAELYDINVLSTQRVNRAALPHMRRQKH---GLLIWISS---------------SSSA 150

Query: 123 FFLRSKCYPCARIYEYSKLCLLIFS----YELHRNLGLDKSRHVSVIAADPGVVKTNI 176
                   P    Y  +K  +   +     EL    G+      S+I   PG   +  
Sbjct: 151 GGT----PPYLAPYFAAKAAMDAIAVQYAREL-SRWGI----ETSIIV--PGAFTSGT 197

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 14/62 (22%), Positives = 27/62 (43%), Gaps = 7/62 (11%)

Query: 49  LINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPS-----RIVNV 101
           L+NNAGI+     +  + E +D +++ +  G F   +      +           RI+N 
Sbjct: 118 LVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINT 177

Query: 102 TS 103
           +S
Sbjct: 178 SS 179

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 14/118 (11%), Positives = 44/118 (37%), Gaps = 26/118 (22%)

Query: 4   ITSRNKDA-------------RLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLL 49
           I   +  A               +A++ ++S  +SV +      + +        +I + 
Sbjct: 63  IWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDF-------GTIDVF 115

Query: 50  INNAGI----LATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           + NAG+             + +++++S +  G ++ +  +  + K +     ++  +S
Sbjct: 116 VANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG-KGSLIITSS 172

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 18/121 (14%), Positives = 33/121 (27%), Gaps = 32/121 (26%)

Query: 15  AFQVDLSSFQSVLKFKDSLQQWLLDSDM-----------HSSIQLLINNAGIL--ATSSR 61
             Q DLS+  +           +                     +L+NNA         R
Sbjct: 101 TVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLR 160

Query: 62  LTPEGYD--------------QMMSTNYIGAFFLTKLLLPLLKNSPVPS-----RIVNVT 102
              +G++               +  +N I  +FL K     +  +P         I+N+ 
Sbjct: 161 NDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMV 220

Query: 103 S 103
            
Sbjct: 221 D 221

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 44.5 bits (106), Expect = 1e-05
 Identities = 19/114 (16%), Positives = 42/114 (36%), Gaps = 20/114 (17%)

Query: 1   MADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI----- 55
           + D+    +D      + D++  + V +     Q+        + +  +++ AG+     
Sbjct: 31  VLDLRREGEDLI--YVEGDVTREEDVRRAVARAQE-------EAPLFAVVSAAGVGLAEK 81

Query: 56  -LATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL-LKNSPVPS----RIVNVTS 103
            L        E + +++  N +G F + +L      +N P        IVN  S
Sbjct: 82  ILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTAS 135

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score = 44.0 bits (105), Expect = 2e-05
 Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 3/57 (5%)

Query: 49  LINNAGILATSS--RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           L+NNAGIL   +        + +++  N  G F   + ++  +K +   S I+N++S
Sbjct: 85  LVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGS-IINISS 140

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score = 44.0 bits (105), Expect = 2e-05
 Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 4/58 (6%)

Query: 49  LINNAGILATSS--RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF 104
           L+NNAGIL          E + +++  N    F   +  +  +K +     I+N+ S 
Sbjct: 84  LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET--GGSIINMASV 139

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score = 44.1 bits (105), Expect = 2e-05
 Identities = 24/98 (24%), Positives = 50/98 (51%), Gaps = 13/98 (13%)

Query: 11  ARLEAFQVDLSSFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGILATSS--RLTPEG 66
           ++    +VD+SS +          + +++        + +L+NNAG   T +   +  E 
Sbjct: 73  SKAFGVRVDVSSAKDA--------ESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEET 124

Query: 67  YDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF 104
           +D++MS N  G F  +K ++P+++ +   S I+N TS+
Sbjct: 125 WDRIMSVNVKGIFLCSKYVIPVMRRNGGGS-IINTTSY 161

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score = 44.1 bits (105), Expect = 2e-05
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 4/59 (6%)

Query: 49  LINNAGILATSSRL---TPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF 104
             NNAG L     +   + EG+ + + TN   AF   K  +P +      S +   +SF
Sbjct: 89  AFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGS-LTFTSSF 146

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score = 43.6 bits (104), Expect = 2e-05
 Identities = 18/108 (16%), Positives = 40/108 (37%), Gaps = 17/108 (15%)

Query: 4   ITSRNKDARLE-----AFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL-- 56
           I SRN +   +         DL         K +L+           + +L++ A +   
Sbjct: 31  IASRNPEEAAQSLGAVPLPTDLEKDDPKGLVKRALEAL-------GGLHVLVHAAAVNVR 83

Query: 57  ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP-LLKNSPVPSRIVNVTS 103
             +  L+ E + +++  +   AF L +   P + +      R++ + S
Sbjct: 84  KPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG--WGRVLFIGS 129

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score = 43.7 bits (104), Expect = 3e-05
 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 9/63 (14%)

Query: 46  IQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSR---IVN 100
           +  L+ NAG++  +S    T E +D++++ N  GA+  TK   P +           IVN
Sbjct: 104 VDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMI----ERGGGAIVN 159

Query: 101 VTS 103
           ++S
Sbjct: 160 LSS 162

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 42.9 bits (102), Expect = 4e-05
 Identities = 21/106 (19%), Positives = 40/106 (37%), Gaps = 19/106 (17%)

Query: 4   ITSRNKD----ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LA 57
           I +RN++    +       DL     +L             +    + +L+ NAG     
Sbjct: 48  ICARNEELLKRSGHRYVVCDLRKDLDLLF------------EKVKEVDILVLNAGGPKAG 95

Query: 58  TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
               LT E + + + + ++    + +  LP +K      RIV +TS
Sbjct: 96  FFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWG-RIVAITS 140

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 43.1 bits (102), Expect = 4e-05
 Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)

Query: 46  IQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           I +++NNAGIL   + SR++ E +D +   +  G+F +T+     +K      RI+   S
Sbjct: 93  IDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNY-GRIIMTAS 151

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 43.1 bits (102), Expect = 5e-05
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)

Query: 49  LINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           +INNAGIL  A+  ++T + Y  ++  +  GAF +TK   P  +      RIVN +S
Sbjct: 95  IINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKY-GRIVNTSS 150

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 43.1 bits (102), Expect = 5e-05
 Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 3/60 (5%)

Query: 46  IQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           I +L+NNAGIL   + ++++ + +D +   + IG F L++L  P         RI+N+TS
Sbjct: 396 IDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQF-GRIINITS 454

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score = 42.5 bits (101), Expect = 6e-05
 Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 5/60 (8%)

Query: 49  LINNAGILATSS----RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF 104
           + NNA     +     ++T + +D   + N  G   + K  +P L ++   + IVN++S 
Sbjct: 89  VDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGA-IVNISSA 147

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score = 42.1 bits (100), Expect = 6e-05
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 6/60 (10%)

Query: 49  LINNAGILATSS-----RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           L+NNAGI   S          E +D++M+ N  G F   + +LP +        IVN+ S
Sbjct: 84  LVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG-AGVIVNIAS 142

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 18/109 (16%), Positives = 31/109 (28%), Gaps = 12/109 (11%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGILATS 59
           AD+++     R  A    L     VL   D L           +S + + +N  G+ A  
Sbjct: 40  ADLSTP--GGRETAVAAVLDRCGGVL---DGLVCCAGVGVTAANSGLVVAVNYFGVSALL 94

Query: 60  S----RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF 104
                 L+       +    I A       LP+++              
Sbjct: 95  DGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAML-AGDEARAIEL 142

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 3/60 (5%)

Query: 46  IQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           + +L+NNAGIL   +  + + + ++ +   +  G+F  T+   P +K      RI+  +S
Sbjct: 103 VDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNY-GRIIMTSS 161

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 17/102 (16%), Positives = 38/102 (37%), Gaps = 20/102 (19%)

Query: 15  AFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI------LATSSRLTPEGYD 68
               D++   +V    D  +          ++++++N AG       L+     +   + 
Sbjct: 56  FAAADVTDEAAVASALDLAET-------MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFR 108

Query: 69  QMMSTNYIGAFFLTKLLLPL-LKNSPVPS------RIVNVTS 103
           +++  N +G+F + +L      K  PV         I+N  S
Sbjct: 109 KIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTAS 150

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 12/101 (11%), Positives = 31/101 (30%), Gaps = 18/101 (17%)

Query: 15  AFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEG-------Y 67
               +++S  SVL   ++  Q             ++ + G       +  +G       +
Sbjct: 80  FVSTNVTSEDSVLAAIEAANQL------GRLRYAVVAHGGFGVAQRIVQRDGSPADMGGF 133

Query: 68  DQMMSTNYIGAFFLTKLLLPL-LKNSPVPS----RIVNVTS 103
            + +     G + + +L+        P  +     +V   S
Sbjct: 134 TKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTAS 174

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 40.3 bits (95), Expect = 3e-04
 Identities = 19/104 (18%), Positives = 36/104 (34%), Gaps = 17/104 (16%)

Query: 11  ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI------LATSSRLTP 64
           A +     D+++           +Q          +  L+N AG       L  S     
Sbjct: 53  AAVRFRNADVTNEADATAALAFAKQ------EFGHVHGLVNCAGTAPGEKILGRSGPHAL 106

Query: 65  EGYDQMMSTNYIGAFFLTKLLLPLL-KNSPVPS----RIVNVTS 103
           + + + ++ N IG F + +L   ++ +  P        IVN  S
Sbjct: 107 DSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTAS 150

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 39.6 bits (93), Expect = 5e-04
 Identities = 19/106 (17%), Positives = 36/106 (33%), Gaps = 19/106 (17%)

Query: 11  ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--------LATSSRL 62
                   D++S + V       +           + + +N AGI        L      
Sbjct: 58  NNCVFAPADVTSEKDVQTALALAKGK------FGRVDVAVNCAGIAVASKTYNLKKGQTH 111

Query: 63  TPEGYDQMMSTNYIGAFFLTKLLLPL-LKNSPVPS----RIVNVTS 103
           T E + +++  N +G F + +L+     +N P        I+N  S
Sbjct: 112 TLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTAS 157

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score = 39.1 bits (92), Expect = 8e-04
 Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 11/63 (17%)

Query: 49  LINNAGILATSSR----LTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSR---IVNV 101
           +  N G+L+T+         E + ++M  N  GAF + K    ++    +P++   IV  
Sbjct: 96  MFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVM----IPAKKGSIVFT 151

Query: 102 TSF 104
            S 
Sbjct: 152 ASI 154

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	266
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.98
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.97
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.97
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.97
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.97
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.97
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.97
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.97
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.97
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.96
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.96
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.96
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.96
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.96
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.96
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.96
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.96
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.96
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.96
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.96
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.96
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.96
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.96
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.96
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.96
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.96
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.96
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.96
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.96
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.96
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.96
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.96
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.96
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.96
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.96
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.96
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.96
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.96
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.96
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.96
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.96
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.96
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.96
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.96
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.96
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.96
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.96
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.96
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.96
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.96
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.96
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.96
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.96
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.96
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.96
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.96
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.96
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.96
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.96
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.96
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.96
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.96
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.96
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.96
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.96
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.96
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.96
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.96
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.95
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.95
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.95
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.95
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.95
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.95
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.95
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.95
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.95
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.95
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.95
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.95
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.95
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.95
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.95
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.95
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.95
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.95
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.95
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.95
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.95
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.95
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.95
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.95
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.95
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.95
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.95
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.95
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.95
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.95
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.95
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.95
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.95
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.95
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.95
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.95
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.95
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.95
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.95
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.95
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.95
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.95
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.95
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.95
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.95
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.95
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.95
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.95
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.95
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.95
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.95
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.94
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.94
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.94
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.94
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.94
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.94
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.94
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.94
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.94
1spx_A	278	Short-chain reductase family member (5L265); paral	99.94
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.94
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.94
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.94
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.94
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.94
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.94
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.94
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.94
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.94
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.94
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.94
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.94
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.94
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.94
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.94
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.94
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.94
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.94
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.94
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.94
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.94
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.94
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.94
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.93
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.93
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.93
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.93
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.93
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.93
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.93
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.93
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.93
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.93
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.93
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.93
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.93
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.93
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.93
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.93
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.93
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.93
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.93
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.93
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.93
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.93
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.93
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.93
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.92
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.92
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.92
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.92
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.92
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.92
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.92
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.92
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.92
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.92
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.92
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.91
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.91
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.91
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.91
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.91
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.91
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.91
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.91
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.91
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.91
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.91
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.9
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.9
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.9
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.9
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.9
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.9
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.88
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.84
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.84
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.83
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.83
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.83
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.81
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.81
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.71
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.71
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.68
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.67
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.6
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.59
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.58
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.58
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.57
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.55
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.52
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.48
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.47
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.47
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.44
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.44
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.44
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.44
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.43
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.43
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.41
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.41
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.41
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.39
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.38
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.36
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.36
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.36
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.36
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.35
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.35
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.34
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.33
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.33
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.33
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.32
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.32
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.32
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.31
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.3
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.29
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.29
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.29
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.28
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.28
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.28
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.28
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.28
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.28
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.27
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.27
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.27
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.27
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.25
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.23
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.23
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.2
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.19
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.19
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.19
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.18
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.18
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.16
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.12
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.1
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.1
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.1
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.09
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.08
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.06
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.06
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.01
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.0
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	98.98
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	98.96
4f6l_B	508	AUSA reductase domain protein; thioester reductase	98.96
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	98.94
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	98.92
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	98.87
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	98.86
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	98.78
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	98.76
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	98.7
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	98.62
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	98.45
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	98.42
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	98.4
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	98.35
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	98.33
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	98.12
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	98.03
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	97.85
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	97.66
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	97.65
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	97.58
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	97.53
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	97.13
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	96.36
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	91.58

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=3.2e-36  Score=246.98  Aligned_cols=190  Identities=24%  Similarity=0.312  Sum_probs=160.8

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC---CCCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      +.++.+++||++++++++++++++.+      ++++||+||||||+.   .++.+++.|+|+++|++|+.|+|++++.++
T Consensus        55 g~~~~~~~~Dvt~~~~v~~~~~~~~~------~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~  128 (254)
T 4fn4_A           55 GKEVLGVKADVSKKKDVEEFVRRTFE------TYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVI  128 (254)
T ss_dssp             TCCEEEEECCTTSHHHHHHHHHHHHH------HHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CCcEEEEEccCCCHHHHHHHHHHHHH------HcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            45799999999999999999999999      568999999999976   356788999999999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |+|++++ .|+||++||..+.                    .+.+...+|+++|+++..|+|+||.+++   ++|||||+
T Consensus       129 p~m~~~~-~G~IVnisS~~g~--------------------~~~~~~~~Y~asKaal~~ltr~lA~ela---~~gIrVN~  184 (254)
T 4fn4_A          129 PIMLKQG-KGVIVNTASIAGI--------------------RGGFAGAPYTVAKHGLIGLTRSIAAHYG---DQGIRAVA  184 (254)
T ss_dssp             HHHHHHT-CEEEEEECCGGGT--------------------CSSSSCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEE
T ss_pred             HHHHHcC-CcEEEEEechhhc--------------------CCCCCChHHHHHHHHHHHHHHHHHHHhh---hhCeEEEE
Confidence            9999887 8999999999873                    4667778999999999999999999998   89999999


Q ss_pred             ecCCcccCCccCcchh--HHHH-HHHHHHHHhhcCCCHHHHHHHHHHHhcCCC---CcccceeecCCCccc
Q 024553          167 ADPGVVKTNIMREVPS--FLSL-MAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTV  231 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~--~~~~-~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~---~~~G~~~~~~~g~~~  231 (266)
                      |+||+|+|++......  .... .......+++|+.+|+|+|+.++  ||.++   ..+|..+..++|-.+
T Consensus       185 V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pediA~~v~--fLaSd~a~~iTG~~i~VDGG~t~  253 (254)
T 4fn4_A          185 VLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIV--FLASDEASFVNGDAVVVDGGLTV  253 (254)
T ss_dssp             EEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHHHHHHHH--HHHSGGGTTCCSCEEEESTTGGG
T ss_pred             EEeCCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHHHHHHHHH--HHhCchhcCCcCCEEEeCCCccc
Confidence            9999999998765322  1111 22223346689999999999999  55554   457999988887543

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=5.5e-36  Score=245.70  Aligned_cols=189  Identities=17%  Similarity=0.214  Sum_probs=161.9

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||++++++++++++++.+      ++++||+||||||+.  .++.+++.++|++++++|+.|+|++++.++|
T Consensus        57 g~~~~~~~~Dv~~~~~v~~~~~~~~~------~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p  130 (255)
T 4g81_D           57 GYDAHGVAFDVTDELAIEAAFSKLDA------EGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAK  130 (255)
T ss_dssp             TCCEEECCCCTTCHHHHHHHHHHHHH------TTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCcEEEEEeeCCCHHHHHHHHHHHHH------HCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            45799999999999999999999999      789999999999987  4667889999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|.++..+|+||++||..+.                    .+.+...+|+++|+++..|+|++|.+++   ++|||||+|
T Consensus       131 ~m~~~~~~G~IVnisS~~~~--------------------~~~~~~~~Y~asKaal~~ltr~lA~ela---~~gIrVN~V  187 (255)
T 4g81_D          131 RMIARNSGGKIINIGSLTSQ--------------------AARPTVAPYTAAKGGIKMLTCSMAAEWA---QFNIQTNAI  187 (255)
T ss_dssp             HHHHHTCCEEEEEECCGGGT--------------------SBCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             HHHHccCCCEEEEEeehhhc--------------------CCCCCchhHHHHHHHHHHHHHHHHHHhc---ccCeEEEEE
Confidence            99765437999999999873                    4677788999999999999999999998   899999999


Q ss_pred             cCCcccCCccCcchhHHHH-HHHHHHHHhhcCCCHHHHHHHHHHHhcCCC---CcccceeecCCCc
Q 024553          168 DPGVVKTNIMREVPSFLSL-MAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGR  229 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~---~~~G~~~~~~~g~  229 (266)
                      +||+|+|++.......... .......|++|+.+|+|+|+.++  ||+++   ..+|..+..++|-
T Consensus       188 ~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~--fL~S~~a~~iTG~~i~VDGG~  251 (255)
T 4g81_D          188 GPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAI--FLSSKASDYINGQIIYVDGGW  251 (255)
T ss_dssp             EECSBCCGGGHHHHTCHHHHHHHHHHSTTCSCBCGGGGHHHHH--HHHSGGGTTCCSCEEEESTTG
T ss_pred             eeCCCCCchhhcccCCHHHHHHHHhCCCCCCCcCHHHHHHHHH--HHhCchhCCCcCCEEEECCCe
Confidence            9999999998664332222 22344568899999999999999  55554   4579988888774

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=1.2e-34  Score=235.24  Aligned_cols=183  Identities=17%  Similarity=0.224  Sum_probs=152.6

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      +.++..+.||++++++++++++          +++++|+||||||+..+..+++.++|+++|++|+.|++++++.++|+|
T Consensus        53 ~~~~~~~~~Dv~~~~~v~~~~~----------~~g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m  122 (242)
T 4b79_A           53 HPRIRREELDITDSQRLQRLFE----------ALPRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLL  122 (242)
T ss_dssp             CTTEEEEECCTTCHHHHHHHHH----------HCSCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             cCCeEEEEecCCCHHHHHHHHH----------hcCCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            4579999999999999988775          347899999999998888888999999999999999999999999999


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      +++  +|+||++||..+.                    .+.+...+|++||+++..|+|+||.+++   ++|||||+|+|
T Consensus       123 ~~~--~G~IVnisS~~~~--------------------~~~~~~~~Y~asKaav~~ltr~lA~Ela---~~gIrVNaV~P  177 (242)
T 4b79_A          123 AQR--GGSILNIASMYST--------------------FGSADRPAYSASKGAIVQLTRSLACEYA---AERIRVNAIAP  177 (242)
T ss_dssp             HHH--CEEEEEECCGGGT--------------------SCCSSCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEE
T ss_pred             HHc--CCeEEEEeecccc--------------------CCCCCCHHHHHHHHHHHHHHHHHHHHhh---hcCeEEEEEEe
Confidence            764  5999999999873                    4677788999999999999999999998   89999999999


Q ss_pred             CcccCCccCcchhH-HHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCC---cccceeecCCCc
Q 024553          170 GVVKTNIMREVPSF-LSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPE---TSGVYFFGGKGR  229 (266)
Q Consensus       170 G~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~---~~G~~~~~~~g~  229 (266)
                      |+|+|++....... ..........|++|+.+|+|+|+.++  ||.++.   .+|..+..++|-
T Consensus       178 G~i~T~m~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~--fLaSd~a~~iTG~~l~VDGG~  239 (242)
T 4b79_A          178 GWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAA--FLCGPGASFVTGAVLAVDGGY  239 (242)
T ss_dssp             CSBCCC-----CCCHHHHHHHHHTCTTCSCBCHHHHHHHHH--HHTSGGGTTCCSCEEEESTTG
T ss_pred             CCCCChhhhcccCCHHHHHHHHhcCCCCCCcCHHHHHHHHH--HHhCchhcCccCceEEECccH
Confidence            99999998765332 22233344568899999999999999  666654   479888877774

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=4.2e-34  Score=236.61  Aligned_cols=187  Identities=23%  Similarity=0.271  Sum_probs=154.2

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.+++||++++++++++++++.+      ++++||+||||||+.  .++.+++.|+|+++|++|+.|+|++++.++|
T Consensus        74 g~~~~~~~~Dv~~~~~v~~~~~~~~~------~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p  147 (273)
T 4fgs_A           74 GGGAVGIQADSANLAELDRLYEKVKA------EAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALP  147 (273)
T ss_dssp             CTTCEEEECCTTCHHHHHHHHHHHHH------HHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTT
T ss_pred             CCCeEEEEecCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            45688999999999999999999999      568999999999986  4678899999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++   +|+||+++|..+.                    .+.+...+|+++|+++..|++++|.+++   ++|||||+|
T Consensus       148 ~m~~---~G~IInisS~~~~--------------------~~~~~~~~Y~asKaav~~ltr~lA~Ela---~~gIrVN~V  201 (273)
T 4fgs_A          148 LLAR---GSSVVLTGSTAGS--------------------TGTPAFSVYAASKAALRSFARNWILDLK---DRGIRINTL  201 (273)
T ss_dssp             TEEE---EEEEEEECCGGGG--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHTT---TSCEEEEEE
T ss_pred             HHhh---CCeEEEEeehhhc--------------------cCCCCchHHHHHHHHHHHHHHHHHHHhc---ccCeEEEEE
Confidence            9976   5799999999873                    4677788999999999999999999998   899999999


Q ss_pred             cCCcccCCccCcchhH----H--HHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC---CcccceeecCCCcc
Q 024553          168 DPGVVKTNIMREVPSF----L--SLMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRT  230 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~----~--~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~---~~~G~~~~~~~g~~  230 (266)
                      +||+|+|++.......    .  .........|++|+.+|+|+|+.++  ||.++   ..+|..+..++|..
T Consensus       202 ~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~--FLaSd~a~~iTG~~i~VDGG~s  271 (273)
T 4fgs_A          202 SPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAAL--FLASDDSSFVTGAELFVDGGSA  271 (273)
T ss_dssp             EECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHH--HHHSGGGTTCCSCEEEESTTTT
T ss_pred             eeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHH--HHhCchhcCccCCeEeECcChh
Confidence            9999999987654221    1  1122334457899999999999999  55555   45799988888753

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=6.9e-35  Score=237.11  Aligned_cols=184  Identities=19%  Similarity=0.200  Sum_probs=154.3

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||++++++++.++           .++++|+||||||+.  .++.+++.++|+++|++|+.|+|++++.++|
T Consensus        55 g~~~~~~~~Dv~d~~~v~~~~-----------~~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~  123 (247)
T 4hp8_A           55 GGNASALLIDFADPLAAKDSF-----------TDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAK  123 (247)
T ss_dssp             TCCEEEEECCTTSTTTTTTSS-----------TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCcEEEEEccCCCHHHHHHHH-----------HhCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            457899999999999887655           357899999999987  4667889999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++++..|+||++||..+                    ..+.+...+|++||+++..|+|++|.+++   ++|||||+|
T Consensus       124 ~m~~~g~~G~IVnisS~~~--------------------~~g~~~~~~Y~asKaav~~ltr~lA~Ela---~~gIrVNaV  180 (247)
T 4hp8_A          124 ELLAKGRSGKVVNIASLLS--------------------FQGGIRVPSYTAAKHGVAGLTKLLANEWA---AKGINVNAI  180 (247)
T ss_dssp             HHHHHTCCEEEEEECCGGG--------------------TSCCSSCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             HHHHhCCCcEEEEEechhh--------------------CCCCCCChHHHHHHHHHHHHHHHHHHHHh---hcCeEEEEE
Confidence            9987654799999999987                    34677788999999999999999999998   899999999


Q ss_pred             cCCcccCCccCcchhHH-HHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCC---cccceeecCCCc
Q 024553          168 DPGVVKTNIMREVPSFL-SLMAFTVLKLLGLLQSPEKGINSVLDAALAPPE---TSGVYFFGGKGR  229 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~---~~G~~~~~~~g~  229 (266)
                      +||+|+|++........ .........|++|+.+|+|+|..++  ||.++.   .+|..+..++|-
T Consensus       181 ~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~--fLaSd~a~~iTG~~i~VDGG~  244 (247)
T 4hp8_A          181 APGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAV--FLSSAAADYVHGAILNVDGGW  244 (247)
T ss_dssp             EECSBCSGGGHHHHTSHHHHHHHHTTCTTSSCBCTHHHHHHHH--HHTSGGGTTCCSCEEEESTTG
T ss_pred             eeCCCCCcchhhcccCHHHHHHHHhCCCCCCCcCHHHHHHHHH--HHhCchhcCCcCCeEEECccc
Confidence            99999999986543322 2222334457889999999999999  666654   479988888774

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=1.5e-33  Score=230.23  Aligned_cols=184  Identities=22%  Similarity=0.209  Sum_probs=157.3

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      ..++.++.||++++++++++++++.+      ++++||+||||||+.  .+..+++.|+|++++++|+.|+|++++.++|
T Consensus        46 ~~~~~~~~~Dv~~~~~v~~~v~~~~~------~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~  119 (247)
T 3ged_A           46 RPNLFYFHGDVADPLTLKKFVEYAME------KLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRD  119 (247)
T ss_dssp             CTTEEEEECCTTSHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cCCEEEEEecCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            34689999999999999999999999      568999999999987  4567889999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|+++  +|+||++||..+                    ..+.+...+|++||+++..|+|++|.+++   + +|+||+|
T Consensus       120 ~m~~~--~G~IInisS~~~--------------------~~~~~~~~~Y~asKaal~~ltk~lA~ela---~-~IrVN~I  173 (247)
T 3ged_A          120 ELIKN--KGRIINIASTRA--------------------FQSEPDSEAYASAKGGIVALTHALAMSLG---P-DVLVNCI  173 (247)
T ss_dssp             HHHHT--TCEEEEECCGGG--------------------TSCCTTCHHHHHHHHHHHHHHHHHHHHHT---T-TSEEEEE
T ss_pred             HHhhc--CCcEEEEeeccc--------------------ccCCCCCHHHHHHHHHHHHHHHHHHHHHC---C-CCEEEEE
Confidence            99875  489999999987                    34677788999999999999999999996   5 9999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCccc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  231 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~  231 (266)
                      +||+|+|++........     ....|++|+.+|+|+|+.+++++- ++..+|..+..++|-..
T Consensus       174 ~PG~i~t~~~~~~~~~~-----~~~~Pl~R~g~pediA~~v~fL~s-~~~iTG~~i~VDGG~s~  231 (247)
T 3ged_A          174 APGWINVTEQQEFTQED-----CAAIPAGKVGTPKDISNMVLFLCQ-QDFITGETIIVDGGMSK  231 (247)
T ss_dssp             EECSBCCCC---CCHHH-----HHTSTTSSCBCHHHHHHHHHHHHH-CSSCCSCEEEESTTGGG
T ss_pred             ecCcCCCCCcHHHHHHH-----HhcCCCCCCcCHHHHHHHHHHHHh-CCCCCCCeEEECcCHHH
Confidence            99999999876654322     233578899999999999997653 45778999998888544

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=3.9e-34  Score=235.53  Aligned_cols=188  Identities=22%  Similarity=0.221  Sum_probs=154.3

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC-CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA-TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~-~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      +.++.++.||++++++++++++++.+      ++++||+||||||+.. ...+.+.|+|++++++|+.+++++++.++|+
T Consensus        54 ~~~~~~~~~Dv~~~~~v~~~v~~~~~------~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~  127 (258)
T 4gkb_A           54 QPRATYLPVELQDDAQCRDAVAQTIA------TFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPH  127 (258)
T ss_dssp             CTTCEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCCEEEEEeecCCHHHHHHHHHHHHH------HhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            45789999999999999999999999      5689999999999873 3457788999999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |+++  +|+||++||..+..                    +.+...+|+++|+++..|+|++|.+++   ++|||||+|+
T Consensus       128 m~~~--~G~IVnisS~~~~~--------------------~~~~~~~Y~asKaav~~ltr~lA~ela---~~gIrVN~V~  182 (258)
T 4gkb_A          128 LKAT--RGAIVNISSKTAVT--------------------GQGNTSGYCASKGAQLALTREWAVALR---EHGVRVNAVI  182 (258)
T ss_dssp             HHHH--TCEEEEECCTHHHH--------------------CCSSCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEE
T ss_pred             HHhc--CCeEEEEeehhhcc--------------------CCCCchHHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEe
Confidence            9764  58999999999743                    667788999999999999999999998   8999999999


Q ss_pred             CCcccCCccCcchhH-----HHHHHHHHHHHh-hcCCCHHHHHHHHHHHhcCCC---CcccceeecCCCcc
Q 024553          169 PGVVKTNIMREVPSF-----LSLMAFTVLKLL-GLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRT  230 (266)
Q Consensus       169 PG~v~T~~~~~~~~~-----~~~~~~~~~~~~-~~~~~p~~~a~~~~~~~~~~~---~~~G~~~~~~~g~~  230 (266)
                      ||+|+|++.......     ..........|+ +|+.+|+|+|+.++  ||.++   ..+|..+..++|-.
T Consensus       183 PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~v~--fLaS~~a~~iTG~~i~VDGG~T  251 (258)
T 4gkb_A          183 PAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAV--FLLSPRASHTTGEWLFVDGGYT  251 (258)
T ss_dssp             ECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHHHHHHHHH--HHHSGGGTTCCSCEEEESTTTT
T ss_pred             cCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHHHHHHH--HHhCchhcCccCCeEEECCCcc
Confidence            999999998764321     111222223355 48899999999999  55554   45899998888854

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.98  E-value=8.8e-33  Score=228.12  Aligned_cols=186  Identities=19%  Similarity=0.217  Sum_probs=153.4

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC----CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA----TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +..+++||+++.++++++++++.+      +++++|+||||||+..    ++.+++.|+|++++++|+.|++++++.++|
T Consensus        51 ~~~~~~~Dv~~~~~v~~~~~~~~~------~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p  124 (261)
T 4h15_A           51 EELFVEADLTTKEGCAIVAEATRQ------RLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVP  124 (261)
T ss_dssp             TTTEEECCTTSHHHHHHHHHHHHH------HTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cEEEEEcCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhch
Confidence            345789999999999999999999      6799999999999752    456789999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCC-hhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYP-CARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      +|++++ .|+||+++|..+.                    .+.+ +...|+++|+++..|+++++.+++   ++||+||+
T Consensus       125 ~m~~~~-~G~Iv~isS~~~~--------------------~~~~~~~~~Y~asKaal~~lt~~lA~Ela---~~gIrVN~  180 (261)
T 4h15_A          125 DMVARG-SGVVVHVTSIQRV--------------------LPLPESTTAYAAAKAALSTYSKAMSKEVS---PKGVRVVR  180 (261)
T ss_dssp             HHHHHT-CEEEEEECCGGGT--------------------SCCTTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEE
T ss_pred             hhhhcC-CceEEEEEehhhc--------------------cCCCCccHHHHHHHHHHHHHHHHHHHHhh---hhCeEEEE
Confidence            999887 8999999999873                    2343 467899999999999999999998   89999999


Q ss_pred             ecCCcccCCccCcchhHHH---------HHH----HHHHHHhhcCCCHHHHHHHHHHHhcCCC---CcccceeecCCCc
Q 024553          167 ADPGVVKTNIMREVPSFLS---------LMA----FTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGR  229 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~~~~---------~~~----~~~~~~~~~~~~p~~~a~~~~~~~~~~~---~~~G~~~~~~~g~  229 (266)
                      |+||+|+|++.........         ...    .....|++|+.+|+|+|+.++  ||.++   ..+|..+..++|-
T Consensus       181 V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peevA~~v~--fLaS~~a~~itG~~i~VDGG~  257 (261)
T 4h15_A          181 VSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEVANLIA--FLASDRAASITGAEYTIDGGT  257 (261)
T ss_dssp             EEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHHHHHHHH--HHHSGGGTTCCSCEEEESTTC
T ss_pred             EeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHHHHHHHHH--HHhCchhcCccCcEEEECCcC
Confidence            9999999998755322110         011    111236789999999999999  45554   4579988877774

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.97  E-value=9.3e-32  Score=222.20  Aligned_cols=188  Identities=15%  Similarity=0.089  Sum_probs=158.2

Q ss_pred             CCCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC------CCCcCCCcccchhhhhhhhhHHHH
Q 024553            8 NKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFL   81 (266)
Q Consensus         8 ~~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~------~~~~~~~~~~~~~~~~n~~~~~~l   81 (266)
                      .++.++.+++||++++++++++++++.+      .++++|+||||||+..      +..+.+.++|+.++++|+.+.+.+
T Consensus        55 ~~~~~~~~~~~Dv~~~~~v~~~~~~~~~------~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~  128 (256)
T 4fs3_A           55 LNQPEAHLYQIDVQSDEEVINGFEQIGK------DVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIV  128 (256)
T ss_dssp             GTCSSCEEEECCTTCHHHHHHHHHHHHH------HHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred             cCCCcEEEEEccCCCHHHHHHHHHHHHH------HhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHH
Confidence            3455789999999999999999999999      5689999999999863      234667788999999999999999


Q ss_pred             HHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCC
Q 024553           82 TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRH  161 (266)
Q Consensus        82 ~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~  161 (266)
                      ++.+.+++++   +|+||++||..+                    ..+.++...|+++|+++..|+++||.+++   ++|
T Consensus       129 ~~~~~~~~~~---~G~IVnisS~~~--------------------~~~~~~~~~Y~asKaal~~ltr~lA~Ela---~~g  182 (256)
T 4fs3_A          129 AHEAKKLMPE---GGSIVATTYLGG--------------------EFAVQNYNVMGVAKASLEANVKYLALDLG---PDN  182 (256)
T ss_dssp             HHHHHTTCTT---CEEEEEEECGGG--------------------TSCCTTTHHHHHHHHHHHHHHHHHHHHHG---GGT
T ss_pred             HHHHHHHhcc---CCEEEEEecccc--------------------ccCcccchhhHHHHHHHHHHHHHHHHHhC---ccC
Confidence            9999988765   689999999987                    34677889999999999999999999998   899


Q ss_pred             eEEEEecCCcccCCccCcchhHHH-HHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC---CcccceeecCCCc
Q 024553          162 VSVIAADPGVVKTNIMREVPSFLS-LMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGR  229 (266)
Q Consensus       162 i~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~---~~~G~~~~~~~g~  229 (266)
                      |+||+|+||+|+|++......... ........|++|+.+|+|+|+.++  ||.++   ..+|..+..++|-
T Consensus       183 IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~peevA~~v~--fL~Sd~a~~iTG~~i~VDGG~  252 (256)
T 4fs3_A          183 IRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKRNVDQVEVGKTAA--YLLSDLSSGVTGENIHVDSGF  252 (256)
T ss_dssp             EEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHH--HHHSGGGTTCCSCEEEESTTG
T ss_pred             eEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHH--HHhCchhcCccCCEEEECcCH
Confidence            999999999999999877644322 233344568899999999999999  55554   4579988888774

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.97  E-value=1.4e-30  Score=215.41  Aligned_cols=196  Identities=14%  Similarity=0.160  Sum_probs=163.5

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+.  .+..+.+.++|++++++|+.|++++++.++|
T Consensus        53 ~~~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~  126 (258)
T 3oid_A           53 GVKVLVVKANVGQPAKIKEMFQQIDE------TFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAK  126 (258)
T ss_dssp             TCCEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCcEEEEEcCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            45799999999999999999999998      568999999999976  3556788999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++++ .++||++||..+.                    .+.++...|++||++++.++++++.++.   +.+|+||+|
T Consensus       127 ~m~~~~-~g~iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gi~vn~v  182 (258)
T 3oid_A          127 LMEKNG-GGHIVSISSLGSI--------------------RYLENYTTVGVSKAALEALTRYLAVELS---PKQIIVNAV  182 (258)
T ss_dssp             HHHTTT-CEEEEEEEEGGGT--------------------SBCTTCHHHHHHHHHHHHHHHHHHHHTG---GGTEEEEEE
T ss_pred             HHHhcC-CcEEEEECchhhC--------------------CCCCCcHHHHHHHHHHHHHHHHHHHHHh---hcCcEEEEE
Confidence            999877 7999999998873                    3566778999999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHH-HHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCccccCCc
Q 024553          168 DPGVVKTNIMREVPSFLS-LMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVNSSA  235 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~~~~~  235 (266)
                      +||+|+|++......... ........+++++.+|+|+|+.+++++... ...+|..+..++|.......
T Consensus       183 ~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~  252 (258)
T 3oid_A          183 SGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQTIIVDGGRSLLVLE  252 (258)
T ss_dssp             EECCBCSGGGGGCTTHHHHHHHHHHHCTTSSCBCHHHHHHHHHHHTSSTTTTCCSCEEEESTTGGGBCC-
T ss_pred             eeCCCcChhhhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccCCccCCEEEECCCccCCCCC
Confidence            999999999876543322 222333456778899999999999544322 35689999989998776543

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.97  E-value=2.6e-31  Score=221.90  Aligned_cols=208  Identities=18%  Similarity=0.193  Sum_probs=169.7

Q ss_pred             EEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC------CCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           13 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        13 ~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      +.++.||+++.++++++++++.+      .++++|+||||||+..      +..+.+.++|++++++|+.|++.+++.++
T Consensus        58 ~~~~~~D~~~~~~v~~~~~~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  131 (275)
T 2pd4_A           58 PYVYELDVSKEEHFKSLYNSVKK------DLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLK  131 (275)
T ss_dssp             CCEEECCTTCHHHHHHHHHHHHH------HTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred             cEEEEcCCCCHHHHHHHHHHHHH------HcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            78999999999999999999988      5689999999999863      34577889999999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |.|++   +++||++||..+.                    .+.+....|+++|++++.++++++.++.   +.+|+||+
T Consensus       132 ~~~~~---~g~iv~isS~~~~--------------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~  185 (275)
T 2pd4_A          132 PLLNN---GASVLTLSYLGST--------------------KYMAHYNVMGLAKAALESAVRYLAVDLG---KHHIRVNA  185 (275)
T ss_dssp             GGEEE---EEEEEEEECGGGT--------------------SBCTTCHHHHHHHHHHHHHHHHHHHHHH---TTTCEEEE
T ss_pred             HHhcc---CCEEEEEecchhc--------------------CCCCCchhhHHHHHHHHHHHHHHHHHhh---hcCeEEEE
Confidence            99975   5899999998763                    2456677899999999999999999997   78999999


Q ss_pred             ecCCcccCCccCcchhHHHH-HHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCccc-cCCccccCHHHH
Q 024553          167 ADPGVVKTNIMREVPSFLSL-MAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV-NSSALSFNSKLA  243 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~-~~~~~~~~~~~~  243 (266)
                      |+||+|+|++.......... .......+++++.+|+++|+.+++++.. ....+|.++..++|... .+.....+++.+
T Consensus       186 v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgg~~~~~~~~~~~~~~~~  265 (275)
T 2pd4_A          186 LSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGYHVMGMGAVEEKDNKA  265 (275)
T ss_dssp             EEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBSSCCCTTCTTTT
T ss_pred             EeeCccccchhhhccccHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCcccCCCChhhcCcccc
Confidence            99999999987654321111 1122233566788999999999966543 23558998887787654 356667889999


Q ss_pred             HHHHHHHHH
Q 024553          244 GELWTTSCN  252 (266)
Q Consensus       244 ~~~~~~~~~  252 (266)
                      +++|+.+++
T Consensus       266 ~~lw~~s~~  274 (275)
T 2pd4_A          266 TLLWDLHKE  274 (275)
T ss_dssp             CCHHHHSSC
T ss_pred             hhhhhhhcc
Confidence            999998854

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.97  E-value=9.8e-31  Score=216.14  Aligned_cols=193  Identities=18%  Similarity=0.184  Sum_probs=159.3

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCC-CCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT-SSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..+ ..+.+.++|++++++|+.|++++++.++|+
T Consensus        60 ~~~~~~~~~Dv~d~~~v~~~~~~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  133 (256)
T 3gaf_A           60 GGKAIGLECNVTDEQHREAVIKAALD------QFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPH  133 (256)
T ss_dssp             TCCEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            45789999999999999999999998      55899999999998742 227788999999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |++++ .|+||++||..+.                    .+.++...|+++|++++.++++++.++.   +.+|+||+|+
T Consensus       134 ~~~~~-~g~iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~vn~v~  189 (256)
T 3gaf_A          134 MQKAG-GGAILNISSMAGE--------------------NTNVRMASYGSSKAAVNHLTRNIAFDVG---PMGIRVNAIA  189 (256)
T ss_dssp             HHHTT-CEEEEEECCGGGT--------------------CCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEE
T ss_pred             HHhcC-CcEEEEEcCHHHc--------------------CCCCCchHHHHHHHHHHHHHHHHHHHHh---hhCcEEEEEE
Confidence            99877 7899999999873                    3566778999999999999999999997   7899999999


Q ss_pred             CCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCcccc
Q 024553          169 PGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~~  232 (266)
                      ||+|+|++.................+++++.+|+|+|+.+++++.. ....+|..+..++|....
T Consensus       190 PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~  254 (256)
T 3gaf_A          190 PGAIKTDALATVLTPEIERAMLKHTPLGRLGEAQDIANAALFLCSPAAAWISGQVLTVSGGGVQE  254 (256)
T ss_dssp             ECCBCCHHHHHHCCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCC
T ss_pred             EccccCchhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCcccCccCCEEEECCCcccc
Confidence            9999999875432222222223334667888999999999965432 235579999888887653

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.97  E-value=1.2e-30  Score=216.69  Aligned_cols=197  Identities=20%  Similarity=0.189  Sum_probs=160.5

Q ss_pred             hcccCCCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHH
Q 024553            4 ITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFL   81 (266)
Q Consensus         4 i~~~~~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l   81 (266)
                      +.+..++.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.+++++
T Consensus        52 l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~  125 (265)
T 3lf2_A           52 LRQRFPGARLFASVCDVLDALQVRAFAEACER------TLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHP  125 (265)
T ss_dssp             HHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH------HHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHH
Confidence            33335555699999999999999999999998      5689999999999863  556788999999999999999999


Q ss_pred             HHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCC
Q 024553           82 TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRH  161 (266)
Q Consensus        82 ~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~  161 (266)
                      ++.++|+|++++ .++||++||..+.                    .+.+....|+++|++++.++++++.++.   +.+
T Consensus       126 ~~~~~~~~~~~~-~g~iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~g  181 (265)
T 3lf2_A          126 VRAFLPQLESRA-DAAIVCVNSLLAS--------------------QPEPHMVATSAARAGVKNLVRSMAFEFA---PKG  181 (265)
T ss_dssp             HHHHHHHHTTST-TEEEEEEEEGGGT--------------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGT
T ss_pred             HHHHHHHhhccC-CeEEEEECCcccC--------------------CCCCCchhhHHHHHHHHHHHHHHHHHhc---ccC
Confidence            999999999877 7999999998873                    3667788999999999999999999998   789


Q ss_pred             eEEEEecCCcccCCccCcchh--------HHHHHHHHHH---HHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCc
Q 024553          162 VSVIAADPGVVKTNIMREVPS--------FLSLMAFTVL---KLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  229 (266)
Q Consensus       162 i~v~~v~PG~v~T~~~~~~~~--------~~~~~~~~~~---~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~  229 (266)
                      |+||+|+||+|+|++......        ...+......   .+++++.+|+|+|+.+++++.. +...+|..+..++|.
T Consensus       182 i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~  261 (265)
T 3lf2_A          182 VRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAILFLASPLSAYTTGSHIDVSGGL  261 (265)
T ss_dssp             EEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSEEEEESSSC
T ss_pred             eEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHHHHHHHHHHHhCchhcCcCCCEEEECCCC
Confidence            999999999999998654321        1111111112   4678889999999999954432 235689998888775


Q ss_pred             c
Q 024553          230 T  230 (266)
Q Consensus       230 ~  230 (266)
                      .
T Consensus       262 ~  262 (265)
T 3lf2_A          262 S  262 (265)
T ss_dssp             C
T ss_pred             c
Confidence            4

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.97  E-value=2.4e-29  Score=211.63  Aligned_cols=220  Identities=31%  Similarity=0.409  Sum_probs=166.1

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      +.++.++.+|+++.++++++++++          +++|+||||||+..+....+.++|++++++|+.|++++++.++|.|
T Consensus        61 ~~~~~~~~~Dl~d~~~v~~~~~~~----------~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~  130 (291)
T 3rd5_A           61 AGQVEVRELDLQDLSSVRRFADGV----------SGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRL  130 (291)
T ss_dssp             SSEEEEEECCTTCHHHHHHHHHTC----------CCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGE
T ss_pred             cCCeeEEEcCCCCHHHHHHHHHhc----------CCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            457999999999999999888644          5799999999998777778999999999999999999999999998


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCC--eEEEEe
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRH--VSVIAA  167 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~--i~v~~v  167 (266)
                      .+     +||++||..+.....   +..++.    .+..++++...|++||++++.+++++++++.   +.+  |++++|
T Consensus       131 ~~-----riv~isS~~~~~~~~---~~~~~~----~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~g~~i~v~~v  195 (291)
T 3rd5_A          131 TD-----RVVTVSSMAHWPGRI---NLEDLN----WRSRRYSPWLAYSQSKLANLLFTSELQRRLT---AAGSPLRALAA  195 (291)
T ss_dssp             EE-----EEEEECCGGGTTCCC---CSSCTT----CSSSCCCHHHHHHHHHHHHHHHHHHHHHHHH---HTTCCCEEEEE
T ss_pred             Hh-----heeEeechhhccCCC---Cccccc----ccccCCCCcchHHHHHHHHHHHHHHHHHHHh---hCCCCEEEEEe
Confidence            64     899999988754321   111111    1124567788999999999999999999996   556  999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCC-CHHHHHHHHHHHhcCCCCcccceeecCCCcc-----ccCCccccCHH
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQ-SPEKGINSVLDAALAPPETSGVYFFGGKGRT-----VNSSALSFNSK  241 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~-----~~~~~~~~~~~  241 (266)
                      +||+|+|++.+.........  ....+.+++. +|+++|+.+++++.. +..+|.++..++|..     ........+++
T Consensus       196 ~PG~v~T~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~A~~~~~l~~~-~~~~G~~~~vdgG~~~~~~~~~~~~~~~~~~  272 (291)
T 3rd5_A          196 HPGYSHTNLQGASGRKLGDA--LMSAATRVVATDADFGARQTLYAASQ-DLPGDSFVGPRFGYLGRTQPVGRSRRAKDAG  272 (291)
T ss_dssp             CCSGGGSCC----------------------CHHHHHHHHHHHHHHHS-CCCTTCEEEETTSSSSCEEECCCCTGGGCHH
T ss_pred             eCCCCccccccccchHHHHH--HHHHHHHHHhCCHHHHHHHHHHHHcC-CCCCCceeCCcccccCccccCCCCcccCCHH
Confidence            99999999987754322111  1112233333 599999999987766 578999998776543     34467789999


Q ss_pred             HHHHHHHHHHHHhhhc
Q 024553          242 LAGELWTTSCNLFINS  257 (266)
Q Consensus       242 ~~~~~~~~~~~~~~~~  257 (266)
                      .++++|+.++++++..
T Consensus       273 ~~~~lw~~~~~~~~~~  288 (291)
T 3rd5_A          273 MAAALWALSEQLTKTE  288 (291)
T ss_dssp             HHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHHccc
Confidence            9999999999998753

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.97  E-value=8.5e-30  Score=213.72  Aligned_cols=205  Identities=17%  Similarity=0.188  Sum_probs=153.1

Q ss_pred             EEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC------CCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           13 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        13 ~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      +.++.||+++.++++++++++.+      .++++|+||||||+..      +..+.+.++|++++++|+.|++.+++.++
T Consensus        73 ~~~~~~Dl~~~~~v~~~~~~~~~------~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  146 (285)
T 2p91_A           73 DLVVKCDVSLDEDIKNLKKFLEE------NWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELL  146 (285)
T ss_dssp             CCEEECCTTCHHHHHHHHHHHHH------HTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred             eEEEEcCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            67899999999999999999998      6689999999999863      34467888999999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |.|+++  +++||++||..+.                    .+.+....|+++|++++.++++++.++.   +.+|+||+
T Consensus       147 ~~~~~~--~g~iv~isS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~  201 (285)
T 2p91_A          147 PLMEGR--NGAIVTLSYYGAE--------------------KVVPHYNVMGIAKAALESTVRYLAYDIA---KHGHRINA  201 (285)
T ss_dssp             GGGTTS--CCEEEEEECGGGT--------------------SBCTTTTHHHHHHHHHHHHHHHHHHHHH---TTTCEEEE
T ss_pred             HHHHHc--CCEEEEEccchhc--------------------cCCCCccHHHHHHHHHHHHHHHHHHHhc---ccCcEEEE
Confidence            999753  5899999998763                    2455667899999999999999999997   78999999


Q ss_pred             ecCCcccCCccCcchhHHHH-HHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCccccCCccccCHHHHH
Q 024553          167 ADPGVVKTNIMREVPSFLSL-MAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVNSSALSFNSKLAG  244 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~~~~~~~~~~~~~~  244 (266)
                      |+||+|+|++.......... .......+++++.+|+++|+.+++++.. ....+|..+..++|... ...+..+++.++
T Consensus       202 v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgg~~~-~~~~~~~~~~~~  280 (285)
T 2p91_A          202 ISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTAVFLCSDWARAITGEVVHVDNGYHI-MGVFGREEEIKK  280 (285)
T ss_dssp             EEECCCCCSCC--CTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG-BSCC--------
T ss_pred             EEeCcccCchhhcccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCcccCCCCCEEEECCCccc-ccccCChHHHHH
Confidence            99999999987654321111 1112233566788999999999965432 12457998887787655 356688999999


Q ss_pred             HHHHH
Q 024553          245 ELWTT  249 (266)
Q Consensus       245 ~~~~~  249 (266)
                      +||+.
T Consensus       281 ~lw~~  285 (285)
T 2p91_A          281 EVYGD  285 (285)
T ss_dssp             -----
T ss_pred             HhcCC
Confidence            99973

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.97  E-value=6e-30  Score=213.10  Aligned_cols=192  Identities=16%  Similarity=0.175  Sum_probs=159.7

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++++++.++|
T Consensus        74 ~~~~~~~~~Dv~d~~~v~~~~~~~~~------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  147 (271)
T 4ibo_A           74 GHDAEAVAFDVTSESEIIEAFARLDE------QGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAK  147 (271)
T ss_dssp             TCCEEECCCCTTCHHHHHHHHHHHHH------HTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCceEEEEcCCCCHHHHHHHHHHHHH------HCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            45789999999999999999999998      6789999999999873  456788999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++++ .|+||++||..+.                    .+.++...|+++|++++.++++++.++.   +.+|+||+|
T Consensus       148 ~~~~~~-~g~iV~isS~~~~--------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v  203 (271)
T 4ibo_A          148 RMIPRG-YGKIVNIGSLTSE--------------------LARATVAPYTVAKGGIKMLTRAMAAEWA---QYGIQANAI  203 (271)
T ss_dssp             HHHHHT-CEEEEEECCGGGT--------------------SBCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             HHHhcC-CcEEEEEccHHhC--------------------CCCCCchhHHHHHHHHHHHHHHHHHHHh---hhCeEEEEE
Confidence            998876 7899999998873                    3566778899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhH-HHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCccc
Q 024553          168 DPGVVKTNIMREVPSF-LSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  231 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~  231 (266)
                      +||+|+|++....... ..........+++++.+|+|+|+.+++++.. +...+|..+..++|...
T Consensus       204 ~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~  269 (271)
T 4ibo_A          204 GPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFLSASASDYVNGQIIYVDGGMLS  269 (271)
T ss_dssp             EECSBCSGGGHHHHHCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             EeccEeCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCcEEEECCCeec
Confidence            9999999987654221 1112223344677889999999999965432 23568999988888654

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.96  E-value=8.1e-30  Score=211.34  Aligned_cols=193  Identities=21%  Similarity=0.214  Sum_probs=160.2

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.||+++.++++++++++.+      .++++|+||||||+.  .+..+.+.++|++++++|+.|++++++.++|+
T Consensus        60 ~~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~  133 (262)
T 3pk0_A           60 GKVIGVQTDVSDRAQCDALAGRAVE------EFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDA  133 (262)
T ss_dssp             SCEEEEECCTTSHHHHHHHHHHHHH------HHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CcEEEEEcCCCCHHHHHHHHHHHHH------HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            5799999999999999999999998      568999999999987  35667889999999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |++++ .++||++||..+..                   .+.++...|+++|++++.++++++.++.   +.+|+||+|+
T Consensus       134 m~~~~-~g~iv~isS~~~~~-------------------~~~~~~~~Y~asK~a~~~l~~~la~e~~---~~gi~vn~v~  190 (262)
T 3pk0_A          134 LIASG-SGRVVLTSSITGPI-------------------TGYPGWSHYGATKAAQLGFMRTAAIELA---PHKITVNAIM  190 (262)
T ss_dssp             HHHHS-SCEEEEECCSBTTT-------------------BCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEE
T ss_pred             HHhcC-CcEEEEEechhhcc-------------------CCCCCChhhHHHHHHHHHHHHHHHHHHH---hhCcEEEEEE
Confidence            98876 78999999988631                   3566778999999999999999999997   7899999999


Q ss_pred             CCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCccccC
Q 024553          169 PGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVNS  233 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~~~  233 (266)
                      ||+|.|++.....+.. ........+++++.+|+|+|+.+++++.. ....+|..+..++|..++.
T Consensus       191 PG~v~t~~~~~~~~~~-~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~~~~  255 (262)
T 3pk0_A          191 PGNIMTEGLLENGEEY-IASMARSIPAGALGTPEDIGHLAAFLATKEAGYITGQAIAVDGGQVLPE  255 (262)
T ss_dssp             ECSBCCHHHHTTCHHH-HHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTCCS
T ss_pred             eCcCcCccccccCHHH-HHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCeecCc
Confidence            9999999765543321 12222234567888999999999955432 2356899999888877643

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.96  E-value=2.7e-30  Score=212.44  Aligned_cols=191  Identities=19%  Similarity=0.254  Sum_probs=157.8

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++++++.++|
T Consensus        51 ~~~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  124 (247)
T 3rwb_A           51 GKKARAIAADISDPGSVKALFAEIQA------LTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTD  124 (247)
T ss_dssp             CTTEEECCCCTTCHHHHHHHHHHHHH------HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCceEEEEcCCCCHHHHHHHHHHHHH------HCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            35789999999999999999999998      5689999999999873  456778999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++++..++||++||..+..                    +.++...|+++|+++..++++++.++.   +.+|+||+|
T Consensus       125 ~~~~~~~~g~iv~isS~~~~~--------------------~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~vn~v  181 (247)
T 3rwb_A          125 QMRAAGKAGRVISIASNTFFA--------------------GTPNMAAYVAAKGGVIGFTRALATELG---KYNITANAV  181 (247)
T ss_dssp             HHHHHTCCEEEEEECCTHHHH--------------------TCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             HHHHcCCCcEEEEECchhhcc--------------------CCCCchhhHHHHHHHHHHHHHHHHHhh---hcCeEEEEE
Confidence            998765468999999988743                    566778999999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      +||+|+|++....+............+++++.+|+++|+.+++++... ...+|..+..++|.
T Consensus       182 ~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~  244 (247)
T 3rwb_A          182 TPGLIESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIADVVSFLASDDARWITGQTLNVDAGM  244 (247)
T ss_dssp             EECSBCCHHHHTSGGGGGHHHHHHHSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             eeCcCcCccccccChhHHHHHHhcccccCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            999999998766544332222222245677889999999999544322 24579998877774

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.96  E-value=8e-30  Score=214.53  Aligned_cols=197  Identities=21%  Similarity=0.218  Sum_probs=162.3

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++++++.++|.
T Consensus        91 ~~~~~~~~Dv~d~~~v~~~~~~~~~------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  164 (293)
T 3rih_A           91 GNVIGVRLDVSDPGSCADAARTVVD------AFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAP  164 (293)
T ss_dssp             SCEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHH
T ss_pred             CcEEEEEEeCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            5799999999999999999999998      5689999999999873  4567889999999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |++++ .++||++||..+..                   .+.++...|+++|++++.++++++.+++   +.+|+||+|+
T Consensus       165 m~~~~-~g~iV~isS~~~~~-------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v~  221 (293)
T 3rih_A          165 LTASG-RGRVILTSSITGPV-------------------TGYPGWSHYGASKAAQLGFMRTAAIELA---PRGVTVNAIL  221 (293)
T ss_dssp             HHHHS-SCEEEEECCSBTTT-------------------BBCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEE
T ss_pred             HHHcC-CCEEEEEeChhhcc-------------------CCCCCCHHHHHHHHHHHHHHHHHHHHHh---hhCeEEEEEe
Confidence            98876 78999999988631                   2456678999999999999999999998   7899999999


Q ss_pred             CCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCccccCCccc
Q 024553          169 PGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVNSSALS  237 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~~~~~~~  237 (266)
                      ||+|.|++........ ........+++++.+|+|+|+.+++++.. ....+|..+..++|..++.....
T Consensus       222 PG~v~t~~~~~~~~~~-~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~~~~~~~~  290 (293)
T 3rih_A          222 PGNILTEGLVDMGEEY-ISGMARSIPMGMLGSPVDIGHLAAFLATDEAGYITGQAIVVDGGQVLPESPDA  290 (293)
T ss_dssp             ECSBCCHHHHHTCHHH-HHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTCBSSGGG
T ss_pred             cCCCcCcchhhccHHH-HHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccCCCCCCC
Confidence            9999999875543221 11122234667888999999999955432 23568999998999887655443

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.96  E-value=1.1e-29  Score=209.65  Aligned_cols=192  Identities=22%  Similarity=0.267  Sum_probs=159.7

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++++++.++|
T Consensus        53 ~~~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  126 (255)
T 4eso_A           53 GPRVHALRSDIADLNEIAVLGAAAGQ------TLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTP  126 (255)
T ss_dssp             GGGEEEEECCTTCHHHHHHHHHHHHH------HHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred             CCcceEEEccCCCHHHHHHHHHHHHH------HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            35789999999999999999999988      5589999999999873  456778999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++   .|+||++||..+.                    .+.++...|+++|++++.++++++.++.   +.+|+||+|
T Consensus       127 ~~~~---~g~iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~vn~v  180 (255)
T 4eso_A          127 LIRE---GGSIVFTSSVADE--------------------GGHPGMSVYSASKAALVSFASVLAAELL---PRGIRVNSV  180 (255)
T ss_dssp             GEEE---EEEEEEECCGGGS--------------------SBCTTBHHHHHHHHHHHHHHHHHHHHTG---GGTCEEEEE
T ss_pred             HHhc---CCEEEEECChhhc--------------------CCCCCchHHHHHHHHHHHHHHHHHHHHh---hhCcEEEEE
Confidence            9976   5799999999873                    3566778999999999999999999997   789999999


Q ss_pred             cCCcccCCccCcc--hhHHH---HHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCccccC
Q 024553          168 DPGVVKTNIMREV--PSFLS---LMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNS  233 (266)
Q Consensus       168 ~PG~v~T~~~~~~--~~~~~---~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~~  233 (266)
                      +||+|+|++....  .....   ........+++++.+|+|+|+.+++++..+...+|..+..++|.....
T Consensus       181 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~itG~~i~vdGG~~~~l  251 (255)
T 4eso_A          181 SPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAFEATFTTGAKLAVDGGLGQKL  251 (255)
T ss_dssp             EECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHHTCTTCCSCEEEESTTTTTTB
T ss_pred             ecCcccCcccccccCChhhHHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCcCcCccCCEEEECCCccccC
Confidence            9999999987542  22111   111223346788899999999999766554567899998888876654

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.96  E-value=5.7e-30  Score=210.36  Aligned_cols=189  Identities=20%  Similarity=0.229  Sum_probs=157.3

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++++++.++|
T Consensus        53 ~~~~~~~~~Dv~d~~~v~~~~~~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~  126 (246)
T 3osu_A           53 GVDSFAIQANVADADEVKAMIKEVVS------QFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATP  126 (246)
T ss_dssp             TSCEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCcEEEEEccCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            45789999999999999999999998      5689999999999873  456778999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++++ .++||++||..+..                    +.++...|+++|++++.++++++.++.   +.+|+||+|
T Consensus       127 ~~~~~~-~g~iv~isS~~~~~--------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~vn~v  182 (246)
T 3osu_A          127 QMLRQR-SGAIINLSSVVGAV--------------------GNPGQANYVATKAGVIGLTKSAARELA---SRGITVNAV  182 (246)
T ss_dssp             HHHHHT-CEEEEEECCHHHHH--------------------CCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             HHHHcC-CCEEEEEcchhhcC--------------------CCCCChHHHHHHHHHHHHHHHHHHHhc---ccCeEEEEE
Confidence            998776 78999999988743                    456678899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      +||+|+|++.....+... .......+++++.+|+|+|+.+++++... ...+|..+..++|.
T Consensus       183 ~PG~v~t~~~~~~~~~~~-~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdgG~  244 (246)
T 3osu_A          183 APGFIVSDMTDALSDELK-EQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGGM  244 (246)
T ss_dssp             EECSBGGGCCSCSCHHHH-HHHHTTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTS
T ss_pred             EECCCcCCcccccCHHHH-HHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            999999999876544321 12222346678889999999999543321 24579988877774

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.96  E-value=7e-30  Score=210.04  Aligned_cols=188  Identities=21%  Similarity=0.261  Sum_probs=157.1

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      .+.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++++++.++|+|
T Consensus        56 ~~~~~~~Dv~d~~~v~~~~~~~~~------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m  129 (248)
T 3op4_A           56 NGKGMALNVTNPESIEAVLKAITD------EFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGM  129 (248)
T ss_dssp             GEEEEECCTTCHHHHHHHHHHHHH------HHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             cceEEEEeCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            578999999999999999999998      5689999999999874  45677899999999999999999999999999


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      ++++ .|+||++||..+..                    +.++...|+++|++++.++++++.++.   +.+|+||+|+|
T Consensus       130 ~~~~-~g~iv~isS~~~~~--------------------~~~~~~~Y~asK~a~~~l~~~la~e~~---~~gi~vn~v~P  185 (248)
T 3op4_A          130 MKKR-QGRIINVGSVVGTM--------------------GNAGQANYAAAKAGVIGFTKSMAREVA---SRGVTVNTVAP  185 (248)
T ss_dssp             HHHT-CEEEEEECCHHHHH--------------------CCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEE
T ss_pred             HHcC-CCEEEEEcchhhcC--------------------CCCCChHHHHHHHHHHHHHHHHHHHHH---HhCeEEEEEee
Confidence            8776 78999999988743                    556778899999999999999999997   78999999999


Q ss_pred             CcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCcc
Q 024553          170 GVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  230 (266)
Q Consensus       170 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~  230 (266)
                      |+|+|++........ ........+.+++.+|+|+|+.+++++... ...+|..+..++|..
T Consensus       186 G~v~T~~~~~~~~~~-~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdgG~~  246 (248)
T 3op4_A          186 GFIETDMTKALNDEQ-RTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVNGGMY  246 (248)
T ss_dssp             CSBSSTTTTTSCHHH-HHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             CCCCCchhhhcCHHH-HHHHHhcCCCCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCCee
Confidence            999999987654332 222233346678889999999999554321 345799988887753

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.96  E-value=1.7e-29  Score=210.33  Aligned_cols=189  Identities=21%  Similarity=0.232  Sum_probs=154.4

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++++++.++|
T Consensus        67 ~~~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  140 (270)
T 3is3_A           67 GSDAIAIKADIRQVPEIVKLFDQAVA------HFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYR  140 (270)
T ss_dssp             TCCEEEEECCTTSHHHHHHHHHHHHH------HHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCcEEEEEcCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            45789999999999999999999998      5689999999999873  456778999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++   .|+||++||..+.                   ..+.++...|+++|++++.++++++.++.   +.+|+||+|
T Consensus       141 ~~~~---~g~iv~isS~~~~-------------------~~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~vn~v  195 (270)
T 3is3_A          141 HLTE---GGRIVLTSSNTSK-------------------DFSVPKHSLYSGSKGAVDSFVRIFSKDCG---DKKITVNAV  195 (270)
T ss_dssp             HCCT---TCEEEEECCTTTT-------------------TCCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEE
T ss_pred             HHhc---CCeEEEEeCchhc-------------------cCCCCCCchhHHHHHHHHHHHHHHHHHhc---ccCeEEEEE
Confidence            9976   5799999998732                   23566778899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcc-----------hhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCc
Q 024553          168 DPGVVKTNIMREV-----------PSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  229 (266)
Q Consensus       168 ~PG~v~T~~~~~~-----------~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~  229 (266)
                      +||+|+|++....           .............+++++.+|+|+|+.+++++.. +...+|..+..++|.
T Consensus       196 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  269 (270)
T 3is3_A          196 APGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGGA  269 (270)
T ss_dssp             EECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             EeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCccCCccCcEEEeCCCC
Confidence            9999999987531           1112222233345778889999999999954321 124579988877774

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.96  E-value=1.4e-29  Score=209.55  Aligned_cols=190  Identities=18%  Similarity=0.191  Sum_probs=156.5

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++++++.++|.
T Consensus        54 ~~~~~~~~D~~~~~~v~~~~~~~~~------~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~  127 (259)
T 4e6p_A           54 PAAYAVQMDVTRQDSIDAAIAATVE------HAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQ  127 (259)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHHHH------HSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCceEEEeeCCCHHHHHHHHHHHHH------HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            4688999999999999999999998      6789999999999863  4567788999999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |++++..|+||++||..+.                    .+.+....|+++|++++.++++++.++.   +.+|+||+|+
T Consensus       128 ~~~~~~~g~iv~isS~~~~--------------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~vn~v~  184 (259)
T 4e6p_A          128 MIAQGRGGKIINMASQAGR--------------------RGEALVAIYCATKAAVISLTQSAGLDLI---KHRINVNAIA  184 (259)
T ss_dssp             HHHHTSCEEEEEECCGGGT--------------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEE
T ss_pred             HHhcCCCeEEEEECChhhc--------------------cCCCCChHHHHHHHHHHHHHHHHHHHhh---hcCCEEEEEE
Confidence            9875446899999999873                    3566778899999999999999999997   7899999999


Q ss_pred             CCcccCCccCcchh----------HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC---CcccceeecCCCccc
Q 024553          169 PGVVKTNIMREVPS----------FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTV  231 (266)
Q Consensus       169 PG~v~T~~~~~~~~----------~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~---~~~G~~~~~~~g~~~  231 (266)
                      ||+|+|++......          ...........+++++.+|+|+|+.++  ++.++   ..+|..+..++|..+
T Consensus       185 PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~--~L~s~~~~~itG~~i~vdgG~~~  258 (259)
T 4e6p_A          185 PGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAI--FLASAESDYIVSQTYNVDGGNWM  258 (259)
T ss_dssp             ECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHH--HTTSGGGTTCCSCEEEESTTSSC
T ss_pred             ECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHH--HHhCCccCCCCCCEEEECcChhc
Confidence            99999998654311          111122233346778899999999999  44443   456988888887643

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.96  E-value=2e-29  Score=210.85  Aligned_cols=195  Identities=22%  Similarity=0.227  Sum_probs=160.2

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC---CCCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+.   .+..+.+.++|++++++|+.|++++++.++
T Consensus        56 ~~~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~  129 (280)
T 3tox_A           56 GGEAAALAGDVGDEALHEALVELAVR------RFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQV  129 (280)
T ss_dssp             TCCEEECCCCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CCcEEEEECCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            45799999999999999999999998      568999999999976   345678899999999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |.|++++ .|+||++||..+..                   .+.++...|+++|++++.++++++.++.   +.+|+||+
T Consensus       130 ~~~~~~~-~g~iv~isS~~~~~-------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gIrvn~  186 (280)
T 3tox_A          130 PAIAALG-GGSLTFTSSFVGHT-------------------AGFAGVAPYAASKAGLIGLVQALAVELG---ARGIRVNA  186 (280)
T ss_dssp             HHHHHTT-CEEEEEECCSBTTT-------------------BCCTTCHHHHHHHHHHHHHHHHHHHHHH---TTTEEEEE
T ss_pred             HHHHHcC-CCEEEEEcChhhCc-------------------CCCCCchhHHHHHHHHHHHHHHHHHHhh---hcCeEEEE
Confidence            9999877 78999999988631                   2566778899999999999999999997   78999999


Q ss_pred             ecCCcccCCccCc-ch--hHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCccccC
Q 024553          167 ADPGVVKTNIMRE-VP--SFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVNS  233 (266)
Q Consensus       167 v~PG~v~T~~~~~-~~--~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~~~  233 (266)
                      |+||+|+|++... .+  ............+++++.+|+|+|+.+++++... ...+|..+..++|..+..
T Consensus       187 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~~  257 (280)
T 3tox_A          187 LLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLASDGASFVTGAALLADGGASVTK  257 (280)
T ss_dssp             EEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             EEECCCCCchhhhhccccCHHHHHHHhccCccCCCcCHHHHHHHHHHHhCccccCCcCcEEEECCCccccc
Confidence            9999999998654 21  1111111222345677889999999999655432 356899999899877654

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.96  E-value=4e-29  Score=206.27  Aligned_cols=189  Identities=22%  Similarity=0.264  Sum_probs=153.8

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC---CCCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+.   .+..+.+.++|++++++|+.|++++++.++
T Consensus        49 ~~~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~  122 (254)
T 3kzv_A           49 GDRFFYVVGDITEDSVLKQLVNAAVK------GHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIAL  122 (254)
T ss_dssp             GGGEEEEESCTTSHHHHHHHHHHHHH------HHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CCceEEEECCCCCHHHHHHHHHHHHH------hcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            35789999999999999999999998      568999999999985   345677899999999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |+|++++  |+||++||..+.                    .+.++...|+++|++++.++++++.++     ++|+||+
T Consensus       123 ~~m~~~~--g~iv~isS~~~~--------------------~~~~~~~~Y~asK~a~~~~~~~la~e~-----~~i~vn~  175 (254)
T 3kzv_A          123 PELKKTN--GNVVFVSSDACN--------------------MYFSSWGAYGSSKAALNHFAMTLANEE-----RQVKAIA  175 (254)
T ss_dssp             HHHHHHT--CEEEEECCSCCC--------------------CSSCCSHHHHHHHHHHHHHHHHHHHHC-----TTSEEEE
T ss_pred             HHHHhcC--CeEEEEcCchhc--------------------cCCCCcchHHHHHHHHHHHHHHHHhhc-----cCcEEEE
Confidence            9998754  899999999873                    356677899999999999999999996     5899999


Q ss_pred             ecCCcccCCccCcchh--------HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC--CCcccceeecCCCccc
Q 024553          167 ADPGVVKTNIMREVPS--------FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP--PETSGVYFFGGKGRTV  231 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~--------~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~--~~~~G~~~~~~~g~~~  231 (266)
                      |+||+|+|++......        ...........+++++.+|+|+|+.+++++...  ...+|.++..++|+..
T Consensus       176 v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~L~s~~~~~~itG~~i~vdg~~~~  250 (254)
T 3kzv_A          176 VAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALHGIPDGVNGQYLSYNDPALA  250 (254)
T ss_dssp             EECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CHHHHHHHHHHHHHCCCGGGTTCEEETTCGGGG
T ss_pred             EeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcccHHHHHHHHHhhcccCCCCccEEEecCcccc
Confidence            9999999999865421        222233344556778889999999999765433  3568999998877654

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.96  E-value=2e-29  Score=209.34  Aligned_cols=191  Identities=17%  Similarity=0.158  Sum_probs=151.4

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.+++.+++.++|
T Consensus        72 ~~~~~~~~~Dl~~~~~v~~~~~~~~~------~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  145 (266)
T 3o38_A           72 LGRVEAVVCDVTSTEAVDALITQTVE------KAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALR  145 (266)
T ss_dssp             SSCEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCceEEEEeCCCCHHHHHHHHHHHHH------HhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            46899999999999999999999998      5589999999999863  445778899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++++..++||++||..+.                    .+.++...|+++|++++.++++++.++.   +.+|+|++|
T Consensus       146 ~~~~~~~~~~iv~~sS~~~~--------------------~~~~~~~~Y~~sKaa~~~~~~~la~e~~---~~gi~v~~v  202 (266)
T 3o38_A          146 YFRGVDHGGVIVNNASVLGW--------------------RAQHSQSHYAAAKAGVMALTRCSAIEAV---EFGVRINAV  202 (266)
T ss_dssp             HHHTSSCCEEEEEECCGGGT--------------------CCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             HHHhcCCCeEEEEeCCHHHc--------------------CCCCCCchHHHHHHHHHHHHHHHHHHHH---HcCcEEEEE
Confidence            99987437899999998873                    3566778999999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  229 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~  229 (266)
                      +||+|+|++.................+++++.+|+|+|+.+++++.. +...+|.++..++|.
T Consensus       203 ~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~  265 (266)
T 3o38_A          203 SPSIARHKFLEKTSSSELLDRLASDEAFGRAAEPWEVAATIAFLASDYSSYMTGEVVSVSSQR  265 (266)
T ss_dssp             EECCCCC-----------------CCTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESSCC
T ss_pred             eCCcccchhhhccCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCccccCccCCEEEEcCCc
Confidence            99999999977653322222222334567788999999999965543 245689999887774

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.96  E-value=7.1e-30  Score=212.19  Aligned_cols=188  Identities=22%  Similarity=0.244  Sum_probs=148.4

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++.+++.++|
T Consensus        76 ~~~~~~~~~Dl~~~~~v~~~~~~~~~------~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~  149 (267)
T 3u5t_A           76 GGKALTAQADVSDPAAVRRLFATAEE------AFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQ  149 (267)
T ss_dssp             TCCEEEEECCTTCHHHHHHHHHHHHH------HHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEEcCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45789999999999999999999998      5589999999999873  456778899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++   .|+||++||..+..                    +.+....|++||++++.++++++.++.   +.+|+||+|
T Consensus       150 ~~~~---~g~iv~isS~~~~~--------------------~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v  203 (267)
T 3u5t_A          150 RLRV---GGRIINMSTSQVGL--------------------LHPSYGIYAAAKAGVEAMTHVLSKELR---GRDITVNAV  203 (267)
T ss_dssp             HEEE---EEEEEEECCTHHHH--------------------CCTTCHHHHHHHHHHHHHHHHHHHHTT---TSCCEEEEE
T ss_pred             HHhh---CCeEEEEeChhhcc--------------------CCCCchHHHHHHHHHHHHHHHHHHHhh---hhCCEEEEE
Confidence            9976   57999999988733                    456678899999999999999999998   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      +||+|+|++.................+++++.+|+|+|+.+++++... ...+|..+..++|-
T Consensus       204 ~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  266 (267)
T 3u5t_A          204 APGPTATDLFLEGKSDEVRDRFAKLAPLERLGTPQDIAGAVAFLAGPDGAWVNGQVLRANGGI  266 (267)
T ss_dssp             EECCBC-----------CHHHHHTSSTTCSCBCHHHHHHHHHHHHSTTTTTCCSEEEEESSSC
T ss_pred             EECCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEeCCCc
Confidence            999999998755322221222223346678889999999999544321 24589998877763

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.96  E-value=1.5e-30  Score=215.77  Aligned_cols=191  Identities=18%  Similarity=0.156  Sum_probs=148.7

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++++++.++|
T Consensus        62 ~~~~~~~~~Dv~d~~~v~~~~~~~~~------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  135 (262)
T 3ksu_A           62 GAKVALYQSDLSNEEEVAKLFDFAEK------EFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAK  135 (262)
T ss_dssp             TCEEEEEECCCCSHHHHHHHHHHHHH------HHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCcEEEEECCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            45799999999999999999999998      5689999999999873  455778999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++   .++||++||..+..                    +.+....|+++|+++..++++++.++.   +.+|+||+|
T Consensus       136 ~m~~---~g~iv~isS~~~~~--------------------~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gi~vn~v  189 (262)
T 3ksu_A          136 HMNP---NGHIITIATSLLAA--------------------YTGFYSTYAGNKAPVEHYTRAASKELM---KQQISVNAI  189 (262)
T ss_dssp             TEEE---EEEEEEECCCHHHH--------------------HHCCCCC-----CHHHHHHHHHHHHTT---TTTCEEEEE
T ss_pred             hhcC---CCEEEEEechhhcc--------------------CCCCCchhHHHHHHHHHHHHHHHHHHH---HcCcEEEEE
Confidence            9954   68999999988643                    334456799999999999999999998   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      +||+|+|++.................+.+++.+|+++|+.+++++..+...+|..+..++|....
T Consensus       190 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~~~itG~~i~vdGg~~~~  254 (262)
T 3ksu_A          190 APGPMDTSFFYGQETKESTAFHKSQAMGNQLTKIEDIAPIIKFLTTDGWWINGQTIFANGGYTTR  254 (262)
T ss_dssp             EECCCCTHHHHTCC------------CCCCSCCGGGTHHHHHHHHTTTTTCCSCEEEESTTCCCC
T ss_pred             eeCCCcCccccccCchHHHHHHHhcCcccCCCCHHHHHHHHHHHcCCCCCccCCEEEECCCccCC
Confidence            99999999875533322222233344667888999999999976554445689999888876543

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.96  E-value=2.2e-29  Score=210.67  Aligned_cols=193  Identities=25%  Similarity=0.297  Sum_probs=141.7

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC----CCCCcCCCcccchhhhhhhhhHHHHHHhh
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL----ATSSRLTPEGYDQMMSTNYIGAFFLTKLL   85 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~   85 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+.    .+..+.+.++|++++++|+.|++++++.+
T Consensus        78 ~~~~~~~~~Dv~d~~~v~~~~~~~~~------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~  151 (280)
T 4da9_A           78 GARVIFLRADLADLSSHQATVDAVVA------EFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAV  151 (280)
T ss_dssp             TCCEEEEECCTTSGGGHHHHHHHHHH------HHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHH
T ss_pred             CCcEEEEEecCCCHHHHHHHHHHHHH------HcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHH
Confidence            45799999999999999999999998      568999999999983    35567789999999999999999999999


Q ss_pred             HHHHhcCC--CCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeE
Q 024553           86 LPLLKNSP--VPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVS  163 (266)
Q Consensus        86 ~~~l~~~~--~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~  163 (266)
                      +|.|++++  ..++||++||..+.                    .+.+....|+++|++++.++++++.++.   +.+|+
T Consensus       152 ~~~~~~~~~~~~g~Iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~  208 (280)
T 4da9_A          152 LKAMLASDARASRSIINITSVSAV--------------------MTSPERLDYCMSKAGLAAFSQGLALRLA---ETGIA  208 (280)
T ss_dssp             HHHHHHHCCCCCEEEEEECCC---------------------------CCHHHHHHHHHHHHHHHHHHHHHT---TTTEE
T ss_pred             HHHHHHhCCCCCCEEEEEcchhhc--------------------cCCCCccHHHHHHHHHHHHHHHHHHHHH---HhCcE
Confidence            99997643  25799999998873                    3556678899999999999999999998   78999


Q ss_pred             EEEecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCccc
Q 024553          164 VIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  231 (266)
Q Consensus       164 v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~  231 (266)
                      ||+|+||+|+|++.................+++++.+|+|+|+.+++++... ...+|..+..++|..+
T Consensus       209 vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  277 (280)
T 4da9_A          209 VFEVRPGIIRSDMTAAVSGKYDGLIESGLVPMRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGGLSI  277 (280)
T ss_dssp             EEEEEECCBCC----------------------CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTTCC-
T ss_pred             EEEEeecCCcCCchhhcchhHHHHHhhcCCCcCCcCCHHHHHHHHHHHhCccccCCCCCEEEECCCccc
Confidence            9999999999999876533222111111456778899999999999544322 2357999888887543

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.96  E-value=1e-29  Score=211.24  Aligned_cols=193  Identities=20%  Similarity=0.197  Sum_probs=158.1

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++++++.++|
T Consensus        69 ~~~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  142 (266)
T 4egf_A           69 GTDVHTVAIDLAEPDAPAELARRAAE------AFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGK  142 (266)
T ss_dssp             CCCEEEEECCTTSTTHHHHHHHHHHH------HHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCcEEEEEecCCCHHHHHHHHHHHHH------HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            45799999999999999999999998      5689999999999874  456778899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++++..++||++||..+.                    .+.+....|+++|++++.++++++.++.   +.+|+||+|
T Consensus       143 ~~~~~~~~g~iv~isS~~~~--------------------~~~~~~~~Y~asK~a~~~l~~~la~e~~---~~gI~vn~v  199 (266)
T 4egf_A          143 AMVAAGEGGAIITVASAAAL--------------------APLPDHYAYCTSKAGLVMATKVLARELG---PHGIRANSV  199 (266)
T ss_dssp             HHHHHTSCEEEEEECCGGGT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             HHHhcCCCeEEEEEcchhhc--------------------cCCCCChHHHHHHHHHHHHHHHHHHHHh---hhCeEEEEE
Confidence            99876546899999999873                    3566778899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchh-HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCccc
Q 024553          168 DPGVVKTNIMREVPS-FLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  231 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~  231 (266)
                      +||+|+|++...... ...........+++++.+|+|+|+.+++++.. +...+|..+..++|..+
T Consensus       200 ~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 4egf_A          200 CPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLASDAASMINGVDIPVDGGYTM  265 (266)
T ss_dssp             EESCBCSHHHHHHTCSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             EeCCCcCchhhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCcEEEECCCccC
Confidence            999999998654321 11112222234667888999999999965432 23568999888887643

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.96  E-value=5.3e-29  Score=209.97  Aligned_cols=192  Identities=16%  Similarity=0.112  Sum_probs=160.4

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC------CCCCcCCCcccchhhhhhhhhHHHHHHhh
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL------ATSSRLTPEGYDQMMSTNYIGAFFLTKLL   85 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~   85 (266)
                      .+.++.||+++.++++++++++.+      .++++|+||||||+.      .+..+.+.++|++++++|+.+++.+++.+
T Consensus        81 ~~~~~~~Dv~d~~~v~~~~~~~~~------~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~  154 (296)
T 3k31_A           81 VKLTVPCDVSDAESVDNMFKVLAE------EWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKA  154 (296)
T ss_dssp             CCEEEECCTTCHHHHHHHHHHHHH------HHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             CeEEEEcCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            368999999999999999999998      568999999999987      34567888999999999999999999999


Q ss_pred             HHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEE
Q 024553           86 LPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVI  165 (266)
Q Consensus        86 ~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~  165 (266)
                      +|+|++   .|+||++||..+.                    .+.+....|+++|+++..++++++.++.   +.+|+||
T Consensus       155 ~~~m~~---~g~IV~isS~~~~--------------------~~~~~~~~Y~asKaal~~l~~~la~e~~---~~gIrvn  208 (296)
T 3k31_A          155 EPLMTN---GGSILTLSYYGAE--------------------KVVPHYNVMGVCKAALEASVKYLAVDLG---KQQIRVN  208 (296)
T ss_dssp             GGGCTT---CEEEEEEECGGGT--------------------SCCTTTTHHHHHHHHHHHHHHHHHHHHH---TTTEEEE
T ss_pred             HHHhhc---CCEEEEEEehhhc--------------------cCCCCchhhHHHHHHHHHHHHHHHHHHh---hcCcEEE
Confidence            999976   5899999998873                    3566778899999999999999999998   7899999


Q ss_pred             EecCCcccCCccCcchhHHHH-HHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCccccCCc
Q 024553          166 AADPGVVKTNIMREVPSFLSL-MAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVNSSA  235 (266)
Q Consensus       166 ~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~~~~~  235 (266)
                      +|+||+|+|++.......... .......+++++.+|+|+|+.+++++.. +...+|..+..++|..+....
T Consensus       209 ~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~~~~~~  280 (296)
T 3k31_A          209 AISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLDDVGGAALYLLSDLGRGTTGETVHVDCGYHVVGMK  280 (296)
T ss_dssp             EEEECCCCCSSCCSCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCSSC
T ss_pred             EEEECCCcCchhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCccCCccCCEEEECCCccccCCc
Confidence            999999999998776443222 2223344678889999999999965432 235689999989998776443

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.96  E-value=7.3e-30  Score=212.36  Aligned_cols=188  Identities=20%  Similarity=0.262  Sum_probs=157.6

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++++++.++|
T Consensus        77 ~~~~~~~~~D~~d~~~v~~~~~~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  150 (269)
T 4dmm_A           77 GGEAFAVKADVSQESEVEALFAAVIE------RWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAK  150 (269)
T ss_dssp             TCCEEEEECCTTSHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            45789999999999999999999998      5689999999999873  456778899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++++ .|+||++||..+..                    +.++...|+++|++++.++++++.++.   +.+|+||+|
T Consensus       151 ~~~~~~-~g~iv~isS~~~~~--------------------~~~~~~~Y~asK~a~~~l~~~la~e~~---~~gi~vn~v  206 (269)
T 4dmm_A          151 IMLKQR-SGRIINIASVVGEM--------------------GNPGQANYSAAKAGVIGLTKTVAKELA---SRGITVNAV  206 (269)
T ss_dssp             HHHHHT-CCEEEEECCHHHHH--------------------CCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEE
T ss_pred             HHHHcC-CcEEEEECchhhcC--------------------CCCCchhHHHHHHHHHHHHHHHHHHHh---hhCcEEEEE
Confidence            998776 78999999988743                    456678899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC--CCcccceeecCCCccc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP--PETSGVYFFGGKGRTV  231 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~--~~~~G~~~~~~~g~~~  231 (266)
                      +||+|+|++......    .......+++++.+|+|+|+.+++++..+  ...+|..+..++|..+
T Consensus       207 ~PG~v~T~~~~~~~~----~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG~~~  268 (269)
T 4dmm_A          207 APGFIATDMTSELAA----EKLLEVIPLGRYGEAAEVAGVVRFLAADPAAAYITGQVINIDGGLVM  268 (269)
T ss_dssp             EECCBTTSCSCHHHH----HHHGGGCTTSSCBCHHHHHHHHHHHHHCGGGGGCCSCEEEESTTSCC
T ss_pred             EECCCcCcccccccH----HHHHhcCCCCCCCCHHHHHHHHHHHhCCcccCCCcCCEEEECCCeec
Confidence            999999999765432    11222345678889999999999665442  2457999988887543

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.96  E-value=2.8e-29  Score=209.06  Aligned_cols=189  Identities=21%  Similarity=0.226  Sum_probs=155.5

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCC----CCcCCCcccchhhhhhhhhHHHHHHhh
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT----SSRLTPEGYDQMMSTNYIGAFFLTKLL   85 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~   85 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..+    ..+.+.++|++++++|+.|++++++.+
T Consensus        56 ~~~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~  129 (271)
T 3tzq_B           56 GRGAVHHVVDLTNEVSVRALIDFTID------TFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYA  129 (271)
T ss_dssp             CTTCEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCeEEEECCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence            34688999999999999999999998      56899999999998632    347788999999999999999999999


Q ss_pred             HHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEE
Q 024553           86 LPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVI  165 (266)
Q Consensus        86 ~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~  165 (266)
                      +|+|++++ .++||++||..+.                    .+.++...|+++|++++.++++++.++.   +.+|+||
T Consensus       130 ~~~m~~~~-~g~iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gi~vn  185 (271)
T 3tzq_B          130 IPRLISAG-GGAIVNISSATAH--------------------AAYDMSTAYACTKAAIETLTRYVATQYG---RHGVRCN  185 (271)
T ss_dssp             HHHHHHTT-CEEEEEECCGGGT--------------------SBCSSCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEE
T ss_pred             HHHHHhcC-CCEEEEECCHHHc--------------------CCCCCChHHHHHHHHHHHHHHHHHHHHh---hcCEEEE
Confidence            99999877 7999999998873                    3566678999999999999999999997   7899999


Q ss_pred             EecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCC
Q 024553          166 AADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKG  228 (266)
Q Consensus       166 ~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g  228 (266)
                      +|+||+|+|++.................+++++.+|+|+|+.+++++... ...+|..+..++|
T Consensus       186 ~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  249 (271)
T 3tzq_B          186 AIAPGLVRTPRLEVGLPQPIVDIFATHHLAGRIGEPHEIAELVCFLASDRAAFITGQVIAADSG  249 (271)
T ss_dssp             EEEECCBCCTTTC---CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             EEEeCCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccCCcCCCEEEECCC
Confidence            99999999998763222222222233345678889999999999654322 3568999988888

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.96  E-value=1.4e-29  Score=212.18  Aligned_cols=193  Identities=22%  Similarity=0.240  Sum_probs=155.6

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC---CCCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+.   .+..+.+.++|++++++|+.|++.+++.++
T Consensus        76 ~~~~~~~~~Dv~d~~~v~~~~~~~~~------~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~  149 (283)
T 3v8b_A           76 GGQAIALEADVSDELQMRNAVRDLVL------KFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTV  149 (283)
T ss_dssp             TCCEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CCcEEEEEccCCCHHHHHHHHHHHHH------HhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            45799999999999999999999998      568999999999985   456788899999999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |+|++++ .++||++||..+..                  ..+.++...|+++|++++.++++++.+++   +.+|+||+
T Consensus       150 ~~m~~~~-~g~Iv~isS~~~~~------------------~~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~  207 (283)
T 3v8b_A          150 PYLKQRG-GGAIVVVSSINGTR------------------TFTTPGATAYTATKAAQVAIVQQLALELG---KHHIRVNA  207 (283)
T ss_dssp             HHHHHHT-CEEEEEECCSBTTT------------------BCCSTTCHHHHHHHHHHHHHHHHHHHHTT---TTTEEEEE
T ss_pred             HHHHHcC-CceEEEEcChhhcc------------------CCCCCCchHHHHHHHHHHHHHHHHHHHhC---ccCcEEEE
Confidence            9998876 78999999988632                  11456678899999999999999999998   78999999


Q ss_pred             ecCCcccCCccCcchhHHHHHH------HHHHHHh--hcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCcc
Q 024553          167 ADPGVVKTNIMREVPSFLSLMA------FTVLKLL--GLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  230 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~~~~~~~------~~~~~~~--~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~  230 (266)
                      |+||+|+|++............      .....++  +++.+|+|+|+.+++++.. +...+|..+..++|..
T Consensus       208 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~  280 (283)
T 3v8b_A          208 VCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSERARHVTGSPVWIDGGQG  280 (283)
T ss_dssp             EEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHH
T ss_pred             EEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHHHHHHHHcCccccCCcCCEEEECcCcc
Confidence            9999999999875421111100      0011233  6788999999999954321 1345799988888754

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.96  E-value=2.5e-29  Score=210.50  Aligned_cols=191  Identities=14%  Similarity=0.152  Sum_probs=159.0

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC---CCCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      ++.++.||+++.++++++++++.+      .++++|+||||||+.   .+..+.+.++|++++++|+.|++++++.++|.
T Consensus        64 ~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~  137 (281)
T 3svt_A           64 AIRYEPTDITNEDETARAVDAVTA------WHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAARE  137 (281)
T ss_dssp             EEEEEECCTTSHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEeCCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            799999999999999999999998      568999999999984   35567888999999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |++++ .|+||++||..+..                    +.+....|++||++++.++++++.++.   +++|+||+|+
T Consensus       138 ~~~~~-~g~iv~isS~~~~~--------------------~~~~~~~Y~asK~a~~~l~~~la~e~~---~~gi~vn~v~  193 (281)
T 3svt_A          138 MVRGG-GGSFVGISSIAASN--------------------THRWFGAYGVTKSAVDHLMQLAADELG---ASWVRVNSIR  193 (281)
T ss_dssp             HHHTT-CEEEEEECCHHHHS--------------------CCTTCTHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEE
T ss_pred             HHhcC-CcEEEEEeCHHHcC--------------------CCCCChhHHHHHHHHHHHHHHHHHHhh---hcCeEEEEEE
Confidence            98877 88999999988743                    456677899999999999999999997   7899999999


Q ss_pred             CCcccCCccCcchhH-HHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCcccc
Q 024553          169 PGVVKTNIMREVPSF-LSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  232 (266)
Q Consensus       169 PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~~  232 (266)
                      ||+|+|++....... ..........+++++.+|+|+|+.+++++... ...+|..+..++|....
T Consensus       194 PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~  259 (281)
T 3svt_A          194 PGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLR  259 (281)
T ss_dssp             ECSBCSGGGHHHHTCHHHHHHHHHHCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred             eCcCcCcchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcc
Confidence            999999987653221 11222233446678889999999999654322 34579999988888765

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.96  E-value=4.3e-29  Score=208.55  Aligned_cols=192  Identities=19%  Similarity=0.273  Sum_probs=157.3

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++++++.++|
T Consensus        72 ~~~~~~~~~Dv~d~~~v~~~~~~~~~------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~  145 (277)
T 4dqx_A           72 GSKAFGVRVDVSSAKDAESMVEKTTA------KWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIP  145 (277)
T ss_dssp             CTTEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCceEEEEecCCCHHHHHHHHHHHHH------HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            35789999999999999999999998      5689999999999863  456788899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++++ .|+||++||..+.                    .+.++...|++||++++.++++++.++.   +.+|+||+|
T Consensus       146 ~~~~~~-~g~iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gi~vn~v  201 (277)
T 4dqx_A          146 VMRRNG-GGSIINTTSYTAT--------------------SAIADRTAYVASKGAISSLTRAMAMDHA---KEGIRVNAV  201 (277)
T ss_dssp             HHTTTT-CEEEEEECCGGGT--------------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             HHHHcC-CcEEEEECchhhC--------------------cCCCCChhHHHHHHHHHHHHHHHHHHhh---hcCeEEEEE
Confidence            999877 7899999998873                    3566778999999999999999999997   789999999


Q ss_pred             cCCcccCCccCcch-----hHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCccc
Q 024553          168 DPGVVKTNIMREVP-----SFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  231 (266)
Q Consensus       168 ~PG~v~T~~~~~~~-----~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~  231 (266)
                      +||+|+|++.....     ............+++++.+|+|+|+.+++++... ...+|..+..++|..+
T Consensus       202 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  271 (277)
T 4dqx_A          202 APGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLASDRSRFATGSILTVDGGSSI  271 (277)
T ss_dssp             EECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSSS
T ss_pred             eeCcCcCchhhhhcccccchhHHHHHHHhcCcccCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCchhh
Confidence            99999999843211     1111111222345678889999999999655322 3458999988888655

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.96  E-value=2.4e-29  Score=208.76  Aligned_cols=190  Identities=21%  Similarity=0.191  Sum_probs=156.1

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC---CCCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||..   .+..+.+.++|++++++|+.+++++++.++
T Consensus        59 ~~~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~  132 (264)
T 3ucx_A           59 GRRALSVGTDITDDAQVAHLVDETMK------AYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFT  132 (264)
T ss_dssp             TCCEEEEECCTTCHHHHHHHHHHHHH------HTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTH
T ss_pred             CCcEEEEEcCCCCHHHHHHHHHHHHH------HcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            45799999999999999999999998      678999999999985   345678889999999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |.|++++  |+||++||..+.                    .+.+....|+++|++++.++++++.++.   +.+|+||+
T Consensus       133 ~~~~~~~--g~iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~vn~  187 (264)
T 3ucx_A          133 PALEESK--GAVVNVNSMVVR--------------------HSQAKYGAYKMAKSALLAMSQTLATELG---EKGIRVNS  187 (264)
T ss_dssp             HHHHHHT--CEEEEECCGGGG--------------------CCCTTCHHHHHHHHHHHHHHHHHHHHHH---TTTCEEEE
T ss_pred             HHHHHcC--CEEEEECcchhc--------------------cCCCccHHHHHHHHHHHHHHHHHHHHhC---ccCeEEEE
Confidence            9998753  899999999873                    3566778999999999999999999998   78999999


Q ss_pred             ecCCcccCCccCcchhHH----------HHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCcc
Q 024553          167 ADPGVVKTNIMREVPSFL----------SLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  230 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~~~----------~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~  230 (266)
                      |+||+|+|++........          .........+++++.+|+|+|+.+++++.. +...+|..+..++|..
T Consensus       188 v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  262 (264)
T 3ucx_A          188 VLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMASDLASGITGQALDVNCGEY  262 (264)
T ss_dssp             EEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             EecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence            999999999875532211          111112223567788999999999955432 2356899998888864

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.96  E-value=6.7e-29  Score=207.85  Aligned_cols=193  Identities=21%  Similarity=0.241  Sum_probs=155.6

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++.+++.++|
T Consensus        70 ~~~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  143 (281)
T 3s55_A           70 GRRCISAKVDVKDRAALESFVAEAED------TLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAP  143 (281)
T ss_dssp             TCCEEEEECCTTCHHHHHHHHHHHHH------HHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCeEEEEeCCCCCHHHHHHHHHHHHH------hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            45799999999999999999999998      5689999999999873  456788999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++++ .|+||++||..+..                    +.++...|+++|++++.++++++.++.   +.+|+||+|
T Consensus       144 ~~~~~~-~g~iv~isS~~~~~--------------------~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~vn~v  199 (281)
T 3s55_A          144 GMIKRN-YGRIVTVSSMLGHS--------------------ANFAQASYVSSKWGVIGLTKCAAHDLV---GYGITVNAV  199 (281)
T ss_dssp             HHHHHT-CEEEEEECCGGGGS--------------------CCTTCHHHHHHHHHHHHHHHHHHHHTG---GGTEEEEEE
T ss_pred             HHHHcC-CCEEEEECChhhcC--------------------CCCCCchhHHHHHHHHHHHHHHHHHHh---hcCcEEEEE
Confidence            998776 78999999988743                    556678899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhH-----------H-HHHH-H-HHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCcccc
Q 024553          168 DPGVVKTNIMREVPSF-----------L-SLMA-F-TVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  232 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~-----------~-~~~~-~-~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~~  232 (266)
                      +||+|+|++.......           . .... . ......+++.+|+|+|+.+++++... ...+|..+..++|..+.
T Consensus       200 ~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~  279 (281)
T 3s55_A          200 APGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR  279 (281)
T ss_dssp             EECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             ecCcccCccccchhhhccccccccccchhHHHHHHHhhhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence            9999999987642100           0 0000 0 00011156789999999999654332 34679999888887653

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.96  E-value=2.8e-29  Score=209.59  Aligned_cols=193  Identities=17%  Similarity=0.249  Sum_probs=157.1

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++++++.++|
T Consensus        80 ~~~~~~~~~Dl~d~~~v~~~~~~~~~------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  153 (276)
T 3r1i_A           80 GGKALPIRCDVTQPDQVRGMLDQMTG------ELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAAR  153 (276)
T ss_dssp             TCCCEEEECCTTCHHHHHHHHHHHHH------HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCeEEEEEcCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34788999999999999999999998      5689999999999874  456778999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++++.+++||++||..+...                  ...+....|++||++++.++++++.++.   +.+|+||+|
T Consensus       154 ~m~~~~~~g~iv~isS~~~~~~------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gIrvn~v  212 (276)
T 3r1i_A          154 AMVDQGLGGTIITTASMSGHII------------------NIPQQVSHYCTSKAAVVHLTKAMAVELA---PHQIRVNSV  212 (276)
T ss_dssp             HHHHHTSCEEEEEECCGGGTSC------------------CCSSCCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             HHHHcCCCcEEEEECchHhccc------------------CCCCCcchHHHHHHHHHHHHHHHHHHHh---hcCcEEEEE
Confidence            9987653589999999886431                  1123457899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCccc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  231 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~  231 (266)
                      +||+|+|++.........  ......+++++.+|+|+|+.+++++.. +...+|..+..++|...
T Consensus       213 ~PG~v~T~~~~~~~~~~~--~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~  275 (276)
T 3r1i_A          213 SPGYIRTELVEPLADYHA--LWEPKIPLGRMGRPEELTGLYLYLASAASSYMTGSDIVIDGGYTC  275 (276)
T ss_dssp             EECCBCSTTTGGGGGGHH--HHGGGSTTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             eeCCCcCCccccchHHHH--HHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCcEEEECcCccC
Confidence            999999999876543221  122234567888999999999955432 23568999888887643

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.96  E-value=5.8e-29  Score=207.34  Aligned_cols=191  Identities=20%  Similarity=0.227  Sum_probs=156.7

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++.+.+.+       ++++|+||||||+..  +..+.+.++|++++++|+.|++++++.++|
T Consensus        78 ~~~~~~~~~Dv~d~~~v~~~~~~~~~-------~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  150 (273)
T 3uf0_A           78 GGSAEAVVADLADLEGAANVAEELAA-------TRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGT  150 (273)
T ss_dssp             TCEEEEEECCTTCHHHHHHHHHHHHH-------HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCcEEEEEecCCCHHHHHHHHHHHHh-------cCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            45799999999999999999666654       478999999999873  456778999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++++ .|+||++||..+.                    .+.++...|+++|++++.++++++.++.   +.+|+||+|
T Consensus       151 ~m~~~~-~g~IV~isS~~~~--------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v  206 (273)
T 3uf0_A          151 AMLAHG-SGRIVTIASMLSF--------------------QGGRNVAAYAASKHAVVGLTRALASEWA---GRGVGVNAL  206 (273)
T ss_dssp             HHHHHT-CEEEEEECCGGGT--------------------SCCSSCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             HHHhcC-CCEEEEEcchHhc--------------------CCCCCChhHHHHHHHHHHHHHHHHHHHh---hcCcEEEEE
Confidence            998876 7899999999873                    3566778999999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhH-HHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCccc
Q 024553          168 DPGVVKTNIMREVPSF-LSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  231 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~  231 (266)
                      +||+|.|++....... ..........+++++.+|+|+|+.+++++.. +...+|..+..++|...
T Consensus       207 ~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~a~~itG~~i~vdGG~~~  272 (273)
T 3uf0_A          207 APGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASDAASYVHGQVLAVDGGWLA  272 (273)
T ss_dssp             EECSBCSGGGHHHHTSHHHHHHHHHHSTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             EeCCCcCCchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECcCccC
Confidence            9999999987653221 1122223344677889999999999965432 23568999988888643

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.96  E-value=1.1e-29  Score=211.48  Aligned_cols=190  Identities=24%  Similarity=0.304  Sum_probs=157.6

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++++++.++|
T Consensus        76 ~~~~~~~~~Dv~d~~~v~~~~~~~~~------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  149 (270)
T 3ftp_A           76 GLEGRGAVLNVNDATAVDALVESTLK------EFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLR  149 (270)
T ss_dssp             TCCCEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCcEEEEEEeCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            34688999999999999999999998      5689999999999873  456778899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++++ .|+||++||..+..                    +.++...|+++|++++.++++++.++.   +.+|+||+|
T Consensus       150 ~~~~~~-~g~iv~isS~~~~~--------------------~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v  205 (270)
T 3ftp_A          150 PMMKAR-GGRIVNITSVVGSA--------------------GNPGQVNYAAAKAGVAGMTRALAREIG---SRGITVNCV  205 (270)
T ss_dssp             HHHHHT-CEEEEEECCHHHHH--------------------CCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             HHHHcC-CCEEEEECchhhCC--------------------CCCCchhHHHHHHHHHHHHHHHHHHHh---hhCeEEEEE
Confidence            998776 79999999988743                    566778899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCcc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  230 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~  230 (266)
                      +||+|+|++........ ........+++++.+|+|+|+.+++++.. ....+|..+..++|..
T Consensus       206 ~PG~v~T~~~~~~~~~~-~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  268 (270)
T 3ftp_A          206 APGFIDTDMTKGLPQEQ-QTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGTTLHVNGGMF  268 (270)
T ss_dssp             EECSBCSHHHHHSCHHH-HHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             EeCCCcCcchhhcCHHH-HHHHHhcCCCCCCCCHHHHHHHHHHHhCCCcCCccCcEEEECCCcc
Confidence            99999999876554322 11122234567788999999999965432 2355899998888764

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.96  E-value=8.6e-29  Score=208.97  Aligned_cols=192  Identities=19%  Similarity=0.218  Sum_probs=154.9

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC---CCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..   +..+.+.++|++++++|+.|++++++.++
T Consensus        88 ~~~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~  161 (299)
T 3t7c_A           88 GRRIIASQVDVRDFDAMQAAVDDGVT------QLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAI  161 (299)
T ss_dssp             TCCEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CCceEEEECCCCCHHHHHHHHHHHHH------HhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            45799999999999999999999998      5589999999999873   25677899999999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |.|.+++..|+||++||..+.                    .+.+....|+++|+++..++++++.++.   +.+|+||+
T Consensus       162 ~~~~~~~~~g~Iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~  218 (299)
T 3t7c_A          162 PHIMAGKRGGSIVFTSSIGGL--------------------RGAENIGNYIASKHGLHGLMRTMALELG---PRNIRVNI  218 (299)
T ss_dssp             HHHHHTTSCEEEEEECCGGGT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEE
T ss_pred             HHHHhcCCCcEEEEECChhhc--------------------cCCCCcchHHHHHHHHHHHHHHHHHHhc---ccCcEEEE
Confidence            998776547899999999873                    3566778999999999999999999997   78999999


Q ss_pred             ecCCcccCCccCcchhHH------------HHHH---HHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCcc
Q 024553          167 ADPGVVKTNIMREVPSFL------------SLMA---FTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  230 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~~~------------~~~~---~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~  230 (266)
                      |+||+|+|++........            ....   .....+ +++.+|+|+|+.+++++.. +...+|..+..++|..
T Consensus       219 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~  297 (299)
T 3t7c_A          219 VCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLP-IPYVEPADISNAILFLVSDDARYITGVSLPVDGGAL  297 (299)
T ss_dssp             EEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             EecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhcccC-cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCcc
Confidence            999999999976522110            0000   000011 4677999999999955432 2346799998888865


Q ss_pred             c
Q 024553          231 V  231 (266)
Q Consensus       231 ~  231 (266)
                      +
T Consensus       298 l  298 (299)
T 3t7c_A          298 L  298 (299)
T ss_dssp             G
T ss_pred             c
Confidence            3

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.96  E-value=2e-29  Score=210.89  Aligned_cols=189  Identities=22%  Similarity=0.211  Sum_probs=155.1

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++++++.++|
T Consensus        72 ~~~~~~~~~Dv~d~~~v~~~~~~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  145 (279)
T 3sju_A           72 GHDVDGSSCDVTSTDEVHAAVAAAVE------RFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLR  145 (279)
T ss_dssp             TCCEEEEECCTTCHHHHHHHHHHHHH------HHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCCCHHHHHHHHHHHHH------HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhc
Confidence            45799999999999999999999998      5689999999999873  456778899999999999999999999999


Q ss_pred             --HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEE
Q 024553           88 --LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVI  165 (266)
Q Consensus        88 --~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~  165 (266)
                        .|++++ .|+||++||..+.                    .+.++...|+++|++++.++++++.++.   +.+|+||
T Consensus       146 ~~~~~~~~-~g~iV~isS~~~~--------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gi~vn  201 (279)
T 3sju_A          146 AGGMREAG-WGRIVNIASTGGK--------------------QGVMYAAPYTASKHGVVGFTKSVGFELA---KTGITVN  201 (279)
T ss_dssp             HSSHHHHT-CEEEEEECCGGGT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHTG---GGTEEEE
T ss_pred             hhhHhhcC-CcEEEEECChhhc--------------------cCCCCChhHHHHHHHHHHHHHHHHHHHH---hhCcEEE
Confidence              577665 7899999999873                    3566778899999999999999999997   7899999


Q ss_pred             EecCCcccCCccCcch----------hHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC---CcccceeecCCCcc
Q 024553          166 AADPGVVKTNIMREVP----------SFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRT  230 (266)
Q Consensus       166 ~v~PG~v~T~~~~~~~----------~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~---~~~G~~~~~~~g~~  230 (266)
                      +|+||+|+|++.....          ............+++++.+|+|+|+.+++  +.++   ..+|..+..++|..
T Consensus       202 ~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~--L~s~~a~~itG~~i~vdGG~~  277 (279)
T 3sju_A          202 AVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGY--LVTDAAASITAQALNVCGGLG  277 (279)
T ss_dssp             EEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCHHHHHHHHHH--HTSSGGGGCCSCEEEESTTCC
T ss_pred             EEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHH--HhCccccCcCCcEEEECCCcc
Confidence            9999999999865421          11112222233466788899999999994  4443   35799988887754

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.96  E-value=2.4e-29  Score=210.58  Aligned_cols=191  Identities=16%  Similarity=0.167  Sum_probs=150.6

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++.+++.++|
T Consensus        75 ~~~~~~~~~Dv~d~~~v~~~~~~~~~------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  148 (281)
T 3v2h_A           75 SGTVLHHPADMTKPSEIADMMAMVAD------RFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIP  148 (281)
T ss_dssp             SSCEEEECCCTTCHHHHHHHHHHHHH------HTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCcEEEEeCCCCCHHHHHHHHHHHHH------HCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            46799999999999999999999998      6689999999999863  455778899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++++ .|+||++||..+.                    .+.+....|+++|++++.++++++.++.   +.+|+||+|
T Consensus       149 ~~~~~~-~g~iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v  204 (281)
T 3v2h_A          149 PMKKKG-WGRIINIASAHGL--------------------VASPFKSAYVAAKHGIMGLTKTVALEVA---ESGVTVNSI  204 (281)
T ss_dssp             HHHHHT-CEEEEEECCGGGT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             HHHHcC-CCEEEEECCcccc--------------------cCCCCchHHHHHHHHHHHHHHHHHHHhh---hcCcEEEEE
Confidence            998876 7899999998873                    3566678999999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHH-----------HHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCcc
Q 024553          168 DPGVVKTNIMREVPSFLSL-----------MAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  230 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~-----------~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~  230 (266)
                      +||+|+|++.....+....           .......+.+++.+|+|+|+.+++++... ...+|..+..++|..
T Consensus       205 ~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG~~  279 (281)
T 3v2h_A          205 CPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLALYLAGDDAAQITGTHVSMDGGWT  279 (281)
T ss_dssp             EECSBCC----------------------------CCTTCSCBCHHHHHHHHHHHHSSGGGGCCSCEEEESTTGG
T ss_pred             ECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHcCCCcCCCCCcEEEECCCcc
Confidence            9999999987653221100           00112235677889999999999544321 235799988887753

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.96  E-value=5e-29  Score=208.11  Aligned_cols=192  Identities=21%  Similarity=0.240  Sum_probs=158.3

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++.+++.++|
T Consensus        74 ~~~~~~~~~Dv~d~~~v~~~~~~~~~------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  147 (277)
T 3gvc_A           74 GCGAAACRVDVSDEQQIIAMVDACVA------AFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAP  147 (277)
T ss_dssp             CSSCEEEECCTTCHHHHHHHHHHHHH------HHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcceEEEecCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            34688999999999999999999998      5689999999999873  456788999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++++ .|+||++||..+.                    .+.++...|+++|++++.++++++.++.   +.+|+||+|
T Consensus       148 ~m~~~~-~g~Iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v  203 (277)
T 3gvc_A          148 RMIERG-GGAIVNLSSLAGQ--------------------VAVGGTGAYGMSKAGIIQLSRITAAELR---SSGIRSNTL  203 (277)
T ss_dssp             HHHHTT-CEEEEEECCGGGT--------------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             HHHhcC-CcEEEEEcchhhc--------------------cCCCCchhHHHHHHHHHHHHHHHHHHhc---ccCeEEEEE
Confidence            998877 7999999998873                    3567778999999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchh----HH--HHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCccc
Q 024553          168 DPGVVKTNIMREVPS----FL--SLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  231 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~----~~--~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~  231 (266)
                      +||+|+|++......    ..  .........+.+++.+|+|+|+.+++++.. +...+|..+..++|...
T Consensus       204 ~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~  274 (277)
T 3gvc_A          204 LPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDASMITGTTQIADGGTIA  274 (277)
T ss_dssp             EECSBCCHHHHHHHTCC------CCHHHHHHHHHSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             eeCCccCchHHHhhhcchhhHHHHhhhhhhhccccCCCCHHHHHHHHHHHcCCccCCccCcEEEECCcchh
Confidence            999999998654221    00  011112245677889999999999965432 23568999988888755

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.96  E-value=3.2e-29  Score=207.44  Aligned_cols=191  Identities=21%  Similarity=0.189  Sum_probs=145.4

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC---CCCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||..   .+..+.+.++|++++++|+.|++++++.++
T Consensus        57 ~~~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~  130 (259)
T 3edm_A           57 GRSALAIKADLTNAAEVEAAISAAAD------KFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTAL  130 (259)
T ss_dssp             TSCCEEEECCTTCHHHHHHHHHHHHH------HHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred             CCceEEEEcCCCCHHHHHHHHHHHHH------HhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45789999999999999999999998      568999999999976   345678899999999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |.|++   .|+||++||..+..                   .+.++...|+++|++++.++++++.+++   +. |+||+
T Consensus       131 ~~~~~---~g~iv~isS~~~~~-------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~-I~vn~  184 (259)
T 3edm_A          131 PKMAK---GGAIVTFSSQAGRD-------------------GGGPGALAYATSKGAVMTFTRGLAKEVG---PK-IRVNA  184 (259)
T ss_dssp             GGEEE---EEEEEEECCHHHHH-------------------CCSTTCHHHHHHHHHHHHHHHHHHHHHT---TT-CEEEE
T ss_pred             HHHhc---CCEEEEEcCHHhcc-------------------CCCCCcHHHHHHHHHHHHHHHHHHHHHC---CC-CEEEE
Confidence            99977   57999999988641                   2456678899999999999999999996   44 99999


Q ss_pred             ecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCcccc
Q 024553          167 ADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  232 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~~  232 (266)
                      |+||+|+|++.................+++++.+|+|+|+.+++++... ...+|..+..++|....
T Consensus       185 v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGg~~~~  251 (259)
T 3edm_A          185 VCPGMISTTFHDTFTKPEVRERVAGATSLKREGSSEDVAGLVAFLASDDAAYVTGACYDINGGVLFS  251 (259)
T ss_dssp             EEECCBCC----------------------CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESBCSSBC
T ss_pred             EEECCCcCcccccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEECCCcCCC
Confidence            9999999999876543222222333456778889999999999554322 34589999988776543

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.96  E-value=2e-29  Score=211.59  Aligned_cols=198  Identities=21%  Similarity=0.256  Sum_probs=155.1

Q ss_pred             hcccCCCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC---CCCcCCCcccchhhhhhhhhHHH
Q 024553            4 ITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFF   80 (266)
Q Consensus         4 i~~~~~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~---~~~~~~~~~~~~~~~~n~~~~~~   80 (266)
                      +...+++.++.++.||+++.++++++++++.+      .++++|+||||||+..   +..+.+.++|++++++|+.|++.
T Consensus        80 l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~------~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~  153 (287)
T 3rku_A           80 IDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ------EFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALIN  153 (287)
T ss_dssp             HHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG------GGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHH
T ss_pred             HHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH------hcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHH
Confidence            44445567899999999999999999999988      6689999999999763   45677899999999999999999


Q ss_pred             HHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCC
Q 024553           81 LTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSR  160 (266)
Q Consensus        81 l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~  160 (266)
                      +++.++|+|++++ .|+||++||..+.                    .+.++...|+++|+++..++++++.++.   ++
T Consensus       154 l~~~~~~~m~~~~-~g~IV~isS~~~~--------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~  209 (287)
T 3rku_A          154 ITQAVLPIFQAKN-SGDIVNLGSIAGR--------------------DAYPTGSIYCASKFAVGAFTDSLRKELI---NT  209 (287)
T ss_dssp             HHHHHHHHHHHHT-CCEEEEECCGGGT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHTT---TS
T ss_pred             HHHHHHHHHHhcC-CCeEEEECChhhc--------------------CCCCCCchHHHHHHHHHHHHHHHHHHhh---hc
Confidence            9999999998776 7999999999873                    3567778999999999999999999998   88


Q ss_pred             CeEEEEecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC-CcccceeecCCCcccc
Q 024553          161 HVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRTVN  232 (266)
Q Consensus       161 ~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~-~~~G~~~~~~~g~~~~  232 (266)
                      +|+||+|+||+|+|++............ ..........+|+|+|+.+++++.... ..+|..+..++|+..+
T Consensus       210 gIrvn~v~PG~v~T~~~~~~~~~~~~~~-~~~~~~~~p~~pedvA~~v~~l~s~~~~~i~g~~i~v~~g~~~p  281 (287)
T 3rku_A          210 KIRVILIAPGLVETEFSLVRYRGNEEQA-KNVYKDTTPLMADDVADLIVYATSRKQNTVIADTLIFPTNQASP  281 (287)
T ss_dssp             SCEEEEEEESCEESSHHHHHTTTCHHHH-HHHHTTSCCEEHHHHHHHHHHHHTSCTTEEEEEEEEEETTEEET
T ss_pred             CCEEEEEeCCcCcCccccccccCcHHHH-HHhhcccCCCCHHHHHHHHHHHhCCCCCeEecceEEeeCCCCCC
Confidence            9999999999999998532111000000 000111123489999999996554332 3357777767777654

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.96  E-value=1.1e-28  Score=207.60  Aligned_cols=190  Identities=15%  Similarity=0.124  Sum_probs=154.6

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC------CCCcCCCcccchhhhhhhhhHHHHHHhh
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLL   85 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~------~~~~~~~~~~~~~~~~n~~~~~~l~~~~   85 (266)
                      ++.++.||+++.++++++++++.+      .++++|+||||||+..      +..+.+.++|++++++|+.+++.+++.+
T Consensus        82 ~~~~~~~Dv~d~~~v~~~~~~~~~------~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~  155 (293)
T 3grk_A           82 AFVAGHCDVADAASIDAVFETLEK------KWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRA  155 (293)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHH------HTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             CceEEECCCCCHHHHHHHHHHHHH------hcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHH
Confidence            588999999999999999999998      6689999999999863      4567788999999999999999999999


Q ss_pred             HHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEE
Q 024553           86 LPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVI  165 (266)
Q Consensus        86 ~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~  165 (266)
                      +|+|++   .|+||++||..+.                    .+.+....|++||++++.++++++.++.   +.+|+||
T Consensus       156 ~~~m~~---~g~Iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn  209 (293)
T 3grk_A          156 EKLMAD---GGSILTLTYYGAE--------------------KVMPNYNVMGVAKAALEASVKYLAVDLG---PQNIRVN  209 (293)
T ss_dssp             HHHTTT---CEEEEEEECGGGT--------------------SBCTTTTHHHHHHHHHHHHHHHHHHHHG---GGTEEEE
T ss_pred             HHhccC---CCEEEEEeehhhc--------------------cCCCchHHHHHHHHHHHHHHHHHHHHHh---HhCCEEE
Confidence            999976   6899999998873                    3566778899999999999999999997   7899999


Q ss_pred             EecCCcccCCccCcchhHHH-HHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCccccC
Q 024553          166 AADPGVVKTNIMREVPSFLS-LMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVNS  233 (266)
Q Consensus       166 ~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~~~  233 (266)
                      +|+||+|+|++......... ........+++++.+|+|+|+.+++++.. +...+|..+..++|..+..
T Consensus       210 ~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~~  279 (293)
T 3grk_A          210 AISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSGYHVIG  279 (293)
T ss_dssp             EEEECCCCC------CCHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred             EEecCCCcchhhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCCcceEEEECCCcccCC
Confidence            99999999998776433221 22223345677889999999999965432 2356899999888877653

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.96  E-value=6.7e-29  Score=206.54  Aligned_cols=194  Identities=17%  Similarity=0.119  Sum_probs=156.0

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC------CCCc-CCCcccchhhhhhhhhHHHHHHh
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA------TSSR-LTPEGYDQMMSTNYIGAFFLTKL   84 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~------~~~~-~~~~~~~~~~~~n~~~~~~l~~~   84 (266)
                      .+.++.||+++.++++++++++.+      .++++|+||||||+..      +..+ .+.++|++++++|+.+++.+++.
T Consensus        65 ~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~  138 (271)
T 3ek2_A           65 SELVFPCDVADDAQIDALFASLKT------HWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKA  138 (271)
T ss_dssp             CCCEEECCTTCHHHHHHHHHHHHH------HCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHH
T ss_pred             CcEEEECCCCCHHHHHHHHHHHHH------HcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHH
Confidence            478999999999999999999998      6789999999999863      2334 78899999999999999999999


Q ss_pred             hHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEE
Q 024553           85 LLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSV  164 (266)
Q Consensus        85 ~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v  164 (266)
                      ++|+|++   .++||++||..+.                    .+.+....|+++|+++..++++++.++.   +.+|+|
T Consensus       139 ~~~~~~~---~g~iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~v  192 (271)
T 3ek2_A          139 ALPMLSD---DASLLTLSYLGAE--------------------RAIPNYNTMGLAKAALEASVRYLAVSLG---AKGVRV  192 (271)
T ss_dssp             HGGGEEE---EEEEEEEECGGGT--------------------SBCTTTTHHHHHHHHHHHHHHHHHHHHH---TTTCEE
T ss_pred             HHHHhcc---CceEEEEeccccc--------------------cCCCCccchhHHHHHHHHHHHHHHHHHH---hcCcEE
Confidence            9999986   5799999998873                    3566778899999999999999999997   789999


Q ss_pred             EEecCCcccCCccCcchhHHHH-HHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCccccCCccc
Q 024553          165 IAADPGVVKTNIMREVPSFLSL-MAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVNSSALS  237 (266)
Q Consensus       165 ~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~~~~~~~  237 (266)
                      ++|+||+|+|++.......... .......+++++.+|+++|+.+++++.. +...+|..+..++|.........
T Consensus       193 ~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~~  267 (271)
T 3ek2_A          193 NAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGMA  267 (271)
T ss_dssp             EEEEECCC-----CCCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC-
T ss_pred             EEEecCcccchhhhcccchHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcccCCeeeeEEEECCCeeeehhhhh
Confidence            9999999999998876443222 2233344667888999999999965543 24568999999999877665543

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.96  E-value=9.8e-29  Score=204.56  Aligned_cols=188  Identities=19%  Similarity=0.206  Sum_probs=156.5

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++.+++.++|.
T Consensus        68 ~~~~~~~~Dv~d~~~v~~~~~~~~~------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  141 (260)
T 3un1_A           68 PDIHTVAGDISKPETADRIVREGIE------RFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAE  141 (260)
T ss_dssp             TTEEEEESCTTSHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CceEEEEccCCCHHHHHHHHHHHHH------HCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            3689999999999999999999998      5589999999999873  4567788999999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |++++ .++||++||..+..                  ..+..+...|++||++++.++++++.++.   +.+|+||+|+
T Consensus       142 m~~~~-~g~iv~isS~~~~~------------------~~~~~~~~~Y~~sKaa~~~l~~~la~e~~---~~gI~vn~v~  199 (260)
T 3un1_A          142 MLKQG-SGHIVSITTSLVDQ------------------PMVGMPSALASLTKGGLNAVTRSLAMEFS---RSGVRVNAVS  199 (260)
T ss_dssp             HHHTT-CEEEEEECCTTTTS------------------CBTTCCCHHHHHHHHHHHHHHHHHHHHTT---TTTEEEEEEE
T ss_pred             HHHcC-CcEEEEEechhhcc------------------CCCCCccHHHHHHHHHHHHHHHHHHHHhC---cCCeEEEEEe
Confidence            99877 79999999987532                  11334457899999999999999999998   7899999999


Q ss_pred             CCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCccc
Q 024553          169 PGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  231 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~  231 (266)
                      ||+|+|++......    .......+++++.+|+|+|++++++ ..+...+|..+..++|...
T Consensus       200 PG~v~t~~~~~~~~----~~~~~~~p~~r~~~~~dva~av~~L-~~~~~itG~~i~vdGG~~~  257 (260)
T 3un1_A          200 PGVIKTPMHPAETH----STLAGLHPVGRMGEIRDVVDAVLYL-EHAGFITGEILHVDGGQNA  257 (260)
T ss_dssp             ECCBCCTTSCGGGH----HHHHTTSTTSSCBCHHHHHHHHHHH-HHCTTCCSCEEEESTTGGG
T ss_pred             ecCCCCCCCCHHHH----HHHhccCCCCCCcCHHHHHHHHHHh-cccCCCCCcEEEECCCeec
Confidence            99999998754211    1112234667888999999999976 4555678999988888654

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.96  E-value=2.1e-29  Score=209.22  Aligned_cols=190  Identities=22%  Similarity=0.260  Sum_probs=151.9

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++.+++.++|
T Consensus        72 ~~~~~~~~~Dv~d~~~v~~~~~~~~~------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  145 (266)
T 3grp_A           72 GKDVFVFSANLSDRKSIKQLAEVAER------EMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIH  145 (266)
T ss_dssp             CSSEEEEECCTTSHHHHHHHHHHHHH------HHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCceEEEEeecCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34789999999999999999999998      5589999999999873  456778899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++++ .++||++||..+.                    .+.++...|+++|++++.++++++.++.   +.+|+||+|
T Consensus       146 ~~~~~~-~g~Iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gI~vn~v  201 (266)
T 3grp_A          146 SMMRRR-YGRIINITSIVGV--------------------VGNPGQTNYCAAKAGLIGFSKALAQEIA---SRNITVNCI  201 (266)
T ss_dssp             HHHHHT-CEEEEEECCC---------------------------CHHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             HHHHcC-CcEEEEECCHHHc--------------------CCCCCchhHHHHHHHHHHHHHHHHHHhh---hhCcEEEEE
Confidence            998776 7899999998873                    3556778999999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCcc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  230 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~  230 (266)
                      +||+|+|++.....+.. ........+++++.+|+|+|+.+++++... ...+|..+..++|..
T Consensus       202 ~PG~v~t~~~~~~~~~~-~~~~~~~~p~~r~~~~edvA~~v~~L~s~~~~~itG~~i~vdGG~~  264 (266)
T 3grp_A          202 APGFIKSAMTDKLNEKQ-KEAIMAMIPMKRMGIGEEIAFATVYLASDEAAYLTGQTLHINGGMA  264 (266)
T ss_dssp             EECSBCSHHHHTCCHHH-HHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC-
T ss_pred             eeCcCCCchhhccCHHH-HHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCee
Confidence            99999999876654322 122223346678889999999999554322 345799988887753

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.96  E-value=1.7e-29  Score=208.77  Aligned_cols=195  Identities=16%  Similarity=0.178  Sum_probs=154.6

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+.  .+..+.+.++|++++++|+.|++++++.++|
T Consensus        54 ~~~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~  127 (257)
T 3imf_A           54 PGQILTVQMDVRNTDDIQKMIEQIDE------KFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGK  127 (257)
T ss_dssp             TTCEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEEccCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            45799999999999999999999998      568999999999986  3556788999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|.+++..++||++||..+.                    .+.++...|+++|++++.++++++.++..  +.+|+||+|
T Consensus       128 ~~~~~~~~g~iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~~--~~gIrvn~v  185 (257)
T 3imf_A          128 YWIEKGIKGNIINMVATYAW--------------------DAGPGVIHSAAAKAGVLAMTKTLAVEWGR--KYGIRVNAI  185 (257)
T ss_dssp             HHHHHTCCCEEEEECCGGGG--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHHH--HHCCEEEEE
T ss_pred             HHHhhCCCcEEEEECchhhc--------------------cCCCCcHHHHHHHHHHHHHHHHHHHHhcc--ccCeEEEEE
Confidence            99544337899999998873                    35667788999999999999999999841  359999999


Q ss_pred             cCCcccCCccCcchhH--HHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCcccc
Q 024553          168 DPGVVKTNIMREVPSF--LSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  232 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~--~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~~  232 (266)
                      +||+|+|++.......  ..........+++++.+|+|+|+.+++++... ...+|..+..++|..+.
T Consensus       186 ~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  253 (257)
T 3imf_A          186 APGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAAYINGTCMTMDGGQHLH  253 (257)
T ss_dssp             EECCBSSCCCC-------CCSHHHHTTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTSC
T ss_pred             EECCCcCCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCcccC
Confidence            9999999975432110  00111122235678889999999999654322 24589999888887654

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.96  E-value=1.7e-29  Score=211.03  Aligned_cols=194  Identities=18%  Similarity=0.149  Sum_probs=158.4

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+.  .+..+.+.++|++++++|+.|++++++.++|
T Consensus        76 ~~~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  149 (277)
T 4fc7_A           76 GRRCLPLSMDVRAPPAVMAAVDQALK------EFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYE  149 (277)
T ss_dssp             SSCEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCcEEEEEcCCCCHHHHHHHHHHHHH------HcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            45799999999999999999999998      568999999999976  3456788999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++++ .++||++||..+..                    +.+....|+++|++++.++++++.++.   +.+|+||+|
T Consensus       150 ~~~~~~-~g~iv~isS~~~~~--------------------~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gi~vn~v  205 (277)
T 4fc7_A          150 KFFRDH-GGVIVNITATLGNR--------------------GQALQVHAGSAKAAVDAMTRHLAVEWG---PQNIRVNSL  205 (277)
T ss_dssp             HTHHHH-CEEEEEECCSHHHH--------------------TCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             HHHHcC-CCEEEEECchhhCC--------------------CCCCcHHHHHHHHHHHHHHHHHHHHhh---hcCeEEEEE
Confidence            997766 78999999998743                    456678899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcc-h-hHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCccccC
Q 024553          168 DPGVVKTNIMREV-P-SFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVNS  233 (266)
Q Consensus       168 ~PG~v~T~~~~~~-~-~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~~~  233 (266)
                      +||+|.|++.... . ............+++++.+|+|+|+.+++++.. +...+|..+..++|..+..
T Consensus       206 ~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~~~~itG~~i~vdGG~~~~~  274 (277)
T 4fc7_A          206 APGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYLASPLASYVTGAVLVADGGAWLTF  274 (277)
T ss_dssp             EECCBSSSHHHHHHSCCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHC
T ss_pred             EECCEecchhhhhccCCHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCCccCCcCCCEEEECCCcccCC
Confidence            9999999853221 1 111122223344677889999999999955432 2356899999888876654

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.96  E-value=6.7e-29  Score=206.54  Aligned_cols=191  Identities=18%  Similarity=0.232  Sum_probs=156.8

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      .+.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++.+++.++|+|
T Consensus        54 ~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~  127 (269)
T 3vtz_A           54 VSDHFKIDVTNEEEVKEAVEKTTK------KYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVM  127 (269)
T ss_dssp             SSEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             ceeEEEecCCCHHHHHHHHHHHHH------HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            567899999999999999999998      5689999999999863  45677889999999999999999999999999


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      ++++ .|+||++||..+..                    +.+....|++||++++.++++++.+++   + +|+||+|+|
T Consensus       128 ~~~~-~g~iv~isS~~~~~--------------------~~~~~~~Y~asKaa~~~l~~~la~e~~---~-~i~vn~v~P  182 (269)
T 3vtz_A          128 LAIG-HGSIINIASVQSYA--------------------ATKNAAAYVTSKHALLGLTRSVAIDYA---P-KIRCNAVCP  182 (269)
T ss_dssp             HHHT-CEEEEEECCGGGTS--------------------BCTTCHHHHHHHHHHHHHHHHHHHHHT---T-TEEEEEEEE
T ss_pred             HHcC-CCEEEEECchhhcc--------------------CCCCChhHHHHHHHHHHHHHHHHHHhc---C-CCEEEEEEE
Confidence            8776 78999999998743                    556678899999999999999999996   5 899999999


Q ss_pred             CcccCCccCcchh----------HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCccccC
Q 024553          170 GVVKTNIMREVPS----------FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVNS  233 (266)
Q Consensus       170 G~v~T~~~~~~~~----------~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~~~  233 (266)
                      |+|+|++......          ...........+++++.+|+|+|+.+++++... ...+|..+..++|.....
T Consensus       183 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~~  257 (269)
T 3vtz_A          183 GTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDRSSFITGACLTVDGGLLSKL  257 (269)
T ss_dssp             CSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred             CCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCccCCCcCcEEEECCCccccC
Confidence            9999998644211          111222333446778889999999999655422 356899999888876543

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.96  E-value=1e-28  Score=205.14  Aligned_cols=200  Identities=13%  Similarity=0.102  Sum_probs=163.8

Q ss_pred             hcccCCCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC------CCCcCCCcccchhhhhhhhh
Q 024553            4 ITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIG   77 (266)
Q Consensus         4 i~~~~~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~------~~~~~~~~~~~~~~~~n~~~   77 (266)
                      +.+..++.++.++.||+++.++++++++++.+      .++++|+||||||+..      +..+.+.++|++++++|+.+
T Consensus        52 ~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~------~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~  125 (266)
T 3oig_A           52 LAGTLDRNDSIILPCDVTNDAEIETCFASIKE------QVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYS  125 (266)
T ss_dssp             HHHTSSSCCCEEEECCCSSSHHHHHHHHHHHH------HHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHH
T ss_pred             HHHhcCCCCceEEeCCCCCHHHHHHHHHHHHH------HhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHH
Confidence            33344444799999999999999999999998      5689999999999863      34567889999999999999


Q ss_pred             HHHHHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCC
Q 024553           78 AFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLD  157 (266)
Q Consensus        78 ~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~  157 (266)
                      ++.+++.++|+|++   .++||++||..+.                    .+.+....|+++|++++.++++++.++.  
T Consensus       126 ~~~l~~~~~~~~~~---~g~iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~--  180 (266)
T 3oig_A          126 LTAVVKAARPMMTE---GGSIVTLTYLGGE--------------------LVMPNYNVMGVAKASLDASVKYLAADLG--  180 (266)
T ss_dssp             HHHHHHHHGGGCTT---CEEEEEEECGGGT--------------------SCCTTTHHHHHHHHHHHHHHHHHHHHHG--
T ss_pred             HHHHHHHHHhhcCC---CceEEEEeccccc--------------------ccCCCcchhHHHHHHHHHHHHHHHHHHh--
Confidence            99999999999975   6899999998873                    3567778999999999999999999997  


Q ss_pred             CCCCeEEEEecCCcccCCccCcchhHHHH-HHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCccccCCc
Q 024553          158 KSRHVSVIAADPGVVKTNIMREVPSFLSL-MAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVNSSA  235 (266)
Q Consensus       158 ~~~~i~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~~~~~  235 (266)
                       +.+|+|++|+||+|+|++.......... .......+++++.+|+++|+.+++++.. +...+|..+..++|-......
T Consensus       181 -~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdGG~~~~~~~  259 (266)
T 3oig_A          181 -KENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPEEVGDTAAFLFSDMSRGITGENLHVDSGFHITARL  259 (266)
T ss_dssp             -GGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCCC
T ss_pred             -hcCcEEEEEecCcccccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCchhcCcCCEEEECCCeEEeeec
Confidence             7899999999999999998775443222 2223334567788999999999976543 245789999888887765433

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.96  E-value=8e-29  Score=207.90  Aligned_cols=192  Identities=20%  Similarity=0.220  Sum_probs=154.7

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC---CCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..   +..+.+.++|++++++|+.|++++++.++
T Consensus        75 ~~~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~  148 (286)
T 3uve_A           75 NRRIVTAEVDVRDYDALKAAVDSGVE------QLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGV  148 (286)
T ss_dssp             TCCEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CCceEEEEcCCCCHHHHHHHHHHHHH------HhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            45799999999999999999999998      5689999999999864   25567889999999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |+|++++..|+||++||..+.                    .+.+....|+++|+++..++++++.++.   +.+|+||+
T Consensus       149 ~~~~~~~~~g~iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gI~vn~  205 (286)
T 3uve_A          149 PHMIAGGRGGSIILTSSVGGL--------------------KAYPHTGHYVAAKHGVVGLMRAFGVELG---QHMIRVNS  205 (286)
T ss_dssp             HHHHHHTSCEEEEEECCGGGT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEE
T ss_pred             HHHHhCCCCcEEEEECchhhc--------------------cCCCCccHHHHHHHHHHHHHHHHHHHhc---ccCeEEEE
Confidence            999875436899999999873                    3567778999999999999999999998   78999999


Q ss_pred             ecCCcccCCccCcchhHHH------------HHH---HHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCcc
Q 024553          167 ADPGVVKTNIMREVPSFLS------------LMA---FTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  230 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~~~~------------~~~---~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~  230 (266)
                      |+||+|+|++.........            ...   .....+ +++.+|+|+|+.+++++.. +...+|..+..++|..
T Consensus       206 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~  284 (286)
T 3uve_A          206 VHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTLP-IPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSC  284 (286)
T ss_dssp             EEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHTTCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             EecCcccCCcccccchhhhccccccccchhhHHHHHHhhhccC-CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCccc
Confidence            9999999999764221100            000   000012 5678999999999954432 2356799998888864


Q ss_pred             c
Q 024553          231 V  231 (266)
Q Consensus       231 ~  231 (266)
                      +
T Consensus       285 l  285 (286)
T 3uve_A          285 L  285 (286)
T ss_dssp             G
T ss_pred             c
Confidence            3

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.96  E-value=6.2e-29  Score=205.42  Aligned_cols=190  Identities=15%  Similarity=0.193  Sum_probs=152.1

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCC------CCcCCCcccchhhhhhhhhHHHHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT------SSRLTPEGYDQMMSTNYIGAFFLTK   83 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~------~~~~~~~~~~~~~~~n~~~~~~l~~   83 (266)
                      +.++.++.||+++.++++++++.+.+       ++++|+||||||+...      ..+.+.++|++++++|+.|++.+++
T Consensus        51 ~~~~~~~~~D~~~~~~v~~~~~~~~~-------~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  123 (257)
T 3tl3_A           51 GDRARFAAADVTDEAAVASALDLAET-------MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLR  123 (257)
T ss_dssp             CTTEEEEECCTTCHHHHHHHHHHHHH-------HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCceEEEECCCCCHHHHHHHHHHHHH-------hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHH
Confidence            45789999999999999999998866       3789999999998632      2347889999999999999999999


Q ss_pred             hhHHHHhc--------CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhC
Q 024553           84 LLLPLLKN--------SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLG  155 (266)
Q Consensus        84 ~~~~~l~~--------~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~  155 (266)
                      .++|+|++        ++ .|+||++||..+.                    .+.++...|++||++++.++++++.++.
T Consensus       124 ~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~  182 (257)
T 3tl3_A          124 LAAERIAKTEPVGPNAEE-RGVIINTASVAAF--------------------DGQIGQAAYSASKGGVVGMTLPIARDLA  182 (257)
T ss_dssp             HHHHHHTTSCCC--CCCC-SEEEEEECCCC----------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             HHHHHHHHhcccccccCC-CcEEEEEcchhhc--------------------CCCCCCccHHHHHHHHHHHHHHHHHHhc
Confidence            99999987        33 7899999999873                    3556778999999999999999999997


Q ss_pred             CCCCCCeEEEEecCCcccCCccCcchhHHHHHHHHHHHHh-hcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          156 LDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL-GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       156 ~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                         +.+|+||+|+||+|+|++.....+.... ......+. +++.+|+|+|+.+++++.. +..+|..+..++|..+.
T Consensus       183 ---~~gI~vn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~r~~~p~dva~~v~~l~s~-~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          183 ---SHRIRVMTIAPGLFDTPLLASLPEEARA-SLGKQVPHPSRLGNPDEYGALAVHIIEN-PMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             ---GGTEEEEEEEECSBCCTTC---CHHHHH-HHHHTSSSSCSCBCHHHHHHHHHHHHHC-TTCCSCEEEESTTC---
T ss_pred             ---ccCcEEEEEEecCccChhhhhccHHHHH-HHHhcCCCCCCccCHHHHHHHHHHHhcC-CCCCCCEEEECCCccCC
Confidence               7899999999999999998775443221 11222234 6788999999999976644 67789999888886543

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.96  E-value=2.8e-29  Score=207.51  Aligned_cols=190  Identities=17%  Similarity=0.152  Sum_probs=149.4

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCC------CcCCCcccchhhhhhhhhHHHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS------SRLTPEGYDQMMSTNYIGAFFLTKL   84 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~------~~~~~~~~~~~~~~n~~~~~~l~~~   84 (266)
                      .++.++.||+++.++++++++++.+      .++++|+||||||+....      .+.+.++|++++++|+.|++.+++.
T Consensus        53 ~~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~  126 (257)
T 3tpc_A           53 AAVRFRNADVTNEADATAALAFAKQ------EFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRL  126 (257)
T ss_dssp             --CEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             CceEEEEccCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHH
Confidence            4688999999999999999999998      568999999999987432      2567789999999999999999999


Q ss_pred             hHHHHhcC-----CCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCC
Q 024553           85 LLPLLKNS-----PVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKS  159 (266)
Q Consensus        85 ~~~~l~~~-----~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~  159 (266)
                      ++|+|+++     +..++||++||..+..                    +.++...|+++|++++.++++++.++.   +
T Consensus       127 ~~~~m~~~~~~~~~~~g~iv~isS~~~~~--------------------~~~~~~~Y~asKaa~~~~~~~la~e~~---~  183 (257)
T 3tpc_A          127 AAEVMSQGEPDADGERGVIVNTASIAAFD--------------------GQIGQAAYAASKGGVAALTLPAARELA---R  183 (257)
T ss_dssp             HHHHHTTSCCCTTSCCEEEEEECCTHHHH--------------------CCTTCHHHHHHHHHHHHHHHHHHHHHG---G
T ss_pred             HHHHHHhccccCCCCCeEEEEEechhhcc--------------------CCCCCcchHHHHHHHHHHHHHHHHHHH---H
Confidence            99999875     2268999999998743                    456678899999999999999999997   7


Q ss_pred             CCeEEEEecCCcccCCccCcchhHHHHHHHHHHHHh-hcCCCHHHHHHHHHHHhcCCCCcccceeecCCCccc
Q 024553          160 RHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL-GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  231 (266)
Q Consensus       160 ~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~  231 (266)
                      .+|+||+|+||+|+|++....+.... .......++ +++.+|+|+|+.+++++. +...+|..+..++|..+
T Consensus       184 ~gi~vn~v~PG~v~t~~~~~~~~~~~-~~~~~~~p~~~r~~~~~dva~~v~~l~s-~~~itG~~i~vdGG~~~  254 (257)
T 3tpc_A          184 FGIRVVTIAPGIFDTPMMAGMPQDVQ-DALAASVPFPPRLGRAEEYAALVKHICE-NTMLNGEVIRLDGALRM  254 (257)
T ss_dssp             GTEEEEEEEECCBSCC---------------CCSSSSCSCBCHHHHHHHHHHHHH-CTTCCSCEEEESTTCCC
T ss_pred             cCeEEEEEEeCCCCChhhccCCHHHH-HHHHhcCCCCCCCCCHHHHHHHHHHHcc-cCCcCCcEEEECCCccC
Confidence            89999999999999999876543221 111112234 678899999999997664 35778999988888654

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.96  E-value=2.4e-28  Score=202.90  Aligned_cols=176  Identities=18%  Similarity=0.231  Sum_probs=149.3

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.||+++.++++++++++.+      .++++|+||||||+.  .+..+.+.++|++++++|+.|++.+++.++|.
T Consensus        59 ~~~~~~~~Dv~d~~~v~~~~~~~~~------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~  132 (266)
T 3p19_A           59 PNTLCAQVDVTDKYTFDTAITRAEK------IYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAP  132 (266)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHHHH------HHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCceEEEecCCCHHHHHHHHHHHHH------HCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            3688999999999999999999998      558999999999987  35567788999999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |++++ .|+||++||..+.                    .+.++...|+++|+++..++++++.++.   +.+|+||+|+
T Consensus       133 ~~~~~-~g~IV~isS~~~~--------------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~vn~v~  188 (266)
T 3p19_A          133 MKARN-CGTIINISSIAGK--------------------KTFPDHAAYCGTKFAVHAISENVREEVA---ASNVRVMTIA  188 (266)
T ss_dssp             HHHHT-CCEEEEECCGGGT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEE
T ss_pred             HHhcC-CcEEEEEcChhhC--------------------CCCCCCchHHHHHHHHHHHHHHHHHHhc---ccCcEEEEEe
Confidence            98876 7999999999873                    3566778999999999999999999997   7899999999


Q ss_pred             CCcccCCccCcchhHHHHHH-HHHHHHhhcCCCHHHHHHHHHHHhcCCC
Q 024553          169 PGVVKTNIMREVPSFLSLMA-FTVLKLLGLLQSPEKGINSVLDAALAPP  216 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~a~~~~~~~~~~~  216 (266)
                      ||+|+|++............ .....+++++.+|+|+|+++++++..+.
T Consensus       189 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~av~~l~~~~~  237 (266)
T 3p19_A          189 PSAVKTELLSHTTSQQIKDGYDAWRVDMGGVLAADDVARAVLFAYQQPQ  237 (266)
T ss_dssp             ECSBSSSGGGGCSCHHHHHHHHHHHHHTTCCBCHHHHHHHHHHHHHSCT
T ss_pred             eCccccchhhcccchhhhHHHHhhcccccCCCCHHHHHHHHHHHHcCCC
Confidence            99999999876543222111 1223477888999999999997665554

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.96  E-value=1.1e-28  Score=204.16  Aligned_cols=185  Identities=18%  Similarity=0.198  Sum_probs=149.6

Q ss_pred             EEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCC-CCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           13 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT-SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        13 ~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      +.++.||+++.++++++++++.+      .++++|+||||||+... ..+.+.++|++++++|+.|++++++.++|+|++
T Consensus        73 ~~~~~~Dv~~~~~v~~~~~~~~~------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~  146 (260)
T 3gem_A           73 AVALYGDFSCETGIMAFIDLLKT------QTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTA  146 (260)
T ss_dssp             CEEEECCTTSHHHHHHHHHHHHH------HCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred             CeEEECCCCCHHHHHHHHHHHHH------hcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            78899999999999999999998      67899999999998732 345677889999999999999999999999998


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCc
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV  171 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~  171 (266)
                      ++ .++||++||..+.                    .+.++...|+++|++++.++++++.++.   + +|+||+|+||+
T Consensus       147 ~~-~g~iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~-~Irvn~v~PG~  201 (260)
T 3gem_A          147 SE-VADIVHISDDVTR--------------------KGSSKHIAYCATKAGLESLTLSFAARFA---P-LVKVNGIAPAL  201 (260)
T ss_dssp             SS-SCEEEEECCGGGG--------------------TCCSSCHHHHHHHHHHHHHHHHHHHHHT---T-TCEEEEEEECT
T ss_pred             cC-CcEEEEECChhhc--------------------CCCCCcHhHHHHHHHHHHHHHHHHHHHC---C-CCEEEEEeecc
Confidence            76 7999999998873                    3566778999999999999999999996   5 79999999999


Q ss_pred             ccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          172 VKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       172 v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      |.|++......   ........+++++.+|+|+|+.+++++ .+...+|..+..++|..+.
T Consensus       202 v~t~~~~~~~~---~~~~~~~~p~~r~~~~edva~~v~~L~-~~~~itG~~i~vdGG~~~~  258 (260)
T 3gem_A          202 LMFQPKDDAAY---RANALAKSALGIEPGAEVIYQSLRYLL-DSTYVTGTTLTVNGGRHVK  258 (260)
T ss_dssp             TCC------------------CCSCCCCCTHHHHHHHHHHH-HCSSCCSCEEEESTTTTTC
T ss_pred             cccCCCCCHHH---HHHHHhcCCCCCCCCHHHHHHHHHHHh-hCCCCCCCEEEECCCcccC
Confidence            99987542111   111222335667889999999999876 5567889999888887654

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.96  E-value=1.2e-28  Score=206.15  Aligned_cols=191  Identities=18%  Similarity=0.170  Sum_probs=153.1

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++++++.++|
T Consensus        76 ~~~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  149 (280)
T 3pgx_A           76 GRKALTRVLDVRDDAALRELVADGME------QFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVP  149 (280)
T ss_dssp             TCCEEEEECCTTCHHHHHHHHHHHHH------HHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCeEEEEEcCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            45789999999999999999999998      5689999999999874  456778999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++++..++||++||..+.                    .+.++...|+++|++++.++++++.++.   +.+|+||+|
T Consensus       150 ~~~~~~~~g~iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~vn~v  206 (280)
T 3pgx_A          150 AMIEAGNGGSIVVVSSSAGL--------------------KATPGNGHYSASKHGLTALTNTLAIELG---EYGIRVNSI  206 (280)
T ss_dssp             HHHHHCSCEEEEEECCGGGT--------------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             HHHhcCCCCEEEEEcchhhc--------------------cCCCCchhHHHHHHHHHHHHHHHHHHhh---hcCeEEEEE
Confidence            99876436899999998873                    3567778999999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHH---------HHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCcc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAF---------TVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  230 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~---------~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~  230 (266)
                      +||+|+|++.............         ....+. ++.+|+|+|+.+++++.. +...+|..+..++|..
T Consensus       207 ~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  278 (280)
T 3pgx_A          207 HPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPN-GFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGAL  278 (280)
T ss_dssp             EECSBCSTTCCHHHHHHHHHHCGGGGGGSCCBTTBCS-SCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTGG
T ss_pred             eeCcccCcccchhhhhhhhhcCchhhhhhhhcccCCC-CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            9999999987642111000000         000112 466999999999955432 2345799988887754

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.96  E-value=1.2e-28  Score=205.67  Aligned_cols=188  Identities=18%  Similarity=0.176  Sum_probs=154.1

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      . +++|+||||||+..  +..+.+.++|++++++|+.|++.+++.++|
T Consensus        81 ~~~~~~~~~Dv~~~~~~~~~~~~~~~------~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  153 (275)
T 4imr_A           81 GGTAQELAGDLSEAGAGTDLIERAEA------I-APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALP  153 (275)
T ss_dssp             TCCEEEEECCTTSTTHHHHHHHHHHH------H-SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCeEEEEEecCCCHHHHHHHHHHHHH------h-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            45789999999999999999999987      4 78999999999863  456788999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++++ .|+||++||..+.                    .+.+....|++||+++..++++++.++.   +.+|+||+|
T Consensus       154 ~m~~~~-~g~Iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v  209 (275)
T 4imr_A          154 KMVARK-WGRVVSIGSINQL--------------------RPKSVVTAYAATKAAQHNLIQSQARDFA---GDNVLLNTL  209 (275)
T ss_dssp             HHHHHT-CEEEEEECCGGGT--------------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             HHHhcC-CcEEEEECCHHhC--------------------CCCCCchhhHHHHHHHHHHHHHHHHHhc---ccCcEEEEE
Confidence            998776 7899999998873                    2455567799999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchh--HHHHHHHHHHH-HhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCC
Q 024553          168 DPGVVKTNIMREVPS--FLSLMAFTVLK-LLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKG  228 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~--~~~~~~~~~~~-~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g  228 (266)
                      +||+|+|++......  ........... +++++.+|+|+|+.+++++.. +...+|..+..++|
T Consensus       210 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG  274 (275)
T 4imr_A          210 APGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVGAALFLASEACSFMTGETIFLTGG  274 (275)
T ss_dssp             EESSBCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESSC
T ss_pred             EeccccCcccccccccChHHHHHHHhhcCccCCCcCHHHHHHHHHHHcCcccCCCCCCEEEeCCC
Confidence            999999998655322  11112222223 678889999999999954432 13457998887766

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.96  E-value=1.7e-28  Score=205.02  Aligned_cols=192  Identities=20%  Similarity=0.207  Sum_probs=153.7

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++++++.++|
T Consensus        72 ~~~~~~~~~D~~~~~~v~~~~~~~~~------~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  145 (277)
T 3tsc_A           72 NRRIVAAVVDTRDFDRLRKVVDDGVA------ALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAP  145 (277)
T ss_dssp             TCCEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCeEEEEECCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            45799999999999999999999998      5689999999999874  445788999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++++..|+||++||..+.                    .+.+....|++||++++.++++++.++.   +.+|+||+|
T Consensus       146 ~~~~~~~~g~iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~vn~v  202 (277)
T 3tsc_A          146 RIIEGGRGGSIILISSAAGM--------------------KMQPFMIHYTASKHAVTGLARAFAAELG---KHSIRVNSV  202 (277)
T ss_dssp             HHHHHTSCEEEEEECCGGGT--------------------SCCSSCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             HHHhcCCCCEEEEEccHhhC--------------------CCCCCchhhHHHHHHHHHHHHHHHHHhC---ccCeEEEEE
Confidence            99876436899999999873                    3566778899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHH----------HHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCccc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFT----------VLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  231 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~----------~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~  231 (266)
                      +||+|+|++..............          ...+ .++.+|+|+|+.+++++... ...+|..+..++|...
T Consensus       203 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  276 (277)
T 3tsc_A          203 HPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLP-DWVAEPEDIADTVCWLASDESRKVTAAQIPVDQGSTQ  276 (277)
T ss_dssp             EESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             EeCCCcCCcccchhhhhhhhcccccHHHHHHhhhccC-CCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCccc
Confidence            99999999876421110000000          0001 14679999999999654322 3567999888887643

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.96  E-value=2.9e-29  Score=208.78  Aligned_cols=192  Identities=21%  Similarity=0.248  Sum_probs=155.9

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.+++.+++.++|
T Consensus        74 ~~~~~~~~~Dl~~~~~v~~~~~~~~~------~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  147 (269)
T 3gk3_A           74 GRDFKAYAVDVADFESCERCAEKVLA------DFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIA  147 (269)
T ss_dssp             TCCCEEEECCTTCHHHHHHHHHHHHH------HHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCceEEEEecCCCHHHHHHHHHHHHH------HcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            45799999999999999999999998      5589999999999873  456778899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++++ .++||++||..+..                    +.++...|+++|+++..++++++.++.   +.+|+|++|
T Consensus       148 ~~~~~~-~g~iv~isS~~~~~--------------------~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~v~~v  203 (269)
T 3gk3_A          148 GMVERR-FGRIVNIGSVNGSR--------------------GAFGQANYASAKAGIHGFTKTLALETA---KRGITVNTV  203 (269)
T ss_dssp             HHHHHT-CEEEEEECCHHHHH--------------------CCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             HHHhcC-CCEEEEeCChhhcc--------------------CCCCcchHHHHHHHHHHHHHHHHHHhh---hcCCEEEEE
Confidence            998766 78999999988743                    556678999999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCccc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  231 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~  231 (266)
                      +||+|+|++.................+++++.+|+++|+.+++++... ...+|..+..++|..+
T Consensus       204 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~  268 (269)
T 3gk3_A          204 SPGYLATAMVEAVPQDVLEAKILPQIPVGRLGRPDEVAALIAFLCSDDAGFVTGADLAINGGMHM  268 (269)
T ss_dssp             EECSBCCTTTTC-------CCSGGGCTTSSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTSCC
T ss_pred             ecCcccchhhhhhchhHHHHHhhhcCCcCCccCHHHHHHHHHHHhCCCcCCeeCcEEEECCCEeC
Confidence            999999999876543221111122335567789999999999544322 2468999988887643

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.96  E-value=1.5e-28  Score=202.85  Aligned_cols=190  Identities=21%  Similarity=0.238  Sum_probs=159.1

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.+|+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++.+++.++|
T Consensus        62 ~~~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  135 (256)
T 3ezl_A           62 GFDFYASEGNVGDWDSTKQAFDKVKA------EVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVID  135 (256)
T ss_dssp             TCCCEEEECCTTCHHHHHHHHHHHHH------HTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCeeEEEecCCCCHHHHHHHHHHHHH------hcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            35789999999999999999999998      6689999999999874  456778899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++++ .++||++||..+..                    +.++...|+++|++++.++++++.++.   ..+|+|++|
T Consensus       136 ~~~~~~-~g~iv~isS~~~~~--------------------~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v  191 (256)
T 3ezl_A          136 GMVERG-WGRIINISSVNGQK--------------------GQFGQTNYSTAKAGIHGFTMSLAQEVA---TKGVTVNTV  191 (256)
T ss_dssp             HHHHHT-CEEEEEECCCCGGG--------------------SCSCCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             HHHhcC-CCEEEEEcchhhcc--------------------CCCCCcccHHHHHHHHHHHHHHHHHHH---HhCCEEEEE
Confidence            998876 78999999988743                    556778899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCcc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  230 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~  230 (266)
                      +||+|+|++.....+.. ........+++++.+|+++|+.+++++.. +...+|..+..++|..
T Consensus       192 ~PG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~~  254 (256)
T 3ezl_A          192 SPGYIGTDMVKAIRPDV-LEKIVATIPVRRLGSPDEIGSIVAWLASEESGFSTGADFSLNGGLH  254 (256)
T ss_dssp             EECSBCCHHHHTSCHHH-HHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred             EECcccCccccccCHHH-HHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCEe
Confidence            99999999987654432 12223334667788999999999965532 2356899988887764

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.96  E-value=1.5e-28  Score=204.59  Aligned_cols=187  Identities=21%  Similarity=0.222  Sum_probs=154.6

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+.  .+..+.+.++|++++++|+.|++++++.++|
T Consensus        80 ~~~~~~~~~Dv~d~~~v~~~~~~~~~------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~  153 (271)
T 3v2g_A           80 GGRAVAIRADNRDAEAIEQAIRETVE------ALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASR  153 (271)
T ss_dssp             TCCEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCCCHHHHHHHHHHHHH------HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            45789999999999999999999998      558999999999987  3556788999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++   .++||++||..+..                   .+.++...|+++|++++.++++++.++.   +.+|+||+|
T Consensus       154 ~m~~---~g~iv~isS~~~~~-------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gIrvn~v  208 (271)
T 3v2g_A          154 HLGD---GGRIITIGSNLAEL-------------------VPWPGISLYSASKAALAGLTKGLARDLG---PRGITVNIV  208 (271)
T ss_dssp             HCCT---TCEEEEECCGGGTC-------------------CCSTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEE
T ss_pred             HHhc---CCEEEEEeChhhcc-------------------CCCCCchHHHHHHHHHHHHHHHHHHHhh---hhCeEEEEE
Confidence            9975   68999999977532                   2356778999999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  229 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~  229 (266)
                      +||+|+|++.........  ......+++++.+|+|+|+.+++++.. +...+|..+..++|.
T Consensus       209 ~PG~v~T~~~~~~~~~~~--~~~~~~~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~  269 (271)
T 3v2g_A          209 HPGSTDTDMNPADGDHAE--AQRERIATGSYGEPQDIAGLVAWLAGPQGKFVTGASLTIDGGA  269 (271)
T ss_dssp             EECSBCSSSSCSSCSSHH--HHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             ecCCCcCCcccccchhHH--HHHhcCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEeCcCc
Confidence            999999999765432221  122334567888999999999965432 235679988887774

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.96  E-value=2.2e-28  Score=200.89  Aligned_cols=190  Identities=19%  Similarity=0.250  Sum_probs=158.8

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.+++.+++.++|
T Consensus        53 ~~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  126 (247)
T 3lyl_A           53 GFKARGLVLNISDIESIQNFFAEIKA------ENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVR  126 (247)
T ss_dssp             TCCEEEEECCTTCHHHHHHHHHHHHH------TTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCceEEEEecCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            45789999999999999999999998      7789999999999874  445778899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++++ .++||++||..+..                    +.++...|+++|++++.++++++.++.   +.+|++++|
T Consensus       127 ~~~~~~-~g~iv~isS~~~~~--------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v  182 (247)
T 3lyl_A          127 GMMKKR-WGRIISIGSVVGSA--------------------GNPGQTNYCAAKAGVIGFSKSLAYEVA---SRNITVNVV  182 (247)
T ss_dssp             HHHHHT-CEEEEEECCTHHHH--------------------CCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             HHHHcC-CeEEEEEcchhhcc--------------------CCCCcHHHHHHHHHHHHHHHHHHHHHH---HcCeEEEEE
Confidence            998776 78999999988743                    456678899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCcc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  230 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~  230 (266)
                      +||+|+|++.....+.... ......+.+++.+|+|+|+.+++++.. ....+|..+..++|..
T Consensus       183 ~PG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~~  245 (247)
T 3lyl_A          183 APGFIATDMTDKLTDEQKS-FIATKIPSGQIGEPKDIAAAVAFLASEEAKYITGQTLHVNGGMY  245 (247)
T ss_dssp             EECSBCCTTTTTSCHHHHH-HHHTTSTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             eeCcEecccchhccHHHHH-HHhhcCCCCCCcCHHHHHHHHHHHhCCCcCCccCCEEEECCCEe
Confidence            9999999998876443221 122233556788999999999965532 2355799988877754

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.96  E-value=6e-28  Score=201.26  Aligned_cols=192  Identities=21%  Similarity=0.323  Sum_probs=151.0

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCC-CCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMH-SSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~-~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      +.++.++.||+++.++++++++++.+      .+ +++|+||||||+.  .+..+.+.++|++++++|+.|++.+++.++
T Consensus        69 ~~~~~~~~~D~~~~~~~~~~~~~~~~------~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~  142 (273)
T 1ae1_A           69 GLNVEGSVCDLLSRTERDKLMQTVAH------VFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAY  142 (273)
T ss_dssp             TCCEEEEECCTTCHHHHHHHHHHHHH------HTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CCceEEEECCCCCHHHHHHHHHHHHH------HcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            34689999999999999999999988      56 7999999999986  345677889999999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |.|++++ .++||++||..+.                    .+.++...|+++|++++.++++++.++.   +.+|+||+
T Consensus       143 ~~m~~~~-~g~iv~isS~~~~--------------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~  198 (273)
T 1ae1_A          143 PLLKASQ-NGNVIFLSSIAGF--------------------SALPSVSLYSASKGAINQMTKSLACEWA---KDNIRVNS  198 (273)
T ss_dssp             HHHHHHT-SEEEEEECCGGGT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEE
T ss_pred             HHHHhcC-CcEEEEEcCHhhc--------------------CCCCCcchhHHHHHHHHHHHHHHHHHHh---hcCcEEEE
Confidence            9998765 6899999998873                    2456678899999999999999999997   78999999


Q ss_pred             ecCCcccCCccCcchh-----HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCccc
Q 024553          167 ADPGVVKTNIMREVPS-----FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  231 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~-----~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~  231 (266)
                      |+||+++|++......     ...........+++++.+|+|+|+.+++++... ...+|..+..++|...
T Consensus       199 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~  269 (273)
T 1ae1_A          199 VAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASYITGQIIWADGGFTA  269 (273)
T ss_dssp             EEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             EEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEECCCccc
Confidence            9999999998754321     111111222345677889999999999655322 2457999988888654

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.96  E-value=2.7e-28  Score=201.94  Aligned_cols=190  Identities=21%  Similarity=0.184  Sum_probs=148.9

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++.+++.++|+
T Consensus        55 ~~~~~~~~D~~~~~~v~~~~~~~~~------~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~  128 (260)
T 1x1t_A           55 VKVLYDGADLSKGEAVRGLVDNAVR------QMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPH  128 (260)
T ss_dssp             SCEEEECCCTTSHHHHHHHHHHHHH------HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CcEEEEECCCCCHHHHHHHHHHHHH------hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4688999999999999999999988      5589999999999863  4456788999999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |++++ .++||++||..+.                    .+.++...|+++|++++.++++++.++.   +.+|+||+|+
T Consensus       129 ~~~~~-~g~iv~isS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~  184 (260)
T 1x1t_A          129 MKKQG-FGRIINIASAHGL--------------------VASANKSAYVAAKHGVVGFTKVTALETA---GQGITANAIC  184 (260)
T ss_dssp             HHHHT-CEEEEEECCGGGT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHT---TTTEEEEEEE
T ss_pred             HHhcC-CCEEEEECcHHhC--------------------cCCCCCchHHHHHHHHHHHHHHHHHHhc---cCCEEEEEEe
Confidence            98765 7899999998873                    2456678899999999999999999997   7899999999


Q ss_pred             CCcccCCccCcchhH---------HHH-HHH-HHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCcc
Q 024553          169 PGVVKTNIMREVPSF---------LSL-MAF-TVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  230 (266)
Q Consensus       169 PG~v~T~~~~~~~~~---------~~~-~~~-~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~  230 (266)
                      ||+|+|++.......         ... ... ....+++++.+|+++|+.+++++... ...+|..+..++|..
T Consensus       185 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG~~  258 (260)
T 1x1t_A          185 PGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGWT  258 (260)
T ss_dssp             ECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             ecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHHHHHHHHhChhhcCCCCCEEEECCCcc
Confidence            999999987543210         000 001 12235567889999999999655322 346798888777743

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.96  E-value=6.6e-29  Score=206.39  Aligned_cols=192  Identities=16%  Similarity=0.146  Sum_probs=154.0

Q ss_pred             CCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC---CCCcCCCcccchhhhhhhhhHHHHHHhh
Q 024553            9 KDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLL   85 (266)
Q Consensus         9 ~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~   85 (266)
                      ++.++.++.||+++.++++++++++.+      .++++|+||||||+..   +..+.+.++|++++++|+.|++.+++.+
T Consensus        62 ~~~~~~~~~~D~~~~~~v~~~~~~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~  135 (267)
T 1iy8_A           62 PDAEVLTTVADVSDEAQVEAYVTATTE------RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKV  135 (267)
T ss_dssp             TTCCEEEEECCTTSHHHHHHHHHHHHH------HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             CCceEEEEEccCCCHHHHHHHHHHHHH------HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence            356789999999999999999999988      5589999999999863   3456788999999999999999999999


Q ss_pred             HHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEE
Q 024553           86 LPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVI  165 (266)
Q Consensus        86 ~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~  165 (266)
                      +|.|++++ .++||++||..+.                    .+.++...|+++|++++.++++++.++.   +.+|+||
T Consensus       136 ~~~~~~~~-~g~iv~isS~~~~--------------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~  191 (267)
T 1iy8_A          136 LKIMREQG-SGMVVNTASVGGI--------------------RGIGNQSGYAAAKHGVVGLTRNSAVEYG---RYGIRIN  191 (267)
T ss_dssp             HHHHHHHT-CCEEEEECCGGGT--------------------SBCSSBHHHHHHHHHHHHHHHHHHHHHG---GGTCEEE
T ss_pred             HHHHHHcC-CCEEEEEcchhhc--------------------cCCCCCccHHHHHHHHHHHHHHHHHHHH---hcCeEEE
Confidence            99998766 7899999998873                    2456678899999999999999999997   7899999


Q ss_pred             EecCCcccCCccCcc----hhH-HH-H-HHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCcc
Q 024553          166 AADPGVVKTNIMREV----PSF-LS-L-MAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  230 (266)
Q Consensus       166 ~v~PG~v~T~~~~~~----~~~-~~-~-~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~  230 (266)
                      +|+||+++|++....    .+. .. . .......+++++.+|+|+|+.+++++... ...+|..+..++|..
T Consensus       192 ~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  264 (267)
T 1iy8_A          192 AIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQS  264 (267)
T ss_dssp             EEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred             EEEeCCCcCcchhccccccChhhhhhHHHHHhccCCCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence            999999999986432    011 00 0 01111225567889999999999654322 246899988777754

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.96  E-value=2.3e-28  Score=203.08  Aligned_cols=192  Identities=17%  Similarity=0.175  Sum_probs=156.8

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++.+++.++|
T Consensus        72 ~~~~~~~~~Dl~~~~~v~~~~~~~~~------~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  145 (267)
T 3gdg_A           72 GIKAKAYKCQVDSYESCEKLVKDVVA------DFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGH  145 (267)
T ss_dssp             CCCEECCBCCTTCHHHHHHHHHHHHH------HTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCceeEEecCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHH
Confidence            45799999999999999999999998      6689999999999874  456778899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++++ .++||++||..+...                  ...++...|+++|++++.++++++.++.   +. |+||+|
T Consensus       146 ~~~~~~-~g~iv~isS~~~~~~------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~-i~v~~v  202 (267)
T 3gdg_A          146 HFKERG-TGSLVITASMSGHIA------------------NFPQEQTSYNVAKAGCIHMARSLANEWR---DF-ARVNSI  202 (267)
T ss_dssp             HHHHHT-CCEEEEECCGGGTSC------------------CSSSCCHHHHHHHHHHHHHHHHHHHHTT---TT-CEEEEE
T ss_pred             HHHHcC-CceEEEEcccccccc------------------CCCCCCCcchHHHHHHHHHHHHHHHHhc---cC-cEEEEE
Confidence            998876 789999999886431                  1123567899999999999999999996   45 999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCccc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  231 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~  231 (266)
                      +||+|+|++.....+... .......+++++.+|+|+|+.+++++.. +...+|..+..++|..+
T Consensus       203 ~PG~v~t~~~~~~~~~~~-~~~~~~~~~~r~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~~  266 (267)
T 3gdg_A          203 SPGYIDTGLSDFVPKETQ-QLWHSMIPMGRDGLAKELKGAYVYFASDASTYTTGADLLIDGGYTT  266 (267)
T ss_dssp             EECCEECSCGGGSCHHHH-HHHHTTSTTSSCEETHHHHHHHHHHHSTTCTTCCSCEEEESTTGGG
T ss_pred             ECCccccchhhhCCHHHH-HHHHhcCCCCCCcCHHHHHhHhheeecCccccccCCEEEECCceec
Confidence            999999999876544322 2222334567788999999999965532 23568999888887643

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.96  E-value=3.9e-28  Score=201.76  Aligned_cols=190  Identities=22%  Similarity=0.300  Sum_probs=153.8

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++.+++.++|
T Consensus        70 ~~~~~~~~~Dl~~~~~v~~~~~~~~~------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  143 (267)
T 1vl8_A           70 GVETMAFRCDVSNYEEVKKLLEAVKE------KFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFS  143 (267)
T ss_dssp             CCCEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCeEEEEEcCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            34688999999999999999999988      5589999999999863  455678899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCc-ccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           88 LLKNSPVPSRIVNVTSFT-HRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      .|++++ .++||++||.. +.                    .+.++...|+++|++++.++++++.++.   +.+|+||+
T Consensus       144 ~m~~~~-~g~iv~isS~~~~~--------------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~  199 (267)
T 1vl8_A          144 LLRESD-NPSIINIGSLTVEE--------------------VTMPNISAYAASKGGVASLTKALAKEWG---RYGIRVNV  199 (267)
T ss_dssp             HHTTCS-SCEEEEECCGGGTC--------------------CCSSSCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEE
T ss_pred             HHHHcC-CcEEEEECCcchhc--------------------cCCCCChhHHHHHHHHHHHHHHHHHHhc---ccCeEEEE
Confidence            998876 78999999987 52                    3456678899999999999999999997   78999999


Q ss_pred             ecCCcccCCccCcchh-HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          167 ADPGVVKTNIMREVPS-FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      |+||+++|++...... ...........+++++.+|+++|+.+++++... ...+|..+..++|.
T Consensus       200 v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~  264 (267)
T 1vl8_A          200 IAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGW  264 (267)
T ss_dssp             EEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             EEeccCccccccccccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCccccCCcCCeEEECCCC
Confidence            9999999998654321 111111112235567889999999999665432 35679988877774

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.96  E-value=4.3e-28  Score=202.84  Aligned_cols=197  Identities=16%  Similarity=0.102  Sum_probs=160.4

Q ss_pred             hhcccCCCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCC------CCc-CCCcccchhhhhhh
Q 024553            3 DITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT------SSR-LTPEGYDQMMSTNY   75 (266)
Q Consensus         3 ~i~~~~~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~------~~~-~~~~~~~~~~~~n~   75 (266)
                      ++.+.++  ++.++.||+++.++++++++++.+      .++++|+||||||+...      ..+ .+.++|++++++|+
T Consensus        69 ~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~------~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~  140 (280)
T 3nrc_A           69 KLCAEFN--PAAVLPCDVISDQEIKDLFVELGK------VWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISA  140 (280)
T ss_dssp             HHHGGGC--CSEEEECCTTCHHHHHHHHHHHHH------HCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHT
T ss_pred             HHHHhcC--CceEEEeecCCHHHHHHHHHHHHH------HcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHH
Confidence            3444433  478999999999999999999998      67899999999998642      223 78899999999999


Q ss_pred             hhHHHHHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhC
Q 024553           76 IGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLG  155 (266)
Q Consensus        76 ~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~  155 (266)
                      .+++.+++.++|.|+++  .++||++||..+.                    .+.+....|+++|++++.++++++.++.
T Consensus       141 ~~~~~l~~~~~~~~~~~--~g~iv~isS~~~~--------------------~~~~~~~~Y~asKaal~~~~~~la~e~~  198 (280)
T 3nrc_A          141 YSFAALAKEGRSMMKNR--NASMVALTYIGAE--------------------KAMPSYNTMGVAKASLEATVRYTALALG  198 (280)
T ss_dssp             HHHHHHHHHHHHHHTTT--TCEEEEEECGGGT--------------------SCCTTTHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             HHHHHHHHHHHHHhhcC--CCeEEEEeccccc--------------------cCCCCchhhHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999865  5899999998873                    3567778999999999999999999997


Q ss_pred             CCCCCCeEEEEecCCcccCCccCcchhHHH-HHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCcccc
Q 024553          156 LDKSRHVSVIAADPGVVKTNIMREVPSFLS-LMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       156 ~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~~  232 (266)
                         +.+|+|++|+||+|+|++......... ........+.+++.+|+++|+.+++++.. ....+|..+..++|..+.
T Consensus       199 ---~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG~~~~  274 (280)
T 3nrc_A          199 ---EDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFLCSDMATGITGEVVHVDAGYHCV  274 (280)
T ss_dssp             ---GGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTTCSCCCHHHHHHHHHHTTSGGGTTCCSCEEEESTTGGGC
T ss_pred             ---HcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccCCcCCcEEEECCCcccc
Confidence               789999999999999999876543222 22233344567888999999999954332 134689999988887664

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.95  E-value=5.7e-28  Score=200.76  Aligned_cols=195  Identities=19%  Similarity=0.164  Sum_probs=154.5

Q ss_pred             hhcccCCCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHH
Q 024553            3 DITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFF   80 (266)
Q Consensus         3 ~i~~~~~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~   80 (266)
                      ++.+.+++..+.++.+|+++.++++++++          +++++|+||||||+..  +..+.+.++|++++++|+.|++.
T Consensus        53 ~l~~~~~~~~~~~~~~D~~~~~~~~~~~~----------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~  122 (267)
T 3t4x_A           53 EIRAQYPDAILQPVVADLGTEQGCQDVIE----------KYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVR  122 (267)
T ss_dssp             HHHHHCTTCEEEEEECCTTSHHHHHHHHH----------HCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHH
T ss_pred             HHHhhCCCceEEEEecCCCCHHHHHHHHH----------hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHH
Confidence            44555566788999999999999887764          3478999999999874  45677889999999999999999


Q ss_pred             HHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCC
Q 024553           81 LTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSR  160 (266)
Q Consensus        81 l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~  160 (266)
                      +++.++|+|++++ .++||++||..+.                    .+.+....|+++|++++.++++++.++.   +.
T Consensus       123 ~~~~~~~~~~~~~-~g~iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~  178 (267)
T 3t4x_A          123 LTRSYLKKMIERK-EGRVIFIASEAAI--------------------MPSQEMAHYSATKTMQLSLSRSLAELTT---GT  178 (267)
T ss_dssp             HHHHHHHHHHHTT-EEEEEEECCGGGT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHTT---TS
T ss_pred             HHHHHHHHHHhCC-CCEEEEEcchhhc--------------------cCCCcchHHHHHHHHHHHHHHHHHHHhC---CC
Confidence            9999999998876 7899999999873                    3566778999999999999999999998   78


Q ss_pred             CeEEEEecCCcccCCccCcchh----------HHHHHHHHH----HHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeec
Q 024553          161 HVSVIAADPGVVKTNIMREVPS----------FLSLMAFTV----LKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFG  225 (266)
Q Consensus       161 ~i~v~~v~PG~v~T~~~~~~~~----------~~~~~~~~~----~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~  225 (266)
                      +|+||+|+||+++|++......          .........    ..+++++.+|+|+|+.+++++.. +...+|..+..
T Consensus       179 gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~v  258 (267)
T 3t4x_A          179 NVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHLVTFLSSPLSSAINGSALRI  258 (267)
T ss_dssp             EEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             CeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHHHHHHHHHHcCccccCccCCeEEE
Confidence            9999999999999987543211          111111111    12357888999999999954432 23568999988


Q ss_pred             CCCccc
Q 024553          226 GKGRTV  231 (266)
Q Consensus       226 ~~g~~~  231 (266)
                      ++|...
T Consensus       259 dGG~~~  264 (267)
T 3t4x_A          259 DGGLVR  264 (267)
T ss_dssp             STTCSC
T ss_pred             CCCccc
Confidence            888654

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.95  E-value=6e-28  Score=201.71  Aligned_cols=193  Identities=18%  Similarity=0.160  Sum_probs=150.8

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+.....  +.++|++++++|+.|++++++.++|+|
T Consensus        73 ~~~~~~~~~D~~~~~~v~~~~~~~~~------~~g~id~lv~nAg~~~~~~--~~~~~~~~~~~N~~g~~~l~~~~~~~~  144 (278)
T 3sx2_A           73 GSRIVARQADVRDRESLSAALQAGLD------ELGRLDIVVANAGIAPMSA--GDDGWHDVIDVNLTGVYHTIKVAIPTL  144 (278)
T ss_dssp             TCCEEEEECCTTCHHHHHHHHHHHHH------HHCCCCEEEECCCCCCCSS--THHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             CCeEEEEeCCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCC--CHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            35799999999999999999999998      5689999999999864322  578899999999999999999999999


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      ++++..++||++||..+....                ....++...|+++|++++.++++++.++.   +.+|+||+|+|
T Consensus       145 ~~~~~~g~iv~isS~~~~~~~----------------~~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~vn~v~P  205 (278)
T 3sx2_A          145 VKQGTGGSIVLISSSAGLAGV----------------GSADPGSVGYVAAKHGVVGLMRVYANLLA---GQMIRVNSIHP  205 (278)
T ss_dssp             HHHCSCEEEEEECCGGGTSCC----------------CCSSHHHHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEE
T ss_pred             HhCCCCcEEEEEccHHhcCCC----------------ccCCCCchHhHHHHHHHHHHHHHHHHHHh---ccCcEEEEEec
Confidence            876436899999998874310                11236678899999999999999999997   78999999999


Q ss_pred             CcccCCccCcchhHHHHHHHHHH----------HHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCcc
Q 024553          170 GVVKTNIMREVPSFLSLMAFTVL----------KLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  230 (266)
Q Consensus       170 G~v~T~~~~~~~~~~~~~~~~~~----------~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~  230 (266)
                      |+|+|++................          .+ +++.+|+|+|+.+++++.. ....+|..+..++|..
T Consensus       206 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~  276 (278)
T 3sx2_A          206 SGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP-VEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFL  276 (278)
T ss_dssp             SCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS-CSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred             CCccCccchhhhHHHHHhhccchhhhhhhhhhhcC-cCcCCHHHHHHHHHHHhCcccccccCCEEeECCCcc
Confidence            99999998753221111110000          01 3567999999999954432 2356799888887754

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.95  E-value=2e-28  Score=202.48  Aligned_cols=190  Identities=19%  Similarity=0.223  Sum_probs=153.3

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++.+++.++|
T Consensus        52 ~~~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  125 (258)
T 3a28_C           52 DQKAVFVGLDVTDKANFDSAIDEAAE------KLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASR  125 (258)
T ss_dssp             TCCEEEEECCTTCHHHHHHHHHHHHH------HHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCcEEEEEccCCCHHHHHHHHHHHHH------HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHH
Confidence            45789999999999999999999988      5589999999999863  455778899999999999999999999999


Q ss_pred             HHhcCCCC-CeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           88 LLKNSPVP-SRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        88 ~l~~~~~~-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      .|++++ . ++||++||..+.                    .+.+....|+++|++++.++++++.++.   +.+|+||+
T Consensus       126 ~~~~~~-~~g~iv~isS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~vn~  181 (258)
T 3a28_C          126 KFDELG-VKGKIINAASIAAI--------------------QGFPILSAYSTTKFAVRGLTQAAAQELA---PKGHTVNA  181 (258)
T ss_dssp             HHHHHT-CCCEEEEECCGGGT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEE
T ss_pred             HHHhcC-CCcEEEEECcchhc--------------------cCCCCchhHHHHHHHHHHHHHHHHHHHH---hhCeEEEE
Confidence            998765 4 899999998863                    3456678899999999999999999997   78999999


Q ss_pred             ecCCcccCCccCcchh----------HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          167 ADPGVVKTNIMREVPS----------FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~----------~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      |+||+++|++......          ...........+++++.+|+|+|+.+++++... ...+|..+..++|.
T Consensus       182 v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  255 (258)
T 3a28_C          182 YAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLASENSNYVTGQVMLVDGGM  255 (258)
T ss_dssp             EEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred             EECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCcccCCCCCCEEEECCCE
Confidence            9999999998653210          000111111125567889999999999655322 24689988877774

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.95  E-value=1.8e-28  Score=202.06  Aligned_cols=190  Identities=22%  Similarity=0.259  Sum_probs=125.8

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC-----CCCcCCCcccchhhhhhhhhHHHHHHh
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA-----TSSRLTPEGYDQMMSTNYIGAFFLTKL   84 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~-----~~~~~~~~~~~~~~~~n~~~~~~l~~~   84 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..     +..+.+.++|++++++|+.+++.+++.
T Consensus        57 ~~~~~~~~~D~~~~~~~~~~~~~~~~------~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~  130 (253)
T 3qiv_A           57 GGTAISVAVDVSDPESAKAMADRTLA------EFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRA  130 (253)
T ss_dssp             TCEEEEEECCTTSHHHHHHHHHHHHH------HHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEEccCCCHHHHHHHHHHHHH------HcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHH
Confidence            45789999999999999999999998      5589999999999852     345678899999999999999999999


Q ss_pred             hHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEE
Q 024553           85 LLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSV  164 (266)
Q Consensus        85 ~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v  164 (266)
                      ++|.|++++ .++||++||..+.                       .....|+++|++++.++++++.++.   +++|++
T Consensus       131 ~~~~~~~~~-~g~iv~isS~~~~-----------------------~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v  183 (253)
T 3qiv_A          131 VYKKMTKRG-GGAIVNQSSTAAW-----------------------LYSNYYGLAKVGINGLTQQLSRELG---GRNIRI  183 (253)
T ss_dssp             HHHHHHHHT-CEEEEEECC----------------------------------CCHHHHHHHHHHHHHHTT---TTTEEE
T ss_pred             HHHHHHhcC-CCEEEEECCcccc-----------------------CCCchhHHHHHHHHHHHHHHHHHHh---hcCeEE
Confidence            999998876 7899999998852                       3446799999999999999999997   789999


Q ss_pred             EEecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCcccc
Q 024553          165 IAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  232 (266)
Q Consensus       165 ~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~~  232 (266)
                      +.|+||+|+|++.....+...........+++++.+|+|+|+.+++++... ...+|..+..++|..+.
T Consensus       184 ~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~~~~  252 (253)
T 3qiv_A          184 NAIAPGPIDTEANRTTTPKEMVDDIVKGLPLSRMGTPDDLVGMCLFLLSDEASWITGQIFNVDGGQIIR  252 (253)
T ss_dssp             EEEEC-------------------------------CCHHHHHHHHHHSGGGTTCCSCEEEC-------
T ss_pred             EEEEecCCcccchhhcCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCCeecC
Confidence            999999999998766433322222233345567779999999999655422 34579999988887653

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.95  E-value=2.3e-28  Score=200.69  Aligned_cols=189  Identities=21%  Similarity=0.263  Sum_probs=154.2

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++.+++.++|
T Consensus        53 ~~~~~~~~~D~~~~~~~~~~~~~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  126 (246)
T 2uvd_A           53 GSDAIAVRADVANAEDVTNMVKQTVD------VFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSR  126 (246)
T ss_dssp             TCCEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCcEEEEEcCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            34689999999999999999999988      5589999999999863  445678899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++++ .++||++||..+..                    +.++...|+++|+++..++++++.++.   +.+|+||+|
T Consensus       127 ~~~~~~-~g~iv~isS~~~~~--------------------~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v  182 (246)
T 2uvd_A          127 FMMRQR-HGRIVNIASVVGVT--------------------GNPGQANYVAAKAGVIGLTKTSAKELA---SRNITVNAI  182 (246)
T ss_dssp             HHHHHT-CEEEEEECCTHHHH--------------------CCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             HHHHcC-CcEEEEECCHHhcC--------------------CCCCCchHHHHHHHHHHHHHHHHHHhh---hcCeEEEEE
Confidence            998766 68999999988632                    345678899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      +||+++|++......... .......+++++.+|+++|+.+++++... ...+|..+..++|.
T Consensus       183 ~Pg~v~t~~~~~~~~~~~-~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~  244 (246)
T 2uvd_A          183 APGFIATDMTDVLDENIK-AEMLKLIPAAQFGEAQDIANAVTFFASDQSKYITGQTLNVDGGM  244 (246)
T ss_dssp             EECSBGGGCSSCCCTTHH-HHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             EeccccCcchhhcCHHHH-HHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCEEEECcCc
Confidence            999999998765432211 11112235567889999999999665322 34579888877774

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.95  E-value=1.2e-27  Score=198.00  Aligned_cols=190  Identities=18%  Similarity=0.140  Sum_probs=149.7

Q ss_pred             ccCCCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcc--eeeEcCCCCC----CCCc-CCCcccchhhhhhhhhH
Q 024553            6 SRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQ--LLINNAGILA----TSSR-LTPEGYDQMMSTNYIGA   78 (266)
Q Consensus         6 ~~~~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld--~lv~nAG~~~----~~~~-~~~~~~~~~~~~n~~~~   78 (266)
                      +.+++.++.++.||+++.++++++++++.+.+    .++++|  +||||||+..    +..+ .+.++|++++++|+.|+
T Consensus        55 ~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~----~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~  130 (259)
T 1oaa_A           55 AQQPDLKVVLAAADLGTEAGVQRLLSAVRELP----RPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSM  130 (259)
T ss_dssp             HHCTTSEEEEEECCTTSHHHHHHHHHHHHHSC----CCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHH
T ss_pred             hhCCCCeEEEEecCCCCHHHHHHHHHHHHhcc----ccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHH
Confidence            33345679999999999999999999997621    236788  9999999863    2344 57789999999999999


Q ss_pred             HHHHHhhHHHHhcC--CCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCC
Q 024553           79 FFLTKLLLPLLKNS--PVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGL  156 (266)
Q Consensus        79 ~~l~~~~~~~l~~~--~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~  156 (266)
                      +++++.++|.|+++  + .|+||++||..+.                    .+.++...|+++|++++.++++++.++. 
T Consensus       131 ~~l~~~~~~~~~~~~~~-~g~iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~-  188 (259)
T 1oaa_A          131 LCLTSGTLNAFQDSPGL-SKTVVNISSLCAL--------------------QPYKGWGLYCAGKAARDMLYQVLAAEEP-  188 (259)
T ss_dssp             HHHHHHHHHTSCCCTTC-EEEEEEECCGGGT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHCT-
T ss_pred             HHHHHHHHHHHhhccCC-CceEEEEcCchhc--------------------CCCCCccHHHHHHHHHHHHHHHHHhhCC-
Confidence            99999999999876  4 6899999999873                    3566778899999999999999999984 


Q ss_pred             CCCCCeEEEEecCCcccCCccCcchh----HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeec
Q 024553          157 DKSRHVSVIAADPGVVKTNIMREVPS----FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFG  225 (266)
Q Consensus       157 ~~~~~i~v~~v~PG~v~T~~~~~~~~----~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~  225 (266)
                          +|+||+|+||+++|++......    ...........+++++.+|+++|+.+++++......+|..+..
T Consensus       189 ----~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~~~~~~itG~~i~v  257 (259)
T 1oaa_A          189 ----SVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLLGLLQKDTFQSGAHVDF  257 (259)
T ss_dssp             ----TEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHHHHHHHHCCSCTTEEEET
T ss_pred             ----CceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhhcCCcCCHHHHHHHHHHHHhhccccCCcEEec
Confidence                3999999999999998654321    1111122233466788999999999997775444567776653

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.95  E-value=7.6e-29  Score=208.50  Aligned_cols=190  Identities=18%  Similarity=0.159  Sum_probs=155.3

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC---CCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..   +..+.+.++|++++++|+.|++++++.++
T Consensus        96 ~~~~~~~~~Dv~d~~~v~~~~~~~~~------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~  169 (291)
T 3ijr_A           96 GVKCVLLPGDLSDEQHCKDIVQETVR------QLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAAL  169 (291)
T ss_dssp             TCCEEEEESCTTSHHHHHHHHHHHHH------HHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CCcEEEEECCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            45799999999999999999999998      5689999999999863   34567889999999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |+|++   .++||++||..+..                    +.+....|+++|++++.++++++.++.   +.+|+||+
T Consensus       170 ~~~~~---~g~iv~isS~~~~~--------------------~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gi~vn~  223 (291)
T 3ijr_A          170 SHLKQ---GDVIINTASIVAYE--------------------GNETLIDYSATKGAIVAFTRSLSQSLV---QKGIRVNG  223 (291)
T ss_dssp             TTCCT---TCEEEEECCTHHHH--------------------CCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEE
T ss_pred             HHHhh---CCEEEEEechHhcC--------------------CCCCChhHHHHHHHHHHHHHHHHHHHh---hcCEEEEE
Confidence            99965   57999999998743                    456678899999999999999999997   78999999


Q ss_pred             ecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCccc
Q 024553          167 ADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  231 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~  231 (266)
                      |+||+|+|++............+....+++++.+|+|+|+.+++++... ...+|..+..++|..+
T Consensus       224 v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  289 (291)
T 3ijr_A          224 VAPGPIWTPLIPSSFDEKKVSQFGSNVPMQRPGQPYELAPAYVYLASSDSSYVTGQMIHVNGGVIV  289 (291)
T ss_dssp             EEECSBCSTHHHHHSCHHHHHHTTTTSTTSSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESSSCCC
T ss_pred             EeeCCCcCCcccccCCHHHHHHHHccCCCCCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCCccc
Confidence            9999999998644222222222222345677889999999999654322 3568999988888654

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.95  E-value=3.2e-28  Score=200.55  Aligned_cols=172  Identities=13%  Similarity=0.066  Sum_probs=130.9

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      . +++|+||||||+..  +..+.+.++|++++++|+.|++.+++.++|
T Consensus        55 ~~~~~~~~~Dv~~~~~v~~~~~~~~~------~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  127 (252)
T 3h7a_A           55 GGRIVARSLDARNEDEVTAFLNAADA------H-APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESAR  127 (252)
T ss_dssp             TCEEEEEECCTTCHHHHHHHHHHHHH------H-SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCeEEEEECcCCCHHHHHHHHHHHHh------h-CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            45799999999999999999999998      6 89999999999874  456788999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEE-EE
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSV-IA  166 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v-~~  166 (266)
                      .|++++ .|+||++||..+.                    .+.++...|++||+++..++++++.++.   +.+|+| |+
T Consensus       128 ~~~~~~-~g~iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gi~v~n~  183 (252)
T 3h7a_A          128 LMLAHG-QGKIFFTGATASL--------------------RGGSGFAAFASAKFGLRAVAQSMARELM---PKNIHVAHL  183 (252)
T ss_dssp             HHHHHT-CEEEEEEEEGGGT--------------------CCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             HHHhcC-CcEEEEECCHHHc--------------------CCCCCCccHHHHHHHHHHHHHHHHHHhh---hcCCEEEEE
Confidence            998876 7899999999873                    3567788999999999999999999997   789999 99


Q ss_pred             ecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Q 024553          167 ADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA  214 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~  214 (266)
                      |+||+|+|++.....+... .......+.+ +.+|+++|+.+++++..
T Consensus       184 v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~-~~~pedvA~~~~~l~s~  229 (252)
T 3h7a_A          184 IIDSGVDTAWVRERREQMF-GKDALANPDL-LMPPAAVAGAYWQLYQQ  229 (252)
T ss_dssp             EEC-----------------------------CCHHHHHHHHHHHHHC
T ss_pred             ecCCccCChhhhccchhhh-hhhhhcCCcc-CCCHHHHHHHHHHHHhC
Confidence            9999999999876533221 1111222344 67999999999966543

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.95  E-value=3.5e-28  Score=201.26  Aligned_cols=188  Identities=15%  Similarity=0.129  Sum_probs=150.1

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.||+++.++++++++++.+      .++ +|+||||||+..  +..+.+.++|++++++|+.|++.+++.++|.
T Consensus        58 ~~~~~~~~D~~~~~~v~~~~~~~~~------~~g-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~  130 (260)
T 2z1n_A           58 AQVDIVAGDIREPGDIDRLFEKARD------LGG-ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQ  130 (260)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHH------TTC-CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             CeEEEEEccCCCHHHHHHHHHHHHH------hcC-CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            3789999999999999999999998      667 999999999863  4456788999999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |++++ .++||++||..+.                    .+.++...|+.+|+++..++++++.++.   +.+|++|+|+
T Consensus       131 ~~~~~-~g~iv~isS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~  186 (260)
T 2z1n_A          131 MVEKG-WGRMVYIGSVTLL--------------------RPWQDLALSNIMRLPVIGVVRTLALELA---PHGVTVNAVL  186 (260)
T ss_dssp             HHHHT-CEEEEEECCGGGT--------------------SCCTTBHHHHHHTHHHHHHHHHHHHHHG---GGTEEEEEEE
T ss_pred             HHhcC-CcEEEEECchhhc--------------------CCCCCCchhHHHHHHHHHHHHHHHHHHh---hhCeEEEEEE
Confidence            98766 7899999998873                    2456678899999999999999999997   7899999999


Q ss_pred             CCcccCCccCc----------chhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          169 PGVVKTNIMRE----------VPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       169 PG~v~T~~~~~----------~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      ||++.|++...          ..............+++++.+|+|+|+.+++++... ...+|..+..++|.
T Consensus       187 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~~tG~~i~vdGG~  258 (260)
T 2z1n_A          187 PSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFLASEKASFITGAVIPVDGGA  258 (260)
T ss_dssp             ECHHHHCCCC-----------------------CCTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             ECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            99999998762          111100111111225567889999999999654332 35679988877763

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.95  E-value=4.1e-28  Score=200.41  Aligned_cols=192  Identities=22%  Similarity=0.258  Sum_probs=153.2

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.+++.+++.++|
T Consensus        50 ~~~~~~~~~D~~~~~~v~~~~~~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  123 (256)
T 1geg_A           50 GGHAVAVKVDVSDRDQVFAAVEQARK------TLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVE  123 (256)
T ss_dssp             TCCEEEEECCTTSHHHHHHHHHHHHH------HTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCcEEEEEecCCCHHHHHHHHHHHHH------HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            34689999999999999999999988      6689999999999863  455678899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++++..++||++||..+.                    .+.+....|+.+|++++.++++++.++.   +.+|+||+|
T Consensus       124 ~~~~~~~~g~iv~isS~~~~--------------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v  180 (256)
T 1geg_A          124 AFKKEGHGGKIINACSQAGH--------------------VGNPELAVYSSSKFAVRGLTQTAARDLA---PLGITVNGY  180 (256)
T ss_dssp             HHHHHTSCEEEEEECCGGGT--------------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             HHHhcCCCCEEEEECchhhc--------------------CCCCCchhHHHHHHHHHHHHHHHHHHHH---HcCeEEEEE
Confidence            99865324799999998863                    3456678899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchh----------HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCcc
Q 024553          168 DPGVVKTNIMREVPS----------FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  230 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~----------~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~  230 (266)
                      +||+++|++......          ...........+++++.+|+|+|+.+++++... ...+|..+..++|..
T Consensus       181 ~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  254 (256)
T 1geg_A          181 CPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGMV  254 (256)
T ss_dssp             EECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             EECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCCcc
Confidence            999999998654210          000011111124567889999999999665432 246899988777753

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.95  E-value=6.9e-28  Score=200.71  Aligned_cols=178  Identities=17%  Similarity=0.172  Sum_probs=136.7

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC---CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      .++.++.||+++.++++++++++.+      .++++|+||||||+..   +..+.+.++|++++++|+.|++++++.++|
T Consensus        74 ~~~~~~~~Dv~d~~~v~~~~~~~~~------~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~  147 (272)
T 4dyv_A           74 DDALCVPTDVTDPDSVRALFTATVE------KFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFR  147 (272)
T ss_dssp             SCCEEEECCTTSHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCeEEEEecCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHH
Confidence            4688999999999999999999998      5689999999999863   456788999999999999999999999999


Q ss_pred             HHhcCC-CCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           88 LLKNSP-VPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        88 ~l~~~~-~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      .|++++ ..|+||++||..+.                    .+.++...|+++|++++.++++++.++.   +.+|+||+
T Consensus       148 ~~~~~~~~~g~IV~isS~~~~--------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~  204 (272)
T 4dyv_A          148 VMKAQEPRGGRIINNGSISAT--------------------SPRPYSAPYTATKHAITGLTKSTSLDGR---VHDIACGQ  204 (272)
T ss_dssp             HHHHSSSCCEEEEEECCSSTT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEE
T ss_pred             HHHhCCCCCcEEEEECchhhc--------------------CCCCCchHHHHHHHHHHHHHHHHHHHhC---ccCEEEEE
Confidence            998764 25899999999873                    3566778899999999999999999997   78999999


Q ss_pred             ecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcc
Q 024553          167 ADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETS  219 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~  219 (266)
                      |+||+|+|++...........  ....+.+++.+|+|+|+.+++++..+....
T Consensus       205 v~PG~v~T~~~~~~~~~~~~~--~~~~~~~~~~~pedvA~~v~fL~s~~~~~~  255 (272)
T 4dyv_A          205 IDIGNADTPMAQKMKAGVPQA--DLSIKVEPVMDVAHVASAVVYMASLPLDAN  255 (272)
T ss_dssp             EEEEECC--------------------------CHHHHHHHHHHHHHSCTTSC
T ss_pred             EEECcccChhhhhhcccchhh--hhcccccCCCCHHHHHHHHHHHhCCCCcCc
Confidence            999999999987653322111  112344566799999999998776665543

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.95  E-value=8.7e-28  Score=199.20  Aligned_cols=195  Identities=15%  Similarity=0.162  Sum_probs=155.8

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC----CCCCcCCCcccchhhhhhhhhHHHHHHhh
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL----ATSSRLTPEGYDQMMSTNYIGAFFLTKLL   85 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~   85 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+.    .+..+.+.++|++++++|+.|++.+++.+
T Consensus        56 ~~~~~~~~~Dl~~~~~v~~~~~~~~~------~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~  129 (264)
T 3i4f_A           56 EERLQFVQADVTKKEDLHKIVEEAMS------HFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLV  129 (264)
T ss_dssp             GGGEEEEECCTTSHHHHHHHHHHHHH------HHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             CCceEEEEecCCCHHHHHHHHHHHHH------HhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHH
Confidence            35799999999999999999999998      558999999999943    34567788999999999999999999999


Q ss_pred             HHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEE
Q 024553           86 LPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVI  165 (266)
Q Consensus        86 ~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~  165 (266)
                      +|.|++++ .++||++||..+..                  ..+.++...|+++|++++.++++++.++.   +.+|+|+
T Consensus       130 ~~~~~~~~-~g~iv~iss~~~~~------------------~~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~v~  187 (264)
T 3i4f_A          130 VPVMRKQN-FGRIINYGFQGADS------------------APGWIYRSAFAAAKVGLVSLTKTVAYEEA---EYGITAN  187 (264)
T ss_dssp             HHHHHHHT-CEEEEEECCTTGGG------------------CCCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEE
T ss_pred             HHHHHhcC-CCeEEEEeechhcc------------------cCCCCCCchhHHHHHHHHHHHHHHHHHhh---hcCcEEE
Confidence            99998876 78999999984321                  23456678899999999999999999997   7899999


Q ss_pred             EecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCccccC
Q 024553          166 AADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVNS  233 (266)
Q Consensus       166 ~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~~~  233 (266)
                      +|+||+|.|++.....+... .......+++++.+|+|+|+.+++++... ...+|..+..++|-....
T Consensus       188 ~v~PG~v~t~~~~~~~~~~~-~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdGG~~~~~  255 (264)
T 3i4f_A          188 MVCPGDIIGEMKEATIQEAR-QLKEHNTPIGRSGTGEDIARTISFLCEDDSDMITGTIIEVTGAVDVIH  255 (264)
T ss_dssp             EEEECCCCGGGGSCCHHHHH-HC--------CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESCSCCCCC
T ss_pred             EEccCCccCccchhccHHHH-HHHhhcCCCCCCcCHHHHHHHHHHHcCcccCCCCCcEEEEcCceeecc
Confidence            99999999999887654322 12233456778889999999999665432 356899998888865543

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.95  E-value=2.4e-28  Score=201.01  Aligned_cols=189  Identities=23%  Similarity=0.246  Sum_probs=146.0

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++.+++.++|
T Consensus        53 ~~~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  126 (249)
T 2ew8_A           53 GRRVLTVKCDVSQPGDVEAFGKQVIS------TFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVP  126 (249)
T ss_dssp             TCCEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCcEEEEEeecCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            34689999999999999999999988      5589999999999863  445778899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++++ .++||++||..+..                    +.++...|+.+|++++.++++++.++.   +.+|+||+|
T Consensus       127 ~~~~~~-~g~iv~isS~~~~~--------------------~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v  182 (249)
T 2ew8_A          127 GMKRNG-WGRIINLTSTTYWL--------------------KIEAYTHYISTKAANIGFTRALASDLG---KDGITVNAI  182 (249)
T ss_dssp             HHHHHT-CEEEEEECCGGGGS--------------------CCSSCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             HHHHcC-CeEEEEEcchhhcc--------------------CCCCchhHHHHHHHHHHHHHHHHHHHH---hcCcEEEEE
Confidence            998766 78999999988742                    456678899999999999999999997   789999999


Q ss_pred             cCCcccCCccC-cchhH-HHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCc
Q 024553          168 DPGVVKTNIMR-EVPSF-LSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  229 (266)
Q Consensus       168 ~PG~v~T~~~~-~~~~~-~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~  229 (266)
                      +||+++|++.. ..... ........ .+++++.+|+|+|+.+++++.. +...+|..+..++|.
T Consensus       183 ~Pg~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdGG~  246 (249)
T 2ew8_A          183 APSLVRTATTEASALSAMFDVLPNML-QAIPRLQVPLDLTGAAAFLASDDASFITGQTLAVDGGM  246 (249)
T ss_dssp             EECCC------------------CTT-SSSCSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSSC
T ss_pred             ecCcCcCccchhccccchhhHHHHhh-CccCCCCCHHHHHHHHHHHcCcccCCCCCcEEEECCCc
Confidence            99999999876 32211 00000000 3456778999999999965432 124679988877774

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.95  E-value=5.8e-28  Score=205.46  Aligned_cols=193  Identities=23%  Similarity=0.262  Sum_probs=153.0

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++++++.++|
T Consensus       106 ~~~~~~~~~Dv~d~~~v~~~~~~~~~------~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  179 (317)
T 3oec_A          106 GRRIIARQADVRDLASLQAVVDEALA------EFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLP  179 (317)
T ss_dssp             TCCEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCeEEEEECCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            45799999999999999999999998      5689999999999873  456788899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++++..|+||++||..+.                    .+.++...|++||++++.++++++.++.   +.+|+||+|
T Consensus       180 ~m~~~~~~g~Iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v  236 (317)
T 3oec_A          180 SMIERGQGGSVIFVSSTVGL--------------------RGAPGQSHYAASKHGVQGLMLSLANEVG---RHNIRVNSV  236 (317)
T ss_dssp             HHHHTCSCEEEEEECCGGGS--------------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             HHHHcCCCCEEEEECcHHhc--------------------CCCCCCcchHHHHHHHHHHHHHHHHHHh---hcCeEEEEE
Confidence            99876546899999999873                    3566778999999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhH------------HH-HHHHHHHHHh-hcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCccc
Q 024553          168 DPGVVKTNIMREVPSF------------LS-LMAFTVLKLL-GLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  231 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~------------~~-~~~~~~~~~~-~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~  231 (266)
                      +||+|+|++.......            .. .......... +++.+|+|+|+.+++++.. +...+|..+..++|...
T Consensus       237 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~~  315 (317)
T 3oec_A          237 NPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLA  315 (317)
T ss_dssp             EECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTTTCSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             ecCcccCccccchhhhhhhhhhccccchhHHHHHHhhhccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchhh
Confidence            9999999976431100            00 0000000000 4567999999999944321 12457999988888654

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.95  E-value=1.4e-27  Score=195.88  Aligned_cols=187  Identities=19%  Similarity=0.192  Sum_probs=153.1

Q ss_pred             EEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           13 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        13 ~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      +.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++.+++.++|.|+
T Consensus        51 ~~~~~~D~~~~~~~~~~~~~~~~------~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~  124 (245)
T 1uls_A           51 AHPVVMDVADPASVERGFAEALA------HLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMR  124 (245)
T ss_dssp             CEEEECCTTCHHHHHHHHHHHHH------HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CEEEEecCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence            78899999999999999999988      5589999999999863  446778899999999999999999999999998


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                      +++ .++||++||.. ..                    +.++...|+.+|+++..++++++.++.   +.+|+||+|+||
T Consensus       125 ~~~-~g~iv~isS~~-~~--------------------~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~PG  179 (245)
T 1uls_A          125 EKN-PGSIVLTASRV-YL--------------------GNLGQANYAASMAGVVGLTRTLALELG---RWGIRVNTLAPG  179 (245)
T ss_dssp             TTC-CEEEEEECCGG-GG--------------------CCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEEC
T ss_pred             hcC-CCEEEEEccch-hc--------------------CCCCchhHHHHHHHHHHHHHHHHHHHh---HhCeEEEEEEeC
Confidence            876 78999999987 32                    345567899999999999999999997   789999999999


Q ss_pred             cccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCccc
Q 024553          171 VVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  231 (266)
Q Consensus       171 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~  231 (266)
                      +++|++......... .......+++++.+|+++|+.+++++... ...+|..+..++|..+
T Consensus       180 ~v~t~~~~~~~~~~~-~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~  240 (245)
T 1uls_A          180 FIETRMTAKVPEKVR-EKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQVLFVDGGRTI  240 (245)
T ss_dssp             SBCCTTTSSSCHHHH-HHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             cCcCcchhhcCHHHH-HHHHhhCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECCCccc
Confidence            999998775433211 11112234567889999999999665432 3567999888887644

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.95  E-value=2.5e-28  Score=202.40  Aligned_cols=189  Identities=20%  Similarity=0.189  Sum_probs=152.0

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC---CCCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+.   .+..+.+.++|++++++|+.+++.+++.++
T Consensus        55 ~~~~~~~~~D~~~~~~~~~~~~~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~  128 (262)
T 1zem_A           55 GVEARSYVCDVTSEEAVIGTVDSVVR------DFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVS  128 (262)
T ss_dssp             TSCEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CCcEEEEEecCCCHHHHHHHHHHHHH------HhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            45789999999999999999999988      558999999999976   245677889999999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |.|++++ .++||++||..+..                    +.+....|+++|+++..++++++.++.   +.+|+||+
T Consensus       129 ~~~~~~~-~g~iv~isS~~~~~--------------------~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~vn~  184 (262)
T 1zem_A          129 RQMITQN-YGRIVNTASMAGVK--------------------GPPNMAAYGTSKGAIIALTETAALDLA---PYNIRVNA  184 (262)
T ss_dssp             HHHHHHT-CEEEEEECCHHHHS--------------------CCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEE
T ss_pred             HHHHhcC-CcEEEEEcchhhcc--------------------CCCCCchHHHHHHHHHHHHHHHHHHHH---hhCeEEEE
Confidence            9998766 78999999987632                    455678899999999999999999997   78999999


Q ss_pred             ecCCcccCCccCcc-------------h-hHH-HHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCC
Q 024553          167 ADPGVVKTNIMREV-------------P-SFL-SLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKG  228 (266)
Q Consensus       167 v~PG~v~T~~~~~~-------------~-~~~-~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g  228 (266)
                      |+||+++|++....             . ... .........+++++.+|+|+|+.+++++.. +...+|..+..++|
T Consensus       185 v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          185 ISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             EEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             EecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCcCCcEEecCCC
Confidence            99999999986432             1 011 111111223567888999999999965532 23457888776654

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.95  E-value=1.1e-28  Score=206.99  Aligned_cols=182  Identities=12%  Similarity=0.137  Sum_probs=149.4

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++++++.++|
T Consensus        64 ~~~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  137 (285)
T 3sc4_A           64 GGQALPIVGDIRDGDAVAAAVAKTVE------QFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIP  137 (285)
T ss_dssp             TSEEEEEECCTTSHHHHHHHHHHHHH------HHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             CCcEEEEECCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            45799999999999999999999998      5689999999999873  556788999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++++ .++||++||..+...                   .+++...|++||+++..++++++.+++   +.+|+||+|
T Consensus       138 ~m~~~~-~g~iv~isS~~~~~~-------------------~~~~~~~Y~asKaal~~~~~~la~e~~---~~gI~vn~v  194 (285)
T 3sc4_A          138 HMKGRD-NPHILTLSPPIRLEP-------------------KWLRPTPYMMAKYGMTLCALGIAEELR---DAGIASNTL  194 (285)
T ss_dssp             GTTTSS-SCEEEECCCCCCCSG-------------------GGSCSHHHHHHHHHHHHHHHHHHHHTG---GGTCEEEEE
T ss_pred             HHHHcC-CcEEEEECChhhccC-------------------CCCCCchHHHHHHHHHHHHHHHHHHhc---ccCcEEEEE
Confidence            998876 789999999886321                   124557899999999999999999997   789999999


Q ss_pred             cCC-cccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCC
Q 024553          168 DPG-VVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKG  228 (266)
Q Consensus       168 ~PG-~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g  228 (266)
                      +|| ++.|++.......        ..+++++.+|+++|+.+++++......+|..+..++|
T Consensus       195 ~PG~~v~t~~~~~~~~~--------~~~~~r~~~pedvA~~~~~l~s~~~~~tG~~i~~dgg  248 (285)
T 3sc4_A          195 WPRTTVATAAVQNLLGG--------DEAMARSRKPEVYADAAYVVLNKPSSYTGNTLLCEDV  248 (285)
T ss_dssp             ECSSCBCCHHHHHHHTS--------CCCCTTCBCTHHHHHHHHHHHTSCTTCCSCEEEHHHH
T ss_pred             eCCCccccHHHHhhccc--------cccccCCCCHHHHHHHHHHHhCCcccccceEEEEcCc
Confidence            999 6888775432110        1134567899999999996655444567887765443

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.95  E-value=1.3e-27  Score=198.16  Aligned_cols=191  Identities=19%  Similarity=0.204  Sum_probs=153.6

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.+++.+++.++|.
T Consensus        57 ~~~~~~~~D~~~~~~~~~~~~~~~~------~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  130 (263)
T 3ai3_A           57 VRVLEVAVDVATPEGVDAVVESVRS------SFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPG  130 (263)
T ss_dssp             CCEEEEECCTTSHHHHHHHHHHHHH------HHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CceEEEEcCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            4689999999999999999999988      5589999999999863  4567788999999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |++++ .++||++||..+..                    +.++...|+.+|++++.++++++.++.   +.+|++|+|+
T Consensus       131 ~~~~~-~g~iv~isS~~~~~--------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~  186 (263)
T 3ai3_A          131 MRARG-GGAIIHNASICAVQ--------------------PLWYEPIYNVTKAALMMFSKTLATEVI---KDNIRVNCIN  186 (263)
T ss_dssp             HHHHT-CEEEEEECCGGGTS--------------------CCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEE
T ss_pred             HHHcC-CcEEEEECchhhcC--------------------CCCCcchHHHHHHHHHHHHHHHHHHhh---hcCcEEEEEe
Confidence            98765 78999999988732                    455677899999999999999999997   7899999999


Q ss_pred             CCcccCCccCcchh---------HHHH-HHHHHH-HHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCccc
Q 024553          169 PGVVKTNIMREVPS---------FLSL-MAFTVL-KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  231 (266)
Q Consensus       169 PG~v~T~~~~~~~~---------~~~~-~~~~~~-~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~  231 (266)
                      ||+|.|++......         .... ...... .+++++.+|+|+|+.+++++... ...+|..+..++|...
T Consensus       187 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~  261 (263)
T 3ai3_A          187 PGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLCSERATYSVGSAYFVDGGMLK  261 (263)
T ss_dssp             ECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTCCC
T ss_pred             cCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccccCCCCcEEEECCCccc
Confidence            99999997654211         0111 111111 35667889999999999654322 2357988887877543

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.95  E-value=1.6e-27  Score=197.74  Aligned_cols=192  Identities=18%  Similarity=0.265  Sum_probs=154.8

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++.+++.++|.
T Consensus        46 ~~~~~~~~Dl~~~~~v~~~~~~~~~------~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  119 (264)
T 2dtx_A           46 AKYDHIECDVTNPDQVKASIDHIFK------EYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPY  119 (264)
T ss_dssp             CSSEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CceEEEEecCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            4678999999999999999999988      5589999999999863  4566788999999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |++++ .++||++||..+.                    .+.++...|+++|++++.++++++.++.   +. |+||+|+
T Consensus       120 ~~~~~-~g~iv~isS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~-i~vn~v~  174 (264)
T 2dtx_A          120 MIRSR-DPSIVNISSVQAS--------------------IITKNASAYVTSKHAVIGLTKSIALDYA---PL-LRCNAVC  174 (264)
T ss_dssp             HTTSS-SCEEEEECCGGGT--------------------SCCTTBHHHHHHHHHHHHHHHHHHHHHT---TT-SEEEEEE
T ss_pred             HHHcC-CcEEEEECCchhc--------------------cCCCCchhHHHHHHHHHHHHHHHHHHhc---CC-cEEEEEE
Confidence            98876 7899999998873                    3456678899999999999999999997   66 9999999


Q ss_pred             CCcccCCccCcch------hH----HHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCccccC
Q 024553          169 PGVVKTNIMREVP------SF----LSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVNS  233 (266)
Q Consensus       169 PG~v~T~~~~~~~------~~----~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~~~  233 (266)
                      ||+++|++.....      ..    ..........+++++.+|+|+|+.+++++... ...+|..+..++|.....
T Consensus       175 PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~~~  250 (264)
T 2dtx_A          175 PATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASREASFITGTCLYVDGGLSIRA  250 (264)
T ss_dssp             ECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             eCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCcccCC
Confidence            9999999865421      01    11111112235567889999999999665432 356799998888865543

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.95  E-value=1e-27  Score=198.42  Aligned_cols=192  Identities=21%  Similarity=0.269  Sum_probs=154.8

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCC-CCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMH-SSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~-~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      +.++.++.||+++.++++++++++.+      .+ +++|+||||||+..  +..+.+.++|++++++|+.|++.+++.++
T Consensus        57 ~~~~~~~~~D~~~~~~~~~~~~~~~~------~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~  130 (260)
T 2ae2_A           57 GFKVEASVCDLSSRSERQELMNTVAN------HFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAH  130 (260)
T ss_dssp             TCEEEEEECCTTCHHHHHHHHHHHHH------HTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CCcEEEEEcCCCCHHHHHHHHHHHHH------HcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            34789999999999999999999988      56 78999999999863  44567888999999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |+|++++ .++||++||..+.                    .+.+....|+.+|++++.++++++.++.   +.+|+||+
T Consensus       131 ~~~~~~~-~g~iv~isS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~  186 (260)
T 2ae2_A          131 PFLKASE-RGNVVFISSVSGA--------------------LAVPYEAVYGATKGAMDQLTRCLAFEWA---KDNIRVNG  186 (260)
T ss_dssp             HHHHHTS-SEEEEEECCGGGT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHTG---GGTEEEEE
T ss_pred             HHHHhcC-CcEEEEEcchhhc--------------------cCCCCcchHHHHHHHHHHHHHHHHHHHh---hcCcEEEE
Confidence            9998876 7899999998863                    2456678899999999999999999997   78999999


Q ss_pred             ecCCcccCCccCcchhHHHH-H---HHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCccc
Q 024553          167 ADPGVVKTNIMREVPSFLSL-M---AFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  231 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~~~~~-~---~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~  231 (266)
                      |+||+++|++.......... .   ......+++++.+|+|+|+.+++++... ...+|..+..++|...
T Consensus       187 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~  256 (260)
T 2ae2_A          187 VGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGLMA  256 (260)
T ss_dssp             EEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             EecCCCCCcchhhhccChhhHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCCccc
Confidence            99999999986432111100 1   1112235567889999999999655322 2457998888888654

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.95  E-value=1.4e-27  Score=196.59  Aligned_cols=188  Identities=21%  Similarity=0.190  Sum_probs=141.3

Q ss_pred             EEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           13 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        13 ~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      +.++.+|+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.+++.+++.++|+|+
T Consensus        48 ~~~~~~D~~d~~~~~~~~~~~~~------~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~  121 (250)
T 2fwm_X           48 FATEVMDVADAAQVAQVCQRLLA------ETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFR  121 (250)
T ss_dssp             SEEEECCTTCHHHHHHHHHHHHH------HCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             ceEEEcCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence            67899999999999999999988      6789999999999863  456778899999999999999999999999998


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                      +++ .++||++||..+.                    .+.++...|+.+|++++.++++++.++.   +.+|++|+|+||
T Consensus       122 ~~~-~g~iv~isS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg  177 (250)
T 2fwm_X          122 RQR-GGAIVTVASDAAH--------------------TPRIGMSAYGASKAALKSLALSVGLELA---GSGVRCNVVSPG  177 (250)
T ss_dssp             HHT-CCEEEEECCGGGT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEEC
T ss_pred             hcC-CCEEEEECchhhC--------------------CCCCCCchHHHHHHHHHHHHHHHHHHhC---ccCCEEEEEECC
Confidence            766 7899999998873                    3556678899999999999999999997   789999999999


Q ss_pred             cccCCccCcchhHHHH-H-HHHH-------HHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCcc
Q 024553          171 VVKTNIMREVPSFLSL-M-AFTV-------LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  230 (266)
Q Consensus       171 ~v~T~~~~~~~~~~~~-~-~~~~-------~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~  230 (266)
                      +++|++.......... . ....       ..+++++.+|+++|+.+++++... ...+|..+..++|..
T Consensus       178 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  247 (250)
T 2fwm_X          178 STDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDLASHITLQDIVVDGGST  247 (250)
T ss_dssp             CC------------------------------------CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             cccCccccccccChhHHHHHHhhhhhcccccCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            9999986543111000 0 1111       235567789999999999665432 356899888777753

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.95  E-value=1.2e-27  Score=201.15  Aligned_cols=190  Identities=16%  Similarity=0.135  Sum_probs=152.5

Q ss_pred             CccEEEEEecCCCHH-----------------HHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCC-------
Q 024553           10 DARLEAFQVDLSSFQ-----------------SVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLT-------   63 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~-----------------~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~-------   63 (266)
                      +.++.++.||+++.+                 +++++++++.+      .++++|+||||||+..  +..+.+       
T Consensus        59 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~  132 (291)
T 1e7w_A           59 PNSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYT------HWGRCDVLVNNASSFYPTPLLRNDEDGHEPC  132 (291)
T ss_dssp             TTCEEEEECCCSSSCBCCCC----CCCBCHHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCCCC---------
T ss_pred             CCeeEEEEeecCCcccccccccccccccchHHHHHHHHHHHHH------hcCCCCEEEECCCCCCCCChhhcCccccccc
Confidence            357899999999999                 99999999988      5589999999999863  445666       


Q ss_pred             -------CcccchhhhhhhhhHHHHHHhhHHHHhcCCC-----CCeEEEEcCCcccccccccCCccccccCcccCCCCCC
Q 024553           64 -------PEGYDQMMSTNYIGAFFLTKLLLPLLKNSPV-----PSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYP  131 (266)
Q Consensus        64 -------~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-----~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (266)
                             .++|++++++|+.+++.+++.++|+|++++.     .++||++||..+.                    .+.+
T Consensus       133 ~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~--------------------~~~~  192 (291)
T 1e7w_A          133 VGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTN--------------------QPLL  192 (291)
T ss_dssp             ----HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTT--------------------SCCT
T ss_pred             cccccccHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEechhhc--------------------CCCC
Confidence                   7889999999999999999999999987541     4899999998873                    3566


Q ss_pred             hhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcccCCccCcchhHHHHHHHHHHHHhh-cCCCHHHHHHHHHH
Q 024553          132 CARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG-LLQSPEKGINSVLD  210 (266)
Q Consensus       132 ~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~a~~~~~  210 (266)
                      +...|+++|+++..++++++.++.   +.+|+||+|+||+|+|++ . ..+.. ........+++ ++.+|+++|+.+++
T Consensus       193 ~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v~PG~v~T~~-~-~~~~~-~~~~~~~~p~~~r~~~pedvA~~v~~  266 (291)
T 1e7w_A          193 GYTIYTMAKGALEGLTRSAALELA---PLQIRVNGVGPGLSVLVD-D-MPPAV-WEGHRSKVPLYQRDSSAAEVSDVVIF  266 (291)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEESSBCCGG-G-SCHHH-HHHHHTTCTTTTSCBCHHHHHHHHHH
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHH---hcCeEEEEEeeCCccCCc-c-CCHHH-HHHHHhhCCCCCCCCCHHHHHHHHHH
Confidence            778999999999999999999997   789999999999999998 4 32211 11111223556 78899999999996


Q ss_pred             HhcC-CCCcccceeecCCCccc
Q 024553          211 AALA-PPETSGVYFFGGKGRTV  231 (266)
Q Consensus       211 ~~~~-~~~~~G~~~~~~~g~~~  231 (266)
                      ++.. ....+|.++..++|..+
T Consensus       267 l~s~~~~~itG~~i~vdGG~~~  288 (291)
T 1e7w_A          267 LCSSKAKYITGTCVKVDGGYSL  288 (291)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGG
T ss_pred             HhCCcccCccCcEEEECCCccc
Confidence            6542 23568999888877543

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.95  E-value=3.6e-28  Score=201.82  Aligned_cols=188  Identities=19%  Similarity=0.201  Sum_probs=153.6

Q ss_pred             EEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           14 EAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        14 ~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      ..+.+|+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++.+++.++|+|++
T Consensus        69 ~~~~~Dv~~~~~~~~~~~~~~~------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~  142 (266)
T 3uxy_A           69 LHLPGDLREAAYADGLPGAVAA------GLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAA  142 (266)
T ss_dssp             EECCCCTTSHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             hccCcCCCCHHHHHHHHHHHHH------hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence            4568999999999999999988      5589999999999874  4567789999999999999999999999999988


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCc
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV  171 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~  171 (266)
                      ++ .++||++||..+.                    .+.++...|++||++++.++++++.++.   +.+|+||+|+||+
T Consensus       143 ~~-~g~iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v~PG~  198 (266)
T 3uxy_A          143 AG-GGAIVNVASCWGL--------------------RPGPGHALYCLTKAALASLTQCMGMDHA---PQGIRINAVCPNE  198 (266)
T ss_dssp             HT-CEEEEEECCSBTT--------------------BCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEESS
T ss_pred             cC-CcEEEEECCHHhC--------------------CCCCCChHHHHHHHHHHHHHHHHHHHhh---hcCcEEEEEeeCC
Confidence            76 7899999999873                    3566778999999999999999999997   7899999999999


Q ss_pred             ccCCccCcchhH------HHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCccc
Q 024553          172 VKTNIMREVPSF------LSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  231 (266)
Q Consensus       172 v~T~~~~~~~~~------~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~  231 (266)
                      |+|++.......      ..........+++++.+|+|+|+.+++++... ...+|..+..++|..+
T Consensus       199 v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 3uxy_A          199 VNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLASDAARYLCGSLVEVNGGKAV  265 (266)
T ss_dssp             BCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             CcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECcCEeC
Confidence            999986542211      11111222335677889999999999655432 3567999988888653

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.95  E-value=1.3e-27  Score=199.58  Aligned_cols=187  Identities=22%  Similarity=0.268  Sum_probs=151.6

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      ++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++.+++.++|.|
T Consensus        78 ~~~~~~~Dv~d~~~v~~~~~~~~~------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m  151 (276)
T 2b4q_A           78 DCQAIPADLSSEAGARRLAQALGE------LSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLL  151 (276)
T ss_dssp             CEEECCCCTTSHHHHHHHHHHHHH------HCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             ceEEEEeeCCCHHHHHHHHHHHHH------hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            688999999999999999999988      6689999999999863  45677889999999999999999999999999


Q ss_pred             hcCCCC----CeEEEEcCCcccccccccCCccccccCcccCCCCCChhh-cchHhHHHHHHHHHHHHHhhCCCCCCCeEE
Q 024553           90 KNSPVP----SRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCAR-IYEYSKLCLLIFSYELHRNLGLDKSRHVSV  164 (266)
Q Consensus        90 ~~~~~~----~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v  164 (266)
                      ++++ .    ++||++||..+..                    +.+... .|+++|++++.++++++.++.   +.+|+|
T Consensus       152 ~~~~-~~~~~g~iV~isS~~~~~--------------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gI~v  207 (276)
T 2b4q_A          152 RRSA-SAENPARVINIGSVAGIS--------------------AMGEQAYAYGPSKAALHQLSRMLAKELV---GEHINV  207 (276)
T ss_dssp             HHHC-CSSSCEEEEEECCGGGTC--------------------CCCCSCTTHHHHHHHHHHHHHHHHHHHG---GGTEEE
T ss_pred             Hhcc-CCCCCCEEEEECCHHHcC--------------------CCCCCccccHHHHHHHHHHHHHHHHHhc---ccCeEE
Confidence            8654 3    8999999988632                    334445 899999999999999999997   789999


Q ss_pred             EEecCCcccCCccCcchhHHHHHHHHH--HHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          165 IAADPGVVKTNIMREVPSFLSLMAFTV--LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       165 ~~v~PG~v~T~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      |+|+||+++|++........ ......  ..+++++.+|+|+|+.+++++... ...+|..+..++|.
T Consensus       208 n~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  274 (276)
T 2b4q_A          208 NVIAPGRFPSRMTRHIANDP-QALEADSASIPMGRWGRPEEMAALAISLAGTAGAYMTGNVIPIDGGF  274 (276)
T ss_dssp             EEEEECCCCSTTTHHHHHCH-HHHHHHHHTSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             EEEEeccCcCcchhhcchhH-HHHHHhhcCCCCCCcCCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            99999999999865432111 011111  235667889999999999765432 35679988877764

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.95  E-value=5.2e-28  Score=198.40  Aligned_cols=187  Identities=20%  Similarity=0.158  Sum_probs=151.6

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      ...+.++.||+++.++++++++.+.        .+++|+||||||+..  +..+.+.++|++++++|+.|++.+++.++|
T Consensus        43 ~~~~~~~~~Dv~~~~~v~~~~~~~~--------~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~  114 (244)
T 4e4y_A           43 AENLKFIKADLTKQQDITNVLDIIK--------NVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLEN  114 (244)
T ss_dssp             CTTEEEEECCTTCHHHHHHHHHHTT--------TCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGG
T ss_pred             cccceEEecCcCCHHHHHHHHHHHH--------hCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHH
Confidence            3468899999999999999996553        368999999999873  566788999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++   .++||++||..+.                    .+.++...|++||++++.++++++.++.   +.+|+||+|
T Consensus       115 ~~~~---~g~iv~~sS~~~~--------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~v~~v  168 (244)
T 4e4y_A          115 NLKV---GASIVFNGSDQCF--------------------IAKPNSFAYTLSKGAIAQMTKSLALDLA---KYQIRVNTV  168 (244)
T ss_dssp             GEEE---EEEEEEECCGGGT--------------------CCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEE
T ss_pred             Hhcc---CcEEEEECCHHHc--------------------cCCCCCchhHHHHHHHHHHHHHHHHHHH---HcCeEEEEE
Confidence            9977   4799999999873                    3567778999999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHH----------HHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCcc
Q 024553          168 DPGVVKTNIMREVPSFL----------SLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  230 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~----------~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~  230 (266)
                      +||+|+|++........          .........+++++.+|+|+|+.+++++... ...+|..+..++|..
T Consensus       169 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~  242 (244)
T 4e4y_A          169 CPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDKSKFMTGGLIPIDGGYT  242 (244)
T ss_dssp             EESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             ecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhcCccccccCCeEeECCCcc
Confidence            99999999876543221          1111122235567889999999999655432 356799998887754

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.95  E-value=8e-28  Score=198.21  Aligned_cols=180  Identities=22%  Similarity=0.236  Sum_probs=148.9

Q ss_pred             cEEEEEecC--CCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC---CCCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           12 RLEAFQVDL--SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        12 ~~~~i~~Dl--s~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      ++.++.+|+  ++.++++++++++.+      .++++|+||||||+.   .+..+.+.++|++++++|+.|++++++.++
T Consensus        63 ~~~~~~~D~~~~~~~~~~~~~~~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~  136 (252)
T 3f1l_A           63 QPQWFILDLLTCTSENCQQLAQRIAV------NYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALL  136 (252)
T ss_dssp             CCEEEECCTTTCCHHHHHHHHHHHHH------HCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CceEEEEecccCCHHHHHHHHHHHHH------hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence            678999999  999999999999998      678999999999985   356778899999999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |+|++++ .++||++||..+.                    .+.++...|+++|++++.++++++.++.   +. |+||+
T Consensus       137 ~~m~~~~-~g~iv~isS~~~~--------------------~~~~~~~~Y~asK~a~~~l~~~la~e~~---~~-irvn~  191 (252)
T 3f1l_A          137 PLLLKSD-AGSLVFTSSSVGR--------------------QGRANWGAYAASKFATEGMMQVLADEYQ---QR-LRVNC  191 (252)
T ss_dssp             HHHHTSS-SCEEEEECCGGGT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHTT---TT-CEEEE
T ss_pred             HHHHHCC-CCEEEEECChhhc--------------------cCCCCCchhHHHHHHHHHHHHHHHHHhc---CC-cEEEE
Confidence            9998877 7999999998873                    3566778899999999999999999996   45 99999


Q ss_pred             ecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCccc
Q 024553          167 ADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  231 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~  231 (266)
                      |+||+|+|++.....+..         ...++.+|+|+|+.+++++... ...+|..+..++|+..
T Consensus       192 v~PG~v~t~~~~~~~~~~---------~~~~~~~p~dva~~~~~L~s~~~~~itG~~i~vdgG~~~  248 (252)
T 3f1l_A          192 INPGGTRTAMRASAFPTE---------DPQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQPGRKP  248 (252)
T ss_dssp             EECCSBSSHHHHHHCTTC---------CGGGSBCTGGGHHHHHHHHSGGGTTCCSCEEESSCC---
T ss_pred             EecCcccCchhhhhCCcc---------chhccCCHHHHHHHHHHHcCccccCCCCCEEEeCCCcCC
Confidence            999999998754321110         1124569999999999654322 3568999998888754

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.95  E-value=1.3e-28  Score=202.76  Aligned_cols=181  Identities=17%  Similarity=0.206  Sum_probs=143.2

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.||+++.++++++++++.+      .++++|+||||||+..  +. +.+.++|++++++|+.|++.+++.++|.
T Consensus        59 ~~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~iD~lvnnAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~  131 (250)
T 3nyw_A           59 QEPIVLPLDITDCTKADTEIKDIHQ------KYGAVDILVNAAAMFMDGSL-SEPVDNFRKIMEINVIAQYGILKTVTEI  131 (250)
T ss_dssp             CCCEEEECCTTCHHHHHHHHHHHHH------HHCCEEEEEECCCCCCCCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CcceEEeccCCCHHHHHHHHHHHHH------hcCCCCEEEECCCcCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6789999999999999999999998      5689999999999873  33 6678899999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |++++ .++||++||..+..                    +.++...|+++|+++..++++++.++.   +.+|+||+|+
T Consensus       132 ~~~~~-~g~iv~isS~~~~~--------------------~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gi~vn~v~  187 (250)
T 3nyw_A          132 MKVQK-NGYIFNVASRAAKY--------------------GFADGGIYGSTKFALLGLAESLYRELA---PLGIRVTTLC  187 (250)
T ss_dssp             HHHHT-CEEEEEECC---------------------------CCTTHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEE
T ss_pred             HHhCC-CeEEEEEccHHhcC--------------------CCCCCcchHHHHHHHHHHHHHHHHHhh---hcCcEEEEEe
Confidence            98776 78999999988732                    233467899999999999999999997   7899999999


Q ss_pred             CCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCC--cccceeecCCCccc
Q 024553          169 PGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPE--TSGVYFFGGKGRTV  231 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~--~~G~~~~~~~g~~~  231 (266)
                      ||+|+|++.......         .+.+++.+|+|+|+.+++++..+..  .++..+..++|+..
T Consensus       188 PG~v~T~~~~~~~~~---------~~~~~~~~p~dva~~v~~l~s~~~~~~~~~~~i~vd~~~~~  243 (250)
T 3nyw_A          188 PGWVNTDMAKKAGTP---------FKDEEMIQPDDLLNTIRCLLNLSENVCIKDIVFEMKKSIIE  243 (250)
T ss_dssp             ESSBCSHHHHHTTCC---------SCGGGSBCHHHHHHHHHHHHTSCTTEECCEEEEEEHHHHHC
T ss_pred             cCcccCchhhhcCCC---------cccccCCCHHHHHHHHHHHHcCCCceEeeEEEEEeeccccc
Confidence            999999986543211         1234567999999999966544332  24555555555433

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.95  E-value=1.6e-27  Score=196.48  Aligned_cols=188  Identities=22%  Similarity=0.274  Sum_probs=146.5

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      .+.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.+++.+++.++|.|
T Consensus        60 ~~~~~~~Dl~d~~~v~~~~~~~~~------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m  133 (253)
T 2nm0_A           60 GFLAVKCDITDTEQVEQAYKEIEE------THGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAM  133 (253)
T ss_dssp             TSEEEECCTTSHHHHHHHHHHHHH------HTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cceEEEecCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            367899999999999999999988      6689999999999863  45577899999999999999999999999999


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      ++++ .++||++||..+.                    .+.+....|+++|++++.++++++.++.   +.+|++|+|+|
T Consensus       134 ~~~~-~g~iv~isS~~~~--------------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~vn~v~P  189 (253)
T 2nm0_A          134 LRAK-KGRVVLISSVVGL--------------------LGSAGQANYAASKAGLVGFARSLARELG---SRNITFNVVAP  189 (253)
T ss_dssp             HHHT-CEEEEEECCCCCC--------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHC---SSSEEEEEEEE
T ss_pred             HhcC-CCEEEEECchhhC--------------------CCCCCcHHHHHHHHHHHHHHHHHHHHhh---hcCeEEEEEEe
Confidence            8765 7899999998863                    2445678899999999999999999998   78999999999


Q ss_pred             CcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCcc
Q 024553          170 GVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  230 (266)
Q Consensus       170 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~  230 (266)
                      |+|+|++......... .......+++++.+|+++|+.+++++... ...+|..+..++|..
T Consensus       190 G~v~T~~~~~~~~~~~-~~~~~~~p~~~~~~p~dvA~~i~~l~s~~~~~~tG~~i~vdGG~~  250 (253)
T 2nm0_A          190 GFVDTDMTKVLTDEQR-ANIVSQVPLGRYARPEEIAATVRFLASDDASYITGAVIPVDGGLG  250 (253)
T ss_dssp             CSBCC---------CH-HHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CcCcCcchhhcCHHHH-HHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCcEEEECCccc
Confidence            9999998764322111 11111224567789999999999665432 346899988777753

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.95  E-value=3.6e-28  Score=206.76  Aligned_cols=202  Identities=20%  Similarity=0.196  Sum_probs=162.4

Q ss_pred             EecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCC
Q 024553           17 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPV   94 (266)
Q Consensus        17 ~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~   94 (266)
                      .+|+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|+.++++|+.|++++++.++|+|++++ 
T Consensus        70 ~~D~~~~~~~~~~~~~~~~------~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-  142 (319)
T 1gz6_A           70 VANYDSVEAGEKLVKTALD------TFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-  142 (319)
T ss_dssp             EEECCCGGGHHHHHHHHHH------HTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             EEeCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-
Confidence            5899999999999999988      5689999999999874  345678899999999999999999999999998776 


Q ss_pred             CCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcccC
Q 024553           95 PSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKT  174 (266)
Q Consensus        95 ~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~T  174 (266)
                      .++||++||..+..                    +.++...|+.||+++..+++++++++.   +.+|+||+|+||++ |
T Consensus       143 ~grIV~vsS~~~~~--------------------~~~~~~~Y~aSK~a~~~~~~~la~el~---~~gI~vn~v~PG~~-t  198 (319)
T 1gz6_A          143 YGRIIMTASASGIY--------------------GNFGQANYSAAKLGLLGLANTLVIEGR---KNNIHCNTIAPNAG-S  198 (319)
T ss_dssp             CEEEEEECCHHHHH--------------------CCTTCHHHHHHHHHHHHHHHHHHHHTG---GGTEEEEEEEEECC-S
T ss_pred             CCEEEEECChhhcc--------------------CCCCCHHHHHHHHHHHHHHHHHHHHhc---ccCEEEEEEeCCCc-c
Confidence            78999999987632                    344567899999999999999999997   78999999999998 8


Q ss_pred             CccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCccc------------cCCccccCHHH
Q 024553          175 NIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV------------NSSALSFNSKL  242 (266)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~------------~~~~~~~~~~~  242 (266)
                      ++.....+.. .         ....+|+++|..+++++..+...+|.+|..++|...            .......+++.
T Consensus       199 ~~~~~~~~~~-~---------~~~~~p~dvA~~~~~l~s~~~~~tG~~~~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (319)
T 1gz6_A          199 RMTETVMPED-L---------VEALKPEYVAPLVLWLCHESCEENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEA  268 (319)
T ss_dssp             TTTGGGSCHH-H---------HHHSCGGGTHHHHHHHTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHH
T ss_pred             ccccccCChh-h---------hccCCHHHHHHHHHHHhCchhhcCCCEEEECCCeEEEEeeeeccceeccCCCCCCCHHH
Confidence            8765421110 0         012499999999997665544567888876666322            11245679999


Q ss_pred             HHHHHHHHHHHhhhccc
Q 024553          243 AGELWTTSCNLFINSQL  259 (266)
Q Consensus       243 ~~~~~~~~~~~~~~~~~  259 (266)
                      ++++|+.++++.+...|
T Consensus       269 ~~~lw~~~~~~~~~~~~  285 (319)
T 1gz6_A          269 VRDNWVKICDFSNASKP  285 (319)
T ss_dssp             HHHTHHHHTCCTTCBCC
T ss_pred             HHHHHHHhhccccccCC
Confidence            99999999998875544

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.95  E-value=1.3e-28  Score=207.45  Aligned_cols=190  Identities=17%  Similarity=0.170  Sum_probs=153.4

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC---CCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..   +..+.+.++|++++++|+.|++++++.++
T Consensus        99 ~~~~~~~~~Dv~d~~~v~~~~~~~~~------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~  172 (294)
T 3r3s_A           99 GRKAVLLPGDLSDESFARSLVHKARE------ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAI  172 (294)
T ss_dssp             TCCEEECCCCTTSHHHHHHHHHHHHH------HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred             CCcEEEEEecCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            45789999999999999999999998      5689999999999853   45677899999999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |.|++   .|+||++||..+.                    .+.++...|+++|++++.++++++.++.   +.+|+||+
T Consensus       173 ~~~~~---~g~Iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~  226 (294)
T 3r3s_A          173 PLLPK---GASIITTSSIQAY--------------------QPSPHLLDYAATKAAILNYSRGLAKQVA---EKGIRVNI  226 (294)
T ss_dssp             GGCCT---TCEEEEECCGGGT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEE
T ss_pred             HHhhc---CCEEEEECChhhc--------------------cCCCCchHHHHHHHHHHHHHHHHHHHHh---hcCeEEEE
Confidence            99965   5799999999873                    3566778899999999999999999997   78999999


Q ss_pred             ecCCcccCCccCcc-hhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCccc
Q 024553          167 ADPGVVKTNIMREV-PSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  231 (266)
Q Consensus       167 v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~  231 (266)
                      |+||+|+|++.... .............+++++.+|+|+|+.+++++.. +...+|..+..++|..+
T Consensus       227 v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~l  293 (294)
T 3r3s_A          227 VAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCGGEHL  293 (294)
T ss_dssp             EEECSBCSHHHHTTTSCGGGSTTTTTTSTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             EecCcCccccccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence            99999999873211 1111011112223567888999999999965432 23567999988888643

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.95  E-value=1.2e-27  Score=198.40  Aligned_cols=186  Identities=19%  Similarity=0.316  Sum_probs=138.5

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++++++.++|
T Consensus        52 ~~~~~~~~~Dv~d~~~v~~~~~~~~~------~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  125 (264)
T 3tfo_A           52 GGTALAQVLDVTDRHSVAAFAQAAVD------TWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLP  125 (264)
T ss_dssp             TCEEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCcEEEEEcCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            45789999999999999999999998      5689999999999873  456778999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++++ .|+||++||..+.                    .+.++...|+++|+++..++++++.++    + +|+||+|
T Consensus       126 ~m~~~~-~g~IV~isS~~~~--------------------~~~~~~~~Y~asKaal~~l~~~la~e~----~-gIrvn~v  179 (264)
T 3tfo_A          126 IMEAQR-SGQIINIGSIGAL--------------------SVVPTAAVYCATKFAVRAISDGLRQES----T-NIRVTCV  179 (264)
T ss_dssp             HHHHHT-CEEEEEECCGGGT--------------------CCCTTCHHHHHHHHHHHHHHHHHHHHC----S-SEEEEEE
T ss_pred             HHHhCC-CeEEEEEcCHHHc--------------------ccCCCChhHHHHHHHHHHHHHHHHHhC----C-CCEEEEE
Confidence            998776 7999999999873                    356777889999999999999999996    4 9999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCC-cccceeecCCCc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPE-TSGVYFFGGKGR  229 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~-~~G~~~~~~~g~  229 (266)
                      +||+|+|++..............  .......+|+|+|+.+++++..+.. ..|.....+.+.
T Consensus       180 ~PG~v~T~~~~~~~~~~~~~~~~--~~~~~~~~pedvA~~v~~l~s~~~~~~~~~i~i~p~~~  240 (264)
T 3tfo_A          180 NPGVVESELAGTITHEETMAAMD--TYRAIALQPADIARAVRQVIEAPQSVDTTEITIRPTAS  240 (264)
T ss_dssp             EECCC-------------------------CCCHHHHHHHHHHHHHSCTTEEEEEEEEEECC-
T ss_pred             ecCCCcCcccccccchhHHHHHH--hhhccCCCHHHHHHHHHHHhcCCccCccceEEEecCcc
Confidence            99999999986643322111110  0111246999999999976655432 345544434443

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.95  E-value=2e-27  Score=197.24  Aligned_cols=188  Identities=14%  Similarity=0.128  Sum_probs=151.2

Q ss_pred             EEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC------CCCc-CCCcccchhhhhhhhhHHHHHHhh
Q 024553           13 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA------TSSR-LTPEGYDQMMSTNYIGAFFLTKLL   85 (266)
Q Consensus        13 ~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~------~~~~-~~~~~~~~~~~~n~~~~~~l~~~~   85 (266)
                      ..++.||+++.++++++++++.+      .++++|+||||||+..      +..+ .+.++|++++++|+.+++++++.+
T Consensus        61 ~~~~~~D~~~~~~v~~~~~~~~~------~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~  134 (265)
T 1qsg_A           61 DIVLQCDVAEDASIDTMFAELGK------VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKAC  134 (265)
T ss_dssp             CCEEECCTTCHHHHHHHHHHHHT------TCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             cEEEEccCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence            47899999999999999999988      7789999999999864      2335 788899999999999999999999


Q ss_pred             HHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEE
Q 024553           86 LPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVI  165 (266)
Q Consensus        86 ~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~  165 (266)
                      +|.|++   .++||++||..+.                    .+.+....|+++|++++.++++++.++.   +.+|+||
T Consensus       135 ~~~~~~---~g~iv~isS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~  188 (265)
T 1qsg_A          135 RSMLNP---GSALLTLSYLGAE--------------------RAIPNYNVMGLAKASLEANVRYMANAMG---PEGVRVN  188 (265)
T ss_dssp             GGGEEE---EEEEEEEECGGGT--------------------SBCTTTTHHHHHHHHHHHHHHHHHHHHT---TTTEEEE
T ss_pred             HHHhcc---CCEEEEEcchhhc--------------------cCCCCchHHHHHHHHHHHHHHHHHHHhh---hcCeEEE
Confidence            999975   5799999998763                    2455667899999999999999999997   7899999


Q ss_pred             EecCCcccCCccCcchhHHHH-HHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCcccc
Q 024553          166 AADPGVVKTNIMREVPSFLSL-MAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  232 (266)
Q Consensus       166 ~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~~  232 (266)
                      +|+||+|+|++.......... .......+++++.+|+++|+.+++++... ...+|..+..++|....
T Consensus       189 ~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~  257 (265)
T 1qsg_A          189 AISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIA  257 (265)
T ss_dssp             EEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred             EEEeCCCccchhhcccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCccCCEEEECCCcCCC
Confidence            999999999987654321111 11122235667889999999999654321 24579988888886553

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.95  E-value=1.2e-27  Score=200.24  Aligned_cols=191  Identities=18%  Similarity=0.134  Sum_probs=149.9

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCC---CC----cCCCcccchhhhhhhhhHHHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT---SS----RLTPEGYDQMMSTNYIGAFFLT   82 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~---~~----~~~~~~~~~~~~~n~~~~~~l~   82 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+...   ..    +.+.++|++++++|+.|+++++
T Consensus        50 ~~~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~  123 (281)
T 3zv4_A           50 GGNAVGVVGDVRSLQDQKRAAERCLA------AFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAV  123 (281)
T ss_dssp             BTTEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHH
T ss_pred             CCcEEEEEcCCCCHHHHHHHHHHHHH------hcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHH
Confidence            45789999999999999999999998      56899999999998632   22    2234569999999999999999


Q ss_pred             HhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCe
Q 024553           83 KLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHV  162 (266)
Q Consensus        83 ~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i  162 (266)
                      +.++|+|+++  +++||++||..+.                    .+.+....|++||++++.++++++.++.   +. |
T Consensus       124 ~~~~~~~~~~--~g~iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~-I  177 (281)
T 3zv4_A          124 KACLPALVSS--RGSVVFTISNAGF--------------------YPNGGGPLYTATKHAVVGLVRQMAFELA---PH-V  177 (281)
T ss_dssp             HHHHHHHHHH--TCEEEEECCGGGT--------------------SSSSSCHHHHHHHHHHHHHHHHHHHHHT---TT-S
T ss_pred             HHHHHHHHhc--CCeEEEEecchhc--------------------cCCCCCchhHHHHHHHHHHHHHHHHHhc---CC-C
Confidence            9999999875  4899999998873                    3566678899999999999999999997   54 9


Q ss_pred             EEEEecCCcccCCccCcchhH---------HHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC--CCcccceeecCCCccc
Q 024553          163 SVIAADPGVVKTNIMREVPSF---------LSLMAFTVLKLLGLLQSPEKGINSVLDAALAP--PETSGVYFFGGKGRTV  231 (266)
Q Consensus       163 ~v~~v~PG~v~T~~~~~~~~~---------~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~--~~~~G~~~~~~~g~~~  231 (266)
                      +||+|+||+|+|++.......         ..........+++++.+|+|+|+.+++++..+  ...+|..+..++|..+
T Consensus       178 rvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~~~  257 (281)
T 3zv4_A          178 RVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVFFATRGDSLPATGALLNYDGGMGV  257 (281)
T ss_dssp             EEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSGGG
T ss_pred             EEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCCCCCCHHHHHHHHHHhhcccccccccCcEEEECCCCcc
Confidence            999999999999987542110         01111223346788999999999999655422  2368999998888765


Q ss_pred             c
Q 024553          232 N  232 (266)
Q Consensus       232 ~  232 (266)
                      .
T Consensus       258 ~  258 (281)
T 3zv4_A          258 R  258 (281)
T ss_dssp             C
T ss_pred             c
Confidence            3

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.95  E-value=2.1e-27  Score=196.49  Aligned_cols=192  Identities=18%  Similarity=0.214  Sum_probs=154.5

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC---CCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..   +..+.+.++|++++++|+.+++.+++.++
T Consensus        62 ~~~~~~~~~D~~~~~~~~~~~~~~~~------~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~  135 (260)
T 2zat_A           62 GLSVTGTVCHVGKAEDRERLVAMAVN------LHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVV  135 (260)
T ss_dssp             TCCEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CCceEEEEccCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            34688999999999999999999988      5589999999999753   44567888999999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |.|++++ .++||++||..+.                    .+.++...|+.+|++++.++++++.++.   +.+|+||+
T Consensus       136 ~~~~~~~-~g~iv~isS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~  191 (260)
T 2zat_A          136 PEMEKRG-GGSVLIVSSVGAY--------------------HPFPNLGPYNVSKTALLGLTKNLAVELA---PRNIRVNC  191 (260)
T ss_dssp             HHHHHTT-CEEEEEECCGGGT--------------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEE
T ss_pred             HHHHHcC-CCEEEEEechhhc--------------------CCCCCchhHHHHHHHHHHHHHHHHHHhc---ccCeEEEE
Confidence            9998876 7899999998873                    2456678899999999999999999997   78999999


Q ss_pred             ecCCcccCCccCcchh-HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCccc
Q 024553          167 ADPGVVKTNIMREVPS-FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  231 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~  231 (266)
                      |+||++.|++...... ...........+++++.+|+|+|+.+++++... ...+|..+..++|...
T Consensus       192 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~  258 (260)
T 2zat_A          192 LAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDASYITGETVVVGGGTAS  258 (260)
T ss_dssp             EEECSBCSSTTHHHHSSHHHHHHHHHHHTCSSCBCGGGGHHHHHHHTSGGGTTCCSCEEEESTTCCC
T ss_pred             EEECcccCccchhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCccCCEEEECCCccc
Confidence            9999999998653211 111111222345677889999999999544322 2347888888887654

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.95  E-value=8.3e-28  Score=199.01  Aligned_cols=194  Identities=21%  Similarity=0.247  Sum_probs=145.5

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC---CCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..   +..+.+.++|++++++|+.+++.+++.++
T Consensus        54 ~~~~~~~~~D~~~~~~~~~~~~~~~~------~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  127 (261)
T 3n74_A           54 GDAALAVAADISKEADVDAAVEAALS------KFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLI  127 (261)
T ss_dssp             CTTEEEEECCTTSHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CCceEEEEecCCCHHHHHHHHHHHHH------hcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            34689999999999999999999998      5589999999999863   34456889999999999999999999999


Q ss_pred             HHHhcCC---CCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeE
Q 024553           87 PLLKNSP---VPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVS  163 (266)
Q Consensus        87 ~~l~~~~---~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~  163 (266)
                      |+|++++   ..++||++||..+.                    .+.+....|+++|++++.++++++.++.   +.+|+
T Consensus       128 ~~~~~~~~~~~~~~iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~  184 (261)
T 3n74_A          128 PHFKENGAKGQECVILNVASTGAG--------------------RPRPNLAWYNATKGWVVSVTKALAIELA---PAKIR  184 (261)
T ss_dssp             HHHHHHHHTTCCEEEEEECCTTTT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEE
T ss_pred             HHHHhcCCCCCCeEEEEeCchhhc--------------------CCCCCccHHHHHHHHHHHHHHHHHHHhh---hcCcE
Confidence            9998642   25689999998873                    3566778899999999999999999997   78999


Q ss_pred             EEEecCCcccCCccCcchhH---HHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCcccc
Q 024553          164 VIAADPGVVKTNIMREVPSF---LSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       164 v~~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~~  232 (266)
                      |++|+||+++|++.......   ..........+++++.+|+|+|+.+++++.. ....+|..+..++|..+.
T Consensus       185 v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~~~  257 (261)
T 3n74_A          185 VVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQASMITGVALDVDGGRSIG  257 (261)
T ss_dssp             EEEEEEC-------------------------CTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTC-
T ss_pred             EEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHHHHHHHHcCCcccCcCCcEEEecCCcccC
Confidence            99999999999987754221   1111122334567788999999999954432 234689999988887664

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.95  E-value=1.1e-27  Score=198.36  Aligned_cols=188  Identities=16%  Similarity=0.168  Sum_probs=152.2

Q ss_pred             EEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC------CCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           13 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        13 ~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      +.++.+|+++.++++++++++.+      .++++|+||||||+..      +..+.+.++|++++++|+.|++++++.++
T Consensus        60 ~~~~~~D~~~~~~v~~~~~~~~~------~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  133 (261)
T 2wyu_A           60 ALLFRADVTQDEELDALFAGVKE------AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAE  133 (261)
T ss_dssp             CEEEECCTTCHHHHHHHHHHHHH------HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHT
T ss_pred             cEEEECCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            78999999999999999999988      5589999999999863      34567889999999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |.|++   .++||++||..+.                    .+.+....|+++|++++.++++++.++.   +.+|+||+
T Consensus       134 ~~~~~---~g~iv~isS~~~~--------------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~  187 (261)
T 2wyu_A          134 PLLRE---GGGIVTLTYYASE--------------------KVVPKYNVMAIAKAALEASVRYLAYELG---PKGVRVNA  187 (261)
T ss_dssp             TTEEE---EEEEEEEECGGGT--------------------SBCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEE
T ss_pred             HHhcc---CCEEEEEeccccc--------------------CCCCCchHHHHHHHHHHHHHHHHHHHHh---hhCcEEEE
Confidence            99975   5799999998763                    2455667899999999999999999997   78999999


Q ss_pred             ecCCcccCCccCcchhHHHH-HHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCcccc
Q 024553          167 ADPGVVKTNIMREVPSFLSL-MAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~~  232 (266)
                      |+||+|+|++.......... .......+++++.+|+++|+.+++++.. ....+|..+..++|..+.
T Consensus       188 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~  255 (261)
T 2wyu_A          188 ISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYHIM  255 (261)
T ss_dssp             EEECCCCCTGGGGCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             EeeCCCcCchhhhccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCCcccc
Confidence            99999999987653221111 1122233567788999999999966543 234579988888886543

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.95  E-value=1.3e-27  Score=198.64  Aligned_cols=188  Identities=14%  Similarity=0.116  Sum_probs=154.7

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++.+++.+++
T Consensus        75 ~~~~~~~~~Dl~~~~~~~~~~~~~~~------~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  148 (267)
T 4iiu_A           75 GGNGRLLSFDVANREQCREVLEHEIA------QHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIM  148 (267)
T ss_dssp             TCCEEEEECCTTCHHHHHHHHHHHHH------HHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCceEEEEecCCCHHHHHHHHHHHHH------HhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            35789999999999999999999988      5589999999999874  345778899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|.+....++||++||..+..                    +.++...|+++|+++..++++++.++.   +.+|+|++|
T Consensus       149 ~~~~~~~~g~iv~isS~~~~~--------------------~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~v~~v  205 (267)
T 4iiu_A          149 PMIGARQGGRIITLSSVSGVM--------------------GNRGQVNYSAAKAGIIGATKALAIELA---KRKITVNCI  205 (267)
T ss_dssp             HHHHHTSCEEEEEECCHHHHH--------------------CCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             HHHhcCCCcEEEEEcchHhcc--------------------CCCCCchhHHHHHHHHHHHHHHHHHHh---hcCeEEEEE
Confidence            886333278999999988743                    456678899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCC
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKG  228 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g  228 (266)
                      +||+|+|++........  .......+++++.+|+|+|+.+++++.. +...+|..+..++|
T Consensus       206 ~PG~v~t~~~~~~~~~~--~~~~~~~p~~~~~~~edva~~~~~L~s~~~~~itG~~i~vdGG  265 (267)
T 4iiu_A          206 APGLIDTGMIEMEESAL--KEAMSMIPMKRMGQAEEVAGLASYLMSDIAGYVTRQVISINGG  265 (267)
T ss_dssp             EECSBCSTTCCCCHHHH--HHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             EEeeecCCcccccHHHH--HHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCccCCEEEeCCC
Confidence            99999999987653322  1222334567788999999999965543 23568998887776

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.95  E-value=1.9e-27  Score=193.96  Aligned_cols=161  Identities=16%  Similarity=0.161  Sum_probs=133.4

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      ++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++.+++.++|.|
T Consensus        50 ~~~~~~~D~~~~~~v~~~~~~~~~------~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~  123 (235)
T 3l6e_A           50 AVIGIVADLAHHEDVDVAFAAAVE------WGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLI  123 (235)
T ss_dssp             GEEEEECCTTSHHHHHHHHHHHHH------HHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CceEEECCCCCHHHHHHHHHHHHH------hcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            589999999999999999999998      5589999999999863  45677899999999999999999999999999


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      ++++  ++||++||..+.                    .+.+....|++||+++..++++++.++.   +.+|+||+|+|
T Consensus       124 ~~~~--~~iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~v~~v~P  178 (235)
T 3l6e_A          124 GERG--GVLANVLSSAAQ--------------------VGKANESLYCASKWGMRGFLESLRAELK---DSPLRLVNLYP  178 (235)
T ss_dssp             TTTC--EEEEEECCEECC--------------------SSCSSHHHHHHHHHHHHHHHHHHHHHTT---TSSEEEEEEEE
T ss_pred             HHcC--CEEEEEeCHHhc--------------------CCCCCCcHHHHHHHHHHHHHHHHHHHhh---ccCCEEEEEeC
Confidence            8765  599999998873                    3567778999999999999999999997   78999999999


Q ss_pred             CcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Q 024553          170 GVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAAL  213 (266)
Q Consensus       170 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~  213 (266)
                      |+|+|++.......          +..++.+|+++|+.+++++.
T Consensus       179 G~v~T~~~~~~~~~----------~~~~~~~pedvA~~v~~l~~  212 (235)
T 3l6e_A          179 SGIRSEFWDNTDHV----------DPSGFMTPEDAAAYMLDALE  212 (235)
T ss_dssp             EEECCCC---------------------CBCHHHHHHHHHHHTC
T ss_pred             CCccCcchhccCCC----------CCcCCCCHHHHHHHHHHHHh
Confidence            99999987654221          12256799999999996554

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.95  E-value=1.3e-27  Score=197.17  Aligned_cols=191  Identities=18%  Similarity=0.177  Sum_probs=152.6

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++.+++.++|
T Consensus        50 ~~~~~~~~~D~~~~~~v~~~~~~~~~------~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~  123 (255)
T 2q2v_A           50 GVKAVHHPADLSDVAQIEALFALAER------EFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALP  123 (255)
T ss_dssp             SCCEEEECCCTTSHHHHHHHHHHHHH------HHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCceEEEeCCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            34688999999999999999999988      5589999999999863  345678899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++++ .++||++||..+.                    .+.+....|+.+|++++.++++++.++.   +.+|+||+|
T Consensus       124 ~~~~~~-~g~iv~isS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v  179 (255)
T 2q2v_A          124 GMRARN-WGRIINIASVHGL--------------------VGSTGKAAYVAAKHGVVGLTKVVGLETA---TSNVTCNAI  179 (255)
T ss_dssp             HHHHTT-CEEEEEECCGGGT--------------------SCCTTBHHHHHHHHHHHHHHHHHHHHTT---TSSEEEEEE
T ss_pred             HHHHcC-CcEEEEEcCchhc--------------------cCCCCchhHHHHHHHHHHHHHHHHHHhc---ccCcEEEEE
Confidence            998876 7899999998873                    2456678899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhH-HHH--------HHH-HHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCcc
Q 024553          168 DPGVVKTNIMREVPSF-LSL--------MAF-TVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  230 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~-~~~--------~~~-~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~  230 (266)
                      +||++.|++....... ...        ... ....+++++.+|+|+|+.+++++... ...+|..+..++|..
T Consensus       180 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~~  253 (255)
T 2q2v_A          180 CPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDGGWL  253 (255)
T ss_dssp             EESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             eeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECCCcc
Confidence            9999999986542210 000        000 11124567789999999999654322 245788888777753

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.95  E-value=1.8e-27  Score=196.24  Aligned_cols=195  Identities=26%  Similarity=0.283  Sum_probs=156.6

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.+|+++.++++++++++.+.+......+++|+||||||+..  +..+.+.++|++++++|+.|++.+++.++|
T Consensus        56 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  135 (255)
T 3icc_A           56 GGSAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALS  135 (255)
T ss_dssp             TCEEEEEECCTTSHHHHHHHHHHHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTT
T ss_pred             CCceEEEecCcCCHHHHHHHHHHHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHH
Confidence            457899999999999999999999875432112246999999999863  345678899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++   .++||++||..+.                    .+.+....|+++|++++.++++++.++.   +.+|+|++|
T Consensus       136 ~~~~---~~~iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~v~~v  189 (255)
T 3icc_A          136 RLRD---NSRIINISSAATR--------------------ISLPDFIAYSMTKGAINTMTFTLAKQLG---ARGITVNAI  189 (255)
T ss_dssp             TEEE---EEEEEEECCGGGT--------------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEE
T ss_pred             hhCC---CCEEEEeCChhhc--------------------cCCCCcchhHHhHHHHHHHHHHHHHHHH---hcCeEEEEE
Confidence            9955   5799999998873                    3567778999999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHH-HHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCcc
Q 024553          168 DPGVVKTNIMREVPSFLS-LMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  230 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~  230 (266)
                      +||+++|++......... ........+++++.+|+|+|+.+++++.. +...+|..+..++|..
T Consensus       190 ~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~~  254 (255)
T 3icc_A          190 LPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGGSC  254 (255)
T ss_dssp             EECCBCCSSSTTTTTSHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSTT
T ss_pred             EEeeecccchhhhcccHHHHHhhhccCCcCCCCCHHHHHHHHHHHhCcccCCccCCEEEecCCee
Confidence            999999999876543322 12222334567788999999999965532 2456899998888753

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.95  E-value=6.6e-28  Score=201.09  Aligned_cols=175  Identities=18%  Similarity=0.249  Sum_probs=142.6

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++.+++.++|
T Consensus        61 ~~~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  134 (274)
T 3e03_A           61 GGQGLALKCDIREEDQVRAAVAATVD------TFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLP  134 (274)
T ss_dssp             TSEEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCeEEEEeCCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHH
Confidence            45789999999999999999999998      5689999999999873  456778899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCC--CChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEE
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKC--YPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVI  165 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~  165 (266)
                      +|++++ .++||++||..+..                    +  +++...|++||+++..++++++.++.   +.+|+||
T Consensus       135 ~m~~~~-~g~iv~isS~~~~~--------------------~~~~~~~~~Y~asKaal~~l~~~la~e~~---~~gI~vn  190 (274)
T 3e03_A          135 HLLQAP-NPHILTLAPPPSLN--------------------PAWWGAHTGYTLAKMGMSLVTLGLAAEFG---PQGVAIN  190 (274)
T ss_dssp             HHTTSS-SCEEEECCCCCCCC--------------------HHHHHHCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEE
T ss_pred             HHHhcC-CceEEEECChHhcC--------------------CCCCCCCchHHHHHHHHHHHHHHHHHHhh---hcCEEEE
Confidence            999877 79999999988632                    2  45567899999999999999999998   7899999


Q ss_pred             EecCC-cccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceee
Q 024553          166 AADPG-VVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFF  224 (266)
Q Consensus       166 ~v~PG-~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~  224 (266)
                      +|+|| +++|++.......          +..++.+|+++|+.+++++... ...+|+++.
T Consensus       191 ~v~PG~~v~T~~~~~~~~~----------~~~~~~~pedvA~~v~~l~s~~~~~itG~~i~  241 (274)
T 3e03_A          191 ALWPRTVIATDAINMLPGV----------DAAACRRPEIMADAAHAVLTREAAGFHGQFLI  241 (274)
T ss_dssp             EEECSBCBCC-------CC----------CGGGSBCTHHHHHHHHHHHTSCCTTCCSCEEE
T ss_pred             EEECCcccccchhhhcccc----------cccccCCHHHHHHHHHHHhCccccccCCeEEE
Confidence            99999 6899987432211          1224669999999999655432 355799885

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.95  E-value=5e-28  Score=203.02  Aligned_cols=202  Identities=15%  Similarity=0.205  Sum_probs=153.8

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+.....+.+.++|++++++|+.|++++++.++|+|
T Consensus        70 ~~~~~~~~~D~~~~~~v~~~~~~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~  143 (287)
T 3pxx_A           70 GRKAYTAEVDVRDRAAVSRELANAVA------EFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYL  143 (287)
T ss_dssp             TSCEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGC
T ss_pred             CCceEEEEccCCCHHHHHHHHHHHHH------HcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHh
Confidence            45799999999999999999999998      568999999999997544557889999999999999999999999999


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      .+   .++||++||..+.........         .+....++...|+++|++++.++++++.++.   +.+|+||+|+|
T Consensus       144 ~~---~g~iv~isS~~~~~~~~~~~~---------~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~vn~v~P  208 (287)
T 3pxx_A          144 TS---GASIITTGSVAGLIAAAQPPG---------AGGPQGPGGAGYSYAKQLVDSYTLQLAAQLA---PQSIRANVIHP  208 (287)
T ss_dssp             CT---TCEEEEECCHHHHHHHHCCC--------------CHHHHHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEE
T ss_pred             hc---CcEEEEeccchhccccccccc---------ccccCCCccchHHHHHHHHHHHHHHHHHHHh---hcCcEEEEEec
Confidence            43   689999999887543211110         1122335678899999999999999999997   78999999999


Q ss_pred             CcccCCccCcchhHHHH----------HHHH---HHHH-hhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCcccc
Q 024553          170 GVVKTNIMREVPSFLSL----------MAFT---VLKL-LGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       170 G~v~T~~~~~~~~~~~~----------~~~~---~~~~-~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~~  232 (266)
                      |+|+|++....+.....          ....   .... -+++.+|+|+|+.+++++.. +...+|..+..++|..+.
T Consensus       209 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~~  286 (287)
T 3pxx_A          209 TNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAMLK  286 (287)
T ss_dssp             SSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHGGGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             CccccccccccchhhhhccccccchhHHHHhhhhhhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECchhhhc
Confidence            99999998653221110          0000   0000 05678999999999954432 235689999888887653

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.95  E-value=5.2e-28  Score=201.43  Aligned_cols=189  Identities=17%  Similarity=0.206  Sum_probs=151.3

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++.+++.++|
T Consensus        78 ~~~~~~~~~D~~~~~~v~~~~~~~~~------~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  151 (271)
T 4iin_A           78 GYKAAVIKFDAASESDFIEAIQTIVQ------SDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALK  151 (271)
T ss_dssp             TCCEEEEECCTTCHHHHHHHHHHHHH------HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCceEEEECCCCCHHHHHHHHHHHHH------hcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHH
Confidence            45789999999999999999999988      5589999999999874  345678899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++++ .++||++||..+..                    +.++...|+++|++++.++++++.++.   .++|+|++|
T Consensus       152 ~~~~~~-~g~iv~isS~~~~~--------------------~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v  207 (271)
T 4iin_A          152 VMSKSR-FGSVVNVASIIGER--------------------GNMGQTNYSASKGGMIAMSKSFAYEGA---LRNIRFNSV  207 (271)
T ss_dssp             HHHHHT-CEEEEEECCHHHHH--------------------CCTTCHHHHHHHHHHHHHHHHHHHHHH---TTTEEEEEE
T ss_pred             HHhhcC-CCEEEEEechhhcC--------------------CCCCchHhHHHHHHHHHHHHHHHHHHH---HhCcEEEEE
Confidence            998876 78999999988743                    556678899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      +||+|+|++......... .......+++++.+|+++|+.+++++... ...+|..+..++|-
T Consensus       208 ~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~p~dvA~~i~~l~s~~~~~itG~~i~vdGG~  269 (271)
T 4iin_A          208 TPGFIETDMNANLKDELK-ADYVKNIPLNRLGSAKEVAEAVAFLLSDHSSYITGETLKVNGGL  269 (271)
T ss_dssp             EECSBCCC-------------CGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             EeCcccCCchhhhcHHHH-HHHHhcCCcCCCcCHHHHHHHHHHHhCCCcCCCcCCEEEeCCCe
Confidence            999999999876543221 11122235567889999999999655432 35689998887774

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.95  E-value=2.2e-27  Score=198.26  Aligned_cols=190  Identities=21%  Similarity=0.210  Sum_probs=153.4

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++.+++.++|
T Consensus        70 ~~~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  143 (277)
T 2rhc_B           70 GVEADGRTCDVRSVPEIEALVAAVVE------RYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLK  143 (277)
T ss_dssp             TCCEEEEECCTTCHHHHHHHHHHHHH------HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHT
T ss_pred             CCceEEEECCCCCHHHHHHHHHHHHH------HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhC
Confidence            34689999999999999999999988      5689999999999863  445678889999999999999999999999


Q ss_pred             H--HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEE
Q 024553           88 L--LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVI  165 (266)
Q Consensus        88 ~--l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~  165 (266)
                      .  |++++ .++||++||..+.                    .+.+....|+++|++++.++++++.++.   +.+|+||
T Consensus       144 ~~~m~~~~-~g~iv~isS~~~~--------------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~  199 (277)
T 2rhc_B          144 AGGMLERG-TGRIVNIASTGGK--------------------QGVVHAAPYSASKHGVVGFTKALGLELA---RTGITVN  199 (277)
T ss_dssp             TTCHHHHT-EEEEEEECCGGGT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHT---TTEEEEE
T ss_pred             hhhHhhcC-CeEEEEECccccc--------------------cCCCCCccHHHHHHHHHHHHHHHHHHHH---HhCcEEE
Confidence            9  87765 6899999998863                    3456678899999999999999999997   7899999


Q ss_pred             EecCCcccCCccCcchh----------HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          166 AADPGVVKTNIMREVPS----------FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       166 ~v~PG~v~T~~~~~~~~----------~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      +|+||++.|++......          ...........+++++.+|+|+|+.+++++... ...+|..+..++|.
T Consensus       200 ~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~  274 (277)
T 2rhc_B          200 AVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL  274 (277)
T ss_dssp             EEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             EEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence            99999999998654211          011111122235677889999999999655432 24689988877774

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.95  E-value=1.2e-27  Score=199.23  Aligned_cols=192  Identities=18%  Similarity=0.189  Sum_probs=145.9

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC---CCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..   +..+.+.++|++++++|+.|++.+++.++
T Consensus        75 ~~~~~~~~~Dl~~~~~v~~~~~~~~~------~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  148 (272)
T 4e3z_A           75 GGEAVAIPGDVGNAADIAAMFSAVDR------QFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAV  148 (272)
T ss_dssp             TCEEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CCcEEEEEcCCCCHHHHHHHHHHHHH------hCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence            45799999999999999999999998      5589999999999863   34567889999999999999999999999


Q ss_pred             HHHhcC--CCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEE
Q 024553           87 PLLKNS--PVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSV  164 (266)
Q Consensus        87 ~~l~~~--~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v  164 (266)
                      |.|++.  +..++||++||..+...                   ..+....|+++|++++.++++++.++.   +.+|+|
T Consensus       149 ~~~~~~~~~~~g~iv~isS~~~~~~-------------------~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~v  206 (272)
T 4e3z_A          149 RRMSRLYSGQGGAIVNVSSMAAILG-------------------SATQYVDYAASKAAIDTFTIGLAREVA---AEGIRV  206 (272)
T ss_dssp             HHHCGGGTCCCEEEEEECCTHHHHC-------------------CTTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEE
T ss_pred             HHHHHhccCCCCEEEEEcchHhccC-------------------CCCCcchhHHHHHHHHHHHHHHHHHHH---HcCcEE
Confidence            999763  22689999999887431                   222456799999999999999999997   789999


Q ss_pred             EEecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          165 IAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       165 ~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      ++|+||+|+|++.................+++++.+|+|+|+.+++++... ...+|..+..++|+
T Consensus       207 ~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~s~~~~~~tG~~i~vdgG~  272 (272)
T 4e3z_A          207 NAVRPGIIETDLHASGGLPDRAREMAPSVPMQRAGMPEEVADAILYLLSPSASYVTGSILNVSGGR  272 (272)
T ss_dssp             EEEEECSBC------------------CCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             EEEecCCCcCCcccccCChHHHHHHhhcCCcCCCcCHHHHHHHHHHHhCCccccccCCEEeecCCC
Confidence            999999999998765222111111222235567789999999999765422 35679998877764

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.95  E-value=1.9e-27  Score=196.45  Aligned_cols=189  Identities=23%  Similarity=0.255  Sum_probs=151.2

Q ss_pred             EEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           14 EAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        14 ~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      .++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++.+++.++|.|++
T Consensus        52 ~~~~~D~~~~~~~~~~~~~~~~------~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~  125 (256)
T 2d1y_A           52 AFFQVDLEDERERVRFVEEAAY------ALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRK  125 (256)
T ss_dssp             EEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred             CEEEeeCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence            7899999999999999999988      5589999999999863  4556788899999999999999999999999988


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCc
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV  171 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~  171 (266)
                      ++ .++||++||..+.                    .+.+....|+++|++++.++++++.++.   +.+|++|+|+||+
T Consensus       126 ~~-~g~iv~isS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~  181 (256)
T 2d1y_A          126 VG-GGAIVNVASVQGL--------------------FAEQENAAYNASKGGLVNLTRSLALDLA---PLRIRVNAVAPGA  181 (256)
T ss_dssp             TT-CEEEEEECCGGGT--------------------SBCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECS
T ss_pred             cC-CcEEEEEcccccc--------------------CCCCCChhHHHHHHHHHHHHHHHHHHHh---hcCeEEEEEeeCC
Confidence            76 7899999998863                    2456678899999999999999999997   7899999999999


Q ss_pred             ccCCccCcc----h-hHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCcccc
Q 024553          172 VKTNIMREV----P-SFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  232 (266)
Q Consensus       172 v~T~~~~~~----~-~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~~  232 (266)
                      ++|++....    . ............+++++.+|+|+|+.+++++... ...+|..+..++|....
T Consensus       182 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~v~gG~~~~  248 (256)
T 2d1y_A          182 IATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITGAILPVDGGMTAS  248 (256)
T ss_dssp             BCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             ccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCCEEEECCCcccc
Confidence            999875431    0 0000011111224567889999999999655432 24579888888886553

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.95  E-value=3.7e-27  Score=198.73  Aligned_cols=191  Identities=20%  Similarity=0.198  Sum_probs=153.5

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--C--CCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--T--SSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      ++.++.||+++.++++++++++.+      .++++|+||||||+..  +  ..+.+.++|++++++|+.|++.+++.++|
T Consensus        79 ~~~~~~~Dv~d~~~v~~~~~~~~~------~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  152 (297)
T 1xhl_A           79 KINAVVADVTEASGQDDIINTTLA------KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKE  152 (297)
T ss_dssp             GEEEEECCTTSHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             eEEEEecCCCCHHHHHHHHHHHHH------hcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHH
Confidence            789999999999999999999988      5589999999999863  3  45678899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCC-ChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCY-PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      .|++++  ++||++||..+..                    +. ++...|+++|++++.++++++.++.   +.+|+||+
T Consensus       153 ~~~~~~--g~IV~isS~~~~~--------------------~~~~~~~~Y~asKaa~~~l~~~la~el~---~~gI~v~~  207 (297)
T 1xhl_A          153 HLIKTK--GEIVNVSSIVAGP--------------------QAHSGYPYYACAKAALDQYTRCTAIDLI---QHGVRVNS  207 (297)
T ss_dssp             HHHHTT--CEEEEECCGGGSS--------------------SCCTTSHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEE
T ss_pred             HHHhcC--CEEEEEcCchhcc--------------------CCCCCcchHHHHHHHHHHHHHHHHHHhc---ccCeEEEE
Confidence            998754  8999999988632                    33 5678899999999999999999997   78999999


Q ss_pred             ecCCcccCCccCcc--hhHHH-----HH-HHHHHHHhhcCCCHHHHHHHHHHHhcC--CCCcccceeecCCCccccC
Q 024553          167 ADPGVVKTNIMREV--PSFLS-----LM-AFTVLKLLGLLQSPEKGINSVLDAALA--PPETSGVYFFGGKGRTVNS  233 (266)
Q Consensus       167 v~PG~v~T~~~~~~--~~~~~-----~~-~~~~~~~~~~~~~p~~~a~~~~~~~~~--~~~~~G~~~~~~~g~~~~~  233 (266)
                      |+||+|+|++....  .....     .. ......+++++.+|+++|+.+++++..  ....+|..+..++|..+..
T Consensus       208 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~  284 (297)
T 1xhl_A          208 VSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVM  284 (297)
T ss_dssp             EEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCC
T ss_pred             EeeCCCcCccccccccccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCccccc
Confidence            99999999986543  11100     00 000112456788999999999965542  2356899998888876543

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.95  E-value=6.5e-27  Score=199.86  Aligned_cols=189  Identities=16%  Similarity=0.125  Sum_probs=151.9

Q ss_pred             CccEEEEEecCCCHH-----------------HHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCC-------
Q 024553           10 DARLEAFQVDLSSFQ-----------------SVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLT-------   63 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~-----------------~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~-------   63 (266)
                      +.++.++.||+++.+                 +++++++++.+      .++++|+||||||+..  +..+.+       
T Consensus        96 ~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~------~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~  169 (328)
T 2qhx_A           96 PNSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYT------HWGRCDVLVNNASSFYPTPLLRNDEDGHEPC  169 (328)
T ss_dssp             TTCEEEEECCCSSSCBCC-------CCBCHHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCSCC---------
T ss_pred             CCeEEEEEeeCCCchhccccccccccccccHHHHHHHHHHHHH------hcCCCCEEEECCCCCCCCChhhcCccccccc
Confidence            357899999999999                 99999999988      5589999999999863  445566       


Q ss_pred             -------CcccchhhhhhhhhHHHHHHhhHHHHhcCCC-----CCeEEEEcCCcccccccccCCccccccCcccCCCCCC
Q 024553           64 -------PEGYDQMMSTNYIGAFFLTKLLLPLLKNSPV-----PSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYP  131 (266)
Q Consensus        64 -------~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-----~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (266)
                             .++|++++++|+.+++.+++.++|.|++++.     .++||++||..+.                    .+.+
T Consensus       170 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~IV~isS~~~~--------------------~~~~  229 (328)
T 2qhx_A          170 VGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTN--------------------QPLL  229 (328)
T ss_dssp             ----CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSCGGGSCSCEEEEEECCTTTT--------------------SCCT
T ss_pred             cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCCcEEEEECchhhc--------------------cCCC
Confidence                   7889999999999999999999999986531     4799999998873                    3556


Q ss_pred             hhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcccCCccCcchhHHHHHHHHHHHHhh-cCCCHHHHHHHHHH
Q 024553          132 CARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG-LLQSPEKGINSVLD  210 (266)
Q Consensus       132 ~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~a~~~~~  210 (266)
                      +...|+++|++++.++++++.++.   +.+|+||+|+||+|+|++ ...+..  ........+++ ++.+|+++|+.+++
T Consensus       230 ~~~~Y~asKaal~~l~~~la~el~---~~gIrvn~v~PG~v~T~~-~~~~~~--~~~~~~~~p~~~r~~~pedvA~~v~~  303 (328)
T 2qhx_A          230 GYTIYTMAKGALEGLTRSAALELA---PLQIRVNGVGPGLSVLVD-DMPPAV--WEGHRSKVPLYQRDSSAAEVSDVVIF  303 (328)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEESSBSCCC-CSCHHH--HHHHHTTCTTTTSCBCHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHh---hcCcEEEEEecCcccCCc-cccHHH--HHHHHhhCCCCCCCCCHHHHHHHHHH
Confidence            778899999999999999999997   789999999999999999 543211  11111223556 78899999999997


Q ss_pred             HhcC-CCCcccceeecCCCcc
Q 024553          211 AALA-PPETSGVYFFGGKGRT  230 (266)
Q Consensus       211 ~~~~-~~~~~G~~~~~~~g~~  230 (266)
                      ++.. ....+|.++..++|..
T Consensus       304 l~s~~~~~itG~~i~vdGG~~  324 (328)
T 2qhx_A          304 LCSSKAKYITGTCVKVDGGYS  324 (328)
T ss_dssp             HHSGGGTTCCSCEEEESTTGG
T ss_pred             HhCccccCccCcEEEECCCcc
Confidence            6542 2356899998887754

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.95  E-value=2.5e-27  Score=203.54  Aligned_cols=180  Identities=17%  Similarity=0.232  Sum_probs=149.0

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++++++.++|
T Consensus       100 g~~~~~~~~Dv~d~~~v~~~~~~~~~------~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp  173 (346)
T 3kvo_A          100 GGKALPCIVDVRDEQQISAAVEKAIK------KFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIP  173 (346)
T ss_dssp             TCEEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCeEEEEEccCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            45799999999999999999999998      5589999999999863  556788899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++++ .++||++||..+...                  ...+....|+++|+++..++++++.++.    .+|+||+|
T Consensus       174 ~m~~~~-~g~IV~iSS~~~~~~------------------~~~~~~~~Y~aSKaal~~l~~~la~e~~----~gIrvn~v  230 (346)
T 3kvo_A          174 YLKKSK-VAHILNISPPLNLNP------------------VWFKQHCAYTIAKYGMSMYVLGMAEEFK----GEIAVNAL  230 (346)
T ss_dssp             HHTTCS-SCEEEEECCCCCCCG------------------GGTSSSHHHHHHHHHHHHHHHHHHHHTT----TTCEEEEE
T ss_pred             HHHHCC-CCEEEEECCHHHcCC------------------CCCCCchHHHHHHHHHHHHHHHHHHHhc----CCcEEEEE
Confidence            999877 799999999886321                  1255678899999999999999999994    78999999


Q ss_pred             cCCc-ccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCC
Q 024553          168 DPGV-VKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKG  228 (266)
Q Consensus       168 ~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g  228 (266)
                      +||+ ++|++......         ..+.+++.+|+++|+.+++++..+...+|.++. ++|
T Consensus       231 ~PG~~i~T~~~~~~~~---------~~~~~r~~~pedvA~~v~~L~s~~~~itG~~iv-dgg  282 (346)
T 3kvo_A          231 WPKTAIHTAAMDMLGG---------PGIESQCRKVDIIADAAYSIFQKPKSFTGNFVI-DEN  282 (346)
T ss_dssp             ECSBCBCCHHHHHHCC-----------CGGGCBCTHHHHHHHHHHHTSCTTCCSCEEE-HHH
T ss_pred             eCCCccccHHHHhhcc---------ccccccCCCHHHHHHHHHHHHhcCCCCCceEEE-CCc
Confidence            9995 88876542211         123456789999999999777664456899884 444

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.95  E-value=8.5e-28  Score=205.50  Aligned_cols=189  Identities=14%  Similarity=0.116  Sum_probs=153.4

Q ss_pred             cEEEEEecCCCH--H------------------HHHHHHHHHHHhhccCCCCCCcceeeEcCCCC----CCCCcCCCccc
Q 024553           12 RLEAFQVDLSSF--Q------------------SVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL----ATSSRLTPEGY   67 (266)
Q Consensus        12 ~~~~i~~Dls~~--~------------------~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~----~~~~~~~~~~~   67 (266)
                      .+.++.||+++.  +                  +++++++++.+      .++++|+||||||+.    .+..+.+.++|
T Consensus        66 ~~~~~~~Dv~~~~~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~------~~g~iDilVnnAGi~~~~~~~~~~~~~~~~  139 (329)
T 3lt0_A           66 ILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQ------KYGKINMLVHSLANAKEVQKDLLNTSRKGY  139 (329)
T ss_dssp             EEEEEECCTTCSSGGGCCHHHHTSHHHHTCCSCSHHHHHHHHHH------HHCCEEEEEECCCCCTTTTSCGGGCCHHHH
T ss_pred             ccccccccccccchhhhhhhhcccccccccCHHHHHHHHHHHHH------hcCCCcEEEECCcccccCCCCcccCCHHHH
Confidence            478999999988  8                  99999999998      558999999999974    35667889999


Q ss_pred             chhhhhhhhhHHHHHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhh-cchHhHHHHHHH
Q 024553           68 DQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCAR-IYEYSKLCLLIF  146 (266)
Q Consensus        68 ~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~~~~~~  146 (266)
                      +++|++|+.|++++++.++|+|++   .|+||++||..+.                    .+.+... .|++||+++..|
T Consensus       140 ~~~~~vN~~g~~~l~~~~~p~m~~---~g~Iv~isS~~~~--------------------~~~~~~~~~Y~asKaal~~~  196 (329)
T 3lt0_A          140 LDALSKSSYSLISLCKYFVNIMKP---QSSIISLTYHASQ--------------------KVVPGYGGGMSSAKAALESD  196 (329)
T ss_dssp             HHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGT--------------------SCCTTCTTTHHHHHHHHHHH
T ss_pred             HHHHHHHhHHHHHHHHHHHHHHhh---CCeEEEEeCcccc--------------------CCCCcchHHHHHHHHHHHHH
Confidence            999999999999999999999987   4799999999873                    3555664 899999999999


Q ss_pred             HHHHHHhhCCCCC-CCeEEEEecCCcccCCccCcchhHH-----------------------------------------
Q 024553          147 SYELHRNLGLDKS-RHVSVIAADPGVVKTNIMREVPSFL-----------------------------------------  184 (266)
Q Consensus       147 ~~~la~~~~~~~~-~~i~v~~v~PG~v~T~~~~~~~~~~-----------------------------------------  184 (266)
                      +++|+.++.   + .+|+||+|+||+|+|++........                                         
T Consensus       197 ~~~la~el~---~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (329)
T 3lt0_A          197 TRVLAYHLG---RNYNIRINTISAGPLKSRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTF  273 (329)
T ss_dssp             HHHHHHHHH---HHHCCEEEEEEECCCCCHHHHTCC------------------------------------------CH
T ss_pred             HHHHHHHhC---CccCeEEEEEecceeechhHhhhhhhcccccccccccccccccccchhhcccccchhhhhhhhcccch
Confidence            999999996   6 6999999999999999876542100                                         


Q ss_pred             ---HHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCcccc
Q 024553          185 ---SLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       185 ---~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~~  232 (266)
                         .........+++++.+|+++|+.+++++.. +...+|..+..++|..+.
T Consensus       274 ~~~~~~~~~~~~p~~r~~~peevA~~v~fL~s~~a~~itG~~i~vdGG~~~~  325 (329)
T 3lt0_A          274 IDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQTIYVDNGLNIM  325 (329)
T ss_dssp             HHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             hHHHHHHHhhcCcccCcCCHHHHHHHHHHHhCchhccccCcEEEEcCCeeEE
Confidence               011122334667888999999999955431 235689999888887653

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.94  E-value=1.1e-26  Score=191.00  Aligned_cols=184  Identities=21%  Similarity=0.246  Sum_probs=141.3

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC---CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      .++.++.||+++.++++++++++.+      .++++|+||||||+.   .+..+.+.++|++++++|+.|++.+++.++|
T Consensus        46 ~~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  119 (248)
T 3asu_A           46 DNLYIAQLDVRNRAAIEEMLASLPA------EWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLP  119 (248)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHTSCT------TTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CceEEEEcCCCCHHHHHHHHHHHHH------hCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            3688999999999999999999987      678999999999986   2456778899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++++ .++||++||..+.                    .+.++...|+.+|++++.++++++.++.   +.+|+||+|
T Consensus       120 ~m~~~~-~g~iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~v~~v  175 (248)
T 3asu_A          120 GMVERN-HGHIINIGSTAGS--------------------WPYAGGNVYGATKAFVRQFSLNLRTDLH---GTAVRVTDI  175 (248)
T ss_dssp             HHHHHT-CCEEEEECCGGGT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHTT---TSCCEEEEE
T ss_pred             HHHhcC-CceEEEEccchhc--------------------cCCCCCchHHHHHHHHHHHHHHHHHHhh---hcCcEEEEE
Confidence            998765 7899999998873                    3556678899999999999999999997   789999999


Q ss_pred             cCCccc-CCccCcc-hhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecC
Q 024553          168 DPGVVK-TNIMREV-PSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGG  226 (266)
Q Consensus       168 ~PG~v~-T~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~  226 (266)
                      +||+|+ |++.... ......... . .....+.+|+++|+.+++++..+...+|.-+...
T Consensus       176 ~PG~v~gT~~~~~~~~~~~~~~~~-~-~~~~~~~~p~dvA~~v~~l~s~~~~~~g~~i~v~  234 (248)
T 3asu_A          176 EPGLVGGTEFSNVRFKGDDGKAEK-T-YQNTVALTPEDVSEAVWWVSTLPAHVNINTLEMM  234 (248)
T ss_dssp             EECSBCC------------------------CCBCHHHHHHHHHHHHHSCTTCCCCEEEEC
T ss_pred             eccccccCcchhhcccCchHHHHH-H-HhccCCCCHHHHHHHHHHHhcCCccceeeEEEEc
Confidence            999999 9986432 111000000 0 0111345999999999977766555666665533

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.94  E-value=1.1e-26  Score=190.78  Aligned_cols=172  Identities=22%  Similarity=0.344  Sum_probs=141.5

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+.  .+..+.+.++|++++++|+.|++.+++.++|
T Consensus        55 ~~~~~~~~~Dv~~~~~~~~~~~~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  128 (247)
T 2jah_A           55 GAKVHVLELDVADRQGVDAAVASTVE------ALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALP  128 (247)
T ss_dssp             TCCEEEEECCTTCHHHHHHHHHHHHH------HHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            34789999999999999999999988      558999999999986  3456778899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++++  |+||++||..+.                    .+.++...|+++|+++..++++++.++.   +.+|+||+|
T Consensus       129 ~~~~~~--g~iv~isS~~~~--------------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v  183 (247)
T 2jah_A          129 HLLRSK--GTVVQMSSIAGR--------------------VNVRNAAVYQATKFGVNAFSETLRQEVT---ERGVRVVVI  183 (247)
T ss_dssp             HHHHHT--CEEEEECCGGGT--------------------CCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEE
T ss_pred             HHHHCC--CEEEEEccHHhc--------------------CCCCCCcHHHHHHHHHHHHHHHHHHHhc---ccCcEEEEE
Confidence            998654  899999998873                    3556678899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcC--CCHHHHHHHHHHHhcC
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLL--QSPEKGINSVLDAALA  214 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~a~~~~~~~~~  214 (266)
                      +||+++|++........ ........+ +++  .+|+++|+.+++++..
T Consensus       184 ~PG~v~T~~~~~~~~~~-~~~~~~~~~-~~~~~~~pedvA~~v~~l~s~  230 (247)
T 2jah_A          184 EPGTTDTELRGHITHTA-TKEMYEQRI-SQIRKLQAQDIAEAVRYAVTA  230 (247)
T ss_dssp             EECSBSSSGGGGCCCHH-HHHHHHHHT-TTSCCBCHHHHHHHHHHHHHS
T ss_pred             ECCCCCCcchhcccchh-hHHHHHhcc-cccCCCCHHHHHHHHHHHhCC
Confidence            99999999876532211 111111112 445  7999999999976644

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.94  E-value=3.4e-27  Score=195.64  Aligned_cols=187  Identities=19%  Similarity=0.192  Sum_probs=150.5

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++.+++.++|.
T Consensus        52 ~~~~~~~~D~~~~~~v~~~~~~~~~------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  125 (263)
T 2a4k_A           52 AEAIAVVADVSDPKAVEAVFAEALE------EFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEV  125 (263)
T ss_dssp             SSEEEEECCTTSHHHHHHHHHHHHH------HHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEEcCCCCHHHHHHHHHHHHH------HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            4688999999999999999999988      5589999999999863  4567788999999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      | ++  .++||++||..+.                     +.+....|+.+|++++.++++++.++.   +.+|+||+|+
T Consensus       126 ~-~~--~g~iv~isS~~~~---------------------~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~  178 (263)
T 2a4k_A          126 L-EE--GGSLVLTGSVAGL---------------------GAFGLAHYAAGKLGVVGLARTLALELA---RKGVRVNVLL  178 (263)
T ss_dssp             C-CT--TCEEEEECCCTTC---------------------CHHHHHHHHHCSSHHHHHHHHHHHHHT---TTTCEEEEEE
T ss_pred             H-hc--CCEEEEEecchhc---------------------CCCCcHHHHHHHHHHHHHHHHHHHHhh---hhCcEEEEEE
Confidence            9 43  6899999998862                     345568899999999999999999997   7899999999


Q ss_pred             CCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCccc
Q 024553          169 PGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  231 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~  231 (266)
                      ||+|+|++.....+.. ........+++++.+|+++|+.+++++... ...+|..+..++|...
T Consensus       179 PG~v~t~~~~~~~~~~-~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdgG~~~  241 (263)
T 2a4k_A          179 PGLIQTPMTAGLPPWA-WEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALYVDGGRSI  241 (263)
T ss_dssp             ECSBCCGGGTTSCHHH-HHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             eCcCcCchhhhcCHHH-HHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCccc
Confidence            9999999876643221 111112235567889999999999665432 2467999888888654

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.94  E-value=2.5e-27  Score=193.70  Aligned_cols=188  Identities=15%  Similarity=0.109  Sum_probs=149.3

Q ss_pred             EEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           13 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        13 ~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      +.++.+|+++ ++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.+++.+++.++|.|+
T Consensus        45 ~~~~~~D~~~-~~~~~~~~~~~~------~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~  117 (239)
T 2ekp_A           45 AVPLPTDLEK-DDPKGLVKRALE------ALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMA  117 (239)
T ss_dssp             CEEEECCTTT-SCHHHHHHHHHH------HHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             cEEEecCCch-HHHHHHHHHHHH------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence            6789999999 999999999988      4578999999999863  456778899999999999999999999999998


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                      +++ .++||++||..+...                  ...++...|+.+|++++.++++++.++.   +.+|++++|+||
T Consensus       118 ~~~-~g~iv~isS~~~~~~------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg  175 (239)
T 2ekp_A          118 EAG-WGRVLFIGSVTTFTA------------------GGPVPIPAYTTAKTALLGLTRALAKEWA---RLGIRVNLLCPG  175 (239)
T ss_dssp             HHT-CEEEEEECCGGGTSC------------------CTTSCCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEEC
T ss_pred             HcC-CcEEEEECchhhccC------------------CCCCCCccHHHHHHHHHHHHHHHHHHhh---hcCcEEEEEEeC
Confidence            766 789999999886431                  1125667899999999999999999997   789999999999


Q ss_pred             cccCCccCcchh-HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          171 VVKTNIMREVPS-FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       171 ~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      ++.|++...... ...........+++++.+|+++|+.+++++... ...+|..+..++|.
T Consensus       176 ~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~  236 (239)
T 2ekp_A          176 YVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTGQAVAVDGGF  236 (239)
T ss_dssp             SBCSGGGHHHHTCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             CccCchhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCEEEECCCc
Confidence            999998654220 111111111224567789999999999654321 34579988877774

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.94  E-value=2.6e-27  Score=198.09  Aligned_cols=190  Identities=21%  Similarity=0.233  Sum_probs=152.4

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCC------CCcCCCcccchhhhhhhhhHHHHHHhh
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT------SSRLTPEGYDQMMSTNYIGAFFLTKLL   85 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~------~~~~~~~~~~~~~~~n~~~~~~l~~~~   85 (266)
                      ++.++.||+++.++++++++++.+      .++++|+||||||+..+      ..+.+.++|++++++|+.+++.+++.+
T Consensus        59 ~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~  132 (280)
T 1xkq_A           59 QVNSVVADVTTEDGQDQIINSTLK------QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKV  132 (280)
T ss_dssp             GEEEEECCTTSHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             ceEEEEecCCCHHHHHHHHHHHHH------hcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence            789999999999999999999988      55899999999998642      446778899999999999999999999


Q ss_pred             HHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCC-ChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEE
Q 024553           86 LPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCY-PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSV  164 (266)
Q Consensus        86 ~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v  164 (266)
                      +|.|++++  ++||++||..+..                    +. ++...|+++|++++.++++++.++.   +.+|+|
T Consensus       133 ~~~~~~~~--g~iv~isS~~~~~--------------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v  187 (280)
T 1xkq_A          133 KPHLVASK--GEIVNVSSIVAGP--------------------QAQPDFLYYAIAKAALDQYTRSTAIDLA---KFGIRV  187 (280)
T ss_dssp             HHHHHHHT--CEEEEECCGGGSS--------------------SCCCSSHHHHHHHHHHHHHHHHHHHHHH---TTTCEE
T ss_pred             HHHhhcCC--CcEEEecCccccC--------------------CCCCcccHHHHHHHHHHHHHHHHHHHhc---cCCeEE
Confidence            99998654  8999999988632                    33 5667899999999999999999997   789999


Q ss_pred             EEecCCcccCCccCcc--hhHH--HHHHH----HHHHHhhcCCCHHHHHHHHHHHhcC--CCCcccceeecCCCcccc
Q 024553          165 IAADPGVVKTNIMREV--PSFL--SLMAF----TVLKLLGLLQSPEKGINSVLDAALA--PPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       165 ~~v~PG~v~T~~~~~~--~~~~--~~~~~----~~~~~~~~~~~p~~~a~~~~~~~~~--~~~~~G~~~~~~~g~~~~  232 (266)
                      |+|+||+|+|++....  ....  .....    ....+++++.+|+++|+.+++++..  ....+|..+..++|..+.
T Consensus       188 ~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~~~~  265 (280)
T 1xkq_A          188 NSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSLV  265 (280)
T ss_dssp             EEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             EEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHHhcCcccccCccCCeEEECCCcccc
Confidence            9999999999986543  1110  00000    0112456788999999999965543  235689999888886554

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.94  E-value=2.5e-27  Score=203.51  Aligned_cols=203  Identities=10%  Similarity=0.003  Sum_probs=159.3

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC---------------CCC---------------
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---------------ATS---------------   59 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~---------------~~~---------------   59 (266)
                      +.++..+.||+++.++++++++++.+      .++++|+||||||..               .+.               
T Consensus       108 G~~a~~i~~Dvtd~~~v~~~v~~i~~------~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~  181 (405)
T 3zu3_A          108 GLYAKSINGDAFSDEIKQLTIDAIKQ------DLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEV  181 (405)
T ss_dssp             TCCEEEEESCTTSHHHHHHHHHHHHH------HTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTE
T ss_pred             CCceEEEECCCCCHHHHHHHHHHHHH------HcCCCCEEEEcCccccccCccccccccccccccccccccccccccccc
Confidence            45789999999999999999999999      679999999999974               233               


Q ss_pred             ------CcCCCcccchhhhhhhhhHH-HHHHhhHHH-HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCC
Q 024553           60 ------SRLTPEGYDQMMSTNYIGAF-FLTKLLLPL-LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYP  131 (266)
Q Consensus        60 ------~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~-l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (266)
                            .+.+.++|+.++++|..+.+ ++++.+++. |+. + +|+||++||+.+..                    +.+
T Consensus       182 ~~~~~i~~~t~ee~~~~v~Vn~~~~~~~~~~~~~~~~m~~-~-gG~IVniSSi~~~~--------------------~~p  239 (405)
T 3zu3_A          182 IKESVLQPATQSEIDSTVAVMGGEDWQMWIDALLDAGVLA-E-GAQTTAFTYLGEKI--------------------THD  239 (405)
T ss_dssp             EEEEEECCCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCEE-E-EEEEEEEECCCCGG--------------------GTT
T ss_pred             cccccCCCCCHHHHHHHHHhhchhHHHHHHHHHHHHhhhh-C-CcEEEEEeCchhhC--------------------cCC
Confidence                  45688899999999999998 788877654 444 3 58999999998743                    445


Q ss_pred             hh--hcchHhHHHHHHHHHHHHHhhCCCCCC-CeEEEEecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHH
Q 024553          132 CA--RIYEYSKLCLLIFSYELHRNLGLDKSR-HVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSV  208 (266)
Q Consensus       132 ~~--~~Y~~sK~~~~~~~~~la~~~~~~~~~-~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~  208 (266)
                      ..  .+|++||+++..++++||.+++   +. ||+||+|+||+|.|++....+... ........++++..+|+++++.+
T Consensus       240 ~~~~~aY~AaKaal~~ltrsLA~Ela---~~~GIRVNaVaPG~i~T~~s~~ip~~p-~y~~~l~~~mkr~G~~Ed~a~~i  315 (405)
T 3zu3_A          240 IYWNGSIGAAKKDLDQKVLAIRESLA---AHGGGDARVSVLKAVVSQASSAIPMMP-LYLSLLFKVMKEKGTHEGCIEQV  315 (405)
T ss_dssp             TTTTSHHHHHHHHHHHHHHHHHHHHH---TTTSCEEEEEECCCCCCHHHHTSTTHH-HHHHHHHHHHHHHTCCCCHHHHH
T ss_pred             CccchHHHHHHHHHHHHHHHHHHHhC---cccCeEEEEEEeCCCcCchhhcCCCCc-HHHHHHHHHHhcCCCcHHHHHHH
Confidence            44  7899999999999999999998   88 999999999999999877654321 11222333567778999999999


Q ss_pred             HHHhcCCCCcccceeecCCCccccCCccccCHHHHHHH
Q 024553          209 LDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGEL  246 (266)
Q Consensus       209 ~~~~~~~~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~  246 (266)
                      .+++  ++.-.|.-...+++.-+..++|-.+++.+.+.
T Consensus       316 ~~L~--sd~l~~~~~~~D~~~~~r~d~~e~~~~~q~~~  351 (405)
T 3zu3_A          316 YSLY--KDSLCGDSPHMDQEGRLRADYKELDPEVQNQV  351 (405)
T ss_dssp             HHHH--HHTTSSSCCCBCTTSCEECCHHHHCHHHHHHH
T ss_pred             HHHH--hccccCCCCCcCCCcCCCCchhhcCHHHHHHH
Confidence            9554  43444554444566678888888888777543

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.94  E-value=1.2e-26  Score=192.23  Aligned_cols=179  Identities=19%  Similarity=0.236  Sum_probs=139.7

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC---CCCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+.   .+..+.+.++|++++++|+.|++.+++.++
T Consensus        77 ~~~~~~~~~D~~~~~~v~~~~~~~~~------~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~  150 (262)
T 3rkr_A           77 GGEAESHACDLSHSDAIAAFATGVLA------AHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFA  150 (262)
T ss_dssp             TCEEEEEECCTTCHHHHHHHHHHHHH------HHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CCceeEEEecCCCHHHHHHHHHHHHH------hcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            45789999999999999999999988      568999999999984   345677889999999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |+|++++ .++||++||..+.                    .+.++...|+++|++++.++++++.++.   +.+|+|++
T Consensus       151 ~~~~~~~-~g~iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gi~v~~  206 (262)
T 3rkr_A          151 PAMIAAK-RGHIINISSLAGK--------------------NPVADGAAYTASKWGLNGLMTSAAEELR---QHQVRVSL  206 (262)
T ss_dssp             HHHHHTT-CCEEEEECSSCSS--------------------CCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEE
T ss_pred             HHHHhCC-CceEEEEechhhc--------------------CCCCCCchHHHHHHHHHHHHHHHHHHhh---hcCcEEEE
Confidence            9998876 7899999999873                    3566678899999999999999999997   78999999


Q ss_pred             ecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC-CcccceeecCC
Q 024553          167 ADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGK  227 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~-~~~G~~~~~~~  227 (266)
                      |+||+|+|++.......         .+..++.+|+|+|+.+++++.... ...|..+..+.
T Consensus       207 v~PG~v~t~~~~~~~~~---------~~~~~~~~p~dvA~~v~~l~s~~~~~~~g~~~i~p~  259 (262)
T 3rkr_A          207 VAPGSVRTEFGVGLSAK---------KSALGAIEPDDIADVVALLATQADQSFISEVLVRPT  259 (262)
T ss_dssp             EEECCC-------------------------CCCHHHHHHHHHHHHTCCTTCCEEEEEEECC
T ss_pred             EecCCCcCCcccccccc---------cccccCCCHHHHHHHHHHHhcCccccccCcEEeccc
Confidence            99999999987654321         122356699999999996554332 33455554343

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.94  E-value=2.6e-27  Score=194.55  Aligned_cols=185  Identities=18%  Similarity=0.220  Sum_probs=146.3

Q ss_pred             EEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcC
Q 024553           15 AFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS   92 (266)
Q Consensus        15 ~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~   92 (266)
                      .+.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.+++.+++.++|.|+++
T Consensus        57 ~~~~D~~~~~~~~~~~~~~~~------~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~  130 (247)
T 1uzm_A           57 GVEVDVTDSDAVDRAFTAVEE------HQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN  130 (247)
T ss_dssp             EEECCTTCHHHHHHHHHHHHH------HHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred             CeeccCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence            488999999999999999988      5589999999999863  44677889999999999999999999999999887


Q ss_pred             CCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcc
Q 024553           93 PVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVV  172 (266)
Q Consensus        93 ~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v  172 (266)
                      + .++||++||..+.                    .+.+....|+.+|++++.++++++.++.   +.+|++|+|+||++
T Consensus       131 ~-~g~iv~isS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v  186 (247)
T 1uzm_A          131 K-FGRMIFIGSVSGL--------------------WGIGNQANYAASKAGVIGMARSIARELS---KANVTANVVAPGYI  186 (247)
T ss_dssp             T-CEEEEEECCCCC-------------------------CCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSB
T ss_pred             C-CCEEEEECCHhhc--------------------cCCCCChhHHHHHHHHHHHHHHHHHHhh---hcCcEEEEEEeCCC
Confidence            6 7899999998863                    2445667899999999999999999997   78999999999999


Q ss_pred             cCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCcc
Q 024553          173 KTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  230 (266)
Q Consensus       173 ~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~  230 (266)
                      +|++......... .......+++++.+|+++|+.+++++... ...+|..+..++|..
T Consensus       187 ~t~~~~~~~~~~~-~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~i~vdgG~~  244 (247)
T 1uzm_A          187 DTDMTRALDERIQ-QGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGMG  244 (247)
T ss_dssp             CCHHHHHSCHHHH-HHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             cccchhhcCHHHH-HHHHhcCCCCCCcCHHHHHHHHHHHcCccccCCcCCEEEECCCcc
Confidence            9998654322111 11111224567789999999999665432 345899988877753

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.94  E-value=1.1e-26  Score=195.09  Aligned_cols=190  Identities=18%  Similarity=0.130  Sum_probs=149.1

Q ss_pred             CccEEEEEecCCC----HHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CC-----Cc-----CCCcccchhhhh
Q 024553           10 DARLEAFQVDLSS----FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TS-----SR-----LTPEGYDQMMST   73 (266)
Q Consensus        10 ~~~~~~i~~Dls~----~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~-----~~-----~~~~~~~~~~~~   73 (266)
                      +.++.++.||+++    .++++++++++.+      .++++|+||||||+..  +.     .+     .+.++|++++++
T Consensus        73 ~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~------~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (288)
T 2x9g_A           73 SNTAVVCQADLTNSNVLPASCEEIINSCFR------AFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGT  146 (288)
T ss_dssp             TTCEEEEECCCSCSTTHHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHH
T ss_pred             CCceEEEEeecCCccCCHHHHHHHHHHHHH------hcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHH
Confidence            4578999999999    9999999999988      5589999999999863  33     34     667889999999


Q ss_pred             hhhhHHHHHHhhHHHHhcCCC-----CCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHH
Q 024553           74 NYIGAFFLTKLLLPLLKNSPV-----PSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSY  148 (266)
Q Consensus        74 n~~~~~~l~~~~~~~l~~~~~-----~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~  148 (266)
                      |+.+++.+++.++|.|++++.     .++||++||..+.                    .+.++...|+++|+++..+++
T Consensus       147 N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~l~~  206 (288)
T 2x9g_A          147 NAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVD--------------------QPCMAFSLYNMGKHALVGLTQ  206 (288)
T ss_dssp             HTHHHHHHHHHHHHHC--------CCCEEEEEECCTTTT--------------------SCCTTCHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEeccccc--------------------CCCCCCchHHHHHHHHHHHHH
Confidence            999999999999999976531     4799999998873                    356677889999999999999


Q ss_pred             HHHHhhCCCCCCCeEEEEecCCcccCCccCcchhHHHHHHHHHHHHhhcC-CCHHHHHHHHHHHhcC-CCCcccceeecC
Q 024553          149 ELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLL-QSPEKGINSVLDAALA-PPETSGVYFFGG  226 (266)
Q Consensus       149 ~la~~~~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~a~~~~~~~~~-~~~~~G~~~~~~  226 (266)
                      +++.++.   +.+|+||+|+||+|.|++ ...+..  ........+++++ .+|+++|+.+++++.. ....+|.++..+
T Consensus       207 ~la~e~~---~~gI~vn~v~PG~v~t~~-~~~~~~--~~~~~~~~p~~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vd  280 (288)
T 2x9g_A          207 SAALELA---PYGIRVNGVAPGVSLLPV-AMGEEE--KDKWRRKVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVD  280 (288)
T ss_dssp             HHHHHHG---GGTEEEEEEEESSCSCCT-TSCHHH--HHHHHHTCTTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHhh---ccCeEEEEEEeccccCcc-ccChHH--HHHHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCCEEEEC
Confidence            9999997   789999999999999998 422211  1111222355677 8999999999966543 235689999888


Q ss_pred             CCccc
Q 024553          227 KGRTV  231 (266)
Q Consensus       227 ~g~~~  231 (266)
                      +|..+
T Consensus       281 GG~~~  285 (288)
T 2x9g_A          281 GGLSL  285 (288)
T ss_dssp             TTGGG
T ss_pred             cchhh
Confidence            77543

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.94  E-value=5.6e-27  Score=195.80  Aligned_cols=193  Identities=18%  Similarity=0.223  Sum_probs=146.3

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcC----CCcccchhhhhhhhhHHHHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRL----TPEGYDQMMSTNYIGAFFLTK   83 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~----~~~~~~~~~~~n~~~~~~l~~   83 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.    +.++|++++++|+.|++.+++
T Consensus        57 ~~~~~~~~~D~~~~~~~~~~~~~~~~------~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  130 (278)
T 1spx_A           57 EQNVNSVVADVTTDAGQDEILSTTLG------KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTK  130 (278)
T ss_dssp             GGGEEEEECCTTSHHHHHHHHHHHHH------HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCceeEEecccCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHH
Confidence            45789999999999999999999988      5589999999999863  34455    788999999999999999999


Q ss_pred             hhHHHHhcCCCCCeEEEEcCCcc-cccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCe
Q 024553           84 LLLPLLKNSPVPSRIVNVTSFTH-RNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHV  162 (266)
Q Consensus        84 ~~~~~l~~~~~~~~iv~vsS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i  162 (266)
                      .++|.|++++  ++||++||..+ ..                    +.++...|+.+|++++.++++++.++.   +.+|
T Consensus       131 ~~~~~~~~~~--g~iv~isS~~~~~~--------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi  185 (278)
T 1spx_A          131 KAVPHLSSTK--GEIVNISSIASGLH--------------------ATPDFPYYSIAKAAIDQYTRNTAIDLI---QHGI  185 (278)
T ss_dssp             HHHHHHHHHT--CEEEEECCTTSSSS--------------------CCTTSHHHHHHHHHHHHHHHHHHHHHG---GGTC
T ss_pred             HHHHHHhhcC--CeEEEEeccccccc--------------------CCCCccHHHHHHHHHHHHHHHHHHHHH---hcCc
Confidence            9999998653  89999999876 32                    345667899999999999999999997   7899


Q ss_pred             EEEEecCCcccCCccCcchh--HHH------HHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC-C-cccceeecCCCcccc
Q 024553          163 SVIAADPGVVKTNIMREVPS--FLS------LMAFTVLKLLGLLQSPEKGINSVLDAALAPP-E-TSGVYFFGGKGRTVN  232 (266)
Q Consensus       163 ~v~~v~PG~v~T~~~~~~~~--~~~------~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~-~-~~G~~~~~~~g~~~~  232 (266)
                      ++|+|+||++.|++......  ...      ........+++++.+|+++|+.+++++..+. . .+|..+..++|....
T Consensus       186 ~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~  265 (278)
T 1spx_A          186 RVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLI  265 (278)
T ss_dssp             EEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             EEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCCcCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccc
Confidence            99999999999998654211  000      1111112245678899999999996553322 2 679999888887654


Q ss_pred             C
Q 024553          233 S  233 (266)
Q Consensus       233 ~  233 (266)
                      .
T Consensus       266 ~  266 (278)
T 1spx_A          266 M  266 (278)
T ss_dssp             -
T ss_pred             c
Confidence            3

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.94  E-value=7.6e-27  Score=193.51  Aligned_cols=189  Identities=22%  Similarity=0.224  Sum_probs=151.4

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      ++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.+++.+++.++|.|
T Consensus        59 ~~~~~~~D~~d~~~v~~~~~~~~~------~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~  132 (263)
T 3ak4_A           59 GGFAVEVDVTKRASVDAAMQKAID------ALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHF  132 (263)
T ss_dssp             CCEEEECCTTCHHHHHHHHHHHHH------HHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             CCeEEEEeCCCHHHHHHHHHHHHH------HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            578899999999999999999988      5589999999999863  44567888999999999999999999999999


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      ++++..++||++||..+.                    .+.+....|+.+|++++.++++++.++.   +.+|++++|+|
T Consensus       133 ~~~~~~g~iv~isS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~P  189 (263)
T 3ak4_A          133 LASNTKGVIVNTASLAAK--------------------VGAPLLAHYSASKFAVFGWTQALAREMA---PKNIRVNCVCP  189 (263)
T ss_dssp             HHTTCCCEEEEECCGGGT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEE
T ss_pred             HhcCCCeEEEEecccccc--------------------cCCCCchhHHHHHHHHHHHHHHHHHHHh---HcCeEEEEEec
Confidence            875435899999998863                    2455677899999999999999999997   78999999999


Q ss_pred             CcccCCccCcchh----------HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          170 GVVKTNIMREVPS----------FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       170 G~v~T~~~~~~~~----------~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      |+++|++......          ...........+++++.+|+|+|+.+++++... ...+|..+..++|.
T Consensus       190 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~  260 (263)
T 3ak4_A          190 GFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLASDAARFMTGQGINVTGGV  260 (263)
T ss_dssp             CSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred             ccccChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECcCE
Confidence            9999998643210          000111111225567889999999999665432 24579888877774

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.94  E-value=1.2e-26  Score=194.14  Aligned_cols=191  Identities=16%  Similarity=0.145  Sum_probs=154.0

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEc-CCCCCC--C-----CcCCCcccchhhhhhhhhHHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINN-AGILAT--S-----SRLTPEGYDQMMSTNYIGAFFL   81 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~n-AG~~~~--~-----~~~~~~~~~~~~~~n~~~~~~l   81 (266)
                      +.++.++.||+++.++++++++++ +      .++++|++||| ||+...  .     .+.+.++|++++++|+.+++.+
T Consensus        75 ~~~~~~~~~Dl~~~~~v~~~~~~~-~------~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l  147 (281)
T 3ppi_A           75 GNRAEFVSTNVTSEDSVLAAIEAA-N------QLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNV  147 (281)
T ss_dssp             CTTEEEEECCTTCHHHHHHHHHHH-T------TSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHH
T ss_pred             CCceEEEEcCCCCHHHHHHHHHHH-H------HhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHH
Confidence            347899999999999999999999 5      56899999999 554421  1     2467778999999999999999


Q ss_pred             HHhhHHHHhcC-----CCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCC
Q 024553           82 TKLLLPLLKNS-----PVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGL  156 (266)
Q Consensus        82 ~~~~~~~l~~~-----~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~  156 (266)
                      ++.+++.|.+.     ...++||++||..+.                    .+.++...|+++|++++.++++++.++. 
T Consensus       148 ~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~-  206 (281)
T 3ppi_A          148 ARLVAASIAAAEPRENGERGALVLTASIAGY--------------------EGQIGQTAYAAAKAGVIGLTIAAARDLS-  206 (281)
T ss_dssp             HHHHHHHHHTSCCCTTSCCEEEEEECCGGGT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG-
T ss_pred             HHHHHHHHHhhcccccCCCeEEEEEeccccc--------------------CCCCCCcccHHHHHHHHHHHHHHHHHHh-
Confidence            99999999862     226899999999873                    3566778999999999999999999997 


Q ss_pred             CCCCCeEEEEecCCcccCCccCcchhHHHHHHHHHHHHh-hcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          157 DKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL-GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       157 ~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                        +.+|+|++|+||+|+|++.......... ......++ +++.+|+++|+.+++++. .+..+|..+..++|..+.
T Consensus       207 --~~gi~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~pedvA~~v~~l~s-~~~~tG~~i~vdGG~~~~  279 (281)
T 3ppi_A          207 --SAGIRVNTIAPGTMKTPIMESVGEEALA-KFAANIPFPKRLGTPDEFADAAAFLLT-NGYINGEVMRLDGAQRFT  279 (281)
T ss_dssp             --GGTEEEEEEEECSBCCHHHHTTCHHHHH-HHHHTCCSSSSCBCHHHHHHHHHHHHH-CSSCCSCEEEESTTCCCC
T ss_pred             --hcCeEEEEEecCcCCchhhhcccHHHHH-HHHhcCCCCCCCCCHHHHHHHHHHHHc-CCCcCCcEEEECCCcccC
Confidence              7899999999999999988765443211 11222233 677899999999997664 457789999888887654

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.94  E-value=9.2e-28  Score=198.08  Aligned_cols=190  Identities=19%  Similarity=0.172  Sum_probs=152.9

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.+|+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++.+++.++|.
T Consensus        51 ~~~~~~~~D~~~~~~~~~~~~~~~~------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~  124 (254)
T 1hdc_A           51 DAARYQHLDVTIEEDWQRVVAYARE------EFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPA  124 (254)
T ss_dssp             GGEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CceeEEEecCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            4688999999999999999999988      5589999999999863  4456788999999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |++++ .++||++||..+.                    .+.++...|+.+|++++.++++++.++.   +.+|+||+|+
T Consensus       125 ~~~~~-~g~iv~isS~~~~--------------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~  180 (254)
T 1hdc_A          125 MKDAG-GGSIVNISSAAGL--------------------MGLALTSSYGASKWGVRGLSKLAAVELG---TDRIRVNSVH  180 (254)
T ss_dssp             HHHHT-CEEEEEECCGGGT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEE
T ss_pred             HHHcC-CCEEEEECchhhc--------------------cCCCCchhHHHHHHHHHHHHHHHHHHhh---hcCeEEEEEe
Confidence            98766 7899999998873                    2456678899999999999999999997   7899999999


Q ss_pred             CCcccCCccCcchhHHHHHHHHHHHHhhcCC-CHHHHHHHHHHHhcCC-CCcccceeecCCCccc
Q 024553          169 PGVVKTNIMREVPSFLSLMAFTVLKLLGLLQ-SPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  231 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~  231 (266)
                      ||+++|++........ ........+++++. +|+++|+.+++++... ...+|..+..++|...
T Consensus       181 Pg~v~t~~~~~~~~~~-~~~~~~~~p~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~  244 (254)
T 1hdc_A          181 PGMTYTPMTAETGIRQ-GEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGGWTT  244 (254)
T ss_dssp             ECSBCCHHHHHHTCCC-STTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             cccCcCccccccchhH-HHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCCCCCEEEECCCccc
Confidence            9999998754321100 00000112445677 9999999999665432 2467999988888654

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.94  E-value=1.5e-26  Score=193.06  Aligned_cols=186  Identities=16%  Similarity=0.110  Sum_probs=145.1

Q ss_pred             ccEEEEEecCCCH----HHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCC-----------cccchhhhh
Q 024553           11 ARLEAFQVDLSSF----QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTP-----------EGYDQMMST   73 (266)
Q Consensus        11 ~~~~~i~~Dls~~----~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~-----------~~~~~~~~~   73 (266)
                      .++.++.||+++.    ++++++++++.+      .++++|+||||||+..  +..+.+.           ++|++++++
T Consensus        62 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  135 (276)
T 1mxh_A           62 GSAVLCKGDLSLSSSLLDCCEDIIDCSFR------AFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGS  135 (276)
T ss_dssp             TCEEEEECCCSSSTTHHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHH
T ss_pred             CceEEEeccCCCccccHHHHHHHHHHHHH------hcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHh
Confidence            4689999999999    999999999988      5589999999999863  4455666           889999999


Q ss_pred             hhhhHHHHHHhhHHHHhcCCCC------CeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHH
Q 024553           74 NYIGAFFLTKLLLPLLKNSPVP------SRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFS  147 (266)
Q Consensus        74 n~~~~~~l~~~~~~~l~~~~~~------~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~  147 (266)
                      |+.+++.+++.++|.|+ ++ .      ++||++||..+..                    +.++...|+++|++++.++
T Consensus       136 N~~g~~~l~~~~~~~~~-~~-~~~~~~~g~iv~isS~~~~~--------------------~~~~~~~Y~asK~a~~~l~  193 (276)
T 1mxh_A          136 NAVAPLFLIRAFARRQG-EG-GAWRSRNLSVVNLCDAMTDL--------------------PLPGFCVYTMAKHALGGLT  193 (276)
T ss_dssp             HTHHHHHHHHHHHHTC---------CCCEEEEEECCGGGGS--------------------CCTTCHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHh-cC-CCCCCCCcEEEEECchhhcC--------------------CCCCCeehHHHHHHHHHHH
Confidence            99999999999999997 43 4      8999999988742                    4566788999999999999


Q ss_pred             HHHHHhhCCCCCCCeEEEEecCCcccCCccCcchhHHHHHHHHHHHHhhc-CCCHHHHHHHHHHHhcCC-CCcccceeec
Q 024553          148 YELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGL-LQSPEKGINSVLDAALAP-PETSGVYFFG  225 (266)
Q Consensus       148 ~~la~~~~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~a~~~~~~~~~~-~~~~G~~~~~  225 (266)
                      ++++.++.   +.+|+||+|+||+|.|+  ....+... .......++++ +.+|+++|+.+++++... ...+|.++..
T Consensus       194 ~~la~e~~---~~gi~v~~v~PG~v~t~--~~~~~~~~-~~~~~~~p~~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~v  267 (276)
T 1mxh_A          194 RAAALELA---PRHIRVNAVAPGLSLLP--PAMPQETQ-EEYRRKVPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKV  267 (276)
T ss_dssp             HHHHHHHG---GGTEEEEEEEESSBSCC--SSSCHHHH-HHHHTTCTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHHHHHHh---hcCeEEEEEecCcccCC--ccCCHHHH-HHHHhcCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEE
Confidence            99999997   78999999999999999  33222111 11111234566 789999999999655422 2457998887


Q ss_pred             CCCcc
Q 024553          226 GKGRT  230 (266)
Q Consensus       226 ~~g~~  230 (266)
                      ++|..
T Consensus       268 dgG~~  272 (276)
T 1mxh_A          268 DGGLI  272 (276)
T ss_dssp             STTGG
T ss_pred             CCchh
Confidence            77753

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.94  E-value=9.8e-27  Score=194.87  Aligned_cols=188  Identities=16%  Similarity=0.237  Sum_probs=149.8

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++++++.++|
T Consensus        78 ~~~~~~~~~D~~~~~~~~~~~~~~~~------~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  151 (283)
T 1g0o_A           78 GSDAACVKANVGVVEDIVRMFEEAVK------IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYK  151 (283)
T ss_dssp             TCCEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCCeEEEEcCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            45789999999999999999999988      5589999999999863  455678899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCC-hhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYP-CARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      .|+  + .++||++||..+..                    +.+ ....|+++|++++.++++++.++.   +.+|+||+
T Consensus       152 ~~~--~-~g~iv~isS~~~~~--------------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~  205 (283)
T 1g0o_A          152 HLE--I-GGRLILMGSITGQA--------------------KAVPKHAVYSGSKGAIETFARCMAIDMA---DKKITVNV  205 (283)
T ss_dssp             HSC--T-TCEEEEECCGGGTC--------------------SSCSSCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEE
T ss_pred             HHh--c-CCeEEEEechhhcc--------------------CCCCCCcchHHHHHHHHHHHHHHHHHhc---ccCeEEEE
Confidence            993  2 68999999988632                    222 367899999999999999999997   78999999


Q ss_pred             ecCCcccCCccCcch----------hHHHHHHHHH--HHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCc
Q 024553          167 ADPGVVKTNIMREVP----------SFLSLMAFTV--LKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  229 (266)
Q Consensus       167 v~PG~v~T~~~~~~~----------~~~~~~~~~~--~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~  229 (266)
                      |+||+|+|++.....          ..........  ..+++++.+|+++|+.+++++.. ....+|..+..++|.
T Consensus       206 v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdgG~  281 (283)
T 1g0o_A          206 VAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA  281 (283)
T ss_dssp             EEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             EecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCCc
Confidence            999999999754321          0111111111  23567788999999999965542 234679988877774

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.94  E-value=7.2e-27  Score=191.58  Aligned_cols=180  Identities=15%  Similarity=0.099  Sum_probs=142.5

Q ss_pred             CCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC-----CCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCC
Q 024553           20 LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA-----TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPV   94 (266)
Q Consensus        20 ls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~-----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~   94 (266)
                      +.+.++++++++++.+      .++++|+||||||+..     +..+.+.++|++++++|+.+++.+++.++|+|++++ 
T Consensus        53 ~~~~~~v~~~~~~~~~------~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-  125 (244)
T 1zmo_A           53 ALAEQKPERLVDATLQ------HGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAG-  125 (244)
T ss_dssp             ECCCCCGGGHHHHHGG------GSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-
T ss_pred             ccCHHHHHHHHHHHHH------HcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-
Confidence            3467778888888887      6789999999999863     345678899999999999999999999999998876 


Q ss_pred             CCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcccC
Q 024553           95 PSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKT  174 (266)
Q Consensus        95 ~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~T  174 (266)
                      .++||++||..+.                    .+.+....|+++|++++.++++++.++.   +.+|+||+|+||+|+|
T Consensus       126 ~g~iv~isS~~~~--------------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~T  182 (244)
T 1zmo_A          126 GASVIFITSSVGK--------------------KPLAYNPLYGPARAATVALVESAAKTLS---RDGILLYAIGPNFFNN  182 (244)
T ss_dssp             CEEEEEECCGGGT--------------------SCCTTCTTHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEESSBCB
T ss_pred             CcEEEEECChhhC--------------------CCCCCchHHHHHHHHHHHHHHHHHHHHh---hcCcEEEEEeeCCCcC
Confidence            7999999998873                    3456677899999999999999999997   7899999999999999


Q ss_pred             Ccc---CcchhHHHHHHHHH-HHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          175 NIM---REVPSFLSLMAFTV-LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       175 ~~~---~~~~~~~~~~~~~~-~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      ++.   .............. ..+++++.+|+++|+.+++++... ...+|.++..++|.
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe~vA~~v~~l~s~~~~~~tG~~i~vdgG~  242 (244)
T 1zmo_A          183 PTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFLASRRAAPIVGQFFAFTGGY  242 (244)
T ss_dssp             TTTBCHHHHHHCHHHHHHHHHHCTTCSCBCHHHHHHHHHHHHTTTTGGGTTCEEEESTTC
T ss_pred             CcccccccccchHHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEeCCCC
Confidence            987   43221111111111 235677889999999999665432 24579988877663

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.94  E-value=5.3e-27  Score=195.19  Aligned_cols=190  Identities=19%  Similarity=0.239  Sum_probs=153.1

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC---CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .+.++.||+++.++++++++++.+      .++++|+||||||+..   +..+.+.++|++++++|+.+++.+++.++|+
T Consensus        55 ~~~~~~~Dv~d~~~v~~~~~~~~~------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  128 (270)
T 1yde_A           55 GAVFILCDVTQEDDVKTLVSETIR------RFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPY  128 (270)
T ss_dssp             TEEEEECCTTSHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCeEEEcCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            378999999999999999999988      5589999999999863   3456788899999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |+++  .++||++||..+..                    +.+....|+.+|++++.++++++.++.   +.+|+||+|+
T Consensus       129 ~~~~--~g~iv~isS~~~~~--------------------~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~vn~v~  183 (270)
T 1yde_A          129 LRKS--QGNVINISSLVGAI--------------------GQAQAVPYVATKGAVTAMTKALALDES---PYGVRVNCIS  183 (270)
T ss_dssp             HHHH--TCEEEEECCHHHHH--------------------CCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEE
T ss_pred             HHHC--CCEEEEEcCccccC--------------------CCCCCcccHHHHHHHHHHHHHHHHHhh---hhCcEEEEEE
Confidence            9764  48999999987632                    345567899999999999999999997   7899999999


Q ss_pred             CCcccCCccCcch----hHH-HHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          169 PGVVKTNIMREVP----SFL-SLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       169 PG~v~T~~~~~~~----~~~-~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      ||++.|++.....    ... .........+++++.+|+|+|+.+++++..+...+|..+..++|..+.
T Consensus       184 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~itG~~i~vdGG~~~~  252 (270)
T 1yde_A          184 PGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASEANFCTGIELLVTGGAELG  252 (270)
T ss_dssp             ECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHHCTTCCSCEEEESTTTTSC
T ss_pred             eCccccchhhhhhhcccchHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcccCCCcCCCEEEECCCeecc
Confidence            9999999754321    111 111111223567788999999999976655456689888888886553

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.94  E-value=4.4e-26  Score=187.33  Aligned_cols=185  Identities=20%  Similarity=0.242  Sum_probs=138.4

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.||+++.+++.++++          ..+++|+||||||+..  +..+.+.++|++++++|+.|++.+++.++|.
T Consensus        60 ~~~~~~~~D~~~~~~~~~~~~----------~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~  129 (249)
T 3f9i_A           60 DNYTIEVCNLANKEECSNLIS----------KTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKK  129 (249)
T ss_dssp             SSEEEEECCTTSHHHHHHHHH----------TCSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             cCccEEEcCCCCHHHHHHHHH----------hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            368899999999999988775          3468999999999874  3456788999999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |++++ .++||++||..+.                    .+.++...|+++|++++.++++++.++.   +.+|++++|+
T Consensus       130 ~~~~~-~g~iv~isS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~  185 (249)
T 3f9i_A          130 MIQKR-YGRIINISSIVGI--------------------AGNPGQANYCASKAGLIGMTKSLSYEVA---TRGITVNAVA  185 (249)
T ss_dssp             HHHHT-CEEEEEECCCCC----------------------CCSCSHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEE
T ss_pred             HHhCC-CcEEEEEccHHhc--------------------cCCCCCchhHHHHHHHHHHHHHHHHHHH---HcCcEEEEEe
Confidence            98766 7899999998873                    3556678899999999999999999997   7899999999


Q ss_pred             CCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCcc
Q 024553          169 PGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  230 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~  230 (266)
                      ||+|+|++........ ........+.+++.+|+++|+.+++++... ...+|..+..++|..
T Consensus       186 PG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~~  247 (249)
T 3f9i_A          186 PGFIKSDMTDKLNEKQ-REAIVQKIPLGTYGIPEDVAYAVAFLASNNASYITGQTLHVNGGML  247 (249)
T ss_dssp             ECCBC------CCHHH-HHHHHHHCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             cCccccCcccccCHHH-HHHHHhcCCCCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCCEe
Confidence            9999999987754432 222233345678889999999999655432 345799998777754

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.94  E-value=1.8e-27  Score=199.08  Aligned_cols=174  Identities=18%  Similarity=0.169  Sum_probs=139.0

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC---CCCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .+.++.||+++.++++++++++.+      .++++|+||||||+.   .+..+.+.++|++++++|+.|++.+++.++|.
T Consensus        84 ~~~~~~~Dv~d~~~v~~~~~~~~~------~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~  157 (281)
T 4dry_A           84 IVRAVVCDVGDPDQVAALFAAVRA------EFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRM  157 (281)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHH------HHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             eEEEEEcCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            468999999999999999999998      568999999999986   34567889999999999999999999999999


Q ss_pred             HhcCC-CCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           89 LKNSP-VPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        89 l~~~~-~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      |++++ ..|+||++||..+.                    .+.++...|+++|++++.++++++.+++   +.+|+||+|
T Consensus       158 ~~~~~~~~g~IV~isS~~~~--------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v  214 (281)
T 4dry_A          158 MKAQTPRGGRIINNGSISAQ--------------------TPRPNSAPYTATKHAITGLTKSTALDGR---MHDIACGQI  214 (281)
T ss_dssp             HHHSSSCCEEEEEECCGGGT--------------------CCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             HHhcCCCCcEEEEECCHHhC--------------------CCCCCChhHHHHHHHHHHHHHHHHHHhc---ccCeEEEEE
Confidence            98764 25899999998873                    3567778999999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP  216 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~  216 (266)
                      +||+|+|++...........  ....+.+++.+|+|+|+.+++++..+.
T Consensus       215 ~PG~v~T~~~~~~~~~~~~~--~~~~~~~~~~~pedvA~~v~fL~s~~~  261 (281)
T 4dry_A          215 DIGNAATDMTARMSTGVLQA--NGEVAAEPTIPIEHIAEAVVYMASLPL  261 (281)
T ss_dssp             EEECBCC-------CEEECT--TSCEEECCCBCHHHHHHHHHHHHHSCT
T ss_pred             EECcCcChhhhhhcchhhhh--hhcccccCCCCHHHHHHHHHHHhCCCc
Confidence            99999999876542211000  001123456799999999997665554

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.94  E-value=1.2e-26  Score=191.96  Aligned_cols=185  Identities=19%  Similarity=0.244  Sum_probs=152.3

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      ++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++++++.++|.|
T Consensus        54 ~~~~~~~D~~~~~~v~~~~~~~~~------~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~  127 (260)
T 1nff_A           54 AARYVHLDVTQPAQWKAAVDTAVT------AFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPM  127 (260)
T ss_dssp             GEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             CceEEEecCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            488999999999999999999988      5589999999999863  45667888999999999999999999999999


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      ++++ .++||++||..+..                    +.++...|+.+|++++.++++++.++.   +.+|++++|+|
T Consensus       128 ~~~~-~g~iv~isS~~~~~--------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~P  183 (260)
T 1nff_A          128 KEAG-RGSIINISSIEGLA--------------------GTVACHGYTATKFAVRGLTKSTALELG---PSGIRVNSIHP  183 (260)
T ss_dssp             HHHT-CEEEEEECCGGGTS--------------------CCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEE
T ss_pred             HhcC-CCEEEEEeehhhcC--------------------CCCCchhHHHHHHHHHHHHHHHHHHhC---ccCcEEEEEEe
Confidence            8766 78999999988732                    455667899999999999999999997   78999999999


Q ss_pred             CcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCcccc
Q 024553          170 GVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  232 (266)
Q Consensus       170 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~~  232 (266)
                      |++.|++.. ..... ..    ..+++++.+|+++|+.+++++... ...+|..+..++|....
T Consensus       184 g~v~t~~~~-~~~~~-~~----~~~~~~~~~~~dvA~~v~~l~s~~~~~~~G~~~~v~gG~~~~  241 (260)
T 1nff_A          184 GLVKTPMTD-WVPED-IF----QTALGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGGTVAG  241 (260)
T ss_dssp             CCBCSGGGT-TSCTT-CS----CCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred             CCCCCCccc-cchhh-HH----hCccCCCCCHHHHHHHHHHHhCccccCCcCCEEEECCCeecc
Confidence            999999865 11110 00    124456789999999999765432 24579988888887654

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.94  E-value=8.6e-27  Score=193.84  Aligned_cols=188  Identities=13%  Similarity=0.161  Sum_probs=149.8

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCC---CcceeeEcCCCCC-------CCCcCCCcccchhhhhhhhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHS---SIQLLINNAGILA-------TSSRLTPEGYDQMMSTNYIGAFF   80 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~---~ld~lv~nAG~~~-------~~~~~~~~~~~~~~~~n~~~~~~   80 (266)
                      .++.++.||+++.++++++++++.+      .++   ++|+||||||+..       +..+.+.++|++++++|+.+++.
T Consensus        56 ~~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~  129 (269)
T 2h7i_A           56 AKAPLLELDVQNEEHLASLAGRVTE------AIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYAS  129 (269)
T ss_dssp             SCCCEEECCTTCHHHHHHHHHHHHH------HHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHH
T ss_pred             CCceEEEccCCCHHHHHHHHHHHHH------HhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHH
Confidence            4678999999999999999999988      456   8999999999864       34567889999999999999999


Q ss_pred             HHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCC
Q 024553           81 LTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSR  160 (266)
Q Consensus        81 l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~  160 (266)
                      +++.++|+|++   .++||++||..+                     .+.+....|+++|++++.++++++.++.   +.
T Consensus       130 l~~~~~~~~~~---~g~iv~iss~~~---------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~  182 (269)
T 2h7i_A          130 MAKALLPIMNP---GGSIVGMDFDPS---------------------RAMPAYNWMTVAKSALESVNRFVAREAG---KY  182 (269)
T ss_dssp             HHHHHGGGEEE---EEEEEEEECCCS---------------------SCCTTTHHHHHHHHHHHHHHHHHHHHHH---TT
T ss_pred             HHHHHHHhhcc---CCeEEEEcCccc---------------------cccCchHHHHHHHHHHHHHHHHHHHHhc---cc
Confidence            99999999976   479999999764                     2455667899999999999999999997   78


Q ss_pred             CeEEEEecCCcccCCccCcc-----hhHHH-----H-HHHHHHHHhh-cCCCHHHHHHHHHHHhcC-CCCcccceeecCC
Q 024553          161 HVSVIAADPGVVKTNIMREV-----PSFLS-----L-MAFTVLKLLG-LLQSPEKGINSVLDAALA-PPETSGVYFFGGK  227 (266)
Q Consensus       161 ~i~v~~v~PG~v~T~~~~~~-----~~~~~-----~-~~~~~~~~~~-~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~  227 (266)
                      +|+||+|+||+|+|++....     .....     . .......+++ ++.+|+|+|+.+++++.. +...+|..+..++
T Consensus       183 gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG  262 (269)
T 2h7i_A          183 GVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADG  262 (269)
T ss_dssp             TCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEEST
T ss_pred             CcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCcccCCCCHHHHHHHHHHHhCchhccCcceEEEecC
Confidence            99999999999999976432     11100     0 1111223566 588999999999965532 2355899888887


Q ss_pred             Cccc
Q 024553          228 GRTV  231 (266)
Q Consensus       228 g~~~  231 (266)
                      |...
T Consensus       263 G~~~  266 (269)
T 2h7i_A          263 GAHT  266 (269)
T ss_dssp             TGGG
T ss_pred             Ceee
Confidence            7543

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.94  E-value=1.9e-27  Score=196.12  Aligned_cols=189  Identities=20%  Similarity=0.163  Sum_probs=150.9

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.+|+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.+++.+++.++|.
T Consensus        52 ~~~~~~~~D~~~~~~v~~~~~~~~~------~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~  125 (253)
T 1hxh_A           52 ERSMFVRHDVSSEADWTLVMAAVQR------RLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAA  125 (253)
T ss_dssp             TTEEEECCCTTCHHHHHHHHHHHHH------HHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CceEEEEccCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHH
Confidence            4688999999999999999999988      5589999999999863  4566788999999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCC--CeEEEE
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSR--HVSVIA  166 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~--~i~v~~  166 (266)
                      |++++  ++||++||..+.                    .+.++...|+.+|++++.++++++.++.   +.  +|++++
T Consensus       126 ~~~~~--g~iv~isS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~~~gi~v~~  180 (253)
T 1hxh_A          126 MKETG--GSIINMASVSSW--------------------LPIEQYAGYSASKAAVSALTRAAALSCR---KQGYAIRVNS  180 (253)
T ss_dssp             HTTTC--EEEEEECCGGGT--------------------SCCTTBHHHHHHHHHHHHHHHHHHHHHH---HHTCCEEEEE
T ss_pred             HHHcC--CEEEEEcchhhc--------------------CCCCCCccHHHHHHHHHHHHHHHHHHhh---hcCCCeEEEE
Confidence            98764  899999998873                    3456678899999999999999999986   56  899999


Q ss_pred             ecCCcccCCccCc-chhHHHHHHHHH---HHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCcc
Q 024553          167 ADPGVVKTNIMRE-VPSFLSLMAFTV---LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  230 (266)
Q Consensus       167 v~PG~v~T~~~~~-~~~~~~~~~~~~---~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~  230 (266)
                      |+||++.|++... ............   ..+++++.+|+|+|+.+++++... ...+|..+..++|..
T Consensus       181 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~~  249 (253)
T 1hxh_A          181 IHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMSGSELHADNSIL  249 (253)
T ss_dssp             EEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSSCT
T ss_pred             EEeCCccCchhhhccchhhhHHHHhhhhccCccCCCCCHHHHHHHHHHHcCccccCCCCcEEEECCCcc
Confidence            9999999997543 111100000001   124566789999999999665432 246799988777753

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.94  E-value=4.6e-26  Score=184.28  Aligned_cols=175  Identities=17%  Similarity=0.141  Sum_probs=145.2

Q ss_pred             ecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC---CCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCC
Q 024553           18 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPV   94 (266)
Q Consensus        18 ~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~   94 (266)
                      +|+++.++++++++++          +++|+||||||+.   .+..+.+.++|++++++|+.+++.+++.++|+|++   
T Consensus        42 ~D~~~~~~v~~~~~~~----------g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---  108 (223)
T 3uce_A           42 LDISDEKSVYHYFETI----------GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ---  108 (223)
T ss_dssp             CCTTCHHHHHHHHHHH----------CSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE---
T ss_pred             cCCCCHHHHHHHHHHh----------CCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC---
Confidence            8999999999988755          5799999999976   34567889999999999999999999999999976   


Q ss_pred             CCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcccC
Q 024553           95 PSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKT  174 (266)
Q Consensus        95 ~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~T  174 (266)
                      .++||++||..+.                    .+.++...|+++|++++.++++++.++.   +  |+||+|+||+++|
T Consensus       109 ~g~iv~~sS~~~~--------------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~--i~vn~v~PG~v~t  163 (223)
T 3uce_A          109 GGSITLTSGMLSR--------------------KVVANTYVKAAINAAIEATTKVLAKELA---P--IRVNAISPGLTKT  163 (223)
T ss_dssp             EEEEEEECCGGGT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHT---T--SEEEEEEECSBCS
T ss_pred             CeEEEEecchhhc--------------------cCCCCchHHHHHHHHHHHHHHHHHHhhc---C--cEEEEEEeCCCcc
Confidence            5799999998873                    3567778999999999999999999996   3  9999999999999


Q ss_pred             CccCcchhHHHH---HHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCccc
Q 024553          175 NIMREVPSFLSL---MAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  231 (266)
Q Consensus       175 ~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~  231 (266)
                      ++..........   .......+++++.+|+|+|+.+++++. +...+|..+..++|..+
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~-~~~~tG~~i~vdgG~~~  222 (223)
T 3uce_A          164 EAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAMAYLFAIQ-NSYMTGTVIDVDGGALL  222 (223)
T ss_dssp             GGGTTSCHHHHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHH-CTTCCSCEEEESTTGGG
T ss_pred             hhhhhcchhhHHHHHHHHhhcCCCCCccCHHHHHHHHHHHcc-CCCCCCcEEEecCCeec
Confidence            998765443221   112233466788899999999997654 45778999988888654

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.94  E-value=2.6e-26  Score=188.70  Aligned_cols=190  Identities=17%  Similarity=0.180  Sum_probs=152.3

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCC-----CCcCCCcccchhhhhhhhhHHHHHHh
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT-----SSRLTPEGYDQMMSTNYIGAFFLTKL   84 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~-----~~~~~~~~~~~~~~~n~~~~~~l~~~   84 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||....     ..+.+.++|++++++|+.+++.+++.
T Consensus        51 ~~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~  124 (250)
T 2cfc_A           51 ADKVLRVRADVADEGDVNAAIAATME------QFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRA  124 (250)
T ss_dssp             GGGEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             CCcEEEEEecCCCHHHHHHHHHHHHH------HhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHH
Confidence            35789999999999999999999988      55789999999998642     44667889999999999999999999


Q ss_pred             hHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEE
Q 024553           85 LLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSV  164 (266)
Q Consensus        85 ~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v  164 (266)
                      ++|.|++++ .++||++||..+.                    .+.++...|+.+|++++.++++++.++.   +.+|++
T Consensus       125 ~~~~~~~~~-~~~iv~isS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~l~~e~~---~~gi~v  180 (250)
T 2cfc_A          125 VLPHMLLQG-AGVIVNIASVASL--------------------VAFPGRSAYTTSKGAVLQLTKSVAVDYA---GSGIRC  180 (250)
T ss_dssp             HHHHHHHHT-CEEEEEECCGGGT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEE
T ss_pred             HHHHHHhCC-CCEEEEECChhhc--------------------cCCCCchhHHHHHHHHHHHHHHHHHHhc---ccCeEE
Confidence            999998766 6899999998863                    2455678899999999999999999997   789999


Q ss_pred             EEecCCcccCCccCc-chhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          165 IAADPGVVKTNIMRE-VPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       165 ~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      +.++||++.|++... ..............+++++.+|+++|+.+++++..+ ...+|..+..++|.
T Consensus       181 ~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  247 (250)
T 2cfc_A          181 NAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVNGAALVMDGAY  247 (250)
T ss_dssp             EEEEECSBCSTTTHHHHTSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSTTCTTCCSCEEEESTTG
T ss_pred             EEEEeCcCccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhhcccCCEEEECCce
Confidence            999999999998654 111111111111224566789999999999765433 24579988877765

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.94  E-value=1.7e-27  Score=203.08  Aligned_cols=189  Identities=17%  Similarity=0.174  Sum_probs=151.2

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++.+++.++|
T Consensus        85 ~~~~~~~~~Dv~d~~~v~~~~~~~~~------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~  158 (322)
T 3qlj_A           85 GGEAVADGSNVADWDQAAGLIQTAVE------TFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAA  158 (322)
T ss_dssp             TCEEEEECCCTTSHHHHHHHHHHHHH------HHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            45789999999999999999999998      5589999999999874  456788999999999999999999999999


Q ss_pred             HHhcCC-----CCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCe
Q 024553           88 LLKNSP-----VPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHV  162 (266)
Q Consensus        88 ~l~~~~-----~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i  162 (266)
                      +|++..     ..|+||++||..+..                    +.++...|++||++++.++++++.+++   +.+|
T Consensus       159 ~~~~~~~~~~~~~g~IV~isS~~~~~--------------------~~~~~~~Y~asKaal~~l~~~la~e~~---~~gI  215 (322)
T 3qlj_A          159 YWRGLSKAGKAVDGRIINTSSGAGLQ--------------------GSVGQGNYSAAKAGIATLTLVGAAEMG---RYGV  215 (322)
T ss_dssp             HHHHHHHTTCCCCEEEEEECCHHHHH--------------------CBTTCHHHHHHHHHHHHHHHHHHHHHG---GGTE
T ss_pred             HHHHccccCCCCCcEEEEEcCHHHcc--------------------CCCCCccHHHHHHHHHHHHHHHHHHhc---ccCc
Confidence            997532     137999999988743                    455678899999999999999999998   7899


Q ss_pred             EEEEecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC---CcccceeecCCCccccCC
Q 024553          163 SVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTVNSS  234 (266)
Q Consensus       163 ~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~---~~~G~~~~~~~g~~~~~~  234 (266)
                      +||+|+|| +.|++...........   . ....++.+|+|+|+.+++  +.++   ..+|.++..++|......
T Consensus       216 ~vn~v~PG-~~t~~~~~~~~~~~~~---~-~~~~~~~~pedva~~v~~--L~s~~~~~itG~~i~vdGG~~~~~~  283 (322)
T 3qlj_A          216 TVNAIAPS-ARTRMTETVFAEMMAT---Q-DQDFDAMAPENVSPLVVW--LGSAEARDVTGKVFEVEGGKIRVAE  283 (322)
T ss_dssp             EEEEEEEC-TTSCCSCCSCCC------------CCTTCGGGTHHHHHH--HTSGGGGGCCSCEEEEETTEEEEEE
T ss_pred             EEEEecCC-CCCccchhhhhhhhhc---c-ccccCCCCHHHHHHHHHH--HhCccccCCCCCEEEECCCccccCC
Confidence            99999999 9999876643221110   0 111234599999999994  4443   357999988888866443

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.94  E-value=2.1e-26  Score=199.47  Aligned_cols=206  Identities=10%  Similarity=-0.022  Sum_probs=158.7

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCC-CCcceeeEcCCCC---------------CCC--------------
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMH-SSIQLLINNAGIL---------------ATS--------------   59 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~-~~ld~lv~nAG~~---------------~~~--------------   59 (266)
                      +.++..+.||+++.++++++++++.+      .+ |+||+||||||..               .+.              
T Consensus       122 G~~a~~i~~Dvtd~~~v~~~v~~i~~------~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~  195 (422)
T 3s8m_A          122 GLYSKSINGDAFSDAARAQVIELIKT------EMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKD  195 (422)
T ss_dssp             TCCEEEEESCTTSHHHHHHHHHHHHH------HSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTT
T ss_pred             CCcEEEEEecCCCHHHHHHHHHHHHH------HcCCCCCEEEEcCccccccccccccccccccccccccccccccccccc
Confidence            45789999999999999999999999      77 8999999999972               222              


Q ss_pred             -------CcCCCcccchhhhhhhhhHH-HHHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCC
Q 024553           60 -------SRLTPEGYDQMMSTNYIGAF-FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYP  131 (266)
Q Consensus        60 -------~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (266)
                             .+.+.++|+.++++|..+.+ .+++.+++.+...+ +|+||++||+.+..                    +.+
T Consensus       196 ~~~~~~~~~~t~e~~~~~v~Vn~~~~~~~~~~a~~~~~m~~~-gG~IVniSSi~g~~--------------------~~p  254 (422)
T 3s8m_A          196 TIIQASIEPASAQEIEDTITVMGGQDWELWIDALEGAGVLAD-GARSVAFSYIGTEI--------------------TWP  254 (422)
T ss_dssp             EEEEEEECCCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEE-EEEEEEEEECCCGG--------------------GHH
T ss_pred             cccccccCCCCHHHHHHHHHhhchhHHHHHHHHHHHHHHhhC-CCEEEEEeCchhhc--------------------cCC
Confidence                   14678899999999999987 78888766433223 58999999998732                    345


Q ss_pred             hh--hcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHH
Q 024553          132 CA--RIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVL  209 (266)
Q Consensus       132 ~~--~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~  209 (266)
                      ..  .+|++||+++..++++|+.+++   +.||+||+|+||+|.|++....+.... .......++++..+|+++++.+.
T Consensus       255 ~~~~~aY~ASKaAl~~lTrsLA~Ela---~~GIRVNaVaPG~i~T~~~~~ip~~~~-~~~~~~~~m~r~G~pEdva~~v~  330 (422)
T 3s8m_A          255 IYWHGALGKAKVDLDRTAQRLNARLA---KHGGGANVAVLKSVVTQASAAIPVMPL-YISMVYKIMKEKGLHEGTIEQLD  330 (422)
T ss_dssp             HHTSHHHHHHHHHHHHHHHHHHHHHH---TTTCEEEEEEECCCCCTTGGGSTHHHH-HHHHHHHHHHHTTCCCCHHHHHH
T ss_pred             CccchHHHHHHHHHHHHHHHHHHHhC---ccCEEEEEEEcCCCcChhhhcCCCChH-HHHHHHhhhcCCcChHHHHHHHH
Confidence            55  7899999999999999999998   899999999999999999877643222 12223346778889999999999


Q ss_pred             HHhcCCCCc-ccceeecCCCccccCCccccCHHHHHHH
Q 024553          210 DAALAPPET-SGVYFFGGKGRTVNSSALSFNSKLAGEL  246 (266)
Q Consensus       210 ~~~~~~~~~-~G~~~~~~~g~~~~~~~~~~~~~~~~~~  246 (266)
                      +++...=.. .|.....+++..+...+|-.+++.+.+.
T Consensus       331 ~L~sd~ly~~~~~~~~~d~~~~~r~d~~e~~~~~q~~~  368 (422)
T 3s8m_A          331 RLFRERLYRQDGQPAEVDEQNRLRLDDWELRDDVQDAC  368 (422)
T ss_dssp             HHHHHTTTCTTCCCCCCCTTSCEESCTTTTSHHHHHHH
T ss_pred             HHhcchhhccCCCCcccCCCCCCccchhhCCHHHHHHH
Confidence            655432122 1444423455567888998888777553

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.94  E-value=3.3e-26  Score=189.37  Aligned_cols=184  Identities=17%  Similarity=0.167  Sum_probs=139.7

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCC-CCCcceeeEcCC--C-------CCCCCcCCCcccchhhhhhhhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDM-HSSIQLLINNAG--I-------LATSSRLTPEGYDQMMSTNYIGAFF   80 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~-~~~ld~lv~nAG--~-------~~~~~~~~~~~~~~~~~~n~~~~~~   80 (266)
                      .++.++.||+++.++++++++++.+      . ++++|+||||||  +       ..+..+.+.++|++++++|+.+++.
T Consensus        54 ~~~~~~~~Dv~~~~~v~~~~~~~~~------~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~  127 (260)
T 2qq5_A           54 GQCVPVVCDSSQESEVRSLFEQVDR------EQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYF  127 (260)
T ss_dssp             SEEEEEECCTTSHHHHHHHHHHHHH------HHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHH
T ss_pred             CceEEEECCCCCHHHHHHHHHHHHH------hcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHH
Confidence            4789999999999999999999976      3 589999999995  3       2355677889999999999999999


Q ss_pred             HHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCC
Q 024553           81 LTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSR  160 (266)
Q Consensus        81 l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~  160 (266)
                      +++.++|.|++++ .++||++||..+..                     ..+...|+++|++++.++++++.++.   +.
T Consensus       128 ~~~~~~~~~~~~~-~g~iv~isS~~~~~---------------------~~~~~~Y~asK~a~~~~~~~la~e~~---~~  182 (260)
T 2qq5_A          128 CSVYGARLMVPAG-QGLIVVISSPGSLQ---------------------YMFNVPYGVGKAACDKLAADCAHELR---RH  182 (260)
T ss_dssp             HHHHHHHHHGGGT-CCEEEEECCGGGTS---------------------CCSSHHHHHHHHHHHHHHHHHHHHHG---GG
T ss_pred             HHHHHHHHHhhcC-CcEEEEEcChhhcC---------------------CCCCCchHHHHHHHHHHHHHHHHHhc---cC
Confidence            9999999998766 78999999988632                     12346899999999999999999997   78


Q ss_pred             CeEEEEecCCcccCCccCcchhHHHH--HH-HH-HHHHhhcCCCHHHHHHHHHHHhcCCC--Ccccceeec
Q 024553          161 HVSVIAADPGVVKTNIMREVPSFLSL--MA-FT-VLKLLGLLQSPEKGINSVLDAALAPP--ETSGVYFFG  225 (266)
Q Consensus       161 ~i~v~~v~PG~v~T~~~~~~~~~~~~--~~-~~-~~~~~~~~~~p~~~a~~~~~~~~~~~--~~~G~~~~~  225 (266)
                      +|+||+|+||+|+|++..........  .. .. ...++++..+|+++|+.+++++....  ..+|.++..
T Consensus       183 gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~v~~l~s~~~~~~itG~~i~~  253 (260)
T 2qq5_A          183 GVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALATDPNILSLSGKVLPS  253 (260)
T ss_dssp             TCEEEEEECCCSCTTTC----------------------CHHHHHHHHHHHHHHHHTCTTGGGGTTCEEEH
T ss_pred             CeEEEEEecCccccHHHHHhhccccccchhHHHHHHhhhccCCCHHHHHHHHHHHhcCcccccccceeech
Confidence            99999999999999987543211100  00 00 11233444589999999996554332  237887763

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.94  E-value=1.1e-26  Score=196.30  Aligned_cols=177  Identities=17%  Similarity=0.218  Sum_probs=142.1

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++.+++.++|
T Consensus        79 ~~~~~~~~~Dv~d~~~v~~~~~~~~~------~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  152 (301)
T 3tjr_A           79 GFDAHGVVCDVRHLDEMVRLADEAFR------LLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLP  152 (301)
T ss_dssp             TCCEEEEECCTTCHHHHHHHHHHHHH------HHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCceEEEEccCCCHHHHHHHHHHHHH------hCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHH
Confidence            45789999999999999999999998      5589999999999873  455778999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++++..++||++||..+.                    .+.++...|++||++++.++++++.++.   +.+|+|++|
T Consensus       153 ~~~~~~~~g~iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~v~~v  209 (301)
T 3tjr_A          153 RLLEQGTGGHIAFTASFAGL--------------------VPNAGLGTYGVAKYGVVGLAETLAREVK---PNGIGVSVL  209 (301)
T ss_dssp             HHHHHCSCEEEEEECCGGGT--------------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             HHHhcCCCcEEEEeCchhhc--------------------CCCCCchHHHHHHHHHHHHHHHHHHHhc---ccCcEEEEE
Confidence            99876546899999999873                    3567788999999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHH---------HHHHHHHHhhcCCCHHHHHHHHHHHhcCC
Q 024553          168 DPGVVKTNIMREVPSFLSL---------MAFTVLKLLGLLQSPEKGINSVLDAALAP  215 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~---------~~~~~~~~~~~~~~p~~~a~~~~~~~~~~  215 (266)
                      +||+|+|++..........         ..+........+.+|+++|+.++.++...
T Consensus       210 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l~~~  266 (301)
T 3tjr_A          210 CPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAILAN  266 (301)
T ss_dssp             CCSCCCSSHHHHHHHHC----------------------CCCHHHHHHHHHHHHHHT
T ss_pred             ECCccccccccccccccchhhccccChhhhccccccccCCCCHHHHHHHHHHHHhcC
Confidence            9999999987653211100         00111112224569999999999877553

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.94  E-value=2.5e-26  Score=191.27  Aligned_cols=187  Identities=21%  Similarity=0.228  Sum_probs=142.1

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC---CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      .++.++.||+++.++++++++++.+      .++++|+||||||+..   +..+.+.++|++++++|+.|++.+++.++|
T Consensus        69 ~~~~~~~~Dv~d~~~v~~~~~~~~~------~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~  142 (272)
T 2nwq_A           69 TRVLPLTLDVRDRAAMSAAVDNLPE------EFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLP  142 (272)
T ss_dssp             SCEEEEECCTTCHHHHHHHHHTCCG------GGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CcEEEEEcCCCCHHHHHHHHHHHHH------HhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4689999999999999999999887      5689999999999853   455778899999999999999999999999


Q ss_pred             HHhcCCCCC-eEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           88 LLKNSPVPS-RIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        88 ~l~~~~~~~-~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      .|++++ .+ +||++||..+.                    .+.++...|+++|++++.++++++.++.   +.+|+||+
T Consensus       143 ~m~~~~-~g~~IV~isS~~~~--------------------~~~~~~~~Y~asKaa~~~l~~~la~el~---~~gIrvn~  198 (272)
T 2nwq_A          143 RLIAHG-AGASIVNLGSVAGK--------------------WPYPGSHVYGGTKAFVEQFSLNLRCDLQ---GTGVRVTN  198 (272)
T ss_dssp             HHHHHC-TTCEEEEECCGGGT--------------------SCCTTCHHHHHHHHHHHHHHHHHHTTCT---TSCCEEEE
T ss_pred             HHHhcC-CCcEEEEeCCchhc--------------------cCCCCCchHHHHHHHHHHHHHHHHHHhC---ccCeEEEE
Confidence            998766 67 99999998873                    3456678899999999999999999997   78999999


Q ss_pred             ecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCC
Q 024553          167 ADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKG  228 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g  228 (266)
                      |+||+++|++........... ...........+|+|+|+.+++++..+...+|..+....|
T Consensus       199 v~PG~v~T~~~~~~~~~~~~~-~~~~~~~~~~~~pedvA~~v~~l~s~~~~~~g~~i~v~~~  259 (272)
T 2nwq_A          199 LEPGLCESEFSLVRFGGDQAR-YDKTYAGAHPIQPEDIAETIFWIMNQPAHLNINSLEIMPV  259 (272)
T ss_dssp             EEECSBC---------------------CCCCBCHHHHHHHHHHHHTSCTTEEEEEEEEEET
T ss_pred             EEcCCCcCcchhcccccchHH-HHHhhccCCCCCHHHHHHHHHHHhCCCccCccceEEEeec
Confidence            999999999865321100000 0000011124699999999997766555556766654444

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.94  E-value=2.5e-26  Score=190.35  Aligned_cols=189  Identities=16%  Similarity=0.189  Sum_probs=148.5

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCC--CC------cCCCcccchhhhhhhhhHHHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT--SS------RLTPEGYDQMMSTNYIGAFFLT   82 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~--~~------~~~~~~~~~~~~~n~~~~~~l~   82 (266)
                      .++.++.+|+++.++++++++++.+      .++++|+||||||+...  ..      +.+.++|++++++|+.+++.++
T Consensus        58 ~~~~~~~~D~~~~~~v~~~~~~~~~------~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~  131 (265)
T 2o23_A           58 NNCVFAPADVTSEKDVQTALALAKG------KFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVI  131 (265)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHH
T ss_pred             CceEEEEcCCCCHHHHHHHHHHHHH------HCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHH
Confidence            4689999999999999999999988      55899999999998643  22      3577889999999999999999


Q ss_pred             HhhHHHHhcC------CCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCC
Q 024553           83 KLLLPLLKNS------PVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGL  156 (266)
Q Consensus        83 ~~~~~~l~~~------~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~  156 (266)
                      +.++|.|+++      + .++||++||..+..                    +.++...|+.+|++++.++++++.++. 
T Consensus       132 ~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~--------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~-  189 (265)
T 2o23_A          132 RLVAGEMGQNEPDQGGQ-RGVIINTASVAAFE--------------------GQVGQAAYSASKGGIVGMTLPIARDLA-  189 (265)
T ss_dssp             HHHHHHHTTSCCCTTSC-CEEEEEECCTHHHH--------------------CCTTCHHHHHHHHHHHHHHHHHHHHHG-
T ss_pred             HHHHHHHHhcccccCCC-CcEEEEeCChhhcC--------------------CCCCCchhHHHHHHHHHHHHHHHHHHh-
Confidence            9999999876      4 68999999988643                    445667899999999999999999997 


Q ss_pred             CCCCCeEEEEecCCcccCCccCcchhHHHHHHHHHHHHh-hcCCCHHHHHHHHHHHhcCCCCcccceeecCCCccc
Q 024553          157 DKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL-GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  231 (266)
Q Consensus       157 ~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~  231 (266)
                        +.+|++++|+||+++|++....+.... .......++ +++.+|+++|+.+++++ .++..+|..+..++|..+
T Consensus       190 --~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~dva~~~~~l~-~~~~~~G~~i~vdgG~~~  261 (265)
T 2o23_A          190 --PIGIRVMTIAPGLFGTPLLTSLPEKVC-NFLASQVPFPSRLGDPAEYAHLVQAII-ENPFLNGEVIRLDGAIRM  261 (265)
T ss_dssp             --GGTEEEEEEEECCBCCC-----------CHHHHTCSSSCSCBCHHHHHHHHHHHH-HCTTCCSCEEEESTTCCC
T ss_pred             --hcCcEEEEEEeccccCccccccCHHHH-HHHHHcCCCcCCCCCHHHHHHHHHHHh-hcCccCceEEEECCCEec
Confidence              789999999999999998765432111 111111233 56789999999999876 345678988887777654

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.94  E-value=4.9e-26  Score=185.45  Aligned_cols=179  Identities=17%  Similarity=0.185  Sum_probs=145.3

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++.+++.++|
T Consensus        51 ~~~~~~~~~D~~~~~~v~~~~~~~~~------~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  124 (235)
T 3l77_A           51 GVEVFYHHLDVSKAESVEEFSKKVLE------RFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLD  124 (235)
T ss_dssp             CCCEEEEECCTTCHHHHHHHCC-HHH------HHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCeEEEEEeccCCHHHHHHHHHHHHH------hcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45799999999999999999999988      5589999999999873  456778999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++.  .+++|+++|..+.                    .+.+....|+++|++++.++++++.+     .++|+|++|
T Consensus       125 ~~~~~--~~~ii~~sS~~~~--------------------~~~~~~~~Y~~sKaa~~~~~~~l~~~-----~~~i~v~~v  177 (235)
T 3l77_A          125 SLKRT--GGLALVTTSDVSA--------------------RLIPYGGGYVSTKWAARALVRTFQIE-----NPDVRFFEL  177 (235)
T ss_dssp             HHHHH--TCEEEEECCGGGS--------------------SCCTTCHHHHHHHHHHHHHHHHHHHH-----CTTSEEEEE
T ss_pred             HHhhc--CCcEEEEecchhc--------------------ccCCCcchHHHHHHHHHHHHHHHhhc-----CCCeEEEEE
Confidence            99543  5789999998763                    35566778999999999999999555     579999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC-CcccceeecCCCcc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRT  230 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~-~~~G~~~~~~~g~~  230 (266)
                      +||+|+|++.........         ..++.+|+++|+.+++++..+. ...|.....+.|+.
T Consensus       178 ~PG~v~T~~~~~~~~~~~---------~~~~~~p~dva~~v~~l~~~~~~~~~~~~~~~~~~~~  232 (235)
T 3l77_A          178 RPGAVDTYFGGSKPGKPK---------EKGYLKPDEIAEAVRCLLKLPKDVRVEELMLRSVYQR  232 (235)
T ss_dssp             EECSBSSSTTTCCSCCCG---------GGTCBCHHHHHHHHHHHHTSCTTCCCCEEEECCTTSC
T ss_pred             eCCccccccccccCCccc---------ccCCCCHHHHHHHHHHHHcCCCCCccceEEEeecccC
Confidence            999999999876543211         1145699999999997665543 34677776666553

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.94  E-value=2.1e-26  Score=192.59  Aligned_cols=183  Identities=19%  Similarity=0.245  Sum_probs=145.2

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.||+++.++++++++++.+      .++++|+||||||+.  .+..+.+.++|++++++|+.|++.+++.++|.
T Consensus        51 ~~~~~~~~Dv~~~~~~~~~~~~~~~------~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~  124 (281)
T 3m1a_A           51 DRAEAISLDVTDGERIDVVAADVLA------RYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQ  124 (281)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHHHH------HHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCceEEEeeCCCHHHHHHHHHHHHH------hCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4789999999999999999999988      568999999999986  45567788999999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |++++ .++||++||..+.                    .+.++...|++||++++.++++++.++.   +.+|++++|+
T Consensus       125 ~~~~~-~~~iv~~sS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~  180 (281)
T 3m1a_A          125 MRERG-SGSVVNISSFGGQ--------------------LSFAGFSAYSATKAALEQLSEGLADEVA---PFGIKVLIVE  180 (281)
T ss_dssp             HHHHT-CEEEEEECCGGGT--------------------CCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEE
T ss_pred             HHhcC-CCEEEEEcCcccc--------------------CCCCCchHHHHHHHHHHHHHHHHHHHhh---ccCcEEEEEe
Confidence            98876 7899999998873                    3566778999999999999999999997   7899999999


Q ss_pred             CCcccCCccCcc--------hhHHHH----HHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceee
Q 024553          169 PGVVKTNIMREV--------PSFLSL----MAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFF  224 (266)
Q Consensus       169 PG~v~T~~~~~~--------~~~~~~----~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~  224 (266)
                      ||+|+|++....        ......    .......+.+++.+|+++|+++++++..+ ...+.|+.
T Consensus       181 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~-~~~~~~~l  247 (281)
T 3m1a_A          181 PGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAAIRLALDTE-KTPLRLAL  247 (281)
T ss_dssp             ECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHHHHHHHHHHSS-SCCSEEEE
T ss_pred             cCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHHHHHHHHHhCC-CCCeEEec
Confidence            999999986432        111111    11111223456779999999999665443 34444544

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.94  E-value=7.2e-26  Score=187.24  Aligned_cols=193  Identities=19%  Similarity=0.273  Sum_probs=153.7

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.+++.++++++.+      .++++|+||||||...  +..+.+.++|++++++|+.+++.+++.+++
T Consensus        56 ~~~~~~~~~D~~~~~~~~~~~~~~~~------~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  129 (261)
T 1gee_A           56 GGEAIAVKGDVTVESDVINLVQSAIK------EFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIK  129 (261)
T ss_dssp             TCEEEEEECCTTSHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCceEEEECCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHH
Confidence            34688999999999999999999988      5578999999999863  345678889999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++++..++||++||..+.                    .+.++...|+.+|++++.++++++.++.   +.+|+++.+
T Consensus       130 ~~~~~~~~~~iv~isS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v  186 (261)
T 1gee_A          130 YFVENDIKGTVINMSSVHEK--------------------IPWPLFVHYAASKGGMKLMTETLALEYA---PKGIRVNNI  186 (261)
T ss_dssp             HHHHTTCCCEEEEECCGGGT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEE
T ss_pred             HHHhCCCCCEEEEeCCHHhc--------------------CCCCCccHHHHHHHHHHHHHHHHHHHhc---ccCeEEEEE
Confidence            99875435799999998763                    3456678899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHH-HHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCccc
Q 024553          168 DPGVVKTNIMREVPSFLSL-MAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  231 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~  231 (266)
                      +||++.|++.......... .......+++++.+|+++|+.+++++... ...+|..+..++|...
T Consensus       187 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~  252 (261)
T 1gee_A          187 GPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMTL  252 (261)
T ss_dssp             EECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             eeCCcCCchhhhcccChhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCcEEEEcCCccc
Confidence            9999999986543111111 11111124466789999999999765432 3557998888887654

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.93  E-value=5e-26  Score=188.75  Aligned_cols=192  Identities=23%  Similarity=0.228  Sum_probs=135.1

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCC-CCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMH-SSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~-~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      +.++.++.+|+++.++++++++++.+      .+ +++|+||||||+..  +..+.+.++|++++++|+.+++.+++.++
T Consensus        62 ~~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~  135 (266)
T 1xq1_A           62 GFQVTGSVCDASLRPEREKLMQTVSS------MFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAH  135 (266)
T ss_dssp             TCCEEEEECCTTSHHHHHHHHHHHHH------HHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCeeEEEECCCCCHHHHHHHHHHHHH------HhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            34689999999999999999999988      44 78999999999863  45567888999999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |.|++++ .++||++||..+..                    +.+....|+.+|++++.++++++.++.   +.+|++++
T Consensus       136 ~~~~~~~-~~~iv~isS~~~~~--------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~  191 (266)
T 1xq1_A          136 PLLKASG-CGNIIFMSSIAGVV--------------------SASVGSIYSATKGALNQLARNLACEWA---SDGIRANA  191 (266)
T ss_dssp             HHHHHHS-SCEEEEEC------------------------------CCHHHHHHHHHHHHHHHHHHHHG---GGTCEEEE
T ss_pred             HHHHhcC-CcEEEEEccchhcc--------------------CCCCCchHHHHHHHHHHHHHHHHHHHh---HhCcEEEE
Confidence            9998766 78999999988632                    345567899999999999999999997   78999999


Q ss_pred             ecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCccc
Q 024553          167 ADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  231 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~  231 (266)
                      |+||++.|++.................+++++.+|+++|+.+++++... ...+|..+..++|...
T Consensus       192 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~~  257 (266)
T 1xq1_A          192 VAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITGQTICVDGGLTV  257 (266)
T ss_dssp             EECCSCC-------------------------CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCEEE
T ss_pred             EeeCCCccchhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCcEEEEcCCccc
Confidence            9999999998765321111111112235567789999999999654322 2457998888888654

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.93  E-value=3.7e-26  Score=187.52  Aligned_cols=184  Identities=16%  Similarity=0.169  Sum_probs=144.2

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      ++.++.+|+++.++++++.    +      .++++|+||||||+..  +..+.+.++|++++++|+.+++.+++.++|+|
T Consensus        51 ~~~~~~~D~~~~~~~~~~~----~------~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~  120 (246)
T 2ag5_A           51 GIQTRVLDVTKKKQIDQFA----N------EVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKM  120 (246)
T ss_dssp             TEEEEECCTTCHHHHHHHH----H------HCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             CceEEEeeCCCHHHHHHHH----H------HhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6889999999999998443    3      3578999999999863  34567888999999999999999999999999


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCC-hhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYP-CARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      ++++ .++||++||..+..                    +.+ +...|+.+|++++.++++++.++.   +.+|++++|+
T Consensus       121 ~~~~-~g~iv~isS~~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~  176 (246)
T 2ag5_A          121 LAQK-SGNIINMSSVASSV--------------------KGVVNRCVYSTTKAAVIGLTKSVAADFI---QQGIRCNCVC  176 (246)
T ss_dssp             HHHT-CEEEEEECCSBTTT--------------------BCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEE
T ss_pred             HhcC-CceEEEEechHhCc--------------------CCCCCCccHHHHHHHHHHHHHHHHHHhh---hcCcEEEEEe
Confidence            8766 78999999988632                    233 567899999999999999999997   7899999999


Q ss_pred             CCcccCCccCcchh-----HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          169 PGVVKTNIMREVPS-----FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       169 PG~v~T~~~~~~~~-----~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      ||++.|++......     ...........+++++.+|+++|+.+++++... ...+|..+..++|.
T Consensus       177 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdgG~  243 (246)
T 2ag5_A          177 PGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVTGNPVIIDGGW  243 (246)
T ss_dssp             ESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred             eCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            99999997543110     111111111225567789999999999665432 35679998877774

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.93  E-value=1.4e-25  Score=187.08  Aligned_cols=192  Identities=19%  Similarity=0.252  Sum_probs=153.9

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC----CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA----TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      ++.++.||+++.++++++++++.+      .++++|+||||||...    +..+.+.++|++++++|+.+++.+++.++|
T Consensus        65 ~~~~~~~D~~~~~~~~~~~~~~~~------~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  138 (278)
T 2bgk_A           65 VISFVHCDVTKDEDVRNLVDTTIA------KHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAAR  138 (278)
T ss_dssp             TEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             ceEEEECCCCCHHHHHHHHHHHHH------HcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            689999999999999999999988      4578999999999863    345667789999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCC-hhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYP-CARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      .|++++ .++||++||..+..                    +.+ ....|+.+|++++.++++++.++.   +.+|+++.
T Consensus       139 ~~~~~~-~~~iv~isS~~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~  194 (278)
T 2bgk_A          139 VMIPAK-KGSIVFTASISSFT--------------------AGEGVSHVYTATKHAVLGLTTSLCTELG---EYGIRVNC  194 (278)
T ss_dssp             HHGGGT-CEEEEEECCGGGTC--------------------CCTTSCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEE
T ss_pred             HHhhcC-CCeEEEEeeccccC--------------------CCCCCCcchHHHHHHHHHHHHHHHHHHh---hcCcEEEE
Confidence            998766 78999999988642                    233 567899999999999999999997   78999999


Q ss_pred             ecCCcccCCccCcchh--HHHHHHHHHH--HHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCccccC
Q 024553          167 ADPGVVKTNIMREVPS--FLSLMAFTVL--KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVNS  233 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~--~~~~~~~~~~--~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~~~  233 (266)
                      |+||++.|++......  ..........  .+.+++.+|+++|+.+++++... ...+|..+..++|..+..
T Consensus       195 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~  266 (278)
T 2bgk_A          195 VSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTN  266 (278)
T ss_dssp             EEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             EEeceecchhhhhhcccchhHHHHhhhcccccccccCCHHHHHHHHHHHcCcccccCCCCEEEECCcccccC
Confidence            9999999998765321  1111111111  12356789999999999766432 356799988888877654

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.93  E-value=1.8e-26  Score=190.32  Aligned_cols=194  Identities=18%  Similarity=0.233  Sum_probs=149.7

Q ss_pred             hcccCCCccEEEEEecCCCH-HHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHH
Q 024553            4 ITSRNKDARLEAFQVDLSSF-QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLT   82 (266)
Q Consensus         4 i~~~~~~~~~~~i~~Dls~~-~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~   82 (266)
                      +.+..++.++.++.||+++. ++++++++++.+      .++++|+||||||+.      +.++|++++++|+.|++.++
T Consensus        48 l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~------~~g~id~lv~~Ag~~------~~~~~~~~~~~N~~g~~~l~  115 (254)
T 1sby_A           48 LKAINPKVNITFHTYDVTVPVAESKKLLKKIFD------QLKTVDILINGAGIL------DDHQIERTIAINFTGLVNTT  115 (254)
T ss_dssp             HHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH------HHSCCCEEEECCCCC------CTTCHHHHHHHHTHHHHHHH
T ss_pred             HHHhCCCceEEEEEEecCCChHHHHHHHHHHHH------hcCCCCEEEECCccC------CHHHHhhhheeeehhHHHHH
Confidence            33334455789999999998 999999999988      457899999999984      46789999999999999999


Q ss_pred             HhhHHHHhcCC--CCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCC
Q 024553           83 KLLLPLLKNSP--VPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSR  160 (266)
Q Consensus        83 ~~~~~~l~~~~--~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~  160 (266)
                      +.++|.|.+++  ..++||++||..+.                    .+.+....|+.+|++++.++++++.++.   +.
T Consensus       116 ~~~~~~~~~~~~~~~g~iv~isS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~~~~---~~  172 (254)
T 1sby_A          116 TAILDFWDKRKGGPGGIIANICSVTGF--------------------NAIHQVPVYSASKAAVVSFTNSLAKLAP---IT  172 (254)
T ss_dssp             HHHHHHHCGGGTCCCEEEEEECCGGGT--------------------SCCTTSHHHHHHHHHHHHHHHHHHHHHH---HH
T ss_pred             HHHHHHHHHhcCCCCCEEEEECchhhc--------------------cCCCCchHHHHHHHHHHHHHHHHHHHhc---cC
Confidence            99999997642  14799999998873                    2456677899999999999999999985   57


Q ss_pred             CeEEEEecCCcccCCccCcchhH----HHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCC--ccccCC
Q 024553          161 HVSVIAADPGVVKTNIMREVPSF----LSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKG--RTVNSS  234 (266)
Q Consensus       161 ~i~v~~v~PG~v~T~~~~~~~~~----~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g--~~~~~~  234 (266)
                      +|++++|+||+|+|++.......    ......   .....+.+|+++|+.+++++.  ...+|.+|..++|  ..+.|.
T Consensus       173 gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~dvA~~i~~~~~--~~~~G~~~~v~gG~~~~~~~~  247 (254)
T 1sby_A          173 GVTAYSINPGITRTPLVHTFNSWLDVEPRVAEL---LLSHPTQTSEQCGQNFVKAIE--ANKNGAIWKLDLGTLEAIEWT  247 (254)
T ss_dssp             SEEEEEEEECSEESHHHHSCCCGGGSCTTHHHH---HTTSCCEEHHHHHHHHHHHHH--HCCTTCEEEEETTEEEECCCC
T ss_pred             CeEEEEEecCCccCccccccchhhhhhHHHHHH---HhcCCCCCHHHHHHHHHHHHH--cCCCCCEEEEeCCceeEeccc
Confidence            99999999999999986543110    001101   011123489999999997653  4567998887777  455554


Q ss_pred             ccc
Q 024553          235 ALS  237 (266)
Q Consensus       235 ~~~  237 (266)
                      .++
T Consensus       248 ~~~  250 (254)
T 1sby_A          248 KHW  250 (254)
T ss_dssp             CSC
T ss_pred             ccc
Confidence            443

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.93  E-value=5e-26  Score=186.65  Aligned_cols=189  Identities=20%  Similarity=0.256  Sum_probs=138.2

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.+|+++.++++++++++.+      .++++|+||||||...  +..+.+.++|++++++|+.+++.+++.++|
T Consensus        54 ~~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  127 (247)
T 2hq1_A           54 GINVVVAKGDVKNPEDVENMVKTAMD------AFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSK  127 (247)
T ss_dssp             TCCEEEEESCTTSHHHHHHHHHHHHH------HHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCCCHHHHHHHHHHHHH------hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            34689999999999999999999988      4579999999999863  345678889999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++++ .++||++||..+.                    .+.+....|+.+|++++.++++++.++.   ..+|+++.+
T Consensus       128 ~~~~~~-~~~iv~~sS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v  183 (247)
T 2hq1_A          128 IMLKQK-SGKIINITSIAGI--------------------IGNAGQANYAASKAGLIGFTKSIAKEFA---AKGIYCNAV  183 (247)
T ss_dssp             HHHHHT-CEEEEEECC-----------------------------CHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             HHHhcC-CcEEEEEcChhhc--------------------cCCCCCcHhHHHHHHHHHHHHHHHHHHH---HcCcEEEEE
Confidence            998765 6899999998752                    2445667899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      +||++.|++....+.... .......+++++.+|+++|+.+++++... ...+|..+..++|.
T Consensus       184 ~Pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  245 (247)
T 2hq1_A          184 APGIIKTDMTDVLPDKVK-EMYLNNIPLKRFGTPEEVANVVGFLASDDSNYITGQVINIDGGL  245 (247)
T ss_dssp             EECSBCCHHHHTSCHHHH-HHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             EEEEEeccchhhcchHHH-HHHHhhCCCCCCCCHHHHHHHHHHHcCcccccccCcEEEeCCCc
Confidence            999999998655432211 11111224556789999999999665432 34578888777764

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.93  E-value=3.8e-26  Score=187.02  Aligned_cols=188  Identities=22%  Similarity=0.247  Sum_probs=151.9

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.+|+++.++++++++++.+      .++++|+||||||...  +..+.+.++|++++++|+.+++.+++.++|.
T Consensus        51 ~~~~~~~~D~~~~~~~~~~~~~~~~------~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  124 (244)
T 1edo_A           51 GQAITFGGDVSKEADVEAMMKTAID------AWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKI  124 (244)
T ss_dssp             CEEEEEECCTTSHHHHHHHHHHHHH------HSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CcEEEEeCCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence            4688999999999999999999988      6689999999999874  3456778899999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |++++ .++||++||..+..                    +.+....|+.+|++++.++++++.++.   +.+|+++.++
T Consensus       125 ~~~~~-~~~iv~~sS~~~~~--------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~  180 (244)
T 1edo_A          125 MMKKR-KGRIINIASVVGLI--------------------GNIGQANYAAAKAGVIGFSKTAAREGA---SRNINVNVVC  180 (244)
T ss_dssp             HHHHT-CEEEEEECCTHHHH--------------------CCTTCHHHHHHHHHHHHHHHHHHHHHH---TTTEEEEEEE
T ss_pred             HHhcC-CCEEEEECChhhcC--------------------CCCCCccchhhHHHHHHHHHHHHHHhh---hcCCEEEEEe
Confidence            98765 78999999987632                    345567899999999999999999997   7899999999


Q ss_pred             CCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC--CcccceeecCCCc
Q 024553          169 PGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP--ETSGVYFFGGKGR  229 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~--~~~G~~~~~~~g~  229 (266)
                      ||++.|++......... .......+++++.+|+++|+.+++++..+.  ..+|..+..++|.
T Consensus       181 Pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gG~  242 (244)
T 1edo_A          181 PGFIASDMTAKLGEDME-KKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             ECSBCSHHHHTTCHHHH-HHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred             eCccccchhhhcChHHH-HHHhhcCCCCCCCCHHHHHHHHHHHhCCCccCCcCCCEEEeCCCc
Confidence            99999998765432211 111111244567899999999997653332  4578888777664

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.93  E-value=1.2e-25  Score=186.14  Aligned_cols=197  Identities=20%  Similarity=0.191  Sum_probs=153.4

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.||+++.++++++++++.+      .++++|+||||||...  +..+.+.++|++++++|+.+++.+++.+++.
T Consensus        64 ~~~~~~~~Dl~~~~~~~~~~~~~~~------~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~  137 (265)
T 1h5q_A           64 VKTKAYQCDVSNTDIVTKTIQQIDA------DLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKL  137 (265)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHH------HSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CeeEEEEeeCCCHHHHHHHHHHHHH------hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHH
Confidence            4689999999999999999999988      5689999999999863  4456788899999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |++++..++||++||..+....+..             ..+..+...|+.+|++++.++++++.++.   +.+|++++|+
T Consensus       138 ~~~~~~~~~iv~~sS~~~~~~~~~~-------------~~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~  201 (265)
T 1h5q_A          138 WLQKQQKGSIVVTSSMSSQIINQSS-------------LNGSLTQVFYNSSKAACSNLVKGLAAEWA---SAGIRVNALS  201 (265)
T ss_dssp             HHHHTCCEEEEEECCGGGTSCCEEE-------------TTEECSCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEE
T ss_pred             HHhcCCCceEEEeCCchhhcccccc-------------ccccccccccHHHHHHHHHHHHHHHHHHH---hcCcEEEEEe
Confidence            9875434899999998764321000             00122357899999999999999999997   7899999999


Q ss_pred             CCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCcc
Q 024553          169 PGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  230 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~  230 (266)
                      ||+|.|++.....+... .......+++++.+|+++|+.+++++... ...+|..+..++|..
T Consensus       202 Pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  263 (265)
T 1h5q_A          202 PGYVNTDQTAHMDKKIR-DHQASNIPLNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGGQL  263 (265)
T ss_dssp             ECSBCCGGGGGSCHHHH-HHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred             cCccccccccccchhHH-HHHHhcCcccCCCCHHHHHHHHHhhccCchhcCcCcEEEecCCEe
Confidence            99999998776432211 11112234567789999999999765432 346788888777764

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.93  E-value=2.7e-26  Score=193.75  Aligned_cols=217  Identities=18%  Similarity=0.116  Sum_probs=162.8

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.+++.+++.+++.
T Consensus        76 ~~~~~~~~Dl~~~~~~~~~~~~~~~------~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~  149 (302)
T 1w6u_A           76 NKVHAIQCDVRDPDMVQNTVSELIK------VAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQ  149 (302)
T ss_dssp             SCEEEEECCTTCHHHHHHHHHHHHH------HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEEeCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            4689999999999999999999988      5689999999999763  4456788899999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |++....++||++||..+..                    +.++...|+.+|++++.++++++.++.   ..+|++++++
T Consensus       150 ~~~~~~~~~iv~isS~~~~~--------------------~~~~~~~Y~~sK~a~~~~~~~la~~~~---~~gi~v~~v~  206 (302)
T 1w6u_A          150 LIKAQKGAAFLSITTIYAET--------------------GSGFVVPSASAKAGVEAMSKSLAAEWG---KYGMRFNVIQ  206 (302)
T ss_dssp             HHHTTCCEEEEEECCTHHHH--------------------CCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEE
T ss_pred             HHHhcCCCEEEEEccccccc--------------------CCCCcchhHHHHHHHHHHHHHHHHHhh---hcCcEEEEEe
Confidence            97433268999999987643                    445667899999999999999999997   7899999999


Q ss_pred             CCcccCC-ccCcchhHHHH-HHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCccccCCccc-cCHHHHH
Q 024553          169 PGVVKTN-IMREVPSFLSL-MAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVNSSALS-FNSKLAG  244 (266)
Q Consensus       169 PG~v~T~-~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~~~~~~~-~~~~~~~  244 (266)
                      ||++.|+ +.....+.... .......+++++.+|+++|+.+++++... ...+|..+..++|......... ...+...
T Consensus       207 Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g  286 (302)
T 1w6u_A          207 PGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTK  286 (302)
T ss_dssp             ECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCH
T ss_pred             eccCCCcchhhhcccchhhHHHHHhcCCcCCCCCHHHHHHHHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhcc
Confidence            9999998 44332221111 11111234567789999999999654322 2347998888888766544432 2234456


Q ss_pred             HHHHHHHHHhhh
Q 024553          245 ELWTTSCNLFIN  256 (266)
Q Consensus       245 ~~~~~~~~~~~~  256 (266)
                      ..|+.+++++..
T Consensus       287 ~~~~~~~~~~~~  298 (302)
T 1w6u_A          287 EQWDTIEELIRK  298 (302)
T ss_dssp             HHHHHHTTC---
T ss_pred             ccccChhhhccC
Confidence            789988877653

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.93  E-value=1.3e-25  Score=185.49  Aligned_cols=191  Identities=16%  Similarity=0.161  Sum_probs=151.1

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC---CCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      +.++.++.+|+++.++++++++++.+      .++++|+||||||+..   +..+.+.++|++++++|+.+++.+++.++
T Consensus        61 ~~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  134 (260)
T 3awd_A           61 GHDVSSVVMDVTNTESVQNAVRSVHE------QEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVG  134 (260)
T ss_dssp             TCCEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CCceEEEEecCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHH
Confidence            34689999999999999999999988      4578999999999764   34567788899999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChh--hcchHhHHHHHHHHHHHHHhhCCCCCCCeEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCA--RIYEYSKLCLLIFSYELHRNLGLDKSRHVSV  164 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v  164 (266)
                      |.|++++ .++||++||..+..                    +.+..  ..|+.+|++++.++++++.++.   +.+|++
T Consensus       135 ~~~~~~~-~~~iv~~sS~~~~~--------------------~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~---~~gi~v  190 (260)
T 3awd_A          135 RIMLEQK-QGVIVAIGSMSGLI--------------------VNRPQQQAAYNASKAGVHQYIRSLAAEWA---PHGIRA  190 (260)
T ss_dssp             HHHHHHT-CEEEEEECCGGGTS--------------------CCSSSCCHHHHHHHHHHHHHHHHHHHHHG---GGTEEE
T ss_pred             HHHhhcC-CCEEEEEecchhcc--------------------cCCCCCccccHHHHHHHHHHHHHHHHHhh---hcCeEE
Confidence            9998765 78999999987632                    22333  7899999999999999999997   789999


Q ss_pred             EEecCCcccCCccC-cchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCcc
Q 024553          165 IAADPGVVKTNIMR-EVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  230 (266)
Q Consensus       165 ~~v~PG~v~T~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~  230 (266)
                      +.|+||++.|++.. ...............+++++.+|+++|+.+++++... ...+|..+..++|..
T Consensus       191 ~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~  258 (260)
T 3awd_A          191 NAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLASDAASLMTGAIVNVDAGFT  258 (260)
T ss_dssp             EEEEECCBCCTTTHHHHTCHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             EEEEeeeeccchhhcccCChHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCchhccCCCcEEEECCcee
Confidence            99999999999875 2211111111111234567789999999999765432 355788888777653

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.93  E-value=1.1e-25  Score=188.55  Aligned_cols=189  Identities=20%  Similarity=0.288  Sum_probs=149.7

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++.+++.++|
T Consensus        92 ~~~~~~~~~Dl~d~~~v~~~~~~~~~------~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  165 (285)
T 2c07_A           92 GYESSGYAGDVSKKEEISEVINKILT------EHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISK  165 (285)
T ss_dssp             TCCEEEEECCTTCHHHHHHHHHHHHH------HCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred             CCceeEEECCCCCHHHHHHHHHHHHH------hcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            45789999999999999999999988      5689999999999863  456678889999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++++ .++||++||..+..                    +.++...|+++|++++.++++++.++.   +.+|++++|
T Consensus       166 ~~~~~~-~~~iv~isS~~~~~--------------------~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v  221 (285)
T 2c07_A          166 RMINNR-YGRIINISSIVGLT--------------------GNVGQANYSSSKAGVIGFTKSLAKELA---SRNITVNAI  221 (285)
T ss_dssp             HHHHHT-CEEEEEECCTHHHH--------------------CCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             HHHhCC-CCEEEEECChhhcc--------------------CCCCCchHHHHHHHHHHHHHHHHHHHH---HhCcEEEEE
Confidence            998765 68999999987632                    345567899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      +||++.|++.....+... .......+.+++.+|+++|+.+++++... ...+|..+..++|.
T Consensus       222 ~Pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~G~~i~v~gG~  283 (285)
T 2c07_A          222 APGFISSDMTDKISEQIK-KNIISNIPAGRMGTPEEVANLACFLSSDKSGYINGRVFVIDGGL  283 (285)
T ss_dssp             EECSBCC-----CCHHHH-HHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             EeCcEecCchhhcCHHHH-HHHHhhCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCEEEeCCCc
Confidence            999999998765432211 11111224566789999999999765432 24578888877764

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.93  E-value=5e-26  Score=186.73  Aligned_cols=175  Identities=22%  Similarity=0.205  Sum_probs=141.7

Q ss_pred             ccEEEEEecC--CCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC---CCCcCCCcccchhhhhhhhhHHHHHHhh
Q 024553           11 ARLEAFQVDL--SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLL   85 (266)
Q Consensus        11 ~~~~~i~~Dl--s~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~   85 (266)
                      ..+.++.+|+  ++.++++++++++.+      .++++|+||||||+..   +..+.+.++|++++++|+.|++.+++.+
T Consensus        64 ~~~~~~~~d~d~~~~~~~~~~~~~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~  137 (247)
T 3i1j_A           64 PQPLIIALNLENATAQQYRELAARVEH------EFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRAL  137 (247)
T ss_dssp             CCCEEEECCTTTCCHHHHHHHHHHHHH------HHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             CCceEEEeccccCCHHHHHHHHHHHHH------hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence            3566777777  999999999999998      5589999999999863   4567788999999999999999999999


Q ss_pred             HHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCC-CCeEE
Q 024553           86 LPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKS-RHVSV  164 (266)
Q Consensus        86 ~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~-~~i~v  164 (266)
                      +|+|++++ .++||++||..+.                    .+.++...|+++|++++.++++++.++.   . .+|+|
T Consensus       138 ~~~~~~~~-~~~iv~isS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~~~i~v  193 (247)
T 3i1j_A          138 LPLLKRSE-DASIAFTSSSVGR--------------------KGRANWGAYGVSKFATEGLMQTLADELE---GVTAVRA  193 (247)
T ss_dssp             HHHHTTSS-SEEEEEECCGGGT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHT---TTSSEEE
T ss_pred             HHHHHhCC-CCeEEEEcchhhc--------------------CCCCCcchhHHHHHHHHHHHHHHHHHhc---CCCCeEE
Confidence            99998876 7899999998873                    3566778999999999999999999996   4 79999


Q ss_pred             EEecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceee
Q 024553          165 IAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFF  224 (266)
Q Consensus       165 ~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~  224 (266)
                      |+|+||+|+|++.....+..         ...+..+|+|+|+.+++++.. +...+|..+.
T Consensus       194 ~~v~PG~v~t~~~~~~~~~~---------~~~~~~~p~dva~~~~~l~s~~~~~itG~~i~  245 (247)
T 3i1j_A          194 NSINPGATRTGMRAQAYPDE---------NPLNNPAPEDIMPVYLYLMGPDSTGINGQALN  245 (247)
T ss_dssp             EEEECCCCSSHHHHHHSTTS---------CGGGSCCGGGGTHHHHHHHSGGGTTCCSCEEE
T ss_pred             EEEecCcccCccchhccccc---------CccCCCCHHHHHHHHHHHhCchhccccCeeec
Confidence            99999999998754321110         012456899999999955432 2245677664

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.93  E-value=1.4e-25  Score=184.67  Aligned_cols=192  Identities=18%  Similarity=0.192  Sum_probs=152.4

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCC-CCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT-SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      .++.++.||+++.++++++++++.+      .++++|+||||||.... ..+.+.++|++++++|+.+++.+++.++|.|
T Consensus        60 ~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~  133 (255)
T 1fmc_A           60 GQAFACRCDITSEQELSALADFAIS------KLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEM  133 (255)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHH------HHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             CceEEEEcCCCCHHHHHHHHHHHHH------hcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            4688999999999999999999988      45789999999998642 2256788999999999999999999999999


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      ++.+ .++||++||..+.                    .+.++...|+.+|++++.++++++.++.   ..+|+++.++|
T Consensus       134 ~~~~-~~~iv~~sS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~~~~~~~---~~~i~v~~v~P  189 (255)
T 1fmc_A          134 EKNG-GGVILTITSMAAE--------------------NKNINMTSYASSKAAASHLVRNMAFDLG---EKNIRVNGIAP  189 (255)
T ss_dssp             HHHT-CEEEEEECCGGGT--------------------CCCTTCHHHHHHHHHHHHHHHHHHHHHH---TTTEEEEEEEE
T ss_pred             HhcC-CcEEEEEcchhhc--------------------CCCCCCcccHHHHHHHHHHHHHHHHHhh---hcCcEEEEEec
Confidence            8765 6899999998863                    2455667899999999999999999997   78999999999


Q ss_pred             CcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCcccc
Q 024553          170 GVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  232 (266)
Q Consensus       170 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~~  232 (266)
                      |++.|++.................+++++.+|+|+|+.+++++... ...+|..|..++|....
T Consensus       190 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~s  253 (255)
T 1fmc_A          190 GAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQILTVSGGGVQE  253 (255)
T ss_dssp             CSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCC
T ss_pred             ccCcchhhhhccChHHHHHHHhcCCcccCCCHHHHHHHHHHHhCCccccCCCcEEEECCceecc
Confidence            9999987654211111111112234566789999999999665432 23578888878877654

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.93  E-value=3.9e-25  Score=183.58  Aligned_cols=192  Identities=16%  Similarity=0.152  Sum_probs=148.8

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||+.      +.++|++++++|+.+++.+++.++|.|
T Consensus        57 ~~~~~~~~~D~~~~~~v~~~~~~~~~------~~g~id~lv~~Ag~~------~~~~~~~~~~~n~~~~~~~~~~~~~~~  124 (267)
T 2gdz_A           57 PQKTLFIQCDVADQQQLRDTFRKVVD------HFGRLDILVNNAGVN------NEKNWEKTLQINLVSVISGTYLGLDYM  124 (267)
T ss_dssp             GGGEEEEECCTTSHHHHHHHHHHHHH------HHSCCCEEEECCCCC------CSSSHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             CCceEEEecCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCC------ChhhHHHHHhHHHHHHHHHHHHHHHHH
Confidence            45789999999999999999999988      558999999999985      257799999999999999999999999


Q ss_pred             hcCC--CCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHH--HHhhCCCCCCCeEEE
Q 024553           90 KNSP--VPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYEL--HRNLGLDKSRHVSVI  165 (266)
Q Consensus        90 ~~~~--~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~l--a~~~~~~~~~~i~v~  165 (266)
                      ++++  ..++||++||..+..                    +.+....|+.+|++++.+++++  +.++.   +.+|++|
T Consensus       125 ~~~~~~~~g~iv~isS~~~~~--------------------~~~~~~~Y~~sK~a~~~~~~~~ala~e~~---~~gi~v~  181 (267)
T 2gdz_A          125 SKQNGGEGGIIINMSSLAGLM--------------------PVAQQPVYCASKHGIVGFTRSAALAANLM---NSGVRLN  181 (267)
T ss_dssp             CGGGTCCCEEEEEECCGGGTS--------------------CCTTCHHHHHHHHHHHHHHHHHHHHHHHH---TCCEEEE
T ss_pred             HhccCCCCCEEEEeCCccccC--------------------CCCCCchHHHHHHHHHHHHHHHHHHHHhc---cCCcEEE
Confidence            7642  258999999988732                    4556678999999999999995  57786   7899999


Q ss_pred             EecCCcccCCccCcchhHHHH-------HHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCccccCCccc
Q 024553          166 AADPGVVKTNIMREVPSFLSL-------MAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALS  237 (266)
Q Consensus       166 ~v~PG~v~T~~~~~~~~~~~~-------~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~~~~~~  237 (266)
                      +|+||++.|++..........       .......+..++.+|+|+|+.+++++.. +..+|..+..++|+......+.
T Consensus       182 ~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~-~~~~G~~~~v~gg~~~~~~~~~  259 (267)
T 2gdz_A          182 AICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIED-DALNGAIMKITTSKGIHFQDYG  259 (267)
T ss_dssp             EEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHHHC-TTCSSCEEEEETTTEEEECCCC
T ss_pred             EEecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHHHHHHHHHHHhcC-cCCCCcEEEecCCCcccccCcC
Confidence            999999999976543211100       0001111223466999999999966543 3578888887777766555543

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.93  E-value=1.3e-25  Score=190.11  Aligned_cols=186  Identities=25%  Similarity=0.376  Sum_probs=143.7

Q ss_pred             CccEEEEEecCCCH-HHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC-------------------------------
Q 024553           10 DARLEAFQVDLSSF-QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA-------------------------------   57 (266)
Q Consensus        10 ~~~~~~i~~Dls~~-~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~-------------------------------   57 (266)
                      +.++.++.||+++. ++++++++++.+      .++++|+||||||+..                               
T Consensus        61 ~~~~~~~~~Dl~~~~~~v~~~~~~~~~------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (311)
T 3o26_A           61 HENVVFHQLDVTDPIATMSSLADFIKT------HFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEA  134 (311)
T ss_dssp             CCSEEEEECCTTSCHHHHHHHHHHHHH------HHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHH
T ss_pred             CCceEEEEccCCCcHHHHHHHHHHHHH------hCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccch
Confidence            45799999999998 999999999988      5589999999999863                               


Q ss_pred             -CCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCCCCeEEEEcCCccccccccc------------CCcc-------
Q 024553           58 -TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ------------VNNE-------  117 (266)
Q Consensus        58 -~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~------------~~~~-------  117 (266)
                       +..+.+.++++++|++|+.|++.+++.++|+|++++ .++||++||..+.......            +...       
T Consensus       135 ~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (311)
T 3o26_A          135 QELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSD-SPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVN  213 (311)
T ss_dssp             HTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHH
T ss_pred             hcccccchhhhhhheeeeeehHHHHHHHhhHhhccCC-CCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHH
Confidence             223557788999999999999999999999998876 7899999998875432110            0000       


Q ss_pred             ----ccccCcccCCCC-CChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcccCCccCcchhHHHHHHHHHH
Q 024553          118 ----TITGKFFLRSKC-YPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL  192 (266)
Q Consensus       118 ----~~~~~~~~~~~~-~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  192 (266)
                          ++... .....+ .++...|++||++++.+++++++++.     +|+|++|+||+|+|++......          
T Consensus       214 ~~~~~~~~~-~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~e~~-----~i~v~~v~PG~v~T~~~~~~~~----------  277 (311)
T 3o26_A          214 MLLKDFKEN-LIETNGWPSFGAAYTTSKACLNAYTRVLANKIP-----KFQVNCVCPGLVKTEMNYGIGN----------  277 (311)
T ss_dssp             HHHHHHHTT-CTTTTTCCSSCHHHHHHHHHHHHHHHHHHHHCT-----TSEEEEECCCSBCSGGGTTCCS----------
T ss_pred             HHHhhhhcc-ccccccCcccchhhHHHHHHHHHHHHHHHhhcC-----CceEEEecCCceecCCcCCCCC----------
Confidence                00000 000112 23457899999999999999999984     4999999999999999766422          


Q ss_pred             HHhhcCCCHHHHHHHHHHHhcCCC-Ccccceee
Q 024553          193 KLLGLLQSPEKGINSVLDAALAPP-ETSGVYFF  224 (266)
Q Consensus       193 ~~~~~~~~p~~~a~~~~~~~~~~~-~~~G~~~~  224 (266)
                            .+|+++++.+++++..++ ..+|.||.
T Consensus       278 ------~~~~~~a~~~~~~~~~~~~~~~g~~~~  304 (311)
T 3o26_A          278 ------YTAEEGAEHVVRIALFPDDGPSGFFYD  304 (311)
T ss_dssp             ------BCHHHHHHHHHHHHTCCSSCCCSCEET
T ss_pred             ------CCHHHHHHHHHHHHhCCCCCCCceEec
Confidence                  389999999998887665 45677775

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.93  E-value=1.8e-25  Score=190.27  Aligned_cols=183  Identities=19%  Similarity=0.205  Sum_probs=138.1

Q ss_pred             hcccCCCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHH
Q 024553            4 ITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFL   81 (266)
Q Consensus         4 i~~~~~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l   81 (266)
                      +....++.++.++.+|+++.++++++++++.+      .++++|+||||||+.  .+..+.+.++|++++++|+.|++.+
T Consensus        52 l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l  125 (319)
T 3ioy_A           52 LEAEGSGPEVMGVQLDVASREGFKMAADEVEA------RFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNG  125 (319)
T ss_dssp             HHHHTCGGGEEEEECCTTCHHHHHHHHHHHHH------HTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred             HHhcCCCCeEEEEECCCCCHHHHHHHHHHHHH------hCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHH
Confidence            33344445899999999999999999999998      668999999999986  3556778899999999999999999


Q ss_pred             HHhhHHHHhcC-----CCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCC
Q 024553           82 TKLLLPLLKNS-----PVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGL  156 (266)
Q Consensus        82 ~~~~~~~l~~~-----~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~  156 (266)
                      ++.++|.|.++     ...|+||++||.++..                    +.+....|++||+++..++++++.++. 
T Consensus       126 ~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~--------------------~~~~~~~Y~aSKaal~~~~~~la~e~~-  184 (319)
T 3ioy_A          126 VTTFVPRMVERVKAGEQKGGHVVNTASMAAFL--------------------AAGSPGIYNTTKFAVRGLSESLHYSLL-  184 (319)
T ss_dssp             HHHHHHHHHHHHHTTSCCCCEEEEECCGGGTC--------------------CCSSSHHHHHHHHHHHHHHHHHHHHHG-
T ss_pred             HHHHHHHHHHhhhccCCCCcEEEEeccccccc--------------------CCCCCHHHHHHHHHHHHHHHHHHHHhh-
Confidence            99999999764     1268999999998743                    566678899999999999999999997 


Q ss_pred             CCCCCeEEEEecCCcccCCccCcchhHHHHHH-------HHHHHH----hhcCCCHHHHHHHHHHHhcCC
Q 024553          157 DKSRHVSVIAADPGVVKTNIMREVPSFLSLMA-------FTVLKL----LGLLQSPEKGINSVLDAALAP  215 (266)
Q Consensus       157 ~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~-------~~~~~~----~~~~~~p~~~a~~~~~~~~~~  215 (266)
                        +.+|+|++|+||+|+|++............       ......    .....+|+++|+.++.++..+
T Consensus       185 --~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~vA~~~~~al~~~  252 (319)
T 3ioy_A          185 --KYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVIGARVIEAMKAN  252 (319)
T ss_dssp             --GGTCEEEEECCCCBC-----------------------------CCGGGSSBCHHHHHHHHHHHHHTT
T ss_pred             --hcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCHHHHHHHHHHHHHcC
Confidence              789999999999999998765321111000       000000    011259999999999876554

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.93  E-value=1.4e-25  Score=184.36  Aligned_cols=193  Identities=24%  Similarity=0.299  Sum_probs=152.2

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.+|+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.+++.+++.++|.
T Consensus        54 ~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~  127 (251)
T 1zk4_A           54 DQIQFFQHDSSDEDGWTKLFDATEK------AFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQR  127 (251)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHHHH------HHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CceEEEECCCCCHHHHHHHHHHHHH------HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence            4689999999999999999999988      5578999999999863  4456788899999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |++++.+++||++||..+..                    +.+....|+.+|++++.++++++.++.. ...+|+++.++
T Consensus       128 ~~~~~~~~~iv~isS~~~~~--------------------~~~~~~~Y~~sK~a~~~~~~~~a~e~~~-~~~~i~v~~v~  186 (251)
T 1zk4_A          128 MKNKGLGASIINMSSIEGFV--------------------GDPSLGAYNASKGAVRIMSKSAALDCAL-KDYDVRVNTVH  186 (251)
T ss_dssp             HTTSSSCEEEEEECCGGGTS--------------------CCTTCHHHHHHHHHHHHHHHHHHHHHHH-TTCSEEEEEEE
T ss_pred             HHhcCCCCEEEEeCCchhcc--------------------CCCCCccchHHHHHHHHHHHHHHHHhcc-cCCCeEEEEEe
Confidence            98876228999999988632                    4556788999999999999999998631 04699999999


Q ss_pred             CCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCcc
Q 024553          169 PGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  230 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~  230 (266)
                      ||++.|++....+............+++++.+|+++|+.+++++... ...+|..+..++|..
T Consensus       187 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  249 (251)
T 1zk4_A          187 PGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATGSEFVVDGGYT  249 (251)
T ss_dssp             ECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             eCcCcchhhhhcCchhhhHHHhhcCCCCCCcCHHHHHHHHHHHcCcccccccCcEEEECCCcc
Confidence            99999998765432211110111124566789999999999765432 245788888777753

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.93  E-value=5e-25  Score=180.38  Aligned_cols=179  Identities=26%  Similarity=0.344  Sum_probs=147.4

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.+|+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.+++.+++.++|
T Consensus        57 ~~~~~~~~~D~~~~~~v~~~~~~~~~------~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  130 (244)
T 2bd0_A           57 GALTDTITADISDMADVRRLTTHIVE------RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFA  130 (244)
T ss_dssp             TCEEEEEECCTTSHHHHHHHHHHHHH------HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCeeeEEEecCCCHHHHHHHHHHHHH------hCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            45789999999999999999999998      5689999999999863  345678889999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++++ .++||++||..+.                    .+.++...|+.+|++++.++++++.++.   +.+|+++.+
T Consensus       131 ~~~~~~-~~~iv~isS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v  186 (244)
T 2bd0_A          131 LMERQH-SGHIFFITSVAAT--------------------KAFRHSSIYCMSKFGQRGLVETMRLYAR---KCNVRITDV  186 (244)
T ss_dssp             HHHHHT-CEEEEEECCGGGT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHT---TTTEEEEEE
T ss_pred             HHHhCC-CCEEEEEecchhc--------------------CCCCCCchhHHHHHHHHHHHHHHHHHhh---ccCcEEEEE
Confidence            998765 7899999998873                    2456678899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC-CcccceeecCCC
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKG  228 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~-~~~G~~~~~~~g  228 (266)
                      +||++.|++........          ..++.+|+++|+.+++++..+. ...|..+..+++
T Consensus       187 ~Pg~v~t~~~~~~~~~~----------~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~~  238 (244)
T 2bd0_A          187 QPGAVYTPMWGKVDDEM----------QALMMMPEDIAAPVVQAYLQPSRTVVEEIILRPTS  238 (244)
T ss_dssp             EECCBCSTTTCCCCSTT----------GGGSBCHHHHHHHHHHHHTSCTTEEEEEEEEEETT
T ss_pred             ECCCccchhhhhccccc----------cccCCCHHHHHHHHHHHHhCCccccchheEEeccc
Confidence            99999999876543211          1246799999999997665432 334555554443

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.93  E-value=3.7e-26  Score=192.64  Aligned_cols=177  Identities=12%  Similarity=0.084  Sum_probs=139.3

Q ss_pred             HHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC----CCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCCCCeE
Q 024553           23 FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL----ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRI   98 (266)
Q Consensus        23 ~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~i   98 (266)
                      .++++++++++.+      .++++|+||||||+.    .+..+.+.++|++++++|+.|++++++.++|+|++   .++|
T Consensus       103 ~~~v~~~~~~~~~------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~g~i  173 (297)
T 1d7o_A          103 NWTVQEAAECVRQ------DFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNP---GGAS  173 (297)
T ss_dssp             CCSHHHHHHHHHH------HHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEE
T ss_pred             HHHHHHHHHHHHH------HcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhcc---CceE
Confidence            6789999999988      558999999999974    34567788999999999999999999999999976   4799


Q ss_pred             EEEcCCcccccccccCCccccccCcccCCCCCChh-hcchHhHHHHHHHHHHHHHhhCCCCC-CCeEEEEecCCcccCCc
Q 024553           99 VNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCA-RIYEYSKLCLLIFSYELHRNLGLDKS-RHVSVIAADPGVVKTNI  176 (266)
Q Consensus        99 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~~~~~~~~~la~~~~~~~~-~~i~v~~v~PG~v~T~~  176 (266)
                      |++||..+..                    +.+.. ..|+++|++++.++++++.++.   + .+|+||+|+||+|+|++
T Consensus       174 v~isS~~~~~--------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~~gi~vn~v~PG~v~T~~  230 (297)
T 1d7o_A          174 ISLTYIASER--------------------IIPGYGGGMSSAKAALESDTRVLAFEAG---RKQNIRVNTISAGPLGSRA  230 (297)
T ss_dssp             EEEECGGGTS--------------------CCTTCTTTHHHHHHHHHHHHHHHHHHHH---HHHCCEEEEEEECCCBCCC
T ss_pred             EEEecccccc--------------------CCCCcchHHHHHHHHHHHHHHHHHHHhC---cccCcEEEEEeccccccch
Confidence            9999988632                    34444 5799999999999999999985   4 69999999999999999


Q ss_pred             cCcchhHHHH-HHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCccc
Q 024553          177 MREVPSFLSL-MAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  231 (266)
Q Consensus       177 ~~~~~~~~~~-~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~  231 (266)
                      .......... .......+++++.+|+++|+.+++++.. +...+|..+..++|...
T Consensus       231 ~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~~  287 (297)
T 1d7o_A          231 AKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNS  287 (297)
T ss_dssp             SSCCSHHHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             hhhccccHHHHHHhhccCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCcee
Confidence            7654211111 1111223556788999999999954432 23457998888888654

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.93  E-value=4.5e-25  Score=184.30  Aligned_cols=190  Identities=16%  Similarity=0.183  Sum_probs=151.0

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCC---CC-cCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT---SS-RLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~---~~-~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      .++.++.+|+++.++++++++++.+      .++++|+||||||+...   .. +.+.++|++++++|+.|++.+++.++
T Consensus        83 ~~~~~~~~Dl~~~~~~~~~~~~~~~------~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~  156 (279)
T 3ctm_A           83 VHSKAYKCNISDPKSVEETISQQEK------DFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIG  156 (279)
T ss_dssp             SCEEEEECCTTCHHHHHHHHHHHHH------HHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CcceEEEeecCCHHHHHHHHHHHHH------HhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            4689999999999999999999988      45789999999998632   33 56778899999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      +.|++++ .++||++||..+...                  ...+....|+.+|++++.++++++.++.   +.+ ++++
T Consensus       157 ~~~~~~~-~~~iv~isS~~~~~~------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~~-~v~~  213 (279)
T 3ctm_A          157 KIFKKNG-KGSLIITSSISGKIV------------------NIPQLQAPYNTAKAACTHLAKSLAIEWA---PFA-RVNT  213 (279)
T ss_dssp             HHHHHHT-CCEEEEECCCTTSCC---------------------CCHHHHHHHHHHHHHHHHHHHHHTT---TTC-EEEE
T ss_pred             HHHHhcC-CCeEEEECchHhccC------------------CCCCCcccHHHHHHHHHHHHHHHHHHhc---ccC-CEEE
Confidence            9998765 789999999886320                  0145678899999999999999999997   678 9999


Q ss_pred             ecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCcc
Q 024553          167 ADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  230 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~  230 (266)
                      |+||+++|++......... .......+++++.+|+|+|+.+++++... ...+|..+..++|..
T Consensus       214 v~Pg~v~t~~~~~~~~~~~-~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~i~vdgG~~  277 (279)
T 3ctm_A          214 ISPGYIDTDITDFASKDMK-AKWWQLTPLGREGLTQELVGGYLYLASNASTFTTGSDVVIDGGYT  277 (279)
T ss_dssp             EEECSBSSTTTSSCCHHHH-HHHHHHSTTCSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             EeccCCccccccccChHHH-HHHHHhCCccCCcCHHHHHHHHHHHhCccccCccCCEEEECCCee
Confidence            9999999998764332211 11122335567889999999999765432 356788888777753

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.93  E-value=1.8e-25  Score=194.91  Aligned_cols=208  Identities=13%  Similarity=-0.006  Sum_probs=163.3

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC---------------CCC---------------
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---------------ATS---------------   59 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~---------------~~~---------------   59 (266)
                      +.++.++.||+++.++++++++++.+      .+++||+||||||..               .+.               
T Consensus       122 g~~~~~~~~Dvtd~~~v~~~v~~i~~------~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~  195 (418)
T 4eue_A          122 GLVAKNFIEDAFSNETKDKVIKYIKD------EFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDE  195 (418)
T ss_dssp             TCCEEEEESCTTCHHHHHHHHHHHHH------TTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTE
T ss_pred             CCcEEEEEeeCCCHHHHHHHHHHHHH------HcCCCCEEEECCcccccccccccccccccccccccccccccccccccc
Confidence            45789999999999999999999999      779999999999974               122               


Q ss_pred             ------CcCCCcccchhhhhhhhhHH-HHHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCCh
Q 024553           60 ------SRLTPEGYDQMMSTNYIGAF-FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPC  132 (266)
Q Consensus        60 ------~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (266)
                            ...+.++|+.++++|..+.+ .+++.+.+.+...+ +++||++||+++..                    +.+.
T Consensus       196 ~~~~~~~~~t~e~~~~~~~vn~~~~~~~~~~~l~~~~~~~~-gg~IV~iSSi~~~~--------------------~~p~  254 (418)
T 4eue_A          196 ITLKKVSSASIEEIEETRKVMGGEDWQEWCEELLYEDCFSD-KATTIAYSYIGSPR--------------------TYKI  254 (418)
T ss_dssp             EEEEEECBCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEE-EEEEEEEECCCCGG--------------------GTTT
T ss_pred             cccccccCCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhhcC-CcEEEEEeCchhcC--------------------CCCc
Confidence                  23578889999999999988 77777776544333 68999999988633                    4555


Q ss_pred             h--hcchHhHHHHHHHHHHHHHhhCCCCC-CCeEEEEecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHH
Q 024553          133 A--RIYEYSKLCLLIFSYELHRNLGLDKS-RHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVL  209 (266)
Q Consensus       133 ~--~~Y~~sK~~~~~~~~~la~~~~~~~~-~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~  209 (266)
                      .  ..|++||+++..++++|+.+++   + .||+||+|+||+|.|++....+... ........++++..+|+++++.+.
T Consensus       255 ~~~~aY~ASKaAL~~ltrsLA~ELa---~~~GIrVN~V~PG~v~T~~s~~ip~~p-~y~~~~~~~mk~~G~~E~v~e~~~  330 (418)
T 4eue_A          255 YREGTIGIAKKDLEDKAKLINEKLN---RVIGGRAFVSVNKALVTKASAYIPTFP-LYAAILYKVMKEKNIHENCIMQIE  330 (418)
T ss_dssp             TTTSHHHHHHHHHHHHHHHHHHHHH---HHHSCEEEEEECCCCCCHHHHTSTTHH-HHHHHHHHHHHHTTCCCCHHHHHH
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHhC---CccCeEEEEEECCcCcChhhhcCCCCc-HHHHHHHHHHhhcCChHHHHHHHH
Confidence            5  8899999999999999999997   7 7999999999999999887654321 111222334556679999999999


Q ss_pred             HHhcCCCCcccceeecCCCccccCCccccCHHHHHHHHHH
Q 024553          210 DAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTT  249 (266)
Q Consensus       210 ~~~~~~~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  249 (266)
                      +++-. ...+|..+..++|..+..++|..+++.++++-+.
T Consensus       331 ~L~sd-~~~~g~~~~~D~~~~~r~d~~e~~~~~q~~~~~~  369 (418)
T 4eue_A          331 RMFSE-KIYSNEKIQFDDKGRLRMDDLELRKDVQDEVDRI  369 (418)
T ss_dssp             HHHHH-TTSSSSCCCCCTTSCEESCTTTTCHHHHHHHHHH
T ss_pred             HHhhc-cccCCCccccCCCceeeCChhhcCHHHHHHHHHH
Confidence            65443 4556888666777788889999998877654443

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.93  E-value=1.1e-25  Score=199.68  Aligned_cols=187  Identities=17%  Similarity=0.176  Sum_probs=147.8

Q ss_pred             EEEEEecCCCHHHHHHHHHHHHHhhccCCCCCC-cceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           13 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSS-IQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        13 ~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~-ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      +.++.||+++.++++++++++.+      .+++ +|+||||||+..  +..+.+.++|+++|++|+.|++++++.+++.|
T Consensus       261 ~~~~~~Dvtd~~~v~~~~~~~~~------~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~  334 (454)
T 3u0b_A          261 GTALTLDVTADDAVDKITAHVTE------HHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNG  334 (454)
T ss_dssp             CEEEECCTTSTTHHHHHHHHHHH------HSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTT
T ss_pred             CeEEEEecCCHHHHHHHHHHHHH------HcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            56899999999999999999988      5555 999999999974  45678999999999999999999999999999


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      ++++ .++||++||..+..                    +.++...|+++|+++..|+++++.++.   +.+|+||+|+|
T Consensus       335 ~~~~-~g~iV~iSS~a~~~--------------------g~~g~~~YaasKaal~~l~~~la~e~~---~~gI~vn~v~P  390 (454)
T 3u0b_A          335 TIGE-GGRVIGLSSMAGIA--------------------GNRGQTNYATTKAGMIGLAEALAPVLA---DKGITINAVAP  390 (454)
T ss_dssp             SSCT-TCEEEEECCHHHHH--------------------CCTTCHHHHHHHHHHHHHHHHHHHHHH---TTTCEEEEEEE
T ss_pred             hhcC-CCEEEEEeChHhCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHHhh---hcCcEEEEEEc
Confidence            8766 78999999988743                    556778899999999999999999997   78999999999


Q ss_pred             CcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCcc
Q 024553          170 GVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  230 (266)
Q Consensus       170 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~  230 (266)
                      |+|+|++....+..... ......++++..+|+|+|+.+++++.. +...+|..+..++|..
T Consensus       391 G~v~T~~~~~~~~~~~~-~~~~~~~l~r~g~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~  451 (454)
T 3u0b_A          391 GFIETKMTEAIPLATRE-VGRRLNSLFQGGQPVDVAELIAYFASPASNAVTGNTIRVCGQAM  451 (454)
T ss_dssp             CSBCC----------CH-HHHHSBTTSSCBCHHHHHHHHHHHHCGGGTTCCSCEEEESSSBS
T ss_pred             CcccChhhhhcchhhHH-HHHhhccccCCCCHHHHHHHHHHHhCCccCCCCCcEEEECCccc
Confidence            99999998764332211 111123455677999999999965432 2356899998877754

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.93  E-value=2.1e-25  Score=181.21  Aligned_cols=173  Identities=17%  Similarity=0.121  Sum_probs=132.8

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.+|+++.++++++++++.+         ..|+||||||+..  +..+.+.++|++++++|+.|++.+++.++|
T Consensus        46 ~~~~~~~~~D~~~~~~v~~~~~~~~~---------~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  116 (230)
T 3guy_A           46 SNNVGYRARDLASHQEVEQLFEQLDS---------IPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVK  116 (230)
T ss_dssp             SSCCCEEECCTTCHHHHHHHHHSCSS---------CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhccCeEeecCCCHHHHHHHHHHHhh---------cCCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34688999999999999999987754         3499999999863  455778899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++++  ++||++||..+.                    .+.+....|+++|+++..++++++.++.   +.+|+|++|
T Consensus       117 ~~~~~~--~~iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~v~~v  171 (230)
T 3guy_A          117 RYKDQP--VNVVMIMSTAAQ--------------------QPKAQESTYCAVKWAVKGLIESVRLELK---GKPMKIIAV  171 (230)
T ss_dssp             HHTTSC--CEEEEECCGGGT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHTT---TSSCEEEEE
T ss_pred             HHHhCC--CeEEEEeecccC--------------------CCCCCCchhHHHHHHHHHHHHHHHHHHH---hcCeEEEEE
Confidence            998865  499999998873                    3566778999999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC--Ccccceeec
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP--ETSGVYFFG  225 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~--~~~G~~~~~  225 (266)
                      +||+|+|++.......         .+.+++.+|+++|+.+++++..++  ..+|..+..
T Consensus       172 ~PG~v~t~~~~~~~~~---------~~~~~~~~~~dvA~~i~~l~~~~~~~~itg~~~~~  222 (230)
T 3guy_A          172 YPGGMATEFWETSGKS---------LDTSSFMSAEDAALMIHGALANIGNGYVSDITVNR  222 (230)
T ss_dssp             EECCC-------------------------CCCHHHHHHHHHHHCCEETTEEEEEEEEEC
T ss_pred             ECCcccChHHHhcCCC---------CCcccCCCHHHHHHHHHHHHhCcCCCCccceeecC
Confidence            9999999987654321         134467799999999996544333  235666553

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.93  E-value=3.9e-27  Score=200.22  Aligned_cols=177  Identities=15%  Similarity=0.059  Sum_probs=138.8

Q ss_pred             HHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC----CCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCCCCeE
Q 024553           23 FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL----ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRI   98 (266)
Q Consensus        23 ~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~i   98 (266)
                      .++++++++++.+      .++++|+||||||+.    .+..+.+.++|++++++|+.|++.+++.++|+|++   +|+|
T Consensus       104 ~~~v~~~~~~~~~------~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~g~I  174 (315)
T 2o2s_A          104 GYTIKEVAVKVKQ------DLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNE---GGSA  174 (315)
T ss_dssp             CCSHHHHHHHHHH------HHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEEE---EEEE
T ss_pred             HHHHHHHHHHHHH------hcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhc---CCEE
Confidence            6689999999988      558999999999975    34567788999999999999999999999999976   4799


Q ss_pred             EEEcCCcccccccccCCccccccCcccCCCCCChh-hcchHhHHHHHHHHHHHHHhhCCCCC-CCeEEEEecCCcccCCc
Q 024553           99 VNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCA-RIYEYSKLCLLIFSYELHRNLGLDKS-RHVSVIAADPGVVKTNI  176 (266)
Q Consensus        99 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~~~~~~~~~la~~~~~~~~-~~i~v~~v~PG~v~T~~  176 (266)
                      |++||..+..                    +.++. ..|+++|+++..++++++.++.   + .+|+||+|+||+|+|++
T Consensus       175 v~isS~~~~~--------------------~~~~~~~~Y~asKaal~~l~~~la~el~---~~~gIrvn~v~PG~v~T~~  231 (315)
T 2o2s_A          175 VTLSYLAAER--------------------VVPGYGGGMSSAKAALESDTRTLAWEAG---QKYGVRVNAISAGPLKSRA  231 (315)
T ss_dssp             EEEEEGGGTS--------------------CCTTCCTTHHHHHHHHHHHHHHHHHHHH---HHTCCEEEEEEECCCCCHH
T ss_pred             EEEecccccc--------------------cCCCccHHHHHHHHHHHHHHHHHHHHhC---cccCeEEEEEecccccchh
Confidence            9999988632                    34444 4799999999999999999985   4 79999999999999997


Q ss_pred             cCcchh-----H-HHH-HHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCccc
Q 024553          177 MREVPS-----F-LSL-MAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  231 (266)
Q Consensus       177 ~~~~~~-----~-~~~-~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~  231 (266)
                      ......     . ... .......+++++.+|+++|+.+++++.. +...+|.++..++|...
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  294 (315)
T 2o2s_A          232 ASAIGKSGEKSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLHA  294 (315)
T ss_dssp             HHHTTCSSSSCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             hhhccccccchhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCeee
Confidence            543220     0 011 1111223567788999999999954432 13558999988888654

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.93  E-value=2e-25  Score=204.39  Aligned_cols=198  Identities=20%  Similarity=0.201  Sum_probs=150.8

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++..+.+|++  ++++++++++.+      .+++||+||||||+..  ++.+++.++|+++|++|+.|++++++.++|
T Consensus       368 g~~~~~~~~Dv~--~~~~~~~~~~~~------~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p  439 (604)
T 2et6_A          368 GGEAWPDQHDVA--KDSEAIIKNVID------KYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWP  439 (604)
T ss_dssp             TCEEEEECCCHH--HHHHHHHHHHHH------HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCeEEEEEcChH--HHHHHHHHHHHH------hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            346788888884  556778888887      5689999999999873  566889999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++++ .|+||++||.++..                    +.++...|++||+++..|+++|+.+++   ++||+||+|
T Consensus       440 ~m~~~~-~G~IVnisS~ag~~--------------------~~~~~~~Y~asKaal~~lt~~la~El~---~~gIrVn~v  495 (604)
T 2et6_A          440 YFVEKQ-FGRIINITSTSGIY--------------------GNFGQANYSSSKAGILGLSKTMAIEGA---KNNIKVNIV  495 (604)
T ss_dssp             HHHHTT-CEEEEEECCHHHHS--------------------CCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             HHHHcC-CCEEEEECChhhcc--------------------CCCCChhHHHHHHHHHHHHHHHHHHhC---ccCeEEEEE
Confidence            998876 79999999988732                    456678899999999999999999998   889999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCC--cccceeecCCCcccc----------CCc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPE--TSGVYFFGGKGRTVN----------SSA  235 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~--~~G~~~~~~~g~~~~----------~~~  235 (266)
                      +||. .|++.....+.          ......+|+++|..+++  +.++.  .+|..+..++|....          ...
T Consensus       496 ~PG~-~T~m~~~~~~~----------~~~~~~~pe~vA~~v~~--L~s~~~~itG~~~~vdGG~~~~~~~~~~~~~~~~~  562 (604)
T 2et6_A          496 APHA-ETAMTLSIMRE----------QDKNLYHADQVAPLLVY--LGTDDVPVTGETFEIGGGWIGNTRWQRAKGAVSHD  562 (604)
T ss_dssp             EECC-CCCC-------------------CCSSCGGGTHHHHHH--TTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCS
T ss_pred             cCCC-CCccccccCch----------hhccCCCHHHHHHHHHH--HhCCccCCCCcEEEECCCeeEeeeeeccccccCCC
Confidence            9995 99986542111          01234599999999994  44432  589988888775431          111


Q ss_pred             cccCHHHHHHHHHHHHH
Q 024553          236 LSFNSKLAGELWTTSCN  252 (266)
Q Consensus       236 ~~~~~~~~~~~~~~~~~  252 (266)
                      ...+++.....|+...+
T Consensus       563 ~~~~~~~~~~~~~~i~~  579 (604)
T 2et6_A          563 EHTTVEFIKEHLNEITD  579 (604)
T ss_dssp             SSCCHHHHHHHHHHHTC
T ss_pred             CCCCHHHHHHHHHHHhc
Confidence            22456666666765433

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.92  E-value=3.1e-25  Score=181.93  Aligned_cols=188  Identities=24%  Similarity=0.301  Sum_probs=151.1

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.+|+++.++++++++++.+      .++++|+||||||...  +..+.+.++|++.+++|+.+++.+++.++|
T Consensus        56 ~~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  129 (248)
T 2pnf_A           56 GVKAHGVEMNLLSEESINKAFEEIYN------LVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLR  129 (248)
T ss_dssp             CCCEEEEECCTTCHHHHHHHHHHHHH------HSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCH
T ss_pred             CCceEEEEccCCCHHHHHHHHHHHHH------hcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            34689999999999999999999988      5689999999999864  345677889999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++++ .++||++||..+..                    +.++...|+.+|++++.++++++.++.   ..+|+++.+
T Consensus       130 ~~~~~~-~~~iv~~sS~~~~~--------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~~i~v~~v  185 (248)
T 2pnf_A          130 KMIKQR-WGRIVNISSVVGFT--------------------GNVGQVNYSTTKAGLIGFTKSLAKELA---PRNVLVNAV  185 (248)
T ss_dssp             HHHHHT-CEEEEEECCHHHHH--------------------CCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             HHHhcC-CcEEEEEccHHhcC--------------------CCCCCchHHHHHHHHHHHHHHHHHHhc---ccCeEEEEE
Confidence            998765 68999999987532                    344567899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCC
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKG  228 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g  228 (266)
                      +||++.|++......... .......+.+++.+|+++|+.+++++... ...+|..|..++|
T Consensus       186 ~Pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  246 (248)
T 2pnf_A          186 APGFIETDMTAVLSEEIK-QKYKEQIPLGRFGSPEEVANVVLFLCSELASYITGEVIHVNGG  246 (248)
T ss_dssp             EECSBCCGGGGGSCHHHH-HHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             EeceecCchhhhccHHHH-HHHHhcCCCCCccCHHHHHHHHHHHhCchhhcCCCcEEEeCCC
Confidence            999999998765432211 11111224456789999999999766442 3457888876665

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.92  E-value=4.4e-25  Score=188.42  Aligned_cols=182  Identities=22%  Similarity=0.260  Sum_probs=138.1

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.        .+++|+||||||+.  .+..+.+.++|++++++|+.|++.+++.++|
T Consensus        56 ~~~~~~~~~Dv~d~~~v~~~~~~~~--------~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p  127 (327)
T 1jtv_A           56 PGSLETLQLDVRDSKSVAAARERVT--------EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLP  127 (327)
T ss_dssp             TTSEEEEECCTTCHHHHHHHHHTCT--------TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCceEEEEecCCCHHHHHHHHHHHh--------cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            3578999999999999999998873        37899999999986  3455778899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++++ .++||++||..+.                    .+.+....|++||++++.++++++.++.   +.+|+|++|
T Consensus       128 ~m~~~~-~g~IV~isS~~~~--------------------~~~~~~~~Y~aSK~a~~~~~~~la~el~---~~gI~v~~v  183 (327)
T 1jtv_A          128 DMKRRG-SGRVLVTGSVGGL--------------------MGLPFNDVYCASKFALEGLCESLAVLLL---PFGVHLSLI  183 (327)
T ss_dssp             HHHHHT-CEEEEEEEEGGGT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             HHHhcC-CCEEEEECCcccc--------------------cCCCCChHHHHHHHHHHHHHHHHHHHhh---hcCcEEEEE
Confidence            998765 7899999998873                    2455677899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhH-----------HH-HH-HHH--HHHHhhcC-CCHHHHHHHHHHHhcCCCCcccceee
Q 024553          168 DPGVVKTNIMREVPSF-----------LS-LM-AFT--VLKLLGLL-QSPEKGINSVLDAALAPPETSGVYFF  224 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~-----------~~-~~-~~~--~~~~~~~~-~~p~~~a~~~~~~~~~~~~~~G~~~~  224 (266)
                      +||+|+|++.......           .. .. ...  ...+++++ .+|+++|+.+++++..+. ....|+.
T Consensus       184 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~l~~~~~-~~~~~~t  255 (327)
T 1jtv_A          184 ECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFLTALRAPK-PTLRYFT  255 (327)
T ss_dssp             EECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHHHHHHHHHCSS-CCSEEES
T ss_pred             EeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHcCCC-CCeEEEe
Confidence            9999999997653210           00 00 000  01123333 599999999997665432 2344543

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.92  E-value=1.8e-25  Score=184.29  Aligned_cols=178  Identities=17%  Similarity=0.184  Sum_probs=142.0

Q ss_pred             CHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC---CCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCCCCeE
Q 024553           22 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRI   98 (266)
Q Consensus        22 ~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~i   98 (266)
                      +.++++++++++.+      .++++|+||||||+.   .+..+.+.++|++++++|+.|++.+++.++|+|++++ .++|
T Consensus        55 d~~~v~~~~~~~~~------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~i  127 (254)
T 1zmt_A           55 SEQEPAELIEAVTS------AYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHI  127 (254)
T ss_dssp             CCCSHHHHHHHHHH------HHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEE
T ss_pred             CHHHHHHHHHHHHH------HhCCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEE
Confidence            66778888888887      458999999999986   2456778899999999999999999999999998766 7899


Q ss_pred             EEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcc------
Q 024553           99 VNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVV------  172 (266)
Q Consensus        99 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v------  172 (266)
                      |++||..+.                    .+.+....|+++|++++.++++++.++.   +.+|+||+|+||+|      
T Consensus       128 v~isS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~~~~~~  184 (254)
T 1zmt_A          128 IFITSATPF--------------------GPWKELSTYTSARAGACTLANALSKELG---EYNIPVFAIGPNYLHSEDSP  184 (254)
T ss_dssp             EEECCSTTT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCCEEEEEESSBCCBTCC
T ss_pred             EEECCcccc--------------------cCCCCchHHHHHHHHHHHHHHHHHHHhh---hcCcEEEEEecCcccccccc
Confidence            999998873                    2456678899999999999999999997   78999999999999      


Q ss_pred             ---cCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCccc
Q 024553          173 ---KTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  231 (266)
Q Consensus       173 ---~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~  231 (266)
                         +|++....+...  .......+++++.+|+++|+.+++++... ...+|.++..++|...
T Consensus       185 ~~~~T~~~~~~~~~~--~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~  245 (254)
T 1zmt_A          185 YFYPTEPWKTNPEHV--AHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQVFWLAGGFPM  245 (254)
T ss_dssp             SSCBHHHHTTCHHHH--HHHHHHSSSSSCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTTCCC
T ss_pred             ccCCCcccccChHHH--HHHhccCCCCCCcCHHHHHHHHHHHhCcccCCccCCEEEECCCchh
Confidence               777655432111  11122235567889999999999655432 2458999988877543

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.92  E-value=9.2e-27  Score=198.28  Aligned_cols=177  Identities=14%  Similarity=0.080  Sum_probs=117.2

Q ss_pred             HHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC----CCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCCCCeE
Q 024553           23 FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL----ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRI   98 (266)
Q Consensus        23 ~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~i   98 (266)
                      .++++++++++.+      .++++|+||||||+.    .+..+.+.++|++++++|+.|++++++.++|+|++   .|+|
T Consensus       117 ~~~v~~~~~~~~~------~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~g~I  187 (319)
T 2ptg_A          117 GFTISEVAEAVRA------DVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMKE---GGSA  187 (319)
T ss_dssp             CCSHHHHHHHHHH------HHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEE
T ss_pred             HHHHHHHHHHHHH------HcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHhc---CceE
Confidence            4589999999988      558999999999975    34567788999999999999999999999999976   4799


Q ss_pred             EEEcCCcccccccccCCccccccCcccCCCCCChh-hcchHhHHHHHHHHHHHHHhhCCCCC-CCeEEEEecCCcccCCc
Q 024553           99 VNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCA-RIYEYSKLCLLIFSYELHRNLGLDKS-RHVSVIAADPGVVKTNI  176 (266)
Q Consensus        99 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~~~~~~~~~la~~~~~~~~-~~i~v~~v~PG~v~T~~  176 (266)
                      |++||..+..                    +.+.. ..|+++|+++..++++++.++.   + .+|+||+|+||+|+|++
T Consensus       188 v~isS~~~~~--------------------~~~~~~~~Y~asKaal~~l~~~la~el~---~~~gIrvn~v~PG~v~T~~  244 (319)
T 2ptg_A          188 LALSYIASEK--------------------VIPGYGGGMSSAKAALESDCRTLAFEAG---RARAVRVNCISAGPLKSRA  244 (319)
T ss_dssp             EEEEECC--------------------------------------THHHHHHHHHHHH---HHHCCEEEEEEECCCC---
T ss_pred             EEEecccccc--------------------ccCccchhhHHHHHHHHHHHHHHHHHhc---cccCeeEEEEeeCCccChh
Confidence            9999988632                    34454 5799999999999999999985   4 69999999999999998


Q ss_pred             cCcchhHH------HH-HHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCccc
Q 024553          177 MREVPSFL------SL-MAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  231 (266)
Q Consensus       177 ~~~~~~~~------~~-~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~  231 (266)
                      ........      .. .......+++++.+|+++|+.+++++.. +...+|..+..++|..+
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~  307 (319)
T 2ptg_A          245 ASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGLHA  307 (319)
T ss_dssp             ----------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCTT
T ss_pred             hhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCcee
Confidence            76532100      00 0011224667788999999999954432 23568999988888644

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.92  E-value=2.4e-25  Score=182.32  Aligned_cols=187  Identities=22%  Similarity=0.271  Sum_probs=149.6

Q ss_pred             cEEE-EEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           12 RLEA-FQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        12 ~~~~-i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      ++.+ +.+|+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.+++.+++.++|.
T Consensus        52 ~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~  125 (245)
T 2ph3_A           52 PLVAVLGANLLEAEAATALVHQAAE------VLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKL  125 (245)
T ss_dssp             SCEEEEECCTTSHHHHHHHHHHHHH------HHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             ceEEEEeccCCCHHHHHHHHHHHHH------hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHH
Confidence            4566 99999999999999999988      4578999999999864  3456788899999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |++++ .++||++||..+..                    +.++...|+.+|++++.++++++.++.   ..+|+++.++
T Consensus       126 ~~~~~-~~~iv~~sS~~~~~--------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~  181 (245)
T 2ph3_A          126 MMKAR-FGRIVNITSVVGIL--------------------GNPGQANYVASKAGLIGFTRAVAKEYA---QRGITVNAVA  181 (245)
T ss_dssp             HHHHT-CEEEEEECCTHHHH--------------------CCSSBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEE
T ss_pred             HHhcC-CCEEEEEeChhhcc--------------------CCCCCcchHHHHHHHHHHHHHHHHHHH---HcCeEEEEEE
Confidence            98765 68999999987632                    345567899999999999999999997   7899999999


Q ss_pred             CCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          169 PGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      ||++.|++.....+... .......+.+++.+|+++|+.+++++... ...+|.++..++|.
T Consensus       182 Pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  242 (245)
T 2ph3_A          182 PGFIETEMTERLPQEVK-EAYLKQIPAGRFGRPEEVAEAVAFLVSEKAGYITGQTLCVDGGL  242 (245)
T ss_dssp             ECSBCCHHHHTSCHHHH-HHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             EEeecCcchhhcCHHHH-HHHHhcCCCCCCcCHHHHHHHHHHHhCcccccccCCEEEECCCC
Confidence            99999998765432211 11111224456789999999999655432 24578888876664

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.92  E-value=9.7e-25  Score=179.68  Aligned_cols=187  Identities=18%  Similarity=0.198  Sum_probs=148.2

Q ss_pred             cE-EEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           12 RL-EAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        12 ~~-~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      ++ .++.+|+++.++++++++++.+ +      +++|+||||||+..  +..+.+.++|++++++|+.|++.+++.++|.
T Consensus        58 ~~~~~~~~D~~~~~~~~~~~~~~~~-~------~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~  130 (254)
T 2wsb_A           58 AVAARIVADVTDAEAMTAAAAEAEA-V------APVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRA  130 (254)
T ss_dssp             GEEEEEECCTTCHHHHHHHHHHHHH-H------SCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             cceeEEEEecCCHHHHHHHHHHHHh-h------CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            45 8999999999999999999876 3      68999999999863  4456678889999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChh--hcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCA--RIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |++++ .++||++||..+..                    +.+..  ..|+.+|++++.++++++.++.   +.+|+++.
T Consensus       131 ~~~~~-~~~iv~isS~~~~~--------------------~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~---~~gi~v~~  186 (254)
T 2wsb_A          131 MVARG-AGAIVNLGSMSGTI--------------------VNRPQFASSYMASKGAVHQLTRALAAEWA---GRGVRVNA  186 (254)
T ss_dssp             HHHHT-CEEEEEECCGGGTS--------------------CCSSSCBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEE
T ss_pred             HHhcC-CcEEEEEecchhcc--------------------CCCCCcchHHHHHHHHHHHHHHHHHHHHh---hcCeEEEE
Confidence            98766 78999999988632                    22333  7899999999999999999997   78999999


Q ss_pred             ecCCcccCCccCcchhH-HHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          167 ADPGVVKTNIMREVPSF-LSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      ++||++.|++....... ..........+++++.+|+++|+.+++++... ...+|..+..++|.
T Consensus       187 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  251 (254)
T 2wsb_A          187 LAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLASPAASYVTGAILAVDGGY  251 (254)
T ss_dssp             EEECCBCSHHHHHHHTCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             EEecccCchhhhccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccccccCCEEEECCCE
Confidence            99999999986543211 11111111224566789999999999765432 34679988877764

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.92  E-value=1.7e-25  Score=185.16  Aligned_cols=192  Identities=20%  Similarity=0.249  Sum_probs=147.3

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCc-ceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSI-QLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~l-d~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      .++.++.+|+++.++++++++++.+      .++++ |+||||||...  +..+.+.++|++++++|+.|++.+++.++|
T Consensus        63 ~~~~~~~~D~~~~~~~~~~~~~~~~------~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  136 (264)
T 2pd6_A           63 GNHAAFQADVSEARAARCLLEQVQA------CFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQ  136 (264)
T ss_dssp             -CCEEEECCTTSHHHHHHHHHHHHH------HHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cceEEEEecCCCHHHHHHHHHHHHH------HhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHH
Confidence            5688999999999999999999988      45788 99999999874  345678889999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++++..++||++||..+..                    +.++...|+.+|++++.++++++.++.   +.+|+++++
T Consensus       137 ~~~~~~~~g~iv~isS~~~~~--------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v  193 (264)
T 2pd6_A          137 ALVSNGCRGSIINISSIVGKV--------------------GNVGQTNYAASKAGVIGLTQTAARELG---RHGIRCNSV  193 (264)
T ss_dssp             HHHHHTCCEEEEEECCTHHHH--------------------CCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             HHHhcCCCceEEEECChhhcc--------------------CCCCChhhHHHHHHHHHHHHHHHHHhh---hcCeEEEEE
Confidence            998643247999999987632                    445678899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCcccc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  232 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~~  232 (266)
                      +||++.|++.....+... .......+++++.+|+++|+.+++++... ...+|..+..++|..+.
T Consensus       194 ~Pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~  258 (264)
T 2pd6_A          194 LPGFIATPMTQKVPQKVV-DKITEMIPMGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGGLFMA  258 (264)
T ss_dssp             EECSBCSCC-----------CTGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC---
T ss_pred             eeecccccchhhcCHHHH-HHHHHhCCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCceec
Confidence            999999998764322110 00011123456779999999999765432 34678888877776554

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.92  E-value=2.1e-24  Score=176.93  Aligned_cols=181  Identities=23%  Similarity=0.298  Sum_probs=136.8

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCC--CcceeeEcCCCCC---CCCcCCCcccchhhhhhhhhHHHHHHh
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHS--SIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKL   84 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~--~ld~lv~nAG~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~   84 (266)
                      +.++.++.+|+++.++++++++++.+      .++  ++|+||||||+..   +..+.+.+++++++++|+.+++.+++.
T Consensus        50 ~~~~~~~~~D~~~~~~~~~~~~~~~~------~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~  123 (250)
T 1yo6_A           50 DSRVHVLPLTVTCDKSLDTFVSKVGE------IVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQK  123 (250)
T ss_dssp             CTTEEEEECCTTCHHHHHHHHHHHHH------HHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             CCceEEEEeecCCHHHHHHHHHHHHH------hcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHH
Confidence            45789999999999999999999988      445  8999999999864   345667888999999999999999999


Q ss_pred             hHHHHhcC------CC----CCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhh
Q 024553           85 LLPLLKNS------PV----PSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNL  154 (266)
Q Consensus        85 ~~~~l~~~------~~----~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~  154 (266)
                      +++.|+++      +.    .++||++||..+....+..             ....++...|+.+|++++.++++++.++
T Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-------------~~~~~~~~~Y~~sK~a~~~~~~~la~e~  190 (250)
T 1yo6_A          124 LLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTS-------------GSAQFPVLAYRMSKAAINMFGRTLAVDL  190 (250)
T ss_dssp             THHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCS-------------TTSSSCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHhhcccccCCCcccCCCcEEEEeccCccccCCccc-------------ccccCCccHHHHHHHHHHHHHHHHHHHh
Confidence            99999764      21    4799999998864321000             0011456789999999999999999999


Q ss_pred             CCCCCCCeEEEEecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC-CcccceeecCCC
Q 024553          155 GLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKG  228 (266)
Q Consensus       155 ~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~-~~~G~~~~~~~g  228 (266)
                      .   +.+|++++|+||+|+|++....                .+.+|+++|+.+++++.... ..+|.|+..++|
T Consensus       191 ~---~~gi~v~~v~Pg~v~t~~~~~~----------------~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~  246 (250)
T 1yo6_A          191 K---DDNVLVVNFCPGWVQTNLGGKN----------------AALTVEQSTAELISSFNKLDNSHNGRFFMRNLK  246 (250)
T ss_dssp             G---GGTCEEEEEECCCC-----------------------------HHHHHHHHHHHTTCCGGGTTCEEETTEE
T ss_pred             c---cCCeEEEEEcCCceecCCCCCC----------------CCCCHHHHHHHHHHHHhcccccCCCeEEEECCc
Confidence            7   7899999999999999986531                23489999999998776554 458999875543

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.92  E-value=5.9e-25  Score=185.67  Aligned_cols=192  Identities=17%  Similarity=0.192  Sum_probs=149.8

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||...  +..+.+.++|++++++|+.|++.+++.++|
T Consensus        71 ~~~~~~~~~D~~~~~~v~~~~~~~~~------~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  144 (303)
T 1yxm_A           71 QARVIPIQCNIRNEEEVNNLVKSTLD------TFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYS  144 (303)
T ss_dssp             CCCEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CccEEEEecCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            45799999999999999999999988      4579999999999763  445677889999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .+.+.+ .++||++||.. .                    .+.+....|+++|+++..++++++.++.   ..+|++++|
T Consensus       145 ~~~~~~-~~~iv~isS~~-~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v  199 (303)
T 1yxm_A          145 SWMKEH-GGSIVNIIVPT-K--------------------AGFPLAVHSGAARAGVYNLTKSLALEWA---CSGIRINCV  199 (303)
T ss_dssp             HTHHHH-CEEEEEECCCC-T--------------------TCCTTCHHHHHHHHHHHHHHHHHHHHTG---GGTEEEEEE
T ss_pred             HHHHhc-CCeEEEEEeec-c--------------------cCCCcchhhHHHHHHHHHHHHHHHHHhc---ccCeEEEEE
Confidence            655443 68999999986 2                    1455667899999999999999999997   789999999


Q ss_pred             cCCcccCCcc-Ccchh--HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCcccc
Q 024553          168 DPGVVKTNIM-REVPS--FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  232 (266)
Q Consensus       168 ~PG~v~T~~~-~~~~~--~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~~  232 (266)
                      +||+|.|++. .....  ...........+.+++.+|+++|+.+++++... ...+|.++..++|....
T Consensus       200 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~gG~~~~  268 (303)
T 1yxm_A          200 APGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSLY  268 (303)
T ss_dssp             EECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             ecCCcccchhhhhccccchHHHHHHHhcCcccCCCCHHHHHHHHHHHhCcccccCCCcEEEECCCeecc
Confidence            9999999952 22211  000000111124456789999999999765432 34679999888887654

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.92  E-value=2.5e-24  Score=183.43  Aligned_cols=178  Identities=16%  Similarity=0.233  Sum_probs=136.6

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.+|+++.++++++++++.+      .++++|+||||||+.  ++..+.+.++|++++++|+.|++.+++.++|
T Consensus        58 ~~~~~~~~~Dvtd~~~v~~~~~~~~~------~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp  131 (324)
T 3u9l_A           58 DVDLRTLELDVQSQVSVDRAIDQIIG------EDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALP  131 (324)
T ss_dssp             TCCEEEEECCTTCHHHHHHHHHHHHH------HHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCcEEEEEeecCCHHHHHHHHHHHHH------HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            35789999999999999999999998      568999999999986  3566788999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++++ .|+||++||..+..                   ...+....|++||++++.++++++.++.   +.+|+|++|
T Consensus       132 ~m~~~~-~g~iV~isS~~~~~-------------------~~~~~~~~Y~asKaa~~~~~~~la~el~---~~gI~v~~v  188 (324)
T 3u9l_A          132 HMRRQK-HGLLIWISSSSSAG-------------------GTPPYLAPYFAAKAAMDAIAVQYARELS---RWGIETSII  188 (324)
T ss_dssp             HHHHHT-CEEEEEECCGGGTS-------------------CCCSSCHHHHHHHHHHHHHHHHHHHHHH---TTTEEEEEE
T ss_pred             HHHhcC-CCEEEEEecchhcc-------------------CCCCcchhHHHHHHHHHHHHHHHHHHhh---hhCcEEEEE
Confidence            998876 79999999988632                   2345567899999999999999999997   789999999


Q ss_pred             cCCcccCCccCcc----hh-HHHHHHHH----------HHHHhh----cCCCHHHHHHHHHHHhcCCC
Q 024553          168 DPGVVKTNIMREV----PS-FLSLMAFT----------VLKLLG----LLQSPEKGINSVLDAALAPP  216 (266)
Q Consensus       168 ~PG~v~T~~~~~~----~~-~~~~~~~~----------~~~~~~----~~~~p~~~a~~~~~~~~~~~  216 (266)
                      +||++.|++....    +. ......+.          ......    ...+|+++|++++.++..+.
T Consensus       189 ~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~~vA~aiv~~~~~~~  256 (324)
T 3u9l_A          189 VPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAAIVPPDADVSLVADAIVRVVGTAS  256 (324)
T ss_dssp             EECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHHHTSCTTCCTHHHHHHHHHHHTSCT
T ss_pred             ECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCC
Confidence            9999987653211    11 00000000          001111    12589999999998776654

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.92  E-value=2e-24  Score=176.36  Aligned_cols=189  Identities=17%  Similarity=0.192  Sum_probs=149.2

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCc----ccchhhhhhhhhHHHHHHhh
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPE----GYDQMMSTNYIGAFFLTKLL   85 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~----~~~~~~~~n~~~~~~l~~~~   85 (266)
                      ++.++.+|+++.++++++++++ +      .++++|++|||||...  +..+.+.+    +|++++++|+.+++.+++.+
T Consensus        40 ~~~~~~~D~~~~~~~~~~~~~~-~------~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~  112 (242)
T 1uay_A           40 DLIYVEGDVTREEDVRRAVARA-Q------EEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLA  112 (242)
T ss_dssp             SSEEEECCTTCHHHHHHHHHHH-H------HHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             ceEEEeCCCCCHHHHHHHHHHH-H------hhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHH
Confidence            4578999999999999999999 6      4578999999999863  23344444    89999999999999999999


Q ss_pred             HHHHhcCC-----CCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCC
Q 024553           86 LPLLKNSP-----VPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSR  160 (266)
Q Consensus        86 ~~~l~~~~-----~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~  160 (266)
                      ++.|++++     ..++||++||..+..                    +.++...|+.+|++++.++++++.++.   +.
T Consensus       113 ~~~~~~~~~~~~~~~~~iv~~sS~~~~~--------------------~~~~~~~Y~~sK~a~~~~~~~l~~e~~---~~  169 (242)
T 1uay_A          113 AWAMRENPPDAEGQRGVIVNTASVAAFE--------------------GQIGQAAYAASKGGVVALTLPAARELA---GW  169 (242)
T ss_dssp             HHHHTTCCCCTTSCSEEEEEECCTHHHH--------------------CCTTCHHHHHHHHHHHHHHHHHHHHHG---GG
T ss_pred             HHHHHhcCCCCCCCCeEEEEeCChhhcc--------------------CCCCCchhhHHHHHHHHHHHHHHHHHh---hc
Confidence            99998753     134999999988643                    345567899999999999999999997   78


Q ss_pred             CeEEEEecCCcccCCccCcchhHHHHHHHHHHHHh-hcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          161 HVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL-GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       161 ~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      +|+++.|+||++.|++......... .......++ +++.+|+++|+.+++++.. +..+|..+..++|..+.
T Consensus       170 gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~dva~~~~~l~~~-~~~~G~~~~v~gG~~~~  240 (242)
T 1uay_A          170 GIRVVTVAPGLFDTPLLQGLPEKAK-ASLAAQVPFPPRLGRPEEYAALVLHILEN-PMLNGEVVRLDGALRMA  240 (242)
T ss_dssp             TEEEEEEEECSCSSHHHHTSCHHHH-HHHHTTCCSSCSCCCHHHHHHHHHHHHHC-TTCCSCEEEESTTCCCC
T ss_pred             CcEEEEEEeccCcchhhhccchhHH-HHHHhhCCCcccCCCHHHHHHHHHHHhcC-CCCCCcEEEEcCCeecC
Confidence            9999999999999998765433211 111111233 5678999999999976655 56789988878876553

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.91  E-value=1.2e-24  Score=178.97  Aligned_cols=182  Identities=18%  Similarity=0.168  Sum_probs=141.5

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      .+.++ ||+  .++++++++++          .++|+||||||+..  +..+.+.++|++++++|+.|++.+++.++|.|
T Consensus        61 ~~~~~-~D~--~~~~~~~~~~~----------~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~  127 (249)
T 1o5i_A           61 HRYVV-CDL--RKDLDLLFEKV----------KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAM  127 (249)
T ss_dssp             SEEEE-CCT--TTCHHHHHHHS----------CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             CeEEE-eeH--HHHHHHHHHHh----------cCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            46677 999  55676666544          37999999999863  34567889999999999999999999999999


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      ++++ .++||++||..+.                    .+.++...|+.+|++++.++++++.++.   +.+|++++|+|
T Consensus       128 ~~~~-~g~iv~isS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~P  183 (249)
T 1o5i_A          128 KEKG-WGRIVAITSFSVI--------------------SPIENLYTSNSARMALTGFLKTLSFEVA---PYGITVNCVAP  183 (249)
T ss_dssp             HHHT-CEEEEEECCGGGT--------------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEE
T ss_pred             HHcC-CcEEEEEcchHhc--------------------CCCCCCchHHHHHHHHHHHHHHHHHHhh---hcCeEEEEEee
Confidence            8766 7899999998873                    2456678899999999999999999997   78999999999


Q ss_pred             CcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCcc
Q 024553          170 GVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  230 (266)
Q Consensus       170 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~  230 (266)
                      |+++|++.................+++++.+|+++|+.+++++... ...+|.++..++|..
T Consensus       184 g~v~t~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~s~~~~~~tG~~~~vdgG~~  245 (249)
T 1o5i_A          184 GWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDGGLS  245 (249)
T ss_dssp             CSBCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             CCCccCcccccchhhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence            9999998653221111101111234567789999999999665432 356799988887754

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.91  E-value=4.6e-24  Score=173.60  Aligned_cols=171  Identities=23%  Similarity=0.256  Sum_probs=133.3

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      ++.++.+|+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.+++.+++.+++.|
T Consensus        51 ~~~~~~~D~~~~~~~~~~~~~~~~------~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~  124 (234)
T 2ehd_A           51 GALPLPGDVREEGDWARAVAAMEE------AFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPAL  124 (234)
T ss_dssp             TCEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             hceEEEecCCCHHHHHHHHHHHHH------HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            578999999999999999999988      4578999999999863  44567888999999999999999999999999


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      ++++ .++||++||..+.                    .+.++...|+.+|++++.++++++.++.   +.+|+++.|+|
T Consensus       125 ~~~~-~~~iv~isS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~P  180 (234)
T 2ehd_A          125 LRRG-GGTIVNVGSLAGK--------------------NPFKGGAAYNASKFGLLGLAGAAMLDLR---EANVRVVNVLP  180 (234)
T ss_dssp             HTTT-CEEEEEECCTTTT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEC
T ss_pred             HhCC-CcEEEEECCchhc--------------------CCCCCCchhhHHHHHHHHHHHHHHHHHh---hcCcEEEEEEe
Confidence            8876 7899999998863                    2455677899999999999999999997   78999999999


Q ss_pred             CcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC-Ccccceee
Q 024553          170 GVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFF  224 (266)
Q Consensus       170 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~-~~~G~~~~  224 (266)
                      |+++|++....+..     +       ...+|+++|+.+++++..+. ...|....
T Consensus       181 g~v~t~~~~~~~~~-----~-------~~~~~~dvA~~~~~l~~~~~~~~~g~~~~  224 (234)
T 2ehd_A          181 GSVDTGFAGNTPGQ-----A-------WKLKPEDVAQAVLFALEMPGHAMVSEIEL  224 (234)
T ss_dssp             C----------------------------CCHHHHHHHHHHHHHSCCSSCCCEEEC
T ss_pred             CCCcCCcccccccc-----c-------CCCCHHHHHHHHHHHhCCCcccccceEEE
Confidence            99999986543211     0       03499999999997765443 34555544

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.91  E-value=1.1e-24  Score=199.43  Aligned_cols=172  Identities=23%  Similarity=0.254  Sum_probs=141.1

Q ss_pred             EecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCC
Q 024553           17 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPV   94 (266)
Q Consensus        17 ~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~   94 (266)
                      .+|+++.++++++++++.+      .+++||+||||||+..  ++.+++.++|+++|++|+.|++++++.++|+|++++ 
T Consensus        69 ~~d~~d~~~~~~~v~~~~~------~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~-  141 (604)
T 2et6_A           69 VADYNNVLDGDKIVETAVK------NFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQK-  141 (604)
T ss_dssp             EEECCCTTCHHHHHHHHHH------HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-
T ss_pred             EEEcCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-
Confidence            3688988889999999988      5689999999999863  567889999999999999999999999999998876 


Q ss_pred             CCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcccC
Q 024553           95 PSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKT  174 (266)
Q Consensus        95 ~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~T  174 (266)
                      .|+||++||.++..                    +.++...|++||+++..|+++|+.++.   ++||+||+|+|| +.|
T Consensus       142 ~G~IVnisS~ag~~--------------------~~~~~~~Y~asKaal~~lt~~la~El~---~~gIrVn~v~Pg-~~T  197 (604)
T 2et6_A          142 YGRIVNTSSPAGLY--------------------GNFGQANYASAKSALLGFAETLAKEGA---KYNIKANAIAPL-ARS  197 (604)
T ss_dssp             CEEEEEECCHHHHH--------------------CCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEEC-CCC
T ss_pred             CCEEEEECCHHHcC--------------------CCCCchHHHHHHHHHHHHHHHHHHHhC---ccCeEEEEEccC-CcC
Confidence            79999999988743                    456678899999999999999999998   789999999998 688


Q ss_pred             CccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCc
Q 024553          175 NIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGR  229 (266)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~  229 (266)
                      ++.....+..          .....+|+++|..+++++......+|..+..++|.
T Consensus       198 ~m~~~~~~~~----------~~~~~~pe~vA~~v~~L~s~~~~itG~~~~vdgG~  242 (604)
T 2et6_A          198 RMTESIMPPP----------MLEKLGPEKVAPLVLYLSSAENELTGQFFEVAAGF  242 (604)
T ss_dssp             HHHHTTSCHH----------HHTTCSHHHHHHHHHHHTSSSCCCCSCEEEEETTE
T ss_pred             ccccccCChh----------hhccCCHHHHHHHHHHHhCCcccCCCCEEEECCCe
Confidence            7754321110          01234999999999965543345578888777774

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.91  E-value=3.2e-24  Score=175.54  Aligned_cols=184  Identities=22%  Similarity=0.244  Sum_probs=143.5

Q ss_pred             EEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           13 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        13 ~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      +.++.+|+++.++++++++          .++++|+||||||...  +..+.+.++|++++++|+.+++.+++.+++.|+
T Consensus        54 ~~~~~~D~~~~~~~~~~~~----------~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~  123 (244)
T 3d3w_A           54 IEPVCVDLGDWEATERALG----------SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLI  123 (244)
T ss_dssp             CEEEECCTTCHHHHHHHHT----------TCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCHHHHHHHHH----------HcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence            4677999999999988775          3478999999999863  445667889999999999999999999999998


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                      +++..++||++||..+.                    .+.++...|+.+|++++.++++++.++.   +.+|+++.|+||
T Consensus       124 ~~~~~~~iv~~sS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~~i~v~~v~Pg  180 (244)
T 3d3w_A          124 ARGVPGAIVNVSSQCSQ--------------------RAVTNHSVYCSTKGALDMLTKVMALELG---PHKIRVNAVNPT  180 (244)
T ss_dssp             HHTCCEEEEEECCGGGT--------------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEEC
T ss_pred             hCCCCcEEEEeCchhhc--------------------cCCCCCchHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEEec
Confidence            65325899999998863                    2455678899999999999999999997   789999999999


Q ss_pred             cccCCccCcc-hhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          171 VVKTNIMREV-PSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       171 ~v~T~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      ++.|++.... .............+.+++.+|+++|+.+++++... ...+|..+..++|.
T Consensus       181 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  241 (244)
T 3d3w_A          181 VVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGGF  241 (244)
T ss_dssp             CBTTTTHHHHSCSTTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             cccccchhhhccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCc
Confidence            9999986531 11111111112234567789999999999766432 34578888877764

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.91  E-value=9.3e-25  Score=179.74  Aligned_cols=178  Identities=13%  Similarity=0.041  Sum_probs=145.1

Q ss_pred             EEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCC---CCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           14 EAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT---SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        14 ~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      ..+.+|+++.++++++++++.+      .++++|+||||||+...   ..+.+.++|++++++|+.|++.+++.++|.|+
T Consensus        62 ~~~~~d~~d~~~v~~~~~~~~~------~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~  135 (251)
T 3orf_A           62 HSFTIKDSGEEEIKSVIEKINS------KSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLN  135 (251)
T ss_dssp             EEEECSCSSHHHHHHHHHHHHT------TTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred             cceEEEeCCHHHHHHHHHHHHH------HcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhc
Confidence            4678999999999999999998      77999999999998742   45667889999999999999999999999997


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                      +   .|+||++||..+.                    .+.+....|+++|++++.++++++.+++. .+++|+|++|+||
T Consensus       136 ~---~g~iv~isS~~~~--------------------~~~~~~~~Y~~sKaa~~~~~~~la~e~~~-~~~gi~v~~v~PG  191 (251)
T 3orf_A          136 Q---GGLFVLTGASAAL--------------------NRTSGMIAYGATKAATHHIIKDLASENGG-LPAGSTSLGILPV  191 (251)
T ss_dssp             E---EEEEEEECCGGGG--------------------SCCTTBHHHHHHHHHHHHHHHHHTSTTSS-SCTTCEEEEEEES
T ss_pred             c---CCEEEEEechhhc--------------------cCCCCCchhHHHHHHHHHHHHHHHHHhcc-cCCCcEEEEEecC
Confidence            6   5799999998873                    35667789999999999999999999631 1589999999999


Q ss_pred             cccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC--CCCcccceeecCCCcc
Q 024553          171 VVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA--PPETSGVYFFGGKGRT  230 (266)
Q Consensus       171 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~--~~~~~G~~~~~~~g~~  230 (266)
                      +|+|++.......         .+.+++.+|+++|+.+++++..  ....+|..+....|+.
T Consensus       192 ~v~t~~~~~~~~~---------~~~~~~~~~~dva~~i~~l~~~~~~~~~tG~~i~v~~g~~  244 (251)
T 3orf_A          192 TLDTPTNRKYMSD---------ANFDDWTPLSEVAEKLFEWSTNSDSRPTNGSLVKFETKSK  244 (251)
T ss_dssp             CBCCHHHHHHCTT---------SCGGGSBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEETT
T ss_pred             cCcCcchhhhccc---------ccccccCCHHHHHHHHHHHhcCccccCCcceEEEEecCCc
Confidence            9999875432111         1234667999999999976655  2356788877655543

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.91  E-value=8.1e-24  Score=175.46  Aligned_cols=179  Identities=20%  Similarity=0.263  Sum_probs=146.0

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCC--CcceeeEcCCCCC---CCCcCCCcccchhhhhhhhhHHHHHHhh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHS--SIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLL   85 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~--~ld~lv~nAG~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~   85 (266)
                      .++.++.||+++.++++++++++.+.      ++  ++|+||||||+..   +..+.+.+++++++++|+.+++.+++.+
T Consensus        72 ~~~~~~~~Dl~~~~~v~~~~~~~~~~------~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~  145 (267)
T 1sny_A           72 SNIHILEIDLRNFDAYDKLVADIEGV------TKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKAC  145 (267)
T ss_dssp             TTEEEEECCTTCGGGHHHHHHHHHHH------HGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             CceEEEEecCCChHHHHHHHHHHHHh------cCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHH
Confidence            46899999999999999999999883      45  7999999999864   3456778899999999999999999999


Q ss_pred             HHHHhcC------CC----CCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhC
Q 024553           86 LPLLKNS------PV----PSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLG  155 (266)
Q Consensus        86 ~~~l~~~------~~----~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~  155 (266)
                      ++.|+++      +.    .++||++||..+...                 ....++...|+.+|++++.++++++.++.
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------------~~~~~~~~~Y~~sK~a~~~~~~~la~e~~  208 (267)
T 1sny_A          146 LPLLKKAAKANESQPMGVGRAAIINMSSILGSIQ-----------------GNTDGGMYAYRTSKSALNAATKSLSVDLY  208 (267)
T ss_dssp             HHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCST-----------------TCCSCCCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             HHHHhhcccccccccccCCCceEEEEeccccccc-----------------CCCCCCchHHHHHHHHHHHHHHHHHHHhh
Confidence            9999864      11    479999999886431                 11123456799999999999999999997


Q ss_pred             CCCCCCeEEEEecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCcccc
Q 024553          156 LDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  232 (266)
Q Consensus       156 ~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~~  232 (266)
                         +.+|++++|+||+|+|++....                ...+|+++|+.+++++... ...+|.|+..+ |+.++
T Consensus       209 ---~~gi~v~~v~Pg~v~t~~~~~~----------------~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~-g~~~~  266 (267)
T 1sny_A          209 ---PQRIMCVSLHPGWVKTDMGGSS----------------APLDVPTSTGQIVQTISKLGEKQNGGFVNYD-GTPLA  266 (267)
T ss_dssp             ---GGTCEEEEECCCSBCSTTTCTT----------------CSBCHHHHHHHHHHHHHHCCGGGTTCEECTT-SCBCC
T ss_pred             ---cCCcEEEEeCCcceecCCCCCC----------------CCCCHHHHHHHHHHHHHhcCcCCCCcEEccC-CcCcC
Confidence               7899999999999999987541                2359999999999877654 35689998754 44444

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.91  E-value=3.6e-24  Score=178.15  Aligned_cols=189  Identities=21%  Similarity=0.234  Sum_probs=148.6

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.+|+++.++++++++++.+      .++++|+||||||...  +..+.+.++|++++++|+.+++.+++.+++
T Consensus        70 ~~~~~~~~~D~~~~~~~~~~~~~~~~------~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  143 (274)
T 1ja9_A           70 GAQGVAIQADISKPSEVVALFDKAVS------HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLK  143 (274)
T ss_dssp             TCCEEEEECCTTSHHHHHHHHHHHHH------HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCcEEEEEecCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34688999999999999999999988      4579999999999863  345678889999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++   +++||++||..+..                   .+.+....|+.+|++++.++++++.++.   ..+|+++.+
T Consensus       144 ~~~~---~~~iv~~sS~~~~~-------------------~~~~~~~~Y~~sK~a~~~~~~~~~~e~~---~~gi~v~~v  198 (274)
T 1ja9_A          144 HCRR---GGRIILTSSIAAVM-------------------TGIPNHALYAGSKAAVEGFCRAFAVDCG---AKGVTVNCI  198 (274)
T ss_dssp             HEEE---EEEEEEECCGGGTC-------------------CSCCSCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEE
T ss_pred             HHhh---CCEEEEEcChHhcc-------------------CCCCCCchHHHHHHHHHHHHHHHHHHhh---hcCeEEEEE
Confidence            9973   48999999988631                   2345567899999999999999999997   789999999


Q ss_pred             cCCcccCCccCc------------chhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          168 DPGVVKTNIMRE------------VPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       168 ~PG~v~T~~~~~------------~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      +||++.|++...            ..............+++++.+|+|+|+.+++++... ...+|..|..++|.
T Consensus       199 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG~  273 (274)
T 1ja9_A          199 APGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGGG  273 (274)
T ss_dssp             EECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             eeCcccccchhcccccccccccccCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCcccccccCcEEEecCCc
Confidence            999999987652            110111111122234567789999999999765432 23478888776663

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.91  E-value=4.5e-25  Score=180.55  Aligned_cols=179  Identities=13%  Similarity=0.006  Sum_probs=141.9

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCC--CCcceeeEcCCCCC--CC-CcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMH--SSIQLLINNAGILA--TS-SRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~--~~ld~lv~nAG~~~--~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      ...++.+|+++.++++++++++.+      .+  +++|+||||||+..  +. .+.+.++|++++++|+.+++.+++.++
T Consensus        47 ~~~~~~~D~~~~~~v~~~~~~~~~------~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~  120 (241)
T 1dhr_A           47 ASVIVKMTDSFTEQADQVTAEVGK------LLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLAT  120 (241)
T ss_dssp             EEEECCCCSCHHHHHHHHHHHHHH------HHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcEEEEcCCCCHHHHHHHHHHHHH------HhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            357889999999999999999988      44  68999999999863  33 456778899999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |+|++   +++||++||..+..                    +.++...|+.+|++++.++++++.++.. .+.+|+||+
T Consensus       121 ~~~~~---~g~iv~isS~~~~~--------------------~~~~~~~Y~asK~a~~~~~~~la~e~~~-~~~gi~v~~  176 (241)
T 1dhr_A          121 KHLKE---GGLLTLAGAKAALD--------------------GTPGMIGYGMAKGAVHQLCQSLAGKNSG-MPSGAAAIA  176 (241)
T ss_dssp             HHEEE---EEEEEEECCGGGGS--------------------CCTTBHHHHHHHHHHHHHHHHHTSTTSS-CCTTCEEEE
T ss_pred             Hhhcc---CCEEEEECCHHHcc--------------------CCCCchHHHHHHHHHHHHHHHHHHHhcc-CCCCeEEEE
Confidence            99976   47999999988732                    4566788999999999999999999841 047899999


Q ss_pred             ecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCc
Q 024553          167 ADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  229 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~  229 (266)
                      |+||+++|++.....+..         .+....+|+++|+.+++++... ...+|.++..++|+
T Consensus       177 v~PG~v~T~~~~~~~~~~---------~~~~~~~~~~vA~~v~~l~~~~~~~~~G~~~~v~g~~  231 (241)
T 1dhr_A          177 VLPVTLDTPMNRKSMPEA---------DFSSWTPLEFLVETFHDWITGNKRPNSGSLIQVVTTD  231 (241)
T ss_dssp             EEESCEECHHHHHHSTTS---------CGGGSEEHHHHHHHHHHHHTTTTCCCTTCEEEEEEET
T ss_pred             EecCcccCccccccCcch---------hhccCCCHHHHHHHHHHHhcCCCcCccceEEEEeCCC
Confidence            999999999754321110         0123458999999999766432 24578888765544

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.91  E-value=1.7e-24  Score=178.49  Aligned_cols=191  Identities=20%  Similarity=0.184  Sum_probs=149.6

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCC-C--CCCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI-L--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~-~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      +.++.++.||+++.++++++++++.+      .++++|+||||||. .  .+..+.+.++|++++++|+.+++.+++.++
T Consensus        56 ~~~~~~~~~D~~~~~~~~~~~~~~~~------~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  129 (258)
T 3afn_B           56 GGDAAFFAADLATSEACQQLVDEFVA------KFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFAL  129 (258)
T ss_dssp             TCEEEEEECCTTSHHHHHHHHHHHHH------HHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CCceEEEECCCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHH
Confidence            34789999999999999999999988      55799999999997 3  234567788899999999999999999999


Q ss_pred             HHHhcCC----CCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCe
Q 024553           87 PLLKNSP----VPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHV  162 (266)
Q Consensus        87 ~~l~~~~----~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i  162 (266)
                      |.|++++    ..++||++||..+..                   .+.++...|+.+|++++.++++++.++.   +.+|
T Consensus       130 ~~~~~~~~~~~~~~~iv~~sS~~~~~-------------------~~~~~~~~Y~~sK~a~~~~~~~~~~e~~---~~gi  187 (258)
T 3afn_B          130 PHLAAAAKASGQTSAVISTGSIAGHT-------------------GGGPGAGLYGAAKAFLHNVHKNWVDFHT---KDGV  187 (258)
T ss_dssp             HHHHHHHHHHTSCEEEEEECCTHHHH-------------------CCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTE
T ss_pred             HHHHhcccCCCCCcEEEEecchhhcc-------------------CCCCCchHHHHHHHHHHHHHHHHHHhhc---ccCe
Confidence            9987532    137999999987632                   1345567899999999999999999997   7899


Q ss_pred             EEEEecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC--CcccceeecCCCc
Q 024553          163 SVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP--ETSGVYFFGGKGR  229 (266)
Q Consensus       163 ~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~--~~~G~~~~~~~g~  229 (266)
                      +++.++||++.|++.....+.. ........+++++.+|+++|+.+++++....  ..+|..+..++|.
T Consensus       188 ~v~~v~Pg~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg~  255 (258)
T 3afn_B          188 RFNIVSPGTVDTAFHADKTQDV-RDRISNGIPMGRFGTAEEMAPAFLFFASHLASGYITGQVLDINGGQ  255 (258)
T ss_dssp             EEEEEEECSBSSGGGTTCCHHH-HHHHHTTCTTCSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred             EEEEEeCCCcccccccccCHHH-HHHHhccCCCCcCCCHHHHHHHHHHHhCcchhccccCCEEeECCCc
Confidence            9999999999999876542211 1111112245567899999999996554221  3468888877764

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.91  E-value=1.3e-23  Score=174.86  Aligned_cols=168  Identities=22%  Similarity=0.311  Sum_probs=139.5

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.+|+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.+++.+++.++|
T Consensus        79 ~~~~~~~~~Dl~~~~~v~~~~~~~~~------~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  152 (272)
T 1yb1_A           79 GAKVHTFVVDCSNREDIYSSAKKVKA------EIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLP  152 (272)
T ss_dssp             TCCEEEEECCTTCHHHHHHHHHHHHH------HTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCeEEEEEeeCCCHHHHHHHHHHHHH------HCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            34789999999999999999999988      5689999999999863  345667788999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++++ .++||++||..+.                    .+.+....|+.+|++++.++++++.++....+.+|++++|
T Consensus       153 ~~~~~~-~~~iv~isS~~~~--------------------~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v  211 (272)
T 1yb1_A          153 AMTKNN-HGHIVTVASAAGH--------------------VSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCL  211 (272)
T ss_dssp             HHHHTT-CEEEEEECCCC-C--------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEE
T ss_pred             HHHhcC-CCEEEEEechhhc--------------------CCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEE
Confidence            998876 7899999998863                    2445678899999999999999999983100369999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP  215 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~  215 (266)
                      +||+++|++....           ..+++++.+|+++|+.+++++..+
T Consensus       212 ~Pg~v~t~~~~~~-----------~~~~~~~~~~~dva~~i~~~~~~~  248 (272)
T 1yb1_A          212 CPNFVNTGFIKNP-----------STSLGPTLEPEEVVNRLMHGILTE  248 (272)
T ss_dssp             EETHHHHCSTTCT-----------HHHHCCCCCHHHHHHHHHHHHHTT
T ss_pred             eCCcccCCccccc-----------cccccCCCCHHHHHHHHHHHHHcC
Confidence            9999999986431           123456779999999999877554

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.91  E-value=1.4e-23  Score=175.35  Aligned_cols=181  Identities=20%  Similarity=0.267  Sum_probs=139.2

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      ..++.++.||+++.++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.+++.+++.+++
T Consensus        82 ~~~~~~~~~Dl~~~~~v~~~~~~~~~------~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~  155 (279)
T 1xg5_A           82 PGTLIPYRCDLSNEEDILSMFSAIRS------QHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQ  155 (279)
T ss_dssp             SSEEEEEECCTTCHHHHHHHHHHHHH------HHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CceEEEEEecCCCHHHHHHHHHHHHH------hCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            35788999999999999999999988      4578999999999863  445668889999999999999999999999


Q ss_pred             HHhcCCC-CCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           88 LLKNSPV-PSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        88 ~l~~~~~-~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      .|++.+. .++||++||..+..                  ..+.++...|+++|++++.++++++.++.. ...+|+++.
T Consensus       156 ~~~~~~~~~g~iv~isS~~~~~------------------~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~-~~~~i~v~~  216 (279)
T 1xg5_A          156 SMKERNVDDGHIININSMSGHR------------------VLPLSVTHFYSATKYAVTALTEGLRQELRE-AQTHIRATC  216 (279)
T ss_dssp             HHHHTTCCSCEEEEECCGGGTS------------------CCSCGGGHHHHHHHHHHHHHHHHHHHHHHH-TTCCCEEEE
T ss_pred             HHHhcCCCCceEEEEcChhhcc------------------cCCCCCCchhHHHHHHHHHHHHHHHHHHhh-cCCCeEEEE
Confidence            9987652 38999999988631                  124566788999999999999999999731 046899999


Q ss_pred             ecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC
Q 024553          167 ADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP  216 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~  216 (266)
                      |+||+|.|++........... .....+..++.+|+|+|+.+++++..+.
T Consensus       217 v~Pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~dvA~~i~~l~~~~~  265 (279)
T 1xg5_A          217 ISPGVVETQFAFKLHDKDPEK-AAATYEQMKCLKPEDVAEAVIYVLSTPA  265 (279)
T ss_dssp             EEESCBCSSHHHHHTTTCHHH-HHHHHC---CBCHHHHHHHHHHHHHSCT
T ss_pred             EecCcccchhhhhhcccChhH-HhhhcccccCCCHHHHHHHHHHHhcCCc
Confidence            999999999843211100000 1111122356799999999997765543

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.90  E-value=4.6e-24  Score=196.02  Aligned_cols=198  Identities=16%  Similarity=0.178  Sum_probs=143.6

Q ss_pred             EecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCC
Q 024553           17 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPV   94 (266)
Q Consensus        17 ~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~   94 (266)
                      .+|+++.++++++++++.+      .++++|+||||||+..  ++.+.+.++|++++++|+.|++++++.++|+|++++ 
T Consensus        80 ~~D~~d~~~~~~~~~~~~~------~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~-  152 (613)
T 3oml_A           80 VADYNSVIDGAKVIETAIK------AFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQN-  152 (613)
T ss_dssp             EECCCCGGGHHHHHC----------------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-
T ss_pred             EEEeCCHHHHHHHHHHHHH------HCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-
Confidence            4899999999999999988      6789999999999873  456788999999999999999999999999999877 


Q ss_pred             CCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcccC
Q 024553           95 PSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKT  174 (266)
Q Consensus        95 ~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~T  174 (266)
                      .|+||++||.++..                    +.++...|++||+++..++++++.+++   +.+|+||+|+||++ |
T Consensus       153 ~g~IV~isS~a~~~--------------------~~~~~~~Y~asKaal~~lt~~la~e~~---~~gI~vn~v~Pg~~-t  208 (613)
T 3oml_A          153 YGRIIMTSSNSGIY--------------------GNFGQVNYTAAKMGLIGLANTVAIEGA---RNNVLCNVIVPTAA-S  208 (613)
T ss_dssp             CEEEEEECCHHHHH--------------------CCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEEC----
T ss_pred             CCEEEEECCHHHcC--------------------CCCCChHHHHHHHHHHHHHHHHHHHhC---ccCeEEEEEECCCC-C
Confidence            79999999988743                    456678899999999999999999998   78999999999975 5


Q ss_pred             CccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc------------CC-ccccCHH
Q 024553          175 NIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN------------SS-ALSFNSK  241 (266)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~------------~~-~~~~~~~  241 (266)
                      ++.....+..          .....+|+++|..+++++......+|.++..++|....            .. ....+++
T Consensus       209 ~~~~~~~~~~----------~~~~~~pedvA~~v~~L~s~~~~~tG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~~~~e  278 (613)
T 3oml_A          209 RMTEGILPDI----------LFNELKPKLIAPVVAYLCHESCEDNGSYIESAAGWATKLHMVRGKGAVLRPSLDDPVTIE  278 (613)
T ss_dssp             ---CCCCCHH----------HHTTCCGGGTHHHHHHTTSTTCCCCSCEEEEETTEEEEECCCBCCCCCSSSSTTSCCCHH
T ss_pred             hhhhhccchh----------hhhcCCHHHHHHHHHHhcCCCcCCCceEEEECCCeEEEEEEEecCCEEecCccccCCCHH
Confidence            5555432211          11334999999999954433334578888776664321            10 1234677


Q ss_pred             HHHHHHHHHHHHhh
Q 024553          242 LAGELWTTSCNLFI  255 (266)
Q Consensus       242 ~~~~~~~~~~~~~~  255 (266)
                      ...+.|+.+.++-.
T Consensus       279 ~~~~~w~~i~~~~~  292 (613)
T 3oml_A          279 YVKDVWSNVTDMSK  292 (613)
T ss_dssp             HHHHTHHHHTCCTT
T ss_pred             HHHHHHHHhhcccc
Confidence            88888887765543

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.90  E-value=1.3e-23  Score=171.81  Aligned_cols=185  Identities=24%  Similarity=0.294  Sum_probs=143.3

Q ss_pred             EEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           13 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        13 ~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      +.++.+|+++.++++++++          .++++|+||||||...  +..+.+.++|++++++|+.+++.+++.+++.|+
T Consensus        54 ~~~~~~D~~~~~~~~~~~~----------~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~  123 (244)
T 1cyd_A           54 IEPVCVDLGDWDATEKALG----------GIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMI  123 (244)
T ss_dssp             CEEEECCTTCHHHHHHHHT----------TCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             CCcEEecCCCHHHHHHHHH----------HcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence            5677999999999988775          2478999999999863  345677889999999999999999999999997


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                      +++..++||++||..+..                    +.+....|+.+|++++.++++++.++.   ..+|+++.++||
T Consensus       124 ~~~~~~~iv~~sS~~~~~--------------------~~~~~~~Y~~sK~a~~~~~~~~a~~~~---~~gi~v~~v~pg  180 (244)
T 1cyd_A          124 NRGVPGSIVNVSSMVAHV--------------------TFPNLITYSSTKGAMTMLTKAMAMELG---PHKIRVNSVNPT  180 (244)
T ss_dssp             HHTCCEEEEEECCGGGTS--------------------CCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEEC
T ss_pred             hCCCCeEEEEEcchhhcC--------------------CCCCcchhHHHHHHHHHHHHHHHHHhh---hcCeEEEEEecC
Confidence            653257999999988632                    455677899999999999999999997   789999999999


Q ss_pred             cccCCccCcc-hhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCcc
Q 024553          171 VVKTNIMREV-PSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  230 (266)
Q Consensus       171 ~v~T~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~  230 (266)
                      ++.|++.... .............+++++.+|+|+|+.+++++... ...+|..+..++|..
T Consensus       181 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  242 (244)
T 1cyd_A          181 VVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGGGILVDAGYL  242 (244)
T ss_dssp             CBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSSEEEESTTGG
T ss_pred             cccCccccccccCHHHHHHHHhcCCccCCCCHHHHHHHHHHHhCchhhcccCCEEEECCCcc
Confidence            9999875421 11111111122234567789999999999765432 245788887677653

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.90  E-value=1e-24  Score=177.88  Aligned_cols=179  Identities=12%  Similarity=-0.021  Sum_probs=142.0

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCC--CCcceeeEcCCCCC--CC-CcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMH--SSIQLLINNAGILA--TS-SRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~--~~ld~lv~nAG~~~--~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      ...++.+|+++.++++++++++.+      .+  +++|+||||||+..  +. .+.+.++|++++++|+.+++.+++.++
T Consensus        43 ~~~~~~~D~~~~~~~~~~~~~~~~------~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  116 (236)
T 1ooe_A           43 SNILVDGNKNWTEQEQSILEQTAS------SLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLAT  116 (236)
T ss_dssp             EEEECCTTSCHHHHHHHHHHHHHH------HHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccEEEeCCCCCHHHHHHHHHHHHH------HhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            357789999999999999999988      44  68999999999863  33 456778899999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |.|++   .++||++||..+.                    .+.++...|+.+|++++.++++++.++.. .+.+|++++
T Consensus       117 ~~~~~---~g~iv~isS~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~-~~~gi~v~~  172 (236)
T 1ooe_A          117 THLKP---GGLLQLTGAAAAM--------------------GPTPSMIGYGMAKAAVHHLTSSLAAKDSG-LPDNSAVLT  172 (236)
T ss_dssp             HHEEE---EEEEEEECCGGGG--------------------SCCTTBHHHHHHHHHHHHHHHHHHSTTSS-CCTTCEEEE
T ss_pred             HHhcc---CCEEEEECchhhc--------------------cCCCCcHHHHHHHHHHHHHHHHHHHHhcc-cCCCeEEEE
Confidence            99976   4799999998873                    24566788999999999999999999831 147899999


Q ss_pred             ecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC--CCcccceeecCCCc
Q 024553          167 ADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP--PETSGVYFFGGKGR  229 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~--~~~~G~~~~~~~g~  229 (266)
                      |+||+++|++.....+..         ......+|+++|+.+++++..+  ...+|.++..++|.
T Consensus       173 v~Pg~v~t~~~~~~~~~~---------~~~~~~~~~dvA~~i~~~l~s~~~~~~~G~~~~v~gg~  228 (236)
T 1ooe_A          173 IMPVTLDTPMNRKWMPNA---------DHSSWTPLSFISEHLLKWTTETSSRPSSGALLKITTEN  228 (236)
T ss_dssp             EEESCBCCHHHHHHSTTC---------CGGGCBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEET
T ss_pred             EecCcccCcchhhcCCCc---------cccccCCHHHHHHHHHHHHcCCCcccccccEEEEecCC
Confidence            999999998754321100         1123468999999998655433  34578888766554

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.90  E-value=2.6e-24  Score=177.50  Aligned_cols=198  Identities=15%  Similarity=0.089  Sum_probs=130.7

Q ss_pred             EEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCCC
Q 024553           16 FQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVP   95 (266)
Q Consensus        16 i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~   95 (266)
                      +.+|+++.++++++++++         .+++|+||||||+..+     .+.|++++++|+.+++.+++.++|.|++++ .
T Consensus        42 ~~~Dl~~~~~v~~~~~~~---------~~~id~lv~~Ag~~~~-----~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~  106 (257)
T 1fjh_A           42 LSTAEGRKQAIADVLAKC---------SKGMDGLVLCAGLGPQ-----TKVLGNVVSVNYFGATELMDAFLPALKKGH-Q  106 (257)
T ss_dssp             TTSHHHHHHHHHHHHTTC---------TTCCSEEEECCCCCTT-----CSSHHHHHHHHTHHHHHHHHHHHHHHHTSS-S
T ss_pred             cccCCCCHHHHHHHHHHh---------CCCCCEEEECCCCCCC-----cccHHHHHHHhhHHHHHHHHHHHHHHhhcC-C
Confidence            458999888888877522         1789999999998642     234999999999999999999999998876 7


Q ss_pred             CeEEEEcCCcccccccccCCccc-cccCcc-------cCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           96 SRIVNVTSFTHRNVFNAQVNNET-ITGKFF-------LRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        96 ~~iv~vsS~~~~~~~~~~~~~~~-~~~~~~-------~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      ++||++||..+............ +...+.       .+..+.++...|+.||++++.++++++.++.   +.+|++++|
T Consensus       107 g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v  183 (257)
T 1fjh_A          107 PAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWG---EAGVRLNTI  183 (257)
T ss_dssp             CEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHH---HTTCEEEEE
T ss_pred             cEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHh---hcCeEEEEE
Confidence            89999999987521100000000 000000       0002445678999999999999999999997   789999999


Q ss_pred             cCCcccCCccCcc-hhHHHHHHHHH-HHHhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCccc
Q 024553          168 DPGVVKTNIMREV-PSFLSLMAFTV-LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  231 (266)
Q Consensus       168 ~PG~v~T~~~~~~-~~~~~~~~~~~-~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~  231 (266)
                      +||+|+|++.... ........... ..+++++.+|+++|+.+++++... ...+|.++..++|...
T Consensus       184 ~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~~~  250 (257)
T 1fjh_A          184 APGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDA  250 (257)
T ss_dssp             EECC---------------------CCCSTTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             eeCCCCCccchhhccchhHHHHHHhcccccCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECCCccc
Confidence            9999999987654 21110000000 124456789999999999655432 2567999887777643

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.90  E-value=1.8e-23  Score=173.82  Aligned_cols=191  Identities=26%  Similarity=0.398  Sum_probs=142.4

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCC-CcCC-CcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS-SRLT-PEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~-~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.+|+++.++++++++++.+      .++++|+||||||+.... ...+ .+++++++++|+.|++.+++.+++.
T Consensus        54 ~~~~~~~~Dl~~~~~~~~~~~~~~~------~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  127 (276)
T 1wma_A           54 LSPRFHQLDIDDLQSIRALRDFLRK------EYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPL  127 (276)
T ss_dssp             CCCEEEECCTTCHHHHHHHHHHHHH------HHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             CeeEEEECCCCCHHHHHHHHHHHHH------hcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHh
Confidence            4688999999999999999999988      457899999999987432 2223 4789999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccc------------cCCcccccc----------CcccCCCCCChhhcchHhHHHHHHH
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNA------------QVNNETITG----------KFFLRSKCYPCARIYEYSKLCLLIF  146 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~------------~~~~~~~~~----------~~~~~~~~~~~~~~Y~~sK~~~~~~  146 (266)
                      |++   .++||++||..+......            .+..+++..          .........+. ..|+.+|++++.+
T Consensus       128 ~~~---~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~~  203 (276)
T 1wma_A          128 IKP---QGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPS-SAYGVTKIGVTVL  203 (276)
T ss_dssp             EEE---EEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCS-CHHHHHHHHHHHH
T ss_pred             hCC---CCEEEEECChhhhcccccCChhHHhhccccccchhhhhhhhhhhhhhhcccccccCCCcc-chhHHHHHHHHHH
Confidence            876   479999999876431000            011100000          00000011222 6899999999999


Q ss_pred             HHHHHHhhCCCCC----CCeEEEEecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC---Ccc
Q 024553          147 SYELHRNLGLDKS----RHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETS  219 (266)
Q Consensus       147 ~~~la~~~~~~~~----~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~---~~~  219 (266)
                      ++.+++++.   .    .+|++++|+||+|.|++...                ..+.+|+++|+.+++++..+.   ..+
T Consensus       204 ~~~la~~~~---~~~~~~~i~v~~v~PG~v~t~~~~~----------------~~~~~~~~~a~~~~~l~~~~~~~~~~~  264 (276)
T 1wma_A          204 SRIHARKLS---EQRKGDKILLNACCPGWVRTDMAGP----------------KATKSPEEGAETPVYLALLPPDAEGPH  264 (276)
T ss_dssp             HHHHHHHHH---HHCTTSCCEEEEEECCSBCSTTTCT----------------TCSBCHHHHTHHHHHHHSCCTTCCCCC
T ss_pred             HHHHHHHhh---cccCCCceEEEEecCCccccCcCCc----------------cccCChhHhhhhHhhhhcCcccccccC
Confidence            999999986   4    69999999999999998754                135699999999998776442   568


Q ss_pred             cceeecCCCcccc
Q 024553          220 GVYFFGGKGRTVN  232 (266)
Q Consensus       220 G~~~~~~~g~~~~  232 (266)
                      |.++.  .++.++
T Consensus       265 G~~~~--~~~~~~  275 (276)
T 1wma_A          265 GQFVS--EKRVEQ  275 (276)
T ss_dssp             SCEEE--TTEEEC
T ss_pred             ceEec--cCceec
Confidence            99987  445544

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.90  E-value=1.7e-24  Score=177.41  Aligned_cols=173  Identities=15%  Similarity=0.109  Sum_probs=116.5

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      ++.++.+|+++.++ .+.+.++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|++.+++.++|.|
T Consensus        49 ~~~~~~~D~~~~~~-~~~~~~~~~------~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~  121 (245)
T 3e9n_A           49 GVEPIESDIVKEVL-EEGGVDKLK------NLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPAL  121 (245)
T ss_dssp             TEEEEECCHHHHHH-TSSSCGGGT------TCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             CCcceecccchHHH-HHHHHHHHH------hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            58899999998877 333333334      5689999999999873  44566788999999999999999999999999


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      ++++  ++||++||..+.                    .+.++...|+++|++++.++++++.++.   +.+|+|++|+|
T Consensus       122 ~~~~--g~iv~isS~~~~--------------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~P  176 (245)
T 3e9n_A          122 RAAS--GCVIYINSGAGN--------------------GPHPGNTIYAASKHALRGLADAFRKEEA---NNGIRVSTVSP  176 (245)
T ss_dssp             HHHT--CEEEEEC------------------------------CHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEE
T ss_pred             hhcC--CeEEEEcCcccc--------------------cCCCCchHHHHHHHHHHHHHHHHHHHhh---hcCeEEEEEec
Confidence            8753  899999998873                    3566678899999999999999999997   78999999999


Q ss_pred             CcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCccccee
Q 024553          170 GVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYF  223 (266)
Q Consensus       170 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~  223 (266)
                      |+|.|++..........     ..+.+++.+|+|+|+.+++++..+  ..+..+
T Consensus       177 G~v~t~~~~~~~~~~~~-----~~~~~~~~~p~dvA~~i~~l~~~~--~~~~~~  223 (245)
T 3e9n_A          177 GPTNTPMLQGLMDSQGT-----NFRPEIYIEPKEIANAIRFVIDAG--ETTQIT  223 (245)
T ss_dssp             CCC---------------------CCGGGSCHHHHHHHHHHHHTSC--TTEEEE
T ss_pred             CCccCchhhhhhhhhhc-----ccccccCCCHHHHHHHHHHHHcCC--Ccccee
Confidence            99999987764332211     112345679999999999665443  344444

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.88  E-value=2e-22  Score=168.89  Aligned_cols=165  Identities=19%  Similarity=0.203  Sum_probs=134.5

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEc-CCCCC-CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINN-AGILA-TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~n-AG~~~-~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++.++.||+++.++++++++++.+      .++++|+|||| ||... +..+.+.+++++++++|+.|++.+++.++|.
T Consensus        78 ~~~~~~~~Dl~d~~~v~~~~~~~~~------~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  151 (286)
T 1xu9_A           78 ASAHYIAGTMEDMTFAEQFVAQAGK------LMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPM  151 (286)
T ss_dssp             SEEEEEECCTTCHHHHHHHHHHHHH------HHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CceEEEeCCCCCHHHHHHHHHHHHH------HcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            4789999999999999999999988      45799999999 57653 3345678889999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhh--CCCCCCCeEEEE
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNL--GLDKSRHVSVIA  166 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~--~~~~~~~i~v~~  166 (266)
                      |+++  .++||++||..+.                    .+.++...|+++|++++.++++++.++  .   ..+|+++.
T Consensus       152 ~~~~--~g~iv~isS~~~~--------------------~~~~~~~~Y~asK~a~~~~~~~l~~e~~~~---~~~i~v~~  206 (286)
T 1xu9_A          152 LKQS--NGSIVVVSSLAGK--------------------VAYPMVAAYSASKFALDGFFSSIRKEYSVS---RVNVSITL  206 (286)
T ss_dssp             HHHH--TCEEEEEEEGGGT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHHHH---TCCCEEEE
T ss_pred             HHHC--CCEEEEECCcccc--------------------cCCCCccHHHHHHHHHHHHHHHHHHHHhhc---CCCeEEEE
Confidence            8764  4899999998873                    245667889999999999999999998  4   57999999


Q ss_pred             ecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC
Q 024553          167 ADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP  215 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~  215 (266)
                      ++||+++|++........         ......+|+++|+.++.++..+
T Consensus       207 v~Pg~v~t~~~~~~~~~~---------~~~~~~~~~~vA~~i~~~~~~~  246 (286)
T 1xu9_A          207 CVLGLIDTETAMKAVSGI---------VHMQAAPKEECALEIIKGGALR  246 (286)
T ss_dssp             EEECCBCCHHHHHHSCGG---------GGGGCBCHHHHHHHHHHHHHTT
T ss_pred             eecCccCChhHHHhcccc---------ccCCCCCHHHHHHHHHHHHhcC
Confidence            999999998754211100         0113459999999999776543

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.84  E-value=7.3e-21  Score=151.14  Aligned_cols=161  Identities=14%  Similarity=0.151  Sum_probs=128.7

Q ss_pred             EEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcC
Q 024553           15 AFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS   92 (266)
Q Consensus        15 ~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~   92 (266)
                      ++.+|+++.++++++++++          +++|+||||||...  +..+.+.++|++++++|+.+++.+++.+.+.|++ 
T Consensus        38 ~~~~D~~~~~~~~~~~~~~----------~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-  106 (202)
T 3d7l_A           38 DVTVDITNIDSIKKMYEQV----------GKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND-  106 (202)
T ss_dssp             SEECCTTCHHHHHHHHHHH----------CCEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE-
T ss_pred             ceeeecCCHHHHHHHHHHh----------CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc-
Confidence            3689999999999988754          57999999999763  3456678899999999999999999999999865 


Q ss_pred             CCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcc
Q 024553           93 PVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVV  172 (266)
Q Consensus        93 ~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v  172 (266)
                        +++||++||..+.                    .+.+....|+.+|++++.+++.++.++    +.+|+++.+.||++
T Consensus       107 --~~~iv~~sS~~~~--------------------~~~~~~~~Y~~sK~~~~~~~~~~~~e~----~~gi~v~~v~pg~v  160 (202)
T 3d7l_A          107 --KGSFTLTTGIMME--------------------DPIVQGASAAMANGAVTAFAKSAAIEM----PRGIRINTVSPNVL  160 (202)
T ss_dssp             --EEEEEEECCGGGT--------------------SCCTTCHHHHHHHHHHHHHHHHHTTSC----STTCEEEEEEECCB
T ss_pred             --CCEEEEEcchhhc--------------------CCCCccHHHHHHHHHHHHHHHHHHHHc----cCCeEEEEEecCcc
Confidence              4799999998763                    345667889999999999999999987    37999999999999


Q ss_pred             cCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceee
Q 024553          173 KTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFF  224 (266)
Q Consensus       173 ~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~  224 (266)
                      .|++.....          ..+...+.+|+++|+.++.++  ....+|..|.
T Consensus       161 ~~~~~~~~~----------~~~~~~~~~~~dva~~~~~~~--~~~~~G~~~~  200 (202)
T 3d7l_A          161 EESWDKLEP----------FFEGFLPVPAAKVARAFEKSV--FGAQTGESYQ  200 (202)
T ss_dssp             GGGHHHHGG----------GSTTCCCBCHHHHHHHHHHHH--HSCCCSCEEE
T ss_pred             CCchhhhhh----------hccccCCCCHHHHHHHHHHhh--hccccCceEe
Confidence            998642100          012235679999999998655  3455676554

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.84  E-value=3.2e-21  Score=190.61  Aligned_cols=183  Identities=16%  Similarity=0.100  Sum_probs=137.7

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCC-----CC-CcceeeEcCCCCC---CCCcCC--CcccchhhhhhhhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDM-----HS-SIQLLINNAGILA---TSSRLT--PEGYDQMMSTNYIGA   78 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~-----~~-~ld~lv~nAG~~~---~~~~~~--~~~~~~~~~~n~~~~   78 (266)
                      +.++.++.||+++.++++++++++.+      .     ++ +||+||||||+..   +..+.+  .++|+++|++|+.++
T Consensus       729 g~~v~~v~~DVsd~~sV~alv~~i~~------~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~  802 (1887)
T 2uv8_A          729 GSTLIVVPFNQGSKQDVEALIEFIYD------TEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRM  802 (1887)
T ss_dssp             TCEEEEEECCTTCHHHHHHHHHHHHS------CTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHH
T ss_pred             CCeEEEEEecCCCHHHHHHHHHHHHH------hccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHH
Confidence            45799999999999999999999987      5     45 8999999999873   445666  789999999999999


Q ss_pred             HHHHHhh--HHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHH-HHHHHHhhC
Q 024553           79 FFLTKLL--LPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIF-SYELHRNLG  155 (266)
Q Consensus        79 ~~l~~~~--~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~-~~~la~~~~  155 (266)
                      +.+++.+  +|.|++++ .++||++||..+..                      ++...|++||+++..| ++.++.++.
T Consensus       803 ~~l~~a~~~lp~m~~~~-~G~IVnISS~ag~~----------------------gg~~aYaASKAAL~~Lttr~lA~ela  859 (1887)
T 2uv8_A          803 MGCVKKQKSARGIETRP-AQVILPMSPNHGTF----------------------GGDGMYSESKLSLETLFNRWHSESWA  859 (1887)
T ss_dssp             HHHHHHHHHTTTCCSCC-EEEEEEECSCTTCS----------------------SCBTTHHHHHHHGGGHHHHHHHSSCT
T ss_pred             HHHHHHHHhhhhhhhCC-CCEEEEEcChHhcc----------------------CCCchHHHHHHHHHHHHHHHHHHHhC
Confidence            9999988  78887765 68999999988632                      1456899999999999 899999986


Q ss_pred             CCCCCCeEEEEecCCccc-CCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCC----cccceeec--CCC
Q 024553          156 LDKSRHVSVIAADPGVVK-TNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPE----TSGVYFFG--GKG  228 (266)
Q Consensus       156 ~~~~~~i~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~----~~G~~~~~--~~g  228 (266)
                         +. |+||+|+||+|+ |++...........   ...++ +..+|+++|..++  ++.++.    .+|..+..  ++|
T Consensus       860 ---~~-IrVNaV~PG~V~tT~m~~~~~~~~~~~---~~~pl-r~~sPEEVA~avl--fLaSd~~as~iTGq~I~VDVDGG  929 (1887)
T 2uv8_A          860 ---NQ-LTVCGAIIGWTRGTGLMSANNIIAEGI---EKMGV-RTFSQKEMAFNLL--GLLTPEVVELCQKSPVMADLNGG  929 (1887)
T ss_dssp             ---TT-EEEEEEEECCEECC-----CCTTHHHH---HTTSC-CCEEHHHHHHHHH--GGGSHHHHHHHHHSCEEEEESCS
T ss_pred             ---CC-eEEEEEEecccccccccccchhHHHHH---HhcCC-CCCCHHHHHHHHH--HHhCCCccccccCcEEEEECCCC
Confidence               55 999999999999 78865421111111   11112 4459999999999  455543    35776643  355


Q ss_pred             ccc
Q 024553          229 RTV  231 (266)
Q Consensus       229 ~~~  231 (266)
                      ...
T Consensus       930 ~~~  932 (1887)
T 2uv8_A          930 LQF  932 (1887)
T ss_dssp             TTT
T ss_pred             eec
Confidence            433

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.83  E-value=3.2e-21  Score=158.42  Aligned_cols=199  Identities=16%  Similarity=0.063  Sum_probs=137.8

Q ss_pred             EEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCCC
Q 024553           16 FQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVP   95 (266)
Q Consensus        16 i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~   95 (266)
                      +.+|+++.++++++++++         .+++|+||||||...+     .+.+++++++|+.+++.+++.+++.|++.+ .
T Consensus        42 ~~~D~~~~~~~~~~~~~~---------~~~~d~vi~~Ag~~~~-----~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~  106 (255)
T 2dkn_A           42 LSTPGGRETAVAAVLDRC---------GGVLDGLVCCAGVGVT-----AANSGLVVAVNYFGVSALLDGLAEALSRGQ-Q  106 (255)
T ss_dssp             TTSHHHHHHHHHHHHHHH---------TTCCSEEEECCCCCTT-----SSCHHHHHHHHTHHHHHHHHHHHHHHHTSS-S
T ss_pred             ccCCcccHHHHHHHHHHc---------CCCccEEEECCCCCCc-----chhHHHHHHHHhHHHHHHHHHHHHHhhhcC-C
Confidence            468899988888888754         1579999999998642     345899999999999999999999998765 6


Q ss_pred             CeEEEEcCCcccccccccCCcc-ccccCccc-----CCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           96 SRIVNVTSFTHRNVFNAQVNNE-TITGKFFL-----RSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        96 ~~iv~vsS~~~~~~~~~~~~~~-~~~~~~~~-----~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      ++||++||..+........... .....+..     .....++...|+.+|++++.+++.++.++.   ..+++++.++|
T Consensus       107 ~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~---~~gi~v~~v~p  183 (255)
T 2dkn_A          107 PAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWA---GRGVRLNVVAP  183 (255)
T ss_dssp             CEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHH---HTTCEEEEEEE
T ss_pred             ceEEEEeccccccccccccchhhhhcccchhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHh---hcCcEEEEEcC
Confidence            8999999988753210000000 00000000     000114567899999999999999999986   67999999999


Q ss_pred             CcccCCccCcchhHHHHHHHHHHH--HhhcCCCHHHHHHHHHHHhcCC-CCcccceeecCCCcccc
Q 024553          170 GVVKTNIMREVPSFLSLMAFTVLK--LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  232 (266)
Q Consensus       170 G~v~T~~~~~~~~~~~~~~~~~~~--~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~~~~~g~~~~  232 (266)
                      |++.|++.................  +.+++.+|+++|+.+++++..+ ...+|.+|..++|....
T Consensus       184 g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~  249 (255)
T 2dkn_A          184 GAVETPLLQASKADPRYGESTRRFVAPLGRGSEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDAL  249 (255)
T ss_dssp             CCBCSHHHHHHHHCTTTHHHHHSCCCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHH
T ss_pred             CcccchhhhhcccchhhHHHHHHHHHHhcCCCCHHHHHHHHHHHhCCCcccceeeEEEecCCeEee
Confidence            999998765431110000000000  4456789999999999766543 24578888878876654

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.83  E-value=1.7e-21  Score=187.27  Aligned_cols=183  Identities=16%  Similarity=0.098  Sum_probs=139.3

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCC-----CC-CcceeeEcCCCCC---CCCcCC--CcccchhhhhhhhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDM-----HS-SIQLLINNAGILA---TSSRLT--PEGYDQMMSTNYIGA   78 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~-----~~-~ld~lv~nAG~~~---~~~~~~--~~~~~~~~~~n~~~~   78 (266)
                      +.++.++.||+++.++++++++++.+      .     ++ ++|+||||||+..   +..+.+  .++|+++|++|+.++
T Consensus       530 Ga~V~vV~~DVTD~esVeaLVe~I~e------~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~  603 (1688)
T 2pff_A          530 GSTLIVVPFNQGSKQDVEALIEFIYD------TEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRM  603 (1688)
T ss_dssp             TCEEEEEECCSSSTTHHHHHHHHHHS------CTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHH
T ss_pred             CCeEEEEEeCCCCHHHHHHHHHHHHH------hccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHH
Confidence            45799999999999999999999987      5     56 8999999999863   445666  789999999999999


Q ss_pred             HHHHHhh--HHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHH-HHHHHHhhC
Q 024553           79 FFLTKLL--LPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIF-SYELHRNLG  155 (266)
Q Consensus        79 ~~l~~~~--~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~-~~~la~~~~  155 (266)
                      +.+++.+  +|.|++++ .++||++||.++..                      ++...|++||+++..+ ++.++.++.
T Consensus       604 ~~Ltqaa~~lp~M~krg-gGrIVnISSiAG~~----------------------Gg~saYaASKAAL~aLttrsLAeEla  660 (1688)
T 2pff_A          604 MGCVKKQKSARGIETRP-AQVILPMSPNHGTF----------------------GGDGMYSESKLSLETLFNRWHSESWA  660 (1688)
T ss_dssp             HHHHHHHHHHHTCTTSC-EEECCCCCSCTTTS----------------------SCBTTHHHHHHHHTHHHHHTTTSSCT
T ss_pred             HHHHHHHHhChHHHhCC-CCEEEEEEChHhcc----------------------CCchHHHHHHHHHHHHHHHHHHHHcC
Confidence            9999998  78887765 68999999988632                      1456899999999999 788888886


Q ss_pred             CCCCCCeEEEEecCCccc-CCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCC----cccceeecC--CC
Q 024553          156 LDKSRHVSVIAADPGVVK-TNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPE----TSGVYFFGG--KG  228 (266)
Q Consensus       156 ~~~~~~i~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~----~~G~~~~~~--~g  228 (266)
                         +. |+||+|+||+|+ |++...........   ...++ +..+|+++|+.+++  +.++.    .+|..+..+  +|
T Consensus       661 ---~~-IRVNaVaPG~V~TT~M~~~~e~~~~~l---~~ipl-R~~sPEEVA~aIlF--LaSd~sAs~ITGq~I~VDVDGG  730 (1688)
T 2pff_A          661 ---NQ-LTVCGAIIGWTRGTGLMSANNIIAEGI---EKMGV-RTFSQKEMAFNLLG--LLTPEVVELCQKSPVMADLNGG  730 (1688)
T ss_dssp             ---TT-EECCCCCCCCCCCCSSSCTTTTCSTTT---SSSSC-CCCCCCTTHHHHHH--HTSTTHHHHHTTSCCCCCCSCS
T ss_pred             ---CC-eEEEEEEECcCcCCcccCCchHHHHHH---HhCCC-CCCCHHHHHHHHHH--HhCCCccccccCcEEEEEcCCC
Confidence               44 999999999999 78765311100000   00111 34599999999994  44444    257776543  55


Q ss_pred             ccc
Q 024553          229 RTV  231 (266)
Q Consensus       229 ~~~  231 (266)
                      ...
T Consensus       731 ~~~  733 (1688)
T 2pff_A          731 LQF  733 (1688)
T ss_dssp             GGG
T ss_pred             eee
Confidence            443

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.83  E-value=2.9e-20  Score=148.09  Aligned_cols=153  Identities=16%  Similarity=0.178  Sum_probs=122.5

Q ss_pred             EEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           14 EAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        14 ~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      .++.+|+++.+++++++++  -        +++|+||||||...  +..+.+.+++++++++|+.+++.+++.+    ++
T Consensus        45 ~~~~~D~~~~~~~~~~~~~--~--------~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~  110 (207)
T 2yut_A           45 RALPADLADELEAKALLEE--A--------GPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHA----RF  110 (207)
T ss_dssp             EECCCCTTSHHHHHHHHHH--H--------CSEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHC----CE
T ss_pred             cEEEeeCCCHHHHHHHHHh--c--------CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH----Hh
Confidence            7889999999999998876  2        58999999999863  3456788899999999999999999998    33


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCc
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV  171 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~  171 (266)
                      .+ .++||++||..+..                    +.++...|+.+|++++.++++++.++.   +.+|+++.+.||+
T Consensus       111 ~~-~~~iv~~sS~~~~~--------------------~~~~~~~Y~~sK~a~~~~~~~~~~~~~---~~gi~v~~v~pg~  166 (207)
T 2yut_A          111 QK-GARAVFFGAYPRYV--------------------QVPGFAAYAAAKGALEAYLEAARKELL---REGVHLVLVRLPA  166 (207)
T ss_dssp             EE-EEEEEEECCCHHHH--------------------SSTTBHHHHHHHHHHHHHHHHHHHHHH---TTTCEEEEECCCC
T ss_pred             cC-CcEEEEEcChhhcc--------------------CCCCcchHHHHHHHHHHHHHHHHHHHh---hhCCEEEEEecCc
Confidence            33 58999999988643                    445667899999999999999999997   7899999999999


Q ss_pred             ccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC
Q 024553          172 VKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP  215 (266)
Q Consensus       172 v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~  215 (266)
                      +.|++.....           .+.+++.+|+++|+.+++++..+
T Consensus       167 v~t~~~~~~~-----------~~~~~~~~~~dva~~~~~~~~~~  199 (207)
T 2yut_A          167 VATGLWAPLG-----------GPPKGALSPEEAARKVLEGLFRE  199 (207)
T ss_dssp             BCSGGGGGGT-----------SCCTTCBCHHHHHHHHHHHHC--
T ss_pred             ccCCCccccC-----------CCCCCCCCHHHHHHHHHHHHhCC
Confidence            9998743211           12245679999999999766443

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.81  E-value=4.3e-20  Score=182.33  Aligned_cols=183  Identities=15%  Similarity=0.092  Sum_probs=138.1

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCC---CC-CcceeeEcCCCCC---CCCcCC--CcccchhhhhhhhhHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDM---HS-SIQLLINNAGILA---TSSRLT--PEGYDQMMSTNYIGAFF   80 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~---~~-~ld~lv~nAG~~~---~~~~~~--~~~~~~~~~~n~~~~~~   80 (266)
                      +.++.++.||+++.++++++++++.+      .   ++ +||+||||||+..   +..+.+  .++|+++|++|+.|++.
T Consensus       706 G~~v~~v~~DVsd~esV~alv~~i~~------~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~  779 (1878)
T 2uv9_A          706 GSQLVVVPFNQGSKQDVEALVNYIYD------TKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLG  779 (1878)
T ss_dssp             TCEEEEEECCTTCHHHHHHHHHHHHC------SSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHH
T ss_pred             CCeEEEEEcCCCCHHHHHHHHHHHHH------hhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHH
Confidence            45799999999999999999999987      5   67 8999999999863   456667  78999999999999999


Q ss_pred             HHHh--hHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHh-hCCC
Q 024553           81 LTKL--LLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRN-LGLD  157 (266)
Q Consensus        81 l~~~--~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~-~~~~  157 (266)
                      +++.  +++.|++++ .++||++||..+..                      ++...|+++|+++..|++.++.+ +.  
T Consensus       780 l~~a~~~lp~M~~~~-~G~IVnISS~ag~~----------------------gg~~aYaASKAAL~aLt~~laAeEla--  834 (1878)
T 2uv9_A          780 AIKTQKKERGYETRP-AQVILPLSPNHGTF----------------------GNDGLYSESKLALETLFNRWYSESWG--  834 (1878)
T ss_dssp             HHHHHHHHHTCCSCC-EEECCEECSCSSSS----------------------SCCSSHHHHHHHHTTHHHHHHHSTTT--
T ss_pred             HHHHHHHhHHHHhCC-CCEEEEEcchhhcc----------------------CCchHHHHHHHHHHHHHHHHHHHHcC--
Confidence            9977  678887665 68999999988632                      13567999999999998876554 65  


Q ss_pred             CCCCeEEEEecCCccc-CCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCC----cccceeec--CCCcc
Q 024553          158 KSRHVSVIAADPGVVK-TNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPE----TSGVYFFG--GKGRT  230 (266)
Q Consensus       158 ~~~~i~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~----~~G~~~~~--~~g~~  230 (266)
                       +. |+||+|+||+++ |++.........   .....++ +..+|+++|..++++  .++.    .+|..+..  ++|..
T Consensus       835 -~~-IrVNaVaPG~V~gT~m~~~~~~~~~---~~~~~pl-r~~sPeEVA~avlfL--aSd~a~s~iTGq~I~VDVDGG~~  906 (1878)
T 2uv9_A          835 -NY-LTICGAVIGWTRGTGLMSANNLVAE---GVEKLGV-RTFSQQEMAFNLLGL--MAPAIVNLCQSDPVFADLNGGLQ  906 (1878)
T ss_dssp             -TT-EEEEEEEECCBCCTTSCSHHHHTHH---HHHTTTC-CCBCHHHHHHHHHHH--HSHHHHHHHTTSCEEEEESCSGG
T ss_pred             -CC-eEEEEEEecceecCcccccchhhHH---HHHhcCC-CCCCHHHHHHHHHHH--hCCcccccccCcEEEEEcCCCcc
Confidence             44 999999999999 998754111010   1111122 445999999999954  3432    35776543  35543


Q ss_pred             c
Q 024553          231 V  231 (266)
Q Consensus       231 ~  231 (266)
                      .
T Consensus       907 ~  907 (1878)
T 2uv9_A          907 F  907 (1878)
T ss_dssp             G
T ss_pred             c
Confidence            3

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.81  E-value=9.2e-20  Score=164.37  Aligned_cols=167  Identities=11%  Similarity=0.051  Sum_probs=131.4

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.+++.++++++.+       +++||+||||||+..  +..+.+.++|+++|++|+.|++++.+.+.+
T Consensus       314 g~~v~~~~~Dvtd~~~v~~~~~~i~~-------~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~  386 (525)
T 3qp9_A          314 GATATVVTCDLTDAEAAARLLAGVSD-------AHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLRE  386 (525)
T ss_dssp             TCEEEEEECCTTSHHHHHHHHHTSCT-------TSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEEECCCCCHHHHHHHHHHHHh-------cCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            45799999999999999999998863       479999999999873  566788999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .+++++..++||++||+++.                    .+.++...|+++|++++.|+    .++.   ..+|++++|
T Consensus       387 ~~~~~~~~~~iV~~SS~a~~--------------------~g~~g~~~YaaaKa~l~~lA----~~~~---~~gi~v~sI  439 (525)
T 3qp9_A          387 AAAAGGRPPVLVLFSSVAAI--------------------WGGAGQGAYAAGTAFLDALA----GQHR---ADGPTVTSV  439 (525)
T ss_dssp             TC----CCCEEEEEEEGGGT--------------------TCCTTCHHHHHHHHHHHHHH----TSCC---SSCCEEEEE
T ss_pred             ccccCCCCCEEEEECCHHHc--------------------CCCCCCHHHHHHHHHHHHHH----HHHH---hCCCCEEEE
Confidence            98765435799999999874                    35677889999999998874    5665   679999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP  215 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~  215 (266)
                      +||+++|+|...........     ..-....+|+++++.+.+++...
T Consensus       440 ~pG~~~tgm~~~~~~~~~~~-----~~g~~~l~pee~a~~l~~~l~~~  482 (525)
T 3qp9_A          440 AWSPWEGSRVTEGATGERLR-----RLGLRPLAPATALTALDTALGHG  482 (525)
T ss_dssp             EECCBTTSGGGSSHHHHHHH-----HTTBCCBCHHHHHHHHHHHHHHT
T ss_pred             ECCccccccccchhhHHHHH-----hcCCCCCCHHHHHHHHHHHHhCC
Confidence            99999999875422211111     11113459999999999776543

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.71  E-value=7.4e-18  Score=150.50  Aligned_cols=164  Identities=16%  Similarity=0.101  Sum_probs=124.5

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC---CCCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      +.++.++.||+++.+++.++++++.+      . +++|+||||||+.   .+..+.+.+.|+++|++|+.|.+++.+.+.
T Consensus       291 g~~v~~~~~Dvtd~~~v~~~~~~i~~------~-g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~  363 (496)
T 3mje_A          291 GVRVTIAACDAADREALAALLAELPE------D-APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTA  363 (496)
T ss_dssp             TCEEEEEECCTTCHHHHHHHHHTCCT------T-SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHT
T ss_pred             CCeEEEEEccCCCHHHHHHHHHHHHH------h-CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence            46899999999999999999998876      4 7899999999986   346678899999999999999999998876


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      +.    . .++||++||.++..                    +.++...|+++|+++..|++.++       ..+|++++
T Consensus       364 ~~----~-~~~iV~~SS~a~~~--------------------g~~g~~~YaAaKa~ldala~~~~-------~~Gi~v~s  411 (496)
T 3mje_A          364 DL----D-LDAFVLFSSGAAVW--------------------GSGGQPGYAAANAYLDALAEHRR-------SLGLTASS  411 (496)
T ss_dssp             TS----C-CSEEEEEEEHHHHT--------------------TCTTCHHHHHHHHHHHHHHHHHH-------HTTCCCEE
T ss_pred             cc----C-CCEEEEEeChHhcC--------------------CCCCcHHHHHHHHHHHHHHHHHH-------hcCCeEEE
Confidence            54    2 57999999988743                    56677899999999998887532       46899999


Q ss_pred             ecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC
Q 024553          167 ADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP  216 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~  216 (266)
                      |+||.+.+..+.........+   ....+ ...+|++++..+.+++...+
T Consensus       412 V~pG~w~~~gm~~~~~~~~~l---~~~g~-~~l~pe~~~~~l~~~l~~~~  457 (496)
T 3mje_A          412 VAWGTWGEVGMATDPEVHDRL---VRQGV-LAMEPEHALGALDQMLENDD  457 (496)
T ss_dssp             EEECEESSSCC------CHHH---HHTTE-EEECHHHHHHHHHHHHHHTC
T ss_pred             EECCcccCCccccChHHHHHH---HhcCC-CCCCHHHHHHHHHHHHcCCC
Confidence            999988766543321111111   01111 23499999999987665443

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.71  E-value=8.2e-18  Score=158.44  Aligned_cols=162  Identities=21%  Similarity=0.155  Sum_probs=124.8

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      .+ +||+||||||+..  ++.+++.++|+++|++|+.|++++.+.+.|
T Consensus       583 G~~v~~~~~Dvsd~~~v~~~~~~~~~------~~-~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~  655 (795)
T 3slk_A          583 GAEVSLQACDVADRETLAKVLASIPD------EH-PLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP  655 (795)
T ss_dssp             TCEEEEEECCTTCHHHHHHHHHTSCT------TS-CEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT
T ss_pred             CCcEEEEEeecCCHHHHHHHHHHHHH------hC-CCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            56899999999999999999999876      54 8999999999973  567889999999999999999999999976


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|       +||++||.++..                    +.++...|+++|+    |+++|++++.   ..||++++|
T Consensus       656 ~l-------~iV~~SS~ag~~--------------------g~~g~~~YaAaka----~~~alA~~~~---~~Gi~v~sI  701 (795)
T 3slk_A          656 DV-------ALVLFSSVSGVL--------------------GSGGQGNYAAANS----FLDALAQQRQ---SRGLPTRSL  701 (795)
T ss_dssp             TS-------EEEEEEETHHHH--------------------TCSSCHHHHHHHH----HHHHHHHHHH---HTTCCEEEE
T ss_pred             CC-------EEEEEccHHhcC--------------------CCCCCHHHHHHHH----HHHHHHHHHH---HcCCeEEEE
Confidence            65       899999998743                    5677889999996    5566666665   679999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA  214 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~  214 (266)
                      +||++.|..+........ ........+ ...+++++...+..++..
T Consensus       702 ~pG~v~t~g~~~~~~~~~-~~~~~~~g~-~~l~~~e~~~~~~~~l~~  746 (795)
T 3slk_A          702 AWGPWAEHGMASTLREAE-QDRLARSGL-LPISTEEGLSQFDAACGG  746 (795)
T ss_dssp             EECCCSCCCHHHHHHHHH-HHHHHHTTB-CCCCHHHHHHHHHHHHTS
T ss_pred             ECCeECcchhhccccHHH-HHHHHhcCC-CCCCHHHHHHHHHHHHhC
Confidence            999999876433211111 111111111 235888888888755544

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.68  E-value=2.5e-16  Score=162.84  Aligned_cols=174  Identities=15%  Similarity=0.071  Sum_probs=124.6

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC-------CCCCcCCCcccchh----hhhhhhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL-------ATSSRLTPEGYDQM----MSTNYIGA   78 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~-------~~~~~~~~~~~~~~----~~~n~~~~   78 (266)
                      +.++.++.||+++.++++++++++.+....  .+|++|+||||||+.       ......+.++|+..    +++|+.+.
T Consensus      2190 G~~~~~v~~Dvtd~~~v~~lv~~i~~~~~~--~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~ 2267 (3089)
T 3zen_D         2190 DATLWVVPANMASYSDIDKLVEWVGTEQTE--SLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAV 2267 (3089)
T ss_dssp             TCEEEEEECCTTCHHHHHHHHHHHTSCCEE--EESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHH
T ss_pred             CCeEEEEEecCCCHHHHHHHHHHHHhhhhh--hcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHH
Confidence            457899999999999999999999751100  248999999999982       12334466777777    99999999


Q ss_pred             HHHHHhhHHHHhcCCCCC--eEEE-EcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHh--
Q 024553           79 FFLTKLLLPLLKNSPVPS--RIVN-VTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRN--  153 (266)
Q Consensus        79 ~~l~~~~~~~l~~~~~~~--~iv~-vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~--  153 (266)
                      +.+++.+.+.|+..+..+  .++. .++..+                      .+.+..+|++||+++..|+++++.+  
T Consensus      2268 ~~l~~~~~~~m~~~~~g~~~~ii~~~ss~~g----------------------~~g~~~aYsASKaAl~~LtrslA~E~~ 2325 (3089)
T 3zen_D         2268 QRLISGLSKIGAERDIASRLHVVLPGSPNRG----------------------MFGGDGAYGEAKSALDALENRWSAEKS 2325 (3089)
T ss_dssp             HHHHHHHHHHHHHTTCCCCEEEEEEECSSTT----------------------SCSSCSSHHHHGGGHHHHHHHHHHCST
T ss_pred             HHHHHHHHHHHHHcCCCceeEEEEECCcccc----------------------cCCCchHHHHHHHHHHHHHHHHHhccc
Confidence            999999999998764111  2333 333222                      2234457999999999999999999  


Q ss_pred             hCCCCCCCeEEEEecCCccc-CCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCC
Q 024553          154 LGLDKSRHVSVIAADPGVVK-TNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPE  217 (266)
Q Consensus       154 ~~~~~~~~i~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~  217 (266)
                      ++    ++|+||+++||+|+ |++...........   ...+. +..+|+|+|..++  +|+++.
T Consensus      2326 ~a----~~IrVn~v~PG~v~tT~l~~~~~~~~~~~---~~~~~-r~~~PeEIA~avl--fLaS~~ 2380 (3089)
T 3zen_D         2326 WA----ERVSLAHALIGWTKGTGLMGQNDAIVSAV---EEAGV-TTYTTDEMAAMLL--DLCTVE 2380 (3089)
T ss_dssp             TT----TTEEEEEEECCCEECSTTTTTTTTTHHHH---GGGSC-BCEEHHHHHHHHH--HTTSHH
T ss_pred             cC----CCeEEEEEeecccCCCcccccchhHHHHH---HhcCC-CCCCHHHHHHHHH--HHhChh
Confidence            64    67999999999998 77665422211111   11112 3348999999999  677654

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.67  E-value=4.8e-15  Score=122.61  Aligned_cols=163  Identities=15%  Similarity=0.057  Sum_probs=120.1

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .++.++.+|+++.++++++++             ++|+||||||..      +.+.|++++++|+.|++.+++.+.+   
T Consensus        43 ~~~~~~~~Dl~d~~~~~~~~~-------------~~D~vi~~Ag~~------~~~~~~~~~~~N~~g~~~l~~a~~~---  100 (267)
T 3rft_A           43 PNEECVQCDLADANAVNAMVA-------------GCDGIVHLGGIS------VEKPFEQILQGNIIGLYNLYEAARA---  100 (267)
T ss_dssp             TTEEEEECCTTCHHHHHHHHT-------------TCSEEEECCSCC------SCCCHHHHHHHHTHHHHHHHHHHHH---
T ss_pred             CCCEEEEcCCCCHHHHHHHHc-------------CCCEEEECCCCc------CcCCHHHHHHHHHHHHHHHHHHHHH---
Confidence            578999999999999988772             689999999983      4567899999999999999999943   


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                       .+ .++||++||..++...+..        ....+..+..+...|+.+|.+.+.+++.++.++      +++++.|.||
T Consensus       101 -~~-~~~iv~~SS~~~~g~~~~~--------~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~~~------g~~~~~vr~~  164 (267)
T 3rft_A          101 -HG-QPRIVFASSNHTIGYYPQT--------ERLGPDVPARPDGLYGVSKCFGENLARMYFDKF------GQETALVRIG  164 (267)
T ss_dssp             -TT-CCEEEEEEEGGGGTTSBTT--------SCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCCEEEEEEC
T ss_pred             -cC-CCEEEEEcchHHhCCCCCC--------CCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh------CCeEEEEEee
Confidence             33 6799999998775321111        111223455566789999999999999999885      5678888888


Q ss_pred             cccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceee
Q 024553          171 VVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFF  224 (266)
Q Consensus       171 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~  224 (266)
                      .|.++.......             ..+.+++++++.+..++..++...+.++.
T Consensus       165 ~v~~~~~~~~~~-------------~~~~~~~d~a~~~~~~~~~~~~~~~~~~~  205 (267)
T 3rft_A          165 SCTPEPNNYRML-------------STWFSHDDFVSLIEAVFRAPVLGCPVVWG  205 (267)
T ss_dssp             BCSSSCCSTTHH-------------HHBCCHHHHHHHHHHHHHCSCCCSCEEEE
T ss_pred             cccCCCCCCCce-------------eeEEcHHHHHHHHHHHHhCCCCCceEEEE
Confidence            888775443211             12348999999988766555444444444

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.60  E-value=9.4e-15  Score=124.55  Aligned_cols=198  Identities=10%  Similarity=-0.007  Sum_probs=137.9

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC---C------------CC--------cC----
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA---T------------SS--------RL----   62 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~---~------------~~--------~~----   62 (266)
                      +.++..+.||+++.++++++++++++      .+|+||+||||+|...   +            ..        +.    
T Consensus       111 G~~a~~i~~Dv~d~e~i~~vi~~i~~------~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~  184 (401)
T 4ggo_A          111 GLYSVTIDGDAFSDEIKAQVIEEAKK------KGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGE  184 (401)
T ss_dssp             TCCEEEEESCTTSHHHHHHHHHHHHH------TTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCC
T ss_pred             CCCceeEeCCCCCHHHHHHHHHHHHH------hcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccc
Confidence            55789999999999999999999999      7899999999999751   1            00        00    


Q ss_pred             ---------CCc---ccchhhhhhhhhHHHHHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCC
Q 024553           63 ---------TPE---GYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCY  130 (266)
Q Consensus        63 ---------~~~---~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (266)
                               +.+   +....|....++.+...+...++|.+   +++++.+|++.+                    ...+
T Consensus       185 i~~~~l~pat~eeie~T~~vMg~s~~s~w~~al~~a~lla~---G~siva~SYiGs--------------------e~t~  241 (401)
T 4ggo_A          185 LKEISAEPANDEEAAATVKVMGGEDWERWIKQLSKEGLLEE---GCITLAYSYIGP--------------------EATQ  241 (401)
T ss_dssp             EEEEEECCCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEE---EEEEEEEECCCC--------------------GGGH
T ss_pred             cccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHhhhcccC---CceEEEEeccCc--------------------ceee
Confidence                     111   12234455566667777777777765   689999999875                    2344


Q ss_pred             Chh--hcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcccCCccCcchhHH--HHHHHHHHHHhhcCCCHHHHHH
Q 024553          131 PCA--RIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL--SLMAFTVLKLLGLLQSPEKGIN  206 (266)
Q Consensus       131 ~~~--~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~--~~~~~~~~~~~~~~~~p~~~a~  206 (266)
                      +.+  ..++.+|++++..+++|+.++.     +++++++.||.+.|......|..-  -...+..++..   ++.|.+.+
T Consensus       242 P~Y~~G~mG~AKaaLEa~~r~La~eL~-----~~~a~v~v~~a~vT~AssaIP~~ply~~~l~kvmk~~---g~heg~ie  313 (401)
T 4ggo_A          242 ALYRKGTIGKAKEHLEATAHRLNKENP-----SIRAFVSVNKGLVTRASAVIPVIPLYLASLFKVMKEK---GNHEGCIE  313 (401)
T ss_dssp             HHHTTSHHHHHHHHHHHHHHHHHHHCT-----TEEEEEEECCCCCCTTGGGSSSHHHHHHHHHHHHHHH---TCCCCHHH
T ss_pred             cCCCccHHHHHHHHHHHHHHHHHHhcC-----CCcEEEEEcCccccchhhcCCCchHHHHHHHHHHHhc---CCCCchHH
Confidence            443  3689999999999999999984     589999999999999887765321  22223333333   47788888


Q ss_pred             HHHHHhcCCCCcc-cceeecCCCccccCCccccCHHHHHH
Q 024553          207 SVLDAALAPPETS-GVYFFGGKGRTVNSSALSFNSKLAGE  245 (266)
Q Consensus       207 ~~~~~~~~~~~~~-G~~~~~~~g~~~~~~~~~~~~~~~~~  245 (266)
                      .+.+++...-... |..-..+.|+ +..++|-.+++.+.+
T Consensus       314 q~~rl~~~~ly~~~~~~~~D~~~r-~r~d~~el~~~vq~~  352 (401)
T 4ggo_A          314 QITRLYAERLYRKDGTIPVDEENR-IRIDDWELEEDVQKA  352 (401)
T ss_dssp             HHHHHHHHTTSCTTCCCCCCTTSC-EESCTTTTCHHHHHH
T ss_pred             HHHHHHHHhhccCCCCCCcCCCCC-ccCchhhcCHHHHHH
Confidence            8887775432222 2221223344 667788888877644

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.59  E-value=1.5e-15  Score=135.76  Aligned_cols=161  Identities=17%  Similarity=0.088  Sum_probs=119.0

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.+++.++++++ .      ..+++|+||||||+..  +..+.+.+.+++++++|+.|++++.+.+.+
T Consensus       278 g~~v~~~~~Dv~d~~~v~~~~~~i-~------~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~  350 (486)
T 2fr1_A          278 GARTTVAACDVTDRESVRELLGGI-G------DDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRE  350 (486)
T ss_dssp             TCEEEEEECCTTCHHHHHHHHHTS-C------TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEEEeCCCCHHHHHHHHHHH-H------hcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCc
Confidence            457999999999999999999988 3      4589999999999874  345778899999999999999999987744


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                          .+ .++||++||..+..                    +.++...|+++|++++.+++.++       ..++++++|
T Consensus       351 ----~~-~~~~V~~SS~a~~~--------------------g~~g~~~Yaaaka~l~~la~~~~-------~~gi~v~~i  398 (486)
T 2fr1_A          351 ----LD-LTAFVLFSSFASAF--------------------GAPGLGGYAPGNAYLDGLAQQRR-------SDGLPATAV  398 (486)
T ss_dssp             ----SC-CSEEEEEEEHHHHT--------------------CCTTCTTTHHHHHHHHHHHHHHH-------HTTCCCEEE
T ss_pred             ----CC-CCEEEEEcChHhcC--------------------CCCCCHHHHHHHHHHHHHHHHHH-------hcCCeEEEE
Confidence                23 68999999987633                    44566789999999998876432       358999999


Q ss_pred             cCCcccCC-ccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC
Q 024553          168 DPGVVKTN-IMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP  215 (266)
Q Consensus       168 ~PG~v~T~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~  215 (266)
                      +||.+.++ +..... .. .    ....-....+|+++++.+..++...
T Consensus       399 ~pG~~~~~gm~~~~~-~~-~----~~~~g~~~i~~e~~a~~l~~~l~~~  441 (486)
T 2fr1_A          399 AWGTWAGSGMAEGPV-AD-R----FRRHGVIEMPPETACRALQNALDRA  441 (486)
T ss_dssp             EECCBC------------------CTTTTEECBCHHHHHHHHHHHHHTT
T ss_pred             ECCeeCCCcccchhH-HH-H----HHhcCCCCCCHHHHHHHHHHHHhCC
Confidence            99999876 322110 00 0    0000012469999999999776543

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.58  E-value=3.5e-14  Score=122.20  Aligned_cols=200  Identities=11%  Similarity=0.044  Sum_probs=133.3

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .++.++.+|+++.+++.+++++           .++|+||||||...  ...+.+++++.+++|+.++..+++.+.+.|.
T Consensus        50 ~~~~~~~~Dl~d~~~~~~~~~~-----------~~~d~vih~A~~~~--~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~  116 (361)
T 1kew_A           50 NRYNFEHADICDSAEITRIFEQ-----------YQPDAVMHLAAESH--VDRSITGPAAFIETNIVGTYALLEVARKYWS  116 (361)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHH-----------HCCSEEEECCSCCC--HHHHHHCTHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             CCeEEEECCCCCHHHHHHHHhh-----------cCCCEEEECCCCcC--hhhhhhCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            4689999999999999888754           26899999999853  2234467889999999999999999999875


Q ss_pred             cCC----CCCeEEEEcCCcccccccc--cC-CccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeE
Q 024553           91 NSP----VPSRIVNVTSFTHRNVFNA--QV-NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVS  163 (266)
Q Consensus        91 ~~~----~~~~iv~vsS~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~  163 (266)
                      ...    .+++||++||...+.....  .. ...+.  ....+..+..+...|+.+|.+.+.+++.++.++      +++
T Consensus       117 ~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~--~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------gi~  188 (361)
T 1kew_A          117 ALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTL--PLFTETTAYAPSSPYSASKASSDHLVRAWRRTY------GLP  188 (361)
T ss_dssp             TSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCC--CCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCC
T ss_pred             CcccccccCceEEEeCCHHHhCCCcccccccccccC--CCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh------CCc
Confidence            311    0259999999765432110  00 00000  011223344556789999999999999998875      688


Q ss_pred             EEEecCCcccCCccCcchhHHHHHHHHHHH-H---------hhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCccccC
Q 024553          164 VIAADPGVVKTNIMREVPSFLSLMAFTVLK-L---------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNS  233 (266)
Q Consensus       164 v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~---------~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~~  233 (266)
                      ++.+.||.|.++..........+....... +         ...+..++++|++++.++..+  ..|..|..++|+.+.+
T Consensus       189 ~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~--~~g~~~~v~~~~~~s~  266 (361)
T 1kew_A          189 TIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEG--KAGETYNIGGHNEKKN  266 (361)
T ss_dssp             EEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC--CTTCEEEECCCCEEEH
T ss_pred             EEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCCceeEeeEEHHHHHHHHHHHHhCC--CCCCEEEecCCCeeeH
Confidence            999999999998754211111111111110 0         113457999999999766432  4676777677776543

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.58  E-value=1.2e-14  Score=130.51  Aligned_cols=158  Identities=15%  Similarity=0.146  Sum_probs=121.5

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.+++.+++++           +++|+||||||+..  +..+.+.+.++.++++|+.|.+++.+.+.+
T Consensus       311 g~~v~~~~~Dvtd~~~v~~~~~~-----------~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~  379 (511)
T 2z5l_A          311 GCEVVHAACDVAERDALAALVTA-----------YPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTAD  379 (511)
T ss_dssp             TCEEEEEECCSSCHHHHHHHHHH-----------SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSS
T ss_pred             CCEEEEEEeCCCCHHHHHHHHhc-----------CCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            45799999999999999888764           47999999999874  345678899999999999999999887743


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      . +  + .++||++||..+.                    .+.++...|+++|++++.+++.+    .   ..++++++|
T Consensus       380 ~-~--~-~~~~V~~SS~a~~--------------------~g~~g~~~YaaaKa~ld~la~~~----~---~~gi~v~sv  428 (511)
T 2z5l_A          380 I-K--G-LDAFVLFSSVTGT--------------------WGNAGQGAYAAANAALDALAERR----R---AAGLPATSV  428 (511)
T ss_dssp             C-T--T-CCCEEEEEEGGGT--------------------TCCTTBHHHHHHHHHHHHHHHHH----H---TTTCCCEEE
T ss_pred             c-c--C-CCEEEEEeCHHhc--------------------CCCCCCHHHHHHHHHHHHHHHHH----H---HcCCcEEEE
Confidence            2 1  2 5799999998863                    24566788999999999998754    2   468999999


Q ss_pred             cCCcc-cCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC
Q 024553          168 DPGVV-KTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP  215 (266)
Q Consensus       168 ~PG~v-~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~  215 (266)
                      +||++ .|.+...... ...    . ..-....+|+++++.+..++...
T Consensus       429 ~pG~~~~tgm~~~~~~-~~~----~-~~g~~~l~~e~~a~~l~~al~~~  471 (511)
T 2z5l_A          429 AWGLWGGGGMAAGAGE-ESL----S-RRGLRAMDPDAAVDALLGAMGRN  471 (511)
T ss_dssp             EECCBCSTTCCCCHHH-HHH----H-HHTBCCBCHHHHHHHHHHHHHHT
T ss_pred             ECCcccCCcccccccH-HHH----H-hcCCCCCCHHHHHHHHHHHHhCC
Confidence            99998 7877655211 111    0 11113569999999999776543

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.57  E-value=9.7e-14  Score=117.49  Aligned_cols=189  Identities=11%  Similarity=-0.017  Sum_probs=129.7

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      .+.++.+|+++.+++.++++.           +++|+||||||....  ..+.+++++.+++|+.++..+++.+ +.+. 
T Consensus        52 ~~~~~~~Dl~d~~~~~~~~~~-----------~~~d~vih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~-  116 (321)
T 2pk3_A           52 NVEMISLDIMDSQRVKKVISD-----------IKPDYIFHLAAKSSV--KDSWLNKKGTFSTNVFGTLHVLDAV-RDSN-  116 (321)
T ss_dssp             TEEEEECCTTCHHHHHHHHHH-----------HCCSEEEECCSCCCH--HHHTTCHHHHHHHHHHHHHHHHHHH-HHHT-
T ss_pred             eeeEEECCCCCHHHHHHHHHh-----------cCCCEEEEcCcccch--hhhhhcHHHHHHHHHHHHHHHHHHH-HHhC-
Confidence            478899999999999887753           258999999998532  2345678999999999999999999 5553 


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCc
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV  171 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~  171 (266)
                       + .++||++||...+.....       ......+..+..+...|+.+|.+.+.+++.++.++      +++++.+.||.
T Consensus       117 -~-~~~iv~~SS~~v~g~~~~-------~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~------gi~~~ilrp~~  181 (321)
T 2pk3_A          117 -L-DCRILTIGSSEEYGMILP-------EESPVSEENQLRPMSPYGVSKASVGMLARQYVKAY------GMDIIHTRTFN  181 (321)
T ss_dssp             -C-CCEEEEEEEGGGTBSCCG-------GGCSBCTTSCCBCCSHHHHHHHHHHHHHHHHHHHH------CCEEEEEEECE
T ss_pred             -C-CCeEEEEccHHhcCCCCC-------CCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHc------CCCEEEEEeCc
Confidence             2 579999999876542100       01111223344556789999999999999988774      78999999999


Q ss_pred             ccCCccCcchhHHHHHHHHHH---H---H---------hhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          172 VKTNIMREVPSFLSLMAFTVL---K---L---------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       172 v~T~~~~~~~~~~~~~~~~~~---~---~---------~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      +.++..........+......   .   +         ...+..++++|++++.++..+  ..|..|..++|+.+.
T Consensus       182 v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~--~~g~~~~i~~~~~~s  255 (321)
T 2pk3_A          182 HIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYG--KTGDVYNVCSGIGTR  255 (321)
T ss_dssp             EECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHHHC--CTTCEEEESCSCEEE
T ss_pred             ccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHhCC--CCCCeEEeCCCCCee
Confidence            998876532111111111111   0   0         112468999999999766544  346666666666554

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.55  E-value=1.7e-13  Score=116.72  Aligned_cols=186  Identities=12%  Similarity=0.050  Sum_probs=128.1

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .++.++.+|+++.+++.+++    .         ++|+||||||...  ...+.+++++.+++|+.++..+++.+.+.  
T Consensus        54 ~~~~~~~~Dl~d~~~~~~~~----~---------~~d~vih~A~~~~--~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~--  116 (336)
T 2hun_A           54 PRYTFVKGDVADYELVKELV----R---------KVDGVVHLAAESH--VDRSISSPEIFLHSNVIGTYTLLESIRRE--  116 (336)
T ss_dssp             TTEEEEECCTTCHHHHHHHH----H---------TCSEEEECCCCCC--HHHHHHCTHHHHHHHHHHHHHHHHHHHHH--
T ss_pred             CceEEEEcCCCCHHHHHHHh----h---------CCCEEEECCCCcC--hhhhhhCHHHHHHHHHHHHHHHHHHHHHh--
Confidence            46889999999999888776    2         5899999999853  12234568899999999999999999876  


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                      . . .++||++||...+.....         ....+..+..+...|+.+|.+.+.+++.++.++      +++++.+.||
T Consensus       117 ~-~-~~~iv~~SS~~vyg~~~~---------~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------~~~~~ilrp~  179 (336)
T 2hun_A          117 N-P-EVRFVHVSTDEVYGDILK---------GSFTENDRLMPSSPYSATKAASDMLVLGWTRTY------NLNASITRCT  179 (336)
T ss_dssp             C-T-TSEEEEEEEGGGGCCCSS---------SCBCTTBCCCCCSHHHHHHHHHHHHHHHHHHHT------TCEEEEEEEC
T ss_pred             C-C-CcEEEEeccHHHHCCCCC---------CCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh------CCCEEEEeee
Confidence            1 1 479999999875432110         011122244456789999999999999988774      6899999999


Q ss_pred             cccCCccCcchhHHHHHHHHHH----------HHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          171 VVKTNIMREVPSFLSLMAFTVL----------KLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       171 ~v~T~~~~~~~~~~~~~~~~~~----------~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      .+.++..........+......          .....+..++++|++++.++..+  ..|..|..++|+.+.
T Consensus       180 ~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~--~~g~~~~v~~~~~~s  249 (336)
T 2hun_A          180 NNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKG--ESREIYNISAGEEKT  249 (336)
T ss_dssp             EEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHC--CTTCEEEECCSCEEC
T ss_pred             eeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCC--CCCCEEEeCCCCccc
Confidence            9999875321100111111000          01123557999999999765432  357667767776654

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.52  E-value=1.9e-13  Score=116.85  Aligned_cols=195  Identities=12%  Similarity=0.005  Sum_probs=129.4

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      ++.++.+|+++.+++.++++..           ++|+|||+||....  ..+.+++++.+++|+.++..+++.+.+... 
T Consensus        51 ~~~~~~~Dl~d~~~~~~~~~~~-----------~~d~vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-  116 (347)
T 1orr_A           51 NFEFVHGDIRNKNDVTRLITKY-----------MPDSCFHLAGQVAM--TTSIDNPCMDFEINVGGTLNLLEAVRQYNS-  116 (347)
T ss_dssp             CCEEEECCTTCHHHHHHHHHHH-----------CCSEEEECCCCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT-
T ss_pred             ceEEEEcCCCCHHHHHHHHhcc-----------CCCEEEECCcccCh--hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-
Confidence            5889999999999998877542           58999999997531  223456889999999999999999987652 


Q ss_pred             CCCCCeEEEEcCCcccccccccC------Ccccc-ccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEE
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQV------NNETI-TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSV  164 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~------~~~~~-~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v  164 (266)
                         .++||++||.+.+.......      .+... ......+..+..+...|+.+|.+.+.+++.++.++      ++++
T Consensus       117 ---~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~------gi~~  187 (347)
T 1orr_A          117 ---NCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF------GLNT  187 (347)
T ss_dssp             ---TCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH------CCEE
T ss_pred             ---CceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh------CCcE
Confidence               36999999987654211100      00000 00001122334456789999999999999998874      6899


Q ss_pred             EEecCCcccCCccCcchh---HHHHHHHHH-HH-----Hhh---------cCCCHHHHHHHHHHHhcCCCCcccceeecC
Q 024553          165 IAADPGVVKTNIMREVPS---FLSLMAFTV-LK-----LLG---------LLQSPEKGINSVLDAALAPPETSGVYFFGG  226 (266)
Q Consensus       165 ~~v~PG~v~T~~~~~~~~---~~~~~~~~~-~~-----~~~---------~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~  226 (266)
                      +.+.||+|.++.......   ...+..... ..     ++.         .+..++++|++++.++..++...|..|..+
T Consensus       188 ~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~  267 (347)
T 1orr_A          188 VVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIG  267 (347)
T ss_dssp             EEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEES
T ss_pred             EEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhccccCCCCEEEeC
Confidence            999999999987543211   111111111 11     121         145899999999976653234567777766


Q ss_pred             CCc
Q 024553          227 KGR  229 (266)
Q Consensus       227 ~g~  229 (266)
                      +|.
T Consensus       268 ~~~  270 (347)
T 1orr_A          268 GTI  270 (347)
T ss_dssp             SCG
T ss_pred             CCC
Confidence            665

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.48  E-value=1.4e-13  Score=118.00  Aligned_cols=169  Identities=17%  Similarity=0.195  Sum_probs=120.1

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      ..++.++.+|+++.+++.+++             .++|+|||+||.....  ......++.+++|+.|+..+++++.+. 
T Consensus        69 ~~~v~~~~~Dl~d~~~l~~~~-------------~~~D~Vih~Aa~~~~~--~~~~~~~~~~~~Nv~gt~~l~~aa~~~-  132 (344)
T 2gn4_A           69 DPRMRFFIGDVRDLERLNYAL-------------EGVDICIHAAALKHVP--IAEYNPLECIKTNIMGASNVINACLKN-  132 (344)
T ss_dssp             CTTEEEEECCTTCHHHHHHHT-------------TTCSEEEECCCCCCHH--HHHHSHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             CCCEEEEECCCCCHHHHHHHH-------------hcCCEEEECCCCCCCC--chhcCHHHHHHHHHHHHHHHHHHHHhC-
Confidence            347899999999998887655             2689999999986311  122345789999999999999999764 


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                         + .++||++||..+.                       .+...|+.+|.+.+.++++++.++.   ..+++++.+.|
T Consensus       133 ---~-v~~~V~~SS~~~~-----------------------~p~~~Y~~sK~~~E~~~~~~~~~~~---~~g~~~~~vRp  182 (344)
T 2gn4_A          133 ---A-ISQVIALSTDKAA-----------------------NPINLYGATKLCSDKLFVSANNFKG---SSQTQFSVVRY  182 (344)
T ss_dssp             ---T-CSEEEEECCGGGS-----------------------SCCSHHHHHHHHHHHHHHHGGGCCC---SSCCEEEEECC
T ss_pred             ---C-CCEEEEecCCccC-----------------------CCccHHHHHHHHHHHHHHHHHHHhC---CCCcEEEEEEe
Confidence               2 5799999997641                       2246799999999999999998876   68999999999


Q ss_pred             CcccCCccCcchhHHHHHHHHH--H-----HHhhcCCCHHHHHHHHHHHhcCCCCcccceeecC
Q 024553          170 GVVKTNIMREVPSFLSLMAFTV--L-----KLLGLLQSPEKGINSVLDAALAPPETSGVYFFGG  226 (266)
Q Consensus       170 G~v~T~~~~~~~~~~~~~~~~~--~-----~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~  226 (266)
                      |.|.++.....+..........  .     ...+.+.+++++|+.++.++..+  ..|..|...
T Consensus       183 g~v~g~~~~~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l~~~--~~g~~~~~~  244 (344)
T 2gn4_A          183 GNVVGSRGSVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRM--HGGEIFVPK  244 (344)
T ss_dssp             CEETTCTTSHHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHHHHC--CSSCEEEEC
T ss_pred             ccEECCCCCHHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHHhhc--cCCCEEecC
Confidence            9999876432221111110000  0     00123568999999999776553  346566533

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.47  E-value=4.9e-12  Score=108.11  Aligned_cols=188  Identities=13%  Similarity=0.045  Sum_probs=124.7

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .++.++.+|+++.+++.++++..           ++|+|||+||....  ..+.++.++.+++|+.++..+++.+...  
T Consensus        75 ~~~~~~~~Dl~d~~~~~~~~~~~-----------~~d~Vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~ll~a~~~~--  139 (346)
T 4egb_A           75 PNYYFVKGEIQNGELLEHVIKER-----------DVQVIVNFAAESHV--DRSIENPIPFYDTNVIGTVTLLELVKKY--  139 (346)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHH-----------TCCEEEECCCCC-----------CHHHHHHTHHHHHHHHHHHHS--
T ss_pred             CCeEEEEcCCCCHHHHHHHHhhc-----------CCCEEEECCcccch--hhhhhCHHHHHHHHHHHHHHHHHHHHhc--
Confidence            47899999999999998888643           58999999998642  2245667899999999999999888543  


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                        + .+++|++||...+.....        .....+..+..+...|+.+|.+.+.+++.++.+.      ++.++.+.||
T Consensus       140 --~-~~~~v~~SS~~vy~~~~~--------~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~------g~~~~ilRp~  202 (346)
T 4egb_A          140 --P-HIKLVQVSTDEVYGSLGK--------TGRFTEETPLAPNSPYSSSKASADMIALAYYKTY------QLPVIVTRCS  202 (346)
T ss_dssp             --T-TSEEEEEEEGGGGCCCCS--------SCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCCEEEEEEC
T ss_pred             --C-CCEEEEeCchHHhCCCCc--------CCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh------CCCEEEEeec
Confidence              3 568999999876543210        0112223344556789999999999999988774      6789999999


Q ss_pred             cccCCccCcchhHHHHHHHHHH-HHh---h------cCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          171 VVKTNIMREVPSFLSLMAFTVL-KLL---G------LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       171 ~v~T~~~~~~~~~~~~~~~~~~-~~~---~------~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      .+.++..........+...... .++   +      .+..++++|++++.++..+.  .|..|+.++++.+.
T Consensus       203 ~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~--~g~~~~i~~~~~~s  272 (346)
T 4egb_A          203 NNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGR--VGEVYNIGGNNEKT  272 (346)
T ss_dssp             EEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCC--TTCEEEECCSCCEE
T ss_pred             ceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCC--CCCEEEECCCCcee
Confidence            9988765321111111111100 001   1      12458999999997666544  67667666776554

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.47  E-value=2e-12  Score=109.04  Aligned_cols=184  Identities=12%  Similarity=0.018  Sum_probs=126.1

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      ..+.++.+|+++ +++.+++             ..+|+|||+||..  ....+.+++++.+++|+.++..+++.+..   
T Consensus        43 ~~~~~~~~Dl~~-~~~~~~~-------------~~~d~vih~a~~~--~~~~~~~~~~~~~~~nv~~~~~l~~~~~~---  103 (313)
T 3ehe_A           43 EAARLVKADLAA-DDIKDYL-------------KGAEEVWHIAANP--DVRIGAENPDEIYRNNVLATYRLLEAMRK---  103 (313)
T ss_dssp             TTEEEECCCTTT-SCCHHHH-------------TTCSEEEECCCCC--CCC-CCCCHHHHHHHHHHHHHHHHHHHHH---
T ss_pred             CCcEEEECcCCh-HHHHHHh-------------cCCCEEEECCCCC--ChhhhhhCHHHHHHHHHHHHHHHHHHHHH---
Confidence            458899999998 7776655             2689999999964  23456778999999999999999988643   


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                       .+ .++||++||...+.....         ....+..+..+...|+.+|.+.+.+++.++.++      +++++.+.|+
T Consensus       104 -~~-~~~iv~~SS~~vyg~~~~---------~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------g~~~~ilRp~  166 (313)
T 3ehe_A          104 -AG-VSRIVFTSTSTVYGEAKV---------IPTPEDYPTHPISLYGASKLACEALIESYCHTF------DMQAWIYRFA  166 (313)
T ss_dssp             -HT-CCEEEEECCGGGGCSCSS---------SSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHT------TCEEEEEECS
T ss_pred             -cC-CCeEEEeCchHHhCcCCC---------CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc------CCCEEEEeec
Confidence             23 569999999876542211         111223345556789999999999999998874      7899999999


Q ss_pred             cccCCccCcchhHHHHHHHHHHH--Hh---------hcCCCHHHHHHHHHHHhcCCCCcccceeecCCCccccC
Q 024553          171 VVKTNIMREVPSFLSLMAFTVLK--LL---------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNS  233 (266)
Q Consensus       171 ~v~T~~~~~~~~~~~~~~~~~~~--~~---------~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~~  233 (266)
                      .+.++....... ..+.......  ++         ..+..++|+|++++.++.  +...|..|+.++|+.+.+
T Consensus       167 ~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~--~~~~~~~~ni~~~~~~s~  237 (313)
T 3ehe_A          167 NVIGRRSTHGVI-YDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLR--GDERVNIFNIGSEDQIKV  237 (313)
T ss_dssp             CEESTTCCCSHH-HHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTT--CCSSEEEEECCCSCCEEH
T ss_pred             cccCcCCCcChH-HHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhc--cCCCCceEEECCCCCeeH
Confidence            998876543111 1111111110  11         124578999999996554  444566667677776653

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.44  E-value=1.8e-12  Score=110.44  Aligned_cols=185  Identities=12%  Similarity=0.036  Sum_probs=125.6

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .++.++.+|+++.+++.+++             .++|+|||+||....  ..+.+++++.+++|+.++..+++.+.+.  
T Consensus        55 ~~~~~~~~Dl~d~~~~~~~~-------------~~~d~Vih~A~~~~~--~~~~~~~~~~~~~Nv~~~~~l~~a~~~~--  117 (337)
T 1r6d_A           55 PRLRFVHGDIRDAGLLAREL-------------RGVDAIVHFAAESHV--DRSIAGASVFTETNVQGTQTLLQCAVDA--  117 (337)
T ss_dssp             TTEEEEECCTTCHHHHHHHT-------------TTCCEEEECCSCCCH--HHHHHCCHHHHHHHTHHHHHHHHHHHHT--
T ss_pred             CCeEEEEcCCCCHHHHHHHh-------------cCCCEEEECCCccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHHc--
Confidence            46889999999998877655             368999999997531  2234567899999999999999998764  


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                        + .++||++||...+.....         ....+..+..+...|+.+|.+.+.+++.++.++      +++++.+.||
T Consensus       118 --~-~~~~v~~SS~~vyg~~~~---------~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------g~~~~ilrp~  179 (337)
T 1r6d_A          118 --G-VGRVVHVSTNQVYGSIDS---------GSWTESSPLEPNSPYAASKAGSDLVARAYHRTY------GLDVRITRCC  179 (337)
T ss_dssp             --T-CCEEEEEEEGGGGCCCSS---------SCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCCEEEEEEC
T ss_pred             --C-CCEEEEecchHHhCCCCC---------CCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHH------CCCEEEEEee
Confidence              2 469999999876432110         011122344456789999999999999988775      6789999999


Q ss_pred             cccCCccCcchhHHHHHHHHHHH-H---------hhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          171 VVKTNIMREVPSFLSLMAFTVLK-L---------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       171 ~v~T~~~~~~~~~~~~~~~~~~~-~---------~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      .+.++..........+....... +         ...+..++++|++++.++..+  ..|..|..++++.+.
T Consensus       180 ~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~--~~g~~~~v~~~~~~s  249 (337)
T 1r6d_A          180 NNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGG--RAGEIYHIGGGLELT  249 (337)
T ss_dssp             EEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC--CTTCEEEECCCCEEE
T ss_pred             eeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCC--CCCCEEEeCCCCCcc
Confidence            99888753211111111111000 0         012457899999999766543  356666666766554

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.44  E-value=3.2e-12  Score=109.31  Aligned_cols=193  Identities=12%  Similarity=0.055  Sum_probs=127.0

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .++.++.+|+++.+++.++++             .+|+|||+||....  ..+.+++++.+++|+.++..+++.+.+.  
T Consensus        54 ~~~~~~~~Dl~d~~~~~~~~~-------------~~d~vih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~l~~a~~~~--  116 (348)
T 1oc2_A           54 DRVELVVGDIADAELVDKLAA-------------KADAIVHYAAESHN--DNSLNDPSPFIHTNFIGTYTLLEAARKY--  116 (348)
T ss_dssp             SSEEEEECCTTCHHHHHHHHT-------------TCSEEEECCSCCCH--HHHHHCCHHHHHHHTHHHHHHHHHHHHH--
T ss_pred             CCeEEEECCCCCHHHHHHHhh-------------cCCEEEECCcccCc--cchhhCHHHHHHHHHHHHHHHHHHHHHh--
Confidence            468899999999988877652             46999999998531  2234567899999999999999999775  


Q ss_pred             cCCCCCeEEEEcCCccccccccc-C--CccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQ-V--NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                        +  ++||++||...+...... .  ...........+..+..+...|+.+|.+.+.+++.++.++      +++++.+
T Consensus       117 --~--~~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------gi~~~il  186 (348)
T 1oc2_A          117 --D--IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF------GVKATIS  186 (348)
T ss_dssp             --T--CEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCEEEEE
T ss_pred             --C--CeEEEecccceeCCCcccccccccccccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh------CCCEEEE
Confidence              2  399999998754321100 0  0000000112223344556789999999999999988874      6899999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHH-H---------hhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLK-L---------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~-~---------~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      .||.+.++..........+....... +         ...+..++++|++++.++..+  ..|..|..++|..+.
T Consensus       187 rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~--~~g~~~~i~~~~~~s  259 (348)
T 1oc2_A          187 NCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKG--RMGETYLIGADGEKN  259 (348)
T ss_dssp             EECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHHC--CTTCEEEECCSCEEE
T ss_pred             eeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHHHhhCC--CCCCeEEeCCCCCCC
Confidence            99999988753211111111111100 0         113457999999999766433  357666666666554

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.44  E-value=5.4e-13  Score=113.83  Aligned_cols=193  Identities=10%  Similarity=0.064  Sum_probs=125.6

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .++.++.+|+++.+++.++++.+           ++|+||||||...  ...+.+++++.+++|+.++..+++.+... .
T Consensus        52 ~~~~~~~~Dl~d~~~~~~~~~~~-----------~~d~vih~A~~~~--~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~  117 (345)
T 2z1m_A           52 NDVKIIHMDLLEFSNIIRTIEKV-----------QPDEVYNLAAQSF--VGVSFEQPILTAEVDAIGVLRILEALRTV-K  117 (345)
T ss_dssp             TTEEECCCCTTCHHHHHHHHHHH-----------CCSEEEECCCCCC--HHHHTTSHHHHHHHHTHHHHHHHHHHHHH-C
T ss_pred             CceeEEECCCCCHHHHHHHHHhc-----------CCCEEEECCCCcc--hhhhhhCHHHHHHHHHHHHHHHHHHHHHh-C
Confidence            36889999999999998887644           4899999999853  22345678999999999999999999752 1


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                      .   .++||++||...+.....         ....+..+..+...|+.+|.+.+.+++.++.++.......+.++.+.||
T Consensus       118 ~---~~~iv~~SS~~vyg~~~~---------~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg  185 (345)
T 2z1m_A          118 P---DTKFYQASTSEMFGKVQE---------IPQTEKTPFYPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPL  185 (345)
T ss_dssp             T---TCEEEEEEEGGGGCSCSS---------SSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTT
T ss_pred             C---CceEEEEechhhcCCCCC---------CCCCccCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCC
Confidence            1   379999999876542211         0111233445567899999999999999998864200124566778898


Q ss_pred             cccCCccCcchhHHHHHHHHHHH--H------hhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          171 VVKTNIMREVPSFLSLMAFTVLK--L------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       171 ~v~T~~~~~~~~~~~~~~~~~~~--~------~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      .+.|.+.................  .      ...+..++|+|++++.++..+.  .|.|.. +.|+.+.
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~~--~~~~~i-~~~~~~s  252 (345)
T 2z1m_A          186 RGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQPE--PDDYVI-ATGETHT  252 (345)
T ss_dssp             SCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSSS--CCCEEE-CCSCCEE
T ss_pred             CCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCCC--CceEEE-eCCCCcc
Confidence            87766532211111000000000  0      0125689999999997664432  355544 5555554

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.44  E-value=2.2e-12  Score=110.70  Aligned_cols=187  Identities=10%  Similarity=-0.028  Sum_probs=127.3

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .++.++.+|+++.+++.++++             ++|+|||+||.....  .+.+++++.+++|+.++..+++.+.+.  
T Consensus        81 ~~~~~~~~Dl~d~~~~~~~~~-------------~~d~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~~--  143 (352)
T 1sb8_A           81 SNFKFIQGDIRNLDDCNNACA-------------GVDYVLHQAALGSVP--RSINDPITSNATNIDGFLNMLIAARDA--  143 (352)
T ss_dssp             TTEEEEECCTTSHHHHHHHHT-------------TCSEEEECCSCCCHH--HHHHCHHHHHHHHTHHHHHHHHHHHHT--
T ss_pred             CceEEEECCCCCHHHHHHHhc-------------CCCEEEECCcccCch--hhhhCHHHHHHHHHHHHHHHHHHHHHc--
Confidence            468899999999988877662             689999999975321  234568899999999999999988652  


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                        + .++||++||...+......         ...+..+..+...|+.+|.+.+.+++.++.++      +++++.+.||
T Consensus       144 --~-~~~~v~~SS~~~~~~~~~~---------~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------g~~~~ilRp~  205 (352)
T 1sb8_A          144 --K-VQSFTYAASSSTYGDHPGL---------PKVEDTIGKPLSPYAVTKYVNELYADVFSRCY------GFSTIGLRYF  205 (352)
T ss_dssp             --T-CSEEEEEEEGGGGTTCCCS---------SBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH------CCCCEEEEEC
T ss_pred             --C-CCEEEEeccHHhcCCCCCC---------CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc------CCCEEEEEEC
Confidence              3 5799999998875432110         11122233445689999999999999988774      6789999999


Q ss_pred             cccCCccCcch---hHH-HHHHHHHH-HHh---------hcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          171 VVKTNIMREVP---SFL-SLMAFTVL-KLL---------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       171 ~v~T~~~~~~~---~~~-~~~~~~~~-~~~---------~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      .+.++......   ... .+...... .++         ..+..++++|++++.++...+...|..|..++|+.+.
T Consensus       206 ~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s  281 (352)
T 1sb8_A          206 NVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQVYNIAVGGRTS  281 (352)
T ss_dssp             CEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEE
T ss_pred             ceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhccccCCCceEEeCCCCCcc
Confidence            99988654310   111 11111110 011         1245799999999876655334456666666666554

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.43  E-value=4.1e-12  Score=104.76  Aligned_cols=161  Identities=16%  Similarity=0.090  Sum_probs=113.9

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      .+.++.+|+++.+++.+++             ..+|+||||||..      +.+.+++.+++|+.++..+++.+.+    
T Consensus        43 ~~~~~~~Dl~d~~~~~~~~-------------~~~d~vi~~a~~~------~~~~~~~~~~~n~~~~~~l~~a~~~----   99 (267)
T 3ay3_A           43 HEEIVACDLADAQAVHDLV-------------KDCDGIIHLGGVS------VERPWNDILQANIIGAYNLYEAARN----   99 (267)
T ss_dssp             TEEECCCCTTCHHHHHHHH-------------TTCSEEEECCSCC------SCCCHHHHHHHTHHHHHHHHHHHHH----
T ss_pred             CccEEEccCCCHHHHHHHH-------------cCCCEEEECCcCC------CCCCHHHHHHHHHHHHHHHHHHHHH----
Confidence            4788999999998887765             2589999999985      3456789999999999999998854    


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCc
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV  171 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~  171 (266)
                      .+ .++||++||..++...+..        ....+..+..+...|+.+|.+.+.+++.++.+      .+++++.+.||+
T Consensus       100 ~~-~~~iv~~SS~~~~~~~~~~--------~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~------~gi~~~~lrp~~  164 (267)
T 3ay3_A          100 LG-KPRIVFASSNHTIGYYPRT--------TRIDTEVPRRPDSLYGLSKCFGEDLASLYYHK------FDIETLNIRIGS  164 (267)
T ss_dssp             TT-CCEEEEEEEGGGSTTSBTT--------SCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHT------TCCCEEEEEECB
T ss_pred             hC-CCEEEEeCCHHHhCCCCCC--------CCCCCCCCCCCCChHHHHHHHHHHHHHHHHHH------cCCCEEEEecee
Confidence            23 5799999998765422111        01112223344568999999999999887643      589999999999


Q ss_pred             cc-CCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceee
Q 024553          172 VK-TNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFF  224 (266)
Q Consensus       172 v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~  224 (266)
                      +. ++..    ..          ....+.+++++|+.++.++..+....+.|+.
T Consensus       165 v~~~~~~----~~----------~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~  204 (267)
T 3ay3_A          165 CFPKPKD----AR----------MMATWLSVDDFMRLMKRAFVAPKLGCTVVYG  204 (267)
T ss_dssp             CSSSCCS----HH----------HHHHBCCHHHHHHHHHHHHHSSCCCEEEEEE
T ss_pred             ecCCCCC----CC----------eeeccccHHHHHHHHHHHHhCCCCCceeEec
Confidence            83 4321    10          1123569999999999777655433344443

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.43  E-value=2.5e-13  Score=110.38  Aligned_cols=156  Identities=12%  Similarity=0.020  Sum_probs=106.1

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      .+.++.+|+++.+++.+++             .++|+||||||....     .+++++.+++|+.++..+++.+.    +
T Consensus        64 ~~~~~~~D~~d~~~~~~~~-------------~~~d~vi~~ag~~~~-----~~~~~~~~~~n~~~~~~~~~~~~----~  121 (242)
T 2bka_A           64 NVNQEVVDFEKLDDYASAF-------------QGHDVGFCCLGTTRG-----KAGAEGFVRVDRDYVLKSAELAK----A  121 (242)
T ss_dssp             GCEEEECCGGGGGGGGGGG-------------SSCSEEEECCCCCHH-----HHHHHHHHHHHTHHHHHHHHHHH----H
T ss_pred             CceEEecCcCCHHHHHHHh-------------cCCCEEEECCCcccc-----cCCcccceeeeHHHHHHHHHHHH----H
Confidence            5788999999998876544             368999999997532     12467899999999988888753    3


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCe-EEEEecCC
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHV-SVIAADPG  170 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i-~v~~v~PG  170 (266)
                      .+ .++||++||..++.                      +....|+.+|.+++.+++.    +      ++ +++.+.||
T Consensus       122 ~~-~~~iv~~SS~~~~~----------------------~~~~~Y~~sK~~~e~~~~~----~------~~~~~~~vrpg  168 (242)
T 2bka_A          122 GG-CKHFNLLSSKGADK----------------------SSNFLYLQVKGEVEAKVEE----L------KFDRYSVFRPG  168 (242)
T ss_dssp             TT-CCEEEEECCTTCCT----------------------TCSSHHHHHHHHHHHHHHT----T------CCSEEEEEECC
T ss_pred             CC-CCEEEEEccCcCCC----------------------CCcchHHHHHHHHHHHHHh----c------CCCCeEEEcCc
Confidence            33 57999999987631                      1235699999999988753    2      34 89999999


Q ss_pred             cccCCccCcchhHHHHHHHHHHHH----hhcCCCHHHHHHHHHHHhcCCCCccccee
Q 024553          171 VVKTNIMREVPSFLSLMAFTVLKL----LGLLQSPEKGINSVLDAALAPPETSGVYF  223 (266)
Q Consensus       171 ~v~T~~~~~~~~~~~~~~~~~~~~----~~~~~~p~~~a~~~~~~~~~~~~~~G~~~  223 (266)
                      ++.|+..................+    .+++.+|+++|+.+++++..+ ...|.++
T Consensus       169 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~-~~~~~~~  224 (242)
T 2bka_A          169 VLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRP-RDKQMEL  224 (242)
T ss_dssp             EEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSC-CCSSEEE
T ss_pred             eecCCCCCCcHHHHHHHHhhcccCccccCCcccCHHHHHHHHHHHHhCc-cccCeeE
Confidence            999987533211110000000001    235679999999999665443 3334443

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.41  E-value=5.5e-12  Score=108.29  Aligned_cols=192  Identities=13%  Similarity=0.033  Sum_probs=125.8

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .++.++.+|+++.+++.++++.+           ++|+|||+||...  ...+.+++++.+++|+.++..+++.+.+.  
T Consensus        57 ~~~~~~~~Dl~d~~~~~~~~~~~-----------~~d~vih~A~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--  121 (357)
T 1rkx_A           57 DGMQSEIGDIRDQNKLLESIREF-----------QPEIVFHMAAQPL--VRLSYSEPVETYSTNVMGTVYLLEAIRHV--  121 (357)
T ss_dssp             TTSEEEECCTTCHHHHHHHHHHH-----------CCSEEEECCSCCC--HHHHHHCHHHHHHHHTHHHHHHHHHHHHH--
T ss_pred             CceEEEEccccCHHHHHHHHHhc-----------CCCEEEECCCCcc--cccchhCHHHHHHHHHHHHHHHHHHHHHh--
Confidence            36789999999999988887643           4899999999732  22345668899999999999999999763  


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCC---CCCCeEEEEe
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLD---KSRHVSVIAA  167 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~---~~~~i~v~~v  167 (266)
                       .. .++||++||...+......        ....+..+..+...|+.+|.+.+.+++.++.++...   ...+++++.+
T Consensus       122 -~~-~~~~v~~SS~~vyg~~~~~--------~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~l  191 (357)
T 1rkx_A          122 -GG-VKAVVNITSDKCYDNKEWI--------WGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATV  191 (357)
T ss_dssp             -CC-CCEEEEECCGGGBCCCCSS--------SCBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEE
T ss_pred             -CC-CCeEEEecCHHHhCCCCcC--------CCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEE
Confidence             11 4799999998765422110        001112233445789999999999999999886200   0138999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHH--H--------hhcCCCHHHHHHHHHHHhcC---CCCcccceeecCC
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLK--L--------LGLLQSPEKGINSVLDAALA---PPETSGVYFFGGK  227 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~--~--------~~~~~~p~~~a~~~~~~~~~---~~~~~G~~~~~~~  227 (266)
                      .||.+.++..................  +        ...+..++++|++++.++..   .+...|..|+.+.
T Consensus       192 rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~  264 (357)
T 1rkx_A          192 RAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGP  264 (357)
T ss_dssp             ECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCC
T ss_pred             eeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeeccEeHHHHHHHHHHHHHhhhhcCCCCCceEEECC
Confidence            99999987642211111111111100  0        11245789999999876653   2223455555454

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.41  E-value=3.1e-12  Score=108.91  Aligned_cols=187  Identities=13%  Similarity=0.053  Sum_probs=120.3

Q ss_pred             ccEEEE-EecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           11 ARLEAF-QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        11 ~~~~~i-~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      .++.++ .+|+++.+++.+++             .++|+||||||.....     +++++.+++|+.++..+++.+.+. 
T Consensus        61 ~~~~~~~~~D~~d~~~~~~~~-------------~~~d~vih~A~~~~~~-----~~~~~~~~~n~~g~~~ll~~~~~~-  121 (342)
T 1y1p_A           61 GRFETAVVEDMLKQGAYDEVI-------------KGAAGVAHIASVVSFS-----NKYDEVVTPAIGGTLNALRAAAAT-  121 (342)
T ss_dssp             TTEEEEECSCTTSTTTTTTTT-------------TTCSEEEECCCCCSCC-----SCHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred             CceEEEEecCCcChHHHHHHH-------------cCCCEEEEeCCCCCCC-----CCHHHHHHHHHHHHHHHHHHHHhC-
Confidence            457888 89999988765543             3689999999986421     457889999999999999988652 


Q ss_pred             hcCCCCCeEEEEcCCcccccc-c----ccCCccccccCc------ccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVF-N----AQVNNETITGKF------FLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDK  158 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~-~----~~~~~~~~~~~~------~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~  158 (266)
                        .+ .++||++||..++... +    ..++.++.....      .....+..+...|+.+|.+.+.+++.+++++.   
T Consensus       122 --~~-~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~---  195 (342)
T 1y1p_A          122 --PS-VKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK---  195 (342)
T ss_dssp             --TT-CCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred             --CC-CcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcC---
Confidence              22 5799999998764311 1    011111000000      00000123457899999999999999999985   


Q ss_pred             CCCeEEEEecCCcccCCccCcch---hHHHHHHHHH-------HH--HhhcCCCHHHHHHHHHHHhcCCCCcccceee
Q 024553          159 SRHVSVIAADPGVVKTNIMREVP---SFLSLMAFTV-------LK--LLGLLQSPEKGINSVLDAALAPPETSGVYFF  224 (266)
Q Consensus       159 ~~~i~v~~v~PG~v~T~~~~~~~---~~~~~~~~~~-------~~--~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~  224 (266)
                       .+++++.+.||.+.++......   ....+.....       ..  ....+..++++|++++.++..+ ...|.++.
T Consensus       196 -~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~-~~~g~~~~  271 (342)
T 1y1p_A          196 -PHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLP-QIERRRVY  271 (342)
T ss_dssp             -CSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCT-TCCSCEEE
T ss_pred             -CCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccCCcCCEeEHHHHHHHHHHHHcCc-ccCCceEE
Confidence             4899999999999998764321   1111111000       00  1224568999999999766543 34565443

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.41  E-value=6.3e-13  Score=113.42  Aligned_cols=190  Identities=14%  Similarity=0.008  Sum_probs=126.2

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      ..+.++.+|+++.+++.+++++           .++|+||||||....  ....+..++.+++|+.++..+++.+    +
T Consensus        55 ~~~~~~~~Dl~d~~~~~~~~~~-----------~~~d~vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~----~  117 (341)
T 3enk_A           55 KTPAFHETDVSDERALARIFDA-----------HPITAAIHFAALKAV--GESVAKPIEYYRNNLDSLLSLLRVM----R  117 (341)
T ss_dssp             CCCEEECCCTTCHHHHHHHHHH-----------SCCCEEEECCCCCCH--HHHHHCHHHHHHHHHHHHHHHHHHH----H
T ss_pred             CCceEEEeecCCHHHHHHHHhc-----------cCCcEEEECcccccc--CccccChHHHHHHHHHHHHHHHHHH----H
Confidence            3688999999999999888753           369999999998632  1123445688999999999887765    4


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                      +.+ .++||++||...+.....         ....+..+..+...|+.+|.+.+.+++.++.++     .++.++.+.||
T Consensus       118 ~~~-~~~iv~~SS~~~~g~~~~---------~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~~~lRp~  182 (341)
T 3enk_A          118 ERA-VKRIVFSSSATVYGVPER---------SPIDETFPLSATNPYGQTKLMAEQILRDVEAAD-----PSWRVATLRYF  182 (341)
T ss_dssp             HTT-CCEEEEEEEGGGBCSCSS---------SSBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHC-----TTCEEEEEEEC
T ss_pred             hCC-CCEEEEEecceEecCCCC---------CCCCCCCCCCCCChhHHHHHHHHHHHHHHhhcC-----CCceEEEEeec
Confidence            444 579999999776532111         112223344556789999999999999999885     47899999999


Q ss_pred             cccCCccCcc---------hhHHHHHHHHHHH---Hh---------------hcCCCHHHHHHHHHHHhcCC-CCcccce
Q 024553          171 VVKTNIMREV---------PSFLSLMAFTVLK---LL---------------GLLQSPEKGINSVLDAALAP-PETSGVY  222 (266)
Q Consensus       171 ~v~T~~~~~~---------~~~~~~~~~~~~~---~~---------------~~~~~p~~~a~~~~~~~~~~-~~~~G~~  222 (266)
                      .+.++.....         .............   ++               ..+..++|+|++++.++..+ +...|..
T Consensus       183 ~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~  262 (341)
T 3enk_A          183 NPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVDLARGHIAALDALERRDASLT  262 (341)
T ss_dssp             EEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEE
T ss_pred             cccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceE
Confidence            9987643110         0111111111110   00               11346799999999766542 2345666


Q ss_pred             eecCCCcccc
Q 024553          223 FFGGKGRTVN  232 (266)
Q Consensus       223 ~~~~~g~~~~  232 (266)
                      |+.++|+.+.
T Consensus       263 ~ni~~~~~~s  272 (341)
T 3enk_A          263 VNLGTGRGYS  272 (341)
T ss_dssp             EEESCSCCEE
T ss_pred             EEeCCCCcee
Confidence            7767777665

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.39  E-value=1.4e-13  Score=111.50  Aligned_cols=158  Identities=13%  Similarity=0.041  Sum_probs=110.5

Q ss_pred             cE-EEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           12 RL-EAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        12 ~~-~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .+ .++.+|++         +.+.+      .++++|+||||||...      .+++++.+++|+.++..+++.+...  
T Consensus        65 ~~~~~~~~Dl~---------~~~~~------~~~~~D~vi~~ag~~~------~~~~~~~~~~n~~~~~~l~~a~~~~--  121 (236)
T 3e8x_A           65 GASDIVVANLE---------EDFSH------AFASIDAVVFAAGSGP------HTGADKTILIDLWGAIKTIQEAEKR--  121 (236)
T ss_dssp             TCSEEEECCTT---------SCCGG------GGTTCSEEEECCCCCT------TSCHHHHHHTTTHHHHHHHHHHHHH--
T ss_pred             CCceEEEcccH---------HHHHH------HHcCCCEEEECCCCCC------CCCccccchhhHHHHHHHHHHHHHc--
Confidence            46 88999999         23333      3468999999999853      2568999999999999999988432  


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                        + .++||++||..+...                 .........|+.+|.+.+.+++          ..+++++.+.||
T Consensus       122 --~-~~~iv~~SS~~~~~~-----------------~~~~~~~~~Y~~sK~~~e~~~~----------~~gi~~~~lrpg  171 (236)
T 3e8x_A          122 --G-IKRFIMVSSVGTVDP-----------------DQGPMNMRHYLVAKRLADDELK----------RSSLDYTIVRPG  171 (236)
T ss_dssp             --T-CCEEEEECCTTCSCG-----------------GGSCGGGHHHHHHHHHHHHHHH----------HSSSEEEEEEEC
T ss_pred             --C-CCEEEEEecCCCCCC-----------------CCChhhhhhHHHHHHHHHHHHH----------HCCCCEEEEeCC
Confidence              3 579999999665321                 0011456789999999998875          258999999999


Q ss_pred             cccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCC
Q 024553          171 VVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKG  228 (266)
Q Consensus       171 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g  228 (266)
                      ++.|+..........     .......+.+++++|+.+++++..+ ...|..|..++|
T Consensus       172 ~v~~~~~~~~~~~~~-----~~~~~~~~i~~~Dva~~~~~~~~~~-~~~g~~~~v~~~  223 (236)
T 3e8x_A          172 PLSNEESTGKVTVSP-----HFSEITRSITRHDVAKVIAELVDQQ-HTIGKTFEVLNG  223 (236)
T ss_dssp             SEECSCCCSEEEEES-----SCSCCCCCEEHHHHHHHHHHHTTCG-GGTTEEEEEEEC
T ss_pred             cccCCCCCCeEEecc-----CCCcccCcEeHHHHHHHHHHHhcCc-cccCCeEEEeCC
Confidence            999986543211000     0000124568999999999765543 356777765555

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.38  E-value=4.9e-12  Score=108.35  Aligned_cols=188  Identities=11%  Similarity=-0.010  Sum_probs=128.0

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .++.++.+|+++.+++.+++             ..+|+|||+||....  ..+.++.++.+++|+.++..+++.+...  
T Consensus        79 ~~~~~~~~Dl~d~~~~~~~~-------------~~~d~Vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~ll~a~~~~--  141 (351)
T 3ruf_A           79 SRFCFIEGDIRDLTTCEQVM-------------KGVDHVLHQAALGSV--PRSIVDPITTNATNITGFLNILHAAKNA--  141 (351)
T ss_dssp             TTEEEEECCTTCHHHHHHHT-------------TTCSEEEECCCCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHT--
T ss_pred             CceEEEEccCCCHHHHHHHh-------------cCCCEEEECCccCCc--chhhhCHHHHHHHHHHHHHHHHHHHHHc--
Confidence            46899999999998887665             268999999997532  2234567789999999999999888443  


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                        + .+++|++||...+.....         ....+..+..+...|+.+|.+.+.+++.++.+.      ++.++.+.||
T Consensus       142 --~-~~~~v~~SS~~vyg~~~~---------~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~------g~~~~ilRp~  203 (351)
T 3ruf_A          142 --Q-VQSFTYAASSSTYGDHPA---------LPKVEENIGNPLSPYAVTKYVNEIYAQVYARTY------GFKTIGLRYF  203 (351)
T ss_dssp             --T-CSEEEEEEEGGGGTTCCC---------SSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH------CCCCEEEEEC
T ss_pred             --C-CCEEEEEecHHhcCCCCC---------CCCccCCCCCCCChhHHHHHHHHHHHHHHHHHh------CCCEEEEeeC
Confidence              3 469999999876543211         111223334455789999999999999988874      6788899999


Q ss_pred             cccCCccCcch---hHHHHHHHHHHH--Hh---------hcCCCHHHHHHHHHHHhcCCCCcccceeecCCCccccC
Q 024553          171 VVKTNIMREVP---SFLSLMAFTVLK--LL---------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNS  233 (266)
Q Consensus       171 ~v~T~~~~~~~---~~~~~~~~~~~~--~~---------~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~~  233 (266)
                      .+.++......   ............  ++         ..+..++++|++++.++...+...|..|+.++++.+.+
T Consensus       204 ~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~  280 (351)
T 3ruf_A          204 NVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALAKDSAKDNIYNVAVGDRTTL  280 (351)
T ss_dssp             SEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEEH
T ss_pred             ceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhhccccCCCEEEeCCCCcccH
Confidence            99887654321   111111111111  10         12456999999999776664455677777677776653

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.36  E-value=4.2e-12  Score=106.91  Aligned_cols=184  Identities=13%  Similarity=0.003  Sum_probs=124.6

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      ..+.++.+|+++.+ +.+++             .. |+|||+||...  ...+.++++..+++|+.++..+++.+...  
T Consensus        43 ~~~~~~~~Dl~d~~-~~~~~-------------~~-d~vih~A~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--  103 (312)
T 3ko8_A           43 PSAELHVRDLKDYS-WGAGI-------------KG-DVVFHFAANPE--VRLSTTEPIVHFNENVVATFNVLEWARQT--  103 (312)
T ss_dssp             TTSEEECCCTTSTT-TTTTC-------------CC-SEEEECCSSCS--SSGGGSCHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred             CCceEEECccccHH-HHhhc-------------CC-CEEEECCCCCC--chhhhhCHHHHHHHHHHHHHHHHHHHHHc--
Confidence            45788999999987 54322             23 99999999642  34466778999999999999999988442  


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                        + .++||++||...+.....         ....+..+..+...|+.+|.+.+.+++.++.++      +++++.+.||
T Consensus       104 --~-~~~iv~~SS~~vyg~~~~---------~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~------g~~~~~lrp~  165 (312)
T 3ko8_A          104 --G-VRTVVFASSSTVYGDADV---------IPTPEEEPYKPISVYGAAKAAGEVMCATYARLF------GVRCLAVRYA  165 (312)
T ss_dssp             --T-CCEEEEEEEGGGGCSCSS---------SSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCEEEEEEEC
T ss_pred             --C-CCEEEEeCcHHHhCCCCC---------CCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh------CCCEEEEeec
Confidence              2 469999999876543211         112223345556789999999999999998885      7899999999


Q ss_pred             cccCCccCcchhHHHHHHHHHH--HH---------hhcCCCHHHHHHHHHHHhcCC--CCcccceeecCCCcccc
Q 024553          171 VVKTNIMREVPSFLSLMAFTVL--KL---------LGLLQSPEKGINSVLDAALAP--PETSGVYFFGGKGRTVN  232 (266)
Q Consensus       171 ~v~T~~~~~~~~~~~~~~~~~~--~~---------~~~~~~p~~~a~~~~~~~~~~--~~~~G~~~~~~~g~~~~  232 (266)
                      .+.++........ .+......  .+         ...+..++|+|++++.++..+  +...|..|+.++++.+.
T Consensus       166 ~v~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~~~~~s  239 (312)
T 3ko8_A          166 NVVGPRLRHGVIY-DFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLALNVGNVDAVR  239 (312)
T ss_dssp             EEECTTCCSSHHH-HHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCSEEEEEESCSSCEE
T ss_pred             cccCcCCCCChHH-HHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCCCcEEEEcCCCcee
Confidence            9998875432111 11111110  00         112446999999999776551  23445666666666654

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.36  E-value=1.4e-12  Score=104.43  Aligned_cols=160  Identities=10%  Similarity=0.120  Sum_probs=112.1

Q ss_pred             ccEEEEEecCCC-HHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           11 ARLEAFQVDLSS-FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        11 ~~~~~i~~Dls~-~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      ..+.++.+|+++ .+++.+++             ..+|+||||||...          .+.+++|+.++..+++.+.   
T Consensus        41 ~~~~~~~~D~~d~~~~~~~~~-------------~~~d~vi~~ag~~~----------~~~~~~n~~~~~~l~~a~~---   94 (219)
T 3dqp_A           41 NNVKAVHFDVDWTPEEMAKQL-------------HGMDAIINVSGSGG----------KSLLKVDLYGAVKLMQAAE---   94 (219)
T ss_dssp             TTEEEEECCTTSCHHHHHTTT-------------TTCSEEEECCCCTT----------SSCCCCCCHHHHHHHHHHH---
T ss_pred             CCceEEEecccCCHHHHHHHH-------------cCCCEEEECCcCCC----------CCcEeEeHHHHHHHHHHHH---
Confidence            468999999999 87776544             46999999999864          2488999999999888873   


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                       +.+ .++||++||..+....+  +.           +....+...|+.+|.+.+.+++    +     ..+++++.+.|
T Consensus        95 -~~~-~~~iv~~SS~~~~~~~~--~~-----------e~~~~~~~~Y~~sK~~~e~~~~----~-----~~~i~~~ilrp  150 (219)
T 3dqp_A           95 -KAE-VKRFILLSTIFSLQPEK--WI-----------GAGFDALKDYYIAKHFADLYLT----K-----ETNLDYTIIQP  150 (219)
T ss_dssp             -HTT-CCEEEEECCTTTTCGGG--CC-----------SHHHHHTHHHHHHHHHHHHHHH----H-----SCCCEEEEEEE
T ss_pred             -HhC-CCEEEEECcccccCCCc--cc-----------ccccccccHHHHHHHHHHHHHH----h-----ccCCcEEEEeC
Confidence             333 57999999987643110  00           0012235789999999998886    2     57899999999


Q ss_pred             CcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCc
Q 024553          170 GVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGR  229 (266)
Q Consensus       170 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~  229 (266)
                      |++.++.........        .....+.+++++|+.++.++..+ ...|..|..++|.
T Consensus       151 ~~v~g~~~~~~~~~~--------~~~~~~i~~~Dva~~i~~~l~~~-~~~g~~~~i~~g~  201 (219)
T 3dqp_A          151 GALTEEEATGLIDIN--------DEVSASNTIGDVADTIKELVMTD-HSIGKVISMHNGK  201 (219)
T ss_dssp             CSEECSCCCSEEEES--------SSCCCCEEHHHHHHHHHHHHTCG-GGTTEEEEEEECS
T ss_pred             ceEecCCCCCccccC--------CCcCCcccHHHHHHHHHHHHhCc-cccCcEEEeCCCC
Confidence            999887544321110        11224568999999999766554 3446666655543

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.36  E-value=5.4e-11  Score=102.56  Aligned_cols=189  Identities=8%  Similarity=0.001  Sum_probs=119.0

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .++.++.+|+++.+++.++++.+           ++|+||||||....  ..+.+++++.+++|+.++..+++.+.+...
T Consensus        55 ~~~~~~~~Dl~d~~~~~~~~~~~-----------~~d~vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  121 (372)
T 1db3_A           55 PKFHLHYGDLSDTSNLTRILREV-----------QPDEVYNLGAMSHV--AVSFESPEYTADVDAMGTLRLLEAIRFLGL  121 (372)
T ss_dssp             CCEEECCCCSSCHHHHHHHHHHH-----------CCSEEEECCCCCTT--TTTTSCHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred             CceEEEECCCCCHHHHHHHHHhc-----------CCCEEEECCcccCc--cccccCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            46889999999999998887644           48999999998542  235567889999999999999999977643


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                      + + .++||++||...+.....         ....+..+..+...|+.+|.+.+.+++.++.++.      +.+..+.|.
T Consensus       122 ~-~-~~~iv~~SS~~v~g~~~~---------~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~------~~~~~~r~~  184 (372)
T 1db3_A          122 E-K-KTRFYQASTSELYGLVQE---------IPQKETTPFYPRSPYAVAKLYAYWITVNYRESYG------MYACNGILF  184 (372)
T ss_dssp             T-T-TCEEEEEEEGGGGTTCCS---------SSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC------CCEEEEEEC
T ss_pred             C-C-CcEEEEeCChhhhCCCCC---------CCCCccCCCCCCChHHHHHHHHHHHHHHHHHHhC------CCeEEEEEC
Confidence            2 1 379999999876542211         0111223344467899999999999999998863      333344444


Q ss_pred             cccCCccCc-chhH-HHHHHHHHH-H-----Hh------hcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          171 VVKTNIMRE-VPSF-LSLMAFTVL-K-----LL------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       171 ~v~T~~~~~-~~~~-~~~~~~~~~-~-----~~------~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      .+..+.... .... ......... .     .+      ..+..++++|++++.++..+.  .+.| +.++++.+.
T Consensus       185 ~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~--~~~~-ni~~~~~~s  257 (372)
T 1db3_A          185 NHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQ--PEDF-VIATGVQYS  257 (372)
T ss_dssp             CEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSSS--CCCE-EECCCCCEE
T ss_pred             CccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHHHHHHhcCC--CceE-EEcCCCcee
Confidence            444333221 1110 000100000 0     00      124579999999986554332  3444 445555554

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.36  E-value=1.8e-11  Score=105.38  Aligned_cols=180  Identities=17%  Similarity=0.136  Sum_probs=116.5

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      +..+.++.+|+++.++++++    .        ..++|+||||||...    .+.+.++..+++|+.++..+++.+.   
T Consensus        67 ~~~~~~~~~Dl~d~~~~~~~----~--------~~~~D~vih~A~~~~----~~~~~~~~~~~~Nv~gt~~ll~aa~---  127 (362)
T 3sxp_A           67 GFKGEVIAADINNPLDLRRL----E--------KLHFDYLFHQAAVSD----TTMLNQELVMKTNYQAFLNLLEIAR---  127 (362)
T ss_dssp             TCCSEEEECCTTCHHHHHHH----T--------TSCCSEEEECCCCCG----GGCCCHHHHHHHHTHHHHHHHHHHH---
T ss_pred             ccCceEEECCCCCHHHHHHh----h--------ccCCCEEEECCccCC----ccccCHHHHHHHHHHHHHHHHHHHH---
Confidence            34578999999999998776    1        157999999999643    2567789999999999999999883   


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                       +.  +++||++||...+......          ..+..+..+...|+.+|.+.+.+++.++.+        +.++.+.|
T Consensus       128 -~~--~~~~V~~SS~~vyg~~~~~----------~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~--------~~~~~lR~  186 (362)
T 3sxp_A          128 -SK--KAKVIYASSAGVYGNTKAP----------NVVGKNESPENVYGFSKLCMDEFVLSHSND--------NVQVGLRY  186 (362)
T ss_dssp             -HT--TCEEEEEEEGGGGCSCCSS----------BCTTSCCCCSSHHHHHHHHHHHHHHHTTTT--------SCEEEEEE
T ss_pred             -Hc--CCcEEEeCcHHHhCCCCCC----------CCCCCCCCCCChhHHHHHHHHHHHHHHhcc--------CCEEEEEe
Confidence             22  3569999997655432221          122234445577999999999999776544        45666677


Q ss_pred             CcccCCccCcch---hHHHHHHHHHHH--H---------hhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          170 GVVKTNIMREVP---SFLSLMAFTVLK--L---------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       170 G~v~T~~~~~~~---~~~~~~~~~~~~--~---------~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      +.+..+......   ............  +         ...+..++++|++++.++..  ..+| .|..++|+...
T Consensus       187 ~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~--~~~g-~~~i~~~~~~s  260 (362)
T 3sxp_A          187 FNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKA--QKSG-VYNVGYSQARS  260 (362)
T ss_dssp             CSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTTC--SSCE-EEEESCSCEEE
T ss_pred             CceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHhc--CCCC-EEEeCCCCCcc
Confidence            766655432211   001111111100  0         01244699999999965443  3467 66656676654

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.35  E-value=8.6e-12  Score=106.30  Aligned_cols=181  Identities=13%  Similarity=0.061  Sum_probs=114.2

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      .+.++.+|+++.+++.+++             ..+|+|||+||...    ...+++++.+++|+.++..+++.+.+.   
T Consensus        57 ~~~~~~~Dl~d~~~~~~~~-------------~~~d~vih~a~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~---  116 (342)
T 2x4g_A           57 EPECRVAEMLDHAGLERAL-------------RGLDGVIFSAGYYP----SRPRRWQEEVASALGQTNPFYAACLQA---  116 (342)
T ss_dssp             CCEEEECCTTCHHHHHHHT-------------TTCSEEEEC----------------CHHHHHHHHHHHHHHHHHHH---
T ss_pred             CeEEEEecCCCHHHHHHHH-------------cCCCEEEECCccCc----CCCCCHHHHHHHHHHHHHHHHHHHHHc---
Confidence            5789999999998877655             25899999999753    234568899999999999999999764   


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCCh----hhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPC----ARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                       + .++||++||..++.........        .+..+..+    ...|+.+|.+.+.+++.++.      . +++++.+
T Consensus       117 -~-~~~~v~~SS~~~~~~~~~~~~~--------~E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~------~-g~~~~il  179 (342)
T 2x4g_A          117 -R-VPRILYVGSAYAMPRHPQGLPG--------HEGLFYDSLPSGKSSYVLCKWALDEQAREQAR------N-GLPVVIG  179 (342)
T ss_dssp             -T-CSCEEEECCGGGSCCCTTSSCB--------CTTCCCSSCCTTSCHHHHHHHHHHHHHHHHHH------T-TCCEEEE
T ss_pred             -C-CCeEEEECCHHhhCcCCCCCCC--------CCCCCCCccccccChHHHHHHHHHHHHHHHhh------c-CCcEEEE
Confidence             2 4799999998875432210000        11222223    56899999999999988764      3 6789999


Q ss_pred             cCCcccCCcc-C-cchhHHHHHHHHHHH----HhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          168 DPGVVKTNIM-R-EVPSFLSLMAFTVLK----LLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       168 ~PG~v~T~~~-~-~~~~~~~~~~~~~~~----~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      .||.+.++.. . ...............    ....+..++++|++++.++..+..  |..|..++++ +.
T Consensus       180 rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~--g~~~~v~~~~-~s  247 (342)
T 2x4g_A          180 IPGMVLGELDIGPTTGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERGRI--GERYLLTGHN-LE  247 (342)
T ss_dssp             EECEEECSCCSSCSTTHHHHHHHTTCCCEEECCEEEEEEHHHHHHHHHHHHHHSCT--TCEEEECCEE-EE
T ss_pred             eCCceECCCCccccHHHHHHHHHcCCCccccCCCcceeeHHHHHHHHHHHHhCCCC--CceEEEcCCc-cc
Confidence            9999998865 2 111111110000000    001245899999999977655432  6666666666 54

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.35  E-value=1.7e-11  Score=103.20  Aligned_cols=185  Identities=13%  Similarity=0.013  Sum_probs=122.0

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      .+.++.+|+++.+++.+++++.           .+|++||+||....  ..+.+++++.+++|+.+++.+++.+..    
T Consensus        44 ~~~~~~~Dl~~~~~~~~~~~~~-----------~~d~vi~~a~~~~~--~~~~~~~~~~~~~N~~g~~~l~~a~~~----  106 (311)
T 2p5y_A           44 GVPFFRVDLRDKEGVERAFREF-----------RPTHVSHQAAQASV--KVSVEDPVLDFEVNLLGGLNLLEACRQ----  106 (311)
T ss_dssp             TCCEECCCTTCHHHHHHHHHHH-----------CCSEEEECCSCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHH----
T ss_pred             CeEEEECCCCCHHHHHHHHHhc-----------CCCEEEECccccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHH----
Confidence            4678899999999988877532           58999999997531  224466789999999999999998853    


Q ss_pred             CCCCCeEEEEcCC-cccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           92 SPVPSRIVNVTSF-THRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        92 ~~~~~~iv~vsS~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                      .+ .++||++||. ..+.....        +....+..+..+...|+.+|.+.+.+++.++.++      +++++.+.||
T Consensus       107 ~~-~~~iv~~SS~~~~~g~~~~--------~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------~~~~~~lrp~  171 (311)
T 2p5y_A          107 YG-VEKLVFASTGGAIYGEVPE--------GERAEETWPPRPKSPYAASKAAFEHYLSVYGQSY------GLKWVSLRYG  171 (311)
T ss_dssp             TT-CSEEEEEEEHHHHHCCCCT--------TCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCCEEEEEEC
T ss_pred             hC-CCEEEEeCCChhhcCCCCC--------CCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHc------CCCEEEEeec
Confidence            23 4799999997 43221000        0011112233345689999999999999988774      6889999999


Q ss_pred             cccCCccCcch--hHHHHHHHHHHH--H---h-----------hcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          171 VVKTNIMREVP--SFLSLMAFTVLK--L---L-----------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       171 ~v~T~~~~~~~--~~~~~~~~~~~~--~---~-----------~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      .+.++......  ............  +   .           ..+..++|+|++++.++..+    |..|+.++|+...
T Consensus       172 ~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~----~~~~~i~~~~~~s  247 (311)
T 2p5y_A          172 NVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFSL----EGIYNVGTGEGHT  247 (311)
T ss_dssp             EEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHHHC----CEEEEESCSCCEE
T ss_pred             cccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHhCC----CCEEEeCCCCCcc
Confidence            99988654321  111111111111  0   1           12346899999999766543    5556656666554

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.34  E-value=1.3e-12  Score=135.32  Aligned_cols=114  Identities=14%  Similarity=0.121  Sum_probs=88.1

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+       .++||+||||||+.  .++.+++.++|++++++|+.|++++.+.+.+
T Consensus      1936 g~~v~~~~~Dvsd~~~v~~~~~~~~~-------~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~ 2008 (2512)
T 2vz8_A         1936 GVQVLVSTSNASSLDGARSLITEATQ-------LGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTRE 2008 (2512)
T ss_dssp             TCEEEEECCCSSSHHHHHHHHHHHHH-------HSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHH
T ss_pred             CCEEEEEecCCCCHHHHHHHHHHHHh-------cCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            56799999999999999999999865       37999999999986  3567889999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHh
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRN  153 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~  153 (266)
                      .|.+   .++||++||.++..                    +.++...|+++|+++..|++++..+
T Consensus      2009 ~~~~---~g~iV~iSS~ag~~--------------------g~~g~~~Y~aaKaal~~l~~~rr~~ 2051 (2512)
T 2vz8_A         2009 ACPE---LDYFVIFSSVSCGR--------------------GNAGQANYGFANSAMERICEKRRHD 2051 (2512)
T ss_dssp             HCTT---CCEEEEECCHHHHT--------------------TCTTCHHHHHHHHHHHHHHHHHHHT
T ss_pred             hccc---CCEEEEecchhhcC--------------------CCCCcHHHHHHHHHHHHHHHHHHHC
Confidence            8866   47999999988743                    5567788999999999999976554

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.33  E-value=6.8e-11  Score=102.18  Aligned_cols=189  Identities=6%  Similarity=-0.029  Sum_probs=121.2

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .++.++.+|+++.+++.++++.+           ++|+||||||....  ..+.+++++.+++|+.++..+++.+.+...
T Consensus        79 ~~~~~~~~Dl~d~~~~~~~~~~~-----------~~d~vih~A~~~~~--~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~  145 (375)
T 1t2a_A           79 GNMKLHYGDLTDSTCLVKIINEV-----------KPTEIYNLGAQSHV--KISFDLAEYTADVDGVGTLRLLDAVKTCGL  145 (375)
T ss_dssp             -CEEEEECCTTCHHHHHHHHHHH-----------CCSEEEECCSCCCH--HHHHHSHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred             CCceEEEccCCCHHHHHHHHHhc-----------CCCEEEECCCcccc--cccccCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            46889999999999988877644           48999999997531  123456789999999999999999977543


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                      + + .++||++||...+.....         ....+..+..+...|+.+|.+.+.+++.++.++      ++.+..+.|+
T Consensus       146 ~-~-~~~iv~~SS~~~~~~~~~---------~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------~~~~~i~r~~  208 (375)
T 1t2a_A          146 I-N-SVKFYQASTSELYGKVQE---------IPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY------NLFAVNGILF  208 (375)
T ss_dssp             T-T-TCEEEEEEEGGGTCSCSS---------SSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCEEEEEEEC
T ss_pred             C-c-cceEEEecchhhhCCCCC---------CCCCccCCCCCCChhHHHHHHHHHHHHHHHHHh------CCCEEEEecc
Confidence            2 1 379999999876542211         011122233445689999999999999998875      4556666666


Q ss_pred             cccCCccCc-chhH-HHHHHHHHHH---H---h------hcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          171 VVKTNIMRE-VPSF-LSLMAFTVLK---L---L------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       171 ~v~T~~~~~-~~~~-~~~~~~~~~~---~---~------~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      .+..+.... .... ..........   +   +      ..+..++++|++++.++..+.  .|.|.. +.++.+.
T Consensus       209 ~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~--~~~~ni-~~~~~~s  281 (375)
T 1t2a_A          209 NHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDE--PEDFVI-ATGEVHS  281 (375)
T ss_dssp             CEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSS--CCCEEE-CCSCCEE
T ss_pred             cccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHHHHHhcCC--CceEEE-eCCCccc
Confidence            665553321 1110 0001000000   0   1      124579999999997765443  355544 5555554

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.33  E-value=1.9e-12  Score=110.17  Aligned_cols=178  Identities=11%  Similarity=-0.004  Sum_probs=113.4

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      ++.++.+|+++.+++.++++++           ++|+||||||.....   +.++++  +++|+.++..+++.+...   
T Consensus        66 ~v~~~~~Dl~d~~~~~~~~~~~-----------~~D~vih~A~~~~~~---~~~~~~--~~~N~~~~~~l~~a~~~~---  126 (330)
T 2pzm_A           66 GLSVIEGSVTDAGLLERAFDSF-----------KPTHVVHSAAAYKDP---DDWAED--AATNVQGSINVAKAASKA---  126 (330)
T ss_dssp             TEEEEECCTTCHHHHHHHHHHH-----------CCSEEEECCCCCSCT---TCHHHH--HHHHTHHHHHHHHHHHHH---
T ss_pred             CceEEEeeCCCHHHHHHHHhhc-----------CCCEEEECCccCCCc---cccChh--HHHHHHHHHHHHHHHHHc---
Confidence            5889999999999998887644           589999999986432   444555  999999999999998742   


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeE-EEEecCC
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVS-VIAADPG  170 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~-v~~v~PG  170 (266)
                       + .++||++||..++...... .      ....+..  .+...|+.+|.+.+.+++.+  .+.   ...++ ++.+.||
T Consensus       127 -~-~~~iV~~SS~~~~~~~~~~-~------~~~~E~~--~~~~~Y~~sK~~~e~~~~~~--~~~---~~~iR~~~v~gp~  190 (330)
T 2pzm_A          127 -G-VKRLLNFQTALCYGRPATV-P------IPIDSPT--APFTSYGISKTAGEAFLMMS--DVP---VVSLRLANVTGPR  190 (330)
T ss_dssp             -T-CSEEEEEEEGGGGCSCSSS-S------BCTTCCC--CCCSHHHHHHHHHHHHHHTC--SSC---EEEEEECEEECTT
T ss_pred             -C-CCEEEEecCHHHhCCCccC-C------CCcCCCC--CCCChHHHHHHHHHHHHHHc--CCC---EEEEeeeeeECcC
Confidence             2 5799999998765321100 0      0001111  24567999999999999776  442   34566 6677777


Q ss_pred             cccCCccCcchhHHHHHHHHHHHH-----hhcCCCHHHHHH-HHHHHhcCCCCcccceeecCCCcccc
Q 024553          171 VVKTNIMREVPSFLSLMAFTVLKL-----LGLLQSPEKGIN-SVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       171 ~v~T~~~~~~~~~~~~~~~~~~~~-----~~~~~~p~~~a~-~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      . .+++...+   ........ ..     ...+..++++|+ +++.++..+ .  |..|..++|....
T Consensus       191 ~-~~~~~~~~---~~~~~~~~-~~~~~~~~~~~i~~~Dva~~a~~~~~~~~-~--g~~~~v~~~~~~s  250 (330)
T 2pzm_A          191 L-AIGPIPTF---YKRLKAGQ-KCFCSDTVRDFLDMSDFLAIADLSLQEGR-P--TGVFNVSTGEGHS  250 (330)
T ss_dssp             C-CSSHHHHH---HHHHHTTC-CCCEESCEECEEEHHHHHHHHHHHTSTTC-C--CEEEEESCSCCEE
T ss_pred             C-CCCHHHHH---HHHHHcCC-EEeCCCCEecceeHHHHHHHHHHHHhhcC-C--CCEEEeCCCCCCC
Confidence            4 33321110   00000000 00     234568999999 998554432 2  6666666666554

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.33  E-value=8.4e-11  Score=101.81  Aligned_cols=121  Identities=14%  Similarity=0.034  Sum_probs=91.5

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      .+.++.+|+++.+++.++++.+           ++|+|||+||....  ..+.++++..+++|+.++..+++.+.+...+
T Consensus        84 ~~~~~~~Dl~d~~~~~~~~~~~-----------~~d~Vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~  150 (381)
T 1n7h_A           84 LMKLHYADLTDASSLRRWIDVI-----------KPDEVYNLAAQSHV--AVSFEIPDYTADVVATGALRLLEAVRSHTID  150 (381)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHH-----------CCSEEEECCSCCCH--HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             ceEEEECCCCCHHHHHHHHHhc-----------CCCEEEECCcccCc--cccccCHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            6889999999999988877544           48999999998532  2234568899999999999999999988754


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhC
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLG  155 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~  155 (266)
                      ++..++||++||...+.....          ...+..+..+...|+.+|.+.+.+++.++.++.
T Consensus       151 ~~~~~~~v~~SS~~vyg~~~~----------~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~  204 (381)
T 1n7h_A          151 SGRTVKYYQAGSSEMFGSTPP----------PQSETTPFHPRSPYAASKCAAHWYTVNYREAYG  204 (381)
T ss_dssp             HCCCCEEEEEEEGGGGTTSCS----------SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC
T ss_pred             cCCccEEEEeCcHHHhCCCCC----------CCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhC
Confidence            322579999999876543211          111222344567899999999999999988763

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.32  E-value=2.1e-11  Score=104.23  Aligned_cols=190  Identities=12%  Similarity=0.049  Sum_probs=122.7

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .++.++.+|+++.+++.+++++           .++|+|||+||.....  .+.+++++.+++|+.++..+++.+.    
T Consensus        58 ~~~~~~~~D~~~~~~~~~~~~~-----------~~~d~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~----  120 (348)
T 1ek6_A           58 RSVEFEEMDILDQGALQRLFKK-----------YSFMAVIHFAGLKAVG--ESVQKPLDYYRVNLTGTIQLLEIMK----  120 (348)
T ss_dssp             CCCEEEECCTTCHHHHHHHHHH-----------CCEEEEEECCSCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHH----
T ss_pred             CceEEEECCCCCHHHHHHHHHh-----------cCCCEEEECCCCcCcc--chhhchHHHHHHHHHHHHHHHHHHH----
Confidence            3678999999999988877642           1699999999975321  1345678999999999999988763    


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCC-ChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCY-PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      +.+ .++||++||...+.....         ....+..+. +....|+.+|.+.+.+++.++.+ .    +++.++.+.|
T Consensus       121 ~~~-~~~iv~~SS~~~~g~~~~---------~~~~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~-~----~~~~~~~lR~  185 (348)
T 1ek6_A          121 AHG-VKNLVFSSSATVYGNPQY---------LPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQA-D----KTWNAVLLRY  185 (348)
T ss_dssp             HTT-CCEEEEEEEGGGGCSCSS---------SSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHH-C----TTCEEEEEEE
T ss_pred             HhC-CCEEEEECcHHHhCCCCC---------CCcCCCCCCCCCCCchHHHHHHHHHHHHHHHhc-C----CCcceEEEee
Confidence            333 579999999876542110         011112222 22568999999999999998877 3    5789999999


Q ss_pred             CcccCCccC-----cc----hhHHHHHHHHHH---HH---------------hhcCCCHHHHHHHHHHHhcCCCCccc-c
Q 024553          170 GVVKTNIMR-----EV----PSFLSLMAFTVL---KL---------------LGLLQSPEKGINSVLDAALAPPETSG-V  221 (266)
Q Consensus       170 G~v~T~~~~-----~~----~~~~~~~~~~~~---~~---------------~~~~~~p~~~a~~~~~~~~~~~~~~G-~  221 (266)
                      +.+.++...     ..    ............   .+               ...+..++++|++++.++..+....| .
T Consensus       186 ~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~  265 (348)
T 1ek6_A          186 FNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCR  265 (348)
T ss_dssp             CEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEE
T ss_pred             ccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCce
Confidence            988766310     00    011111111111   00               01235689999999976654432333 5


Q ss_pred             eeecCCCcccc
Q 024553          222 YFFGGKGRTVN  232 (266)
Q Consensus       222 ~~~~~~g~~~~  232 (266)
                      .|+.+.++.+.
T Consensus       266 ~~ni~~~~~~s  276 (348)
T 1ek6_A          266 IYNLGTGTGYS  276 (348)
T ss_dssp             EEEECCSCCEE
T ss_pred             EEEeCCCCCcc
Confidence            66656666554

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.32  E-value=5.5e-12  Score=109.80  Aligned_cols=139  Identities=12%  Similarity=-0.044  Sum_probs=99.2

Q ss_pred             EEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcC
Q 024553           13 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS   92 (266)
Q Consensus        13 ~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~   92 (266)
                      +.++.+|+++.+++.+++++          .+++|+||||||.....  .+.+++++.+++|+.++..+++.+..    .
T Consensus        71 ~~~~~~Dl~d~~~~~~~~~~----------~~~~d~vih~A~~~~~~--~~~~~~~~~~~~Nv~g~~~ll~a~~~----~  134 (397)
T 1gy8_A           71 AALEVGDVRNEDFLNGVFTR----------HGPIDAVVHMCAFLAVG--ESVRDPLKYYDNNVVGILRLLQAMLL----H  134 (397)
T ss_dssp             CEEEESCTTCHHHHHHHHHH----------SCCCCEEEECCCCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHH----T
T ss_pred             EEEEECCCCCHHHHHHHHHh----------cCCCCEEEECCCccCcC--cchhhHHHHHHHHhHHHHHHHHHHHH----h
Confidence            88999999999998877652          24599999999986321  13456789999999999999998643    3


Q ss_pred             CCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcc
Q 024553           93 PVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVV  172 (266)
Q Consensus        93 ~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v  172 (266)
                      + .++||++||...+........  ........+..+..+...|+.+|.+.+.+++.++.++      +++++.+.||.+
T Consensus       135 ~-~~~iv~~SS~~v~g~~~~~~~--~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~------gi~~~ilRp~~v  205 (397)
T 1gy8_A          135 K-CDKIIFSSSAAIFGNPTMGSV--STNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY------GIKGICLRYFNA  205 (397)
T ss_dssp             T-CCEEEEEEEGGGTBSCCC-------CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH------CCEEEEEEECEE
T ss_pred             C-CCEEEEECCHHHhCCCCcccc--cccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH------CCcEEEEeccce
Confidence            3 579999999765432110000  0000111222333445789999999999999998885      689999999999


Q ss_pred             cCCc
Q 024553          173 KTNI  176 (266)
Q Consensus       173 ~T~~  176 (266)
                      .++.
T Consensus       206 ~G~~  209 (397)
T 1gy8_A          206 CGAH  209 (397)
T ss_dssp             ECCC
T ss_pred             eCCC
Confidence            8764

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.32  E-value=2.8e-11  Score=101.66  Aligned_cols=192  Identities=10%  Similarity=-0.036  Sum_probs=124.2

Q ss_pred             EEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcC
Q 024553           13 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS   92 (266)
Q Consensus        13 ~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~   92 (266)
                      +.++.+|+++.+++.++++.           .++|+|||+||.... ...+.++.++.+++|+.++..+++.+..    .
T Consensus        40 ~~~~~~D~~d~~~~~~~~~~-----------~~~d~Vih~A~~~~~-~~~~~~~~~~~~~~nv~gt~~ll~a~~~----~  103 (319)
T 4b8w_A           40 VSSKDADLTDTAQTRALFEK-----------VQPTHVIHLAAMVGG-LFRNIKYNLDFWRKNVHMNDNVLHSAFE----V  103 (319)
T ss_dssp             CCTTTCCTTSHHHHHHHHHH-----------SCCSEEEECCCCCCC-HHHHTTCHHHHHHHHHHHHHHHHHHHHH----T
T ss_pred             cCceecccCCHHHHHHHHhh-----------cCCCEEEECceeccc-ccccccCHHHHHHHHHHHHHHHHHHHHH----c
Confidence            33457899999998877752           258999999998532 1224456788999999999999888743    3


Q ss_pred             CCCCeEEEEcCCcccccccc-cCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCc
Q 024553           93 PVPSRIVNVTSFTHRNVFNA-QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV  171 (266)
Q Consensus        93 ~~~~~iv~vsS~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~  171 (266)
                      + ..++|++||...+..... .++.++...     ....+....|+.+|.+.+.+++.++++.      ++.++.+.|+.
T Consensus       104 ~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~-----~~~~p~~~~Y~~sK~~~E~~~~~~~~~~------~~~~~ilRp~~  171 (319)
T 4b8w_A          104 G-ARKVVSCLSTCIFPDKTTYPIDETMIHN-----GPPHNSNFGYSYAKRMIDVQNRAYFQQY------GCTFTAVIPTN  171 (319)
T ss_dssp             T-CSEEEEECCGGGSCSSCCSSBCGGGGGB-----SCCCSSSHHHHHHHHHHHHHHHHHHHHH------CCEEEEEEECE
T ss_pred             C-CCeEEEEcchhhcCCCCCCCcccccccc-----CCCCCCcchHHHHHHHHHHHHHHHHHhh------CCCEEEEeecc
Confidence            3 469999999876543211 111111000     1223333469999999999999988774      67899999999


Q ss_pred             ccCCccCcchh---HHHHHHHH----HHH--Hh---h------cCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          172 VKTNIMREVPS---FLSLMAFT----VLK--LL---G------LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       172 v~T~~~~~~~~---~~~~~~~~----~~~--~~---~------~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      +.++.......   ........    ...  ++   +      .+..++++|++++.++..++...|..|+.++++.+.
T Consensus       172 v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s  250 (319)
T 4b8w_A          172 VFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLREYNEVEPIILSVGEEDEVS  250 (319)
T ss_dssp             EECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHHHHHHHCCCSSCEEECCCGGGCEE
T ss_pred             ccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHHHHHhccccCCceEEEecCCCcee
Confidence            98776532110   11111111    111  11   1      235799999999987776555556677666666654

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.31  E-value=1.6e-11  Score=107.04  Aligned_cols=146  Identities=12%  Similarity=0.046  Sum_probs=100.5

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCC-CcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS-SRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      .++.++.+|+++.+++.++++.+           ++|+||||||..... ...+.+.++..+++|+.|+..+++.+.+. 
T Consensus        77 ~~v~~~~~Dl~d~~~~~~~~~~~-----------~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-  144 (404)
T 1i24_A           77 KSIELYVGDICDFEFLAESFKSF-----------EPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF-  144 (404)
T ss_dssp             CCCEEEESCTTSHHHHHHHHHHH-----------CCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred             CceEEEECCCCCHHHHHHHHhcc-----------CCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHh-
Confidence            46889999999999988877543           489999999986321 11234445678999999999999988653 


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCcccccc----CcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEE
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITG----KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVI  165 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~  165 (266)
                         +...+||++||.+.+......++...+..    .......+..+...|+.+|.+.+.+++.++.++      +++++
T Consensus       145 ---~~~~~~V~~SS~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------gi~~~  215 (404)
T 1i24_A          145 ---GEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW------GIRAT  215 (404)
T ss_dssp             ---CTTCEEEEECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH------CCEEE
T ss_pred             ---CCCcEEEEeCcHHHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc------CCeEE
Confidence               20259999999876543221111110000    000000133445679999999999999888774      78999


Q ss_pred             EecCCcccCCcc
Q 024553          166 AADPGVVKTNIM  177 (266)
Q Consensus       166 ~v~PG~v~T~~~  177 (266)
                      .+.||.|.++..
T Consensus       216 ivrp~~v~Gp~~  227 (404)
T 1i24_A          216 DLNQGVVYGVKT  227 (404)
T ss_dssp             EEEECEEECSCC
T ss_pred             EEecceeeCCCC
Confidence            999999988764

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.30  E-value=2e-10  Score=97.55  Aligned_cols=187  Identities=10%  Similarity=-0.045  Sum_probs=120.9

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      ..+.++.+|+++.+++.++++.+           ++|+|||+||....  ..+.+++++.+++|+.++..+++.+.+.  
T Consensus        63 ~~~~~~~~Dl~d~~~~~~~~~~~-----------~~d~Vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~~--  127 (335)
T 1rpn_A           63 GDIQYEDGDMADACSVQRAVIKA-----------QPQEVYNLAAQSFV--GASWNQPVTTGVVDGLGVTHLLEAIRQF--  127 (335)
T ss_dssp             GGEEEEECCTTCHHHHHHHHHHH-----------CCSEEEECCSCCCH--HHHTTSHHHHHHHHTHHHHHHHHHHHHH--
T ss_pred             CceEEEECCCCCHHHHHHHHHHc-----------CCCEEEECccccch--hhhhhChHHHHHHHHHHHHHHHHHHHHh--
Confidence            46889999999999988877544           48999999997532  2234567899999999999999988654  


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                        +..+++|++||...+......         ...+..+..+...|+.+|.+.+.+++.++.++      ++.++.+.|+
T Consensus       128 --~~~~~~v~~SS~~v~g~~~~~---------~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~------~~~~~i~r~~  190 (335)
T 1rpn_A          128 --SPETRFYQASTSEMFGLIQAE---------RQDENTPFYPRSPYGVAKLYGHWITVNYRESF------GLHASSGILF  190 (335)
T ss_dssp             --CTTSEEEEEEEGGGGCSCSSS---------SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCCEEEEEEC
T ss_pred             --CCCCeEEEEeCHHHhCCCCCC---------CCCcccCCCCCChhHHHHHHHHHHHHHHHHHc------CCcEEEEeeC
Confidence              202699999998765432110         11122233445679999999999999988775      4566667888


Q ss_pred             cccCCccCc-chhH-HHHHHHHHH-H--H---hh------cCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          171 VVKTNIMRE-VPSF-LSLMAFTVL-K--L---LG------LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       171 ~v~T~~~~~-~~~~-~~~~~~~~~-~--~---~~------~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      .+..+.... .... ......... .  +   ++      .+..++++|++++.++..+.  .+.| +.++++.+.
T Consensus       191 ~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~--~~~~-ni~~~~~~s  263 (335)
T 1rpn_A          191 NHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK--ADDY-VVATGVTTT  263 (335)
T ss_dssp             CEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS--CCCE-EECCSCEEE
T ss_pred             cccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHhcCC--CCEE-EEeCCCCcc
Confidence            776664332 1111 111100000 0  0   01      13467999999997765543  3554 445566554

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.29  E-value=4.8e-11  Score=103.40  Aligned_cols=189  Identities=11%  Similarity=0.005  Sum_probs=121.2

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      ++.++.+|+++.+++.+++             ..+|+|||+||.... ...+.+++++.+++|+.++..+++.+..    
T Consensus        73 ~v~~~~~Dl~d~~~~~~~~-------------~~~d~Vih~A~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----  134 (379)
T 2c5a_A           73 CDEFHLVDLRVMENCLKVT-------------EGVDHVFNLAADMGG-MGFIQSNHSVIMYNNTMISFNMIEAARI----  134 (379)
T ss_dssp             CSEEEECCTTSHHHHHHHH-------------TTCSEEEECCCCCCC-HHHHTTCHHHHHHHHHHHHHHHHHHHHH----
T ss_pred             CceEEECCCCCHHHHHHHh-------------CCCCEEEECceecCc-ccccccCHHHHHHHHHHHHHHHHHHHHH----
Confidence            5788999999999887766             258999999998532 1122466889999999999999998853    


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccccCcccCCC--CCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSK--CYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      .+ .++||++||...+.........    .....+..  +..+...|+.+|.+.+.+++.++.+.      +++++.+.|
T Consensus       135 ~~-~~~~V~~SS~~v~~~~~~~~~~----~~~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~------gi~~~ilrp  203 (379)
T 2c5a_A          135 NG-IKRFFYASSACIYPEFKQLETT----NVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF------GIECRIGRF  203 (379)
T ss_dssp             TT-CSEEEEEEEGGGSCGGGSSSSS----SCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH------CCEEEEEEE
T ss_pred             cC-CCEEEEEeehheeCCCCCCCcc----CCCcCcccCCCCCCCChhHHHHHHHHHHHHHHHHHH------CCCEEEEEe
Confidence            23 4699999997764421110000    00000111  23345679999999999999988774      689999999


Q ss_pred             CcccCCccCcch----hHHHHHHHHHH-HH-h---------hcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          170 GVVKTNIMREVP----SFLSLMAFTVL-KL-L---------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       170 G~v~T~~~~~~~----~~~~~~~~~~~-~~-~---------~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      |.+.++......    ....+...... .+ +         ..+..++++|++++.++..+  ..+.| +.++++.+.
T Consensus       204 ~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~--~~~~~-ni~~~~~~s  278 (379)
T 2c5a_A          204 HNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD--FREPV-NIGSDEMVS  278 (379)
T ss_dssp             CCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS--CCSCE-EECCCCCEE
T ss_pred             CceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHhhcc--CCCeE-EeCCCCccC
Confidence            999988653211    01111111100 01 1         12446999999999766543  33444 445555554

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.29  E-value=4.4e-11  Score=102.23  Aligned_cols=128  Identities=13%  Similarity=-0.017  Sum_probs=95.9

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      ..+.++.+|+++.+++.+++             ..+|+|||+||....    +.+.+++.+++|+.++..+++.+..   
T Consensus        56 ~~~~~~~~Dl~d~~~~~~~~-------------~~~d~vih~A~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~~---  115 (347)
T 4id9_A           56 TGGEEVVGSLEDGQALSDAI-------------MGVSAVLHLGAFMSW----APADRDRMFAVNVEGTRRLLDAASA---  115 (347)
T ss_dssp             SCCSEEESCTTCHHHHHHHH-------------TTCSEEEECCCCCCS----SGGGHHHHHHHHTHHHHHHHHHHHH---
T ss_pred             CCccEEecCcCCHHHHHHHH-------------hCCCEEEECCcccCc----chhhHHHHHHHHHHHHHHHHHHHHH---
Confidence            35678899999999887766             268999999997532    3344689999999999999998854   


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                       .+ .++||++||...+......       .....+..+..+...|+.+|.+.+.+++.++.+      .++.++.+.|+
T Consensus       116 -~~-~~~~V~~SS~~vyg~~~~~-------~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~------~~~~~~ilRp~  180 (347)
T 4id9_A          116 -AG-VRRFVFASSGEVYPENRPE-------FLPVTEDHPLCPNSPYGLTKLLGEELVRFHQRS------GAMETVILRFS  180 (347)
T ss_dssp             -TT-CSEEEEEEEGGGTTTTSCS-------SSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH------SSSEEEEEEEC
T ss_pred             -cC-CCeEEEECCHHHhCCCCCC-------CCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHh------cCCceEEEccc
Confidence             33 5699999997765421000       011222334555678999999999999988877      37899999999


Q ss_pred             ccc
Q 024553          171 VVK  173 (266)
Q Consensus       171 ~v~  173 (266)
                      ++.
T Consensus       181 ~v~  183 (347)
T 4id9_A          181 HTQ  183 (347)
T ss_dssp             EEE
T ss_pred             eEe
Confidence            997

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.29  E-value=4.4e-12  Score=101.93  Aligned_cols=178  Identities=12%  Similarity=-0.046  Sum_probs=113.8

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      ..+.++.+|+++.+++.++++             .+|+|||+||....        -.+.+++|+.++..+++.+..   
T Consensus        46 ~~~~~~~~Dl~d~~~~~~~~~-------------~~d~vi~~a~~~~~--------~~~~~~~n~~~~~~l~~~~~~---  101 (227)
T 3dhn_A           46 EHLKVKKADVSSLDEVCEVCK-------------GADAVISAFNPGWN--------NPDIYDETIKVYLTIIDGVKK---  101 (227)
T ss_dssp             TTEEEECCCTTCHHHHHHHHT-------------TCSEEEECCCC--------------CCSHHHHHHHHHHHHHHH---
T ss_pred             CceEEEEecCCCHHHHHHHhc-------------CCCEEEEeCcCCCC--------ChhHHHHHHHHHHHHHHHHHH---
Confidence            468999999999999877662             58999999987421        123788999999888887744   


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                       .+ .+++|++||..+....+....          +..+..+...|+.+|.+.+.+++.++++      .+++++.+.||
T Consensus       102 -~~-~~~~v~~Ss~~~~~~~~~~~~----------~~~~~~p~~~Y~~sK~~~e~~~~~~~~~------~~~~~~ilrp~  163 (227)
T 3dhn_A          102 -AG-VNRFLMVGGAGSLFIAPGLRL----------MDSGEVPENILPGVKALGEFYLNFLMKE------KEIDWVFFSPA  163 (227)
T ss_dssp             -TT-CSEEEEECCSTTSEEETTEEG----------GGTTCSCGGGHHHHHHHHHHHHHTGGGC------CSSEEEEEECC
T ss_pred             -hC-CCEEEEeCChhhccCCCCCcc----------ccCCcchHHHHHHHHHHHHHHHHHHhhc------cCccEEEEeCC
Confidence             33 469999999875432211110          0123344577999999999888776654      58999999999


Q ss_pred             cccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCccc
Q 024553          171 VVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  231 (266)
Q Consensus       171 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~  231 (266)
                      ++.++......................+.+++++|++++.++..++ ..|+-|...+.++.
T Consensus       164 ~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ai~~~l~~~~-~~g~~~~~~~~~~~  223 (227)
T 3dhn_A          164 ADMRPGVRTGRYRLGKDDMIVDIVGNSHISVEDYAAAMIDELEHPK-HHQERFTIGYLEHH  223 (227)
T ss_dssp             SEEESCCCCCCCEEESSBCCCCTTSCCEEEHHHHHHHHHHHHHSCC-CCSEEEEEECCSCC
T ss_pred             cccCCCccccceeecCCCcccCCCCCcEEeHHHHHHHHHHHHhCcc-ccCcEEEEEeehhc
Confidence            9977653321000000000000000134589999999997766654 44555554444444

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.28  E-value=1.3e-10  Score=99.11  Aligned_cols=196  Identities=13%  Similarity=0.036  Sum_probs=120.6

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .++.++.+|+++.+++.++++            +++|+||||||...   ..+.+++++.+++|+.++..+++.+.+...
T Consensus        64 ~~~~~~~~Dl~d~~~~~~~~~------------~~~d~vih~A~~~~---~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~  128 (342)
T 2hrz_A           64 GAVDARAADLSAPGEAEKLVE------------ARPDVIFHLAAIVS---GEAELDFDKGYRINLDGTRYLFDAIRIANG  128 (342)
T ss_dssp             SEEEEEECCTTSTTHHHHHHH------------TCCSEEEECCCCCH---HHHHHCHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             CceeEEEcCCCCHHHHHHHHh------------cCCCEEEECCccCc---ccccccHHHHHHHHHHHHHHHHHHHHhccc
Confidence            468899999999998877663            26899999999853   123467889999999999999999877543


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec--
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD--  168 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~--  168 (266)
                      +.+..++||++||.+.+.....         ....+..+..+...|+.+|.+.+.+++.++.+... ....+++..+.  
T Consensus       129 ~~~~~~~iv~~SS~~~~~~~~~---------~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~ir~~~v~g~  198 (342)
T 2hrz_A          129 KDGYKPRVVFTSSIAVFGAPLP---------YPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFF-DGIGIRLPTICIR  198 (342)
T ss_dssp             HHCCCCEEEEEEEGGGCCSSCC---------SSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSC-EEEEEEECEETTC
T ss_pred             ccCCCcEEEEeCchHhhCCCCC---------CCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCC-CceeEEeeeEEec
Confidence            2211369999999876542211         01112223334578999999999999988876421 02235666665  


Q ss_pred             CCcccCCccCcchhHHHHHHHHHH--HHhh-----cCCCHHHHHHHHHHHhcCCCC--cccceeecCCCcccc
Q 024553          169 PGVVKTNIMREVPSFLSLMAFTVL--KLLG-----LLQSPEKGINSVLDAALAPPE--TSGVYFFGGKGRTVN  232 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~~~~~--~~~~-----~~~~p~~~a~~~~~~~~~~~~--~~G~~~~~~~g~~~~  232 (266)
                      ||.+.+..................  .+.+     .+..++++|++++.++..+..  ..+..|+.. |+.+.
T Consensus       199 pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~-g~~~s  270 (342)
T 2hrz_A          199 PGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMP-GLSAT  270 (342)
T ss_dssp             CSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECC-CEEEE
T ss_pred             CCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHHHHHHHhccccccCCccEEEcC-CCCCC
Confidence            876654321111110000000000  0000     135799999999977655432  235556543 44443

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.28  E-value=2.9e-11  Score=104.75  Aligned_cols=185  Identities=11%  Similarity=0.035  Sum_probs=117.6

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      ..+.++.+|+++.+++.+++             .++|+|||+||....  ..+.+++++.+++|+.++..+++.+.    
T Consensus        78 ~~v~~~~~Dl~d~~~l~~~~-------------~~~d~Vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~ll~a~~----  138 (377)
T 2q1s_A           78 PAVRFSETSITDDALLASLQ-------------DEYDYVFHLATYHGN--QSSIHDPLADHENNTLTTLKLYERLK----  138 (377)
T ss_dssp             TTEEEECSCTTCHHHHHHCC-------------SCCSEEEECCCCSCH--HHHHHCHHHHHHHHTHHHHHHHHHHT----
T ss_pred             CceEEEECCCCCHHHHHHHh-------------hCCCEEEECCCccCc--hhhhhCHHHHHHHHHHHHHHHHHHHH----
Confidence            46889999999988776543             378999999997532  12345678999999999999998873    


Q ss_pred             cC-CCCCeEEEEcCCcccccccc-cCCccccccCcccCCC---CC-ChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEE
Q 024553           91 NS-PVPSRIVNVTSFTHRNVFNA-QVNNETITGKFFLRSK---CY-PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSV  164 (266)
Q Consensus        91 ~~-~~~~~iv~vsS~~~~~~~~~-~~~~~~~~~~~~~~~~---~~-~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v  164 (266)
                      +. + .++||++||...+..... .++.        .+..   +. .+...|+.+|.+.+.+++.++.++      ++++
T Consensus       139 ~~~~-~~~~V~~SS~~vyg~~~~~~~~~--------~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~------gi~~  203 (377)
T 2q1s_A          139 HFKR-LKKVVYSAAGCSIAEKTFDDAKA--------TEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH------QLPT  203 (377)
T ss_dssp             TCSS-CCEEEEEEEC----------------------CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH------CCCE
T ss_pred             HhCC-CCeEEEeCCHHHcCCCCCCCcCc--------ccccccccccCCCCchHHHHHHHHHHHHHHHHHh------CCCE
Confidence            33 3 569999999875432111 0110        0111   22 345679999999999999988774      6889


Q ss_pred             EEecCCcccCCcc---------Ccc---hhHHHHHHHHHH--HHh---------hcCCCHHHHHHH-HHHHhcCCCCccc
Q 024553          165 IAADPGVVKTNIM---------REV---PSFLSLMAFTVL--KLL---------GLLQSPEKGINS-VLDAALAPPETSG  220 (266)
Q Consensus       165 ~~v~PG~v~T~~~---------~~~---~~~~~~~~~~~~--~~~---------~~~~~p~~~a~~-~~~~~~~~~~~~G  220 (266)
                      +.+.||.+.++..         ...   ............  .++         ..+..++++|++ ++.++..+.  .|
T Consensus       204 ~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~--~g  281 (377)
T 2q1s_A          204 VRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDVANGLIACAADGTP--GG  281 (377)
T ss_dssp             EEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCCT--TE
T ss_pred             EEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcCC--CC
Confidence            9999999988765         210   011111111000  011         123458999999 887665543  67


Q ss_pred             ceeecCCCcccc
Q 024553          221 VYFFGGKGRTVN  232 (266)
Q Consensus       221 ~~~~~~~g~~~~  232 (266)
                       .|..++++.+.
T Consensus       282 -~~~i~~~~~~s  292 (377)
T 2q1s_A          282 -VYNIASGKETS  292 (377)
T ss_dssp             -EEECCCCCCEE
T ss_pred             -eEEecCCCcee
Confidence             66666666554

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.28  E-value=5.5e-12  Score=102.72  Aligned_cols=170  Identities=12%  Similarity=-0.038  Sum_probs=108.9

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCC-----------CcCCCcccchhhhhhhhhHHH
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS-----------SRLTPEGYDQMMSTNYIGAFF   80 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~-----------~~~~~~~~~~~~~~n~~~~~~   80 (266)
                      ++.++.+|+++.+++.+++             ..+|+||||||.....           .....+.+++.+++|+.++..
T Consensus        49 ~~~~~~~D~~d~~~~~~~~-------------~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~  115 (253)
T 1xq6_A           49 EADVFIGDITDADSINPAF-------------QGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKN  115 (253)
T ss_dssp             CTTEEECCTTSHHHHHHHH-------------TTCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHH
T ss_pred             CeeEEEecCCCHHHHHHHH-------------cCCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHH
Confidence            4678999999999887766             2589999999976321           122334556789999999999


Q ss_pred             HHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCCh--hhcchHhHHHHHHHHHHHHHhhCCCC
Q 024553           81 LTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPC--ARIYEYSKLCLLIFSYELHRNLGLDK  158 (266)
Q Consensus        81 l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~sK~~~~~~~~~la~~~~~~~  158 (266)
                      +++.+...    + .++||++||..+...                 ..+...  ...|..+|.+.+.+++          
T Consensus       116 l~~~~~~~----~-~~~iv~~SS~~~~~~-----------------~~~~~~~~~~~y~~sK~~~e~~~~----------  163 (253)
T 1xq6_A          116 QIDAAKVA----G-VKHIVVVGSMGGTNP-----------------DHPLNKLGNGNILVWKRKAEQYLA----------  163 (253)
T ss_dssp             HHHHHHHH----T-CSEEEEEEETTTTCT-----------------TCGGGGGGGCCHHHHHHHHHHHHH----------
T ss_pred             HHHHHHHc----C-CCEEEEEcCccCCCC-----------------CCccccccchhHHHHHHHHHHHHH----------
Confidence            88887543    2 469999999875310                 001111  1347779999888764          


Q ss_pred             CCCeEEEEecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCC
Q 024553          159 SRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKG  228 (266)
Q Consensus       159 ~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g  228 (266)
                      ..+++++.+.||++.++............. ........+.+++++|+.+++++..+ ...|..|..+++
T Consensus       164 ~~~i~~~~vrpg~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dva~~~~~~~~~~-~~~g~~~~i~~~  231 (253)
T 1xq6_A          164 DSGTPYTIIRAGGLLDKEGGVRELLVGKDD-ELLQTDTKTVPRADVAEVCIQALLFE-EAKNKAFDLGSK  231 (253)
T ss_dssp             TSSSCEEEEEECEEECSCSSSSCEEEESTT-GGGGSSCCEEEHHHHHHHHHHHTTCG-GGTTEEEEEEEC
T ss_pred             hCCCceEEEecceeecCCcchhhhhccCCc-CCcCCCCcEEcHHHHHHHHHHHHcCc-cccCCEEEecCC
Confidence            358999999999998876432100000000 00001123568999999999765543 345655554443

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.28  E-value=4.7e-11  Score=101.64  Aligned_cols=185  Identities=14%  Similarity=0.095  Sum_probs=114.3

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      ++.++.+|+++.+++.+++             ..+|+|||+||... ..  ..+..++.+++|+.|+..+++.+.+..  
T Consensus        57 ~~~~~~~Dl~d~~~~~~~~-------------~~~d~Vih~A~~~~-~~--~~~~~~~~~~~nv~gt~~ll~a~~~~~--  118 (337)
T 2c29_D           57 HLTLWKADLADEGSFDEAI-------------KGCTGVFHVATPMD-FE--SKDPENEVIKPTIEGMLGIMKSCAAAK--  118 (337)
T ss_dssp             HEEEEECCTTSTTTTHHHH-------------TTCSEEEECCCCCC-SS--CSSHHHHTHHHHHHHHHHHHHHHHHHS--
T ss_pred             eEEEEEcCCCCHHHHHHHH-------------cCCCEEEEeccccC-CC--CCChHHHHHHHHHHHHHHHHHHHHhCC--
Confidence            5889999999998887665             25799999998642 11  122335689999999999999987643  


Q ss_pred             CCCCCeEEEEcCCcccccccc---cCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           92 SPVPSRIVNVTSFTHRNVFNA---QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                       . .++||++||.++......   .++.+........ ....+....|+.+|.+.+.+++.++++      .+++++.+.
T Consensus       119 -~-~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~-~~~~~~~~~Y~~sK~~~E~~~~~~~~~------~gi~~~~lr  189 (337)
T 2c29_D          119 -T-VRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFC-RAKKMTAWMYFVSKTLAEQAAWKYAKE------NNIDFITII  189 (337)
T ss_dssp             -C-CCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHH-HHHCCTTHHHHHHHHHHHHHHHHHHHH------HTCCEEEEE
T ss_pred             -C-ccEEEEeeeHhhcccCCCCCcccCcccCCchhhh-cccCCccchHHHHHHHHHHHHHHHHHH------cCCcEEEEe
Confidence             1 369999999874321110   0010000000000 000012346999999999998877655      378999999


Q ss_pred             CCcccCCccCc-chhHHHHH---HH-----HHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceee
Q 024553          169 PGVVKTNIMRE-VPSFLSLM---AF-----TVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFF  224 (266)
Q Consensus       169 PG~v~T~~~~~-~~~~~~~~---~~-----~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~  224 (266)
                      ||.|.++.... ........   ..     .......++..++|+|++++.++.. +...|.|+.
T Consensus       190 p~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~v~Dva~a~~~~~~~-~~~~~~~~~  253 (337)
T 2c29_D          190 PTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHIYLFEN-PKAEGRYIC  253 (337)
T ss_dssp             ECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHHTEEEEEEHHHHHHHHHHHHHC-TTCCEEEEE
T ss_pred             CCceECCCCCCCCCchHHHHHHHHcCCCccccccCCCCEEEHHHHHHHHHHHhcC-cccCceEEE
Confidence            99999987543 22211110   00     0001122367999999999976543 344566643

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.28  E-value=2.5e-11  Score=104.26  Aligned_cols=181  Identities=10%  Similarity=-0.032  Sum_probs=119.9

Q ss_pred             EEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCCC
Q 024553           16 FQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVP   95 (266)
Q Consensus        16 i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~   95 (266)
                      +.+|+++.+.++.+++..        .++++|+|||+||....    +.+++++.+++|+.++..+++.+.+.    + .
T Consensus        94 ~~~d~~~~~~~~~~~~~~--------~~~~~d~Vih~A~~~~~----~~~~~~~~~~~n~~~~~~ll~a~~~~----~-~  156 (357)
T 2x6t_A           94 IADYMDKEDFLIQIMAGE--------EFGDVEAIFHEGACSST----TEWDGKYMMDNNYQYSKELLHYCLER----E-I  156 (357)
T ss_dssp             CSEEEEHHHHHHHHHTTC--------CCSSCCEEEECCSCCCT----TCCCHHHHHHHTHHHHHHHHHHHHHH----T-C
T ss_pred             EeeecCcHHHHHHHHhhc--------ccCCCCEEEECCcccCC----ccCCHHHHHHHHHHHHHHHHHHHHHc----C-C
Confidence            668888888877766421        23579999999998643    45668899999999999999998662    3 4


Q ss_pred             CeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcccCC
Q 024553           96 SRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN  175 (266)
Q Consensus        96 ~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~T~  175 (266)
                       +||++||...+.......         ..+..+..+...|+.+|.+.+.+++.++.+      .++.++.+.||.+.++
T Consensus       157 -r~V~~SS~~v~g~~~~~~---------~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~------~g~~~~ilRp~~v~Gp  220 (357)
T 2x6t_A          157 -PFLYASSAATYGGRTSDF---------IESREYEKPLNVFGYSKFLFDEYVRQILPE------ANSQIVGFRYFNVYGP  220 (357)
T ss_dssp             -CEEEEEEGGGGCSCSSCC---------CSSGGGCCCSSHHHHHHHHHHHHHHHHGGG------CSSCEEEEEECEEESS
T ss_pred             -eEEEEcchHHhCCCCCCC---------cCCcCCCCCCChhHHHHHHHHHHHHHHHHH------cCCCEEEEecCeEECC
Confidence             999999987654321111         111112233567999999999999988766      3789999999999887


Q ss_pred             ccCcch---hHHHHHHHHHH-----------HH-hhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          176 IMREVP---SFLSLMAFTVL-----------KL-LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       176 ~~~~~~---~~~~~~~~~~~-----------~~-~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      ......   ...........           .. ...+..++++|++++.++..+.   |..|..++|+.+.
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~---~~~~~i~~~~~~s  289 (357)
T 2x6t_A          221 REGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV---SGIFNLGTGRAES  289 (357)
T ss_dssp             SCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHHCC---CEEEEESCSCCEE
T ss_pred             CCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhcCC---CCeEEecCCCccc
Confidence            543110   11111100000           01 2234689999999997765544   5556656666554

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.28  E-value=2.2e-11  Score=102.94  Aligned_cols=184  Identities=14%  Similarity=0.081  Sum_probs=113.3

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcc-cchhhhhhhhhHHHHHHhhHHHHh
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEG-YDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      ++.++.+|+++.+++.++++             .+|+|||+|+..    ..+.++ +++.+++|+.|++.+++.+.+.. 
T Consensus        54 ~~~~~~~Dl~d~~~~~~~~~-------------~~d~vih~A~~~----~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~-  115 (322)
T 2p4h_X           54 KLHFFNADLSNPDSFAAAIE-------------GCVGIFHTASPI----DFAVSEPEEIVTKRTVDGALGILKACVNSK-  115 (322)
T ss_dssp             HEEECCCCTTCGGGGHHHHT-------------TCSEEEECCCCC------------CHHHHHHHHHHHHHHHHHTTCS-
T ss_pred             ceEEEecCCCCHHHHHHHHc-------------CCCEEEEcCCcc----cCCCCChHHHHHHHHHHHHHHHHHHHHhcC-
Confidence            57889999999998877652             479999999753    112222 45699999999999999886541 


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCC---------CChhhcchHhHHHHHHHHHHHHHhhCCCCCCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKC---------YPCARIYEYSKLCLLIFSYELHRNLGLDKSRH  161 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~  161 (266)
                        + .++||++||..+....+.. .      ....+...         .+....|+.+|.+.+.+++.++.+      .+
T Consensus       116 --~-~~~iV~~SS~~~~~~~~~~-~------~~~~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~------~g  179 (322)
T 2p4h_X          116 --T-VKRFIYTSSGSAVSFNGKD-K------DVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ------NG  179 (322)
T ss_dssp             --S-CCEEEEEEEGGGTSCSSSC-C------SEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH------TT
T ss_pred             --C-ccEEEEeccHHHcccCCCC-C------eecCCccccchhhhcccCcccccHHHHHHHHHHHHHHHHHh------cC
Confidence              2 4799999998743221100 0      00001100         011126999999888887766554      47


Q ss_pred             eEEEEecCCcccCCccCcc-hhHHHHHHHHHH---HHhh----cCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          162 VSVIAADPGVVKTNIMREV-PSFLSLMAFTVL---KLLG----LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       162 i~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~---~~~~----~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      ++++.+.||+|.++..... +...........   ..+.    .+..++|+|++++.++..+ ..+|.| . ..++.+.
T Consensus       180 i~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~a~~~~~~~~-~~~g~~-~-~~~~~~s  255 (322)
T 2p4h_X          180 IDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHIYLLENS-VPGGRY-N-CSPFIVP  255 (322)
T ss_dssp             CCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCEEEEEEEEHHHHHHHHHHHHHSC-CCCEEE-E-CCCEEEE
T ss_pred             CcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcCCCcCEEEHHHHHHHHHHHhhCc-CCCCCE-E-EcCCCCC
Confidence            8999999999999875432 211111100000   0011    2569999999999766443 356774 4 3445443

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.27  E-value=1.1e-10  Score=98.24  Aligned_cols=180  Identities=12%  Similarity=0.022  Sum_probs=119.7

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      .+.++.+|++ .+++.+++             .++|+|||+||.....      +.++.+++|+.++..+++.+..    
T Consensus        43 ~~~~~~~Dl~-~~~~~~~~-------------~~~d~Vih~a~~~~~~------~~~~~~~~n~~~~~~ll~a~~~----   98 (311)
T 3m2p_A           43 DYEYRVSDYT-LEDLINQL-------------NDVDAVVHLAATRGSQ------GKISEFHDNEILTQNLYDACYE----   98 (311)
T ss_dssp             CCEEEECCCC-HHHHHHHT-------------TTCSEEEECCCCCCSS------SCGGGTHHHHHHHHHHHHHHHH----
T ss_pred             ceEEEEcccc-HHHHHHhh-------------cCCCEEEEccccCCCC------ChHHHHHHHHHHHHHHHHHHHH----
Confidence            5788999999 88776655             2689999999986432      5678999999999998888843    


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCc
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV  171 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~  171 (266)
                      .+ ..++|++||...+.....         ....+..+..+...|+.+|.+.+.+++.++.+      .++.++.+.||.
T Consensus        99 ~~-~~r~v~~SS~~vyg~~~~---------~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~------~g~~~~ilRp~~  162 (311)
T 3m2p_A           99 NN-ISNIVYASTISAYSDETS---------LPWNEKELPLPDLMYGVSKLACEHIGNIYSRK------KGLCIKNLRFAH  162 (311)
T ss_dssp             TT-CCEEEEEEEGGGCCCGGG---------CSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHH------SCCEEEEEEECE
T ss_pred             cC-CCEEEEEccHHHhCCCCC---------CCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH------cCCCEEEEeeCc
Confidence            33 468999999776542211         11122234444678999999999999988876      478999999999


Q ss_pred             ccCCccCcchhHHHHHHHHHH-HHh---------hcCCCHHHHHHHHHHHhcCCCCcccceeecCCCccccC
Q 024553          172 VKTNIMREVPSFLSLMAFTVL-KLL---------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNS  233 (266)
Q Consensus       172 v~T~~~~~~~~~~~~~~~~~~-~~~---------~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~~  233 (266)
                      +.++..........+...... .++         ..+..++++|++++.++..+.  .|..|+.++++.+.+
T Consensus       163 v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~--~~~~~~i~~~~~~s~  232 (311)
T 3m2p_A          163 LYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEK--VSGTFNIGSGDALTN  232 (311)
T ss_dssp             EECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTT--CCEEEEECCSCEECH
T ss_pred             eeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCC--CCCeEEeCCCCcccH
Confidence            988765432111111111000 000         123578899999996654443  555666566666643

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.27  E-value=2e-11  Score=97.80  Aligned_cols=132  Identities=8%  Similarity=0.009  Sum_probs=94.2

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      ...+.++.+|+++.+++.+++             ..+|+||||||..                 |+.     ++.+++.+
T Consensus        51 ~~~~~~~~~D~~d~~~~~~~~-------------~~~d~vv~~ag~~-----------------n~~-----~~~~~~~~   95 (221)
T 3r6d_A           51 HERVTVIEGSFQNPGXLEQAV-------------TNAEVVFVGAMES-----------------GSD-----MASIVKAL   95 (221)
T ss_dssp             STTEEEEECCTTCHHHHHHHH-------------TTCSEEEESCCCC-----------------HHH-----HHHHHHHH
T ss_pred             CCceEEEECCCCCHHHHHHHH-------------cCCCEEEEcCCCC-----------------Chh-----HHHHHHHH
Confidence            346899999999999988776             2589999999963                 332     78888888


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhh----------cchHhHHHHHHHHHHHHHhhCCCCC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCAR----------IYEYSKLCLLIFSYELHRNLGLDKS  159 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~Y~~sK~~~~~~~~~la~~~~~~~~  159 (266)
                      ++.+ .++||++||..++..                    .+...          .|..+|.+++.+++          .
T Consensus        96 ~~~~-~~~iv~iSs~~~~~~--------------------~~~~~~~~~~~~~~~~y~~~K~~~e~~~~----------~  144 (221)
T 3r6d_A           96 SRXN-IRRVIGVSMAGLSGE--------------------FPVALEKWTFDNLPISYVQGERQARNVLR----------E  144 (221)
T ss_dssp             HHTT-CCEEEEEEETTTTSC--------------------SCHHHHHHHHHTSCHHHHHHHHHHHHHHH----------H
T ss_pred             HhcC-CCeEEEEeeceecCC--------------------CCcccccccccccccHHHHHHHHHHHHHH----------h
Confidence            8776 689999999886431                    12222          79999999988774          2


Q ss_pred             CCeEEEEecCCcccCC-ccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHh
Q 024553          160 RHVSVIAADPGVVKTN-IMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAA  212 (266)
Q Consensus       160 ~~i~v~~v~PG~v~T~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~  212 (266)
                      .+++++.|.||++.++ ............     ...+...+++|+|+.+++++
T Consensus       145 ~~i~~~~vrpg~v~~~~~~~~~~~~~~~~-----~~~~~~~~~~dvA~~~~~l~  193 (221)
T 3r6d_A          145 SNLNYTILRLTWLYNDPEXTDYELIPEGA-----QFNDAQVSREAVVKAIFDIL  193 (221)
T ss_dssp             SCSEEEEEEECEEECCTTCCCCEEECTTS-----CCCCCEEEHHHHHHHHHHHH
T ss_pred             CCCCEEEEechhhcCCCCCcceeeccCCc-----cCCCceeeHHHHHHHHHHHH
Confidence            5899999999999887 332221110000     00112458999999999877

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.27  E-value=7.7e-11  Score=99.92  Aligned_cols=188  Identities=10%  Similarity=0.016  Sum_probs=122.8

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      ++.++.+|+++.+++.+++++           .++|+|||+||.....  .+.+++++.+++|+.++..+++.+..    
T Consensus        45 ~~~~~~~D~~~~~~~~~~~~~-----------~~~d~vih~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~----  107 (330)
T 2c20_A           45 GAKFYNGDLRDKAFLRDVFTQ-----------ENIEAVMHFAADSLVG--VSMEKPLQYYNNNVYGALCLLEVMDE----  107 (330)
T ss_dssp             TSEEEECCTTCHHHHHHHHHH-----------SCEEEEEECCCCCCHH--HHHHSHHHHHHHHHHHHHHHHHHHHH----
T ss_pred             CcEEEECCCCCHHHHHHHHhh-----------cCCCEEEECCcccCcc--ccccCHHHHHHHHhHHHHHHHHHHHH----
Confidence            578899999999988777642           3699999999985321  13456789999999999999988743    


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCc
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV  171 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~  171 (266)
                      .+ .+++|++||...+....         +....+..+..+...|+.+|.+.+.+++.++.+      .+++++.+.||.
T Consensus       108 ~~-~~~~v~~Ss~~~~~~~~---------~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~------~~~~~~ilrp~~  171 (330)
T 2c20_A          108 FK-VDKFIFSSTAATYGEVD---------VDLITEETMTNPTNTYGETKLAIEKMLHWYSQA------SNLRYKIFRYFN  171 (330)
T ss_dssp             TT-CCEEEEECCGGGGCSCS---------SSSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHT------SSCEEEEEECSE
T ss_pred             cC-CCEEEEeCCceeeCCCC---------CCCCCcCCCCCCCChHHHHHHHHHHHHHHHHHH------hCCcEEEEecCc
Confidence            33 57999999987653211         011122233344578999999999999988876      378999999999


Q ss_pred             ccCCccCc--------chhHHHHHHHHHHH---Hh---------------hcCCCHHHHHHHHHHHhcCCCC-cccceee
Q 024553          172 VKTNIMRE--------VPSFLSLMAFTVLK---LL---------------GLLQSPEKGINSVLDAALAPPE-TSGVYFF  224 (266)
Q Consensus       172 v~T~~~~~--------~~~~~~~~~~~~~~---~~---------------~~~~~p~~~a~~~~~~~~~~~~-~~G~~~~  224 (266)
                      +.++....        ..............   .+               ..+...+++|++++.++..+.. ..+..|+
T Consensus       172 v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~n  251 (330)
T 2c20_A          172 VAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHFLGLKDLQNGGESDFYN  251 (330)
T ss_dssp             EECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred             ccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHHHHHHhccccCCCCCeEE
Confidence            98774211        01111111110000   00               0134689999999976654322 2345666


Q ss_pred             cCCCcccc
Q 024553          225 GGKGRTVN  232 (266)
Q Consensus       225 ~~~g~~~~  232 (266)
                      .++++.+.
T Consensus       252 i~~~~~~s  259 (330)
T 2c20_A          252 LGNGNGFS  259 (330)
T ss_dssp             CCCTTCBC
T ss_pred             eCCCCCcc
Confidence            56666554

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.25  E-value=1.1e-11  Score=109.17  Aligned_cols=186  Identities=11%  Similarity=0.096  Sum_probs=116.5

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .++.++.+|+++.+++.       .       ..++|+||||||....     .+.+++.+++|+.++..+++.+.+   
T Consensus       130 ~~v~~v~~Dl~d~~~l~-------~-------~~~~d~Vih~A~~~~~-----~~~~~~~~~~Nv~g~~~l~~aa~~---  187 (427)
T 4f6c_A          130 SNIEVIVGDFECMDDVV-------L-------PENMDTIIHAGARTDH-----FGDDDEFEKVNVQGTVDVIRLAQQ---  187 (427)
T ss_dssp             TTEEEEEECC---CCCC-------C-------SSCCSEEEECCCCC------------CHHHHHHHHHHHHHHHHHH---
T ss_pred             CceEEEeCCCCCcccCC-------C-------cCCCCEEEECCcccCC-----CCCHHHHHHHHHHHHHHHHHHHHh---
Confidence            47899999999988776       1       2589999999998642     346789999999999999999876   


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCC---CChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKC---YPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                        + ..++|++||..+ ...... ...   ...+.+...   ......|+.+|.+.+.+++.++.       .+++++.+
T Consensus       188 --~-~~~~v~~SS~~~-G~~~~~-~~~---~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-------~g~~~~iv  252 (427)
T 4f6c_A          188 --H-HARLIYVSTISV-GTYFDI-DTE---DVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN-------NGLDGRIV  252 (427)
T ss_dssp             --T-TCEEEEEEEGGG-GSEECS-SCS---CCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH-------TTCCEEEE
T ss_pred             --c-CCcEEEECchHh-CCCccC-CCC---CccccccccccCCCCCCchHHHHHHHHHHHHHHHH-------cCCCEEEE
Confidence              2 579999999876 211000 000   001111111   23567899999999999987643       47899999


Q ss_pred             cCCcccCCccCcch------hHHHHHHHHHHH----------HhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCccc
Q 024553          168 DPGVVKTNIMREVP------SFLSLMAFTVLK----------LLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  231 (266)
Q Consensus       168 ~PG~v~T~~~~~~~------~~~~~~~~~~~~----------~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~  231 (266)
                      .||.|.++......      ............          ....+..++++|++++.++..+.  .|..|..++++.+
T Consensus       253 Rpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~--~g~~~~l~~~~~~  330 (427)
T 4f6c_A          253 RVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT--PQIIYHVLSPNKM  330 (427)
T ss_dssp             EECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSCC--CCSEEEESCSCCE
T ss_pred             eCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCCccccceEEEeeHHHHHHHHHHHHcCCC--CCCEEEecCCCCC
Confidence            99999887654420      001011111000          01125678999999997665544  6666666777766


Q ss_pred             cCCc
Q 024553          232 NSSA  235 (266)
Q Consensus       232 ~~~~  235 (266)
                      .+..
T Consensus       331 s~~e  334 (427)
T 4f6c_A          331 PVKS  334 (427)
T ss_dssp             EHHH
T ss_pred             cHHH
Confidence            5433

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.23  E-value=2.1e-11  Score=102.38  Aligned_cols=182  Identities=11%  Similarity=-0.029  Sum_probs=116.8

Q ss_pred             EEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCCC
Q 024553           16 FQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVP   95 (266)
Q Consensus        16 i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~   95 (266)
                      +.+|+++.+.++++++..        ..+++|+|||+||....    +.+++++.+++|+.++..+++.+...    + .
T Consensus        47 ~~~d~~~~~~~~~~~~~~--------~~~~~d~vi~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~  109 (310)
T 1eq2_A           47 IADYMDKEDFLIQIMAGE--------EFGDVEAIFHEGACSST----TEWDGKYMMDNNYQYSKELLHYCLER----E-I  109 (310)
T ss_dssp             CSEEEEHHHHHHHHHTTC--------CCSSCCEEEECCSCCCT----TCCCHHHHHHHTHHHHHHHHHHHHHH----T-C
T ss_pred             eccccccHHHHHHHHhcc--------ccCCCcEEEECcccccC----cccCHHHHHHHHHHHHHHHHHHHHHc----C-C
Confidence            567888777766555311        11369999999998643    44567899999999999999988553    3 4


Q ss_pred             CeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcccCC
Q 024553           96 SRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN  175 (266)
Q Consensus        96 ~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~T~  175 (266)
                       ++|++||...+.......         ..+..+..+...|+.+|.+.+.+++.++.+      .+++++.+.||.+.++
T Consensus       110 -~~v~~SS~~v~g~~~~~~---------~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~------~g~~~~~lrp~~v~G~  173 (310)
T 1eq2_A          110 -PFLYASSAATYGGRTSDF---------IESREYEKPLNVYGYSKFLFDEYVRQILPE------ANSQIVGFRYFNVYGP  173 (310)
T ss_dssp             -CEEEEEEGGGGTTCCSCB---------CSSGGGCCCSSHHHHHHHHHHHHHHHHGGG------CSSCEEEEEECEEESS
T ss_pred             -eEEEEeeHHHhCCCCCCC---------CCCCCCCCCCChhHHHHHHHHHHHHHHHHH------cCCCEEEEeCCcEECc
Confidence             999999987654221101         111112233567999999999999888765      4789999999999887


Q ss_pred             ccCc------chh-HHHHHH-HHH------HHH-hhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCccccC
Q 024553          176 IMRE------VPS-FLSLMA-FTV------LKL-LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNS  233 (266)
Q Consensus       176 ~~~~------~~~-~~~~~~-~~~------~~~-~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~~  233 (266)
                      ....      ... ...... ...      ... ...+..++++|++++.++..+.   |..|..++|+.+.+
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~~---~~~~~i~~~~~~s~  243 (310)
T 1eq2_A          174 REGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV---SGIFNLGTGRAESF  243 (310)
T ss_dssp             SCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC---CEEEEESCSCCBCH
T ss_pred             CCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcCC---CCeEEEeCCCccCH
Confidence            6431      111 100000 000      011 2234679999999997766544   45555566665544

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.23  E-value=4.2e-10  Score=100.50  Aligned_cols=189  Identities=12%  Similarity=0.073  Sum_probs=115.5

Q ss_pred             ccEEEEEecCCC------HHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHh
Q 024553           11 ARLEAFQVDLSS------FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKL   84 (266)
Q Consensus        11 ~~~~~i~~Dls~------~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~   84 (266)
                      .++.++.+|+++      .+.+.++++             .+|+||||||....      +.+++.+++|+.++..+++.
T Consensus       140 ~~v~~v~~Dl~~~~~gld~~~~~~~~~-------------~~D~Vih~Aa~~~~------~~~~~~~~~Nv~gt~~ll~a  200 (478)
T 4dqv_A          140 DRLEVVAGDKSEPDLGLDQPMWRRLAE-------------TVDLIVDSAAMVNA------FPYHELFGPNVAGTAELIRI  200 (478)
T ss_dssp             TTEEEEECCTTSGGGGCCHHHHHHHHH-------------HCCEEEECCSSCSB------SSCCEEHHHHHHHHHHHHHH
T ss_pred             CceEEEEeECCCcccCCCHHHHHHHHc-------------CCCEEEECccccCC------cCHHHHHHHHHHHHHHHHHH
Confidence            579999999994      445555442             48999999998642      56789999999999999988


Q ss_pred             hHHHHhcCCCCCeEEEEcCCccccccc-ccCCccccc-cCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCe
Q 024553           85 LLPLLKNSPVPSRIVNVTSFTHRNVFN-AQVNNETIT-GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHV  162 (266)
Q Consensus        85 ~~~~l~~~~~~~~iv~vsS~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i  162 (266)
                      +..    .+ ..++|++||...+.... ..++.+... ...............|+.+|.+.+.+++.++.+.      ++
T Consensus       201 a~~----~~-~~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~------gi  269 (478)
T 4dqv_A          201 ALT----TK-LKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC------AL  269 (478)
T ss_dssp             HTS----SS-CCCEEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH------CC
T ss_pred             HHh----CC-CCeEEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh------CC
Confidence            743    33 46999999976543211 111111000 0000000001112459999999999999888764      67


Q ss_pred             EEEEecCCcccCCcc--C--cchhHHHHHHHHHHHHhh--------------------cCCCHHHHHHHHHHHhcCC---
Q 024553          163 SVIAADPGVVKTNIM--R--EVPSFLSLMAFTVLKLLG--------------------LLQSPEKGINSVLDAALAP---  215 (266)
Q Consensus       163 ~v~~v~PG~v~T~~~--~--~~~~~~~~~~~~~~~~~~--------------------~~~~p~~~a~~~~~~~~~~---  215 (266)
                      +++.+.||.|.++-.  .  +............ ...+                    .+...+++|++++.++...   
T Consensus       270 ~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~-~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~  348 (478)
T 4dqv_A          270 PVAVFRCGMILADTSYAGQLNMSDWVTRMVLSL-MATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGS  348 (478)
T ss_dssp             CEEEEEECEEECCSSSSSCCCTTBHHHHHHHHH-HHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-C
T ss_pred             CeEEEECceeeCCCccCCcCCHHHHHHHHHHHH-HHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccC
Confidence            899999999977532  1  1111111111111 1111                    1256889999999776542   


Q ss_pred             CCcccceeecCCCcc
Q 024553          216 PETSGVYFFGGKGRT  230 (266)
Q Consensus       216 ~~~~G~~~~~~~g~~  230 (266)
                      +...|..|+..+++.
T Consensus       349 ~~~~~~~ynv~~~~~  363 (478)
T 4dqv_A          349 SLAGFATYHVMNPHD  363 (478)
T ss_dssp             CCCSEEEEEESCCCC
T ss_pred             CCCCCceEEecCCCC
Confidence            334566666666554

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.20  E-value=2.1e-10  Score=97.54  Aligned_cols=133  Identities=14%  Similarity=0.004  Sum_probs=92.9

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .++.++.+|+++.+++.++++.           .++|+||||||.....  ...+..++.+++|+.++..+++.+..   
T Consensus        50 ~~~~~~~~Dl~~~~~~~~~~~~-----------~~~D~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~---  113 (338)
T 1udb_A           50 KHPTFVEGDIRNEALMTEILHD-----------HAIDTVIHFAGLKAVG--ESVQKPLEYYDNNVNGTLRLISAMRA---  113 (338)
T ss_dssp             SCCEEEECCTTCHHHHHHHHHH-----------TTCSEEEECCSCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHH---
T ss_pred             CcceEEEccCCCHHHHHHHhhc-----------cCCCEEEECCccCccc--cchhcHHHHHHHHHHHHHHHHHHHHh---
Confidence            3578899999999988877642           2589999999975311  12345678899999999999886533   


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCC-ChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCY-PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                       .+ .++||++||...+.....         ....+..+. +....|+.+|.+.+.+++.++.+.     .++.++.+.|
T Consensus       114 -~~-~~~iv~~SS~~~~g~~~~---------~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~~ilR~  177 (338)
T 1udb_A          114 -AN-VKNFIFSSSATVYGDNPK---------IPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQ-----PDWSIALLRY  177 (338)
T ss_dssp             -HT-CCEEEEEEEGGGGCSCCS---------SSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHS-----TTCEEEEEEE
T ss_pred             -cC-CCeEEEEccHHHhCCCCC---------CCcCcccCCCCCCChHHHHHHHHHHHHHHHHHhc-----CCCceEEEee
Confidence             23 469999999876432110         001111122 235689999999999999998874     4778888877


Q ss_pred             CcccCC
Q 024553          170 GVVKTN  175 (266)
Q Consensus       170 G~v~T~  175 (266)
                      +.+..+
T Consensus       178 ~~v~G~  183 (338)
T 1udb_A          178 FNPVGA  183 (338)
T ss_dssp             CEEECC
T ss_pred             ceecCC
Confidence            666543

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.19  E-value=2.1e-11  Score=102.82  Aligned_cols=182  Identities=10%  Similarity=-0.043  Sum_probs=88.8

Q ss_pred             EEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCC
Q 024553           15 AFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPV   94 (266)
Q Consensus        15 ~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~   94 (266)
                      ++.+|+++.+++.++++.+           ++|+|||+||....  ..+.+++++.+++|+.++..+++.+.+.      
T Consensus        41 ~~~~Dl~d~~~~~~~~~~~-----------~~d~vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~~------  101 (315)
T 2ydy_A           41 FEQVNLLDSNAVHHIIHDF-----------QPHVIVHCAAERRP--DVVENQPDAASQLNVDASGNLAKEAAAV------  101 (315)
T ss_dssp             -----------CHHHHHHH-----------CCSEEEECC---------------------CHHHHHHHHHHHHH------
T ss_pred             eEEecCCCHHHHHHHHHhh-----------CCCEEEECCcccCh--hhhhcCHHHHHHHHHHHHHHHHHHHHHc------
Confidence            5668999998887777543           58999999998542  2345678999999999999999998762      


Q ss_pred             CCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcccC
Q 024553           95 PSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKT  174 (266)
Q Consensus        95 ~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~T  174 (266)
                      ++++|++||...+......          ..+..+..+...|+.+|.+.+.+++.++.+     -..+++..|. |...+
T Consensus       102 ~~~~v~~SS~~v~~~~~~~----------~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~lR~~~v~-G~~~~  165 (315)
T 2ydy_A          102 GAFLIYISSDYVFDGTNPP----------YREEDIPAPLNLYGKTKLDGEKAVLENNLG-----AAVLRIPILY-GEVEK  165 (315)
T ss_dssp             TCEEEEEEEGGGSCSSSCS----------BCTTSCCCCCSHHHHHHHHHHHHHHHHCTT-----CEEEEECSEE-CSCSS
T ss_pred             CCeEEEEchHHHcCCCCCC----------CCCCCCCCCcCHHHHHHHHHHHHHHHhCCC-----eEEEeeeeee-CCCCc
Confidence            3499999998865431111          112223344578999999999999876432     1234444443 33332


Q ss_pred             CccCcchh-HHHHHH-HHH-----HHHhhcCCCHHHHHHHHHHHhcCC--CCcccceeecCCCcccc
Q 024553          175 NIMREVPS-FLSLMA-FTV-----LKLLGLLQSPEKGINSVLDAALAP--PETSGVYFFGGKGRTVN  232 (266)
Q Consensus       175 ~~~~~~~~-~~~~~~-~~~-----~~~~~~~~~p~~~a~~~~~~~~~~--~~~~G~~~~~~~g~~~~  232 (266)
                      +.. .+.. ...... ...     ......+..++++|++++.++...  ....|..|..++|+.+.
T Consensus       166 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~i~~~~~~s  231 (315)
T 2ydy_A          166 LEE-SAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHWSGNEQMT  231 (315)
T ss_dssp             GGG-STTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHHHHHHHHHTCTTCCEEEECCCSCCBC
T ss_pred             ccc-cHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHHHHHHhhccccCCCCeEEEcCCCccc
Confidence            100 1111 111100 000     001224568999999999766542  12345566656666654

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.19  E-value=1.1e-10  Score=94.59  Aligned_cols=160  Identities=8%  Similarity=-0.015  Sum_probs=95.6

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      ..+.++.+|+++.+++.++++             .+|+||||||..                    .....++.+++.++
T Consensus        67 ~~~~~~~~Dl~d~~~~~~~~~-------------~~D~vv~~a~~~--------------------~~~~~~~~~~~~~~  113 (236)
T 3qvo_A           67 TNSQIIMGDVLNHAALKQAMQ-------------GQDIVYANLTGE--------------------DLDIQANSVIAAMK  113 (236)
T ss_dssp             TTEEEEECCTTCHHHHHHHHT-------------TCSEEEEECCST--------------------THHHHHHHHHHHHH
T ss_pred             CCcEEEEecCCCHHHHHHHhc-------------CCCEEEEcCCCC--------------------chhHHHHHHHHHHH
Confidence            468999999999999887762             579999999862                    11134667888888


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                      +.+ .++||++||..++...+.......       +.........|..+|.           .+.   ..+++++.|.||
T Consensus       114 ~~~-~~~iV~iSS~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~-----------~l~---~~gi~~~~vrPg  171 (236)
T 3qvo_A          114 ACD-VKRLIFVLSLGIYDEVPGKFVEWN-------NAVIGEPLKPFRRAAD-----------AIE---ASGLEYTILRPA  171 (236)
T ss_dssp             HTT-CCEEEEECCCCC-----------------------CGGGHHHHHHHH-----------HHH---TSCSEEEEEEEC
T ss_pred             HcC-CCEEEEEecceecCCCCcccccch-------hhcccchHHHHHHHHH-----------HHH---HCCCCEEEEeCC
Confidence            876 789999999876542211110000       0001111223333221           122   579999999999


Q ss_pred             cccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcc
Q 024553          171 VVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRT  230 (266)
Q Consensus       171 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~  230 (266)
                      ++.++...........     ....+++.+|+|+|+.+++++..+....|+.|...++..
T Consensus       172 ~i~~~~~~~~~~~~~~-----~~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~~~  226 (236)
T 3qvo_A          172 WLTDEDIIDYELTSRN-----EPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPGT  226 (236)
T ss_dssp             EEECCSCCCCEEECTT-----SCCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEECSSC
T ss_pred             cccCCCCcceEEeccC-----CCCCCcEECHHHHHHHHHHHHcCcccccCeeEEecCCCC
Confidence            9988765432110000     001234569999999999887776644566665555443

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.19  E-value=9.7e-10  Score=93.42  Aligned_cols=180  Identities=11%  Similarity=-0.048  Sum_probs=110.6

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .++.++.+|+++.+++.++++.           .++|+||||||.....   +.++++  +++|+.++..+++.+.+   
T Consensus        66 ~~~~~~~~Dl~d~~~~~~~~~~-----------~~~D~vih~A~~~~~~---~~~~~~--~~~N~~~~~~l~~a~~~---  126 (333)
T 2q1w_A           66 PNLTFVEGSIADHALVNQLIGD-----------LQPDAVVHTAASYKDP---DDWYND--TLTNCVGGSNVVQAAKK---  126 (333)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHH-----------HCCSEEEECCCCCSCT---TCHHHH--HHHHTHHHHHHHHHHHH---
T ss_pred             CCceEEEEeCCCHHHHHHHHhc-----------cCCcEEEECceecCCC---ccCChH--HHHHHHHHHHHHHHHHH---
Confidence            3688999999999998887753           2589999999986432   333444  99999999999999866   


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHH-HHHhhCCCCCCCeEEEEecC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYE-LHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~-la~~~~~~~~~~i~v~~v~P  169 (266)
                       .+ .++||++||...+...+....     + ...+.. .+....|+.+|.+.+.+++. ++           .++.+.|
T Consensus       127 -~~-~~~iV~~SS~~~~g~~~~~~~-----~-~~~E~~-~p~~~~Y~~sK~~~E~~~~~s~~-----------~~~ilR~  186 (333)
T 2q1w_A          127 -NN-VGRFVYFQTALCYGVKPIQQP-----V-RLDHPR-NPANSSYAISKSANEDYLEYSGL-----------DFVTFRL  186 (333)
T ss_dssp             -TT-CSEEEEEEEGGGGCSCCCSSS-----B-CTTSCC-CCTTCHHHHHHHHHHHHHHHHTC-----------CEEEEEE
T ss_pred             -hC-CCEEEEECcHHHhCCCcccCC-----C-CcCCCC-CCCCCchHHHHHHHHHHHHhhhC-----------CeEEEee
Confidence             23 579999999776431000000     0 011111 22226799999999998865 43           3445666


Q ss_pred             CcccCCccC-cchhH-HHHHHHHH----HHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          170 GVVKTNIMR-EVPSF-LSLMAFTV----LKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       170 G~v~T~~~~-~~~~~-~~~~~~~~----~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      +.+..+... ...+. ........    ......+..++++|++++.++..+.   |..|..++|+.+.
T Consensus       187 ~~v~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~---g~~~~v~~~~~~s  252 (333)
T 2q1w_A          187 ANVVGPRNVSGPLPIFFQRLSEGKKCFVTKARRDFVFVKDLARATVRAVDGVG---HGAYHFSSGTDVA  252 (333)
T ss_dssp             SEEESTTCCSSHHHHHHHHHHTTCCCEEEECEECEEEHHHHHHHHHHHHTTCC---CEEEECSCSCCEE
T ss_pred             ceEECcCCcCcHHHHHHHHHHcCCeeeCCCceEeeEEHHHHHHHHHHHHhcCC---CCEEEeCCCCCcc
Confidence            666554411 11111 00000000    0011235689999999997665443   6667766666554

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.18  E-value=1.4e-10  Score=91.37  Aligned_cols=158  Identities=12%  Similarity=-0.039  Sum_probs=104.8

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .++.++.+|+++.+++.+++             ..+|+||||||....      +++   .++|+.++..+++.+...  
T Consensus        46 ~~~~~~~~D~~~~~~~~~~~-------------~~~d~vi~~a~~~~~------~~~---~~~n~~~~~~~~~~~~~~--  101 (206)
T 1hdo_A           46 RPAHVVVGDVLQAADVDKTV-------------AGQDAVIVLLGTRND------LSP---TTVMSEGARNIVAAMKAH--  101 (206)
T ss_dssp             CCSEEEESCTTSHHHHHHHH-------------TTCSEEEECCCCTTC------CSC---CCHHHHHHHHHHHHHHHH--
T ss_pred             CceEEEEecCCCHHHHHHHH-------------cCCCEEEECccCCCC------CCc---cchHHHHHHHHHHHHHHh--
Confidence            46889999999998887765             247999999997543      111   248888888887777542  


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                        + .+++|++||...+...                .........|+.+|.+++.+++          ..+++++.+.||
T Consensus       102 --~-~~~~v~~Ss~~~~~~~----------------~~~~~~~~~y~~~K~~~e~~~~----------~~~i~~~~lrp~  152 (206)
T 1hdo_A          102 --G-VDKVVACTSAFLLWDP----------------TKVPPRLQAVTDDHIRMHKVLR----------ESGLKYVAVMPP  152 (206)
T ss_dssp             --T-CCEEEEECCGGGTSCT----------------TCSCGGGHHHHHHHHHHHHHHH----------HTCSEEEEECCS
T ss_pred             --C-CCeEEEEeeeeeccCc----------------ccccccchhHHHHHHHHHHHHH----------hCCCCEEEEeCC
Confidence              2 5699999998753210                0001156789999999998873          257899999999


Q ss_pred             cc-cCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCC
Q 024553          171 VV-KTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKG  228 (266)
Q Consensus       171 ~v-~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g  228 (266)
                      ++ .++....+.....      ..+.+.+.+++++|+.+++++..+ ...|+.|..++|
T Consensus       153 ~~~~~~~~~~~~~~~~------~~~~~~~i~~~Dva~~~~~~~~~~-~~~g~~~~i~~g  204 (206)
T 1hdo_A          153 HIGDQPLTGAYTVTLD------GRGPSRVISKHDLGHFMLRCLTTD-EYDGHSTYPSHQ  204 (206)
T ss_dssp             EEECCCCCSCCEEESS------SCSSCSEEEHHHHHHHHHHTTSCS-TTTTCEEEEECC
T ss_pred             cccCCCCCcceEeccc------CCCCCCccCHHHHHHHHHHHhcCc-cccccceeeecc
Confidence            98 4443322211000      000024568999999999765544 456776665554

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.18  E-value=6.5e-10  Score=94.65  Aligned_cols=192  Identities=9%  Similarity=0.041  Sum_probs=119.4

Q ss_pred             ccEEEEEecCCCH-HHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           11 ARLEAFQVDLSSF-QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        11 ~~~~~i~~Dls~~-~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      .++.++.+|+++. +.+.++++             .+|+|||+||...+.  ...+++++.+++|+.++..+++.+..  
T Consensus        45 ~~~~~~~~D~~~~~~~~~~~~~-------------~~d~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~--  107 (345)
T 2bll_A           45 PHFHFVEGDISIHSEWIEYHVK-------------KCDVVLPLVAIATPI--EYTRNPLRVFELDFEENLRIIRYCVK--  107 (345)
T ss_dssp             TTEEEEECCTTTCSHHHHHHHH-------------HCSEEEECBCCCCHH--HHHHSHHHHHHHHTHHHHHHHHHHHH--
T ss_pred             CCeEEEeccccCcHHHHHhhcc-------------CCCEEEEcccccCcc--chhcCHHHHHHHHHHHHHHHHHHHHH--
Confidence            4688999999984 45555442             479999999985421  11345778999999999998888754  


Q ss_pred             hcCCCCCeEEEEcCCccccccccc-CCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQ-VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                        .  ++++|++||...+...... ++.++...   .......+...|+.+|.+.+.+++.++++.      +++++.+.
T Consensus       108 --~--~~~~v~~SS~~v~g~~~~~~~~e~~~~~---~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------~~~~~ilr  174 (345)
T 2bll_A          108 --Y--RKRIIFPSTSEVYGMCSDKYFDEDHSNL---IVGPVNKPRWIYSVSKQLLDRVIWAYGEKE------GLQFTLFR  174 (345)
T ss_dssp             --T--TCEEEEECCGGGGBTCCCSSBCTTTCCC---BCCCTTCGGGHHHHHHHHHHHHHHHHHHHH------CCCEEEEE
T ss_pred             --h--CCeEEEEecHHHcCCCCCCCcCCccccc---ccCcccCcccccHHHHHHHHHHHHHHHHhc------CCCEEEEc
Confidence              2  2699999998765432111 11110000   000011234579999999999999988764      68899999


Q ss_pred             CCcccCCccCcc-------hhHH-HHHHHHHHH-H---hh------cCCCHHHHHHHHHHHhcCCCC-cccceeecCCCc
Q 024553          169 PGVVKTNIMREV-------PSFL-SLMAFTVLK-L---LG------LLQSPEKGINSVLDAALAPPE-TSGVYFFGGKGR  229 (266)
Q Consensus       169 PG~v~T~~~~~~-------~~~~-~~~~~~~~~-~---~~------~~~~p~~~a~~~~~~~~~~~~-~~G~~~~~~~g~  229 (266)
                      ||.+.++.....       .... .+....... +   .+      .+..++++|++++.++..+.. ..|..|..++++
T Consensus       175 p~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~  254 (345)
T 2bll_A          175 PFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPE  254 (345)
T ss_dssp             ECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTT
T ss_pred             CCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHHHhhccccCCCceEEeCCCC
Confidence            999988764321       0111 111111100 1   11      255899999999976654431 456666666654


Q ss_pred             -ccc
Q 024553          230 -TVN  232 (266)
Q Consensus       230 -~~~  232 (266)
                       .+.
T Consensus       255 ~~~s  258 (345)
T 2bll_A          255 NEAS  258 (345)
T ss_dssp             SEEE
T ss_pred             CCCC
Confidence             454

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.16  E-value=1.2e-10  Score=97.87  Aligned_cols=181  Identities=12%  Similarity=0.002  Sum_probs=117.2

Q ss_pred             EEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcC
Q 024553           13 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS   92 (266)
Q Consensus        13 ~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~   92 (266)
                      +.++.+|+++.+++.+++++.           ++|+|||+||.....   ..++.++.+++|+.++..+++.+.+    .
T Consensus        47 ~~~~~~D~~d~~~~~~~~~~~-----------~~d~vih~a~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~----~  108 (312)
T 2yy7_A           47 GPFEVVNALDFNQIEHLVEVH-----------KITDIYLMAALLSAT---AEKNPAFAWDLNMNSLFHVLNLAKA----K  108 (312)
T ss_dssp             SCEEECCTTCHHHHHHHHHHT-----------TCCEEEECCCCCHHH---HHHCHHHHHHHHHHHHHHHHHHHHT----T
T ss_pred             CceEEecCCCHHHHHHHHhhc-----------CCCEEEECCccCCCc---hhhChHHHHHHHHHHHHHHHHHHHH----c
Confidence            568899999999888776432           589999999975321   2356788999999999999988854    2


Q ss_pred             CCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcc
Q 024553           93 PVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVV  172 (266)
Q Consensus        93 ~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v  172 (266)
                      + .+++|++||...+......        ....+..+..+...|+.+|.+.+.+++.++.++      +++++.+.||.+
T Consensus       109 ~-~~~~v~~SS~~~~~~~~~~--------~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------~~~~~~lrp~~v  173 (312)
T 2yy7_A          109 K-IKKIFWPSSIAVFGPTTPK--------ENTPQYTIMEPSTVYGISKQAGERWCEYYHNIY------GVDVRSIRYPGL  173 (312)
T ss_dssp             S-CSEEECCEEGGGCCTTSCS--------SSBCSSCBCCCCSHHHHHHHHHHHHHHHHHHHH------CCEEECEEECEE
T ss_pred             C-CCEEEEeccHHHhCCCCCC--------CCccccCcCCCCchhHHHHHHHHHHHHHHHHhc------CCcEEEEeCCeE
Confidence            3 4699999998765432110        001112223345679999999999999888764      689999999999


Q ss_pred             cCCccCcc----hhHHHHHHHHHH-HH---h------hcCCCHHHHHHHHHHHhcCCCCc--ccceeecC
Q 024553          173 KTNIMREV----PSFLSLMAFTVL-KL---L------GLLQSPEKGINSVLDAALAPPET--SGVYFFGG  226 (266)
Q Consensus       173 ~T~~~~~~----~~~~~~~~~~~~-~~---~------~~~~~p~~~a~~~~~~~~~~~~~--~G~~~~~~  226 (266)
                      .++.....    ............ ..   +      ..+..++++|++++.++..+...  .|..|+.+
T Consensus       174 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~  243 (312)
T 2yy7_A          174 ISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPVEKIKIHSSYNLA  243 (312)
T ss_dssp             ECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCGGGCCCSSCEECC
T ss_pred             ecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHHhCcccccccCceEEeC
Confidence            87543211    011111111110 00   0      11346899999999776655432  23455544

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.12  E-value=1.8e-10  Score=98.03  Aligned_cols=184  Identities=17%  Similarity=0.164  Sum_probs=108.8

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      ++.++.+|+++.+++.+++             ..+|+|||+||.... .  ..+..++.+++|+.|+..+++++.+..  
T Consensus        60 ~~~~~~~Dl~d~~~~~~~~-------------~~~D~Vih~A~~~~~-~--~~~~~~~~~~~nv~gt~~ll~aa~~~~--  121 (338)
T 2rh8_A           60 DLKIFRADLTDELSFEAPI-------------AGCDFVFHVATPVHF-A--SEDPENDMIKPAIQGVVNVMKACTRAK--  121 (338)
T ss_dssp             CEEEEECCTTTSSSSHHHH-------------TTCSEEEEESSCCCC------------CHHHHHHHHHHHHHHHHCT--
T ss_pred             cEEEEecCCCChHHHHHHH-------------cCCCEEEEeCCccCC-C--CCCcHHHHHHHHHHHHHHHHHHHHHcC--
Confidence            5889999999988877655             247999999996521 1  112234589999999999999886542  


Q ss_pred             CCCCCeEEEEcCCcccccccc-----cCCccccccCcccCCCCC-ChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEE
Q 024553           92 SPVPSRIVNVTSFTHRNVFNA-----QVNNETITGKFFLRSKCY-PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVI  165 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~  165 (266)
                       + .++||++||.++....+.     .++.+.......  ..+. +....|+.+|.+.+.+++.++++      .+++++
T Consensus       122 -~-v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~--~~~~~~~~~~Y~~sK~~~E~~~~~~~~~------~gi~~~  191 (338)
T 2rh8_A          122 -S-VKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEF--LTSAKPPTWGYPASKTLAEKAAWKFAEE------NNIDLI  191 (338)
T ss_dssp             -T-CCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC---------CCCCCCTTSCCHHHHHHHHHHHH------HTCCEE
T ss_pred             -C-cCEEEEEecHHHeecCCcCCCCcccChhhccchhh--ccccCCccchHHHHHHHHHHHHHHHHHH------cCCcEE
Confidence             1 469999999764221110     111111000000  0000 01125999999999988877655      378999


Q ss_pred             EecCCcccCCccCcc-hhHHHHH---------HHHHHH----Hhh--cCCCHHHHHHHHHHHhcCCCCcccceee
Q 024553          166 AADPGVVKTNIMREV-PSFLSLM---------AFTVLK----LLG--LLQSPEKGINSVLDAALAPPETSGVYFF  224 (266)
Q Consensus       166 ~v~PG~v~T~~~~~~-~~~~~~~---------~~~~~~----~~~--~~~~p~~~a~~~~~~~~~~~~~~G~~~~  224 (266)
                      .+.||.|.++..... +......         ......    ..+  .+..++|+|++++.++.. +...|.|..
T Consensus       192 ~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~-~~~~~~~~~  265 (338)
T 2rh8_A          192 TVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHVEDVCRAHIFVAEK-ESASGRYIC  265 (338)
T ss_dssp             EEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHSSEEEEEHHHHHHHHHHHHHC-TTCCEEEEE
T ss_pred             EEeCCceECCCCCCCCCchHHHHHHHHcCCccccccccccccccCcccEEEHHHHHHHHHHHHcC-CCcCCcEEE
Confidence            999999999875432 2111100         000000    001  367999999999976543 344566644

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.10  E-value=1.7e-09  Score=91.19  Aligned_cols=187  Identities=10%  Similarity=0.012  Sum_probs=117.3

Q ss_pred             ecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCCCCe
Q 024553           18 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSR   97 (266)
Q Consensus        18 ~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~   97 (266)
                      +|+++.+++.++++++           ++|+|||+||.... .....++.++.+++|+.++..+++.+..    .+ .++
T Consensus        39 ~D~~d~~~~~~~~~~~-----------~~d~vih~a~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~  101 (321)
T 1e6u_A           39 LNLLDSRAVHDFFASE-----------RIDQVYLAAAKVGG-IVANNTYPADFIYQNMMIESNIIHAAHQ----ND-VNK  101 (321)
T ss_dssp             CCTTCHHHHHHHHHHH-----------CCSEEEECCCCCCC-HHHHHHCHHHHHHHHHHHHHHHHHHHHH----TT-CCE
T ss_pred             CCccCHHHHHHHHHhc-----------CCCEEEEcCeecCC-cchhhhCHHHHHHHHHHHHHHHHHHHHH----hC-CCe
Confidence            7999998888777543           58999999997532 1122345678999999999999988854    23 469


Q ss_pred             EEEEcCCccccccc-ccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcccCCc
Q 024553           98 IVNVTSFTHRNVFN-AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI  176 (266)
Q Consensus        98 iv~vsS~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~T~~  176 (266)
                      +|++||...+.... ..++.++..     .....+....|+.+|.+.+.+++.++.+.      +++++.+.||++.++.
T Consensus       102 ~v~~SS~~vyg~~~~~~~~E~~~~-----~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~------~~~~~ilrp~~v~G~~  170 (321)
T 1e6u_A          102 LLFLGSSCIYPKLAKQPMAESELL-----QGTLEPTNEPYAIAKIAGIKLCESYNRQY------GRDYRSVMPTNLYGPH  170 (321)
T ss_dssp             EEEECCGGGSCTTCCSSBCGGGTT-----SSCCCGGGHHHHHHHHHHHHHHHHHHHHH------CCEEEEEEECEEESTT
T ss_pred             EEEEccHHHcCCCCCCCcCccccc-----cCCCCCCCCccHHHHHHHHHHHHHHHHHh------CCCEEEEEeCCcCCcC
Confidence            99999987654211 111111100     00122223589999999999999888764      7899999999998876


Q ss_pred             cCcch---hHHHHHHHHHH-------HHh---h------cCCCHHHHHHHHHHHhcCCCCc-------ccceeecCCCcc
Q 024553          177 MREVP---SFLSLMAFTVL-------KLL---G------LLQSPEKGINSVLDAALAPPET-------SGVYFFGGKGRT  230 (266)
Q Consensus       177 ~~~~~---~~~~~~~~~~~-------~~~---~------~~~~p~~~a~~~~~~~~~~~~~-------~G~~~~~~~g~~  230 (266)
                      .....   ...........       .++   +      .+...+++|++++.++..+...       .|..|+.++++.
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~  250 (321)
T 1e6u_A          171 DNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVD  250 (321)
T ss_dssp             CCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCC
T ss_pred             CCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCC
Confidence            54210   11111111111       011   1      2347999999999776554321       244555556665


Q ss_pred             cc
Q 024553          231 VN  232 (266)
Q Consensus       231 ~~  232 (266)
                      +.
T Consensus       251 ~s  252 (321)
T 1e6u_A          251 CT  252 (321)
T ss_dssp             EE
T ss_pred             cc
Confidence            54

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.10  E-value=6.2e-10  Score=91.70  Aligned_cols=168  Identities=14%  Similarity=0.060  Sum_probs=106.1

Q ss_pred             EEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCCC
Q 024553           16 FQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVP   95 (266)
Q Consensus        16 i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~   95 (266)
                      +.+|+++.+++.++++.+           ++|+||||||....  ..+.+++++.+++|+.++..+++.+.+    .  +
T Consensus        39 ~~~Dl~~~~~~~~~~~~~-----------~~d~vi~~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~----~--~   99 (273)
T 2ggs_A           39 YKLDLTDFPRLEDFIIKK-----------RPDVIINAAAMTDV--DKCEIEKEKAYKINAEAVRHIVRAGKV----I--D   99 (273)
T ss_dssp             EECCTTSHHHHHHHHHHH-----------CCSEEEECCCCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHH----T--T
T ss_pred             ceeccCCHHHHHHHHHhc-----------CCCEEEECCcccCh--hhhhhCHHHHHHHhHHHHHHHHHHHHH----h--C
Confidence            679999999998887644           48999999998542  223467889999999999999999854    2  3


Q ss_pred             CeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcccCC
Q 024553           96 SRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN  175 (266)
Q Consensus        96 ~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~T~  175 (266)
                      ++||++||..++......+          .+..+..+...|+.+|.+.+.+++.    +.   ...++++.+. |  .++
T Consensus       100 ~~iv~~SS~~~~~~~~~~~----------~e~~~~~~~~~Y~~sK~~~e~~~~~----~~---~~~iR~~~v~-G--~~~  159 (273)
T 2ggs_A          100 SYIVHISTDYVFDGEKGNY----------KEEDIPNPINYYGLSKLLGETFALQ----DD---SLIIRTSGIF-R--NKG  159 (273)
T ss_dssp             CEEEEEEEGGGSCSSSCSB----------CTTSCCCCSSHHHHHHHHHHHHHCC----TT---CEEEEECCCB-S--SSS
T ss_pred             CeEEEEecceeEcCCCCCc----------CCCCCCCCCCHHHHHHHHHHHHHhC----CC---eEEEeccccc-c--ccH
Confidence            5999999988754322111          1122233456899999999998865    22   2344444444 3  121


Q ss_pred             ccCcchhHHHHHHHHHH-HH------hhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          176 IMREVPSFLSLMAFTVL-KL------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       176 ~~~~~~~~~~~~~~~~~-~~------~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      +    ...  ....... .+      ...+.+++++|++++.++..+  .+| .|..++ +.+.
T Consensus       160 ~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~~--~~g-~~~i~~-~~~s  213 (273)
T 2ggs_A          160 F----PIY--VYKTLKEGKTVFAFKGYYSPISARKLASAILELLELR--KTG-IIHVAG-ERIS  213 (273)
T ss_dssp             H----HHH--HHHHHHTTCCEEEESCEECCCBHHHHHHHHHHHHHHT--CCE-EEECCC-CCEE
T ss_pred             H----HHH--HHHHHHcCCCEEeecCCCCceEHHHHHHHHHHHHhcC--cCC-eEEECC-Cccc
Confidence            1    111  0000000 00      234678999999999776543  256 445444 5443

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.10  E-value=8.4e-10  Score=91.91  Aligned_cols=172  Identities=16%  Similarity=0.048  Sum_probs=111.0

Q ss_pred             EecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCCCC
Q 024553           17 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPS   96 (266)
Q Consensus        17 ~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~   96 (266)
                      .+|+++.+++.++++++           ++|+|||+||....  ..+.+++++.+++|+.++..+++.+.+.    +  .
T Consensus        46 ~~Dl~d~~~~~~~~~~~-----------~~d~vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~l~~a~~~~----~--~  106 (292)
T 1vl0_A           46 DLDITNVLAVNKFFNEK-----------KPNVVINCAAHTAV--DKCEEQYDLAYKINAIGPKNLAAAAYSV----G--A  106 (292)
T ss_dssp             TCCTTCHHHHHHHHHHH-----------CCSEEEECCCCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHH----T--C
T ss_pred             cCCCCCHHHHHHHHHhc-----------CCCEEEECCccCCH--HHHhcCHHHHHHHHHHHHHHHHHHHHHc----C--C
Confidence            47999999888777543           58999999997532  2234678899999999999999998652    2  3


Q ss_pred             eEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcccCCc
Q 024553           97 RIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI  176 (266)
Q Consensus        97 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~T~~  176 (266)
                      +||++||...+.....         ....+..+..+...|+.+|.+.+.+++.++.          .++.+.|+.+.++ 
T Consensus       107 ~iv~~SS~~v~~~~~~---------~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~----------~~~~lR~~~v~G~-  166 (292)
T 1vl0_A          107 EIVQISTDYVFDGEAK---------EPITEFDEVNPQSAYGKTKLEGENFVKALNP----------KYYIVRTAWLYGD-  166 (292)
T ss_dssp             EEEEEEEGGGSCSCCS---------SCBCTTSCCCCCSHHHHHHHHHHHHHHHHCS----------SEEEEEECSEESS-
T ss_pred             eEEEechHHeECCCCC---------CCCCCCCCCCCccHHHHHHHHHHHHHHhhCC----------CeEEEeeeeeeCC-
Confidence            9999999876542211         0111122333456899999999998876431          2567788888766 


Q ss_pred             cCcchhHHHHHHHHHH-HH-------hhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          177 MREVPSFLSLMAFTVL-KL-------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       177 ~~~~~~~~~~~~~~~~-~~-------~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      ..+....  ....... .+       ...+..++++|++++.++..+   .|..|..++++.+.
T Consensus       167 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~---~~~~~~i~~~~~~s  225 (292)
T 1vl0_A          167 GNNFVKT--MINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEK---NYGTFHCTCKGICS  225 (292)
T ss_dssp             SSCHHHH--HHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHT---CCEEEECCCBSCEE
T ss_pred             CcChHHH--HHHHHhcCCcEEeecCeeeCCccHHHHHHHHHHHHhcC---CCcEEEecCCCCcc
Confidence            2222111  1110000 01       123457999999999766553   45666666666554

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.09  E-value=1.3e-09  Score=91.86  Aligned_cols=130  Identities=10%  Similarity=0.068  Sum_probs=92.8

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      .+.++.+|+++.+++.+++++           .++|+|||+||....   ...+++++.+++|+.++..+++.+.+    
T Consensus        40 ~~~~~~~D~~d~~~~~~~~~~-----------~~~d~vih~a~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~~----  101 (317)
T 3ajr_A           40 GIKFITLDVSNRDEIDRAVEK-----------YSIDAIFHLAGILSA---KGEKDPALAYKVNMNGTYNILEAAKQ----  101 (317)
T ss_dssp             TCCEEECCTTCHHHHHHHHHH-----------TTCCEEEECCCCCHH---HHHHCHHHHHHHHHHHHHHHHHHHHH----
T ss_pred             CceEEEecCCCHHHHHHHHhh-----------cCCcEEEECCcccCC---ccccChHHHhhhhhHHHHHHHHHHHH----
Confidence            356889999999998877642           268999999998532   12356788999999999999998754    


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCc
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV  171 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~  171 (266)
                      .+ .+++|++||...+......        ....+..+..+...|+.+|.+.+.+++.++.+.      +++++.+.|+.
T Consensus       102 ~~-~~~~v~~SS~~~~~~~~~~--------~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~------~~~~~~lR~~~  166 (317)
T 3ajr_A          102 HR-VEKVVIPSTIGVFGPETPK--------NKVPSITITRPRTMFGVTKIAAELLGQYYYEKF------GLDVRSLRYPG  166 (317)
T ss_dssp             TT-CCEEEEEEEGGGCCTTSCS--------SSBCSSSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCEEEEEEECE
T ss_pred             cC-CCEEEEecCHHHhCCCCCC--------CCccccccCCCCchHHHHHHHHHHHHHHHHHhc------CCeEEEEecCc
Confidence            23 4699999998865432110        001112233346789999999999999887664      67888887655


Q ss_pred             ccC
Q 024553          172 VKT  174 (266)
Q Consensus       172 v~T  174 (266)
                      +..
T Consensus       167 ~~g  169 (317)
T 3ajr_A          167 IIS  169 (317)
T ss_dssp             EEC
T ss_pred             Eec
Confidence            543

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.08  E-value=1.5e-09  Score=90.05  Aligned_cols=173  Identities=12%  Similarity=0.028  Sum_probs=113.3

Q ss_pred             EecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCCCC
Q 024553           17 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPS   96 (266)
Q Consensus        17 ~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~   96 (266)
                      .+|+++.+++.++++++           ++|+|||+||....  ....+++++.+++|+.++..+++.+...      +.
T Consensus        39 ~~D~~d~~~~~~~~~~~-----------~~d~vi~~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~   99 (287)
T 3sc6_A           39 LLDITNISQVQQVVQEI-----------RPHIIIHCAAYTKV--DQAEKERDLAYVINAIGARNVAVASQLV------GA   99 (287)
T ss_dssp             TSCTTCHHHHHHHHHHH-----------CCSEEEECCCCCCH--HHHTTCHHHHHHHHTHHHHHHHHHHHHH------TC
T ss_pred             ccCCCCHHHHHHHHHhc-----------CCCEEEECCcccCh--HHHhcCHHHHHHHHHHHHHHHHHHHHHc------CC
Confidence            47999999988877644           58999999998642  2234678899999999999999988543      24


Q ss_pred             eEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcccCCc
Q 024553           97 RIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI  176 (266)
Q Consensus        97 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~T~~  176 (266)
                      ++|++||...+.....         ....+..+..+...|+.+|.+.+.+++.++.          .++.+.|+.+.++.
T Consensus       100 ~~v~~SS~~vy~~~~~---------~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~----------~~~ilR~~~v~G~~  160 (287)
T 3sc6_A          100 KLVYISTDYVFQGDRP---------EGYDEFHNPAPINIYGASKYAGEQFVKELHN----------KYFIVRTSWLYGKY  160 (287)
T ss_dssp             EEEEEEEGGGSCCCCS---------SCBCTTSCCCCCSHHHHHHHHHHHHHHHHCS----------SEEEEEECSEECSS
T ss_pred             eEEEEchhhhcCCCCC---------CCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC----------CcEEEeeeeecCCC
Confidence            8999999876542211         1122233444567899999999998865422          34778899998765


Q ss_pred             cCcchhHHHHHHHHH-HHHh-------hcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          177 MREVPSFLSLMAFTV-LKLL-------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       177 ~~~~~~~~~~~~~~~-~~~~-------~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      ........  ..... ..++       ..+..++++|++++.++..+.  +| .|+.++++.+.
T Consensus       161 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~--~~-~~~i~~~~~~s  219 (287)
T 3sc6_A          161 GNNFVKTM--IRLGKEREEISVVADQIGSPTYVADLNVMINKLIHTSL--YG-TYHVSNTGSCS  219 (287)
T ss_dssp             SCCHHHHH--HHHHTTCSEEEEECSCEECCEEHHHHHHHHHHHHTSCC--CE-EEECCCBSCEE
T ss_pred             CCcHHHHH--HHHHHcCCCeEeecCcccCceEHHHHHHHHHHHHhCCC--CC-eEEEcCCCccc
Confidence            44322111  10000 0001       123459999999997666544  45 55556666554

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.06  E-value=4.9e-09  Score=90.33  Aligned_cols=192  Identities=8%  Similarity=0.075  Sum_probs=121.5

Q ss_pred             ccEEEEEecCC-CHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           11 ARLEAFQVDLS-SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        11 ~~~~~i~~Dls-~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      .++.++.+|++ +.+.+.++++             .+|+|||+||...+.  ...++.++.+++|+.++..+++.+... 
T Consensus        69 ~~v~~~~~Dl~~d~~~~~~~~~-------------~~d~Vih~A~~~~~~--~~~~~~~~~~~~nv~~~~~ll~a~~~~-  132 (372)
T 3slg_A           69 ERMHFFEGDITINKEWVEYHVK-------------KCDVILPLVAIATPA--TYVKQPLRVFELDFEANLPIVRSAVKY-  132 (372)
T ss_dssp             TTEEEEECCTTTCHHHHHHHHH-------------HCSEEEECBCCCCHH--HHHHCHHHHHHHHTTTTHHHHHHHHHH-
T ss_pred             CCeEEEeCccCCCHHHHHHHhc-------------cCCEEEEcCccccHH--HHhhCHHHHHHHHHHHHHHHHHHHHHh-
Confidence            47899999999 8888877663             479999999986421  123456788999999999998888543 


Q ss_pred             hcCCCCCeEEEEcCCcccccccc-cCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNA-QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                         +  .++|++||...+..... .+..++..   ........+...|+.+|.+.+.+++.++.      . ++.++.+.
T Consensus       133 ---~--~~~v~~SS~~vyg~~~~~~~~e~~~~---~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~------~-g~~~~ilR  197 (372)
T 3slg_A          133 ---G--KHLVFPSTSEVYGMCADEQFDPDASA---LTYGPINKPRWIYACSKQLMDRVIWGYGM------E-GLNFTLFR  197 (372)
T ss_dssp             ---T--CEEEEECCGGGGBSCCCSSBCTTTCC---EEECCTTCTTHHHHHHHHHHHHHHHHHHT------T-TCEEEEEE
T ss_pred             ---C--CcEEEeCcHHHhCCCCCCCCCccccc---cccCCCCCCCCcHHHHHHHHHHHHHHHHH------C-CCCEEEEc
Confidence               2  59999999776543211 11111000   00000113445799999999999877653      3 78999999


Q ss_pred             CCcccCCccCcc-------hhHHHHHHHHHHH--H---hh------cCCCHHHHHHHHHHHhcCCCC-cccceeecCC-C
Q 024553          169 PGVVKTNIMREV-------PSFLSLMAFTVLK--L---LG------LLQSPEKGINSVLDAALAPPE-TSGVYFFGGK-G  228 (266)
Q Consensus       169 PG~v~T~~~~~~-------~~~~~~~~~~~~~--~---~~------~~~~p~~~a~~~~~~~~~~~~-~~G~~~~~~~-g  228 (266)
                      |+.+.++.....       .............  +   .+      .+..++++|++++.++..+.. ..|..|+.++ +
T Consensus       198 p~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~  277 (372)
T 3slg_A          198 PFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPN  277 (372)
T ss_dssp             ECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTT
T ss_pred             cccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCCCC
Confidence            999988764421       1111111111111  0   01      245789999999977665432 4566666666 4


Q ss_pred             ccccC
Q 024553          229 RTVNS  233 (266)
Q Consensus       229 ~~~~~  233 (266)
                      +.+.+
T Consensus       278 ~~~s~  282 (372)
T 3slg_A          278 NNFSV  282 (372)
T ss_dssp             CEEEH
T ss_pred             CCccH
Confidence            56654

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.06  E-value=2e-09  Score=85.67  Aligned_cols=170  Identities=15%  Similarity=0.087  Sum_probs=94.7

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      ..+.++.+|+++.++     +.+          ..+|+||||||....           ...+|+.++    +.+++.++
T Consensus        42 ~~~~~~~~D~~d~~~-----~~~----------~~~d~vi~~ag~~~~-----------~~~~~~~~~----~~l~~a~~   91 (221)
T 3ew7_A           42 KDINILQKDIFDLTL-----SDL----------SDQNVVVDAYGISPD-----------EAEKHVTSL----DHLISVLN   91 (221)
T ss_dssp             SSSEEEECCGGGCCH-----HHH----------TTCSEEEECCCSSTT-----------TTTSHHHHH----HHHHHHHC
T ss_pred             CCCeEEeccccChhh-----hhh----------cCCCEEEECCcCCcc-----------ccchHHHHH----HHHHHHHH
Confidence            357899999999887     211          368999999998421           234455554    55555566


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                      +.+ .+++|++||..+....+... .       ..+..+..+...|+.+|.+.+.+. .+..+     ..+++++.+.||
T Consensus        92 ~~~-~~~~v~~SS~~~~~~~~~~~-~-------~~~~~~~~~~~~y~~~k~~~e~~~-~~~~~-----~~gi~~~ivrp~  156 (221)
T 3ew7_A           92 GTV-SPRLLVVGGAASLQIDEDGN-T-------LLESKGLREAPYYPTARAQAKQLE-HLKSH-----QAEFSWTYISPS  156 (221)
T ss_dssp             SCC-SSEEEEECCCC---------------------------CCCSCCHHHHHHHHH-HHHTT-----TTTSCEEEEECS
T ss_pred             hcC-CceEEEEecceEEEcCCCCc-c-------ccccCCCCCHHHHHHHHHHHHHHH-HHHhh-----ccCccEEEEeCc
Confidence            665 68999999987643221100 0       000112223456999999998873 33331     468999999999


Q ss_pred             cccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecC
Q 024553          171 VVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGG  226 (266)
Q Consensus       171 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~  226 (266)
                      ++.++......................+.+++++|++++.++..++ ..|+.|...
T Consensus       157 ~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-~~g~~~~~~  211 (221)
T 3ew7_A          157 AMFEPGERTGDYQIGKDHLLFGSDGNSFISMEDYAIAVLDEIERPN-HLNEHFTVA  211 (221)
T ss_dssp             SCCCCC---------------------CCCHHHHHHHHHHHHHSCS-CTTSEEECC
T ss_pred             ceecCCCccCceEeccccceecCCCCceEeHHHHHHHHHHHHhCcc-ccCCEEEEC
Confidence            9988721110000000000000111235699999999998776654 556666644

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.01  E-value=5.5e-09  Score=96.92  Aligned_cols=193  Identities=9%  Similarity=0.041  Sum_probs=120.6

Q ss_pred             ccEEEEEecCCCHHH-HHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           11 ARLEAFQVDLSSFQS-VLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~-v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      .++.++.+|+++.++ +.++++             ++|+|||+||...+.  ...++.++.+++|+.++..+++.+... 
T Consensus       360 ~~v~~v~~Dl~d~~~~~~~~~~-------------~~D~Vih~Aa~~~~~--~~~~~~~~~~~~Nv~gt~~ll~aa~~~-  423 (660)
T 1z7e_A          360 PHFHFVEGDISIHSEWIEYHVK-------------KCDVVLPLVAIATPI--EYTRNPLRVFELDFEENLRIIRYCVKY-  423 (660)
T ss_dssp             TTEEEEECCTTTCHHHHHHHHH-------------HCSEEEECCCCCCTH--HHHHSHHHHHHHHTHHHHHHHHHHHHT-
T ss_pred             CceEEEECCCCCcHHHHHHhhc-------------CCCEEEECceecCcc--ccccCHHHHHHhhhHHHHHHHHHHHHh-
Confidence            468899999999765 444432             479999999986431  123456889999999999998888542 


Q ss_pred             hcCCCCCeEEEEcCCccccccccc-CCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQ-VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                           ++++|++||...+...... ++.++...   .......+...|+.+|.+.+.+++.++++.      +++++.+.
T Consensus       424 -----~~r~V~~SS~~vyg~~~~~~~~E~~~~~---~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~------gi~~~ilR  489 (660)
T 1z7e_A          424 -----RKRIIFPSTSEVYGMCSDKYFDEDHSNL---IVGPVNKPRWIYSVSKQLLDRVIWAYGEKE------GLQFTLFR  489 (660)
T ss_dssp             -----TCEEEEECCGGGGBTCCSSSBCTTTCCE---EECCTTCTTHHHHHHHHHHHHHHHHHHHHH------CCCEEEEE
T ss_pred             -----CCEEEEEecHHHcCCCCCcccCCCcccc---ccCcccCCCCCcHHHHHHHHHHHHHHHHHc------CCCEEEEC
Confidence                 2699999998765432111 11110000   000011234579999999999999988764      68899999


Q ss_pred             CCcccCCccCcch-------hHH-HHHHHHHH-HHh---------hcCCCHHHHHHHHHHHhcCCC-CcccceeecCCCc
Q 024553          169 PGVVKTNIMREVP-------SFL-SLMAFTVL-KLL---------GLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGR  229 (266)
Q Consensus       169 PG~v~T~~~~~~~-------~~~-~~~~~~~~-~~~---------~~~~~p~~~a~~~~~~~~~~~-~~~G~~~~~~~g~  229 (266)
                      ||.+.++......       ... .+...... .+.         ..+..++++|++++.++..+. ...|..|..++|+
T Consensus       490 pg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~  569 (660)
T 1z7e_A          490 PFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPE  569 (660)
T ss_dssp             ECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGG
T ss_pred             CCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHHhCccccCCCeEEEECCCC
Confidence            9999887653210       001 11111100 011         124569999999997665443 2457777766664


Q ss_pred             -cccC
Q 024553          230 -TVNS  233 (266)
Q Consensus       230 -~~~~  233 (266)
                       .+.+
T Consensus       570 ~~~s~  574 (660)
T 1z7e_A          570 NEASI  574 (660)
T ss_dssp             GEEEH
T ss_pred             CCcCH
Confidence             5543

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.00  E-value=2e-08  Score=85.57  Aligned_cols=182  Identities=11%  Similarity=-0.001  Sum_probs=113.1

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .++.++.+|+++..                  ...+|+|||+||......  ..++.++.+++|+.++..+++.+...  
T Consensus        75 ~~~~~~~~D~~~~~------------------~~~~d~vih~A~~~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~--  132 (343)
T 2b69_A           75 ENFELINHDVVEPL------------------YIEVDQIYHLASPASPPN--YMYNPIKTLKTNTIGTLNMLGLAKRV--  132 (343)
T ss_dssp             TTEEEEECCTTSCC------------------CCCCSEEEECCSCCSHHH--HTTCHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred             CceEEEeCccCChh------------------hcCCCEEEECccccCchh--hhhCHHHHHHHHHHHHHHHHHHHHHh--
Confidence            45788889988642                  246899999999753211  13456788999999999999988542  


Q ss_pred             cCCCCCeEEEEcCCcccccccc-cCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNA-QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                        +  .++|++||...+..... .++.....     +..+..+...|+.+|.+.+.+++.++.+.      ++.++.+.|
T Consensus       133 --~--~~~v~~SS~~v~g~~~~~~~~E~~~~-----~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~------~~~~~ilrp  197 (343)
T 2b69_A          133 --G--ARLLLASTSEVYGDPEVHPQSEDYWG-----HVNPIGPRACYDEGKRVAETMCYAYMKQE------GVEVRVARI  197 (343)
T ss_dssp             --T--CEEEEEEEGGGGBSCSSSSBCTTCCC-----BCCSSSTTHHHHHHHHHHHHHHHHHHHHH------CCCEEEEEE
T ss_pred             --C--CcEEEECcHHHhCCCCCCCCcccccc-----cCCCCCCCCchHHHHHHHHHHHHHHHHHh------CCcEEEEEE
Confidence              2  49999999776532111 11111000     01233445789999999999999888764      678999999


Q ss_pred             CcccCCccCcch-hHH-HHHHHHHH-HH---h------hcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          170 GVVKTNIMREVP-SFL-SLMAFTVL-KL---L------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       170 G~v~T~~~~~~~-~~~-~~~~~~~~-~~---~------~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      |.+.++...... ... .+...... .+   .      ..+..++++|++++.++..+  ..|.| ..++++.+.
T Consensus       198 ~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~--~~~~~-~i~~~~~~s  269 (343)
T 2b69_A          198 FNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN--VSSPV-NLGNPEEHT  269 (343)
T ss_dssp             CCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSS--CCSCE-EESCCCEEE
T ss_pred             cceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcC--CCCeE-EecCCCCCc
Confidence            999887643210 010 11111111 01   1      12458999999999665432  24444 445555554

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=98.98  E-value=7.9e-10  Score=92.34  Aligned_cols=177  Identities=12%  Similarity=-0.007  Sum_probs=113.3

Q ss_pred             EEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCCC
Q 024553           16 FQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVP   95 (266)
Q Consensus        16 i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~   95 (266)
                      +.+|+++.+++.++++..           ++|+|||+||....  ..+.+++++.+++|+.++..+++.+..    .+  
T Consensus        36 ~~~D~~d~~~~~~~~~~~-----------~~d~vih~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~--   96 (299)
T 1n2s_A           36 FCGDFSNPKGVAETVRKL-----------RPDVIVNAAAHTAV--DKAESEPELAQLLNATSVEAIAKAANE----TG--   96 (299)
T ss_dssp             SCCCTTCHHHHHHHHHHH-----------CCSEEEECCCCCCH--HHHTTCHHHHHHHHTHHHHHHHHHHTT----TT--
T ss_pred             ccccCCCHHHHHHHHHhc-----------CCCEEEECcccCCH--hhhhcCHHHHHHHHHHHHHHHHHHHHH----cC--
Confidence            358999999888777533           58999999997532  123456789999999999999988833    33  


Q ss_pred             CeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcccCC
Q 024553           96 SRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN  175 (266)
Q Consensus        96 ~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~T~  175 (266)
                      .++|++||...+.....         ....+..+..+...|+.+|.+.+.+++.+    .   .   +++.+.||.+.++
T Consensus        97 ~~~v~~SS~~vy~~~~~---------~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~----~---~---~~~ilRp~~v~G~  157 (299)
T 1n2s_A           97 AWVVHYSTDYVFPGTGD---------IPWQETDATSPLNVYGKTKLAGEKALQDN----C---P---KHLIFRTSWVYAG  157 (299)
T ss_dssp             CEEEEEEEGGGSCCCTT---------CCBCTTSCCCCSSHHHHHHHHHHHHHHHH----C---S---SEEEEEECSEECS
T ss_pred             CcEEEEecccEEeCCCC---------CCCCCCCCCCCccHHHHHHHHHHHHHHHh----C---C---CeEEEeeeeecCC
Confidence            48999999876543211         01112223334568999999999988653    2   2   6788999999887


Q ss_pred             ccCcchhHHHHHHHHHH-HHh-------hcCCCHHHHHHHHHHHhcCCC-Cc-ccceeecCCCcccc
Q 024553          176 IMREVPSFLSLMAFTVL-KLL-------GLLQSPEKGINSVLDAALAPP-ET-SGVYFFGGKGRTVN  232 (266)
Q Consensus       176 ~~~~~~~~~~~~~~~~~-~~~-------~~~~~p~~~a~~~~~~~~~~~-~~-~G~~~~~~~g~~~~  232 (266)
                      ...+....  ....... .++       ..+..++++|++++.++..+. .. .|..|+.++++.+.
T Consensus       158 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~i~~~~~~s  222 (299)
T 1n2s_A          158 KGNNFAKT--MLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGTTT  222 (299)
T ss_dssp             SSCCHHHH--HHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBSCEE
T ss_pred             CcCcHHHH--HHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHHHHHhccccccCceEEEeCCCCCC
Confidence            65432111  1110000 011       123358999999997765442 22 35566666666554

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=98.96  E-value=3.5e-11  Score=95.65  Aligned_cols=159  Identities=13%  Similarity=0.019  Sum_probs=103.9

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      ++.++.+|+++.+++.       +      ..  +|+||||||....    +.+.+++.+++|+.++..+++.+.+    
T Consensus        47 ~~~~~~~D~~~~~~~~-------~------~~--~d~vi~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----  103 (215)
T 2a35_A           47 RLDNPVGPLAELLPQL-------D------GS--IDTAFCCLGTTIK----EAGSEEAFRAVDFDLPLAVGKRALE----  103 (215)
T ss_dssp             TEECCBSCHHHHGGGC-------C------SC--CSEEEECCCCCHH----HHSSHHHHHHHHTHHHHHHHHHHHH----
T ss_pred             CceEEeccccCHHHHH-------H------hh--hcEEEECeeeccc----cCCCHHHHHHhhHHHHHHHHHHHHH----
Confidence            5778888888765442       2      23  8999999997531    2456889999999999999988754    


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeE-EEEecCC
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVS-VIAADPG  170 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~-v~~v~PG  170 (266)
                      .+ .+++|++||..++.                      .+...|+.+|.+.+.+++          ..+++ ++.+.||
T Consensus       104 ~~-~~~~v~~Ss~~~~~----------------------~~~~~y~~sK~~~e~~~~----------~~~~~~~~~vrp~  150 (215)
T 2a35_A          104 MG-ARHYLVVSALGADA----------------------KSSIFYNRVKGELEQALQ----------EQGWPQLTIARPS  150 (215)
T ss_dssp             TT-CCEEEEECCTTCCT----------------------TCSSHHHHHHHHHHHHHT----------TSCCSEEEEEECC
T ss_pred             cC-CCEEEEECCcccCC----------------------CCccHHHHHHHHHHHHHH----------HcCCCeEEEEeCc
Confidence            23 56999999987531                      123579999999998874          24777 9999999


Q ss_pred             cccCCccCc-chhHHH--HHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCccc
Q 024553          171 VVKTNIMRE-VPSFLS--LMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  231 (266)
Q Consensus       171 ~v~T~~~~~-~~~~~~--~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~  231 (266)
                      ++.++.... ......  ...... . ...+.+++++|+.++.++..+.  .|.| ...+++.+
T Consensus       151 ~v~g~~~~~~~~~~~~~~~~~~~~-~-~~~~i~~~Dva~~~~~~~~~~~--~~~~-~i~~~~~~  209 (215)
T 2a35_A          151 LLFGPREEFRLAEILAAPIARILP-G-KYHGIEACDLARALWRLALEEG--KGVR-FVESDELR  209 (215)
T ss_dssp             SEESTTSCEEGGGGTTCCCC-----C-HHHHHHHHHHHHHHHHHHTCCC--SEEE-EEEHHHHH
T ss_pred             eeeCCCCcchHHHHHHHhhhhccC-C-CcCcEeHHHHHHHHHHHHhcCC--CCce-EEcHHHHH
Confidence            998875431 111000  000000 0 1123489999999997776543  3444 33444443

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=98.96  E-value=3.4e-09  Score=95.32  Aligned_cols=186  Identities=11%  Similarity=0.093  Sum_probs=115.9

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .++.++.+|+++.+++.      .        ...+|+||||||....     ...+++.+.+|+.++..+++.+..   
T Consensus       211 ~~v~~v~~Dl~d~~~l~------~--------~~~~D~Vih~Aa~~~~-----~~~~~~~~~~Nv~gt~~ll~~a~~---  268 (508)
T 4f6l_B          211 SNIEVIVGDFECMDDVV------L--------PENMDTIIHAGARTDH-----FGDDDEFEKVNVQGTVDVIRLAQQ---  268 (508)
T ss_dssp             TTEEEEEEBTTBCSSCC------C--------SSCCSEEEECCCC-------------CCHHHHHHHHHHHHHHHHT---
T ss_pred             CceEEEecCCcccccCC------C--------ccCCCEEEECCceecC-----CCCHHHHhhhHHHHHHHHHHHHHh---
Confidence            47999999999987775      1        2579999999998632     235688999999999999998855   


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCC---CChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKC---YPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                        . ..++|++||..+ ..... ....   ...+.+...   ......|+.+|.+.+.+++.++.       .++.++.+
T Consensus       269 --~-~~~~v~iSS~~v-G~~~~-~~~~---~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-------~gi~~~il  333 (508)
T 4f6l_B          269 --H-HARLIYVSTISV-GTYFD-IDTE---DVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN-------NGLDGRIV  333 (508)
T ss_dssp             --T-TCEEEEEEESCT-TSEEC-TTCS---CCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH-------TTCEEEEE
T ss_pred             --C-CCcEEEeCChhh-ccCCc-cCCc---CcccccccccccccCCCcHHHHHHHHHHHHHHHHH-------cCCCEEEE
Confidence              2 579999999876 21100 0000   000111111   22457799999999999977542       48899999


Q ss_pred             cCCcccCCccCcch-----h-HHHHHHHHHHH----H------hhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCccc
Q 024553          168 DPGVVKTNIMREVP-----S-FLSLMAFTVLK----L------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  231 (266)
Q Consensus       168 ~PG~v~T~~~~~~~-----~-~~~~~~~~~~~----~------~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~  231 (266)
                      .||.|.++......     . ...........    +      ...+..++++|++++.++..+.  .|..|...+++.+
T Consensus       334 Rp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~--~~~~~nl~~~~~~  411 (508)
T 4f6l_B          334 RVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT--PQIIYHVLSPNKM  411 (508)
T ss_dssp             EECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGGSEEECEEHHHHHHHHHHHTTBCC--SCSEEEESCSCEE
T ss_pred             ecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccCceEEEEcHHHHHHHHHHHHhCCC--CCCEEEeCCCCCC
Confidence            99999877654320     0 01111110000    0      0124568999999997665554  5666666777766


Q ss_pred             cCCc
Q 024553          232 NSSA  235 (266)
Q Consensus       232 ~~~~  235 (266)
                      .+..
T Consensus       412 s~~e  415 (508)
T 4f6l_B          412 PVKS  415 (508)
T ss_dssp             EHHH
T ss_pred             CHHH
Confidence            5433

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=98.94  E-value=2.1e-08  Score=86.36  Aligned_cols=168  Identities=12%  Similarity=0.008  Sum_probs=116.9

Q ss_pred             EEEEEecC-CCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           13 LEAFQVDL-SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        13 ~~~i~~Dl-s~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      +.++.+|. ++.+++.++++             .+|+|||+||...+      +..++.+++|+.++..+++.+    ++
T Consensus        26 ~~v~~~d~~~d~~~l~~~~~-------------~~d~Vih~a~~~~~------~~~~~~~~~n~~~~~~l~~a~----~~   82 (369)
T 3st7_A           26 HHIFEVHRQTKEEELESALL-------------KADFIVHLAGVNRP------EHDKEFSLGNVSYLDHVLDIL----TR   82 (369)
T ss_dssp             CEEEECCTTCCHHHHHHHHH-------------HCSEEEECCCSBCT------TCSTTCSSSCCBHHHHHHHHH----TT
T ss_pred             CEEEEECCCCCHHHHHHHhc-------------cCCEEEECCcCCCC------CCHHHHHHHHHHHHHHHHHHH----HH
Confidence            47888999 89988887764             37999999998642      356778999999999888887    33


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCc
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV  171 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~  171 (266)
                      .+...++|++||..++.                        ...|+.+|.+.+.+++.++++.      ++.++.+.|+.
T Consensus        83 ~~~~~~~v~~Ss~~~~~------------------------~~~Y~~sK~~~E~~~~~~~~~~------g~~~~i~R~~~  132 (369)
T 3st7_A           83 NTKKPAILLSSSIQATQ------------------------DNPYGESKLQGEQLLREYAEEY------GNTVYIYRWPN  132 (369)
T ss_dssp             CSSCCEEEEEEEGGGGS------------------------CSHHHHHHHHHHHHHHHHHHHH------CCCEEEEEECE
T ss_pred             hCCCCeEEEeCchhhcC------------------------CCCchHHHHHHHHHHHHHHHHh------CCCEEEEECCc
Confidence            33134899999987531                        4579999999999999988875      56788899999


Q ss_pred             ccCCccCcc-hhHHHHHHHHHHH--Hh--------hcCCCHHHHHHHHHHHhcCCCCcccceeecCCCccccC
Q 024553          172 VKTNIMREV-PSFLSLMAFTVLK--LL--------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNS  233 (266)
Q Consensus       172 v~T~~~~~~-~~~~~~~~~~~~~--~~--------~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~~  233 (266)
                      +.++..... .............  ++        ..+..++++|++++.++..+....|..|..+.++.+.+
T Consensus       133 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~i~~~~~~s~  205 (369)
T 3st7_A          133 LFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTL  205 (369)
T ss_dssp             EECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCCCEETTEECCSCCEEEEH
T ss_pred             eeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCcccCCceEEeCCCCceeH
Confidence            987754321 1111111111100  00        12346999999999877665544377777676666654

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=98.92  E-value=1.3e-09  Score=87.14  Aligned_cols=170  Identities=12%  Similarity=-0.040  Sum_probs=99.9

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      ..+.++.+|+++.++     +.          ...+|+||||||....         .....+|+.++..+++.+    +
T Consensus        43 ~~~~~~~~D~~d~~~-----~~----------~~~~d~vi~~ag~~~~---------~~~~~~n~~~~~~l~~a~----~   94 (224)
T 3h2s_A           43 ATVATLVKEPLVLTE-----AD----------LDSVDAVVDALSVPWG---------SGRGYLHLDFATHLVSLL----R   94 (224)
T ss_dssp             TTSEEEECCGGGCCH-----HH----------HTTCSEEEECCCCCTT---------SSCTHHHHHHHHHHHHTC----T
T ss_pred             CCceEEecccccccH-----hh----------cccCCEEEECCccCCC---------cchhhHHHHHHHHHHHHH----H
Confidence            468899999999887     11          1468999999998611         112456777765555554    5


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                      +.+  +++|++||..+......... . .    ..+.....+...|+.+|.+.+.+. .+   ..   ..+++++.+.||
T Consensus        95 ~~~--~~~v~~SS~~~~~~~~~~~~-~-~----~~~~~~~~~~~~y~~sK~~~e~~~-~~---~~---~~~i~~~ivrp~  159 (224)
T 3h2s_A           95 NSD--TLAVFILGSASLAMPGADHP-M-I----LDFPESAASQPWYDGALYQYYEYQ-FL---QM---NANVNWIGISPS  159 (224)
T ss_dssp             TCC--CEEEEECCGGGSBCTTCSSC-G-G----GGCCGGGGGSTTHHHHHHHHHHHH-HH---TT---CTTSCEEEEEEC
T ss_pred             HcC--CcEEEEecceeeccCCCCcc-c-c----ccCCCCCccchhhHHHHHHHHHHH-HH---Hh---cCCCcEEEEcCc
Confidence            543  79999999765432111100 0 0    000111112567999999988542 22   22   578999999999


Q ss_pred             cccCCccCcchh-HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecC
Q 024553          171 VVKTNIMREVPS-FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGG  226 (266)
Q Consensus       171 ~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~  226 (266)
                      ++.++....... .....  ........+.+++++|++++.++..+. ..|+.|...
T Consensus       160 ~v~g~~~~~~~~~~~~~~--~~~~~~~~~i~~~DvA~~~~~~l~~~~-~~g~~~~~~  213 (224)
T 3h2s_A          160 EAFPSGPATSYVAGKDTL--LVGEDGQSHITTGNMALAILDQLEHPT-AIRDRIVVR  213 (224)
T ss_dssp             SBCCCCCCCCEEEESSBC--CCCTTSCCBCCHHHHHHHHHHHHHSCC-CTTSEEEEE
T ss_pred             cccCCCcccCceeccccc--ccCCCCCceEeHHHHHHHHHHHhcCcc-ccCCEEEEe
Confidence            998773211100 00000  000011235699999999998776654 445555533

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=98.87  E-value=2.6e-09  Score=88.71  Aligned_cols=176  Identities=6%  Similarity=-0.096  Sum_probs=109.9

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      ..+.++.+|+++.+++.++++            +++|+|||+||..       ..+.+..+++|+.++..+++.+.    
T Consensus        41 ~~~~~~~~Dl~d~~~~~~~~~------------~~~d~vih~a~~~-------~~~~~~~~~~n~~~~~~ll~a~~----   97 (286)
T 3gpi_A           41 AGVQTLIADVTRPDTLASIVH------------LRPEILVYCVAAS-------EYSDEHYRLSYVEGLRNTLSALE----   97 (286)
T ss_dssp             TTCCEEECCTTCGGGCTTGGG------------GCCSEEEECHHHH-------HHC-----CCSHHHHHHHHHHTT----
T ss_pred             cCCceEEccCCChHHHHHhhc------------CCCCEEEEeCCCC-------CCCHHHHHHHHHHHHHHHHHHHh----
Confidence            357889999999988766542            3599999999873       23457888999999999988884    


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                      +.+ .+++|++||...+.....         ....+..+..+...|+.+|.+.+.+ +..           +.++.+.||
T Consensus        98 ~~~-~~~~v~~SS~~vyg~~~~---------~~~~E~~~~~p~~~Y~~sK~~~E~~-~~~-----------~~~~ilR~~  155 (286)
T 3gpi_A           98 GAP-LQHVFFVSSTGVYGQEVE---------EWLDEDTPPIAKDFSGKRMLEAEAL-LAA-----------YSSTILRFS  155 (286)
T ss_dssp             TSC-CCEEEEEEEGGGCCCCCS---------SEECTTSCCCCCSHHHHHHHHHHHH-GGG-----------SSEEEEEEC
T ss_pred             hCC-CCEEEEEcccEEEcCCCC---------CCCCCCCCCCCCChhhHHHHHHHHH-Hhc-----------CCeEEEecc
Confidence            333 579999999876542211         1112233444567899999998887 432           578889999


Q ss_pred             cccCCccCcchhHHHHHHHHH--HHHhhcCCCHHHHHHHHHHHhcCCC-CcccceeecCCCcccc
Q 024553          171 VVKTNIMREVPSFLSLMAFTV--LKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRTVN  232 (266)
Q Consensus       171 ~v~T~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~a~~~~~~~~~~~-~~~G~~~~~~~g~~~~  232 (266)
                      .+.++....+...... ....  ......+..++++|++++.++..+. ...|..|..++|+.+.
T Consensus       156 ~v~G~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~~~s  219 (286)
T 3gpi_A          156 GIYGPGRLRMIRQAQT-PEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPLP  219 (286)
T ss_dssp             EEEBTTBCHHHHHTTC-GGGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEECCSCCEE
T ss_pred             cccCCCchhHHHHHHh-cccCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEeCCCCCC
Confidence            9987764421110000 0000  0001124578999999997776542 3445666656666654

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=98.86  E-value=3.8e-08  Score=82.72  Aligned_cols=162  Identities=14%  Similarity=-0.006  Sum_probs=104.1

Q ss_pred             CcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcc
Q 024553           45 SIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFF  124 (266)
Q Consensus        45 ~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  124 (266)
                      .+|+|||+||....  ....+..+..+. |+.++..+++.+...    + ..++|++||...+.....         ...
T Consensus        69 ~~d~vi~~a~~~~~--~~~~~~~~~~~~-n~~~~~~ll~a~~~~----~-v~~~v~~SS~~v~~~~~~---------~~~  131 (321)
T 3vps_A           69 DVRLVYHLASHKSV--PRSFKQPLDYLD-NVDSGRHLLALCTSV----G-VPKVVVGSTCEVYGQADT---------LPT  131 (321)
T ss_dssp             TEEEEEECCCCCCH--HHHTTSTTTTHH-HHHHHHHHHHHHHHH----T-CCEEEEEEEGGGGCSCSS---------SSB
T ss_pred             cCCEEEECCccCCh--HHHHhCHHHHHH-HHHHHHHHHHHHHHc----C-CCeEEEecCHHHhCCCCC---------CCC
Confidence            68999999998642  112233456677 999999998888543    2 469999999876543211         112


Q ss_pred             cCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCe-EEEEecCCcccCCccCcchhHHHHHHHHHHH-Hh---h---
Q 024553          125 LRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHV-SVIAADPGVVKTNIMREVPSFLSLMAFTVLK-LL---G---  196 (266)
Q Consensus       125 ~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i-~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~~---~---  196 (266)
                      .+..+..+...|+.+|.+.+.+++.++.+      .++ .++.+.|+.+.++..........+....... ++   +   
T Consensus       132 ~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~------~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (321)
T 3vps_A          132 PEDSPLSPRSPYAASKVGLEMVAGAHQRA------SVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGE  205 (321)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHS------SSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSC
T ss_pred             CCCCCCCCCChhHHHHHHHHHHHHHHHHH------cCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCC
Confidence            22334445678999999999999888876      377 9999999999887654311111111111111 11   1   


Q ss_pred             ---cCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          197 ---LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       197 ---~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                         .+..++++|++++.++..+..  | .|+.++|+.+.
T Consensus       206 ~~~~~v~v~Dva~~~~~~~~~~~~--g-~~~i~~~~~~s  241 (321)
T 3vps_A          206 QRRDFTYITDVVDKLVALANRPLP--S-VVNFGSGQSLS  241 (321)
T ss_dssp             CEECEEEHHHHHHHHHHGGGSCCC--S-EEEESCSCCEE
T ss_pred             ceEceEEHHHHHHHHHHHHhcCCC--C-eEEecCCCccc
Confidence               234799999999966554433  6 66666676654

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=98.78  E-value=1.6e-08  Score=83.81  Aligned_cols=155  Identities=6%  Similarity=-0.104  Sum_probs=101.9

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      .+.++.+|+++.+++.+++             ..+|+|||+||...       +   .  ++|+.++..+++.+.    +
T Consensus        46 ~~~~~~~D~~d~~~l~~~~-------------~~~d~vi~~a~~~~-------~---~--~~n~~~~~~l~~a~~----~   96 (287)
T 2jl1_A           46 GVEVRHGDYNQPESLQKAF-------------AGVSKLLFISGPHY-------D---N--TLLIVQHANVVKAAR----D   96 (287)
T ss_dssp             TCEEEECCTTCHHHHHHHT-------------TTCSEEEECCCCCS-------C---H--HHHHHHHHHHHHHHH----H
T ss_pred             CCeEEEeccCCHHHHHHHH-------------hcCCEEEEcCCCCc-------C---c--hHHHHHHHHHHHHHH----H
Confidence            4788999999998877655             25899999999621       1   1  578888888887773    3


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCc
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV  171 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~  171 (266)
                      .+ .++||++||..+..                       ....|+.+|.+.+.+++.          .++.++.+.||+
T Consensus        97 ~~-~~~~v~~Ss~~~~~-----------------------~~~~y~~~K~~~E~~~~~----------~~~~~~ilrp~~  142 (287)
T 2jl1_A           97 AG-VKHIAYTGYAFAEE-----------------------SIIPLAHVHLATEYAIRT----------TNIPYTFLRNAL  142 (287)
T ss_dssp             TT-CSEEEEEEETTGGG-----------------------CCSTHHHHHHHHHHHHHH----------TTCCEEEEEECC
T ss_pred             cC-CCEEEEECCCCCCC-----------------------CCCchHHHHHHHHHHHHH----------cCCCeEEEECCE
Confidence            33 56999999987521                       113699999999988742          467889999998


Q ss_pred             ccCCccCcchhHHHHHHHHHH-----HHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          172 VKTNIMREVPSFLSLMAFTVL-----KLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       172 v~T~~~~~~~~~~~~~~~~~~-----~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      +.++.......  ........     .....+..++++|++++.++..+ ...|..|..++++.+.
T Consensus       143 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~-~~~g~~~~i~~~~~~s  205 (287)
T 2jl1_A          143 YTDFFVNEGLR--ASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEE-GHENKTYNLVSNQPWT  205 (287)
T ss_dssp             BHHHHSSGGGH--HHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSS-SCTTEEEEECCSSCBC
T ss_pred             eccccchhhHH--HHhhCCceeccCCCCccCccCHHHHHHHHHHHhcCC-CCCCcEEEecCCCcCC
Confidence            87654221111  11100000     00123568999999999766543 3457666666665554

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=98.76  E-value=2e-08  Score=93.72  Aligned_cols=138  Identities=15%  Similarity=0.030  Sum_probs=95.5

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      ..+.++.+|+++.+++.+++++.           ++|+|||+||.....  ...+..++.+++|+.++..+++.+..   
T Consensus        61 ~~v~~v~~Dl~d~~~l~~~~~~~-----------~~D~Vih~A~~~~~~--~~~~~~~~~~~~Nv~gt~~ll~a~~~---  124 (699)
T 1z45_A           61 HHIPFYEVDLCDRKGLEKVFKEY-----------KIDSVIHFAGLKAVG--ESTQIPLRYYHNNILGTVVLLELMQQ---  124 (699)
T ss_dssp             SCCCEEECCTTCHHHHHHHHHHS-----------CCCEEEECCSCCCHH--HHHHSHHHHHHHHHHHHHHHHHHHHH---
T ss_pred             CceEEEEcCCCCHHHHHHHHHhC-----------CCCEEEECCcccCcC--ccccCHHHHHHHHHHHHHHHHHHHHH---
Confidence            35778999999999888776421           689999999985321  11233467899999999998876643   


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                       .+ .++||++||.+.+......-+.     ....+..+..+...|+.+|.+.+.+++.++.+.    ..++.++.+.|+
T Consensus       125 -~~-~~~iV~~SS~~vyg~~~~~~~~-----~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~g~~~~ilR~~  193 (699)
T 1z45_A          125 -YN-VSKFVFSSSATVYGDATRFPNM-----IPIPEECPLGPTNPYGHTKYAIENILNDLYNSD----KKSWKFAILRYF  193 (699)
T ss_dssp             -HT-CCEEEEEEEGGGGCCGGGSTTC-----CSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS----TTSCEEEEEEEC
T ss_pred             -cC-CCEEEEECcHHHhCCCcccccc-----CCccccCCCCCCChHHHHHHHHHHHHHHHHHhc----cCCCcEEEEEec
Confidence             23 5799999998764321100000     001112233345689999999999999988875    368899999998


Q ss_pred             cccCC
Q 024553          171 VVKTN  175 (266)
Q Consensus       171 ~v~T~  175 (266)
                      .+..+
T Consensus       194 ~vyG~  198 (699)
T 1z45_A          194 NPIGA  198 (699)
T ss_dssp             EEECC
T ss_pred             cccCC
Confidence            88655

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=98.70  E-value=2.7e-08  Score=82.35  Aligned_cols=152  Identities=6%  Similarity=-0.078  Sum_probs=94.7

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      .+.++.+|+++.+++.+++             ..+|+|||+||...              ..|+.++..+++.+.    +
T Consensus        45 ~~~~~~~D~~d~~~~~~~~-------------~~~d~vi~~a~~~~--------------~~~~~~~~~l~~a~~----~   93 (286)
T 2zcu_A           45 GITVRQADYGDEAALTSAL-------------QGVEKLLLISSSEV--------------GQRAPQHRNVINAAK----A   93 (286)
T ss_dssp             TCEEEECCTTCHHHHHHHT-------------TTCSEEEECC----------------------CHHHHHHHHHH----H
T ss_pred             CCeEEEcCCCCHHHHHHHH-------------hCCCEEEEeCCCCc--------------hHHHHHHHHHHHHHH----H
Confidence            4778999999998877654             25799999999621              135666666666553    3


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCc
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV  171 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~  171 (266)
                      .+ .++||++||..+.                       .....|+.+|.+.+.+++.          .+++++.+.||+
T Consensus        94 ~~-~~~~v~~Ss~~~~-----------------------~~~~~y~~sK~~~e~~~~~----------~~~~~~ilrp~~  139 (286)
T 2zcu_A           94 AG-VKFIAYTSLLHAD-----------------------TSPLGLADEHIETEKMLAD----------SGIVYTLLRNGW  139 (286)
T ss_dssp             HT-CCEEEEEEETTTT-----------------------TCCSTTHHHHHHHHHHHHH----------HCSEEEEEEECC
T ss_pred             cC-CCEEEEECCCCCC-----------------------CCcchhHHHHHHHHHHHHH----------cCCCeEEEeChH
Confidence            33 5699999997752                       1123699999999988742          367899999998


Q ss_pred             ccCCccCcchhHHHHHHHHHH-----HHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          172 VKTNIMREVPSFLSLMAFTVL-----KLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       172 v~T~~~~~~~~~~~~~~~~~~-----~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      +.++.......   .......     .....+.+++++|++++.++..+. ..|..|..++++.+.
T Consensus       140 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~-~~g~~~~i~~~~~~s  201 (286)
T 2zcu_A          140 YSENYLASAPA---ALEHGVFIGAAGDGKIASATRADYAAAAARVISEAG-HEGKVYELAGDSAWT  201 (286)
T ss_dssp             BHHHHHTTHHH---HHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSSS-CTTCEEEECCSSCBC
T ss_pred             HhhhhHHHhHH---hhcCCceeccCCCCccccccHHHHHHHHHHHhcCCC-CCCceEEEeCCCcCC
Confidence            86654221110   0000000     011235689999999997766543 456666666665554

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=98.62  E-value=1.1e-06  Score=75.01  Aligned_cols=184  Identities=10%  Similarity=0.002  Sum_probs=106.2

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .++.++.+|+++.+++.++++          ....+|+|||+||...       ++.++.+++|+.++..+++.+.+...
T Consensus        48 ~~~~~~~~Dl~d~~~~~~~~~----------~~~~~d~vih~a~~~~-------~~~~~~~~~n~~~~~~l~~a~~~~~~  110 (364)
T 2v6g_A           48 NPINYVQCDISDPDDSQAKLS----------PLTDVTHVFYVTWANR-------STEQENCEANSKMFRNVLDAVIPNCP  110 (364)
T ss_dssp             SCCEEEECCTTSHHHHHHHHT----------TCTTCCEEEECCCCCC-------SSHHHHHHHHHHHHHHHHHHHTTTCT
T ss_pred             CceEEEEeecCCHHHHHHHHh----------cCCCCCEEEECCCCCc-------chHHHHHHHhHHHHHHHHHHHHHhcc
Confidence            357899999999988877653          1224999999999752       35788999999999999998865421


Q ss_pred             cCCCCCeEE-------EEcCCcccccccccCCccccccCcccCCCC-CChhhcchHhHHHHHHHHHHHHHhhCCCCCCC-
Q 024553           91 NSPVPSRIV-------NVTSFTHRNVFNAQVNNETITGKFFLRSKC-YPCARIYEYSKLCLLIFSYELHRNLGLDKSRH-  161 (266)
Q Consensus        91 ~~~~~~~iv-------~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~-  161 (266)
                        + -.++|       ++||...+......       .....+..+ .+....|    .+.+.+++.++.+      .+ 
T Consensus       111 --~-~~~~v~~~g~~i~~Ss~~vyg~~~~~-------~~~~~E~~~~~~~~~~y----~~~E~~~~~~~~~------~~~  170 (364)
T 2v6g_A          111 --N-LKHISLQTGRKHYMGPFESYGKIESH-------DPPYTEDLPRLKYMNFY----YDLEDIMLEEVEK------KEG  170 (364)
T ss_dssp             --T-CCEEEEECCTHHHHCCGGGTTTSCCC-------CSSBCTTSCCCSSCCHH----HHHHHHHHHHHTT------STT
T ss_pred             --c-cceEEeccCceEEEechhhccccccC-------CCCCCccccCCccchhh----HHHHHHHHHHhhc------CCC
Confidence              1 34776       67776554321000       000111111 1223345    2345555444432      44 


Q ss_pred             eEEEEecCCcccCCccCcchhH-HHH-HHHHH----HHH---h---------hcCCCHHHHHHHHHHHhcCCCCccccee
Q 024553          162 VSVIAADPGVVKTNIMREVPSF-LSL-MAFTV----LKL---L---------GLLQSPEKGINSVLDAALAPPETSGVYF  223 (266)
Q Consensus       162 i~v~~v~PG~v~T~~~~~~~~~-~~~-~~~~~----~~~---~---------~~~~~p~~~a~~~~~~~~~~~~~~G~~~  223 (266)
                      +.++.+.|+.+..+........ ... .....    ..+   .         -.....+++|++++.++..+ ...|..|
T Consensus       171 ~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~-~~~g~~~  249 (364)
T 2v6g_A          171 LTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVDP-YAKNEAF  249 (364)
T ss_dssp             CEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHHHHHHHHHHHCG-GGTTEEE
T ss_pred             ceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHHHHHHHHHHHhCC-CCCCceE
Confidence            9999999999988765432111 111 00001    000   0         01223488999999766543 3356666


Q ss_pred             ecCCCcccc
Q 024553          224 FGGKGRTVN  232 (266)
Q Consensus       224 ~~~~g~~~~  232 (266)
                      +.++++.+.
T Consensus       250 ni~~~~~~s  258 (364)
T 2v6g_A          250 NVSNGDVFK  258 (364)
T ss_dssp             EECCSCCBC
T ss_pred             EecCCCcCC
Confidence            656666554

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=98.45  E-value=3.9e-07  Score=75.54  Aligned_cols=155  Identities=13%  Similarity=0.145  Sum_probs=91.1

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      ..+.++.+|+++.+++.+++             ..+|+|||+||...+.            ..|+.++    +.+++.++
T Consensus        44 ~~v~~~~~D~~d~~~l~~~~-------------~~~d~vi~~a~~~~~~------------~~~~~~~----~~l~~aa~   94 (289)
T 3e48_A           44 GKVSVRQLDYFNQESMVEAF-------------KGMDTVVFIPSIIHPS------------FKRIPEV----ENLVYAAK   94 (289)
T ss_dssp             TTBEEEECCTTCHHHHHHHT-------------TTCSEEEECCCCCCSH------------HHHHHHH----HHHHHHHH
T ss_pred             CCCEEEEcCCCCHHHHHHHH-------------hCCCEEEEeCCCCccc------------hhhHHHH----HHHHHHHH
Confidence            35889999999998887655             3689999999975321            2244444    44555556


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                      +.+ -++||++||.....                    .    ..|..++...  .   +...+.   ..++.++.+.||
T Consensus        95 ~~g-v~~iv~~Ss~~~~~--------------------~----~~~~~~~~~~--~---~e~~~~---~~g~~~~ilrp~  141 (289)
T 3e48_A           95 QSG-VAHIIFIGYYADQH--------------------N----NPFHMSPYFG--Y---ASRLLS---TSGIDYTYVRMA  141 (289)
T ss_dssp             HTT-CCEEEEEEESCCST--------------------T----CCSTTHHHHH--H---HHHHHH---HHCCEEEEEEEC
T ss_pred             HcC-CCEEEEEcccCCCC--------------------C----CCCccchhHH--H---HHHHHH---HcCCCEEEEecc
Confidence            555 57999999965311                    1    1122222211  1   112222   358899999999


Q ss_pred             cccCCccCcchhHHHHHHHH-HHHHhh----cCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          171 VVKTNIMREVPSFLSLMAFT-VLKLLG----LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       171 ~v~T~~~~~~~~~~~~~~~~-~~~~~~----~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      ++.+++......   ..... ...+.+    .+.+++|+|+.++.++..+... |..|... ++.+.
T Consensus       142 ~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~-g~~~~~~-~~~~s  203 (289)
T 3e48_A          142 MYMDPLKPYLPE---LMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDTW-GKRYLLS-GYSYD  203 (289)
T ss_dssp             EESTTHHHHHHH---HHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGGT-TCEEEEC-CEEEE
T ss_pred             ccccccHHHHHH---HHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCcC-CceEEeC-CCcCC
Confidence            998775321110   00000 000011    1468999999999776655433 7667666 66654

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=98.42  E-value=6e-08  Score=80.93  Aligned_cols=159  Identities=11%  Similarity=-0.134  Sum_probs=94.8

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      .+.++.+|+++.+++.+++             ..+|+|||+||.....          ....|+.++    +.+++.+++
T Consensus        52 ~~~~~~~D~~d~~~l~~~~-------------~~~d~vi~~a~~~~~~----------~~~~~~~~~----~~~~~aa~~  104 (299)
T 2wm3_A           52 GAEVVQGDQDDQVIMELAL-------------NGAYATFIVTNYWESC----------SQEQEVKQG----KLLADLARR  104 (299)
T ss_dssp             TCEEEECCTTCHHHHHHHH-------------TTCSEEEECCCHHHHT----------CHHHHHHHH----HHHHHHHHH
T ss_pred             CCEEEEecCCCHHHHHHHH-------------hcCCEEEEeCCCCccc----------cchHHHHHH----HHHHHHHHH
Confidence            4788999999999887765             2589999999863210          123444444    444444454


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCc
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV  171 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~  171 (266)
                      .+ .++||++|+......                  ........|..+|.+.+.+++.          .+++++.+.||+
T Consensus       105 ~g-v~~iv~~S~~~~~~~------------------~~~~~~~~y~~sK~~~e~~~~~----------~gi~~~ilrp~~  155 (299)
T 2wm3_A          105 LG-LHYVVYSGLENIKKL------------------TAGRLAAAHFDGKGEVEEYFRD----------IGVPMTSVRLPC  155 (299)
T ss_dssp             HT-CSEEEECCCCCHHHH------------------TTTSCCCHHHHHHHHHHHHHHH----------HTCCEEEEECCE
T ss_pred             cC-CCEEEEEcCcccccc------------------CCCcccCchhhHHHHHHHHHHH----------CCCCEEEEeecH
Confidence            44 579999666443210                  0001235689999999988753          367899999999


Q ss_pred             ccCCccCcchhHH--HH---HHHHH-HHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecC
Q 024553          172 VKTNIMREVPSFL--SL---MAFTV-LKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGG  226 (266)
Q Consensus       172 v~T~~~~~~~~~~--~~---~~~~~-~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~  226 (266)
                      +.+++...+.+..  ..   ..... ......+.+++|+|+.++.++..++...|..|...
T Consensus       156 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~~  216 (299)
T 2wm3_A          156 YFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLS  216 (299)
T ss_dssp             EGGGGGTTTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHHHTTCEEECC
T ss_pred             HhhhchhhcCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhhhCCeEEEee
Confidence            9887644211100  00   00000 00011345899999999977765433356666644

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=98.40  E-value=2.1e-07  Score=76.94  Aligned_cols=163  Identities=5%  Similarity=-0.133  Sum_probs=97.5

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      .+.++.+|+++.+        +          ..+|+|||+||.....     +   .           .++.++..+++
T Consensus        48 ~~~~~~~D~~d~~--------~----------~~~d~vi~~a~~~~~~-----~---~-----------~~~~l~~a~~~   90 (286)
T 3ius_A           48 GAEPLLWPGEEPS--------L----------DGVTHLLISTAPDSGG-----D---P-----------VLAALGDQIAA   90 (286)
T ss_dssp             TEEEEESSSSCCC--------C----------TTCCEEEECCCCBTTB-----C---H-----------HHHHHHHHHHH
T ss_pred             CCeEEEecccccc--------c----------CCCCEEEECCCccccc-----c---H-----------HHHHHHHHHHh
Confidence            5788999999833        1          3689999999975321     0   0           12334444444


Q ss_pred             --CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           92 --SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        92 --~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                        .+ ..++|++||...+.....         ....+..+..+...|+.+|.+.+.+++.+         .++.++.+.|
T Consensus        91 ~~~~-~~~~v~~Ss~~vyg~~~~---------~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~---------~~~~~~ilRp  151 (286)
T 3ius_A           91 RAAQ-FRWVGYLSTTAVYGDHDG---------AWVDETTPLTPTAARGRWRVMAEQQWQAV---------PNLPLHVFRL  151 (286)
T ss_dssp             TGGG-CSEEEEEEEGGGGCCCTT---------CEECTTSCCCCCSHHHHHHHHHHHHHHHS---------TTCCEEEEEE
T ss_pred             hcCC-ceEEEEeecceecCCCCC---------CCcCCCCCCCCCCHHHHHHHHHHHHHHhh---------cCCCEEEEec
Confidence              22 579999999876542211         11122334444567999999999988654         2678999999


Q ss_pred             CcccCCccCcchhHHHHHHH--HHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          170 GVVKTNIMREVPSFLSLMAF--TVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       170 G~v~T~~~~~~~~~~~~~~~--~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      |.+.++..............  ........+...+++|++++.++..+.  .|..|+.++++.+.
T Consensus       152 ~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~--~g~~~~i~~~~~~s  214 (286)
T 3ius_A          152 AGIYGPGRGPFSKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAASMARPD--PGAVYNVCDDEPVP  214 (286)
T ss_dssp             CEEEBTTBSSSTTSSSSCCCEEECTTCCBCEEEHHHHHHHHHHHHHSCC--TTCEEEECCSCCBC
T ss_pred             cceECCCchHHHHHhcCCccccCCCCcccceEEHHHHHHHHHHHHhCCC--CCCEEEEeCCCCcc
Confidence            99987654332110000000  000011134578999999997766554  56566656676654

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=98.35  E-value=4.1e-07  Score=77.51  Aligned_cols=163  Identities=7%  Similarity=-0.051  Sum_probs=98.5

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      ..+.++.+|+++.+++.+++++           .++|+|||+||..                 |+.++..+++++...  
T Consensus        60 ~~v~~~~~Dl~d~~~l~~~~~~-----------~~~d~Vi~~a~~~-----------------n~~~~~~l~~aa~~~--  109 (346)
T 3i6i_A           60 KGAIIVYGLINEQEAMEKILKE-----------HEIDIVVSTVGGE-----------------SILDQIALVKAMKAV--  109 (346)
T ss_dssp             TTCEEEECCTTCHHHHHHHHHH-----------TTCCEEEECCCGG-----------------GGGGHHHHHHHHHHH--
T ss_pred             CCcEEEEeecCCHHHHHHHHhh-----------CCCCEEEECCchh-----------------hHHHHHHHHHHHHHc--
Confidence            3588999999999998887743           2689999999972                 778887777777442  


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                        +.-.++|. |+ .+..               ..+..+..+...|..+|...+.+.+.          .++.++.+.||
T Consensus       110 --g~v~~~v~-S~-~g~~---------------~~e~~~~~p~~~y~~sK~~~e~~l~~----------~g~~~tivrpg  160 (346)
T 3i6i_A          110 --GTIKRFLP-SE-FGHD---------------VNRADPVEPGLNMYREKRRVRQLVEE----------SGIPFTYICCN  160 (346)
T ss_dssp             --CCCSEEEC-SC-CSSC---------------TTTCCCCTTHHHHHHHHHHHHHHHHH----------TTCCBEEEECC
T ss_pred             --CCceEEee-cc-cCCC---------------CCccCcCCCcchHHHHHHHHHHHHHH----------cCCCEEEEEec
Confidence              11246664 33 2210               11122345567899999998877753          36788889999


Q ss_pred             cccCCccCcchhHHHHH-H------HHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          171 VVKTNIMREVPSFLSLM-A------FTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       171 ~v~T~~~~~~~~~~~~~-~------~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      ++.+.+........... .      .........+.+++++|+.++.++..++..++.++..+.|+.+.
T Consensus       161 ~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~g~~~~~s  229 (346)
T 3i6i_A          161 SIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLN  229 (346)
T ss_dssp             EESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEEC
T ss_pred             ccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCccccCeEEEEeCCCCCCC
Confidence            98776544322110000 0      00000011356899999999977665543344455432345443

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=98.33  E-value=5.7e-07  Score=80.97  Aligned_cols=168  Identities=10%  Similarity=0.010  Sum_probs=98.4

Q ss_pred             CCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccC
Q 024553           43 HSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGK  122 (266)
Q Consensus        43 ~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  122 (266)
                      ...+|+|||+||..... ..+.+..+..+++|+.++..+++.+.   +..+ .+++|++||...+.....        +.
T Consensus       199 l~~~D~Vih~A~~~~~~-~~~~~~~~~~~~~Nv~gt~~ll~a~a---~~~~-~~r~V~~SS~~vyg~~~~--------~~  265 (516)
T 3oh8_A          199 LDGADVLVHLAGEPIFG-RFNDSHKEAIRESRVLPTKFLAELVA---ESTQ-CTTMISASAVGFYGHDRG--------DE  265 (516)
T ss_dssp             TTTCSEEEECCCC------CCGGGHHHHHHHTHHHHHHHHHHHH---HCSS-CCEEEEEEEGGGGCSEEE--------EE
T ss_pred             cCCCCEEEECCCCcccc-ccchhHHHHHHHHHHHHHHHHHHHHH---hcCC-CCEEEEeCcceEecCCCC--------CC
Confidence            45799999999985322 34556678899999999999999743   2233 579999999776531100        00


Q ss_pred             cccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcccCCccCcchhHHHHHHHHHHHHh------h
Q 024553          123 FFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL------G  196 (266)
Q Consensus       123 ~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~------~  196 (266)
                      ...+..+. +...|+.+|...+.+...    ..   ..++.++.+.||.+.++...................+      .
T Consensus       266 ~~~E~~~~-~~~~y~~~~~~~E~~~~~----~~---~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~g~~~~~g~g~~~~  337 (516)
T 3oh8_A          266 ILTEESES-GDDFLAEVCRDWEHATAP----AS---DAGKRVAFIRTGVALSGRGGMLPLLKTLFSTGLGGKFGDGTSWF  337 (516)
T ss_dssp             EECTTSCC-CSSHHHHHHHHHHHTTHH----HH---HTTCEEEEEEECEEEBTTBSHHHHHHHTTC---CCCCTTSCCEE
T ss_pred             ccCCCCCC-CcChHHHHHHHHHHHHHH----HH---hCCCCEEEEEeeEEECCCCChHHHHHHHHHhCCCcccCCCCceE
Confidence            11112222 445678888877665432    22   4689999999999988763211111000000000001      1


Q ss_pred             cCCCHHHHHHHHHHHhcCCCCcccceeecCCCccccC
Q 024553          197 LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNS  233 (266)
Q Consensus       197 ~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~~  233 (266)
                      .+..++++|++++.++..+. ..|.|.. ++++.+.+
T Consensus       338 ~~i~v~Dva~ai~~~l~~~~-~~g~~ni-~~~~~~s~  372 (516)
T 3oh8_A          338 SWIAIDDLTDIYYRAIVDAQ-ISGPINA-VAPNPVSN  372 (516)
T ss_dssp             CEEEHHHHHHHHHHHHHCTT-CCEEEEE-SCSCCEEH
T ss_pred             ceEeHHHHHHHHHHHHhCcc-cCCcEEE-ECCCCCCH
Confidence            24578999999997665543 4566544 55555543

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=98.12  E-value=1.7e-06  Score=72.21  Aligned_cols=151  Identities=13%  Similarity=0.098  Sum_probs=85.7

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      .+.++.+|+++.+++.+++             ..+|+|||+||...                 +.+...+++++    ++
T Consensus        56 ~v~~v~~D~~d~~~l~~~~-------------~~~d~vi~~a~~~~-----------------~~~~~~l~~aa----~~  101 (307)
T 2gas_A           56 GVILLEGDINDHETLVKAI-------------KQVDIVICAAGRLL-----------------IEDQVKIIKAI----KE  101 (307)
T ss_dssp             TCEEEECCTTCHHHHHHHH-------------TTCSEEEECSSSSC-----------------GGGHHHHHHHH----HH
T ss_pred             CCEEEEeCCCCHHHHHHHH-------------hCCCEEEECCcccc-----------------cccHHHHHHHH----Hh
Confidence            4789999999998887665             25899999999742                 23444444444    33


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCc
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV  171 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~  171 (266)
                      .+.-.++|  .|..+...     +.         .....+....| .+|.+++.+++    +      .++.++.+.||+
T Consensus       102 ~g~v~~~v--~S~~g~~~-----~~---------~~~~~p~~~~y-~sK~~~e~~~~----~------~~i~~~~lrp~~  154 (307)
T 2gas_A          102 AGNVKKFF--PSEFGLDV-----DR---------HDAVEPVRQVF-EEKASIRRVIE----A------EGVPYTYLCCHA  154 (307)
T ss_dssp             HCCCSEEE--CSCCSSCT-----TS---------CCCCTTHHHHH-HHHHHHHHHHH----H------HTCCBEEEECCE
T ss_pred             cCCceEEe--ecccccCc-----cc---------ccCCCcchhHH-HHHHHHHHHHH----H------cCCCeEEEEcce
Confidence            22135776  34332110     00         01123345678 99999887764    2      356788889999


Q ss_pred             ccCCccCcchhHH-------HHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccc-eee
Q 024553          172 VKTNIMREVPSFL-------SLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGV-YFF  224 (266)
Q Consensus       172 v~T~~~~~~~~~~-------~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~-~~~  224 (266)
                      +.+++........       .............+.+++++|+.++.++..+. ..|+ ++.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-~~~~~~~~  214 (307)
T 2gas_A          155 FTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPN-TLNKAVHI  214 (307)
T ss_dssp             ETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGG-GTTEEEEC
T ss_pred             eeccccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCcc-ccCceEEE
Confidence            8876543321100       00000000001134589999999997765543 3344 444

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=98.03  E-value=2.7e-06  Score=71.17  Aligned_cols=164  Identities=7%  Similarity=0.043  Sum_probs=89.2

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      .+.++.+|+++.+++.+++             ..+|+|||++|.....             .|+.++..+++.+    ++
T Consensus        56 ~~~~~~~D~~d~~~l~~~~-------------~~~d~vi~~a~~~~~~-------------~~~~~~~~l~~aa----~~  105 (313)
T 1qyd_A           56 GAKLIEASLDDHQRLVDAL-------------KQVDVVISALAGGVLS-------------HHILEQLKLVEAI----KE  105 (313)
T ss_dssp             TCEEECCCSSCHHHHHHHH-------------TTCSEEEECCCCSSSS-------------TTTTTHHHHHHHH----HH
T ss_pred             CeEEEeCCCCCHHHHHHHH-------------hCCCEEEECCccccch-------------hhHHHHHHHHHHH----Hh
Confidence            5789999999998887665             2589999999975321             2566666666555    33


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCc
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV  171 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~  171 (266)
                      .+.-+++|+  |..+...  ..+           .....+....| .+|.+.+.+++    +      .++.++.+.||+
T Consensus       106 ~g~v~~~v~--S~~g~~~--~~~-----------~~~~~p~~~~y-~sK~~~e~~~~----~------~g~~~~ilrp~~  159 (313)
T 1qyd_A          106 AGNIKRFLP--SEFGMDP--DIM-----------EHALQPGSITF-IDKRKVRRAIE----A------ASIPYTYVSSNM  159 (313)
T ss_dssp             SCCCSEEEC--SCCSSCT--TSC-----------CCCCSSTTHHH-HHHHHHHHHHH----H------TTCCBCEEECCE
T ss_pred             cCCCceEEe--cCCcCCc--ccc-----------ccCCCCCcchH-HHHHHHHHHHH----h------cCCCeEEEEece
Confidence            321357774  3332110  000           01112334568 99999887764    2      356677788988


Q ss_pred             ccCCccCcchhH-------H-HHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCccc
Q 024553          172 VKTNIMREVPSF-------L-SLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  231 (266)
Q Consensus       172 v~T~~~~~~~~~-------~-~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~  231 (266)
                      +.+++...+...       . .............+.+++++|+.++.++..+...++.++..+.++.+
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~  227 (313)
T 1qyd_A          160 FAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNIL  227 (313)
T ss_dssp             EHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEE
T ss_pred             eccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcccCCceEEEeCCCCcc
Confidence            855432221110       0 00000000001134589999999997665443233334443333433

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=97.85  E-value=0.00012  Score=62.43  Aligned_cols=155  Identities=12%  Similarity=-0.087  Sum_probs=89.5

Q ss_pred             cEEEEEec-CCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           12 RLEAFQVD-LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        12 ~~~~i~~D-ls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .+.++.+| +++.+++.+++             ..+|++|||++...             ...|..+ ..+++.+    +
T Consensus        52 ~v~~v~~D~l~d~~~l~~~~-------------~~~d~Vi~~a~~~~-------------~~~~~~~-~~l~~aa----~  100 (352)
T 1xgk_A           52 NVTLFQGPLLNNVPLMDTLF-------------EGAHLAFINTTSQA-------------GDEIAIG-KDLADAA----K  100 (352)
T ss_dssp             TEEEEESCCTTCHHHHHHHH-------------TTCSEEEECCCSTT-------------SCHHHHH-HHHHHHH----H
T ss_pred             CcEEEECCccCCHHHHHHHH-------------hcCCEEEEcCCCCC-------------cHHHHHH-HHHHHHH----H
Confidence            57889999 99999887765             25799999997631             1234444 4444443    4


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                      +.+..++||++||.....                   ........|..+|.+.+.+++.          .+++++.+.||
T Consensus       101 ~~g~v~~~V~~SS~~~~~-------------------~~~~~~~~y~~sK~~~E~~~~~----------~gi~~~ivrpg  151 (352)
T 1xgk_A          101 RAGTIQHYIYSSMPDHSL-------------------YGPWPAVPMWAPKFTVENYVRQ----------LGLPSTFVYAG  151 (352)
T ss_dssp             HHSCCSEEEEEECCCGGG-------------------TSSCCCCTTTHHHHHHHHHHHT----------SSSCEEEEEEC
T ss_pred             HcCCccEEEEeCCccccc-------------------cCCCCCccHHHHHHHHHHHHHH----------cCCCEEEEecc
Confidence            321136999999976210                   0112235699999999988853          36788888899


Q ss_pred             cccCCccCcchhH------HHHHH----HHHHHHhhcCCCH-HHHHHHHHHHhcCCC-CcccceeecC
Q 024553          171 VVKTNIMREVPSF------LSLMA----FTVLKLLGLLQSP-EKGINSVLDAALAPP-ETSGVYFFGG  226 (266)
Q Consensus       171 ~v~T~~~~~~~~~------~~~~~----~~~~~~~~~~~~p-~~~a~~~~~~~~~~~-~~~G~~~~~~  226 (266)
                      ++-++......+.      .....    .........+.++ +++|+.++.++..++ ...|..|...
T Consensus       152 ~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~  219 (352)
T 1xgk_A          152 IYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALT  219 (352)
T ss_dssp             EEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEEC
T ss_pred             eecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCCeEEEEe
Confidence            8754433221000      00000    0000000123467 899999997776542 2245555444

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=97.66  E-value=8.9e-05  Score=61.48  Aligned_cols=170  Identities=14%  Similarity=-0.010  Sum_probs=92.4

Q ss_pred             CCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCcccc
Q 024553           42 MHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETI  119 (266)
Q Consensus        42 ~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  119 (266)
                      ....+|++||.||..  .+....+.+..+..+..|+.++..+.+.+...-  .+ ..++|+.||...+........    
T Consensus        48 ~l~~~d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~--~~-~~~~i~~Ss~~vyg~~~~~~~----  120 (298)
T 4b4o_A           48 GLPSCDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAP--QP-PKAWVLVTGVAYYQPSLTAEY----  120 (298)
T ss_dssp             CCCSCSEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCS--SC-CSEEEEEEEGGGSCCCSSCCB----
T ss_pred             hccCCCEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhC--CC-ceEEEEEeeeeeecCCCCCcc----
Confidence            456899999999853  222333444556778888888877776653321  11 446788888776543221111    


Q ss_pred             ccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcccCCccCcchhHHHHHHHHHHHHhh---
Q 024553          120 TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG---  196 (266)
Q Consensus       120 ~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~---  196 (266)
                           .+..+......|+..+...+..     ....   ..++++..+.||.|..+...................++   
T Consensus       121 -----~E~~p~~~~~~~~~~~~~~e~~-----~~~~---~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~g~g~  187 (298)
T 4b4o_A          121 -----DEDSPGGDFDFFSNLVTKWEAA-----ARLP---GDSTRQVVVRSGVVLGRGGGAMGHMLLPFRLGLGGPIGSGH  187 (298)
T ss_dssp             -----CTTCCCSCSSHHHHHHHHHHHH-----HCCS---SSSSEEEEEEECEEECTTSHHHHHHHHHHHTTCCCCBTTSC
T ss_pred             -----cccCCccccchhHHHHHHHHHH-----HHhh---ccCCceeeeeeeeEEcCCCCchhHHHHHHhcCCcceecccC
Confidence                 1122333334455444444332     1222   67899999999999876532211111110000000011   


Q ss_pred             ---cCCCHHHHHHHHHHHhcCCCCcccceeecCCCccccC
Q 024553          197 ---LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNS  233 (266)
Q Consensus       197 ---~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~~  233 (266)
                         .+...+|++++++.++..+ ...|.| +.++++++..
T Consensus       188 ~~~~~ihv~Dva~a~~~~~~~~-~~~g~y-n~~~~~~~t~  225 (298)
T 4b4o_A          188 QFFPWIHIGDLAGILTHALEAN-HVHGVL-NGVAPSSATN  225 (298)
T ss_dssp             SBCCEEEHHHHHHHHHHHHHCT-TCCEEE-EESCSCCCBH
T ss_pred             ceeecCcHHHHHHHHHHHHhCC-CCCCeE-EEECCCccCH
Confidence               1346899999998655544 456655 4456666543

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=97.65  E-value=4e-06  Score=70.44  Aligned_cols=158  Identities=6%  Similarity=0.021  Sum_probs=83.8

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      .+.++.+|+++.+++.+++             ..+|+|||+||...                 +.+...+++.+    ++
T Consensus        57 ~v~~v~~D~~d~~~l~~a~-------------~~~d~vi~~a~~~~-----------------~~~~~~l~~aa----~~  102 (321)
T 3c1o_A           57 GVTIIEGEMEEHEKMVSVL-------------KQVDIVISALPFPM-----------------ISSQIHIINAI----KA  102 (321)
T ss_dssp             TCEEEECCTTCHHHHHHHH-------------TTCSEEEECCCGGG-----------------SGGGHHHHHHH----HH
T ss_pred             CcEEEEecCCCHHHHHHHH-------------cCCCEEEECCCccc-----------------hhhHHHHHHHH----HH
Confidence            5789999999998887766             25899999999732                 23333444444    33


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCc
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV  171 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~  171 (266)
                      .+.-+++|  .|..+...       +.       .....+....| .+|.+++.+++.          .++.++.+.||+
T Consensus       103 ~g~v~~~v--~S~~g~~~-------~~-------~~~~~p~~~~y-~sK~~~e~~~~~----------~~~~~~~lrp~~  155 (321)
T 3c1o_A          103 AGNIKRFL--PSDFGCEE-------DR-------IKPLPPFESVL-EKKRIIRRAIEA----------AALPYTYVSANC  155 (321)
T ss_dssp             HCCCCEEE--CSCCSSCG-------GG-------CCCCHHHHHHH-HHHHHHHHHHHH----------HTCCBEEEECCE
T ss_pred             hCCccEEe--ccccccCc-------cc-------cccCCCcchHH-HHHHHHHHHHHH----------cCCCeEEEEece
Confidence            22124776  34332100       00       01112224678 999999887752          245566678988


Q ss_pred             ccCCccCcchh-------HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccc-eeecCCCccc
Q 024553          172 VKTNIMREVPS-------FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGV-YFFGGKGRTV  231 (266)
Q Consensus       172 v~T~~~~~~~~-------~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~-~~~~~~g~~~  231 (266)
                      +.+++...+..       ...............+.+++++|+.++.++..+. ..|. ++..+.|+.+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-~~g~~~~~~g~~~~~  222 (321)
T 3c1o_A          156 FGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPR-CCNRIVIYRPPKNII  222 (321)
T ss_dssp             EHHHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGG-GTTEEEECCCGGGEE
T ss_pred             eccccccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCcc-ccCeEEEEeCCCCcc
Confidence            75432210000       0000000000001134589999999997766543 3355 4442224443

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=97.58  E-value=9.1e-06  Score=67.72  Aligned_cols=153  Identities=10%  Similarity=0.081  Sum_probs=80.8

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      ..+.++.+|+++.+++.++++             .+|+|||+||...                 +.+...+++.+    +
T Consensus        56 ~~v~~v~~D~~d~~~l~~~~~-------------~~d~vi~~a~~~~-----------------~~~~~~l~~aa----~  101 (308)
T 1qyc_A           56 SGANIVHGSIDDHASLVEAVK-------------NVDVVISTVGSLQ-----------------IESQVNIIKAI----K  101 (308)
T ss_dssp             TTCEEECCCTTCHHHHHHHHH-------------TCSEEEECCCGGG-----------------SGGGHHHHHHH----H
T ss_pred             CCCEEEEeccCCHHHHHHHHc-------------CCCEEEECCcchh-----------------hhhHHHHHHHH----H
Confidence            357899999999988876652             4899999998631                 22333444444    3


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                      +.+.-+++|.  |..+..     .+.         .....+....| .+|.+++.+++.          .++.++.+.||
T Consensus       102 ~~g~v~~~v~--S~~g~~-----~~~---------~~~~~p~~~~y-~sK~~~e~~~~~----------~~~~~~~~r~~  154 (308)
T 1qyc_A          102 EVGTVKRFFP--SEFGND-----VDN---------VHAVEPAKSVF-EVKAKVRRAIEA----------EGIPYTYVSSN  154 (308)
T ss_dssp             HHCCCSEEEC--SCCSSC-----TTS---------CCCCTTHHHHH-HHHHHHHHHHHH----------HTCCBEEEECC
T ss_pred             hcCCCceEee--cccccC-----ccc---------cccCCcchhHH-HHHHHHHHHHHh----------cCCCeEEEEec
Confidence            3221357763  333211     000         01122335678 999998877643          24566677898


Q ss_pred             cccCCccCcchhH-------HHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceee
Q 024553          171 VVKTNIMREVPSF-------LSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFF  224 (266)
Q Consensus       171 ~v~T~~~~~~~~~-------~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~  224 (266)
                      ++.+++.......       ..............+.+++++|+.++.++..+...++.++.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~  215 (308)
T 1qyc_A          155 CFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYL  215 (308)
T ss_dssp             EEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEEC
T ss_pred             eeccccccccccccccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCccccCeEEEE
Confidence            8755432221100       00000000000112458899999999655443222333444

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=97.53  E-value=6.2e-06  Score=69.23  Aligned_cols=159  Identities=8%  Similarity=0.026  Sum_probs=82.4

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      .+.++.+|+++.+++.+++             ..+|+|||+||...                 +.+...+++.+    ++
T Consensus        59 ~v~~v~~Dl~d~~~l~~a~-------------~~~d~vi~~a~~~~-----------------~~~~~~l~~aa----~~  104 (318)
T 2r6j_A           59 GAIIVKGELDEHEKLVELM-------------KKVDVVISALAFPQ-----------------ILDQFKILEAI----KV  104 (318)
T ss_dssp             TCEEEECCTTCHHHHHHHH-------------TTCSEEEECCCGGG-----------------STTHHHHHHHH----HH
T ss_pred             CCEEEEecCCCHHHHHHHH-------------cCCCEEEECCchhh-----------------hHHHHHHHHHH----Hh
Confidence            4789999999998887766             25899999998631                 22333444443    43


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCc
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV  171 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~  171 (266)
                      .+.-+++|+  |..+...     +.         .....+....| .+|.+++.+++.          .++.++.+.||+
T Consensus       105 ~g~v~~~v~--S~~g~~~-----~~---------~~~~~p~~~~y-~sK~~~e~~~~~----------~~~~~~~lr~~~  157 (318)
T 2r6j_A          105 AGNIKRFLP--SDFGVEE-----DR---------INALPPFEALI-ERKRMIRRAIEE----------ANIPYTYVSANC  157 (318)
T ss_dssp             HCCCCEEEC--SCCSSCT-----TT---------CCCCHHHHHHH-HHHHHHHHHHHH----------TTCCBEEEECCE
T ss_pred             cCCCCEEEe--eccccCc-----cc---------ccCCCCcchhH-HHHHHHHHHHHh----------cCCCeEEEEcce
Confidence            221347763  3332100     00         00111224568 999988877642          356677788887


Q ss_pred             ccCCccCcchhH----HHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCccc
Q 024553          172 VKTNIMREVPSF----LSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  231 (266)
Q Consensus       172 v~T~~~~~~~~~----~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~  231 (266)
                      +...+.......    ..............+.+++++|+.++.++..++..++.++..+.|+.+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~  221 (318)
T 2r6j_A          158 FASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNII  221 (318)
T ss_dssp             EHHHHHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEE
T ss_pred             ehhhhhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccccCeEEEecCCCCcc
Confidence            743321100000    000000000001124589999999997665543333334443334433

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=97.13  E-value=0.0004  Score=52.04  Aligned_cols=40  Identities=15%  Similarity=0.163  Sum_probs=35.9

Q ss_pred             CccEEEEEecCCCH--HHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC
Q 024553           10 DARLEAFQVDLSSF--QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL   56 (266)
Q Consensus        10 ~~~~~~i~~Dls~~--~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~   56 (266)
                      +.++..+++|++++  ++++++++.+.+      .+++ |+||||||+.
T Consensus        67 G~~~~~i~~Dv~~~~~~~v~~~~~~i~~------~~G~-dVLVnnAgg~  108 (157)
T 3gxh_A           67 GMDYVYIPVDWQNPKVEDVEAFFAAMDQ------HKGK-DVLVHCLANY  108 (157)
T ss_dssp             TCEEEECCCCTTSCCHHHHHHHHHHHHH------TTTS-CEEEECSBSH
T ss_pred             CCeEEEecCCCCCCCHHHHHHHHHHHHh------cCCC-CEEEECCCCC
Confidence            55788999999999  999999999988      6788 9999999973

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=96.36  E-value=0.0026  Score=53.50  Aligned_cols=107  Identities=7%  Similarity=-0.026  Sum_probs=69.0

Q ss_pred             CCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCc
Q 024553           44 SSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKF  123 (266)
Q Consensus        44 ~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  123 (266)
                      ...|+|||.||.....    .+..++.+++|+.++..+++.+...-  .. ..+++++|+......   .+.        
T Consensus        79 ~~~D~Vih~Ag~~~~~----~~~~~~~~~~Nv~~t~~l~~a~~~~~--~~-~~~vvv~snp~~~~~---~~~--------  140 (327)
T 1y7t_A           79 KDADYALLVGAAPRKA----GMERRDLLQVNGKIFTEQGRALAEVA--KK-DVKVLVVGNPANTNA---LIA--------  140 (327)
T ss_dssp             TTCSEEEECCCCCCCT----TCCHHHHHHHHHHHHHHHHHHHHHHS--CT-TCEEEECSSSHHHHH---HHH--------
T ss_pred             CCCCEEEECCCcCCCC----CCCHHHHHHHHHHHHHHHHHHHHhhc--CC-CeEEEEeCCchhhhH---HHH--------
Confidence            4689999999986422    23456789999999999998886541  12 468888888652110   000        


Q ss_pred             ccCCC-CCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeE-EEEecCC
Q 024553          124 FLRSK-CYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVS-VIAADPG  170 (266)
Q Consensus       124 ~~~~~-~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~-v~~v~PG  170 (266)
                       .+.. ++++...|+.+|...+.+...+++.+... ...++ ++.+-|+
T Consensus       141 -~~~~~~~~p~~~yg~tkl~~er~~~~~a~~~g~~-~~~vr~~~V~G~h  187 (327)
T 1y7t_A          141 -YKNAPGLNPRNFTAMTRLDHNRAKAQLAKKTGTG-VDRIRRMTVWGNH  187 (327)
T ss_dssp             -HHTCTTSCGGGEEECCHHHHHHHHHHHHHHHTCC-GGGEECCEEEBCS
T ss_pred             -HHHcCCCChhheeccchHHHHHHHHHHHHHhCcC-hhheeeeEEEcCC
Confidence             0011 34555679999999999998888876421 23344 3445554

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=91.58  E-value=0.041  Score=45.16  Aligned_cols=54  Identities=6%  Similarity=0.003  Sum_probs=39.2

Q ss_pred             EEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC---CCCcCCC-cccchhhhhhhhhHH
Q 024553           13 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA---TSSRLTP-EGYDQMMSTNYIGAF   79 (266)
Q Consensus        13 ~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~---~~~~~~~-~~~~~~~~~n~~~~~   79 (266)
                      +.++.+|+++.+++.+++             ..+|+||||||...   +..+.+. +.++..+++|+.+.+
T Consensus       169 ~~~~~~D~~~~~~~~~~~-------------~~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          169 VNVTAAETADDASRAEAV-------------KGAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             CCCEEEECCSHHHHHHHT-------------TTCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             cEEEEecCCCHHHHHHHH-------------HhCCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence            567788998888765544             24799999998642   2223444 788899999999887

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	266
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	1e-19
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	1e-18
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	6e-15
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	5e-13
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	2e-11
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	6e-11
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	8e-11
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	1e-10
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	2e-10
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	2e-10
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	2e-10
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	4e-10
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	9e-10
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	2e-09
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	9e-09
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	3e-08
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	2e-07
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	2e-07
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	3e-07
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	6e-07
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	5e-06
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	8e-06
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	1e-05
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	1e-05
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	2e-05
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	6e-05
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	3e-04
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	6e-04
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	6e-04
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	9e-04
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	0.004

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.4 bits (205), Expect = 1e-19
 Identities = 48/245 (19%), Positives = 88/245 (35%), Gaps = 46/245 (18%)

Query: 7   RNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTP 64
           + +       Q+D+   QS+   +D L++       +  + +L+NNAGI    +      
Sbjct: 49  QAEGLSPRFHQLDIDDLQSIRALRDFLRKE------YGGLDVLVNNAGIAFKVADPTPFH 102

Query: 65  EGYDQMMSTNYIGAFFLTKLLLPLLKNS---PVPSRIVNVTSFTHRNVFNAQ-------- 113
              +  M TN+ G   +   LLPL+K        S I++V +    +    Q        
Sbjct: 103 IQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETIT 162

Query: 114 -------VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLD-KSRHVSVI 165
                  +N      K  +  K    +  Y  +K+ + + S    R L    K   + + 
Sbjct: 163 EEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLN 222

Query: 166 AADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGV---Y 222
           A  PG V+T++                      +SPE+G  + +  AL PP+  G    +
Sbjct: 223 ACCPGWVRTDMAGPKA----------------TKSPEEGAETPVYLALLPPDAEGPHGQF 266

Query: 223 FFGGK 227
               +
Sbjct: 267 VSEKR 271

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 80.7 bits (198), Expect = 1e-18
 Identities = 43/219 (19%), Positives = 79/219 (36%), Gaps = 30/219 (13%)

Query: 9   KDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPE 65
           KD+R+    + ++  +S+    D+    + +      + LLINNAG+L +          
Sbjct: 49  KDSRVHVLPLTVTCDKSL----DTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRA 104

Query: 66  GYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFL 125
              + +  N      LT+ LLPLLKN+       +  S +   V        +IT     
Sbjct: 105 VIAEQLDVNTTSVVLLTQKLLPLLKNAA-SKESGDQLSVSRAAVITISSGLGSITDNT-- 161

Query: 126 RSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS 185
                     Y  SK  + +F   L  +L      +V V+   PG V+TN+  +  +   
Sbjct: 162 SGSAQFPVLAYRMSKAAINMFGRTLAVDLK---DDNVLVVNFCPGWVQTNLGGKNAAL-- 216

Query: 186 LMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYF 223
                         + E+    ++ +        +G +F
Sbjct: 217 --------------TVEQSTAELISSFNKLDNSHNGRFF 241

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.3 bits (172), Expect = 6e-15
 Identities = 32/183 (17%), Positives = 65/183 (35%), Gaps = 28/183 (15%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS- 60
           A+  S      L  ++ DLS+ + +L    +++        HS + + INNAG+    + 
Sbjct: 52  AECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ------HSGVDICINNAGLARPDTL 105

Query: 61  -RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPS-RIVNVTSFTHRNVFNAQVNNET 118
              +  G+  M + N +     T+     +K   V    I+N+ S +   V    V +  
Sbjct: 106 LSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFY 165

Query: 119 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMR 178
              K+ + +      +    ++                    H+      PGVV+T    
Sbjct: 166 SATKYAVTALTEGLRQELREAQ-------------------THIRATCISPGVVETQFAF 206

Query: 179 EVP 181
           ++ 
Sbjct: 207 KLH 209

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.6 bits (157), Expect = 5e-13
 Identities = 36/213 (16%), Positives = 65/213 (30%), Gaps = 40/213 (18%)

Query: 7   RNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNA--GILATSSRLTP 64
           +   A++  F VD S+ + +      ++  + D  +      L+NNA     +       
Sbjct: 52  KGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSI------LVNNAGVVYTSDLFATQD 105

Query: 65  EGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFF 124
              ++    N +  F+ TK  LP +  +     IV V S          +          
Sbjct: 106 PQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVSVPFLLA--------- 155

Query: 125 LRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL 184
                      Y  SK   + F   L   L   +   V      P  V T  ++   +  
Sbjct: 156 -----------YCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPSTS- 203

Query: 185 SLMAFTVLKLLGLLQSPEKGINSVLDAALAPPE 217
                     LG    PE+ +N ++   L   +
Sbjct: 204 ----------LGPTLEPEEVVNRLMHGILTEQK 226

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 60.4 bits (146), Expect = 2e-11
 Identities = 47/213 (22%), Positives = 78/213 (36%), Gaps = 41/213 (19%)

Query: 4   ITSRNKDA------------RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLIN 51
           IT R+ D             +++ FQ D S      K  D+ +           +  L+N
Sbjct: 35  ITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATE------KAFGPVSTLVN 88

Query: 52  NAGILATSS--RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV 109
           NAGI    S    T   + ++++ N  G FF T+L +  +KN  + + I+N++S      
Sbjct: 89  NAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVG 148

Query: 110 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP 169
                                P    Y  SK  + I S     +  L K   V V    P
Sbjct: 149 D--------------------PSLGAYNASKGAVRIMSKSAALDCAL-KDYDVRVNTVHP 187

Query: 170 GVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPE 202
           G +KT ++ ++P     M+      +G +  P 
Sbjct: 188 GYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPN 220

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 58.7 bits (142), Expect = 6e-11
 Identities = 33/185 (17%), Positives = 57/185 (30%), Gaps = 39/185 (21%)

Query: 4   ITSRNKDAR-------LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL 56
           +     + +          FQVDL   +  ++F +              + +L+NNA I 
Sbjct: 34  LCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAA------YALGRVDVLVNNAAIA 87

Query: 57  ATSS--RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV 114
           A  S   +    + +++  N      L+ L    ++       IVNV S           
Sbjct: 88  APGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGG-AIVNVASVQGL------- 139

Query: 115 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKT 174
                                Y  SK  L+  +  L  +L       + V A  PG + T
Sbjct: 140 -------------FAEQENAAYNASKGGLVNLTRSLALDLA---PLRIRVNAVAPGAIAT 183

Query: 175 NIMRE 179
             + E
Sbjct: 184 EAVLE 188

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 58.5 bits (141), Expect = 8e-11
 Identities = 37/178 (20%), Positives = 66/178 (37%), Gaps = 31/178 (17%)

Query: 7   RNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTP 64
           R+K  ++EA   DLSS     +  +++      +  H  + +L+NNAGI+        T 
Sbjct: 53  RSKGFKVEASVCDLSSRSERQELMNTVA-----NHFHGKLNILVNNAGIVIYKEAKDYTV 107

Query: 65  EGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFF 124
           E Y  +MS N+  A+ L+ L  P LK S   + +   +                      
Sbjct: 108 EDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL----------------- 150

Query: 125 LRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS 182
                 P   +Y  +K  +   +  L          ++ V    PGV+ T+++     
Sbjct: 151 ----AVPYEAVYGATKGAMDQLTRCLAFEWA---KDNIRVNGVGPGVIATSLVEMTIQ 201

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 57.7 bits (139), Expect = 1e-10
 Identities = 36/205 (17%), Positives = 67/205 (32%), Gaps = 39/205 (19%)

Query: 2   ADITSRNKDARLEAFQVDLS-SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS 60
           A++ + N    +     D++       K    +   L   D+       IN AGIL    
Sbjct: 46  AELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTVDIL------INGAGIL---- 95

Query: 61  RLTPEGYDQMMSTNYIGAFFLTKLLLPLL--KNSPVPSRIVNVTSFTHRNVFNAQVNNET 118
                  ++ ++ N+ G    T  +L     +       I N+ S T  N          
Sbjct: 96  --DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN---------- 143

Query: 119 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMR 178
                           +Y  SK  ++ F+  L +         V+  + +PG+ +T ++ 
Sbjct: 144 ----------AIHQVPVYSASKAAVVSFTNSLAKLAP---ITGVTAYSINPGITRTPLVH 190

Query: 179 EVPSFLSLMAFTVLKLLG-LLQSPE 202
              S+L +       LL    Q+ E
Sbjct: 191 TFNSWLDVEPRVAELLLSHPTQTSE 215

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 57.7 bits (139), Expect = 2e-10
 Identities = 28/188 (14%), Positives = 58/188 (30%), Gaps = 41/188 (21%)

Query: 4   ITSRNKDA----------RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNA 53
            +  N+ A          R    + D+SS         ++Q+         ++ +L+NNA
Sbjct: 35  FSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRR------LGTLNVLVNNA 88

Query: 54  GIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN 111
           GIL          E + +++  N    F   +  +  +K       I+N+ S +      
Sbjct: 89  GILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKE--TGGSIINMASVSSWL--- 143

Query: 112 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV 171
                                   Y  SK  +   +     +    +   + V +  P  
Sbjct: 144 -----------------PIEQYAGYSASKAAVSALTRAAALSCR-KQGYAIRVNSIHPDG 185

Query: 172 VKTNIMRE 179
           + T +M+ 
Sbjct: 186 IYTPMMQA 193

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 57.6 bits (139), Expect = 2e-10
 Identities = 46/223 (20%), Positives = 76/223 (34%), Gaps = 35/223 (15%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS- 60
           A+   RN   R+   + D+S    V  F   +              +L+NNAGI      
Sbjct: 43  AEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVIST------FGRCDILVNNAGIYPLIPF 96

Query: 61  -RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETI 119
             LT E + +    N    F + K  +P +K +    RI+N+TS T+             
Sbjct: 97  DELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWLKI--------- 146

Query: 120 TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE 179
                           Y  +K   + F+  L  +LG      ++V A  P +V+T     
Sbjct: 147 -----------EAYTHYISTKAANIGFTRALASDLG---KDGITVNAIAPSLVRTATTEA 192

Query: 180 VPSFLSLMAF-TVLKLLGLLQSPEKGINSVLDAALAPPETSGV 221
                       +L+ +  LQ P     +     LA  + S +
Sbjct: 193 SALSAMFDVLPNMLQAIPRLQVPLDLTGAAA--FLASDDASFI 233

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.3 bits (138), Expect = 2e-10
 Identities = 37/216 (17%), Positives = 69/216 (31%), Gaps = 48/216 (22%)

Query: 4   ITSRNKDA---------RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG 54
           I  +++                  D++    V        +     D        +NNAG
Sbjct: 35  ICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV------VNNAG 88

Query: 55  ILATSSRL---TPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN 111
                 R    + +G+ Q++  N +G + LTKL LP L+ S     ++N++S        
Sbjct: 89  HHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ--GNVINISSLVGAIGQA 146

Query: 112 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV 171
             V                     Y  +K  +   +  L  +        V V    PG 
Sbjct: 147 QAVP--------------------YVATKGAVTAMTKALALDES---PYGVRVNCISPGN 183

Query: 172 VKTNIMREVPSFL-----SLMAFTVLKLLGLLQSPE 202
           + T +  E+ + +     S+    + + LG +  P 
Sbjct: 184 IWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPA 219

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 56.5 bits (136), Expect = 4e-10
 Identities = 25/178 (14%), Positives = 55/178 (30%), Gaps = 36/178 (20%)

Query: 9   KDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI------LATSSRL 62
            +  + +   D+++     +   +             + +L+NNAG         T +  
Sbjct: 55  SEQNVNSVVADVTTDAGQDEILSTTLGK------FGKLDILVNNAGAAIPDSQSKTGTAQ 108

Query: 63  TPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGK 122
           + E YD  ++ N      LTK  +P L ++      ++  +                   
Sbjct: 109 SIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLH--------------- 153

Query: 123 FFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV 180
                   P    Y  +K  +  ++     +L       + V +  PG+V T     +
Sbjct: 154 ------ATPDFPYYSIAKAAIDQYTRNTAIDLI---QHGIRVNSISPGLVATGFGSAM 202

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.4 bits (133), Expect = 9e-10
 Identities = 33/213 (15%), Positives = 65/213 (30%), Gaps = 35/213 (16%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSR 61
           A +  + +  +    Q D++  Q +      +            + +L+NNAG+      
Sbjct: 45  AALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH------FGRLDILVNNAGVN----- 93

Query: 62  LTPEGYDQMMSTNYIGAFFLTKLLLPLLK--NSPVPSRIVNVTSFTHRNVFNAQVNNETI 119
              + +++ +  N +     T L L  +   N      I+N++S         Q      
Sbjct: 94  -NEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVY--- 149

Query: 120 TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE 179
                    C     I  +++   L  +  L           V + A  PG V T I+  
Sbjct: 150 ---------CASKHGIVGFTRSAAL--AANLMN-------SGVRLNAICPGFVNTAILES 191

Query: 180 VPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAA 212
           +    ++  +   K          GI      A
Sbjct: 192 IEKEENMGQYIEYKDHIKDMIKYYGILDPPLIA 224

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.6 bits (131), Expect = 2e-09
 Identities = 42/230 (18%), Positives = 80/230 (34%), Gaps = 47/230 (20%)

Query: 4   ITSRNKDA---------RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG 54
             SR +            +E   VDL  +++  +   S+            + LL+NNA 
Sbjct: 36  AVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVG----------PVDLLVNNAA 85

Query: 55  ILATSS--RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA 112
           +        +T E +D+    N      +++++   L    VP  IVNV+S   +     
Sbjct: 86  VALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQ----- 140

Query: 113 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVV 172
                          +      +Y  +K  L + +  +   LG      + V A +P VV
Sbjct: 141 ---------------RAVTNHSVYCSTKGALDMLTKVMALELG---PHKIRVNAVNPTVV 182

Query: 173 KTNIMREVPSFLSLMAFTVLKL-LGLLQSPEKGINSVLDAALAPPETSGV 221
            T++ +   S        + ++ LG     E  +N++L   L    +   
Sbjct: 183 MTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAIL--FLLSDRSGMT 230

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 52.3 bits (125), Expect = 9e-09
 Identities = 44/217 (20%), Positives = 67/217 (30%), Gaps = 33/217 (15%)

Query: 7   RNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTP 64
           + K  ++     D S      K   ++            + +LINN G + +      T 
Sbjct: 53  QKKGFQVTGSVCDASLRPEREKLMQTVSSMF-----GGKLDILINNLGAIRSKPTLDYTA 107

Query: 65  EGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFF 124
           E +   +STN   A+ L++L  PLLK S   + I   +                      
Sbjct: 108 EDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVV----------------- 150

Query: 125 LRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL 184
                     IY  +K  L   +  L      D  R     A  P V+ T +   V    
Sbjct: 151 ----SASVGSIYSATKGALNQLARNLACEWASDGIR---ANAVAPAVIATPLAEAVYDDE 203

Query: 185 SLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGV 221
                   K LG    PE+  + V    L  P  S +
Sbjct: 204 FKKVVISRKPLGRFGEPEEVSSLVA--FLCMPAASYI 238

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 50.8 bits (121), Expect = 3e-08
 Identities = 29/190 (15%), Positives = 58/190 (30%), Gaps = 42/190 (22%)

Query: 4   ITSRNKDA----------RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNA 53
           +     +                 +D++  +   +     ++         S+  L+NNA
Sbjct: 34  LADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREE------FGSVDGLVNNA 87

Query: 54  G--ILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN 111
           G          + E + +++  N  G F   K ++P +K++     IVN++S        
Sbjct: 88  GISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLM--- 143

Query: 112 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV 171
                                   Y  SK  +   S      LG   +  + V +  PG+
Sbjct: 144 -----------------GLALTSSYGASKWGVRGLSKLAAVELG---TDRIRVNSVHPGM 183

Query: 172 VKTNIMREVP 181
             T +  E  
Sbjct: 184 TYTPMTAETG 193

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 48.6 bits (115), Expect = 2e-07
 Identities = 34/210 (16%), Positives = 62/210 (29%), Gaps = 38/210 (18%)

Query: 7   RNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEG 66
           R + A  +    D+S    V +    + +     D   +   +     +       T E 
Sbjct: 53  RAEGALTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDL----TEED 108

Query: 67  YDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLR 126
           +D  M+TN  G FFLT+ L  L++           +    +   ++ +            
Sbjct: 109 FDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYC---------- 158

Query: 127 SKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL 186
                       SK         +          +V +    PG V T +  +V      
Sbjct: 159 -----------MSKFGQRGLVETMRLYAR---KCNVRITDVQPGAVYTPMWGKVDD---- 200

Query: 187 MAFTVLKLLGLLQSPEKGINSVLDAALAPP 216
                 ++  L+  PE     V+ A L P 
Sbjct: 201 ------EMQALMMMPEDIAAPVVQAYLQPS 224

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 48.5 bits (115), Expect = 2e-07
 Identities = 19/187 (10%), Positives = 45/187 (24%), Gaps = 40/187 (21%)

Query: 4   ITSRNKDARLE-------AFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI- 55
               +   + E         Q+   S Q   +  +++         +  + +L++N    
Sbjct: 29  CHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVT------SAYGQVDVLVSNDIFA 82

Query: 56  --LATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ 113
                  +   E Y   +    I  F L                          +    +
Sbjct: 83  PEFQPIDKYAVEDYRGAVEALQIRPFALV---------------------NAVASQMKKR 121

Query: 114 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVK 173
            +   I          +     Y  ++      +  L + LG     ++ V A  P  + 
Sbjct: 122 KSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELG---EYNIPVFAIGPNYLH 178

Query: 174 TNIMREV 180
           +      
Sbjct: 179 SEDSPYF 185

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.9 bits (113), Expect = 3e-07
 Identities = 36/228 (15%), Positives = 65/228 (28%), Gaps = 35/228 (15%)

Query: 2   ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSR 61
            ++ ++  D ++     DL +   V +   ++++            LLINNA  L   S+
Sbjct: 51  EELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPE--GLQRLLLINNAATLGDVSK 108

Query: 62  -----LTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN 116
                      +   + N      LT   L   ++SP  S+ V   S             
Sbjct: 109 GFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL-------- 160

Query: 117 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI 176
                      + Y    +Y   K    +    L       +   V V++  PG +  ++
Sbjct: 161 -----------QPYKGWGLYCAGKAARDMLYQVLAA-----EEPSVRVLSYAPGPLDNDM 204

Query: 177 MREVPSFLS----LMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSG 220
            +                 LK  G L         +L         SG
Sbjct: 205 QQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLLGLLQKDTFQSG 252

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 47.3 bits (112), Expect = 6e-07
 Identities = 20/189 (10%), Positives = 49/189 (25%), Gaps = 37/189 (19%)

Query: 4   ITSRNKDA----------RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNA 53
           +  ++ +            +     D+ S +   +            D       + + +
Sbjct: 34  VLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYS 93

Query: 54  GILATSSRLTPE-GYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA 112
             L      + +  +D++   N  G     K  LP L  S     ++   S         
Sbjct: 94  TALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR--GNVIFTISNAGFYP--- 148

Query: 113 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVV 172
                                 +Y  +K  ++       R L  + + +V V     G +
Sbjct: 149 -----------------NGGGPLYTAAKHAIVGLV----RELAFELAPYVRVNGVGSGGI 187

Query: 173 KTNIMREVP 181
            +++     
Sbjct: 188 NSDLRGPSS 196

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 44.3 bits (104), Expect = 5e-06
 Identities = 36/221 (16%), Positives = 68/221 (30%), Gaps = 53/221 (23%)

Query: 4   ITSRNKDA------------RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLIN 51
           I     D              +     D++  + V    D+          H  + ++  
Sbjct: 35  IADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAK------HGKLDIMFG 88

Query: 52  NAGILATS----SRLTPEGYDQMMSTNYIGAFFLTKLLLP--LLKNSPVPSRIVNVTSFT 105
           N G+L+T+         E + ++M  N  GAF + K      +           +++SFT
Sbjct: 89  NVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFT 148

Query: 106 HRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVI 165
                                      + +Y  +K  +L  +  L   LG      + V 
Sbjct: 149 AG----------------------EGVSHVYTATKHAVLGLTTSLCTELG---EYGIRVN 183

Query: 166 AADPGVVKTNIMREV----PSFLSLMAFTVLKLLGLLQSPE 202
              P +V + ++ +V     S +  +A     L G L   E
Sbjct: 184 CVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAE 224

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 43.5 bits (102), Expect = 8e-06
 Identities = 34/195 (17%), Positives = 66/195 (33%), Gaps = 45/195 (23%)

Query: 4   ITSRNKDA--------------RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLL 49
           + SRN +                  AF+ D+S+++ V K  +++++          +  +
Sbjct: 34  VASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK------FGKLDTV 87

Query: 50  INNAGI--LATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR 107
           +N AGI     +     + + Q++  N  G +++ +    LL+ S  PS I   +     
Sbjct: 88  VNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEE 147

Query: 108 NVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA 167
                                  P    Y  SK  +   +  L +  G      + V   
Sbjct: 148 --------------------VTMPNISAYAASKGGVASLTKALAKEWG---RYGIRVNVI 184

Query: 168 DPGVVKTNIMREVPS 182
            PG  +T +   V S
Sbjct: 185 APGWYRTKMTEAVFS 199

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.2 bits (101), Expect = 1e-05
 Identities = 28/157 (17%), Positives = 46/157 (29%), Gaps = 32/157 (20%)

Query: 61  RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT 120
                   + M  N++    LT   LP+LK S     IV V+S   +             
Sbjct: 110 HDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN--GSIVVVSSLAGK------------- 154

Query: 121 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV 180
                    YP    Y  SK  L  F   + +   + +   VS+     G++ T    + 
Sbjct: 155 -------VAYPMVAAYSASKFALDGFFSSIRKEYSVSRVN-VSITLCVLGLIDTETAMKA 206

Query: 181 PSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPE 217
            S +  M              E+    ++       E
Sbjct: 207 VSGIVHMQ---------AAPKEECALEIIKGGALRQE 234

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (101), Expect = 1e-05
 Identities = 37/225 (16%), Positives = 66/225 (29%), Gaps = 46/225 (20%)

Query: 7   RNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEG 66
                 LE  Q+D+   +SV   ++ + +  +D  + ++   L+           L  + 
Sbjct: 53  ACPPGSLETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGP------LEALGEDA 106

Query: 67  YDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLR 126
              ++  N +G   + +  LP +K       +V  +                        
Sbjct: 107 VASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG------------------ 148

Query: 127 SKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS---- 182
               P   +Y  SK  L      L   L       V +   + G V T  M +V      
Sbjct: 149 ---LPFNDVYCASKFALEGLCESLAVLLL---PFGVHLSLIECGPVHTAFMEKVLGSPEE 202

Query: 183 ------------FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP 215
                       F   +A +        Q+PE+     L A  AP
Sbjct: 203 VLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFLTALRAP 247

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 42.4 bits (98), Expect = 2e-05
 Identities = 29/188 (15%), Positives = 61/188 (32%), Gaps = 23/188 (12%)

Query: 4   ITSRNKDA------------RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLIN 51
            T RN++              +   ++DL +F +  K      + +      + +     
Sbjct: 34  TTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVAD-IEGVTKDQGLNVLFNNAG 92

Query: 52  NAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN 111
            A   A  + +  +     + TN +    L K  LPLLK +   +    +       +  
Sbjct: 93  IAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINM 152

Query: 112 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV 171
           + +          ++         Y  SK  L   +  L  +L     + +  ++  PG 
Sbjct: 153 SSILG-------SIQGNTDGGMYAYRTSKSALNAATKSLSVDLY---PQRIMCVSLHPGW 202

Query: 172 VKTNIMRE 179
           VKT++   
Sbjct: 203 VKTDMGGS 210

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 40.8 bits (95), Expect = 6e-05
 Identities = 35/230 (15%), Positives = 60/230 (26%), Gaps = 50/230 (21%)

Query: 4   ITSRNKDA----------RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNA 53
                 +                 +D++         D+             + +L+NNA
Sbjct: 35  FGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTA------FGGLHVLVNNA 88

Query: 54  GI--LATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN 111
           GI  + T        + +++  N  G F   +                            
Sbjct: 89  GILNIGTIEDYALTEWQRILDVNLTGVFLGIR---------------------AVVKPMK 127

Query: 112 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV 171
                  I                Y  +K  +   +      LG      + V +  PG+
Sbjct: 128 EAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELG---PSGIRVNSIHPGL 184

Query: 172 VKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGV 221
           VKT +   VP  +   A      LG    P +  N V+   LA  E+S  
Sbjct: 185 VKTPMTDWVPEDIFQTA------LGRAAEPVEVSNLVV--YLASDESSYS 226

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 38.9 bits (90), Expect = 3e-04
 Identities = 29/198 (14%), Positives = 53/198 (26%), Gaps = 50/198 (25%)

Query: 4   ITSRNKDA----------------RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQ 47
           IT RN+D                 ++ A   D++         ++             I 
Sbjct: 33  ITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK------FGKID 86

Query: 48  LLINNAGILATSSRL----TPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 103
           +L+NNAG              E Y +    N+     +T+                    
Sbjct: 87  ILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQ----------------KTKE 130

Query: 104 FTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVS 163
              +        +  + G      + +     Y  +K  L  ++     +L       V 
Sbjct: 131 HLIKTKGEIVNVSSIVAGP-----QAHSGYPYYACAKAALDQYTRCTAIDLI---QHGVR 182

Query: 164 VIAADPGVVKTNIMREVP 181
           V +  PG V T  M  + 
Sbjct: 183 VNSVSPGAVATGFMGAMG 200

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 37.9 bits (87), Expect = 6e-04
 Identities = 17/182 (9%), Positives = 39/182 (21%), Gaps = 31/182 (17%)

Query: 1   MADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS 60
             D+    + +     ++  S  +      D +   +        +  ++  AG  A  +
Sbjct: 31  SIDVVENEEASASVIVKMTDSFTEQA----DQVTAEVGKLLGDQKVDAILCVAGGWAGGN 86

Query: 61  RL---TPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE 117
                  +  D M   +   +   + L                     H           
Sbjct: 87  AKSKSLFKNCDLMWKQSIWTSTISSHLA------------------TKHLKEGGLLTLAG 128

Query: 118 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIM 177
                                +K  +      L            + IA  P  + T + 
Sbjct: 129 AKAALDGTPGMIGYGM-----AKGAVHQLCQSLAGKNSGMP-SGAAAIAVLPVTLDTPMN 182

Query: 178 RE 179
           R+
Sbjct: 183 RK 184

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 37.8 bits (87), Expect = 6e-04
 Identities = 31/185 (16%), Positives = 63/185 (34%), Gaps = 33/185 (17%)

Query: 7   RNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTP 64
           +   A+  A Q D+S    V+   D              +  +++N+G+        +T 
Sbjct: 52  KKLGAQGVAIQADISKPSEVVALFDKAVSH------FGGLDFVMSNSGMEVWCDELEVTQ 105

Query: 65  EGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFF 124
           E +D++ + N  G FF+ +  L   +         ++ +       +A            
Sbjct: 106 ELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHA------------ 153

Query: 125 LRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL 184
                     +Y  SK  +  F      + G   ++ V+V    PG VKT++  E     
Sbjct: 154 ----------LYAGSKAAVEGFCRAFAVDCG---AKGVTVNCIAPGGVKTDMFDENSWHY 200

Query: 185 SLMAF 189
           +   +
Sbjct: 201 APGGY 205

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 37.4 bits (86), Expect = 9e-04
 Identities = 30/192 (15%), Positives = 67/192 (34%), Gaps = 45/192 (23%)

Query: 4   ITSRNKDARLE--------------AFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLL 49
           +  R+K+                  A + D++    V+    S  +          + ++
Sbjct: 36  VNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE------FGKLDVM 89

Query: 50  INNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR 107
           INNAG+    +S  ++   +++++ TN  GAF  ++  +     + +   ++N++S   +
Sbjct: 90  INNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEK 149

Query: 108 NVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA 167
                                 +P    Y  SK  + + +  L         + + V   
Sbjct: 150 I--------------------PWPLFVHYAASKGGMKLMTETLALEYA---PKGIRVNNI 186

Query: 168 DPGVVKTNIMRE 179
            PG + T I  E
Sbjct: 187 GPGAINTPINAE 198

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 35.4 bits (81), Expect = 0.004
 Identities = 35/232 (15%), Positives = 62/232 (26%), Gaps = 46/232 (19%)

Query: 4   ITSRNKDA-------------RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLI 50
           ++  N DA             +  A + D++S Q +    D              + +L+
Sbjct: 40  VSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK------LGKVDILV 93

Query: 51  NNAGILATSS-RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV 109
           NNAG        +    + +    N    F                       S      
Sbjct: 94  NNAGGGGPKPFDMPMADFRRAYELNVFSFFH---------------------LSQLVAPE 132

Query: 110 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP 169
                    +T               Y  SK         +  +LG    +++ V    P
Sbjct: 133 MEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLG---EKNIRVNGIAP 189

Query: 170 GVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGV 221
           G + T+ ++ V +            +  L  P+   N+ L   L  P  S V
Sbjct: 190 GAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAAL--FLCSPAASWV 239

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	266
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.98
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.98
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.97
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.97
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.97
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.97
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.97
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.97
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.97
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.97
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.97
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.97
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.97
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.97
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.97
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.97
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.96
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.96
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.96
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.96
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.96
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.96
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.96
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.96
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.96
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.96
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.96
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.96
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.95
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.95
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.94
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.92
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.92
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.91
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.9
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.9
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.9
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.9
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.89
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.89
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.88
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.86
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.78
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.74
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.24
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.11
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	98.85
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	98.84
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	98.79
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	98.79
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	98.78
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.78
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	98.74
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.72
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	98.68
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	98.63
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	98.59
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	98.52
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.48
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	98.44
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	98.37
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	98.37
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.35
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	97.97
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	97.82
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	97.78
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	97.75
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	97.63
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	97.22
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	96.93
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	96.7
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	96.19
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	95.48
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	91.72

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.2e-35  Score=238.69  Aligned_cols=190  Identities=19%  Similarity=0.217  Sum_probs=162.5

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC-CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA-TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~-~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      +.++.+++||++++++++++++++.+      .++++|+||||||+.. ...+.+.++|++++++|+.|++++++.++|+
T Consensus        59 g~~~~~~~~Dvs~~~~~~~~~~~~~~------~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~  132 (255)
T d1fmca_          59 GGQAFACRCDITSEQELSALADFAIS------KLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPE  132 (255)
T ss_dssp             TCCEEEEECCTTCHHHHHHHHHHHHH------HHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCcEEEEEccCCCHHHHHHHHHHHHH------HcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhh
Confidence            45789999999999999999999999      5689999999999874 3347889999999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |++++ .++||++||.++                    ..+.++..+|+++|+++..|++++|.+++   ++||+||+|+
T Consensus       133 m~~~~-~g~Ii~isS~~~--------------------~~~~~~~~~Y~asKaal~~lt~~lA~el~---~~gIrVN~I~  188 (255)
T d1fmca_         133 MEKNG-GGVILTITSMAA--------------------ENKNINMTSYASSKAAASHLVRNMAFDLG---EKNIRVNGIA  188 (255)
T ss_dssp             HHHHT-CEEEEEECCGGG--------------------TCCCTTCHHHHHHHHHHHHHHHHHHHHHH---TTTEEEEEEE
T ss_pred             hcccc-ccccccccccch--------------------hccccccccchhHHHHHHHHHHHHHHHhC---ccCeEEEEee
Confidence            99887 889999999887                    34677888999999999999999999998   8999999999


Q ss_pred             CCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC---CcccceeecCCCccc
Q 024553          169 PGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTV  231 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~---~~~G~~~~~~~g~~~  231 (266)
                      ||+|+|++.................|++|+.+|+|+|+.+++  |.++   ..+|..+..++|...
T Consensus       189 PG~i~T~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~f--L~S~~s~~itG~~i~vDGG~~~  252 (255)
T d1fmca_         189 PGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALF--LCSPAASWVSGQILTVSGGGVQ  252 (255)
T ss_dssp             ECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHHHH--HHSGGGTTCCSCEEEESTTSCC
T ss_pred             eCcCcChHhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHH--HhCchhcCCcCCEEEECcCccc
Confidence            999999987664433333334445578899999999999994  4444   458999988888644

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=4.8e-35  Score=239.78  Aligned_cols=197  Identities=16%  Similarity=0.163  Sum_probs=164.7

Q ss_pred             hhcccCCCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC---CCCcCCCcccchhhhhhhhhHH
Q 024553            3 DITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAF   79 (266)
Q Consensus         3 ~i~~~~~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~---~~~~~~~~~~~~~~~~n~~~~~   79 (266)
                      ++.+..++.++.+++||++++++++++++++.+      ++++||+||||||+..   ++.+++.++|+++|++|+.|++
T Consensus        47 ~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~------~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~  120 (258)
T d1iy8a_          47 AVLETAPDAEVLTTVADVSDEAQVEAYVTATTE------RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVF  120 (258)
T ss_dssp             HHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH------HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHH
T ss_pred             HHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHH------HhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchh
Confidence            344556677899999999999999999999999      5689999999999763   4567899999999999999999


Q ss_pred             HHHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCC
Q 024553           80 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKS  159 (266)
Q Consensus        80 ~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~  159 (266)
                      ++++.++|+|++++ .|+||++||..+                    ..+.+...+|+++|+++..|+++||.+++   +
T Consensus       121 ~~~~~~~~~m~~~~-~G~Ii~isS~~~--------------------~~~~~~~~~Y~asKaal~~lt~~lA~el~---~  176 (258)
T d1iy8a_         121 LGLEKVLKIMREQG-SGMVVNTASVGG--------------------IRGIGNQSGYAAAKHGVVGLTRNSAVEYG---R  176 (258)
T ss_dssp             HHHHHHHHHHHHHT-CCEEEEECCGGG--------------------TSBCSSBHHHHHHHHHHHHHHHHHHHHHG---G
T ss_pred             hhhhhhHhhhhhhc-CCCCcccccHhh--------------------ccCCCCchHHHHHHHHHHHHHHHHHHHhC---c
Confidence            99999999999877 899999999987                    34677889999999999999999999998   8


Q ss_pred             CCeEEEEecCCcccCCccCcchh-------HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC---CcccceeecCCCc
Q 024553          160 RHVSVIAADPGVVKTNIMREVPS-------FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGR  229 (266)
Q Consensus       160 ~~i~v~~v~PG~v~T~~~~~~~~-------~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~---~~~G~~~~~~~g~  229 (266)
                      .||+||+|+||+|+|++......       ...........|++|+.+|+|+|+.++  +|.++   ..+|..+..++|.
T Consensus       177 ~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~--fL~S~~s~~itG~~i~VDGG~  254 (258)
T d1iy8a_         177 YGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVA--FLLSDDASYVNATVVPIDGGQ  254 (258)
T ss_dssp             GTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHH--HHTSGGGTTCCSCEEEESTTT
T ss_pred             cCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHHHHHHHHH--HHhCchhcCCcCceEEcCcch
Confidence            89999999999999998755321       111222233347788999999999999  55554   4579988888886


Q ss_pred             cc
Q 024553          230 TV  231 (266)
Q Consensus       230 ~~  231 (266)
                      ..
T Consensus       255 sa  256 (258)
T d1iy8a_         255 SA  256 (258)
T ss_dssp             TT
T ss_pred             hc
Confidence            43

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=5.3e-35  Score=237.59  Aligned_cols=189  Identities=22%  Similarity=0.243  Sum_probs=161.4

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.+++||+++.++++++++++.+      +++++|+||||||..  .++.+++.++|+++|++|+.|++++++.++|
T Consensus        50 g~~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~  123 (244)
T d1edoa_          50 GGQAITFGGDVSKEADVEAMMKTAID------AWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATK  123 (244)
T ss_dssp             TCEEEEEECCTTSHHHHHHHHHHHHH------HSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCcEEEEeCCCCCHHHHHHHHHHHHH------HcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHH
Confidence            45789999999999999999999999      679999999999987  4567889999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++++ .|+||++||.++..                    +.++..+|+++|+++..|+++|+.+++   ++||+||+|
T Consensus       124 ~m~~~~-~G~IVnisS~~~~~--------------------~~~~~~~Y~asKaal~~ltk~lA~el~---~~gIrvN~I  179 (244)
T d1edoa_         124 IMMKKR-KGRIINIASVVGLI--------------------GNIGQANYAAAKAGVIGFSKTAAREGA---SRNINVNVV  179 (244)
T ss_dssp             HHHHHT-CEEEEEECCTHHHH--------------------CCTTCHHHHHHHHHHHHHHHHHHHHHH---TTTEEEEEE
T ss_pred             HHHHcC-CcEEEEEcChhhcC--------------------CCCCCHHHHHHHHHHHHChHHHHHHHh---hhCcEEEEE
Confidence            999877 89999999998743                    567788999999999999999999998   899999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC--CcccceeecCCCc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP--ETSGVYFFGGKGR  229 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~--~~~G~~~~~~~g~  229 (266)
                      +||+++|++.....+.. ........|++|+.+|+|+|+.+++++..++  ..+|..+..++|-
T Consensus       180 ~PG~i~T~~~~~~~~~~-~~~~~~~~pl~R~~~p~dvA~~v~fLa~S~~a~~itG~~i~vdGG~  242 (244)
T d1edoa_         180 CPGFIASDMTAKLGEDM-EKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             EECSBCSHHHHTTCHHH-HHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred             ecceeccHHHHHhhHHH-HHHHHhcCCCCCCcCHHHHHHHHHHHHCCchhcCCcCCeEEeCCCe
Confidence            99999999987765432 2223334577889999999999995433222  4589988877774

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.2e-34  Score=236.52  Aligned_cols=195  Identities=22%  Similarity=0.317  Sum_probs=162.8

Q ss_pred             hhcccCCCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHH
Q 024553            3 DITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFF   80 (266)
Q Consensus         3 ~i~~~~~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~   80 (266)
                      +|.+.+ +.++.++.||++++++++++++++.+      ++++||+||||||+.  .++.+++.++|+++|++|+.|+++
T Consensus        48 ~l~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~  120 (251)
T d1vl8a_          48 KLTEKY-GVETMAFRCDVSNYEEVKKLLEAVKE------KFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYY  120 (251)
T ss_dssp             HHHHHH-CCCEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHH
T ss_pred             HHHHHh-CCcEEEEEccCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhh
Confidence            344444 45789999999999999999999998      568999999999986  466788999999999999999999


Q ss_pred             HHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCC
Q 024553           81 LTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSR  160 (266)
Q Consensus        81 l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~  160 (266)
                      +++.++|+|++++ .|+||+++|..+.                   ..+.+...+|+++|+++..|+++|+.+++   ++
T Consensus       121 ~~~~~~~~m~~~~-~G~Ii~i~S~~~~-------------------~~~~~~~~~Y~asKaal~~lt~~lA~e~~---~~  177 (251)
T d1vl8a_         121 VCREAFSLLRESD-NPSIINIGSLTVE-------------------EVTMPNISAYAASKGGVASLTKALAKEWG---RY  177 (251)
T ss_dssp             HHHHHHHHHTTCS-SCEEEEECCGGGT-------------------CCCSSSCHHHHHHHHHHHHHHHHHHHHHG---GG
T ss_pred             hhhhhhhcccccc-cccccccccchhc-------------------cccCccccchHHHHHhHHHHHHHHHHHhc---cc
Confidence            9999999999887 8999999997652                   22556678999999999999999999998   88


Q ss_pred             CeEEEEecCCcccCCccCcchhH-HHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC---CcccceeecCCCc
Q 024553          161 HVSVIAADPGVVKTNIMREVPSF-LSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGR  229 (266)
Q Consensus       161 ~i~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~---~~~G~~~~~~~g~  229 (266)
                      ||+||+|+||+|+|++....... ..........|++|+.+|+|+|+.++  +|.++   ..+|..+..++|-
T Consensus       178 gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~--fL~S~~a~~itG~~i~vDGG~  248 (251)
T d1vl8a_         178 GIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAV--FLASEEAKYVTGQIIFVDGGW  248 (251)
T ss_dssp             TCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHH--HHHSGGGTTCCSCEEEESTTG
T ss_pred             CeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHH--HHhCchhCCCcCcEEEeCcCe
Confidence            99999999999999998754322 22233344457889999999999999  44444   4579988888774

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=2.2e-34  Score=236.44  Aligned_cols=188  Identities=22%  Similarity=0.206  Sum_probs=154.6

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      ++++||+||||||+.  .++.+.+.++|+++|++|+.+++++++.++|
T Consensus        54 g~~~~~~~~Dv~~~~~v~~~~~~~~~------~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~  127 (260)
T d1x1ta1          54 GVKVLYDGADLSKGEAVRGLVDNAVR------QMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALP  127 (260)
T ss_dssp             TSCEEEECCCTTSHHHHHHHHHHHHH------HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCCCHHHHHHHHHHHHH------HhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhh
Confidence            55799999999999999999999999      568999999999987  4567889999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++++ .|+||+++|.++                    ..+.++..+|+++|+++..|++++|.+++   +.||+||+|
T Consensus       128 ~m~~~~-~G~Iv~isS~~~--------------------~~~~~~~~~Y~asKaal~~lt~~lA~el~---~~gIrVN~I  183 (260)
T d1x1ta1         128 HMKKQG-FGRIINIASAHG--------------------LVASANKSAYVAAKHGVVGFTKVTALETA---GQGITANAI  183 (260)
T ss_dssp             HHHHHT-CEEEEEECCGGG--------------------TSCCTTCHHHHHHHHHHHHHHHHHHHHHT---TTTEEEEEE
T ss_pred             hHhhcC-CceEeecccccc--------------------eeccCCcchhhhhhhhHHHhHHHHHHHhc---hhCcEEEEE
Confidence            999887 899999999987                    34677788999999999999999999998   899999999


Q ss_pred             cCCcccCCccCcchhHHH-----------HHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC---CcccceeecCCCc
Q 024553          168 DPGVVKTNIMREVPSFLS-----------LMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGR  229 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~-----------~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~---~~~G~~~~~~~g~  229 (266)
                      +||+|+|++.........           ........|++|+.+|+|+|+.+++  |+++   ..+|+.+..++|-
T Consensus       184 ~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~f--L~S~~a~~itG~~i~vDGG~  257 (260)
T d1x1ta1         184 CPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVF--LASDAAAQITGTTVSVDGGW  257 (260)
T ss_dssp             EECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHH--HHSGGGTTCCSCEEEESTTG
T ss_pred             ecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHHHHH--HhChhhCCCcCCEEEECcch
Confidence            999999999865422110           1112334578899999999999995  4443   4679988888774

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=1e-34  Score=236.38  Aligned_cols=188  Identities=23%  Similarity=0.245  Sum_probs=151.0

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||++++++++++++++.+      ++++||+||||||+.  .++.+++.++|+++|++|+.|++++++.++|
T Consensus        51 g~~~~~~~~Dvs~~~~v~~~~~~~~~------~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~  124 (247)
T d2ew8a1          51 GRRVLTVKCDVSQPGDVEAFGKQVIS------TFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVP  124 (247)
T ss_dssp             TCCEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCcEEEEEeeCCCHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHh
Confidence            46799999999999999999999999      568999999999987  3567889999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++++ .|+||+++|..+.                    .+.+...+|+++|+++..|+++||.+++   +.||+||+|
T Consensus       125 ~m~~~~-~G~Iv~isS~~~~--------------------~~~~~~~~Y~asKaal~~ltk~lA~ela---~~gIrVN~I  180 (247)
T d2ew8a1         125 GMKRNG-WGRIINLTSTTYW--------------------LKIEAYTHYISTKAANIGFTRALASDLG---KDGITVNAI  180 (247)
T ss_dssp             HHHHHT-CEEEEEECCGGGG--------------------SCCSSCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             HHHhcC-CCCccccccchhc--------------------ccCcccccchhhhccHHHHHHHHHHHhc---ccCeEEEEE
Confidence            999887 8999999999873                    3677788999999999999999999998   889999999


Q ss_pred             cCCcccCCccCcchhHHHHHH-HHHHHHhhcCCCHHHHHHHHHHHhcCCC---CcccceeecCCCc
Q 024553          168 DPGVVKTNIMREVPSFLSLMA-FTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGR  229 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~a~~~~~~~~~~~---~~~G~~~~~~~g~  229 (266)
                      +||+|+|++............ .....+++|+.+|+|+|+.++  +|.++   ..+|..+..++|-
T Consensus       181 ~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pedvA~~v~--fL~S~~s~~itG~~i~vDGG~  244 (247)
T d2ew8a1         181 APSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAA--FLASDDASFITGQTLAVDGGM  244 (247)
T ss_dssp             EECCC------------------CTTSSSCSCCCTHHHHHHHH--HHTSGGGTTCCSCEEEESSSC
T ss_pred             eeCCCCCccccccccchhHHHHHHHhccCCCCCCHHHHHHHHH--HHhCchhcCCcCCeEEECCCE
Confidence            999999999865433222111 112235678899999999999  55554   3579988877774

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=2.3e-34  Score=234.85  Aligned_cols=188  Identities=20%  Similarity=0.291  Sum_probs=156.1

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||++++++++++++++.+      .++++|+||||||..  .+..+.+.++|++++++|+.+++++++.++|
T Consensus        58 g~~~~~~~~Dvt~~~~v~~~~~~~~~------~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~  131 (251)
T d2c07a1          58 GYESSGYAGDVSKKEEISEVINKILT------EHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISK  131 (251)
T ss_dssp             TCCEEEEECCTTCHHHHHHHHHHHHH------HCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred             CCcEEEEEccCCCHHHHHHHHHHHHH------hcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCc
Confidence            45799999999999999999999998      679999999999987  3567788899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++++ .|+||++||..+.                    .+.+...+|+++|+++..|+++||.+++   +.||+||+|
T Consensus       132 ~m~~~~-~G~IVnisS~~~~--------------------~~~~~~~~Y~asKaal~~ltr~lA~el~---~~gIrVN~V  187 (251)
T d2c07a1         132 RMINNR-YGRIINISSIVGL--------------------TGNVGQANYSSSKAGVIGFTKSLAKELA---SRNITVNAI  187 (251)
T ss_dssp             HHHHHT-CEEEEEECCTHHH--------------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             ccccCC-CeEEEEECCHHhc--------------------CCCCCCHHHHHHHHHHHHHHHHHHHHhh---hhCeEEEEE
Confidence            999887 8999999999874                    3567778999999999999999999998   889999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc-CCCCcccceeecCCC
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAAL-APPETSGVYFFGGKG  228 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~-~~~~~~G~~~~~~~g  228 (266)
                      +||+|+|++....++.. ........|++|+.+|+|+|+.+++++- .+...+|..+..++|
T Consensus       188 ~PG~v~T~~~~~~~~~~-~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG  248 (251)
T d2c07a1         188 APGFISSDMTDKISEQI-KKNIISNIPAGRMGTPEEVANLACFLSSDKSGYINGRVFVIDGG  248 (251)
T ss_dssp             EECSBCC-----CCHHH-HHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ccCCEecccccccCHHH-HHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCCcCcEEEECCC
Confidence            99999999988765433 2223334578899999999999994432 123457988887776

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=3.1e-34  Score=235.18  Aligned_cols=192  Identities=19%  Similarity=0.279  Sum_probs=162.5

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.+++||++++++++++++++.+      ++++||+||||||+..  +..+++.++|++++++|+.|++++++.++|
T Consensus        56 g~~~~~~~~Dvt~~~~v~~~~~~~~~------~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~  129 (261)
T d1geea_          56 GGEAIAVKGDVTVESDVINLVQSAIK------EFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIK  129 (261)
T ss_dssp             TCEEEEEECCTTSHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCcEEEEEccCCCHHHHHHHHHHHHH------HhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhh
Confidence            45789999999999999999999998      5689999999999873  567889999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++++.+++||++||.++                    ..+.+...+|+++|+++..|+++||.+++   ++||+||+|
T Consensus       130 ~m~~~~~g~~Iv~isS~~~--------------------~~~~~~~~~Y~asKaal~~lt~~lA~e~~---~~gIrVN~I  186 (261)
T d1geea_         130 YFVENDIKGTVINMSSVHE--------------------KIPWPLFVHYAASKGGMKLMTETLALEYA---PKGIRVNNI  186 (261)
T ss_dssp             HHHHTTCCCEEEEECCGGG--------------------TSCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEE
T ss_pred             hhccccccccccccccchh--------------------cccCccccccccCCccchhhHHHHHHHhh---hhCcEEEEE
Confidence            9988774567999999987                    34677889999999999999999999998   899999999


Q ss_pred             cCCcccCCccCcchh-HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC---CcccceeecCCCcccc
Q 024553          168 DPGVVKTNIMREVPS-FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTVN  232 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~---~~~G~~~~~~~g~~~~  232 (266)
                      +||+|+|++...... ...........|++|+.+|+|+|+.+++  |+++   ..+|+.+..++|..+.
T Consensus       187 ~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~f--L~S~~s~~itG~~i~vDGG~sl~  253 (261)
T d1geea_         187 GPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAW--LASSEASYVTGITLFADGGMTLY  253 (261)
T ss_dssp             EECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHH--HHSGGGTTCCSCEEEESTTGGGC
T ss_pred             eeCcCcCHhHhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHH--HhCchhcCCcCCeEEECCCeeCC
Confidence            999999998765322 2222223334578899999999999994  4444   4589999989998774

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6e-35  Score=237.15  Aligned_cols=190  Identities=21%  Similarity=0.265  Sum_probs=161.5

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      +++++|+||||||..  .+..+.+.++|+++|++|+.+++++++.++|
T Consensus        49 ~~~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~  122 (243)
T d1q7ba_          49 GANGKGLMLNVTDPASIESVLEKIRA------EFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMR  122 (243)
T ss_dssp             GGGEEEEECCTTCHHHHHHHHHHHHH------HTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCCCcEEEEEecCHHHhhhhhhhhhc------ccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHH
Confidence            34788999999999999999999999      679999999999987  4567889999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++++ .|+||++||.++.                    .+.++..+|+++|+++..|++++|.+++   ++||+||+|
T Consensus       123 ~m~~~~-~G~II~isS~~~~--------------------~~~~~~~~Y~asKaal~~lt~~lA~ela---~~gIrVN~I  178 (243)
T d1q7ba_         123 AMMKKR-HGRIITIGSVVGT--------------------MGNGGQANYAAAKAGLIGFSKSLAREVA---SRGITVNVV  178 (243)
T ss_dssp             HHHHHT-CEEEEEECCHHHH--------------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             HHHHcC-CCEeeeecchhhc--------------------CCCCCCHHHHHHHHHHHHHHHHHHHHhC---ccCeEEEEE
Confidence            999877 8999999999874                    3567788999999999999999999998   899999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCcc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  230 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~  230 (266)
                      +||+|+|++.....+... .......|++|+.+|+|+|+.+++++-. +...+|+.+..++|-.
T Consensus       179 ~PG~i~T~~~~~~~~~~~-~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itGq~i~vdGG~~  241 (243)
T d1q7ba_         179 APGFIETDMTRALSDDQR-AGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLHVNGGMY  241 (243)
T ss_dssp             EECSBCCHHHHTSCHHHH-HHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             ecceEechhhhhhhhhHH-HHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCCeE
Confidence            999999999877654432 2233345788899999999999954421 2245899888887753

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=3e-34  Score=234.20  Aligned_cols=189  Identities=24%  Similarity=0.308  Sum_probs=161.2

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||++++++++++++++.+      .+++||+||||||..  .++.+++.++|+++|++|+.|++++++.++|
T Consensus        53 ~~~~~~~~~Dv~~~~~v~~~~~~~~~------~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~  126 (251)
T d1zk4a1          53 PDQIQFFQHDSSDEDGWTKLFDATEK------AFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQ  126 (251)
T ss_dssp             TTTEEEEECCTTCHHHHHHHHHHHHH------HHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCcEEEEEccCCCHHHHHHHHHHHHH------HhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHH
Confidence            45799999999999999999999999      568999999999987  4677889999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHh--hCCCCCCCeEEE
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRN--LGLDKSRHVSVI  165 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~--~~~~~~~~i~v~  165 (266)
                      +|++++.+++||+++|..+.                    .+.+...+|+++|+++..|++++|.+  +.   ++||+||
T Consensus       127 ~m~~~~~gg~Ii~isS~~~~--------------------~~~~~~~~Y~asKaal~~lt~~lA~e~~l~---~~gIrVN  183 (251)
T d1zk4a1         127 RMKNKGLGASIINMSSIEGF--------------------VGDPSLGAYNASKGAVRIMSKSAALDCALK---DYDVRVN  183 (251)
T ss_dssp             HHTTSSSCEEEEEECCGGGT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHHHT---TCSEEEE
T ss_pred             HHHhcCCCCceEeeecccee--------------------ccCCCchhHHHHHHHHhcchHHHHHHHhcC---CCcEEEE
Confidence            99988745699999999873                    46777889999999999999999998  55   7899999


Q ss_pred             EecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC---CcccceeecCCCc
Q 024553          166 AADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGR  229 (266)
Q Consensus       166 ~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~---~~~G~~~~~~~g~  229 (266)
                      +|+||+|+|++....+............|++|+.+|+|+|+.+++  |+++   ..+|..+..++|-
T Consensus       184 ~I~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~f--L~S~~s~~itG~~i~vDGG~  248 (251)
T d1zk4a1         184 TVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVY--LASNESKFATGSEFVVDGGY  248 (251)
T ss_dssp             EEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHHHHHHH--HHSGGGTTCCSCEEEESTTG
T ss_pred             EEeCCCCCChhHHhcCCHHHHHHHHhCCCCCCCcCHHHHHHHHHH--HhCchhCCCcCcEEEECccc
Confidence            999999999998776554433333334578899999999999994  4444   4579888877774

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=3.5e-34  Score=234.73  Aligned_cols=192  Identities=24%  Similarity=0.243  Sum_probs=138.6

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||++++++++++++++.+.+     .+++|+||||||+.  .+..+.+.++|+++|++|+.|++++++.++|
T Consensus        56 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-----~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~  130 (259)
T d1xq1a_          56 GFQVTGSVCDASLRPEREKLMQTVSSMF-----GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHP  130 (259)
T ss_dssp             TCCEEEEECCTTSHHHHHHHHHHHHHHH-----TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCceEEEeccCCCHHHHHHHHHHHHHHh-----CCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhh
Confidence            4579999999999999999999998832     26899999999987  4567889999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++++ .|+||++||..+.                    .+.+...+|+++|+++..|++++|.+++   ++||+||+|
T Consensus       131 ~m~~~~-~G~Iv~isS~~~~--------------------~~~~~~~~Y~asKaal~~lt~~lA~e~~---~~gIrVN~V  186 (259)
T d1xq1a_         131 LLKASG-CGNIIFMSSIAGV--------------------VSASVGSIYSATKGALNQLARNLACEWA---SDGIRANAV  186 (259)
T ss_dssp             HHHHHS-SCEEEEEC------------------------------CCHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEE
T ss_pred             cccccc-ccccccccccccc--------------------ccccccccccccccchhhhhHHHHHHhc---ccCeEEEEe
Confidence            999877 8999999999873                    3566778899999999999999999998   899999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC---CcccceeecCCCcccc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTVN  232 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~---~~~G~~~~~~~g~~~~  232 (266)
                      +||+|+|++.................|++|+.+|+|+|+.++  +|+++   ..+|..+..++|-.+.
T Consensus       187 ~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~--fL~S~~s~~iTG~~i~vDGG~s~~  252 (259)
T d1xq1a_         187 APAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVA--FLCMPAASYITGQTICVDGGLTVN  252 (259)
T ss_dssp             ECCSCC-------------------------CCGGGGHHHHH--HHTSGGGTTCCSCEEECCCCEEET
T ss_pred             ccCcccCHHhhhhchHHHHHHHHhCCCCCCCcCHHHHHHHHH--HHhCchhcCCcCcEEEeCCCEECC
Confidence            999999999877544433333445567889999999999999  55554   4589999988886553

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=3.3e-34  Score=234.59  Aligned_cols=190  Identities=24%  Similarity=0.300  Sum_probs=159.7

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||++++++++++++++.+      ++++||+||||||+.  .++.+++.++|++++++|+.|++++++.++|
T Consensus        49 g~~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~  122 (255)
T d1gega_          49 GGHAVAVKVDVSDRDQVFAAVEQARK------TLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVE  122 (255)
T ss_dssp             TCCEEEEECCTTSHHHHHHHHHHHHH------HTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCcEEEEEeeCCCHHHHHHHHHHHHH------HhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcc
Confidence            45799999999999999999999999      679999999999987  3567889999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|.+++..++|+++||.++                    ..+.+....|+++|+++..|+++||.+++   +.||+||+|
T Consensus       123 ~m~~~~~~g~Iv~isS~~~--------------------~~~~~~~~~Y~asKaal~~ltk~lA~el~---~~gIrVN~I  179 (255)
T d1gega_         123 AFKKEGHGGKIINACSQAG--------------------HVGNPELAVYSSSKFAVRGLTQTAARDLA---PLGITVNGY  179 (255)
T ss_dssp             HHHHHTSCEEEEEECCGGG--------------------TSCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             hhhhhccccccccccchhh--------------------cccCcccccchhCHHHHHhhHHHHHHHhh---hhCcEEEEE
Confidence            8877654788999999887                    34677889999999999999999999998   889999999


Q ss_pred             cCCcccCCccCcchhHHH----------HHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC---CcccceeecCCCcc
Q 024553          168 DPGVVKTNIMREVPSFLS----------LMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRT  230 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~----------~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~---~~~G~~~~~~~g~~  230 (266)
                      +||+|+|++.........          ........|++|+.+|+|+|+.++  ||+++   ..+|..+..++|-.
T Consensus       180 ~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~--fL~S~~a~~itG~~i~vDGG~~  253 (255)
T d1gega_         180 CPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVS--YLASPDSDYMTGQSLLIDGGMV  253 (255)
T ss_dssp             EECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHH--HHHSGGGTTCCSCEEEESSSSS
T ss_pred             ecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHHH--HHhCchhCCccCcEEEecCCEE
Confidence            999999998765432211          111223346788999999999999  44444   45799888887743

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=5.9e-34  Score=233.14  Aligned_cols=191  Identities=20%  Similarity=0.233  Sum_probs=161.0

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||++++++++++++++.+      ++++||+||||||+.  .+..+++.++|++++++|+.|++++++.++|
T Consensus        50 ~~~~~~~~~Dvt~~~~v~~~~~~~~~------~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~  123 (256)
T d1k2wa_          50 GPAACAIALDVTDQASIDRCVAELLD------RWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVAR  123 (256)
T ss_dssp             CTTEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCceEEEEeeCCCHHHHHHHHHHHHH------HhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccc
Confidence            45789999999999999999999999      568999999999987  4667889999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|.+++..|+||++||..+                    ..+.+...+|+++|+++..|++++|.+++   +.||+||+|
T Consensus       124 ~~~~~~~~g~Iv~isS~~~--------------------~~~~~~~~~Y~asKaal~~lt~~lA~el~---~~gIrVN~V  180 (256)
T d1k2wa_         124 AMIAGGRGGKIINMASQAG--------------------RRGEALVGVYCATKAAVISLTQSAGLNLI---RHGINVNAI  180 (256)
T ss_dssp             HHHHHTSCEEEEEECCGGG--------------------TSCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             hhHHhccCCccccccchhh--------------------ccccccccchhhhhhHHHHHHHHHHHHhc---ccCeEEEEE
Confidence            8766543799999999987                    34677889999999999999999999998   889999999


Q ss_pred             cCCcccCCccCcchhH----------HHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC---CcccceeecCCCccc
Q 024553          168 DPGVVKTNIMREVPSF----------LSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTV  231 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~----------~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~---~~~G~~~~~~~g~~~  231 (266)
                      +||+++|++.......          ..........|++|+.+|+|+|+.++  ||+++   ..+|..+..++|..+
T Consensus       181 ~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v~--fL~S~~a~~iTG~~i~vDGG~~m  255 (256)
T d1k2wa_         181 APGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAI--FLATPEADYIVAQTYNVDGGNWM  255 (256)
T ss_dssp             EECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHHHH--HTTSGGGTTCCSCEEEESTTSSC
T ss_pred             ecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHHHH--HHhCchhCCccCceEEECcchhh
Confidence            9999999997654321          11222334457889999999999999  66665   347998888888643

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=6.3e-34  Score=233.26  Aligned_cols=188  Identities=22%  Similarity=0.245  Sum_probs=157.7

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.+++||++++++++++++++.+      ++++||+||||||+.  .++.+++.++|+++|++|+.|++++++.++|
T Consensus        50 g~~~~~~~~Dvs~~~~v~~~~~~~~~------~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p  123 (257)
T d2rhca1          50 GVEADGRTCDVRSVPEIEALVAAVVE------RYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLK  123 (257)
T ss_dssp             TCCEEEEECCTTCHHHHHHHHHHHHH------HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHT
T ss_pred             CCcEEEEEeecCCHHHHHHHHHHHHH------HhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhH
Confidence            45799999999999999999999999      679999999999987  3567889999999999999999999999999


Q ss_pred             H--HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEE
Q 024553           88 L--LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVI  165 (266)
Q Consensus        88 ~--l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~  165 (266)
                      +  |++++ .++||+++|..+                    ..+.+...+|+++|+++..|+++||.+++   +.||+||
T Consensus       124 ~~~~~~~~-~g~Ii~i~S~~~--------------------~~~~~~~~~Y~asKaal~~ltk~lA~el~---~~gIrVN  179 (257)
T d2rhca1         124 AGGMLERG-TGRIVNIASTGG--------------------KQGVVHAAPYSASKHGVVGFTKALGLELA---RTGITVN  179 (257)
T ss_dssp             TTSHHHHT-EEEEEEECCGGG--------------------TSCCTTCHHHHHHHHHHHHHHHHHHHHTT---TSEEEEE
T ss_pred             HHHHHhcC-Cccccccccccc--------------------ccccccchhHHHHHHHHHHHHHHHHHHhh---hhCcEEE
Confidence            7  44554 689999999987                    34677889999999999999999999998   8899999


Q ss_pred             EecCCcccCCccCcchhH----------HHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC---CcccceeecCCCc
Q 024553          166 AADPGVVKTNIMREVPSF----------LSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGR  229 (266)
Q Consensus       166 ~v~PG~v~T~~~~~~~~~----------~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~---~~~G~~~~~~~g~  229 (266)
                      +|+||+|+|++.......          ..........|++|+.+|+|+|+.++  ||+++   ..+|..+..++|-
T Consensus       180 ~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~~v~--fL~S~~s~~itG~~i~vDGG~  254 (257)
T d2rhca1         180 AVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVA--YLIGPGAAAVTAQALNVCGGL  254 (257)
T ss_dssp             EEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHH--HHTSGGGTTCCSCEEEESTTC
T ss_pred             EEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHHHHHHHHH--HHhCchhcCCcCceEEECcCc
Confidence            999999999987654221          11222233457789999999999999  55554   4578888877773

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=6.8e-34  Score=230.69  Aligned_cols=186  Identities=20%  Similarity=0.267  Sum_probs=160.5

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.+++||++++++++++++++.+      +++++|+||||||..  .++.+++.++|+++|++|+.|++++++.++|
T Consensus        51 ~~~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~  124 (244)
T d1nffa_          51 ADAARYVHLDVTQPAQWKAAVDTAVT------AFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVK  124 (244)
T ss_dssp             GGGEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             hCcceEEEeecCCHHHHHHHHHHHHH------HhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHh
Confidence            35789999999999999999999999      568999999999987  4577889999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++++ .|+||++||..+                    ..+.+...+|+++|+++..|++++|.+++   +.||+||+|
T Consensus       125 ~m~~~~-~G~Ii~isS~~~--------------------~~~~~~~~~Y~asKaal~~ltk~lA~el~---~~gIrVN~I  180 (244)
T d1nffa_         125 PMKEAG-RGSIINISSIEG--------------------LAGTVACHGYTATKFAVRGLTKSTALELG---PSGIRVNSI  180 (244)
T ss_dssp             HHHHHT-CEEEEEECCGGG--------------------TSCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             HHHhcC-cceEEecccccc--------------------ccccccccchhhHHHHHHHHHHHHHHHhc---ccCEEEEEE
Confidence            999887 899999999987                    34677889999999999999999999998   899999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCccc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  231 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~  231 (266)
                      +||+|+|++....+...      ...|++|+.+|+|+|+.+++++.. +...+|+.+..++|...
T Consensus       181 ~PG~i~T~~~~~~~~~~------~~~pl~R~~~p~diA~~v~fL~s~~s~~itG~~i~vDGG~~a  239 (244)
T d1nffa_         181 HPGLVKTPMTDWVPEDI------FQTALGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGGTVA  239 (244)
T ss_dssp             EECCBCSGGGTTSCTTC------SCCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             eeCCccChhHhhhhHHH------HhccccCCCCHHHHHHHHHHHhChhhCCCcCCEEEECCCeec
Confidence            99999999987654432      124667889999999999954421 23468998888888754

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=6.3e-34  Score=230.15  Aligned_cols=187  Identities=18%  Similarity=0.219  Sum_probs=153.6

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      .++..++||++++++++++++++.+      .++++|+||||||+.  .++.+.+.|+|+++|++|+.+++.+++.++|+
T Consensus        45 ~~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~  118 (237)
T d1uzma1          45 KGLFGVEVDVTDSDAVDRAFTAVEE------HQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRS  118 (237)
T ss_dssp             TTSEEEECCTTCHHHHHHHHHHHHH------HHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             cCceEEEEecCCHHHHHHHHHHHHH------hcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhc
Confidence            4678899999999999999999999      568999999999987  35678899999999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |++++ .|+||++||..+.                    .+.++..+|+++|+++..|+++++.++.   ++||+||+|+
T Consensus       119 m~~~~-~g~Iv~isS~~~~--------------------~~~~~~~~Y~asKaal~~lt~~lA~e~~---~~gIrVN~I~  174 (237)
T d1uzma1         119 MQRNK-FGRMIFIGSVSGL--------------------WGIGNQANYAASKAGVIGMARSIARELS---KANVTANVVA  174 (237)
T ss_dssp             HHHTT-CEEEEEECCCCC-------------------------CCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEE
T ss_pred             ccccC-CCceEEEcchhhc--------------------cCCcccHHHHHHHHHHHHHHHHHHhhhh---cCCceeeeee
Confidence            99988 8899999999873                    3567788999999999999999999998   8999999999


Q ss_pred             CCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCC
Q 024553          169 PGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKG  228 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g  228 (266)
                      ||+|+|++.+...+.. ........|++|+.+|+|+|+.+++++.. +...+|..+..++|
T Consensus       175 PG~v~T~~~~~~~~~~-~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~~i~vdGG  234 (237)
T d1uzma1         175 PGYIDTDMTRALDERI-QQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGG  234 (237)
T ss_dssp             ECSBCCHHHHHSCHHH-HHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             eCcCCChhhhccCHHH-HHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence            9999999987654332 22223345778899999999999944321 23457998887776

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=1.6e-33  Score=230.92  Aligned_cols=190  Identities=23%  Similarity=0.295  Sum_probs=159.9

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCC-CcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHS-SIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~-~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      +.++.++.||++++++++++++++.+      +++ ++|+||||||+.  .++.+.+.|+|+++|++|+.|++++++.++
T Consensus        56 g~~~~~~~~Dv~~~~~v~~~~~~~~~------~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~  129 (259)
T d2ae2a_          56 GFKVEASVCDLSSRSERQELMNTVAN------HFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAH  129 (259)
T ss_dssp             TCEEEEEECCTTCHHHHHHHHHHHHH------HTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CCCceEEEeeCCCHHHHHHHHHHHHH------HhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeecc
Confidence            45789999999999999999999988      444 799999999987  356788999999999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |+|++++ .|+||+++|..+                    ..+.+....|+++|+++..|++++|.+++   +.+|+||+
T Consensus       130 ~~m~~~~-~G~Ii~isS~~~--------------------~~~~~~~~~Y~asKaal~~lt~~lA~el~---~~gIrVN~  185 (259)
T d2ae2a_         130 PFLKASE-RGNVVFISSVSG--------------------ALAVPYEAVYGATKGAMDQLTRCLAFEWA---KDNIRVNG  185 (259)
T ss_dssp             HHHHHTS-SEEEEEECCGGG--------------------TSCCTTCHHHHHHHHHHHHHHHHHHHHTG---GGTEEEEE
T ss_pred             chhhhhc-cccccccccccc--------------------ccccccccchHHHHHHHHHHHHHHHHHhC---cCceEEEE
Confidence            9999887 899999999987                    34677788999999999999999999998   88999999


Q ss_pred             ecCCcccCCccCcchhH----HHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC---CcccceeecCCCccc
Q 024553          167 ADPGVVKTNIMREVPSF----LSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTV  231 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~~----~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~---~~~G~~~~~~~g~~~  231 (266)
                      |+||+|+|++.......    ..........|++|+.+|+|+|+.+++  |+++   ..+|..+..++|-..
T Consensus       186 I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~f--L~S~~s~~itG~~i~VDGG~~a  255 (259)
T d2ae2a_         186 VGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAF--LCFPAASYVTGQIIYVDGGLMA  255 (259)
T ss_dssp             EEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHH--HHSGGGTTCCSCEEEESTTGGG
T ss_pred             eeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHH--HhCchhCCCcCcEEEECCCeEe
Confidence            99999999987543221    112223334578899999999999994  4444   458999888887644

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.7e-33  Score=228.34  Aligned_cols=188  Identities=19%  Similarity=0.190  Sum_probs=157.9

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      ++.++.||++++++++++++++.+      +++++|+||||||+.  .++.+.+.++|++++++|+.|++++++.++|+|
T Consensus        50 ~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m  123 (242)
T d1ulsa_          50 GAHPVVMDVADPASVERGFAEALA------HLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAM  123 (242)
T ss_dssp             TCEEEECCTTCHHHHHHHHHHHHH------HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEecCCHHHHHHHHHHHHH------hcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccc
Confidence            467899999999999999999998      568999999999987  356788999999999999999999999999999


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      ++++ .++|+++||...                     .+.++..+|+++|+++..|+++||.+++   ++|||||+|+|
T Consensus       124 ~~~~-~~~i~~~ss~~~---------------------~~~~~~~~Y~asKaal~~ltk~lA~ela---~~gIrVN~I~P  178 (242)
T d1ulsa_         124 REKN-PGSIVLTASRVY---------------------LGNLGQANYAASMAGVVGLTRTLALELG---RWGIRVNTLAP  178 (242)
T ss_dssp             TTTC-CEEEEEECCGGG---------------------GCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEE
T ss_pred             cccc-cceeeeeccccc---------------------cCCCCCcchHHHHHHHHHHHHHHHHHHh---hhCcEEEEEee
Confidence            9877 778888777542                     3566778999999999999999999998   88999999999


Q ss_pred             CcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc-CCCCcccceeecCCCccc
Q 024553          170 GVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAAL-APPETSGVYFFGGKGRTV  231 (266)
Q Consensus       170 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~-~~~~~~G~~~~~~~g~~~  231 (266)
                      |+|+|++....++.. ........|++|+.+|+|+|+.+++++- .+...+|..+..++|..+
T Consensus       179 G~v~T~~~~~~~~~~-~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~t~  240 (242)
T d1ulsa_         179 GFIETRMTAKVPEKV-REKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQVLFVDGGRTI  240 (242)
T ss_dssp             CSBCCTTTSSSCHHH-HHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             CcccChhhhcCCHHH-HHHHHhcCCCCCCCCHHHHHHHHHHHhchhhCCCCCcEEEECCCccC
Confidence            999999988765433 2333445578899999999999994432 123458999888888654

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=5.7e-33  Score=225.01  Aligned_cols=166  Identities=28%  Similarity=0.387  Sum_probs=147.5

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+      +++++|+||||||+.  .+..+.+.++|+++|++|+.|++++++.++|
T Consensus        56 g~~~~~~~~Dvt~~~~v~~~~~~~~~------~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~  129 (240)
T d2bd0a1          56 GALTDTITADISDMADVRRLTTHIVE------RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFA  129 (240)
T ss_dssp             TCEEEEEECCTTSHHHHHHHHHHHHH------HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCcEEEEEecCCCHHHHHHHHHHHHH------HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhH
Confidence            56799999999999999999999999      679999999999987  4667889999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++++ .|+||++||.++                    ..+.++...|+++|+++..|+++|+.+++   +.||+||+|
T Consensus       130 ~m~~~~-~G~Ii~isS~~~--------------------~~~~~~~~~Y~asK~al~~lt~~la~el~---~~gIrvn~i  185 (240)
T d2bd0a1         130 LMERQH-SGHIFFITSVAA--------------------TKAFRHSSIYCMSKFGQRGLVETMRLYAR---KCNVRITDV  185 (240)
T ss_dssp             HHHHHT-CEEEEEECCGGG--------------------TSCCTTCHHHHHHHHHHHHHHHHHHHHHT---TTTEEEEEE
T ss_pred             HHHhcC-CCceEEEechhh--------------------cCCCCCChHHHHHHHHHHHHHHHHHHHhC---cCCeEEEEe
Confidence            999877 899999999987                    34677889999999999999999999998   889999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP  215 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~  215 (266)
                      +||+|+|++.........          .++.+|+|+|+.+++++..+
T Consensus       186 ~PG~v~T~~~~~~~~~~~----------~~~~~PedvA~~v~~l~s~~  223 (240)
T d2bd0a1         186 QPGAVYTPMWGKVDDEMQ----------ALMMMPEDIAAPVVQAYLQP  223 (240)
T ss_dssp             EECCBCSTTTCCCCSTTG----------GGSBCHHHHHHHHHHHHTSC
T ss_pred             eeCcccCchhhhcCHhhH----------hcCCCHHHHHHHHHHHHcCC
Confidence            999999999877644321          24569999999999766543

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.6e-33  Score=229.26  Aligned_cols=189  Identities=22%  Similarity=0.227  Sum_probs=156.8

Q ss_pred             EEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           13 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        13 ~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      ..+++||+++.++++++++++.+      ++++||+||||||+.  .++.+.+.|+|+++|++|+.|++++++.++|+|+
T Consensus        50 ~~~~~~Dv~~~~~v~~~~~~~~~------~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~  123 (248)
T d2d1ya1          50 GAFFQVDLEDERERVRFVEEAAY------ALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMR  123 (248)
T ss_dssp             CEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             CeEEEEeCCCHHHHHHHHHHHHH------hcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccc
Confidence            46789999999999999999999      568999999999987  3567889999999999999999999999999999


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                      +++ .|+||+++|..+                    ..+.+...+|+++|+++..|++++|.+++   ++||+||+|+||
T Consensus       124 ~~~-~G~Ii~isS~~~--------------------~~~~~~~~~Y~asKaal~~ltk~lA~el~---~~gIrVN~I~PG  179 (248)
T d2d1ya1         124 KVG-GGAIVNVASVQG--------------------LFAEQENAAYNASKGGLVNLTRSLALDLA---PLRIRVNAVAPG  179 (248)
T ss_dssp             TTT-CEEEEEECCGGG--------------------TSBCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEEC
T ss_pred             ccc-cccccccccccc--------------------cccccccchhHHHHHHHHHHHHHHHHHhh---hhCcEEEEEeeC
Confidence            887 899999999987                    34677889999999999999999999998   889999999999


Q ss_pred             cccCCccCcchh-----HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc-CCCCcccceeecCCCccc
Q 024553          171 VVKTNIMREVPS-----FLSLMAFTVLKLLGLLQSPEKGINSVLDAAL-APPETSGVYFFGGKGRTV  231 (266)
Q Consensus       171 ~v~T~~~~~~~~-----~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~-~~~~~~G~~~~~~~g~~~  231 (266)
                      +|+|++......     ...........|++|+.+|+|+|+.+++++- .+...+|+.+..++|-..
T Consensus       180 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~ta  246 (248)
T d2d1ya1         180 AIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITGAILPVDGGMTA  246 (248)
T ss_dssp             SBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEcCcCccc
Confidence            999998654211     1111122333477889999999999994432 123468998888887543

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.7e-34  Score=230.98  Aligned_cols=195  Identities=19%  Similarity=0.231  Sum_probs=159.9

Q ss_pred             hhcccCCCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC---CCCcCCCcccchhhhhhhhhHH
Q 024553            3 DITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAF   79 (266)
Q Consensus         3 ~i~~~~~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~---~~~~~~~~~~~~~~~~n~~~~~   79 (266)
                      ++.+..+  .+.++.||+++.++++++++++.+      ++++||+||||||+..   ++.+.+.++|+++|++|+.|++
T Consensus        45 ~~~~~~~--~~~~~~~Dvs~~~~v~~~~~~~~~------~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~  116 (250)
T d1ydea1          45 ALEQELP--GAVFILCDVTQEDDVKTLVSETIR------RFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTY  116 (250)
T ss_dssp             HHHHHCT--TEEEEECCTTSHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHH
T ss_pred             HHHHhcC--CCeEEEccCCCHHHHHHHHHHHHH------hcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHH
Confidence            4444543  478999999999999999999999      5689999999999763   3457889999999999999999


Q ss_pred             HHHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCC
Q 024553           80 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKS  159 (266)
Q Consensus        80 ~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~  159 (266)
                      ++++.++|+|+++  +|+||++||..+..                    +.+...+|+++|+++..|+++||.+++   +
T Consensus       117 ~~~~~~~p~m~~~--~G~Ii~isS~~~~~--------------------~~~~~~~Y~asKaal~~lt~~lA~e~a---~  171 (250)
T d1ydea1         117 TLTKLALPYLRKS--QGNVINISSLVGAI--------------------GQAQAVPYVATKGAVTAMTKALALDES---P  171 (250)
T ss_dssp             HHHHHHHHHHHHH--TCEEEEECCHHHHH--------------------CCTTCHHHHHHHHHHHHHHHHHHHHHG---G
T ss_pred             HHHHHhhHHHHhC--CCCCcccccccccc--------------------cccCcchhHHHHhhHHHHHHHHHHHhc---c
Confidence            9999999999865  48999999998743                    567788999999999999999999998   8


Q ss_pred             CCeEEEEecCCcccCCccCcch-----hHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcc
Q 024553          160 RHVSVIAADPGVVKTNIMREVP-----SFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRT  230 (266)
Q Consensus       160 ~~i~v~~v~PG~v~T~~~~~~~-----~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~  230 (266)
                      .+|+||+|+||+|+|++.....     +...........|++|+.+|+|+|+.+++++-.+...+|+.+..++|-.
T Consensus       172 ~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eva~~v~fL~Sda~~itG~~i~vDGG~~  247 (250)
T d1ydea1         172 YGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASEANFCTGIELLVTGGAE  247 (250)
T ss_dssp             GTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHHCTTCCSCEEEESTTTT
T ss_pred             cCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccCCCcCCeEEECCCcc
Confidence            9999999999999999865431     1122233334457889999999999999655333455888887777754

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=1.9e-33  Score=230.60  Aligned_cols=187  Identities=20%  Similarity=0.212  Sum_probs=156.9

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC---CCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      +.++.++.||++++++++++++++.+      +++++|+||||||+..   ++.+++.++|+++|++|+.+++++++.++
T Consensus        53 g~~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~  126 (260)
T d1zema1          53 GVEARSYVCDVTSEEAVIGTVDSVVR------DFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVS  126 (260)
T ss_dssp             TSCEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CCcEEEEEccCCCHHHHHHHHHHHHH------HhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHH
Confidence            45799999999999999999999998      5689999999999763   46788999999999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |.|++++ .|+||++||..+.                    .+.+...+|+++|+++..|++++|.+++   +.||+||+
T Consensus       127 ~~m~~~~-~G~II~isS~~~~--------------------~~~~~~~~Y~asKaal~~ltk~lA~el~---~~gIrVN~  182 (260)
T d1zema1         127 RQMITQN-YGRIVNTASMAGV--------------------KGPPNMAAYGTSKGAIIALTETAALDLA---PYNIRVNA  182 (260)
T ss_dssp             HHHHHHT-CEEEEEECCHHHH--------------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEE
T ss_pred             hhhhhhc-CCCCCeeechhhc--------------------cCCcchHHHHHHHHHHHHHHHHHHHHhh---hhCCEEEE
Confidence            9998877 8999999999873                    3677788999999999999999999998   88999999


Q ss_pred             ecCCcccCCccCcchh---------------HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC---CcccceeecCCC
Q 024553          167 ADPGVVKTNIMREVPS---------------FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKG  228 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~---------------~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~---~~~G~~~~~~~g  228 (266)
                      |+||+|+|++......               ...........|++|+.+|+|+|+.++  ||.++   ..+|..+..++|
T Consensus       183 I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~--fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         183 ISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVA--FLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             EEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHH--HHHSGGGTTCCSCEEEESCC
T ss_pred             eccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHH--HHhCchhcCccCCeEEeCCC
Confidence            9999999998643211               111222233457889999999999999  45554   447887776665

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=1.3e-32  Score=229.46  Aligned_cols=211  Identities=17%  Similarity=0.172  Sum_probs=170.0

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||++++++++++++++.+      .++++|+||||||+.  .+..+.+.++|++++++|+.|++++++.++|
T Consensus        65 ~~~~~~~~~Dvs~~~~v~~~~~~~~~------~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~  138 (297)
T d1yxma1          65 QARVIPIQCNIRNEEEVNNLVKSTLD------TFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYS  138 (297)
T ss_dssp             CCCEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CceEEEEeccCCCHHHHHHHHHHHHH------HhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHH
Confidence            56899999999999999999999998      568999999999986  4667889999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++++ .++||++||..                     ...++....|+++|+++..|++++|.+++   ++||+||+|
T Consensus       139 ~m~~~~-~g~Ii~~ss~~---------------------~~~~~~~~~Y~asKaal~~ltk~lA~el~---~~gIrVN~I  193 (297)
T d1yxma1         139 SWMKEH-GGSIVNIIVPT---------------------KAGFPLAVHSGAARAGVYNLTKSLALEWA---CSGIRINCV  193 (297)
T ss_dssp             HTHHHH-CEEEEEECCCC---------------------TTCCTTCHHHHHHHHHHHHHHHHHHHHTG---GGTEEEEEE
T ss_pred             hhcccc-ccccccccccc---------------------cccccccccchhHHHHHHHHHHHHHHHhc---ccCceEEEe
Confidence            999877 78899887654                     23567788999999999999999999998   889999999


Q ss_pred             cCCcccCCccCcchhH---HHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC---CcccceeecCCCcccc---------
Q 024553          168 DPGVVKTNIMREVPSF---LSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTVN---------  232 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~---~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~---~~~G~~~~~~~g~~~~---------  232 (266)
                      +||+|+|++.......   ..........|++|+.+|+|+|+.++  +|+++   ..+|..+..++|..+.         
T Consensus       194 ~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plgR~g~pedvA~~v~--fL~Sd~s~~iTG~~i~VDGG~sl~~~~~~~~~~  271 (297)
T d1yxma1         194 APGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVC--FLLSPAASFITGQSVDVDGGRSLYTHSYEVPDH  271 (297)
T ss_dssp             EECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHH--HHHSGGGTTCCSCEEEESTTGGGCBTTCCCCCC
T ss_pred             eeCcCcCcchhhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHH--HHhCchhcCcCCcEEEeCcChhhhcCCCCCCCc
Confidence            9999999987543221   11111223347789999999999999  44454   4589999888887663         


Q ss_pred             --CCccccCHHHHHHHHHHHHHH
Q 024553          233 --SSALSFNSKLAGELWTTSCNL  253 (266)
Q Consensus       233 --~~~~~~~~~~~~~~~~~~~~~  253 (266)
                        |.....+.+..+++++...+-
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~  294 (297)
T d1yxma1         272 DNWPKGAGDLSVVKKMKETFKEK  294 (297)
T ss_dssp             SCCCCCSSCCHHHHHHHHHHHHH
T ss_pred             ccccccCCchHHHHHHhHhhHHh
Confidence              222234557777777776654

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.98  E-value=1e-33  Score=231.01  Aligned_cols=189  Identities=20%  Similarity=0.183  Sum_probs=158.1

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||++++++++++++++.+      +++++|+||||||+.  .+..+.+.++|++++++|+.|++++++.++|
T Consensus        50 ~~~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p  123 (254)
T d1hdca_          50 GDAARYQHLDVTIEEDWQRVVAYARE------EFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIP  123 (254)
T ss_dssp             GGGEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCceEEEEcccCCHHHHHHHHHHHHH------HcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHH
Confidence            45799999999999999999999998      568999999999987  3567889999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++++ .|+||++||..+                    ..+.+...+|+++|+++..|+++||.+++   +.||+||+|
T Consensus       124 ~m~~~~-~G~II~isS~~~--------------------~~~~~~~~~Y~asKaal~~lt~~lA~e~a---~~gIrVN~I  179 (254)
T d1hdca_         124 AMKDAG-GGSIVNISSAAG--------------------LMGLALTSSYGASKWGVRGLSKLAAVELG---TDRIRVNSV  179 (254)
T ss_dssp             HHHHHT-CEEEEEECCGGG--------------------TSCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             HHhhcC-CCeecccccchh--------------------cccccchhhHHHHHHHHHHHHHHHHHHhC---CCceEEEEe
Confidence            999887 899999999987                    34677788999999999999999999998   889999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCC-CHHHHHHHHHHHhcCCC---CcccceeecCCCccc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQ-SPEKGINSVLDAALAPP---ETSGVYFFGGKGRTV  231 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~a~~~~~~~~~~~---~~~G~~~~~~~g~~~  231 (266)
                      +||+|+|++........ ........|++|+. .|+|+|+.+++  |.++   ..+|..+..++|-..
T Consensus       180 ~PG~v~T~~~~~~~~~~-~~~~~~~~pl~R~g~~PedvA~~v~f--L~S~~a~~itG~~i~vDGG~t~  244 (254)
T d1hdca_         180 HPGMTYTPMTAETGIRQ-GEGNYPNTPMGRVGNEPGEIAGAVVK--LLSDTSSYVTGAELAVDGGWTT  244 (254)
T ss_dssp             EECSBCCHHHHHHTCCC-STTSCTTSTTSSCB-CHHHHHHHHHH--HHSGGGTTCCSCEEEESTTTTT
T ss_pred             eeCcccCccchhcCHHH-HHHHHhCCCCCCCCCCHHHHHHHHHH--HhchhhCCCCCceEEeCCCccC
Confidence            99999999875432211 11111234567776 69999999994  4444   458999888888644

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1e-31  Score=219.55  Aligned_cols=197  Identities=16%  Similarity=0.146  Sum_probs=162.6

Q ss_pred             hhcccCCCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHH
Q 024553            3 DITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLT   82 (266)
Q Consensus         3 ~i~~~~~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~   82 (266)
                      ++.+.+++.++.++.||+++.++++++++++.+      +++++|+||||||+..      .++|++++++|+.+++.++
T Consensus        46 ~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~------~~G~iDilVnnAg~~~------~~~~~~~~~~n~~~~~~~~  113 (254)
T d2gdza1          46 ALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVD------HFGRLDILVNNAGVNN------EKNWEKTLQINLVSVISGT  113 (254)
T ss_dssp             HHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHH------HHSCCCEEEECCCCCC------SSSHHHHHHHHTHHHHHHH
T ss_pred             HHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHH------HcCCcCeecccccccc------cccchheeeeehhhHHHHH
Confidence            455566677899999999999999999999998      5689999999999853      4569999999999999999


Q ss_pred             HhhHHHHhcCC--CCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHH--HHHhhCCCC
Q 024553           83 KLLLPLLKNSP--VPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYE--LHRNLGLDK  158 (266)
Q Consensus        83 ~~~~~~l~~~~--~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~--la~~~~~~~  158 (266)
                      +.++|+|+++.  .+|+||++||.++                    ..+.+...+|+++|+++..|+++  |+.++.   
T Consensus       114 ~~~~~~m~~~~~~~~g~Iv~isS~~~--------------------~~~~~~~~~Y~asKaal~~ltrs~ala~e~~---  170 (254)
T d2gdza1         114 YLGLDYMSKQNGGEGGIIINMSSLAG--------------------LMPVAQQPVYCASKHGIVGFTRSAALAANLM---  170 (254)
T ss_dssp             HHHHHHHCGGGTCCCEEEEEECCGGG--------------------TSCCTTCHHHHHHHHHHHHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHHhhcCCCcEEEeeccHhh--------------------ccCCCCccchHHHHHHHHHHHHHHHHHHHhc---
Confidence            99999998653  2588999999987                    34677888999999999999997  688997   


Q ss_pred             CCCeEEEEecCCcccCCccCcchhHH-------HHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCccc
Q 024553          159 SRHVSVIAADPGVVKTNIMREVPSFL-------SLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  231 (266)
Q Consensus       159 ~~~i~v~~v~PG~v~T~~~~~~~~~~-------~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~  231 (266)
                      ++||+||+|+||+|+|++........       .........+++++.+|+|+|+.+++++. ++..+|..+..++|..+
T Consensus       171 ~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s-~~~itG~~i~VdGG~~~  249 (254)
T d2gdza1         171 NSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIE-DDALNGAIMKITTSKGI  249 (254)
T ss_dssp             TCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHHH-CTTCSSCEEEEETTTEE
T ss_pred             CCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHc-CCCCCCCEEEECCCCee
Confidence            89999999999999999876643221       11223345577889999999999996553 34579999988888877


Q ss_pred             cCCc
Q 024553          232 NSSA  235 (266)
Q Consensus       232 ~~~~  235 (266)
                      ..++
T Consensus       250 ~~~~  253 (254)
T d2gdza1         250 HFQD  253 (254)
T ss_dssp             EECC
T ss_pred             eccc
Confidence            6543

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.97  E-value=7.6e-32  Score=222.09  Aligned_cols=195  Identities=19%  Similarity=0.255  Sum_probs=156.5

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC----CCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA----TSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      ..+.++.||++++++++++++++.+      +++++|+||||||+..    ...+.+.++|+++|++|+.|++++++.++
T Consensus        54 ~~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~  127 (268)
T d2bgka1          54 DVISFVHCDVTKDEDVRNLVDTTIA------KHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAA  127 (268)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CceEEEEccCCCHHHHHHHHHHHHH------HcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhc
Confidence            4688999999999999999999998      5689999999999863    24567889999999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |+|++++ .|+||+++|..+..                   ........|+++|+++..|++++|.+++   ++||+||+
T Consensus       128 ~~m~~~~-~g~ii~iss~~~~~-------------------~~~~~~~~Y~asKaal~~lt~~lA~el~---~~gIrVN~  184 (268)
T d2bgka1         128 RVMIPAK-KGSIVFTASISSFT-------------------AGEGVSHVYTATKHAVLGLTTSLCTELG---EYGIRVNC  184 (268)
T ss_dssp             HHHGGGT-CEEEEEECCGGGTC-------------------CCTTSCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEE
T ss_pred             chHhhcC-CCCccccccccccc-------------------cccccccccchhHHHHHhCHHHHHHHhC---hhCeEEEe
Confidence            9999887 89999999988732                   1223345799999999999999999998   88999999


Q ss_pred             ecCCcccCCccCcchhH--H--HHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCccccCC
Q 024553          167 ADPGVVKTNIMREVPSF--L--SLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVNSS  234 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~~--~--~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~~~~  234 (266)
                      |+||+|+|++.......  .  .........+.+++.+|+|+|+.+++++-. +...+|+.+..++|-....+
T Consensus       185 I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~itGq~i~VDGG~t~~~p  257 (268)
T d2bgka1         185 VSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNP  257 (268)
T ss_dssp             EEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCT
T ss_pred             cCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHHHHHHHHHHhChhhCCccCceEEECcCcccCCC
Confidence            99999999998764221  1  111112223567889999999999954321 23468999988888765443

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.97  E-value=2.1e-32  Score=223.47  Aligned_cols=185  Identities=16%  Similarity=0.146  Sum_probs=156.7

Q ss_pred             EEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC---CCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           15 AFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        15 ~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      ++.||+++.++++++++++.+      ++++||+||||||+.   .+..+++.++|++++++|+.+++++++.++|+|++
T Consensus        47 ~~~~dv~~~~~~~~~~~~~~~------~~G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~  120 (252)
T d1zmta1          47 YPQLKPMSEQEPAELIEAVTS------AYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKK  120 (252)
T ss_dssp             CTTSEECCCCSHHHHHHHHHH------HHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             EEEeccCCHHHHHHHHHHHHH------HcCCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcc
Confidence            457999999999999999999      568999999999975   35567889999999999999999999999999998


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCc
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV  171 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~  171 (266)
                      ++ .|+||++||..+.                    .+.+...+|+++|+++..|+++||.+++   ++||+||+|+||+
T Consensus       121 ~~-~G~IV~isS~~~~--------------------~~~~~~~~Y~asKaal~~lt~~lA~ela---~~gIrVN~I~PG~  176 (252)
T d1zmta1         121 RK-SGHIIFITSATPF--------------------GPWKELSTYTSARAGACTLANALSKELG---EYNIPVFAIGPNY  176 (252)
T ss_dssp             HT-CCEEEEECCSTTT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCCEEEEEESS
T ss_pred             cc-cceeecccccccc--------------------cccccccccccccccHHHHHHHHHHHhc---ccCcEEEEEecCC
Confidence            87 8999999999873                    4677788999999999999999999998   8999999999999


Q ss_pred             ccCCccCcchhHH-------HHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC---CcccceeecCCCccc
Q 024553          172 VKTNIMREVPSFL-------SLMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTV  231 (266)
Q Consensus       172 v~T~~~~~~~~~~-------~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~---~~~G~~~~~~~g~~~  231 (266)
                      |+|++........       .........|++|+.+|+|+|+.++  ||+++   ..+|+.+..++|-.+
T Consensus       177 i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~--fL~S~~s~~iTG~~i~vdGG~~~  244 (252)
T d1zmta1         177 LHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVA--FLASGSCDYLTGQVFWLAGGFPM  244 (252)
T ss_dssp             BCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHH--HHHTTSCGGGTTCEEEESTTCCC
T ss_pred             CcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHH--HHhCchhcCCcCCeEEECCCcee
Confidence            9999887643211       1222344457889999999999999  45554   357999988888654

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.97  E-value=8.5e-32  Score=221.34  Aligned_cols=192  Identities=18%  Similarity=0.217  Sum_probs=148.5

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC------CCCcCCCcccchhhhhhhhhHHHHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTK   83 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~------~~~~~~~~~~~~~~~~n~~~~~~l~~   83 (266)
                      ..++.++.||+++.++++++++++.+      +++++|+||||||+..      +..+.+.|+|+++|++|+.|++++++
T Consensus        56 ~~~~~~~~~Dvt~~~~v~~~~~~~~~------~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~  129 (264)
T d1spxa_          56 EQNVNSVVADVTTDAGQDEILSTTLG------KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTK  129 (264)
T ss_dssp             GGGEEEEECCTTSHHHHHHHHHHHHH------HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHH
T ss_pred             cCceEEEEccCCCHHHHHHHHHHHHH------HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHh
Confidence            45799999999999999999999998      5689999999999863      23455778999999999999999999


Q ss_pred             hhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeE
Q 024553           84 LLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVS  163 (266)
Q Consensus        84 ~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~  163 (266)
                      .++|+|++++  +++|+++|+.+.                   ..+.+...+|+++|+++..|+++||.+++   +.||+
T Consensus       130 ~~~p~m~~~~--g~iI~~~S~~~~-------------------~~~~~~~~~Y~asKaal~~lt~~lA~el~---~~gIr  185 (264)
T d1spxa_         130 KAVPHLSSTK--GEIVNISSIASG-------------------LHATPDFPYYSIAKAAIDQYTRNTAIDLI---QHGIR  185 (264)
T ss_dssp             HHHHHHHHHT--CEEEEECCTTSS-------------------SSCCTTSHHHHHHHHHHHHHHHHHHHHHG---GGTCE
T ss_pred             hhCCcccccc--Ccceeeeeeccc-------------------cccCCCchhhhhhhhhHHHHHHHHHHHhc---ccCeE
Confidence            9999998764  677777776541                   23667788899999999999999999998   88999


Q ss_pred             EEEecCCcccCCccCcchhHH--------HHHHHHHHHHhhcCCCHHHHHHHHHHHhcC--CCCcccceeecCCCccc
Q 024553          164 VIAADPGVVKTNIMREVPSFL--------SLMAFTVLKLLGLLQSPEKGINSVLDAALA--PPETSGVYFFGGKGRTV  231 (266)
Q Consensus       164 v~~v~PG~v~T~~~~~~~~~~--------~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~--~~~~~G~~~~~~~g~~~  231 (266)
                      ||+|+||+|+|++........        .........|++|+.+|+|+|+.+++++-.  +...+|..+..++|..+
T Consensus       186 VN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~sl  263 (264)
T d1spxa_         186 VNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSL  263 (264)
T ss_dssp             EEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             EEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCCccCceEEeCCChhh
Confidence            999999999999876542211        111223345788999999999999954421  23468998888888654

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.97  E-value=1.6e-31  Score=220.70  Aligned_cols=194  Identities=18%  Similarity=0.145  Sum_probs=157.5

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--C--CCcCCCcccchhhhhhhhhHHHHHHhh
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--T--SSRLTPEGYDQMMSTNYIGAFFLTKLL   85 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~--~~~~~~~~~~~~~~~n~~~~~~l~~~~   85 (266)
                      ..++.++.||++++++++++++++.+      +++++|++|||||...  +  ..+.+.|+|++++++|+.+++.+++.+
T Consensus        55 ~~~~~~~~~Dv~~~~~v~~~~~~~~~------~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~  128 (274)
T d1xhla_          55 AEKINAVVADVTEASGQDDIINTTLA------KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKT  128 (274)
T ss_dssp             GGGEEEEECCTTSHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             CcceEEEEeeCCCHHHHHHHHHHHHH------HcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccc
Confidence            45799999999999999999999999      5689999999999752  2  234577889999999999999999999


Q ss_pred             HHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEE
Q 024553           86 LPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVI  165 (266)
Q Consensus        86 ~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~  165 (266)
                      +|+|++++ .++|+++||.++                    ..+.++..+|+++|+++..|++++|.+++   +.||+||
T Consensus       129 ~~~m~~~~-~g~ii~~ss~~~--------------------~~~~~~~~~Y~asKaal~~ltk~lA~ela---~~gIrVN  184 (274)
T d1xhla_         129 KEHLIKTK-GEIVNVSSIVAG--------------------PQAHSGYPYYACAKAALDQYTRCTAIDLI---QHGVRVN  184 (274)
T ss_dssp             HHHHHHTT-CEEEEECCGGGS--------------------SSCCTTSHHHHHHHHHHHHHHHHHHHHHG---GGTCEEE
T ss_pred             cccccccc-cccccchhhhhc--------------------cccCCCCceehhhhhHHHHHHHHHHHHHh---HhCCcee
Confidence            99999877 788888888775                    34667788999999999999999999998   8999999


Q ss_pred             EecCCcccCCccCcchhH----HHHHHH----HHHHHhhcCCCHHHHHHHHHHHhc--CCCCcccceeecCCCccccC
Q 024553          166 AADPGVVKTNIMREVPSF----LSLMAF----TVLKLLGLLQSPEKGINSVLDAAL--APPETSGVYFFGGKGRTVNS  233 (266)
Q Consensus       166 ~v~PG~v~T~~~~~~~~~----~~~~~~----~~~~~~~~~~~p~~~a~~~~~~~~--~~~~~~G~~~~~~~g~~~~~  233 (266)
                      +|+||+|+|++.......    .....+    ....|++|+.+|+|+|+.+++++-  .+...+|..+..++|..+..
T Consensus       185 ~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~~l~~  262 (274)
T d1xhla_         185 SVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVM  262 (274)
T ss_dssp             EEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCC
T ss_pred             eeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCCccccCccCcEEEeCcCHHHhc
Confidence            999999999987543211    111111    112378899999999999995442  12357899999899987653

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=4.4e-32  Score=219.98  Aligned_cols=191  Identities=24%  Similarity=0.302  Sum_probs=154.9

Q ss_pred             hhcccCCCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHH
Q 024553            3 DITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFF   80 (266)
Q Consensus         3 ~i~~~~~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~   80 (266)
                      ++.++.+  .+.++.||+++.++++++++          +++++|+||||||+.  .++.+++.++|++++++|+.++++
T Consensus        44 ~~~~~~~--~~~~~~~Dv~~~~~v~~~~~----------~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~  111 (242)
T d1cyda_          44 SLAKECP--GIEPVCVDLGDWDATEKALG----------GIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQ  111 (242)
T ss_dssp             HHHHHST--TCEEEECCTTCHHHHHHHHT----------TCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHH
T ss_pred             HHHHhcC--CCeEEEEeCCCHHHHHHHHH----------HcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchH
Confidence            3444443  46789999999999877653          568999999999986  356788999999999999999999


Q ss_pred             HHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCC
Q 024553           81 LTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSR  160 (266)
Q Consensus        81 l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~  160 (266)
                      +++.++|.|.++..+|+||+++|..+                    ..+.+...+|+++|+++..|+++++.+++   +.
T Consensus       112 ~~~~~~~~~~~~~~~g~ii~isS~~~--------------------~~~~~~~~~Y~asKaal~~lt~~lA~e~~---~~  168 (242)
T d1cyda_         112 VSQMVARDMINRGVPGSIVNVSSMVA--------------------HVTFPNLITYSSTKGAMTMLTKAMAMELG---PH  168 (242)
T ss_dssp             HHHHHHHHHHHHTCCEEEEEECCGGG--------------------TSCCTTBHHHHHHHHHHHHHHHHHHHHHG---GG
T ss_pred             HHHHhchhhhhhcccCcccccchhhc--------------------cccCCccccccchHHHHHHHHHHHHHHhC---cc
Confidence            99999998765443789999999887                    34677888999999999999999999998   89


Q ss_pred             CeEEEEecCCcccCCccCcchh-HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC---CcccceeecCCCcc
Q 024553          161 HVSVIAADPGVVKTNIMREVPS-FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRT  230 (266)
Q Consensus       161 ~i~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~---~~~G~~~~~~~g~~  230 (266)
                      ||+||+|+||+|+|++...... ...........|++|+.+|+|+|+.+++  |.++   ..+|+.+..++|-.
T Consensus       169 gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeva~~v~f--L~S~~s~~itG~~i~vDGG~~  240 (242)
T d1cyda_         169 KIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILF--LLSDRSASTSGGGILVDAGYL  240 (242)
T ss_dssp             TEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHH--HHSGGGTTCCSSEEEESTTGG
T ss_pred             CeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCCCCcCHHHHHHHHHH--HhCchhcCcCCceEEeCcchh
Confidence            9999999999999998765432 2222333445678899999999999995  4444   45799888777743

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.97  E-value=7.3e-32  Score=221.23  Aligned_cols=197  Identities=20%  Similarity=0.206  Sum_probs=160.4

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||++++++++++++++.+      +++++|+||||||+.  .+..+++.++|++++++|+.|++++++.++|
T Consensus        58 g~~~~~~~~Dv~~~~~v~~~~~~~~~------~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  131 (260)
T d1h5qa_          58 GVKTKAYQCDVSNTDIVTKTIQQIDA------DLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAK  131 (260)
T ss_dssp             TCCEEEEECCTTCHHHHHHHHHHHHH------HSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCceEEEEccCCCHHHHHHHHHHHHH------HhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcc
Confidence            45789999999999999999999999      679999999999987  3567889999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|.++...++|++++|..........             ..+.++..+|+++|+++..+++++|.+++   ++|||||+|
T Consensus       132 ~m~~~~~~g~i~~~~s~~~~~~~~~~-------------~~~~~~~~~Y~asKaal~~lt~~lA~el~---~~gIrvN~I  195 (260)
T d1h5qa_         132 LWLQKQQKGSIVVTSSMSSQIINQSS-------------LNGSLTQVFYNSSKAACSNLVKGLAAEWA---SAGIRVNAL  195 (260)
T ss_dssp             HHHHHTCCEEEEEECCGGGTSCCEEE-------------TTEECSCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEE
T ss_pred             cccccccceEEEEeeccccccccccc-------------cccCccccchhhhhhhHHHHHHHHHHHhc---hhCeEEeec
Confidence            98655447788888887653211100             11234567899999999999999999998   899999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC---CcccceeecCCCccc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTV  231 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~---~~~G~~~~~~~g~~~  231 (266)
                      +||+|+|++.....+.. ........|++|+.+|+|+|+.+++  |+++   ..+|..+..++|..+
T Consensus       196 ~PG~i~T~~~~~~~~~~-~~~~~~~~pl~R~g~pedvA~~v~f--L~S~~s~~itG~~i~VDGG~~~  259 (260)
T d1h5qa_         196 SPGYVNTDQTAHMDKKI-RDHQASNIPLNRFAQPEEMTGQAIL--LLSDHATYMTGGEYFIDGGQLI  259 (260)
T ss_dssp             EECSBCCGGGGGSCHHH-HHHHHHTCTTSSCBCGGGGHHHHHH--HHSGGGTTCCSCEEEECTTGGG
T ss_pred             CCCcccCcchhccCHHH-HHHHHhcCCCCCCcCHHHHHHHHHH--HhcchhCCCcCceEEECCCeec
Confidence            99999999988765432 2223344578899999999999994  4454   358999988888765

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.97  E-value=1.5e-31  Score=220.76  Aligned_cols=195  Identities=20%  Similarity=0.208  Sum_probs=153.7

Q ss_pred             CCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCC--C----CcCCCcccchhhhhhhhhHHHHH
Q 024553            9 KDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT--S----SRLTPEGYDQMMSTNYIGAFFLT   82 (266)
Q Consensus         9 ~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~--~----~~~~~~~~~~~~~~n~~~~~~l~   82 (266)
                      .+.++.+++||++++++++++++++.+      +++++|+||||||...+  +    .+.+.+.|++++++|+.+++.++
T Consensus        55 ~~~~~~~~~~Dvs~~~~v~~~~~~~~~------~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~  128 (272)
T d1xkqa_          55 SEKQVNSVVADVTTEDGQDQIINSTLK------QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMT  128 (272)
T ss_dssp             CGGGEEEEECCTTSHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHH
T ss_pred             CCCceEEEEccCCCHHHHHHHHHHHHH------HhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHH
Confidence            345799999999999999999999998      56899999999998742  2    24455679999999999999999


Q ss_pred             HhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCe
Q 024553           83 KLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHV  162 (266)
Q Consensus        83 ~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i  162 (266)
                      +.++|+|++++  +.+|+++|..+.                   ..+.+...+|+++|+++..|+++||.+++   ++||
T Consensus       129 ~~~~p~m~~~~--g~iI~~~Ss~a~-------------------~~~~~~~~~Y~asKaal~~ltk~lA~el~---~~gI  184 (272)
T d1xkqa_         129 KKVKPHLVASK--GEIVNVSSIVAG-------------------PQAQPDFLYYAIAKAALDQYTRSTAIDLA---KFGI  184 (272)
T ss_dssp             HHHHHHHHHHT--CEEEEECCGGGS-------------------SSCCCSSHHHHHHHHHHHHHHHHHHHHHH---TTTC
T ss_pred             HhhcccccccC--Cccccccchhcc-------------------ccCCCCcchhhhHHHHHHHHHHHHHHHhc---ccCe
Confidence            99999998754  566666664321                   34677888999999999999999999998   8999


Q ss_pred             EEEEecCCcccCCccCcchhHHH----HHHH----HHHHHhhcCCCHHHHHHHHHHHhcC--CCCcccceeecCCCcccc
Q 024553          163 SVIAADPGVVKTNIMREVPSFLS----LMAF----TVLKLLGLLQSPEKGINSVLDAALA--PPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       163 ~v~~v~PG~v~T~~~~~~~~~~~----~~~~----~~~~~~~~~~~p~~~a~~~~~~~~~--~~~~~G~~~~~~~g~~~~  232 (266)
                      +||+|+||+|+|++.........    ....    ....|++|+.+|+|+|+.+++++-.  +...+|+.+..++|..+.
T Consensus       185 rVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~l~  264 (272)
T d1xkqa_         185 RVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSLV  264 (272)
T ss_dssp             EEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             EEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHHHh
Confidence            99999999999998765422111    1111    1123678899999999999954321  234689999888988765


Q ss_pred             C
Q 024553          233 S  233 (266)
Q Consensus       233 ~  233 (266)
                      .
T Consensus       265 ~  265 (272)
T d1xkqa_         265 M  265 (272)
T ss_dssp             B
T ss_pred             c
Confidence            3

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.97  E-value=1.1e-32  Score=224.93  Aligned_cols=187  Identities=19%  Similarity=0.152  Sum_probs=154.0

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.+..++.||+++.++++++++++.+      +++++|+||||||+.  .++.+.+.++|+++|++|+.+++++++.++|
T Consensus        51 ~~~~~~~~~Dv~~~~~~~~~~~~~~~------~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~  124 (253)
T d1hxha_          51 GERSMFVRHDVSSEADWTLVMAAVQR------RLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIA  124 (253)
T ss_dssp             CTTEEEECCCTTCHHHHHHHHHHHHH------HHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCCeEEEEeecCCHHHHHHHHHHHHH------HhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHH
Confidence            45788999999999999999999998      568999999999987  3567889999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCC--CCeEEE
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKS--RHVSVI  165 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~--~~i~v~  165 (266)
                      +|+++  +|+||++||..+                    ..+.+...+|+++|+++..|++++|.+++   +  .+||||
T Consensus       125 ~m~~~--~G~Iv~isS~~~--------------------~~~~~~~~~Y~asKaal~~lt~~lA~e~~---~~g~~IrVN  179 (253)
T d1hxha_         125 AMKET--GGSIINMASVSS--------------------WLPIEQYAGYSASKAAVSALTRAAALSCR---KQGYAIRVN  179 (253)
T ss_dssp             HHTTT--CEEEEEECCGGG--------------------TSCCTTBHHHHHHHHHHHHHHHHHHHHHH---HHTCCEEEE
T ss_pred             HHHhc--CCceecccchhh--------------------hcCccccccccchhHHHHHHHHHHHHHHh---hcCCCEEEE
Confidence            99764  599999999987                    34677888999999999999999999986   4  469999


Q ss_pred             EecCCcccCCccCcchhH----HHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC---CcccceeecCCCc
Q 024553          166 AADPGVVKTNIMREVPSF----LSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGR  229 (266)
Q Consensus       166 ~v~PG~v~T~~~~~~~~~----~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~---~~~G~~~~~~~g~  229 (266)
                      +|+||+|+|++.....+.    ..........+++++.+|+|+|+.+++  |+++   ..+|+.+..++|-
T Consensus       180 ~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~f--L~S~~s~~itG~~i~VDGG~  248 (253)
T d1hxha_         180 SIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLF--LASDESSVMSGSELHADNSI  248 (253)
T ss_dssp             EEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHH--HHSGGGTTCCSCEEEESSSC
T ss_pred             EEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHHHHHHHHHH--HhChhhCCCcCcEEEECccH
Confidence            999999999986532111    111111223456778899999999994  4444   4589988877773

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.97  E-value=7.5e-31  Score=214.66  Aligned_cols=192  Identities=21%  Similarity=0.327  Sum_probs=155.7

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCC-CCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMH-SSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~-~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      +..++++.||+++.++++++++++.+      .+ +.+|+||||||...  +..+++.++|++++++|+.+++.+++.++
T Consensus        54 ~~~~~~~~~D~s~~~~~~~~~~~~~~------~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~  127 (258)
T d1ae1a_          54 GLNVEGSVCDLLSRTERDKLMQTVAH------VFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAY  127 (258)
T ss_dssp             TCCEEEEECCTTCHHHHHHHHHHHHH------HTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CCCceEEEeecCCHHHHHHHHHHHHH------HhCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccc
Confidence            45688999999999999999999998      44 67999999999873  56778999999999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |.|+++. .|+||+++|..+                    ..+.+...+|+++|+++..|++.+|++++   +.+|+||+
T Consensus       128 ~~m~~~~-~g~ii~isS~~~--------------------~~~~~~~~~Y~~sK~al~~lt~~lA~el~---~~gIrvN~  183 (258)
T d1ae1a_         128 PLLKASQ-NGNVIFLSSIAG--------------------FSALPSVSLYSASKGAINQMTKSLACEWA---KDNIRVNS  183 (258)
T ss_dssp             HHHHHHT-SEEEEEECCGGG--------------------TSCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEE
T ss_pred             ccccccc-cccccccccccc--------------------ccccccchhHHHHHHHHHHHHHHHHHhcC---cCcEEEEE
Confidence            9999887 899999999997                    44778889999999999999999999998   88999999


Q ss_pred             ecCCcccCCccCcchhH-----HHHHHHHHHHHhhcCCCHHHHHHHHHHHhc-CCCCcccceeecCCCccc
Q 024553          167 ADPGVVKTNIMREVPSF-----LSLMAFTVLKLLGLLQSPEKGINSVLDAAL-APPETSGVYFFGGKGRTV  231 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~~-----~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~-~~~~~~G~~~~~~~g~~~  231 (266)
                      |+||+++|++.......     ..........|++|+.+|+|+|+.+++++- .+...+|..+..++|-..
T Consensus       184 I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~s~  254 (258)
T d1ae1a_         184 VAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASYITGQIIWADGGFTA  254 (258)
T ss_dssp             EEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             EeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCCCcCcEEEeCCCeec
Confidence            99999999987664222     223334445678899999999999995442 123458988877877654

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=9.9e-32  Score=218.25  Aligned_cols=190  Identities=22%  Similarity=0.243  Sum_probs=153.3

Q ss_pred             hhcccCCCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHH
Q 024553            3 DITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFF   80 (266)
Q Consensus         3 ~i~~~~~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~   80 (266)
                      ++.++.+  .+.++.+|+++.++++++++          +++++|+||||||+..  +..+.+.++|++++++|+.++++
T Consensus        46 ~~~~~~~--~~~~~~~Dv~d~~~v~~~~~----------~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~  113 (244)
T d1pr9a_          46 SLVRECP--GIEPVCVDLGDWEATERALG----------SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQ  113 (244)
T ss_dssp             HHHHHST--TCEEEECCTTCHHHHHHHHT----------TCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHH
T ss_pred             HHHHhcC--CCeEEEEeCCCHHHHHHHHH----------HhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhH
Confidence            3444443  46789999999999877663          5689999999999873  56788999999999999999999


Q ss_pred             HHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCC
Q 024553           81 LTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSR  160 (266)
Q Consensus        81 l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~  160 (266)
                      +++.++|.|.++...|+||+++|.++                    ..+.+...+|+++|+++..|++++|.+++   +.
T Consensus       114 ~~~~~~~~~~~~~~~g~Ii~isS~~~--------------------~~~~~~~~~Y~asKaal~~lt~~lA~el~---~~  170 (244)
T d1pr9a_         114 VSQIVARGLIARGVPGAIVNVSSQCS--------------------QRAVTNHSVYCSTKGALDMLTKVMALELG---PH  170 (244)
T ss_dssp             HHHHHHHHHHHHTCCEEEEEECCGGG--------------------TSCCTTBHHHHHHHHHHHHHHHHHHHHHG---GG
T ss_pred             HHHHhhhHHHHhCCcceEeecccccc--------------------cccccchhhhhhhHHHHHHHHHHHHHHhC---CC
Confidence            99999997654333799999999987                    34677788999999999999999999998   78


Q ss_pred             CeEEEEecCCcccCCccCcchhH-HHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC---CcccceeecCCCc
Q 024553          161 HVSVIAADPGVVKTNIMREVPSF-LSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGR  229 (266)
Q Consensus       161 ~i~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~---~~~G~~~~~~~g~  229 (266)
                      +|+||+|+||+|+|++....... ..........|++|+.+|+|+|+.+++  |.++   ..+|..+..++|-
T Consensus       171 gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~f--L~S~~a~~itG~~i~vDGG~  241 (244)
T d1pr9a_         171 KIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILF--LLSDRSGMTTGSTLPVEGGF  241 (244)
T ss_dssp             TEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCSCBCHHHHHHHHHH--HHSGGGTTCCSCEEEESTTG
T ss_pred             cEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHH--HhCchhCCcCCcEEEECccH
Confidence            99999999999999987654332 222223334577899999999999994  4444   4579888877764

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.97  E-value=4.1e-31  Score=214.19  Aligned_cols=188  Identities=19%  Similarity=0.205  Sum_probs=153.8

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.+++||++++++++++++++.+      .++++|+||||||..  .++.+++.+.|++++++|+.+++.+++.++|
T Consensus        50 ~~~~~~~~~Dls~~~~i~~~~~~i~~------~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~  123 (241)
T d2a4ka1          50 EAEAIAVVADVSDPKAVEAVFAEALE------EFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGE  123 (241)
T ss_dssp             CSSEEEEECCTTSHHHHHHHHHHHHH------HHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCceEEEEecCCCHHHHHHHHHHHHH------HhCCccEeccccccccccchhhhhcccccccccccccccccccccccc
Confidence            45789999999999999999999999      558999999999986  4567889999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++   .+.|+++||.+.                     ...++...|+++|++++.|+++||++++   +.||+||+|
T Consensus       124 ~~~~---~~~i~~~ss~a~---------------------~~~~~~~~Y~~sK~al~~lt~~lA~el~---~~gIrvN~I  176 (241)
T d2a4ka1         124 VLEE---GGSLVLTGSVAG---------------------LGAFGLAHYAAGKLGVVGLARTLALELA---RKGVRVNVL  176 (241)
T ss_dssp             HCCT---TCEEEEECCCTT---------------------CCHHHHHHHHHCSSHHHHHHHHHHHHHT---TTTCEEEEE
T ss_pred             cccc---ccceeecccccc---------------------ccccCccccchhhHHHHHHHHHHHHHHh---HhCCEEeee
Confidence            9876   456777766653                     3456788999999999999999999998   899999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCccc
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  231 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~~  231 (266)
                      +||+|+|++....++.. ........|++|+.+|+|+|+.+++++.. +...+|..+..++|..+
T Consensus       177 ~PG~v~T~~~~~~~~~~-~~~~~~~~p~~r~~~p~dva~~v~fL~S~~s~~itG~~i~vDGG~s~  240 (241)
T d2a4ka1         177 LPGLIQTPMTAGLPPWA-WEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALYVDGGRSI  240 (241)
T ss_dssp             EECSBCCGGGTTSCHHH-HHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             ccCcCCCHHHHhhhHhH-HHHHHhCCCCCCCcCHHHHHHHHHHHhcchhCCCcCceEEeCCCccc
Confidence            99999999988765433 33344456788999999999999954421 23458988888888653

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=3e-30  Score=211.60  Aligned_cols=196  Identities=18%  Similarity=0.156  Sum_probs=158.6

Q ss_pred             hhhcccCCCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCC-----CCcCCCcccchhhhhhhh
Q 024553            2 ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT-----SSRLTPEGYDQMMSTNYI   76 (266)
Q Consensus         2 ~~i~~~~~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~-----~~~~~~~~~~~~~~~n~~   76 (266)
                      ++|...+++.++.+++||++++++++++++++.+....  ..+.+|++|||||...+     ..+.+.++|+++|++|+.
T Consensus        51 ~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~~~~~--~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~  128 (259)
T d1oaaa_          51 EELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRP--EGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLT  128 (259)
T ss_dssp             HHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSCCC--TTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTH
T ss_pred             HHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHhhhh--ccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhh
Confidence            35666777889999999999999999999999773211  24678999999998632     346678899999999999


Q ss_pred             hHHHHHHhhHHHHhcCC-CCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhC
Q 024553           77 GAFFLTKLLLPLLKNSP-VPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLG  155 (266)
Q Consensus        77 ~~~~l~~~~~~~l~~~~-~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~  155 (266)
                      |++++++.++|+|++++ ..++||++||.++                    ..+.++...|+++|+++..|+++|+.+  
T Consensus       129 ~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~--------------------~~~~~~~~~Y~asKaal~~lt~~la~e--  186 (259)
T d1oaaa_         129 SMLCLTSGTLNAFQDSPGLSKTVVNISSLCA--------------------LQPYKGWGLYCAGKAARDMLYQVLAAE--  186 (259)
T ss_dssp             HHHHHHHHHHHTSCCCTTCEEEEEEECCGGG--------------------TSCCTTCHHHHHHHHHHHHHHHHHHHH--
T ss_pred             hhHHHHHHHHHHHHhcCCCcccccccccccc--------------------cCCCccchHHHHHHHHHHHHHHHHHhC--
Confidence            99999999999998764 2579999999987                    447788899999999999999999998  


Q ss_pred             CCCCCCeEEEEecCCcccCCccCcchh----HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceee
Q 024553          156 LDKSRHVSVIAADPGVVKTNIMREVPS----FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFF  224 (266)
Q Consensus       156 ~~~~~~i~v~~v~PG~v~T~~~~~~~~----~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~  224 (266)
                         .++|+||+|+||+|+|++......    ......+....+.+++.+|+++|+.+++++......+|.+++
T Consensus       187 ---~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~evA~~i~~ll~~~s~~TG~~id  256 (259)
T d1oaaa_         187 ---EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLLGLLQKDTFQSGAHVD  256 (259)
T ss_dssp             ---CTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHHHHHHHHCCSCTTEEEE
T ss_pred             ---CCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhhccCCCCCeEE
Confidence               469999999999999998754321    122233445567788999999999999776555567788776

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.6e-30  Score=210.55  Aligned_cols=183  Identities=20%  Similarity=0.256  Sum_probs=150.1

Q ss_pred             hhhcccCCCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHH
Q 024553            2 ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAF   79 (266)
Q Consensus         2 ~~i~~~~~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~   79 (266)
                      ++|.+.+++.+++++.||++++++++++++++.+      ++++||+||||||..  .+..+.+.++|+..+++|+.+++
T Consensus        52 ~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~------~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~  125 (257)
T d1xg5a_          52 AECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS------QHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALS  125 (257)
T ss_dssp             HHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH------HHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHH
T ss_pred             HHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHH------hcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHH
Confidence            3566666677999999999999999999999999      568999999999986  45778899999999999999999


Q ss_pred             HHHHhhHHHHhcCC-CCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhh--CC
Q 024553           80 FLTKLLLPLLKNSP-VPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNL--GL  156 (266)
Q Consensus        80 ~l~~~~~~~l~~~~-~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~--~~  156 (266)
                      ++++.++|.|++++ .+|+||+++|.++..                  ..+......|+.+|+++..|+++|+.++  . 
T Consensus       126 ~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~------------------~~p~~~~~~Y~~sKaal~~ltr~la~el~~~-  186 (257)
T d1xg5a_         126 ICTREAYQSMKERNVDDGHIININSMSGHR------------------VLPLSVTHFYSATKYAVTALTEGLRQELREA-  186 (257)
T ss_dssp             HHHHHHHHHHHHTTCCSCEEEEECCGGGTS------------------CCSCGGGHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             HHHHHHHHHHHHhccCCCceEEEechHhcC------------------CCCCcccHHHHHHHHHHHhCHHHHHHHHHhC-
Confidence            99999999998654 368999999988642                  1245566789999999999999999987  6 


Q ss_pred             CCCCCeEEEEecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHh
Q 024553          157 DKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAA  212 (266)
Q Consensus       157 ~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~  212 (266)
                        +++|+||+|+||.++|++........ ........+.+++.+|+|+|+++++++
T Consensus       187 --~~~I~vn~i~PG~i~t~~~~~~~~~~-~~~~~~~~~~~r~~~pedvA~~v~fL~  239 (257)
T d1xg5a_         187 --QTHIRATCISPGVVETQFAFKLHDKD-PEKAAATYEQMKCLKPEDVAEAVIYVL  239 (257)
T ss_dssp             --TCCCEEEEEEESCBCSSHHHHHTTTC-HHHHHHHHC---CBCHHHHHHHHHHHH
T ss_pred             --CCCEEEEEEeCCCCCChhhhhcChhh-HHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence              78999999999999999876543322 122333456678889999999999554

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.96  E-value=2.6e-30  Score=211.63  Aligned_cols=187  Identities=18%  Similarity=0.193  Sum_probs=150.2

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC------CCCcCCCcccchhhhhhhhhHHHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKL   84 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~------~~~~~~~~~~~~~~~~n~~~~~~l~~~   84 (266)
                      ....++.||++++++++++++++.+      .++++|+||||||+..      +..+.+.++|+..+++|+.+++.+++.
T Consensus        58 ~~~~~~~~D~~~~~~v~~~~~~~~~------~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~  131 (256)
T d1ulua_          58 GGALLFRADVTQDEELDALFAGVKE------AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARR  131 (256)
T ss_dssp             TCCEEEECCTTCHHHHHHHHHHHHH------HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             CcccccccccCCHHHHHHHHHHHHH------hcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHH
Confidence            3567899999999999999999998      5689999999999863      345667788999999999999999999


Q ss_pred             hHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEE
Q 024553           85 LLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSV  164 (266)
Q Consensus        85 ~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v  164 (266)
                      ++|+|++   +|+||+++|..+                    ..+.+...+|+++|+++..+++++|.+++   ++||+|
T Consensus       132 ~~~~~~~---~G~Iv~isS~~~--------------------~~~~~~~~~Y~asKaal~~ltr~lA~ela---~~gIrV  185 (256)
T d1ulua_         132 AEPLLRE---GGGIVTLTYYAS--------------------EKVVPKYNVMAIAKAALEASVRYLAYELG---PKGVRV  185 (256)
T ss_dssp             HTTTEEE---EEEEEEEECGGG--------------------TSBCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEE
T ss_pred             HHHHhcc---CCEEEEEeehHh--------------------cCCCCCchHHHHHHHHHHHHHHHHHHHhc---ccCCEE
Confidence            9999987   579999999987                    34677788999999999999999999998   889999


Q ss_pred             EEecCCcccCCccCcchhHH-HHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC---CcccceeecCCCccc
Q 024553          165 IAADPGVVKTNIMREVPSFL-SLMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTV  231 (266)
Q Consensus       165 ~~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~---~~~G~~~~~~~g~~~  231 (266)
                      |+|+||+|+|++....+... .........|++|+.+|+|+|+.++  ||.++   ..+|..+..++|-.+
T Consensus       186 N~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~--fL~S~~s~~itG~~i~VDGG~~~  254 (256)
T d1ulua_         186 NAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGL--FLLSPLASGITGEVVYVDAGYHI  254 (256)
T ss_dssp             EEEEECCC----------CHHHHHHHHHHSTTSSCCCHHHHHHHHH--HHHSGGGTTCCSCEEEESTTGGG
T ss_pred             eeeccceeeeccccchhhhHHHHHHHHhcCCCCCCcCHHHHHHHHH--HHhCchhCCccCCeEEECcCEeC
Confidence            99999999999887654322 2233444567889999999999999  44444   458998888888654

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.96  E-value=3.1e-30  Score=211.38  Aligned_cols=187  Identities=22%  Similarity=0.250  Sum_probs=154.9

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.+++++.||+++.++++++++++.+      ++++||++|||||..  .+..+.+.+.|+++|++|+.+++.+++.++|
T Consensus        55 g~~~~~~~~D~~~~~~v~~~~~~~~~------~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  128 (259)
T d1ja9a_          55 GAQGVAIQADISKPSEVVALFDKAVS------HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLK  128 (259)
T ss_dssp             TCCEEEEECCTTSHHHHHHHHHHHHH------HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCCceEecCCCCCHHHHHHHHHHHHH------HcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhh
Confidence            45789999999999999999999999      568999999999987  3556788999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++   .+++++++|..+.                   ..+.+....|+++|+++..++++||++++   +.+|+||+|
T Consensus       129 ~m~~---~g~~iii~s~~~~-------------------~~~~~~~~~Y~asK~al~~l~r~lA~e~~---~~gIrvN~I  183 (259)
T d1ja9a_         129 HCRR---GGRIILTSSIAAV-------------------MTGIPNHALYAGSKAAVEGFCRAFAVDCG---AKGVTVNCI  183 (259)
T ss_dssp             HEEE---EEEEEEECCGGGT-------------------CCSCCSCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEE
T ss_pred             hhhc---CCccccccccccc-------------------ccCCCCchhHHHHHHHHHHHHHHHHHHHh---hcCeEEecc
Confidence            9987   4688888887652                   23567788999999999999999999998   889999999


Q ss_pred             cCCcccCCccCcc------------hhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC---CcccceeecCCCc
Q 024553          168 DPGVVKTNIMREV------------PSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGR  229 (266)
Q Consensus       168 ~PG~v~T~~~~~~------------~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~---~~~G~~~~~~~g~  229 (266)
                      +||+++|++.+..            .............|++|+.+|+|+|+.++  +|+++   ..+|..+..++|.
T Consensus       184 ~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eVa~~v~--fL~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         184 APGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVS--ALCQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             EECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHH--HHHSGGGTTCCSCEEEESTTC
T ss_pred             CcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHHHHHHHHH--HHhCchhcCCcCceEEeCCCC
Confidence            9999999875431            11122222344557889999999999999  55554   3589988888875

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.96  E-value=2.1e-30  Score=209.19  Aligned_cols=181  Identities=19%  Similarity=0.183  Sum_probs=148.4

Q ss_pred             EEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           13 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        13 ~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      ..++.||+++.  +    +.+.+      +++++|+||||||..  .+..+++.++|++++++|+.+++.+++.++|+|+
T Consensus        46 ~~~~~~Dv~~~--~----~~~~~------~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~  113 (234)
T d1o5ia_          46 HRYVVCDLRKD--L----DLLFE------KVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMK  113 (234)
T ss_dssp             SEEEECCTTTC--H----HHHHH------HSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             CcEEEcchHHH--H----HHHHH------HhCCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccc
Confidence            35788999864  3    34444      458899999999986  3567889999999999999999999999999999


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                      +++ .|+||+++|..+                    ..+.+....|+++|+++..|++++|.+++   +.||+||+|+||
T Consensus       114 ~~~-~G~ii~i~S~~~--------------------~~~~~~~~~Y~asKaal~~ltk~lA~ela---~~gIrVN~I~PG  169 (234)
T d1o5ia_         114 EKG-WGRIVAITSFSV--------------------ISPIENLYTSNSARMALTGFLKTLSFEVA---PYGITVNCVAPG  169 (234)
T ss_dssp             HHT-CEEEEEECCGGG--------------------TSCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEEC
T ss_pred             ccc-cccccccccccc--------------------cccccccccchhHHHHHHHHHHHHHHHhc---ccCeEEeecccC
Confidence            877 899999999886                    34677788999999999999999999998   889999999999


Q ss_pred             cccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC---CcccceeecCCCccc
Q 024553          171 VVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTV  231 (266)
Q Consensus       171 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~---~~~G~~~~~~~g~~~  231 (266)
                      +++|++.................|++|+.+|+|+|+.+++  |+++   ..+|+.+..++|-..
T Consensus       170 ~v~T~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~f--L~S~~s~~itG~~i~vDGG~s~  231 (234)
T d1o5ia_         170 WTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAF--LCSEKASYLTGQTIVVDGGLSK  231 (234)
T ss_dssp             SBCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHHH--HHSGGGTTCCSCEEEESTTCCC
T ss_pred             ccchhhhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHH--HhChhhcCCcCcEEEECccccc
Confidence            9999987664433333333445678899999999999994  4444   457999888887543

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=8.8e-30  Score=211.28  Aligned_cols=175  Identities=22%  Similarity=0.262  Sum_probs=141.3

Q ss_pred             CCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553            9 KDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus         9 ~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      .+.++.++.||+++.+++.++++++.+        +.+|+||||||..  .+..+.+.++|+++|++|+.|++++++.++
T Consensus        55 ~~~~~~~~~~Dv~~~~~~~~~~~~~~~--------g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~l  126 (285)
T d1jtva_          55 PPGSLETLQLDVRDSKSVAAARERVTE--------GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFL  126 (285)
T ss_dssp             CTTSEEEEECCTTCHHHHHHHHHTCTT--------SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             cCCceEEEeccccchHhhhhhhhhccc--------cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHH
Confidence            356899999999999999999987743        7899999999987  356678999999999999999999999999


Q ss_pred             HHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           87 PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        87 ~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                      |+|++++ .|+||++||.++                    ..+.+....|+++|+++..|+++|+.+++   +.||+||+
T Consensus       127 p~m~~~~-~G~Iv~isS~~g--------------------~~~~~~~~~Y~asKaal~~l~~~la~El~---~~gIrVn~  182 (285)
T d1jtva_         127 PDMKRRG-SGRVLVTGSVGG--------------------LMGLPFNDVYCASKFALEGLCESLAVLLL---PFGVHLSL  182 (285)
T ss_dssp             HHHHHHT-CEEEEEEEEGGG--------------------TSCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEE
T ss_pred             HHHHHcC-CCceEEEechhh--------------------cCCCCCchHHHHHHHHHHHHHHHHHHHhh---ccCcEEEE
Confidence            9999877 899999999987                    34677888999999999999999999998   88999999


Q ss_pred             ecCCcccCCccCcchhH-------------HHH---HHHHHHHHhhcCCCHHHHHHHHHHHhcCC
Q 024553          167 ADPGVVKTNIMREVPSF-------------LSL---MAFTVLKLLGLLQSPEKGINSVLDAALAP  215 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~~-------------~~~---~~~~~~~~~~~~~~p~~~a~~~~~~~~~~  215 (266)
                      |+||+|+|++.......             .+.   .......+.++..+|+|+|+.+++++..+
T Consensus       183 V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PeeVA~~v~~~~~~~  247 (285)
T d1jtva_         183 IECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFLTALRAP  247 (285)
T ss_dssp             EEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHHHHHHHHHCS
T ss_pred             EecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHHhCC
Confidence            99999999998653210             011   11112233456779999999999876554

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.96  E-value=7.2e-30  Score=207.96  Aligned_cols=183  Identities=19%  Similarity=0.257  Sum_probs=144.4

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC---CCCcCCCcccchhhhhhhhhHHHHHHhhH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLL   86 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   86 (266)
                      +.++.++.||++++++++++++++++..    .++++|+||||||+..   +..+.+.++|++++++|+.|++.+++.++
T Consensus        52 ~~~~~~~~~Dvs~~~~v~~~~~~i~~~~----~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~  127 (248)
T d1snya_          52 HSNIHILEIDLRNFDAYDKLVADIEGVT----KDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACL  127 (248)
T ss_dssp             CTTEEEEECCTTCGGGHHHHHHHHHHHH----GGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CCcEEEEEEEeccHHHHHHHHhhhHHHh----hcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHH
Confidence            3479999999999999999999986532    3578999999999864   34567888899999999999999999999


Q ss_pred             HHHhcC----------CCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCC
Q 024553           87 PLLKNS----------PVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGL  156 (266)
Q Consensus        87 ~~l~~~----------~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~  156 (266)
                      |+|+++          ...+++|+++|..+...                 ..+.++..+|++||+++..|+++++.++. 
T Consensus       128 p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~-----------------~~~~~~~~~Y~aSKaal~~lt~~la~e~~-  189 (248)
T d1snya_         128 PLLKKAAKANESQPMGVGRAAIINMSSILGSIQ-----------------GNTDGGMYAYRTSKSALNAATKSLSVDLY-  189 (248)
T ss_dssp             HHHHHHHHHTTTSCSSTTTCEEEEECCGGGCST-----------------TCCSCCCHHHHHHHHHHHHHHHHHHHHHG-
T ss_pred             HHHHHhhhccccccccccccccccccccccccC-----------------CCCCCChHHHHHHHHHHHHHHHHHHHHhC-
Confidence            999853          12689999999886431                 23456677899999999999999999998 


Q ss_pred             CCCCCeEEEEecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc-CCCCcccceeecCCCccccC
Q 024553          157 DKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAAL-APPETSGVYFFGGKGRTVNS  233 (266)
Q Consensus       157 ~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~-~~~~~~G~~~~~~~g~~~~~  233 (266)
                        +.+|+||+|+||+|+|++.....+.                ++++.++.++.++. ..+..+|+|++. +|+.++|
T Consensus       190 --~~gI~vn~v~PG~v~T~m~~~~~~~----------------~~~~~~~~i~~~i~~l~~~~tG~~i~~-dG~~ipW  248 (248)
T d1snya_         190 --PQRIMCVSLHPGWVKTDMGGSSAPL----------------DVPTSTGQIVQTISKLGEKQNGGFVNY-DGTPLAW  248 (248)
T ss_dssp             --GGTCEEEEECCCSBCSTTTCTTCSB----------------CHHHHHHHHHHHHHHCCGGGTTCEECT-TSCBCCC
T ss_pred             --CCCeEEEEcCCCcccCCcccccCCC----------------CchHHHHHHHHHHHhcCccCCCcEEEE-CCeEcCC
Confidence              7899999999999999998764331                33333444443333 234568999974 6777765

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.96  E-value=2.9e-30  Score=210.67  Aligned_cols=190  Identities=19%  Similarity=0.257  Sum_probs=152.7

Q ss_pred             hhcccCCCccEEEEEecCC-CHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHH
Q 024553            3 DITSRNKDARLEAFQVDLS-SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL   81 (266)
Q Consensus         3 ~i~~~~~~~~~~~i~~Dls-~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l   81 (266)
                      ++....++.++.++.||++ +.++++++++++.+      ++++||+||||||..      +.++|++++++|++|++++
T Consensus        47 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~------~~g~iDilvnnAG~~------~~~~~~~~~~vNl~g~~~~  114 (254)
T d1sbya1          47 ELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD------QLKTVDILINGAGIL------DDHQIERTIAINFTGLVNT  114 (254)
T ss_dssp             HHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH------HHSCCCEEEECCCCC------CTTCHHHHHHHHTHHHHHH
T ss_pred             HHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH------HcCCCCEEEeCCCCC------CHHHHHHHHHHHhHHHHHH
Confidence            4555667778999999998 67889999999999      558999999999974      5688999999999999999


Q ss_pred             HHhhHHHHhcCC--CCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCC
Q 024553           82 TKLLLPLLKNSP--VPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKS  159 (266)
Q Consensus        82 ~~~~~~~l~~~~--~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~  159 (266)
                      ++.++|+|.++.  ..|+||+++|.++                    ..+.++...|+++|+++..|+++|+.++.   +
T Consensus       115 ~~~~~~~m~~~~~~~~g~Ii~isS~~~--------------------~~~~~~~~~Y~asKaal~~~t~~la~el~---~  171 (254)
T d1sbya1         115 TTAILDFWDKRKGGPGGIIANICSVTG--------------------FNAIHQVPVYSASKAAVVSFTNSLAKLAP---I  171 (254)
T ss_dssp             HHHHHHHHCGGGTCCCEEEEEECCGGG--------------------TSCCTTSHHHHHHHHHHHHHHHHHHHHHH---H
T ss_pred             HHHHHHHhhhcccCCCceEEEEechhh--------------------ccCCCCCHHHHHHHHHHHHHHHHHHhhcc---c
Confidence            999999997642  3689999999997                    34677888999999999999999999997   7


Q ss_pred             CCeEEEEecCCcccCCccCcchhHHHHHHHHHHHH-hhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCc
Q 024553          160 RHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL-LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGR  229 (266)
Q Consensus       160 ~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~  229 (266)
                      .+|+||+|+||+|+|++.+...............+ .++..+|+++|+.++.++..  ..+|..+..++|.
T Consensus       172 ~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~~~~~--~~tG~vi~vdgG~  240 (254)
T d1sbya1         172 TGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEA--NKNGAIWKLDLGT  240 (254)
T ss_dssp             HSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHHH--CCTTCEEEEETTE
T ss_pred             cCeEEEEEEeCCCcCccccccccchhHHHHHHhccccCCCCCHHHHHHHHHHhhhC--CCCCCEEEECCCE
Confidence            89999999999999998765432211111111122 23456899999999865533  3589988878885

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=9.3e-30  Score=206.17  Aligned_cols=169  Identities=22%  Similarity=0.315  Sum_probs=144.8

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.+++++.||+++.++++++++++.+      +++++|++|||||...  +..+.+.+.|+++|++|+.|++++++.++|
T Consensus        55 ~~~~~~~~~Dvs~~~~v~~~~~~i~~------~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp  128 (244)
T d1yb1a_          55 GAKVHTFVVDCSNREDIYSSAKKVKA------EIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLP  128 (244)
T ss_dssp             TCCEEEEECCTTCHHHHHHHHHHHHH------HTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCcEEEEEeeCCCHHHHHHHHHHHHH------HcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhh
Confidence            45799999999999999999999998      6789999999999873  456778889999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .|++++ .|+||++||.++                    ..+.+++.+|+++|+|+..|+++|+.+++.....||+|+.|
T Consensus       129 ~m~~~~-~G~Iv~isS~~~--------------------~~~~~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i  187 (244)
T d1yb1a_         129 AMTKNN-HGHIVTVASAAG--------------------HVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCL  187 (244)
T ss_dssp             HHHHTT-CEEEEEECCCC---------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEE
T ss_pred             hHHhcC-CceEEEeecchh--------------------cCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEE
Confidence            999987 899999999998                    44778889999999999999999999975111368999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP  216 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~  216 (266)
                      +||+|+|++.+....           ......+|+++|+.++..+...+
T Consensus       188 ~PG~v~T~~~~~~~~-----------~~~~~~~pe~va~~i~~~~~~~~  225 (244)
T d1yb1a_         188 CPNFVNTGFIKNPST-----------SLGPTLEPEEVVNRLMHGILTEQ  225 (244)
T ss_dssp             EETHHHHCSTTCTHH-----------HHCCCCCHHHHHHHHHHHHHTTC
T ss_pred             EcCCCCChhhhCcCc-----------cccCCCCHHHHHHHHHHHHhcCC
Confidence            999999999876321           22355699999999997766543

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.96  E-value=7.9e-30  Score=210.69  Aligned_cols=196  Identities=17%  Similarity=0.148  Sum_probs=154.2

Q ss_pred             hhcccCCCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCC-------CcCCCcccchhhhhhh
Q 024553            3 DITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS-------SRLTPEGYDQMMSTNY   75 (266)
Q Consensus         3 ~i~~~~~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~-------~~~~~~~~~~~~~~n~   75 (266)
                      ++.+.. +.++.++.||+++.++++++++++.+      +++++|++|||||+....       .+.+.+.|+++|++|+
T Consensus        44 ~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~------~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl  116 (276)
T d1bdba_          44 ELETDH-GDNVLGIVGDVRSLEDQKQAASRCVA------RFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINV  116 (276)
T ss_dssp             HHHHHH-GGGEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHT
T ss_pred             HHHHHc-CCCeeEEecccccHHHHHHHHHHHHH------HhCCcccccccccccCCCCccccccccchhhhhhHHHHHhh
Confidence            333333 45799999999999999999999999      568999999999986321       1222345999999999


Q ss_pred             hhHHHHHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhC
Q 024553           76 IGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLG  155 (266)
Q Consensus        76 ~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~  155 (266)
                      .|++++++.++|+|+++  +|+||+++|..+                    ..+.+...+|+++|+++..|++++|.+++
T Consensus       117 ~g~~~~~~~~~p~m~~~--~g~iI~i~S~~~--------------------~~~~~~~~~Y~asKaal~~ltr~lA~ela  174 (276)
T d1bdba_         117 KGYIHAVKACLPALVAS--RGNVIFTISNAG--------------------FYPNGGGPLYTAAKHAIVGLVRELAFELA  174 (276)
T ss_dssp             HHHHHHHHHHHHHHHHH--TCEEEEECCGGG--------------------TSTTSSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhc--CCCceeeeechh--------------------ccCCCCCchHHHHHHHHHHHHHHHHHHhh
Confidence            99999999999999875  489999999887                    34667788899999999999999999997


Q ss_pred             CCCCCCeEEEEecCCcccCCccCcchhHH---------HHHHHHHHHHhhcCCCHHHHHHHHHHHhc--CCCCcccceee
Q 024553          156 LDKSRHVSVIAADPGVVKTNIMREVPSFL---------SLMAFTVLKLLGLLQSPEKGINSVLDAAL--APPETSGVYFF  224 (266)
Q Consensus       156 ~~~~~~i~v~~v~PG~v~T~~~~~~~~~~---------~~~~~~~~~~~~~~~~p~~~a~~~~~~~~--~~~~~~G~~~~  224 (266)
                         + +|+||+|+||+|+|++........         .........|++|+.+|+|+|+.+++++.  .+...+|..+.
T Consensus       175 ---~-~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeva~~v~fL~S~~~a~~itG~~i~  250 (276)
T d1bdba_         175 ---P-YVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVFFATRGDAAPATGALLN  250 (276)
T ss_dssp             ---T-TCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGGGGSHHHHHHHCHHHHTTCSSCEEE
T ss_pred             ---c-ceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCcccCCeeCcEEE
Confidence               4 599999999999999875432211         01112223467899999999999995443  12357899999


Q ss_pred             cCCCccc
Q 024553          225 GGKGRTV  231 (266)
Q Consensus       225 ~~~g~~~  231 (266)
                      .++|-.+
T Consensus       251 VDGG~~~  257 (276)
T d1bdba_         251 YDGGLGV  257 (276)
T ss_dssp             ESSSGGG
T ss_pred             ECcChhh
Confidence            8888655

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.96  E-value=8.2e-30  Score=212.76  Aligned_cols=176  Identities=22%  Similarity=0.172  Sum_probs=148.9

Q ss_pred             EEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           13 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        13 ~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      ...+.+|+++.++++++++++.+      ++++||+||||||+.  .++.+++.++|++++++|+.|++++++.++|+|+
T Consensus        64 ~~~~~~d~~~~~~~~~~v~~~~~------~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~  137 (302)
T d1gz6a_          64 GGKAVANYDSVEAGEKLVKTALD------TFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMK  137 (302)
T ss_dssp             TCEEEEECCCGGGHHHHHHHHHH------HTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccchHHHHHHHHHHHHH------HcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHH
Confidence            45678999999999999999998      679999999999987  4577889999999999999999999999999999


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                      +++ .|+||++||..+.                    .+.++...|+++|+++..|+++|+.++.   ++||+||+|+||
T Consensus       138 ~~~-~G~IV~isS~~~~--------------------~~~~~~~~Y~asKaal~~lt~~la~E~~---~~gIrVN~I~PG  193 (302)
T d1gz6a_         138 KQN-YGRIIMTASASGI--------------------YGNFGQANYSAAKLGLLGLANTLVIEGR---KNNIHCNTIAPN  193 (302)
T ss_dssp             HHT-CEEEEEECCHHHH--------------------HCCTTCHHHHHHHHHHHHHHHHHHHHTG---GGTEEEEEEEEE
T ss_pred             hCC-CcEEEEeCChhhc--------------------CCCCCcHHHHHHHHHHHHHHHHHHHHHh---ccCCceeeeCCC
Confidence            887 8999999999874                    3567788999999999999999999998   899999999999


Q ss_pred             cccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCc
Q 024553          171 VVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGR  229 (266)
Q Consensus       171 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~  229 (266)
                      ++.|.+....+...           .+..+|+++|..+++++......+|..+..++|.
T Consensus       194 ~~~t~~~~~~~~~~-----------~~~~~PedvA~~v~fL~S~~a~itG~~i~vdGG~  241 (302)
T d1gz6a_         194 AGSRMTETVMPEDL-----------VEALKPEYVAPLVLWLCHESCEENGGLFEVGAGW  241 (302)
T ss_dssp             CCSTTTGGGSCHHH-----------HHHSCGGGTHHHHHHHTSTTCCCCSCEEEEETTE
T ss_pred             CCCcchhhcCcHhh-----------HhcCCHHHHHHHHHHHcCCCcCCCCcEEEeCCCc
Confidence            99888766554321           1234899999999954322224578887777774

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=7.7e-30  Score=210.90  Aligned_cols=202  Identities=25%  Similarity=0.326  Sum_probs=149.1

Q ss_pred             hhcccCCCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHH
Q 024553            3 DITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFF   80 (266)
Q Consensus         3 ~i~~~~~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~   80 (266)
                      +|.+.  +.++.++.||+++.++++++++++.+      ++++||+||||||+..  +..+.+.++|+.+|++|++|+++
T Consensus        47 ~l~~~--~~~~~~~~~Dvs~~~sv~~~~~~~~~------~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~  118 (275)
T d1wmaa1          47 QLQAE--GLSPRFHQLDIDDLQSIRALRDFLRK------EYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRD  118 (275)
T ss_dssp             HHHHT--TCCCEEEECCTTCHHHHHHHHHHHHH------HHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHH
T ss_pred             HHHhc--CCcEEEEEEecCCHHHHHHHHHHHHH------hcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHH
Confidence            45444  34688999999999999999999998      5689999999999874  34455667899999999999999


Q ss_pred             HHHhhHHHHhcCCCCCeEEEEcCCcccccccccC------------Ccccc---------ccCcccCCCCCChhhcchHh
Q 024553           81 LTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV------------NNETI---------TGKFFLRSKCYPCARIYEYS  139 (266)
Q Consensus        81 l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~------------~~~~~---------~~~~~~~~~~~~~~~~Y~~s  139 (266)
                      +++.++|+|++   .|+||+++|..+....+...            .....         ............+..+|+.|
T Consensus       119 l~~~~lp~m~~---~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~s  195 (275)
T d1wmaa1         119 VCTELLPLIKP---QGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVT  195 (275)
T ss_dssp             HHHHHGGGEEE---EEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHH
T ss_pred             HHHHHHHHHHh---cCCcccccccceeccccccchhhhhhhcccccchhhhccccccchhcccccccccCCCchHHHHHH
Confidence            99999999976   57999999987643211100            00000         00000001122334579999


Q ss_pred             HHHHHHHHHHHHHhhCCC-CCCCeEEEEecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCC-
Q 024553          140 KLCLLIFSYELHRNLGLD-KSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPE-  217 (266)
Q Consensus       140 K~~~~~~~~~la~~~~~~-~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~-  217 (266)
                      |+++..+++.+++++..+ ...+|+||+|+||+|+|++.+..                ...+|+++|+.++++...++. 
T Consensus       196 K~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~----------------~~~~pee~A~~~~~~a~~~~~~  259 (275)
T d1wmaa1         196 KIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK----------------ATKSPEEGAETPVYLALLPPDA  259 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTT----------------CSBCHHHHTHHHHHHHSCCTTC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCc----------------ccCCHHHHHHHHHHHHcCChhh
Confidence            999999999999887421 14699999999999999997653                234899999999988766653 


Q ss_pred             --cccceeecCCCccccC
Q 024553          218 --TSGVYFFGGKGRTVNS  233 (266)
Q Consensus       218 --~~G~~~~~~~g~~~~~  233 (266)
                        .+|+|+.  .++.++|
T Consensus       260 ~~~~G~~~~--~~~v~~w  275 (275)
T d1wmaa1         260 EGPHGQFVS--EKRVEQW  275 (275)
T ss_dssp             CCCCSCEEE--TTEEECC
T ss_pred             cCCCeEEEE--CCEEecC
Confidence              4799987  4455554

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.96  E-value=2.5e-29  Score=207.47  Aligned_cols=188  Identities=18%  Similarity=0.272  Sum_probs=155.0

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++++++.++++++.+      .++++|++|||+|..  .+..+.+.+.|++++++|+.+++.+++.++|
T Consensus        67 g~~~~~~~~D~~~~~~v~~~~~~~~~------~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~  140 (272)
T d1g0oa_          67 GSDAACVKANVGVVEDIVRMFEEAVK------IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYK  140 (272)
T ss_dssp             TCCEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCceeeEeCCCCCHHHHHHHHHHHHH------HhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccc
Confidence            45799999999999999999999998      568999999999987  3567788999999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++   .+++++++|+.+.                   ....+....|+++|++++.|++++|.+++   ++|||||+|
T Consensus       141 ~m~~---~g~~i~i~s~~~~-------------------~~~~~~~~~Y~asKaal~~ltk~lA~e~~---~~gIrVN~I  195 (272)
T d1g0oa_         141 HLEI---GGRLILMGSITGQ-------------------AKAVPKHAVYSGSKGAIETFARCMAIDMA---DKKITVNVV  195 (272)
T ss_dssp             HSCT---TCEEEEECCGGGT-------------------CSSCSSCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEE
T ss_pred             cccc---ccccccccccccc-------------------cccccchhhHHHHHHHHHHHHHHHHHHhc---hhCeEEEEE
Confidence            9987   5799999987753                   23566778899999999999999999998   889999999


Q ss_pred             cCCcccCCccCcchh------------HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC---CcccceeecCCCcc
Q 024553          168 DPGVVKTNIMREVPS------------FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRT  230 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~------------~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~---~~~G~~~~~~~g~~  230 (266)
                      +||+|+|++......            ...........|++|+.+|+|+|..+++  |.++   ..+|..+..++|..
T Consensus       196 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~f--L~s~~s~~itG~~i~vDGG~~  271 (272)
T d1g0oa_         196 APGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCF--LASNDGGWVTGKVIGIDGGAC  271 (272)
T ss_dssp             EECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHH--HHSGGGTTCCSCEEEESTTCC
T ss_pred             ccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHHHHHHHHH--HhCchhcCccCceEeECCCCC
Confidence            999999997644211            1111122334577899999999999995  4444   34899888888853

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.96  E-value=9.3e-29  Score=201.57  Aligned_cols=194  Identities=22%  Similarity=0.284  Sum_probs=143.0

Q ss_pred             hhhcccCCCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC---CCCcCCCcccchhhhhhhhhH
Q 024553            2 ADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGA   78 (266)
Q Consensus         2 ~~i~~~~~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~---~~~~~~~~~~~~~~~~n~~~~   78 (266)
                      +++.+.. +.+++++.||+++.++++++++++.+.+.    ...+|+||||||+..   +..+.+.++|+++|++|+.|+
T Consensus        43 ~~l~~~~-~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~----~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~  117 (250)
T d1yo6a1          43 TELKSIK-DSRVHVLPLTVTCDKSLDTFVSKVGEIVG----SDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSV  117 (250)
T ss_dssp             HHHHTCC-CTTEEEEECCTTCHHHHHHHHHHHHHHHG----GGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHH
T ss_pred             HHHHHhh-CCceEEEEEecCCHHHHHHHHHHHHHHhC----CCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhH
Confidence            3444433 45899999999999999999999988542    235999999999863   345677889999999999999


Q ss_pred             HHHHHhhHHHHhcCC----------CCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHH
Q 024553           79 FFLTKLLLPLLKNSP----------VPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSY  148 (266)
Q Consensus        79 ~~l~~~~~~~l~~~~----------~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~  148 (266)
                      +++++.++|+|+++.          ..+++++++|..+......             ......+..+|++||+++..|++
T Consensus       118 ~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~-------------~~~~~~~~~aY~aSKaal~~l~~  184 (250)
T d1yo6a1         118 VLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNT-------------SGSAQFPVLAYRMSKAAINMFGR  184 (250)
T ss_dssp             HHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCC-------------STTSSSCBHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCCc-------------ccccchhHHHHHHHHHHHHHHHH
Confidence            999999999997542          2478899888765331100             01233445679999999999999


Q ss_pred             HHHHhhCCCCCCCeEEEEecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC-CcccceeecCC
Q 024553          149 ELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGK  227 (266)
Q Consensus       149 ~la~~~~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~-~~~G~~~~~~~  227 (266)
                      +|+.+++   +.||+|++|+||+|+|+|.....                ..+|++.+..++..+...+ ..+|+||. .+
T Consensus       185 ~la~el~---~~gI~v~~i~PG~v~T~m~~~~~----------------~~~~e~~a~~~~~~~~~~~~~~sG~f~~-~~  244 (250)
T d1yo6a1         185 TLAVDLK---DDNVLVVNFCPGWVQTNLGGKNA----------------ALTVEQSTAELISSFNKLDNSHNGRFFM-RN  244 (250)
T ss_dssp             HHHHHTG---GGTCEEEEEECCCC-----------------------------HHHHHHHHHHHTTCCGGGTTCEEE-TT
T ss_pred             HHHHHhc---ccCeEEEEEecCCCCCCCCCCCC----------------CCCHHHHHHHHHHHHhcCCCCCCeEEEC-CC
Confidence            9999998   88999999999999999865421                1389999999998776544 56899987 56


Q ss_pred             CccccC
Q 024553          228 GRTVNS  233 (266)
Q Consensus       228 g~~~~~  233 (266)
                      |++.+|
T Consensus       245 g~p~~w  250 (250)
T d1yo6a1         245 LKPYEF  250 (250)
T ss_dssp             EEECCC
T ss_pred             CeeCCC
Confidence            777654

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.95  E-value=2.1e-28  Score=204.14  Aligned_cols=218  Identities=18%  Similarity=0.117  Sum_probs=166.2

Q ss_pred             hhcccCCCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHH
Q 024553            3 DITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFF   80 (266)
Q Consensus         3 ~i~~~~~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~   80 (266)
                      +|.+.+ +.++.++.||+++.++++++++.+.+      .++++|+||||||...  +....+.+++++++.+|+.+.+.
T Consensus        68 ~l~~~~-g~~~~~~~~D~~~~~~v~~~~~~~~~------~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~  140 (294)
T d1w6ua_          68 QISSQT-GNKVHAIQCDVRDPDMVQNTVSELIK------VAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAF  140 (294)
T ss_dssp             HHHHHH-SSCEEEEECCTTCHHHHHHHHHHHHH------HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhc-CCceEEEEecccChHHHHHHhhhhhh------hccccchhhhhhhhccccccccchhhhhhhheeeecccchh
Confidence            344444 45789999999999999999999998      6799999999999874  45667788899999999999999


Q ss_pred             HHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCC
Q 024553           81 LTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSR  160 (266)
Q Consensus        81 l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~  160 (266)
                      +.+...+.+......+.++.++|..+..                    ..+...+|+++|+++..|++++|.+++   +.
T Consensus       141 ~~~~~~~~~~~~~~~~~i~~~ss~~~~~--------------------~~~~~~~YsasKaal~~ltk~lA~ela---~~  197 (294)
T d1w6ua_         141 VTLEIGKQLIKAQKGAAFLSITTIYAET--------------------GSGFVVPSASAKAGVEAMSKSLAAEWG---KY  197 (294)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEECCTHHHH--------------------CCTTCHHHHHHHHHHHHHHHHHHHHHG---GG
T ss_pred             hhhhhhcccccccccccccccccchhhh--------------------cccccchHHHHHHHHHHHHHHHHHHHh---Hh
Confidence            9988888777655477888888887632                    566778899999999999999999998   88


Q ss_pred             CeEEEEecCCcccCCccCcchh--HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC---CcccceeecCCCccccCCc
Q 024553          161 HVSVIAADPGVVKTNIMREVPS--FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTVNSSA  235 (266)
Q Consensus       161 ~i~v~~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~---~~~G~~~~~~~g~~~~~~~  235 (266)
                      |||||+|+||+|+|++......  ...........|++|+.+|+|+|+.++  +|+++   ..+|..+..++|..+....
T Consensus       198 gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~--fL~sd~s~~itG~~i~vDGG~~l~~~~  275 (294)
T d1w6ua_         198 GMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAA--FLCSDYASWINGAVIKFDGGEEVLISG  275 (294)
T ss_dssp             TEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHH--HHTSGGGTTCCSCEEEESTTHHHHHHS
T ss_pred             CeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCCCCCCHHHHHHHHH--HHhCchhcCCCCcEEEECCChhheeCC
Confidence            9999999999999998765322  122233334457889999999999999  45454   4589999989997665544


Q ss_pred             cccCH-HHHHHHHHHHHH
Q 024553          236 LSFNS-KLAGELWTTSCN  252 (266)
Q Consensus       236 ~~~~~-~~~~~~~~~~~~  252 (266)
                      ...+. ...+..|+..++
T Consensus       276 ~~~~~~~~~~~~~~~~~~  293 (294)
T d1w6ua_         276 EFNDLRKVTKEQWDTIEE  293 (294)
T ss_dssp             TTGGGGGCCHHHHHHHTT
T ss_pred             CCCchhhcchhhhhhHhh
Confidence            44332 324555666543

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.1e-27  Score=194.31  Aligned_cols=186  Identities=16%  Similarity=0.191  Sum_probs=150.0

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      .+....+|+...+.++.+.+          ..+.+|+||||||...  +..+.+.+.|+..+++|+.+++.+++.++|+|
T Consensus        51 ~~~~~~~d~~~~~~~~~~~~----------~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~  120 (245)
T d2ag5a1          51 GIQTRVLDVTKKKQIDQFAN----------EVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKM  120 (245)
T ss_dssp             TEEEEECCTTCHHHHHHHHH----------HCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             CCceeeeecccccccccccc----------ccccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCccc
Confidence            47788999998776665543          3478999999999874  46788999999999999999999999999999


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      .+++ .|+||+++|..+.                   ..+++...+|+++|++++.++|++|.+++   ++||+||+|+|
T Consensus       121 ~~~~-~g~Ii~isS~~~~-------------------~~~~~~~~~Y~~sKaal~~l~r~lA~e~~---~~gIrvN~I~P  177 (245)
T d2ag5a1         121 LAQK-SGNIINMSSVASS-------------------VKGVVNRCVYSTTKAAVIGLTKSVAADFI---QQGIRCNCVCP  177 (245)
T ss_dssp             HHHT-CEEEEEECCSBTT-------------------TBCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEE
T ss_pred             ccCC-Cceeeeeechhhc-------------------cCCccchhHHHHHHHHHHHHHHHHHHHhh---hhCcEEEEEee
Confidence            9877 8999999998762                   23567788999999999999999999998   88999999999


Q ss_pred             CcccCCccCcchhH-----HHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC-CCCcccceeecCCCcc
Q 024553          170 GVVKTNIMREVPSF-----LSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  230 (266)
Q Consensus       170 G~v~T~~~~~~~~~-----~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~-~~~~~G~~~~~~~g~~  230 (266)
                      |+|+|++.......     ..........|++|+.+|+|+|+.+.+++.. +...+|..+..++|-.
T Consensus       178 G~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~~v~fL~s~~s~~iTG~~i~VDGG~s  244 (245)
T d2ag5a1         178 GTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVTGNPVIIDGGWS  244 (245)
T ss_dssp             SCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred             ceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCCCcCceEEeCCCcC
Confidence            99999987653221     1122233445788899999999999954432 2356899888888753

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.94  E-value=2.7e-27  Score=200.25  Aligned_cols=181  Identities=14%  Similarity=0.127  Sum_probs=144.9

Q ss_pred             EecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC----CCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcC
Q 024553           17 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA----TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS   92 (266)
Q Consensus        17 ~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~   92 (266)
                      .+|+++.++++++++++.+      .+++||+||||||...    +..+.+.++|+++|++|+.+.+.+++.++|+|++ 
T Consensus        91 ~~d~~~~~~~~~~~~~~~~------~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~~-  163 (329)
T d1uh5a_          91 RYNMLQNYTIEDVANLIHQ------KYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKP-  163 (329)
T ss_dssp             HHHTCCCCSHHHHHHHHHH------HHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-
T ss_pred             hhhhhhHHHHHHHHHHHHH------HhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhccc-
Confidence            3477788999999999999      5689999999999763    4567788999999999999999999999999976 


Q ss_pred             CCCCeEEEEcCCcccccccccCCccccccCcccCCCCCCh-hhcchHhHHHHHHHHHHHHHhhCCCCC-CCeEEEEecCC
Q 024553           93 PVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPC-ARIYEYSKLCLLIFSYELHRNLGLDKS-RHVSVIAADPG  170 (266)
Q Consensus        93 ~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~~~~~~~~~la~~~~~~~~-~~i~v~~v~PG  170 (266)
                        +|+||++||.++.                    ..++. ...|+++|++++.|+++||.+++   + +|||||+|+||
T Consensus       164 --~GsIv~iss~~~~--------------------~~~p~y~~~y~asKaal~~ltr~lA~Ela---~~~gIRVNaI~PG  218 (329)
T d1uh5a_         164 --QSSIISLTYHASQ--------------------KVVPGYGGGMSSAKAALESDTRVLAYHLG---RNYNIRINTISAG  218 (329)
T ss_dssp             --EEEEEEEECGGGT--------------------SCCTTCTTTHHHHHHHHHHHHHHHHHHHH---HHHCCEEEEEEEC
T ss_pred             --ccccccceeehhc--------------------ccccccchhhhhhhccccccchhhHHHHh---cccCcEEEEEecC
Confidence              5799999998863                    34444 45689999999999999999996   4 59999999999


Q ss_pred             cccCCccCcch--------------------------------------------hHHHHHHHHHHHHhhcCCCHHHHHH
Q 024553          171 VVKTNIMREVP--------------------------------------------SFLSLMAFTVLKLLGLLQSPEKGIN  206 (266)
Q Consensus       171 ~v~T~~~~~~~--------------------------------------------~~~~~~~~~~~~~~~~~~~p~~~a~  206 (266)
                      +|+|+..+..+                                            ............|++|+.+|+|+|.
T Consensus       219 ~i~T~a~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pedvA~  298 (329)
T d1uh5a_         219 PLKSRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGS  298 (329)
T ss_dssp             CCCCTTGGGCC------------------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHH
T ss_pred             cccchhhhcccchhhhhhhhhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHHHHHH
Confidence            99995433211                                            1111222333447889999999999


Q ss_pred             HHHHHhcCCC---CcccceeecCCCccc
Q 024553          207 SVLDAALAPP---ETSGVYFFGGKGRTV  231 (266)
Q Consensus       207 ~~~~~~~~~~---~~~G~~~~~~~g~~~  231 (266)
                      .++  ||+++   ..+|+.+.+++|-.+
T Consensus       299 ~v~--fLaSd~s~~iTGq~i~VDGG~~~  324 (329)
T d1uh5a_         299 VAS--FLLSRESRAITGQTIYVDNGLNI  324 (329)
T ss_dssp             HHH--HHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHH--HHhCchhCCccCCeEEECCCccc
Confidence            999  55554   468999998888644

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.92  E-value=3.3e-25  Score=183.56  Aligned_cols=185  Identities=15%  Similarity=0.145  Sum_probs=136.1

Q ss_pred             EEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccc--------------hhhhhhhh
Q 024553           13 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYD--------------QMMSTNYI   76 (266)
Q Consensus        13 ~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~--------------~~~~~n~~   76 (266)
                      +..+.+|+++.++++++++++.+      ++++||+||||||...  +..+.+.++|+              ..|.+|+.
T Consensus        72 ~~~~~~dv~~~~~v~~~~~~~~~------~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~  145 (284)
T d1e7wa_          72 GADGSAPVTLFTRCAELVAACYT------HWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAI  145 (284)
T ss_dssp             ----CCCBCHHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTH
T ss_pred             cccccccCCCHHHHHHHHHHHHH------HhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhhee
Confidence            34456679999999999999999      5689999999999873  44555555555              47899999


Q ss_pred             hHHHHHHhhHHHHhcC-----CCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHH
Q 024553           77 GAFFLTKLLLPLLKNS-----PVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELH  151 (266)
Q Consensus        77 ~~~~l~~~~~~~l~~~-----~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la  151 (266)
                      +++++++.+.+.+...     ...++|++++|...                    ..+.++..+|+++|+++..|++++|
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~s~~~--------------------~~~~~~~~~Y~asKaal~~lt~~lA  205 (284)
T d1e7wa_         146 APYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMT--------------------NQPLLGYTIYTMAKGALEGLTRSAA  205 (284)
T ss_dssp             HHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTT--------------------TSCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             eeeeeeccccchhhhhHHHhcCCCCcccccccccc--------------------cCCccceeeeccccccchhhhHHHH
Confidence            9999999988875422     22678999999876                    3467778899999999999999999


Q ss_pred             HhhCCCCCCCeEEEEecCCcccCCccCcchhHHHHHHHHHHHH-hhcCCCHHHHHHHHHHHhcCCC---CcccceeecCC
Q 024553          152 RNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL-LGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGK  227 (266)
Q Consensus       152 ~~~~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~a~~~~~~~~~~~---~~~G~~~~~~~  227 (266)
                      ++++   +.||+||+|+||++.+.  ...++.. ........+ .+|+.+|+|+|+.+++  |.++   ..+|..+..++
T Consensus       206 ~el~---~~gIrvN~I~PG~t~~~--~~~~~~~-~~~~~~~~pl~~R~~~peeiA~~v~f--L~S~~s~~itG~~i~VDG  277 (284)
T d1e7wa_         206 LELA---PLQIRVNGVGPGLSVLV--DDMPPAV-WEGHRSKVPLYQRDSSAAEVSDVVIF--LCSSKAKYITGTCVKVDG  277 (284)
T ss_dssp             HHHG---GGTEEEEEEEESSBCCG--GGSCHHH-HHHHHTTCTTTTSCBCHHHHHHHHHH--HHSGGGTTCCSCEEEEST
T ss_pred             HHhC---Ccccccccccccccccc--ccCCHHH-HHHHHhcCCCCCCCCCHHHHHHHHHH--HhCchhcCccCCeEEECc
Confidence            9998   89999999999986543  3333222 222222233 4788999999999994  4444   45899888888


Q ss_pred             Cccc
Q 024553          228 GRTV  231 (266)
Q Consensus       228 g~~~  231 (266)
                      |..+
T Consensus       278 G~sl  281 (284)
T d1e7wa_         278 GYSL  281 (284)
T ss_dssp             TGGG
T ss_pred             Chhc
Confidence            8654

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=4.4e-25  Score=179.42  Aligned_cols=183  Identities=17%  Similarity=0.215  Sum_probs=140.5

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--------CCCcCCCcccchhhhhhhhhHHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--------TSSRLTPEGYDQMMSTNYIGAFFL   81 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--------~~~~~~~~~~~~~~~~n~~~~~~l   81 (266)
                      +.....+.+|+.+...++..+.++..      ....+|.+++|+++..        +..+.+.+.|++++++|+.+++++
T Consensus        50 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~  123 (248)
T d2o23a1          50 GNNCVFAPADVTSEKDVQTALALAKG------KFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNV  123 (248)
T ss_dssp             CTTEEEEECCTTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHH
T ss_pred             CCCccccccccccccccccccccccc------ccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHH
Confidence            35688999999999999999999988      4467889988887652        334567789999999999999999


Q ss_pred             HHhhHHHHhcCC-----CCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCC
Q 024553           82 TKLLLPLLKNSP-----VPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGL  156 (266)
Q Consensus        82 ~~~~~~~l~~~~-----~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~  156 (266)
                      ++.++|+|..+.     ..|+||++||..+.                    .+.++..+|+++|+++..|+++|+.+++ 
T Consensus       124 ~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~--------------------~~~~~~~~Y~asKaal~~lt~~la~e~~-  182 (248)
T d2o23a1         124 IRLVAGEMGQNEPDQGGQRGVIINTASVAAF--------------------EGQVGQAAYSASKGGIVGMTLPIARDLA-  182 (248)
T ss_dssp             HHHHHHHHTTSCCCTTSCCEEEEEECCTHHH--------------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG-
T ss_pred             HHHhHHHHHHhhhhccCCceEEEEecchhhc--------------------cCCCCchHHHHHHHHHHHHHHHHHHHhc-
Confidence            999999987541     26899999999974                    3667788999999999999999999998 


Q ss_pred             CCCCCeEEEEecCCcccCCccCcchhHHHHHHHHHHHHh-hcCCCHHHHHHHHHHHhcCCCCccccee
Q 024553          157 DKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL-GLLQSPEKGINSVLDAALAPPETSGVYF  223 (266)
Q Consensus       157 ~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~a~~~~~~~~~~~~~~G~~~  223 (266)
                        +.||+||+|+||+++|++....+...... .....++ +|+.+|+|+|+.+++++ .++..+|+.+
T Consensus       183 --~~gIrvN~I~PG~i~T~~~~~~~~~~~~~-~~~~~pl~~R~g~peevA~~v~fL~-s~~~itGq~I  246 (248)
T d2o23a1         183 --PIGIRVMTIAPGLFGTPLLTSLPEKVCNF-LASQVPFPSRLGDPAEYAHLVQAII-ENPFLNGEVI  246 (248)
T ss_dssp             --GGTEEEEEEEECCBCCC----------CH-HHHTCSSSCSCBCHHHHHHHHHHHH-HCTTCCSCEE
T ss_pred             --ccCcceeeeccCceecchhhcCCHHHHHH-HHhcCCCCCCCcCHHHHHHHHHHHH-hCCCCCceEe
Confidence              88999999999999999987765432221 1222233 78889999999999654 3334455543

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=2.5e-24  Score=175.90  Aligned_cols=188  Identities=15%  Similarity=0.155  Sum_probs=154.8

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCC-------CcCCCcccchhhhhhhhhHHHHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS-------SRLTPEGYDQMMSTNYIGAFFLTK   83 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~   83 (266)
                      ....++.+|+++..++..++.++..      ..+.+|++||||+.....       .....+.|...+.+|+.+.+.+++
T Consensus        55 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (258)
T d1qsga_          55 GSDIVLQCDVAEDASIDTMFAELGK------VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAK  128 (258)
T ss_dssp             TCCCEEECCTTCHHHHHHHHHHHHT------TCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCcceeecccchHHHHHHHHHHhhh------cccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence            3567889999999999999999988      779999999999986321       234556688999999999999999


Q ss_pred             hhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeE
Q 024553           84 LLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVS  163 (266)
Q Consensus        84 ~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~  163 (266)
                      .+.+.+++   ++.|+++||..+                    ..+.+....|+++|+++..|++++|.+++   +++|+
T Consensus       129 ~~~~~~~~---~~~Ii~iss~~~--------------------~~~~~~~~~Y~~sKaal~~ltr~lA~el~---~~gIr  182 (258)
T d1qsga_         129 ACRSMLNP---GSALLTLSYLGA--------------------ERAIPNYNVMGLAKASLEANVRYMANAMG---PEGVR  182 (258)
T ss_dssp             HHGGGEEE---EEEEEEEECGGG--------------------TSBCTTTTHHHHHHHHHHHHHHHHHHHHT---TTTEE
T ss_pred             HHHHhccC---CcEEEEecchhh--------------------ccCCCCcHHHHHHHHHHHHHHHHHHHHhC---ccCce
Confidence            99999876   568999999876                    34667778899999999999999999998   89999


Q ss_pred             EEEecCCcccCCccCcchhHHH-HHHHHHHHHhhcCCCHHHHHHHHHHHhcCCC---CcccceeecCCCcccc
Q 024553          164 VIAADPGVVKTNIMREVPSFLS-LMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTVN  232 (266)
Q Consensus       164 v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~---~~~G~~~~~~~g~~~~  232 (266)
                      ||+|+||+|+|++......... ........|++|+.+|+|+|+.++  ||.++   ..+|..+..++|-.+.
T Consensus       183 VN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeia~~v~--fL~s~~s~~itG~~i~vDGG~~i~  253 (258)
T d1qsga_         183 VNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAA--FLCSDLSAGISGEVVHVDGGFSIA  253 (258)
T ss_dssp             EEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHH--HHTSGGGTTCCSCEEEESTTGGGB
T ss_pred             eecccccccccccccccchhhhHHHHHHhCCCCCCCcCHHHHHHHHH--HHhCchhcCccCceEEECcCHHHh
Confidence            9999999999999876543332 333444567889999999999999  44444   4689988888886553

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.90  E-value=8.5e-25  Score=176.34  Aligned_cols=176  Identities=14%  Similarity=0.021  Sum_probs=138.6

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC---CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      .....+.+|.++.++++.+..++.+.+    ..+++|+||||||...   +..+.+.+.|+++|++|+.+.+++++.++|
T Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  116 (236)
T d1dhra_          41 SASVIVKMTDSFTEQADQVTAEVGKLL----GDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATK  116 (236)
T ss_dssp             SEEEECCCCSCHHHHHHHHHHHHHHHH----TTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccceeecccCcHHHHHHHHHHHHHHh----CCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHH
Confidence            345677889999999999888887755    3468999999999653   334556788999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++   +|+||++||.++.                    .+.+...+|++||+++..|+++|+.+++. .+++|+||+|
T Consensus       117 ~m~~---~G~Iv~isS~~~~--------------------~~~~~~~~Y~asKaal~~lt~~la~El~~-~~~gI~vn~v  172 (236)
T d1dhra_         117 HLKE---GGLLTLAGAKAAL--------------------DGTPGMIGYGMAKGAVHQLCQSLAGKNSG-MPSGAAAIAV  172 (236)
T ss_dssp             HEEE---EEEEEEECCGGGG--------------------SCCTTBHHHHHHHHHHHHHHHHHTSTTSS-CCTTCEEEEE
T ss_pred             hccc---ccceeEEccHHHc--------------------CCccCCcccHHHHHHHHHHHHHHHHHhcc-CCCcEEEEEE
Confidence            9976   5899999999873                    46778889999999999999999999851 1379999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC-CCccccee
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYF  223 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~-~~~~G~~~  223 (266)
                      +||+|+|++.+...+..         ..+++.+|+++|+.+.+++... ...+|.++
T Consensus       173 ~PG~v~T~~~~~~~~~~---------~~~~~~~pe~va~~~~~l~s~~~~~i~G~~i  220 (236)
T d1dhra_         173 LPVTLDTPMNRKSMPEA---------DFSSWTPLEFLVETFHDWITGNKRPNSGSLI  220 (236)
T ss_dssp             EESCEECHHHHHHSTTS---------CGGGSEEHHHHHHHHHHHHTTTTCCCTTCEE
T ss_pred             EeccCcCCcchhhCccc---------hhhcCCCHHHHHHHHHHHhCCCccCCCCCeE
Confidence            99999998854322111         1234568999999999654322 24577654

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.90  E-value=1.5e-24  Score=178.74  Aligned_cols=210  Identities=17%  Similarity=0.154  Sum_probs=149.2

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCC---CcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS---SRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      ....++.+|+++.+++.++++++.+      .++++|++|+|+|.....   .....+.++....++....+........
T Consensus        55 ~~~~~~~~d~~~~~~~~~~~~~~~~------~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (274)
T d2pd4a1          55 NSPYVYELDVSKEEHFKSLYNSVKK------DLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNT  128 (274)
T ss_dssp             TCCCEEECCTTCHHHHHHHHHHHHH------HTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             CceeEeeecccchhhHHHHHHHHHH------HcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccc
Confidence            3467899999999999999999999      678999999999987432   2222333333333333333333333333


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      .++..+..+.|+++++.+.                    .........|+++|+++..++++++.+++   +.||+||+|
T Consensus       129 ~~~~~~~~~~i~~~s~~~~--------------------~~~~~~~~~y~asK~al~~ltr~lA~e~~---~~GIrvN~I  185 (274)
T d2pd4a1         129 LKPLLNNGASVLTLSYLGS--------------------TKYMAHYNVMGLAKAALESAVRYLAVDLG---KHHIRVNAL  185 (274)
T ss_dssp             HGGGEEEEEEEEEEECGGG--------------------TSBCTTCHHHHHHHHHHHHHHHHHHHHHH---TTTCEEEEE
T ss_pred             cccccccCcceeeeccccc--------------------ccccccchhhhHHHHHHHHHHHhhHHHhc---CcCceeccc
Confidence            3333231345666666554                    23556667899999999999999999998   899999999


Q ss_pred             cCCcccCCccCcchhHHHH-HHHHHHHHhhcCCCHHHHHHHHHHHhcCCC---CcccceeecCCCccc-cCCccccCHHH
Q 024553          168 DPGVVKTNIMREVPSFLSL-MAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTV-NSSALSFNSKL  242 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~---~~~G~~~~~~~g~~~-~~~~~~~~~~~  242 (266)
                      +||+++|++.......... .......+++++.+|+|+|+.+++  |.++   ..+|..+..++|-.+ -...+...+..
T Consensus       186 ~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedIA~~v~f--L~S~~s~~itG~~i~vDGG~~~~g~~~~~~~~~~  263 (274)
T d2pd4a1         186 SAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMY--LLSSLSSGVSGEVHFVDAGYHVMGMGAVEEKDNK  263 (274)
T ss_dssp             EECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHH--HHSGGGTTCCSCEEEESTTGGGBSSCCCTTCTTT
T ss_pred             ccCcccCccccccCchHHHHHHHhhhhhccCCcCHHHHHHHHHH--HhChhhCCCcCceEEECCChhhccCCcccccccc
Confidence            9999999998776543332 233445678899999999999994  4444   458998888888744 33344567888


Q ss_pred             HHHHHHHHH
Q 024553          243 AGELWTTSC  251 (266)
Q Consensus       243 ~~~~~~~~~  251 (266)
                      ++.+|+..+
T Consensus       264 ~~~~~~~~~  272 (274)
T d2pd4a1         264 ATLLWDLHK  272 (274)
T ss_dssp             TCCHHHHSS
T ss_pred             hhhhhhhhc
Confidence            899998764

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.90  E-value=6.6e-24  Score=171.48  Aligned_cols=192  Identities=17%  Similarity=0.194  Sum_probs=150.0

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC------CCCcCCCcccchhhhhhhhhHHHHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTK   83 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~------~~~~~~~~~~~~~~~~n~~~~~~l~~   83 (266)
                      +.+...+.+|+++......+......      . ...+.++.+++...      .....+.+.|++++++|+.+.+.+++
T Consensus        37 ~~~~~~~~~d~~~~~~~~~~~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  109 (241)
T d1uaya_          37 GEDLIYVEGDVTREEDVRRAVARAQE------E-APLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLR  109 (241)
T ss_dssp             SSSSEEEECCTTCHHHHHHHHHHHHH------H-SCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             cccceEeeccccchhhhHHHHHhhhc------c-ccccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHH
Confidence            34678899999999999999888876      2 34566677776542      23445667899999999999999999


Q ss_pred             hhHHHHhcCC-----CCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCC
Q 024553           84 LLLPLLKNSP-----VPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDK  158 (266)
Q Consensus        84 ~~~~~l~~~~-----~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~  158 (266)
                      .+.+.+.+..     ..|+||++||..+.                    .+.++..+|+++|+++..|++++|.+++   
T Consensus       110 ~~~~~~~~~~~~~~~~~G~Ii~isS~~~~--------------------~~~~~~~~Y~asKaal~~lt~~lA~ela---  166 (241)
T d1uaya_         110 LAAWAMRENPPDAEGQRGVIVNTASVAAF--------------------EGQIGQAAYAASKGGVVALTLPAARELA---  166 (241)
T ss_dssp             HHHHHHTTCCCCTTSCSEEEEEECCTHHH--------------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---
T ss_pred             HHHHHhhhhhhhcccCceeeeeecchhhc--------------------cCCCCchhhHHHHHHHHHHHHHHHHHHh---
Confidence            9999864321     27899999999874                    3677788999999999999999999998   


Q ss_pred             CCCeEEEEecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          159 SRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       159 ~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      ++||+||+|+||+|+|++................++.+|+.+|+|+|+.+++++. +...+|..+..++|-.+.
T Consensus       167 ~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~R~g~pedvA~~v~fL~s-~~~iTG~~i~VDGG~~m~  239 (241)
T d1uaya_         167 GWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHILE-NPMLNGEVVRLDGALRMA  239 (241)
T ss_dssp             GGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHH-CTTCCSCEEEESTTCCCC
T ss_pred             hcCCceeeecCCcccccccchhhhhHHHHHHhcCCCCCCCcCHHHHHHHHHHHHh-CCCCCCCEEEECCcccCC
Confidence            8899999999999999988775543322222222234788899999999997654 456789999888886543

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=5e-24  Score=175.07  Aligned_cols=167  Identities=19%  Similarity=0.188  Sum_probs=138.6

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC--CCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +..+.++.+|+++.+.+..+.+++..      ..+.+|++++|||...  +..+.+.++|++++++|+.|++.+++.++|
T Consensus        63 ~~~~~~~~~d~~~~~~~~~~~~~~~~------~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp  136 (269)
T d1xu9a_          63 AASAHYIAGTMEDMTFAEQFVAQAGK------LMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALP  136 (269)
T ss_dssp             CSEEEEEECCTTCHHHHHHHHHHHHH------HHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cccchhhhhhhhhHHHHHHHHHHHHH------HhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHH
Confidence            56789999999999999999999988      5689999999999873  456778899999999999999999999999


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                      +|++.  +|+||+++|.++                    ..+++...+|++||+++..|+++|+.+++. ...+|+|++|
T Consensus       137 ~m~~~--~G~ii~isS~~~--------------------~~~~p~~~~Y~asKaal~~~~~~La~El~~-~~~~I~V~~v  193 (269)
T d1xu9a_         137 MLKQS--NGSIVVVSSLAG--------------------KVAYPMVAAYSASKFALDGFFSSIRKEYSV-SRVNVSITLC  193 (269)
T ss_dssp             HHHHH--TCEEEEEEEGGG--------------------TSCCTTCHHHHHHHHHHHHHHHHHHHHHHH-HTCCCEEEEE
T ss_pred             HHHhc--CCcceEeccchh--------------------cCCCCCchHHHHHHHHHHHHHHHHHHHhhh-cCCCEEEEEE
Confidence            99864  589999999987                    457888899999999999999999999841 0357999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA  214 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~  214 (266)
                      +||+|+|++.........         .....+|+++|+.++.....
T Consensus       194 ~PG~v~T~~~~~~~~~~~---------~~~~~~~e~~a~~i~~~~~~  231 (269)
T d1xu9a_         194 VLGLIDTETAMKAVSGIV---------HMQAAPKEECALEIIKGGAL  231 (269)
T ss_dssp             EECCBCCHHHHHHSCGGG---------GGGCBCHHHHHHHHHHHHHT
T ss_pred             ecCcCCCcHHHHhccCCc---------cccCCCHHHHHHHHHHHhhc
Confidence            999999998654221110         01234899999999866544

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.89  E-value=4e-24  Score=178.13  Aligned_cols=179  Identities=14%  Similarity=0.100  Sum_probs=142.4

Q ss_pred             CCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC----CCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCCCC
Q 024553           21 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL----ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPS   96 (266)
Q Consensus        21 s~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~   96 (266)
                      ++..+++++++++.+      ++++||+||||||..    .++.+.+.++|++++++|+.+++.+++.+++++.+   .+
T Consensus       101 ~~~~~~~~~~~~~~~------~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~---~g  171 (297)
T d1d7oa_         101 SSNWTVQEAAECVRQ------DFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNP---GG  171 (297)
T ss_dssp             CCCCSHHHHHHHHHH------HHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EE
T ss_pred             ccHHHHHHHHHHHHH------HhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHHHhhc---CC
Confidence            556677899999998      568999999999975    35667889999999999999999999999999887   45


Q ss_pred             eEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcccCCc
Q 024553           97 RIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI  176 (266)
Q Consensus        97 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~T~~  176 (266)
                      +++.+++....                   ....+....|..+|+++..+++.++.++..  ++|||||+|+||++.|++
T Consensus       172 ~~~~~~~~~~~-------------------~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~--~~gIrvN~I~PG~i~T~~  230 (297)
T d1d7oa_         172 ASISLTYIASE-------------------RIIPGYGGGMSSAKAALESDTRVLAFEAGR--KQNIRVNTISAGPLGSRA  230 (297)
T ss_dssp             EEEEEECGGGT-------------------SCCTTCTTTHHHHHHHHHHHHHHHHHHHHH--HHCCEEEEEEECCCBCCC
T ss_pred             cceeeeehhhc-------------------ccccccccceecccccccccccccchhccc--cceEEecccccccccchh
Confidence            66777765542                   123455678999999999999999999851  469999999999999999


Q ss_pred             cCcchhHHHH-HHHHHHHHhhcCCCHHHHHHHHHHHhcCCC---CcccceeecCCCccc
Q 024553          177 MREVPSFLSL-MAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTV  231 (266)
Q Consensus       177 ~~~~~~~~~~-~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~---~~~G~~~~~~~g~~~  231 (266)
                      .......... .......|++|+.+|+|+|+.++  +|+++   ..+|+.+..++|-.+
T Consensus       231 ~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~--fL~S~~a~~itGq~i~vDGG~s~  287 (297)
T d1d7oa_         231 AKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAA--FLVSPLASAITGATIYVDNGLNS  287 (297)
T ss_dssp             SSCCSHHHHHHHHHHHHSSSCCCBCHHHHHHHHH--HHTSGGGTTCCSCEEEESTTGGG
T ss_pred             hhhccCCHHHHHHHHhCCCCCCCCCHHHHHHHHH--HHhCchhcCCcCceEEECcCHhh
Confidence            8875433322 22344457889999999999999  55554   458998888888654

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.89  E-value=4.8e-24  Score=171.84  Aligned_cols=177  Identities=14%  Similarity=-0.015  Sum_probs=138.5

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC---CCCcCCCcccchhhhhhhhhHHHHHHhhHHH
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL   88 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   88 (266)
                      ....+.+|+.+.+......+.+...+    .+++||+||||||...   +..+.+.+.|+.++++|+.+++++++.++|+
T Consensus        42 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  117 (235)
T d1ooea_          42 SNILVDGNKNWTEQEQSILEQTASSL----QGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTH  117 (235)
T ss_dssp             EEEECCTTSCHHHHHHHHHHHHHHHH----TTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccceeccccCchhHHHHHHHHHHHHh----cCCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccc
Confidence            45667788888888888888877755    4689999999999752   3344456789999999999999999999999


Q ss_pred             HhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           89 LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        89 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      |++   +|+||++||..+                    ..+.++..+|+++|+++..|+++|+.++.. .+.+|+||.|+
T Consensus       118 m~~---~g~Iv~isS~~~--------------------~~~~~~~~~Y~asKaal~~l~~~la~e~~~-~~~~i~v~~i~  173 (235)
T d1ooea_         118 LKP---GGLLQLTGAAAA--------------------MGPTPSMIGYGMAKAAVHHLTSSLAAKDSG-LPDNSAVLTIM  173 (235)
T ss_dssp             EEE---EEEEEEECCGGG--------------------GSCCTTBHHHHHHHHHHHHHHHHHHSTTSS-CCTTCEEEEEE
T ss_pred             ccc---ceEEEEeccHHh--------------------cCCcccccchHHHHHHHHHHHHHHHHHhcc-CCCceEEEEEe
Confidence            976   589999999887                    347788899999999999999999999851 14799999999


Q ss_pred             CCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC--CCcccceeec
Q 024553          169 PGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP--PETSGVYFFG  225 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~--~~~~G~~~~~  225 (266)
                      ||+++|++.+...+..         ...++.+|+++++.++.++..+  ...+|.++..
T Consensus       174 Pg~~~T~~~~~~~~~~---------~~~~~~~~~~va~~~~~~l~~~~~~~~tG~~i~v  223 (235)
T d1ooea_         174 PVTLDTPMNRKWMPNA---------DHSSWTPLSFISEHLLKWTTETSSRPSSGALLKI  223 (235)
T ss_dssp             ESCBCCHHHHHHSTTC---------CGGGCBCHHHHHHHHHHHHHCGGGCCCTTCEEEE
T ss_pred             cCcCcCcchhhhCcCC---------ccccCCCHHHHHHHHHHHhcCccccCCCceEEEE
Confidence            9999998865432211         1224568999999987544333  2457877643

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.88  E-value=1.3e-22  Score=166.33  Aligned_cols=194  Identities=15%  Similarity=0.190  Sum_probs=143.7

Q ss_pred             hcccCCCccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCC-------CCCcCCCcccchhhhhhhh
Q 024553            4 ITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA-------TSSRLTPEGYDQMMSTNYI   76 (266)
Q Consensus         4 i~~~~~~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~-------~~~~~~~~~~~~~~~~n~~   76 (266)
                      +.+.. +.+...++||+++++++..+++.+.+.+.   ..+.+|++|||||+..       +..+.+.+.|...+.+|..
T Consensus        49 ~~~~~-~~~~~~~~~dv~~~~~~~~~~~~v~~~~~---~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (268)
T d2h7ma1          49 ITDRL-PAKAPLLELDVQNEEHLASLAGRVTEAIG---AGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAY  124 (268)
T ss_dssp             HHTTS-SSCCCEEECCTTCHHHHHHHHHHHHHHHC---TTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTH
T ss_pred             HHHHc-CCceeeEeeecccccccccccchhhhccc---cCCCcceeeecccccCccccccccccccchhhhhhhhhhhhh
Confidence            33443 45678999999999999999999988664   4578999999999763       2345566788899999999


Q ss_pred             hHHHHHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCC
Q 024553           77 GAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGL  156 (266)
Q Consensus        77 ~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~  156 (266)
                      +.+...+...+.+..   .+.++. +|...                    ....+....|+++|+++..++++++.++. 
T Consensus       125 ~~~~~~~~~~~~~~~---~~~i~~-~s~~~--------------------~~~~p~~~~y~~sK~a~~~ltr~lA~e~~-  179 (268)
T d2h7ma1         125 SYASMAKALLPIMNP---GGSIVG-MDFDP--------------------SRAMPAYNWMTVAKSALESVNRFVAREAG-  179 (268)
T ss_dssp             HHHHHHHHHGGGEEE---EEEEEE-EECCC--------------------SSCCTTTHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHhhhccc---cccccc-ccccc--------------------cccCcccchhhccccchhhccccchhhhh-
Confidence            999999888776644   334444 44333                    34567788999999999999999999998 


Q ss_pred             CCCCCeEEEEecCCcccCCccCcchh-----H-HH---H--HHHHHHHHhhc-CCCHHHHHHHHHHHhcCCC---Ccccc
Q 024553          157 DKSRHVSVIAADPGVVKTNIMREVPS-----F-LS---L--MAFTVLKLLGL-LQSPEKGINSVLDAALAPP---ETSGV  221 (266)
Q Consensus       157 ~~~~~i~v~~v~PG~v~T~~~~~~~~-----~-~~---~--~~~~~~~~~~~-~~~p~~~a~~~~~~~~~~~---~~~G~  221 (266)
                        +.+||||+|+||+|+|++......     . ..   .  .......|+++ +.+|+|+|+.+++  +.++   ..+|.
T Consensus       180 --~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~~p~dva~~v~f--L~Sd~a~~iTG~  255 (268)
T d2h7ma1         180 --KYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCA--LLSDWLPATTGD  255 (268)
T ss_dssp             --TTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHHHHHHH--HHSSSCTTCCSE
T ss_pred             --ccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHH--HhCchhcCccCC
Confidence              889999999999999997653221     1 10   0  11112224444 8899999999994  4454   45899


Q ss_pred             eeecCCCcc
Q 024553          222 YFFGGKGRT  230 (266)
Q Consensus       222 ~~~~~~g~~  230 (266)
                      .+..++|--
T Consensus       256 ~i~vDGG~~  264 (268)
T d2h7ma1         256 IIYADGGAH  264 (268)
T ss_dssp             EEEESTTGG
T ss_pred             EEEECcCcc
Confidence            887777753

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.86  E-value=3.2e-21  Score=157.76  Aligned_cols=196  Identities=15%  Similarity=0.125  Sum_probs=138.0

Q ss_pred             hhcccCCCccEEEEEecCCC----HHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCC--c-----------CCCc
Q 024553            3 DITSRNKDARLEAFQVDLSS----FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--R-----------LTPE   65 (266)
Q Consensus         3 ~i~~~~~~~~~~~i~~Dls~----~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~--~-----------~~~~   65 (266)
                      ++.+.+ +.+..++.+|+.+    .+.++++++++.+      ++++||++|||||+..+..  .           ...+
T Consensus        45 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~  117 (266)
T d1mxha_          45 ELNAAR-AGSAVLCKGDLSLSSSLLDCCEDIIDCSFR------AFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDA  117 (266)
T ss_dssp             HHHHHS-TTCEEEEECCCSSSTTHHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCSCC-----------CHHH
T ss_pred             HHHhhc-CCceEEEecccccchhHHHHHHHHHHHHHH------HhCCCCEEEECCccCCCCcccccccccchhccccccc
Confidence            344444 3466777766654    5667777787877      5689999999999874321  1           1123


Q ss_pred             ccchhhhhhhhhHHHHHHhhHHHHhcCC----CCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHH
Q 024553           66 GYDQMMSTNYIGAFFLTKLLLPLLKNSP----VPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKL  141 (266)
Q Consensus        66 ~~~~~~~~n~~~~~~l~~~~~~~l~~~~----~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~  141 (266)
                      .+...+..|+.+.+...+...+.+....    ..+.+++++|..+                    ....++...|++||+
T Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~Y~asKa  177 (266)
T d1mxha_         118 QVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMT--------------------DLPLPGFCVYTMAKH  177 (266)
T ss_dssp             HHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGG--------------------GSCCTTCHHHHHHHH
T ss_pred             ccccccccccccccchhhhhccccccccccccccccchhhhhccc--------------------cccCcchhhhhhhHH
Confidence            3557788899999888888877775432    2567888888776                    347778899999999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCeEEEEecCCcccCCccCcchhHHHHHHHHHHHHhhc-CCCHHHHHHHHHHHhcC-CCCcc
Q 024553          142 CLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGL-LQSPEKGINSVLDAALA-PPETS  219 (266)
Q Consensus       142 ~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~a~~~~~~~~~-~~~~~  219 (266)
                      +++.+++++|.++.   ++||+||+|+||+++|+.......   ........++++ +.+|+|+|+.+++++.. +...+
T Consensus       178 al~~lt~~lA~e~~---~~gIrVN~I~PG~i~t~~~~~~~~---~~~~~~~~pl~r~~~~peeva~~v~fL~s~~s~~it  251 (266)
T d1mxha_         178 ALGGLTRAAALELA---PRHIRVNAVAPGLSLLPPAMPQET---QEEYRRKVPLGQSEASAAQIADAIAFLVSKDAGYIT  251 (266)
T ss_dssp             HHHHHHHHHHHHHG---GGTEEEEEEEESSBSCCSSSCHHH---HHHHHTTCTTTSCCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHhhhHHHHHHHhC---ccCcEEEEeccCcEeccccCCHHH---HHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhCCcc
Confidence            99999999999998   889999999999999987544211   112222335544 47999999999944321 12458


Q ss_pred             cceeecCCCccc
Q 024553          220 GVYFFGGKGRTV  231 (266)
Q Consensus       220 G~~~~~~~g~~~  231 (266)
                      |..+..++|-.+
T Consensus       252 G~~i~vDGG~~l  263 (266)
T d1mxha_         252 GTTLKVDGGLIL  263 (266)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CCeEEECccHhh
Confidence            998887887543

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.78  E-value=8.6e-19  Score=142.40  Aligned_cols=197  Identities=17%  Similarity=0.128  Sum_probs=126.1

Q ss_pred             EecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCCCC
Q 024553           17 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPS   96 (266)
Q Consensus        17 ~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~   96 (266)
                      .+|+++.+..+....++...     ..+.+|++|+|||+..     ..+.++....+|+.+...+.+...+.+.... ..
T Consensus        39 ~~d~~~~~~~~~~~~~~~~~-----~~~~id~lv~~Ag~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  107 (257)
T d1fjha_          39 IADLSTAEGRKQAIADVLAK-----CSKGMDGLVLCAGLGP-----QTKVLGNVVSVNYFGATELMDAFLPALKKGH-QP  107 (257)
T ss_dssp             ECCTTSHHHHHHHHHHHHTT-----CTTCCSEEEECCCCCT-----TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSS-SC
T ss_pred             HHHhcCHHHHHHHHHHHHHH-----hCCCCcEEEEcCCCCC-----cHHHHHHHHHHHHHHHHHHHHHhhhhhhhhc-cC
Confidence            46888888888776666541     3467999999999853     2355788999999999999999999988766 56


Q ss_pred             eEEEEcCCcccccccccC-Cccccc-------cCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEec
Q 024553           97 RIVNVTSFTHRNVFNAQV-NNETIT-------GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  168 (266)
Q Consensus        97 ~iv~vsS~~~~~~~~~~~-~~~~~~-------~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~  168 (266)
                      .+.++.+........... ......       ..........++..+|+++|+++..|+|++|.+++   ++|||||+|+
T Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~---~~gIrVN~I~  184 (257)
T d1fjha_         108 AAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWG---EAGVRLNTIA  184 (257)
T ss_dssp             EEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHH---HTTCEEEEEE
T ss_pred             cceeeeeccccchhhhhhhhhhhccCCcEEEEeeehhccCCCcchHHHHHHhhhhhccccccccccc---cccccccccc
Confidence            666666644321100000 000000       00000011233456799999999999999999998   8999999999


Q ss_pred             CCcccCCccCcchhHHHHHHH--HHHHHhhcCCCHHHHHHHHHHHhcCCC---CcccceeecCCCc
Q 024553          169 PGVVKTNIMREVPSFLSLMAF--TVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGR  229 (266)
Q Consensus       169 PG~v~T~~~~~~~~~~~~~~~--~~~~~~~~~~~p~~~a~~~~~~~~~~~---~~~G~~~~~~~g~  229 (266)
                      ||+|+|++.............  ....|++|+.+|+|+|+.++  ||.++   ..+|..+..++|-
T Consensus       185 PG~i~T~~~~~~~~~~~~~~~~~~~~~PlgR~g~p~eva~~v~--fL~S~~s~~itG~~i~vDGG~  248 (257)
T d1fjha_         185 PGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSEMASVIA--FLMSPAASYVHGAQIVIDGGI  248 (257)
T ss_dssp             ECC---------------------CCCSTTSCCCTHHHHHHHH--HHTSGGGTTCCSCEEEESTTH
T ss_pred             cCCcCChhHHhhcCCHHHHHHHHhcCCCCCCCcCHHHHHHHHH--HHhCchhCCccCceEEeCCCc
Confidence            999999998754332221111  11247889999999999999  55554   4579988888874

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.74  E-value=1.3e-18  Score=141.65  Aligned_cols=162  Identities=19%  Similarity=0.141  Sum_probs=119.2

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCC--CCCCcCCCcccchhhhhhhhhHHHHHHhhHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLP   87 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   87 (266)
                      +.++.++.||+++.++++++++++.+       .+++|.+|||+|..  .+..+.+.+.|+.++++|+.+.+++.+.+  
T Consensus        61 g~~v~~~~~Dv~d~~~~~~~~~~i~~-------~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~--  131 (259)
T d2fr1a1          61 GARTTVAACDVTDRESVRELLGGIGD-------DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELT--  131 (259)
T ss_dssp             TCEEEEEECCTTCHHHHHHHHHTSCT-------TSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHH--
T ss_pred             cccccccccccchHHHHHHhhccccc-------cccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHh--
Confidence            56899999999999999999998865       36899999999987  35667888999999999999999887754  


Q ss_pred             HHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEe
Q 024553           88 LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA  167 (266)
Q Consensus        88 ~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v  167 (266)
                        ...+ .++||++||+.+.                    .+.++...|+++|++++.|++.++       ..|+++++|
T Consensus       132 --~~~~-~~~iv~~SS~a~~--------------------~g~~~~~~YaAaka~l~~la~~~~-------~~Gi~v~~I  181 (259)
T d2fr1a1         132 --RELD-LTAFVLFSSFASA--------------------FGAPGLGGYAPGNAYLDGLAQQRR-------SDGLPATAV  181 (259)
T ss_dssp             --TTSC-CSEEEEEEEHHHH--------------------TCCTTCTTTHHHHHHHHHHHHHHH-------HTTCCCEEE
T ss_pred             --hccC-CceEeeecchhhc--------------------cCCcccHHHHHHHHhHHHHHHHHH-------hCCCCEEEC
Confidence              3334 6899999999874                    366778889999999988876553       358999999


Q ss_pred             cCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCC
Q 024553          168 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP  215 (266)
Q Consensus       168 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~  215 (266)
                      +||.+.+..+..........    ...+ ...+|+++++.+..++...
T Consensus       182 ~pg~~~~~g~~~~~~~~~~~----~~G~-~~~~~~~~~~~l~~~l~~~  224 (259)
T d2fr1a1         182 AWGTWAGSGMAEGPVADRFR----RHGV-IEMPPETACRALQNALDRA  224 (259)
T ss_dssp             EECCBC------------CT----TTTE-ECBCHHHHHHHHHHHHHTT
T ss_pred             CCCcccCCccccchHHHHHH----hcCC-CCCCHHHHHHHHHHHHhCC
Confidence            99988655332211111000    0001 2358999999988766543

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.24  E-value=4.4e-10  Score=94.51  Aligned_cols=190  Identities=8%  Similarity=-0.020  Sum_probs=124.3

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      ..++.++.+|+++.+++.++++.+           .+|+++|+|+....  ..+.++.+..+++|+.|+..+++++...-
T Consensus        54 ~~~~~~~~~Dl~d~~~~~~~~~~~-----------~~d~v~h~aa~~~~--~~~~~~~~~~~~~Nv~gt~nllea~~~~~  120 (357)
T d1db3a_          54 NPKFHLHYGDLSDTSNLTRILREV-----------QPDEVYNLGAMSHV--AVSFESPEYTADVDAMGTLRLLEAIRFLG  120 (357)
T ss_dssp             -CCEEECCCCSSCHHHHHHHHHHH-----------CCSEEEECCCCCTT--TTTTSCHHHHHHHHTHHHHHHHHHHHHTT
T ss_pred             CCCeEEEEeecCCHHHHHHHHhcc-----------CCCEEEEeeccccc--chhhhCHHHHHHHHHHHHHHHHHHHHHhC
Confidence            347899999999999999888654           58999999998642  22346677899999999999999885542


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      .+.  ..++|++||...+.....         ....|..+..+...|+.+|.+.+.+++.+++.+      ++.+..+.|
T Consensus       121 ~~~--~~r~i~~SS~~vYG~~~~---------~~~~E~~~~~P~~~Y~~sK~~~E~~~~~~~~~~------~l~~~ilR~  183 (357)
T d1db3a_         121 LEK--KTRFYQASTSELYGLVQE---------IPQKETTPFYPRSPYAVAKLYAYWITVNYRESY------GMYACNGIL  183 (357)
T ss_dssp             CTT--TCEEEEEEEGGGGTTCCS---------SSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCCEEEEEE
T ss_pred             CCC--CcEEEEEEchhhhCCCCC---------CCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHh------CCCEEEEEe
Confidence            221  458999999776532111         111222334445789999999999999988875      567788889


Q ss_pred             CcccCCccCcchhHHHHHHHHHHHH--------------hhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          170 GVVKTNIMREVPSFLSLMAFTVLKL--------------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       170 G~v~T~~~~~~~~~~~~~~~~~~~~--------------~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      +.+.+|...................              .+.+...+|++++++.++  .....+.| ..+.|+...
T Consensus       184 ~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~--~~~~~~~y-ni~sg~~~s  257 (357)
T d1db3a_         184 FNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMML--QQEQPEDF-VIATGVQYS  257 (357)
T ss_dssp             CCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTT--SSSSCCCE-EECCCCCEE
T ss_pred             ccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHHHH--hCCCCCeE-EECCCCcee
Confidence            8888875433221111111111100              012457999999998433  22333444 445666654

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.11  E-value=1.2e-09  Score=91.95  Aligned_cols=202  Identities=11%  Similarity=0.045  Sum_probs=128.8

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      ..++.++.+|+++...+.++++..           .+|+|||+|+....  ..+.++...++++|+.|+..+++.+....
T Consensus        49 ~~~~~~~~~Dl~d~~~l~~~~~~~-----------~~d~VihlAa~~~~--~~~~~~p~~~~~~N~~gt~nl~~~~~~~~  115 (361)
T d1kewa_          49 SNRYNFEHADICDSAEITRIFEQY-----------QPDAVMHLAAESHV--DRSITGPAAFIETNIVGTYALLEVARKYW  115 (361)
T ss_dssp             CTTEEEEECCTTCHHHHHHHHHHH-----------CCSEEEECCSCCCH--HHHHHCTHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             cCCcEEEEccCCCHHHHHHHHHhC-----------CCCEEEECccccch--hhHHhCHHHHHHHHHHHHHHHHHHHHHhh
Confidence            347899999999999998887543           58999999997532  22334557899999999999999998765


Q ss_pred             hcCC----CCCeEEEEcCCcccccccccC-CccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEE
Q 024553           90 KNSP----VPSRIVNVTSFTHRNVFNAQV-NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSV  164 (266)
Q Consensus        90 ~~~~----~~~~iv~vsS~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v  164 (266)
                      ....    ...++|++||.+.+....... ..+........+.....+...|+.+|.+.+.+++.++..+      ++.+
T Consensus       116 ~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~------~i~~  189 (361)
T d1kewa_         116 SALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY------GLPT  189 (361)
T ss_dssp             HTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCCE
T ss_pred             hhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh------CCCE
Confidence            4321    135899999988765432111 1111111111122334445679999999999999988775      6788


Q ss_pred             EEecCCcccCCccCcchhHHHHHHHHH-HHHh---h------cCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          165 IAADPGVVKTNIMREVPSFLSLMAFTV-LKLL---G------LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       165 ~~v~PG~v~T~~~~~~~~~~~~~~~~~-~~~~---~------~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      ..+.|+.|..|....-.-...+..... ..++   +      .+...+|+|++++.++... .. |..|+.+.|+...
T Consensus       190 ~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~a~ai~~~~~~~-~~-~~~~Ni~s~~~~s  265 (361)
T d1kewa_         190 IVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEG-KA-GETYNIGGHNEKK  265 (361)
T ss_dssp             EEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC-CT-TCEEEECCCCEEE
T ss_pred             EEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHHHHHHHHHHHHhcC-CC-CCeEEECCCCCcc
Confidence            888999888775432110001111011 0111   1      2458999999998655443 33 4455556666554

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=98.85  E-value=2.3e-08  Score=82.39  Aligned_cols=186  Identities=13%  Similarity=0.053  Sum_probs=122.8

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      ..++.++.+|+++........             ..+|.++|.|+....  .......++.+++|+.++..+++.+..  
T Consensus        54 ~~~~~~~~~d~~~~~~~~~~~-------------~~~d~vi~~a~~~~~--~~~~~~~~~~~~~N~~gt~~ll~~~~~--  116 (322)
T d1r6da_          54 DPRLRFVHGDIRDAGLLAREL-------------RGVDAIVHFAAESHV--DRSIAGASVFTETNVQGTQTLLQCAVD--  116 (322)
T ss_dssp             CTTEEEEECCTTCHHHHHHHT-------------TTCCEEEECCSCCCH--HHHHHCCHHHHHHHTHHHHHHHHHHHH--
T ss_pred             CCCeEEEEeccccchhhhccc-------------cccceEEeecccccc--cccccchHHHhhhhHHHHHHHHHHHHH--
Confidence            457899999999998765432             467999999988532  223455678899999999999998853  


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                        .+ ..++|++||...+......         ...+..+..+...|+.+|.+.+.+++.+++++      ++.+..+.|
T Consensus       117 --~~-~~~~I~~Ss~~~yg~~~~~---------~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~------~~~~~~lR~  178 (322)
T d1r6da_         117 --AG-VGRVVHVSTNQVYGSIDSG---------SWTESSPLEPNSPYAASKAGSDLVARAYHRTY------GLDVRITRC  178 (322)
T ss_dssp             --TT-CCEEEEEEEGGGGCCCSSS---------CBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCCEEEEEE
T ss_pred             --cC-CceEEEeecceeecCCCCC---------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh------CCCEEEEEe
Confidence              23 4689999998876532211         11223344455679999999999999998874      678899999


Q ss_pred             CcccCCccCcchhHHHHHHHHHH-HHh---------hcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          170 GVVKTNIMREVPSFLSLMAFTVL-KLL---------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       170 G~v~T~~~~~~~~~~~~~~~~~~-~~~---------~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      +.|..+..........+...... .++         +.+...+|+|++++.++..+  ..|..|+.+.|+..+
T Consensus       179 ~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~--~~~~~~ni~~~~~~s  249 (322)
T d1r6da_         179 CNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGG--RAGEIYHIGGGLELT  249 (322)
T ss_dssp             CEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC--CTTCEEEECCCCEEE
T ss_pred             eeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhCC--CCCCeeEEeecccch
Confidence            99987653321111111111000 011         12458999999999665443  245556656676665

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.84  E-value=3.1e-08  Score=83.89  Aligned_cols=145  Identities=13%  Similarity=0.079  Sum_probs=96.9

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCC-CcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS-SRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      .++.++.+|++|.+.++++++..           .+|+|+|.|+..... ...+.+.....+.+|+.|+..+++.+...-
T Consensus        67 ~~i~~~~~Dl~d~~~l~~~~~~~-----------~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~  135 (393)
T d1i24a_          67 KSIELYVGDICDFEFLAESFKSF-----------EPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG  135 (393)
T ss_dssp             CCCEEEESCTTSHHHHHHHHHHH-----------CCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCcEEEEccCCCHHHHHHHHHhh-----------cchheeccccccccccccccccccccccccccccccHHHHHHHHhc
Confidence            46899999999999999888654           589999999986422 223344456789999999999998875432


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCcc--cc--ccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEE
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNE--TI--TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVI  165 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~  165 (266)
                      .    ..++++.||...+..........  ..  .+....+..+..+...|+.+|.+.+.++..++++.      ++.+.
T Consensus       136 ~----~~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~------~l~~~  205 (393)
T d1i24a_         136 E----ECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW------GIRAT  205 (393)
T ss_dssp             T----TCEEEEECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH------CCEEE
T ss_pred             c----ccceeeccccccccccccccccccccccccccccccccccccccHHHHHhhhhccccccccccc------ceeee
Confidence            1    34677777766543322211111  00  00001111233345679999999999999887775      67888


Q ss_pred             EecCCcccCCc
Q 024553          166 AADPGVVKTNI  176 (266)
Q Consensus       166 ~v~PG~v~T~~  176 (266)
                      .+.|+.+..+.
T Consensus       206 ~lR~~~v~G~~  216 (393)
T d1i24a_         206 DLNQGVVYGVK  216 (393)
T ss_dssp             EEEECEEECSC
T ss_pred             ecccccccCCC
Confidence            88888886654

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.79  E-value=3.3e-07  Score=75.00  Aligned_cols=188  Identities=9%  Similarity=-0.065  Sum_probs=117.4

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      ..++.++.+|+++.+.+.+++...           ..++++|+|+....  ....+...+.+.+|+.|+..++..+...-
T Consensus        48 ~~~~~~~~~Dl~d~~~~~~~~~~~-----------~~~~~~~~a~~~~~--~~~~~~~~~~~~~n~~g~~~~l~~~~~~~  114 (321)
T d1rpna_          48 EGDIQYEDGDMADACSVQRAVIKA-----------QPQEVYNLAAQSFV--GASWNQPVTTGVVDGLGVTHLLEAIRQFS  114 (321)
T ss_dssp             GGGEEEEECCTTCHHHHHHHHHHH-----------CCSEEEECCSCCCH--HHHTTSHHHHHHHHTHHHHHHHHHHHHHC
T ss_pred             cCCcEEEEccccChHHhhhhhccc-----------cccccccccccccc--cccccchHHHHhhhhhchHHHHHHHHHhC
Confidence            357899999999999988877654           45677887776432  22334567899999999999988774432


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                      .    ..++++.||...+......         ...|..+..+...|+.+|.+.+.+++.++...      ++.+..+.|
T Consensus       115 ~----~~~~i~~Ss~~~~~~~~~~---------~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~------~~~~~~lr~  175 (321)
T d1rpna_         115 P----ETRFYQASTSEMFGLIQAE---------RQDENTPFYPRSPYGVAKLYGHWITVNYRESF------GLHASSGIL  175 (321)
T ss_dssp             T----TSEEEEEEEGGGGCSCSSS---------SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCCEEEEEE
T ss_pred             C----CcccccccchhhcCcccCC---------CCCCCCCccccChhHHHHHHHHHHHHHHHhhc------CCcEEEEEE
Confidence            1    3467777775543221111         11223344556789999999999999988775      466777778


Q ss_pred             CcccCCccCcchhHHHHHHHHHHHH--------h------hcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          170 GVVKTNIMREVPSFLSLMAFTVLKL--------L------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       170 G~v~T~~~~~~~~~~~~~~~~~~~~--------~------~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      +.+..|...................        .      +.+...+|+|++++.++..+  ..|.|.. ..++...
T Consensus       176 ~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~--~~~~~ni-~~~~~~s  249 (321)
T d1rpna_         176 FNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQD--KADDYVV-ATGVTTT  249 (321)
T ss_dssp             CCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSS--SCCCEEE-CCSCEEE
T ss_pred             ecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcC--CcCCcee-cccccce
Confidence            8777765432111111111111111        1      12568999999999665543  2455555 4445443

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=8.1e-08  Score=79.69  Aligned_cols=174  Identities=6%  Similarity=-0.068  Sum_probs=113.4

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .++.++.+|+++.+.+.+++...           .+++++|.|+...  .....+.....+++|+.|+..+++++..+-.
T Consensus        56 ~~~~~~~~Dl~d~~~~~~~~~~~-----------~~~~v~~~~a~~~--~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~  122 (347)
T d1t2aa_          56 GNMKLHYGDLTDSTCLVKIINEV-----------KPTEIYNLGAQSH--VKISFDLAEYTADVDGVGTLRLLDAVKTCGL  122 (347)
T ss_dssp             -CEEEEECCTTCHHHHHHHHHHH-----------CCSEEEECCSCCC--HHHHHHSHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred             CCcEEEEeecCCchhhHHHHhhc-----------ccceeeeeeeccc--cchhhccchhhhhhHHHHHHHHHHHHHHcCC
Confidence            46899999999999998888654           4678888887642  1223344567789999999999988865533


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                      ..  ..++|++||.+.+.....         ....|..+..+...|+.+|.+.+.++..+++.+      ++.+..+.|+
T Consensus       123 ~~--~~~~i~~SS~~vyg~~~~---------~~~~E~~~~~P~~~Yg~sK~~aE~~~~~~~~~~------~~~~~ilr~~  185 (347)
T d1t2aa_         123 IN--SVKFYQASTSELYGKVQE---------IPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY------NLFAVNGILF  185 (347)
T ss_dssp             TT--TCEEEEEEEGGGTCSCSS---------SSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCEEEEEEEC
T ss_pred             CC--CcEEEEecchheecCCCC---------CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh------CCCEEEEEec
Confidence            22  358999999776542111         112223344456779999999999999888775      5677778888


Q ss_pred             cccCCccCcchhHHHHHHHHHHHHh--------------hcCCCHHHHHHHHHHHhcC
Q 024553          171 VVKTNIMREVPSFLSLMAFTVLKLL--------------GLLQSPEKGINSVLDAALA  214 (266)
Q Consensus       171 ~v~T~~~~~~~~~~~~~~~~~~~~~--------------~~~~~p~~~a~~~~~~~~~  214 (266)
                      .+..+....................              +.+...+|++++++.++..
T Consensus       186 ~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~~~~~~~  243 (347)
T d1t2aa_         186 NHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQN  243 (347)
T ss_dssp             CEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHS
T ss_pred             ceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHHHHHHHhhc
Confidence            8877643322111111111111111              1245789999999866544

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=98.78  E-value=5.7e-08  Score=80.73  Aligned_cols=192  Identities=14%  Similarity=0.071  Sum_probs=114.0

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      ...++.+|+++.+++..++             ..+|+++|+|+....     .......+.+|+.|+..+++.+...   
T Consensus        63 ~~~~~~~Dl~~~~~~~~~~-------------~~~~~v~~~a~~~~~-----~~~~~~~~~~nv~gt~~ll~~~~~~---  121 (342)
T d1y1pa1          63 FETAVVEDMLKQGAYDEVI-------------KGAAGVAHIASVVSF-----SNKYDEVVTPAIGGTLNALRAAAAT---  121 (342)
T ss_dssp             EEEEECSCTTSTTTTTTTT-------------TTCSEEEECCCCCSC-----CSCHHHHHHHHHHHHHHHHHHHHTC---
T ss_pred             ccEEEeccccchhhhhhhc-------------ccchhhhhhcccccc-----cccccccccchhhhHHHHHHhhhcc---
Confidence            3455777888877654433             357899999987532     1234677889999999888887442   


Q ss_pred             CCCCCeEEEEcCCcccccccccCC-----cc-----cc-ccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCC
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVN-----NE-----TI-TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSR  160 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~-----~~-----~~-~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~  160 (266)
                       ....++|++||..+.........     ..     .+ ......+..+..+...|+.+|.+.+.++..+++..    ..
T Consensus       122 -~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~  196 (342)
T d1y1pa1         122 -PSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDEN----KP  196 (342)
T ss_dssp             -TTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHH----CC
T ss_pred             -cccccccccccceeeccCCCCCCCccccccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhc----cc
Confidence             11569999999764322111000     00     00 00011223344456789999999999999999887    46


Q ss_pred             CeEEEEecCCcccCCccCcchh---HHHHHHHHHH----HH-----hhcCCCHHHHHHHHHHHhcCCCCcccceeecCCC
Q 024553          161 HVSVIAADPGVVKTNIMREVPS---FLSLMAFTVL----KL-----LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKG  228 (266)
Q Consensus       161 ~i~v~~v~PG~v~T~~~~~~~~---~~~~~~~~~~----~~-----~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g  228 (266)
                      ++.+..++|+.+-.+.......   ...+......    ..     ...+..++++|++++.++.. +...|.++.. .+
T Consensus       197 ~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~v~v~Dva~~~i~~l~~-~~~~g~~~~~-~~  274 (342)
T d1y1pa1         197 HFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVL-PQIERRRVYG-TA  274 (342)
T ss_dssp             SSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHC-TTCCSCEEEE-CC
T ss_pred             ccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcccCCccceeeeeHHHHHHHHHHhhcC-ccccceEEEE-cC
Confidence            7888899999887764432111   1111111000    00     01245789999998865554 4456666653 34


Q ss_pred             ccc
Q 024553          229 RTV  231 (266)
Q Consensus       229 ~~~  231 (266)
                      +..
T Consensus       275 ~~~  277 (342)
T d1y1pa1         275 GTF  277 (342)
T ss_dssp             EEE
T ss_pred             Cce
Confidence            444

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=98.78  E-value=1.6e-08  Score=84.06  Aligned_cols=135  Identities=13%  Similarity=-0.029  Sum_probs=97.9

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .++.++++|+++.+.+.++++.           .++|+|||+|+...  ...+.++.++.+++|+.|+..+++.+...  
T Consensus        50 ~~~~~~~~Dl~d~~~l~~~~~~-----------~~~d~ViHlAa~~~--~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~--  114 (338)
T d1udca_          50 KHPTFVEGDIRNEALMTEILHD-----------HAIDTVIHFAGLKA--VGESVQKPLEYYDNNVNGTLRLISAMRAA--  114 (338)
T ss_dssp             SCCEEEECCTTCHHHHHHHHHH-----------TTCSEEEECCSCCC--HHHHHHCHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred             CCCEEEEeecCCHHHHHHHHhc-----------cCCCEEEECCCccc--hhhHHhCHHHHHHhHHHHHHHHHHHHHHh--
Confidence            4688999999999998887753           36899999999742  12233456789999999999999988654  


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                        + -.++|++||.+.+...+.....+        +.....+...|+.+|.+.+.+++....+.     .++.+..+.|+
T Consensus       115 --~-v~~~i~~Ss~~vy~~~~~~~~~e--------~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~~ilR~~  178 (338)
T d1udca_         115 --N-VKNFIFSSSATVYGDQPKIPYVE--------SFPTGTPQSPYGKSKLMVEQILTDLQKAQ-----PDWSIALLRYF  178 (338)
T ss_dssp             --T-CCEEEEEEEGGGGCSCCSSSBCT--------TSCCCCCSSHHHHHHHHHHHHHHHHHHHS-----TTCEEEEEEEC
T ss_pred             --C-CCEEEecCcceEEcccccccccc--------ccccCCCcchHHHHHhhhhHHHHHHHhhc-----cCCeEEEEeec
Confidence              2 35899999987654332221111        12234456789999999999998877774     47788888888


Q ss_pred             cccCCc
Q 024553          171 VVKTNI  176 (266)
Q Consensus       171 ~v~T~~  176 (266)
                      .+.++.
T Consensus       179 ~v~G~~  184 (338)
T d1udca_         179 NPVGAH  184 (338)
T ss_dssp             EEECCC
T ss_pred             cEEecc
Confidence            877653

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=98.74  E-value=1.9e-07  Score=77.52  Aligned_cols=194  Identities=12%  Similarity=0.065  Sum_probs=119.8

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      +.++.++.+|+.+.+.+..++             ...+.++|.|+.....  ....+.++.+++|+.|+..++..+... 
T Consensus        51 ~~~i~~~~~Di~d~~~~~~~~-------------~~~~~v~~~a~~~~~~--~~~~~~~~~~~~N~~g~~nll~~~~~~-  114 (346)
T d1oc2a_          51 GDRVELVVGDIADAELVDKLA-------------AKADAIVHYAAESHND--NSLNDPSPFIHTNFIGTYTLLEAARKY-  114 (346)
T ss_dssp             SSSEEEEECCTTCHHHHHHHH-------------TTCSEEEECCSCCCHH--HHHHCCHHHHHHHTHHHHHHHHHHHHH-
T ss_pred             cCCeEEEEccCCCHHHHHHHH-------------hhhhhhhhhhhccccc--chhhCcccceeeehHhHHhhhhhhccc-
Confidence            357899999999999987765             2466788988876422  122345788999999999998877443 


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCc---cccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEE
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNN---ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA  166 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~  166 (266)
                           ..++|++||...+...+..-+.   .........+..+..+...|+.+|.+.+.+++.+.++.      ++.++.
T Consensus       115 -----~~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~------~i~~~i  183 (346)
T d1oc2a_         115 -----DIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF------GVKATI  183 (346)
T ss_dssp             -----TCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCEEEE
T ss_pred             -----cccccccccceEecccCccccccccccCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc------CCCEEE
Confidence                 3478888887665432111000   01111122223344445679999999999999888764      789999


Q ss_pred             ecCCcccCCccCcchhHHHHHHHHHHH----------HhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          167 ADPGVVKTNIMREVPSFLSLMAFTVLK----------LLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       167 v~PG~v~T~~~~~~~~~~~~~~~~~~~----------~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      +.|+.+..|..................          ..+.+...+|++++++.+.. .+...+.|+. .+++...
T Consensus       184 lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~~~-~~~~~~~~~~-~~~~~~~  257 (346)
T d1oc2a_         184 SNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILT-KGRMGETYLI-GADGEKN  257 (346)
T ss_dssp             EEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHH-HCCTTCEEEE-CCSCEEE
T ss_pred             EeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHHHHHh-hcccCccccc-ccccccc
Confidence            999999876433221111111111111          01135688999999885443 3444555555 4555443

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.72  E-value=3.2e-08  Score=82.39  Aligned_cols=137  Identities=16%  Similarity=0.041  Sum_probs=96.7

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .++.++.+|+++.++++.++..           .++|+|||+|+...+.  ...+.-+..+.+|+.++..+++.+...- 
T Consensus        51 ~~v~~~~~Dl~d~~~l~~~~~~-----------~~~d~VihlAa~~~~~--~~~~~~~~~~~~N~~~t~~ll~~~~~~~-  116 (347)
T d1z45a2          51 HHIPFYEVDLCDRKGLEKVFKE-----------YKIDSVIHFAGLKAVG--ESTQIPLRYYHNNILGTVVLLELMQQYN-  116 (347)
T ss_dssp             SCCCEEECCTTCHHHHHHHHHH-----------SCCCEEEECCSCCCHH--HHHHSHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             cCCeEEEeecCCHHHHHHHHhc-----------cCCCEEEEcccccccc--ccccCcccccccchhhhHHHHHHHHhcc-
Confidence            3578899999999999887742           3689999999986321  1233456788999999999999885432 


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                          -.++|++||...+...........+     .+..+..+...|+.+|.+.+.+++.+.+..    ..++.+..+.|+
T Consensus       117 ----i~~~i~~SS~~vyg~~~~~~~~~~~-----~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~~~lR~~  183 (347)
T d1z45a2         117 ----VSKFVFSSSATVYGDATRFPNMIPI-----PEECPLGPTNPYGHTKYAIENILNDLYNSD----KKSWKFAILRYF  183 (347)
T ss_dssp             ----CCEEEEEEEGGGGCCGGGSTTCCSB-----CTTSCCCCCSHHHHHHHHHHHHHHHHHHHS----TTSCEEEEEEEC
T ss_pred             ----cceEEeecceeeecCcccCCCCCcc-----ccccCCCCCChhHhHHHHHHHHHHHHHHhh----ccCCcEEEEeec
Confidence                3589999998876543322222111     123344445679999999999999888765    467777777766


Q ss_pred             cccC
Q 024553          171 VVKT  174 (266)
Q Consensus       171 ~v~T  174 (266)
                      .+..
T Consensus       184 ~v~g  187 (347)
T d1z45a2         184 NPIG  187 (347)
T ss_dssp             EEEC
T ss_pred             ceEe
Confidence            5543

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=98.68  E-value=4e-07  Score=75.30  Aligned_cols=191  Identities=8%  Similarity=0.075  Sum_probs=117.6

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      ..++.++.+|+++.+++.+.+   ..         .+|+|||+|+......  ..+...+.+.+|+.|+..+++.+..  
T Consensus        44 ~~~~~~i~~Di~~~~~~~~~~---~~---------~~d~Vih~a~~~~~~~--~~~~~~~~~~~nv~gt~~ll~~~~~--  107 (342)
T d2blla1          44 HPHFHFVEGDISIHSEWIEYH---VK---------KCDVVLPLVAIATPIE--YTRNPLRVFELDFEENLRIIRYCVK--  107 (342)
T ss_dssp             CTTEEEEECCTTTCSHHHHHH---HH---------HCSEEEECBCCCCHHH--HHHSHHHHHHHHTHHHHHHHHHHHH--
T ss_pred             CCCeEEEECccCChHHHHHHH---Hh---------CCCccccccccccccc--cccCCcccccccccccccccccccc--
Confidence            357899999999887765533   12         4899999999864321  2344567899999999999998733  


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                        .  +.+++++||...+.........+..  ....+.....+...|+.+|.+.+.+++.+++.+      ++.+..+.|
T Consensus       108 --~--~~~~~~~ss~~~~~~~~~~~~~~~~--~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~------~~~~~i~r~  175 (342)
T d2blla1         108 --Y--RKRIIFPSTSEVYGMCSDKYFDEDH--SNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE------GLQFTLFRP  175 (342)
T ss_dssp             --T--TCEEEEECCGGGGBTCCCSSBCTTT--CCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH------CCCEEEEEE
T ss_pred             --c--ccccccccccccccccccccccccc--ccccccccCCCcchhhhcccchhhhhhhhhccc------CceeEEeec
Confidence              2  3477778876655433222111110  011112333455789999999999999888885      566777777


Q ss_pred             CcccCCccCcc-------hhHHHHHHHHHHH--H---h------hcCCCHHHHHHHHHHHhcCCC-CcccceeecCCC
Q 024553          170 GVVKTNIMREV-------PSFLSLMAFTVLK--L---L------GLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKG  228 (266)
Q Consensus       170 G~v~T~~~~~~-------~~~~~~~~~~~~~--~---~------~~~~~p~~~a~~~~~~~~~~~-~~~G~~~~~~~g  228 (266)
                      ..+..+.....       .............  +   .      +.+...+++++++..++..+. ...|..|+.+.|
T Consensus       176 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~  253 (342)
T d2blla1         176 FNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNP  253 (342)
T ss_dssp             CSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCT
T ss_pred             cccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceeeeehhhccccCCCeEEEEecc
Confidence            77765533221       1111111111110  0   1      125689999999997766543 455777765544

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.63  E-value=9.9e-07  Score=72.59  Aligned_cols=183  Identities=10%  Similarity=-0.076  Sum_probs=117.7

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      ..+.++.+|+++.+++.+.++..           ++|+|||+|+....  ....+.-...+.+|+.++..++..+.....
T Consensus        56 ~~~~~~~~Di~~~~~~~~~~~~~-----------~~D~Vih~Aa~~~~--~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~  122 (339)
T d1n7ha_          56 ALMKLHYADLTDASSLRRWIDVI-----------KPDEVYNLAAQSHV--AVSFEIPDYTADVVATGALRLLEAVRSHTI  122 (339)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHH-----------CCSEEEECCSCCCH--HHHHHSHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             cceEEEEccccCHHHHHHHHhhh-----------ccchhhhccccccc--cccccCccccccccccccchhhhhhhhccc
Confidence            46889999999999998877532           68999999998532  112345578899999999999988876554


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                      ......+++..||..........+          .|..+..+...|+.+|.+.+.++..+.+.+      ++.+..+.|+
T Consensus       123 ~~~~~~~~~~~ss~~~~~~~~~~~----------~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~------~~~~~ilR~~  186 (339)
T d1n7ha_         123 DSGRTVKYYQAGSSEMFGSTPPPQ----------SETTPFHPRSPYAASKCAAHWYTVNYREAY------GLFACNGILF  186 (339)
T ss_dssp             HHCCCCEEEEEEEGGGGTTSCSSB----------CTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCEEEEEEEC
T ss_pred             ccccceeeeecccceecccCCCCC----------CCCCCCCCcchhhHHHHHHHHHHHHHHHHh------CCCEEEEEEc
Confidence            432144666666655433222212          223344556789999999999999888775      5788889999


Q ss_pred             cccCCccCcchhHHHHHHHHHHHHh--------------hcCCCHHHHHHHHHHHhcCCCCccccee
Q 024553          171 VVKTNIMREVPSFLSLMAFTVLKLL--------------GLLQSPEKGINSVLDAALAPPETSGVYF  223 (266)
Q Consensus       171 ~v~T~~~~~~~~~~~~~~~~~~~~~--------------~~~~~p~~~a~~~~~~~~~~~~~~G~~~  223 (266)
                      .|..|....................              +.+...+|+|+++..++.. +...+.++
T Consensus       187 ~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~~~~~~~~~-~~~~~~~~  252 (339)
T d1n7ha_         187 NHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQ-EKPDDYVV  252 (339)
T ss_dssp             CEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTS-SSCCEEEE
T ss_pred             cccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHHHHHHHHhc-CCCCcccc
Confidence            8888754432111111111111111              1245799999999855444 33334443

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.59  E-value=2.3e-07  Score=76.88  Aligned_cols=186  Identities=10%  Similarity=-0.021  Sum_probs=118.5

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      .+.++.+|+.+........             ...+.++|.++....  ..+.++....+.+|+.|+..+++.+...   
T Consensus        71 ~~~~~~~d~~d~~~~~~~~-------------~~~~~v~~~~a~~~~--~~~~~~~~~~~~~Nv~gt~~ll~~~~~~---  132 (341)
T d1sb8a_          71 NFKFIQGDIRNLDDCNNAC-------------AGVDYVLHQAALGSV--PRSINDPITSNATNIDGFLNMLIAARDA---  132 (341)
T ss_dssp             TEEEEECCTTSHHHHHHHH-------------TTCSEEEECCSCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHT---
T ss_pred             CeeEEeecccccccccccc-------------ccccccccccccccc--cccccCccchhheeehhHHHHHHHHHhc---
Confidence            5788999999888765433             356778888776432  1235567889999999999999988442   


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCc
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV  171 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~  171 (266)
                       + ..++|++||...+...+...         ..|..+..+...|+.+|.+.+.+++.+++..      ++.+..+.|+.
T Consensus       133 -~-~~~~i~~SS~~vyg~~~~~~---------~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~------~i~~~ilR~~~  195 (341)
T d1sb8a_         133 -K-VQSFTYAASSSTYGDHPGLP---------KVEDTIGKPLSPYAVTKYVNELYADVFSRCY------GFSTIGLRYFN  195 (341)
T ss_dssp             -T-CSEEEEEEEGGGGTTCCCSS---------BCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH------CCCCEEEEECC
T ss_pred             -C-CceEEEcccceeeCCCCCCC---------ccCCCCCCCCCcchHHHHHHHHHHHHHHHHh------CCCeEEEEece
Confidence             3 45999999988765322211         1223344455789999999999999988775      56777888888


Q ss_pred             ccCCccCcchh---HHHHHHHHHH--HHh---------hcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          172 VKTNIMREVPS---FLSLMAFTVL--KLL---------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       172 v~T~~~~~~~~---~~~~~~~~~~--~~~---------~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      +.++.......   ..........  .++         +.+...++++.++..++.......|..|....++...
T Consensus       196 v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~s  270 (341)
T d1sb8a_         196 VFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQVYNIAVGGRTS  270 (341)
T ss_dssp             EECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEE
T ss_pred             eeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhhhhhccccccceeeeecccccch
Confidence            77654332111   1111111111  001         1245779999998866655544556555545555554

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.52  E-value=1.1e-06  Score=71.73  Aligned_cols=167  Identities=12%  Similarity=-0.015  Sum_probs=104.2

Q ss_pred             CCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCCCCeEEEEcCCcccccccc-cCCccccccC
Q 024553           44 SSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-QVNNETITGK  122 (266)
Q Consensus        44 ~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~-~~~~~~~~~~  122 (266)
                      ..+|+|||+|+....  ....++.++.+++|+.++..+++++..    .  +.++|++||.+.+..... ..+.+..   
T Consensus        64 ~~~d~VihlAa~~~~--~~~~~~~~~~~~~Nv~g~~~ll~~~~~----~--~~k~I~~SS~~vy~~~~~~~~~e~~~---  132 (312)
T d2b69a1          64 IEVDQIYHLASPASP--PNYMYNPIKTLKTNTIGTLNMLGLAKR----V--GARLLLASTSEVYGDPEVHPQSEDYW---  132 (312)
T ss_dssp             CCCSEEEECCSCCSH--HHHTTCHHHHHHHHHHHHHHHHHHHHH----H--TCEEEEEEEGGGGBSCSSSSBCTTCC---
T ss_pred             cCCCEEEECcccCCc--hhHHhCHHHHHHHHHHHHHHHHHHHHH----c--CCcEEEEEChheecCCCCCCCCcccc---
Confidence            468999999997532  112345678899999999999987743    2  248999999876643211 1111111   


Q ss_pred             cccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcccCCccCcchh-HHHHHHHHHH--HH-----
Q 024553          123 FFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-FLSLMAFTVL--KL-----  194 (266)
Q Consensus       123 ~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~--~~-----  194 (266)
                        .+..+..+...|+.+|.+.+.+++.+++.+      ++.+..+.|+.|..+....... ..........  .+     
T Consensus       133 --~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~------~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~  204 (312)
T d2b69a1         133 --GHVNPIGPRACYDEGKRVAETMCYAYMKQE------GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYG  204 (312)
T ss_dssp             --CBCCSSSTTHHHHHHHHHHHHHHHHHHHHH------CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEES
T ss_pred             --CCCCCCCCccHHHHHHHHHHHHHHHHHHHh------CCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeC
Confidence              113344556789999999999999988885      6788899999998765432111 1111111110  01     


Q ss_pred             ----hhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          195 ----LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       195 ----~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                          .+.+...+|++++++.++ . ....|.| ..+.|+...
T Consensus       205 ~g~~~r~~i~v~D~~~~~~~~~-~-~~~~~~~-n~~~~~~~~  243 (312)
T d2b69a1         205 SGSQTRAFQYVSDLVNGLVALM-N-SNVSSPV-NLGNPEEHT  243 (312)
T ss_dssp             SSCCEEECEEHHHHHHHHHHHH-T-SSCCSCE-EESCCCEEE
T ss_pred             CCCeeEccEEHHHHHHHHHHHH-h-hccCCce-EecCCcccc
Confidence                112457899999998544 2 2344555 445666554

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=1.4e-06  Score=71.98  Aligned_cols=135  Identities=14%  Similarity=0.050  Sum_probs=93.5

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      ..++.++.+|++|.+.+.+++..           ..+++++|.|+....  ..+.++..+.+++|+.|+..+++++..  
T Consensus        57 ~~~~~~~~~Dl~d~~~l~~~~~~-----------~~~~~i~h~Aa~~~~--~~~~~~p~~~~~~Nv~gt~~l~~~~~~--  121 (346)
T d1ek6a_          57 GRSVEFEEMDILDQGALQRLFKK-----------YSFMAVIHFAGLKAV--GESVQKPLDYYRVNLTGTIQLLEIMKA--  121 (346)
T ss_dssp             TCCCEEEECCTTCHHHHHHHHHH-----------CCEEEEEECCSCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHHH--
T ss_pred             CCCcEEEEeeccccccccccccc-----------cccccccccccccCc--HhhHhCHHHHHHhhhcccccccchhhh--
Confidence            34688999999999998877642           468899999997542  222334568899999999988887733  


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                        .+ -.+++++||...+..........        +.........|+.+|...+..++.+++..     .++....+.|
T Consensus       122 --~~-v~~~i~~ss~~~~~~~~~~~~~~--------~~~~~~~~~~Y~~~k~~~e~~~~~~~~~~-----~~~~~~~lR~  185 (346)
T d1ek6a_         122 --HG-VKNLVFSSSATVYGNPQYLPLDE--------AHPTGGCTNPYGKSKFFIEEMIRDLCQAD-----KTWNAVLLRY  185 (346)
T ss_dssp             --TT-CCEEEEEEEGGGGCSCSSSSBCT--------TSCCCCCSSHHHHHHHHHHHHHHHHHHHC-----TTCEEEEEEE
T ss_pred             --cC-cccccccccceeeeccccccccc--------cccccccCChHHHHHHHHHHHHHHHHHhc-----cCCceEEEee
Confidence              33 35899998877654322211111        11122334579999999999998887763     5777777778


Q ss_pred             CcccCC
Q 024553          170 GVVKTN  175 (266)
Q Consensus       170 G~v~T~  175 (266)
                      +.+.++
T Consensus       186 ~~v~G~  191 (346)
T d1ek6a_         186 FNPTGA  191 (346)
T ss_dssp             CEEECC
T ss_pred             cceecc
Confidence            777654

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=98.44  E-value=8.6e-07  Score=72.30  Aligned_cols=133  Identities=11%  Similarity=0.037  Sum_probs=92.1

Q ss_pred             EecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCCCC
Q 024553           17 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPS   96 (266)
Q Consensus        17 ~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~   96 (266)
                      .+|+.+.+.+..+++.           ..+|.++|+|+..... ........+.+++|+.++..++.++...    + -.
T Consensus        37 ~~~~~~~~~~~~~~~~-----------~~~d~v~~~a~~~~~~-~~~~~~~~~~~~~Nv~gt~~ll~~a~~~----~-v~   99 (315)
T d1e6ua_          37 ELNLLDSRAVHDFFAS-----------ERIDQVYLAAAKVGGI-VANNTYPADFIYQNMMIESNIIHAAHQN----D-VN   99 (315)
T ss_dssp             TCCTTCHHHHHHHHHH-----------HCCSEEEECCCCCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHHT----T-CC
T ss_pred             hccccCHHHHHHHHhh-----------cCCCEEEEcchhcccc-ccchhhHHHHHHHHHHHHHHHHHHHHHc----C-CC
Confidence            4678888888776642           3689999999875421 1233445677899999999998888443    2 45


Q ss_pred             eEEEEcCCcccccccc-cCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcccCC
Q 024553           97 RIVNVTSFTHRNVFNA-QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN  175 (266)
Q Consensus        97 ~iv~vsS~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~T~  175 (266)
                      ++|++||.+.+..... .++.+..     .+..+.+....|+.+|.+.+.+++.+.++.      ++.+..+.|+.|..+
T Consensus       100 ~~i~~SS~~vyg~~~~~~~~E~~~-----~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~------gl~~~ilR~~~vyGp  168 (315)
T d1e6ua_         100 KLLFLGSSCIYPKLAKQPMAESEL-----LQGTLEPTNEPYAIAKIAGIKLCESYNRQY------GRDYRSVMPTNLYGP  168 (315)
T ss_dssp             EEEEECCGGGSCTTCCSSBCGGGT-----TSSCCCGGGHHHHHHHHHHHHHHHHHHHHH------CCEEEEEEECEEEST
T ss_pred             EEEEECCceEcCCCCCCCccCCcc-----ccCCCCCCCCHHHHHHHHHHHHHHHHHHHh------CCCEEEEeeccEECC
Confidence            8999999887653221 1221111     112333445679999999999999988774      678999999998876


Q ss_pred             cc
Q 024553          176 IM  177 (266)
Q Consensus       176 ~~  177 (266)
                      ..
T Consensus       169 ~~  170 (315)
T d1e6ua_         169 HD  170 (315)
T ss_dssp             TC
T ss_pred             CC
Confidence            44

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=98.37  E-value=1.9e-06  Score=70.65  Aligned_cols=127  Identities=13%  Similarity=0.009  Sum_probs=82.4

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      .++.++.+|+++.+++.++++..           ++|+|||+|+....  ....++.+..+++|+.|+..+++.+...  
T Consensus        49 ~~~~~i~~Di~~~~~l~~~~~~~-----------~~d~Vih~aa~~~~--~~~~~~~~~~~~~Nv~gt~nll~~~~~~--  113 (338)
T d1orra_          49 GNFEFVHGDIRNKNDVTRLITKY-----------MPDSCFHLAGQVAM--TTSIDNPCMDFEINVGGTLNLLEAVRQY--  113 (338)
T ss_dssp             CCCEEEECCTTCHHHHHHHHHHH-----------CCSEEEECCCCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred             CCcEEEEcccCCHHHHHHHHHhc-----------CCceEEeecccccc--cccccChHHHHHHHHHHHHHHHHhhhcc--
Confidence            46889999999999998877544           58999999998632  1223455789999999999999877543  


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCcc--------ccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNE--------TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLG  155 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~  155 (266)
                        + ..+.++.+|..............        ..............+...|+.+|...+.+.....+.+.
T Consensus       114 --~-~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~  183 (338)
T d1orra_         114 --N-SNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFG  183 (338)
T ss_dssp             --C-TTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             --c-ccccccccccccccccccccccccccccccccccccCcccCCccccccccccccchhhhhhhhhhhccC
Confidence              2 33455555544322221111100        01111111233445567899999999999988888864

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.37  E-value=8.8e-06  Score=67.51  Aligned_cols=190  Identities=11%  Similarity=-0.021  Sum_probs=116.8

Q ss_pred             EEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcC
Q 024553           13 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS   92 (266)
Q Consensus        13 ~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~   92 (266)
                      ..+..+|+.+.+.+.++.             ..+|.+||.|+..... ....+.....+.+|+.++..++.++...    
T Consensus        60 ~~~~~~D~~~~~~~~~~~-------------~~~d~Vih~a~~~~~~-~~~~~~~~~~~~~n~~gt~~ll~~~~~~----  121 (363)
T d2c5aa1          60 DEFHLVDLRVMENCLKVT-------------EGVDHVFNLAADMGGM-GFIQSNHSVIMYNNTMISFNMIEAARIN----  121 (363)
T ss_dssp             SEEEECCTTSHHHHHHHH-------------TTCSEEEECCCCCCCH-HHHTTCHHHHHHHHHHHHHHHHHHHHHT----
T ss_pred             CcEEEeechhHHHHHHHh-------------hcCCeEeecccccccc-cccccccccccccccchhhHHHHhHHhh----
Confidence            467888999888775544             2589999999886432 2234567889999999999988887443    


Q ss_pred             CCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcc
Q 024553           93 PVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVV  172 (266)
Q Consensus        93 ~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v  172 (266)
                      + -.++|++||...+.........+.-  ....+..+..+...|+.+|.+.+.+++.+.+++      ++.+..+.|+.+
T Consensus       122 ~-vk~~i~~SS~~~~~~~~~~~~~~~~--~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~------gl~~~ilR~~~v  192 (363)
T d2c5aa1         122 G-IKRFFYASSACIYPEFKQLETTNVS--LKESDAWPAEPQDAFGLEKLATEELCKHYNKDF------GIECRIGRFHNI  192 (363)
T ss_dssp             T-CSEEEEEEEGGGSCGGGSSSSSSCE--ECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH------CCEEEEEEECCE
T ss_pred             C-ccccccccccccccccccccccccc--cccccCCcCCCCCHHHHHHHHHHHHHHHHHHHh------CCCEEEEEeeeE
Confidence            2 4599999998766543222111110  000112233345679999999999999888774      678888999888


Q ss_pred             cCCccCcch--hHHHHHHHHHHHH-------------hhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          173 KTNIMREVP--SFLSLMAFTVLKL-------------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       173 ~T~~~~~~~--~~~~~~~~~~~~~-------------~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      .++......  .............             .+.+...++++++++.++. . ...+. |..+.|+.+.
T Consensus       193 yG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~~-~-~~~~~-~ni~~~~~~s  264 (363)
T d2c5aa1         193 YGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTK-S-DFREP-VNIGSDEMVS  264 (363)
T ss_dssp             ECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHH-S-SCCSC-EEECCCCCEE
T ss_pred             eccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHHHHHHh-C-CCCCe-EEEecCCccc
Confidence            776433211  1111111111010             1125678899999885543 2 23344 4445666554

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=98.35  E-value=1.4e-06  Score=73.07  Aligned_cols=143  Identities=11%  Similarity=-0.062  Sum_probs=97.5

Q ss_pred             CccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHH
Q 024553           10 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL   89 (266)
Q Consensus        10 ~~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   89 (266)
                      ...+.++.+|++|.+.+++++++.          .++|+|+|.|+.....  ...+.....+.+|+.++..++..+..  
T Consensus        68 ~~~~~~~~~Di~d~~~l~~~~~~~----------~~~d~ViH~Aa~~~~~--~~~~~~~~~~~~N~~~t~~~l~~~~~--  133 (383)
T d1gy8a_          68 DRYAALEVGDVRNEDFLNGVFTRH----------GPIDAVVHMCAFLAVG--ESVRDPLKYYDNNVVGILRLLQAMLL--  133 (383)
T ss_dssp             TCCCEEEESCTTCHHHHHHHHHHS----------CCCCEEEECCCCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHH--
T ss_pred             ccceEEEECcccCHHHhhhhhhcc----------ceeehhhccccccccc--ccccccccccccccccccccchhhhc--
Confidence            346889999999999998888644          4689999999986421  22344567889999999999888753  


Q ss_pred             hcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecC
Q 024553           90 KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  169 (266)
Q Consensus        90 ~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~P  169 (266)
                        .+ ..++++++|...+.........  .......+.....+...|+.+|.+.+.+++.+...+      ++.+..+.|
T Consensus       134 --~~-~~~~~~~~s~~~~~~~~~~~~~--~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~------gl~~~~lR~  202 (383)
T d1gy8a_         134 --HK-CDKIIFSSSAAIFGNPTMGSVS--TNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY------GIKGICLRY  202 (383)
T ss_dssp             --TT-CCEEEEEEEGGGTBSCCC-------CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH------CCEEEEEEE
T ss_pred             --cC-Cccccccccccccccccccccc--ccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh------CCCEEEEec
Confidence              22 4577777776644322111110  001112223445556789999999999999888775      678888888


Q ss_pred             CcccCCcc
Q 024553          170 GVVKTNIM  177 (266)
Q Consensus       170 G~v~T~~~  177 (266)
                      +.+..+..
T Consensus       203 ~~vyG~~~  210 (383)
T d1gy8a_         203 FNACGAHE  210 (383)
T ss_dssp             CEEECCCT
T ss_pred             ceeeccCc
Confidence            88876544

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=2e-05  Score=60.04  Aligned_cols=151  Identities=13%  Similarity=-0.023  Sum_probs=88.8

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      ..+.++.+|+++.+++.+++             ...|+||+++|...+..         ...++..++..+++    .++
T Consensus        46 ~~~~~~~gD~~d~~~l~~al-------------~~~d~vi~~~g~~~~~~---------~~~~~~~~~~~l~~----aa~   99 (205)
T d1hdoa_          46 RPAHVVVGDVLQAADVDKTV-------------AGQDAVIVLLGTRNDLS---------PTTVMSEGARNIVA----AMK   99 (205)
T ss_dssp             CCSEEEESCTTSHHHHHHHH-------------TTCSEEEECCCCTTCCS---------CCCHHHHHHHHHHH----HHH
T ss_pred             cccccccccccchhhHHHHh-------------cCCCEEEEEeccCCchh---------hhhhhHHHHHHHHH----HHH
Confidence            45889999999999887665             25799999999753221         12344445544444    445


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                      +.+ -.++|++||......      .          ....+....|...|...+.+.+          ..++....|.||
T Consensus       100 ~~~-v~r~i~~ss~~~~~~------~----------~~~~~~~~~~~~~~~~~e~~l~----------~~~~~~tiirp~  152 (205)
T d1hdoa_         100 AHG-VDKVVACTSAFLLWD------P----------TKVPPRLQAVTDDHIRMHKVLR----------ESGLKYVAVMPP  152 (205)
T ss_dssp             HHT-CCEEEEECCGGGTSC------T----------TCSCGGGHHHHHHHHHHHHHHH----------HTCSEEEEECCS
T ss_pred             hcC-CCeEEEEeeeeccCC------C----------ccccccccccchHHHHHHHHHH----------hcCCceEEEecc
Confidence            544 569999998664221      0          1122333456666666554432          357889999999


Q ss_pred             cccCCccC-cchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccc
Q 024553          171 VVKTNIMR-EVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGV  221 (266)
Q Consensus       171 ~v~T~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~  221 (266)
                      ++...... .......      ......+.+.+++|+.++.++..++ ..|+
T Consensus       153 ~~~~~~~~~~~~~~~~------~~~~~~~i~~~DvA~~~~~~l~~~~-~~g~  197 (205)
T d1hdoa_         153 HIGDQPLTGAYTVTLD------GRGPSRVISKHDLGHFMLRCLTTDE-YDGH  197 (205)
T ss_dssp             EEECCCCCSCCEEESS------SCSSCSEEEHHHHHHHHHHTTSCST-TTTC
T ss_pred             eecCCCCcccEEEeeC------CCCCCCcCCHHHHHHHHHHHhCCCC-CCCE
Confidence            88533221 1100000      0000123589999999998776654 3344

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=97.82  E-value=4.3e-05  Score=62.83  Aligned_cols=141  Identities=15%  Similarity=0.095  Sum_probs=93.8

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      ..+.++.+|+++.+.+.++.+..           .+|+++|.|+....  ..+.+..+..+.+|+.|+..+++.+...- 
T Consensus        56 ~~i~~~~~Dl~d~~~l~~~~~~~-----------~~~~v~~~aa~~~~--~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~-  121 (356)
T d1rkxa_          56 DGMQSEIGDIRDQNKLLESIREF-----------QPEIVFHMAAQPLV--RLSYSEPVETYSTNVMGTVYLLEAIRHVG-  121 (356)
T ss_dssp             TTSEEEECCTTCHHHHHHHHHHH-----------CCSEEEECCSCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHHC-
T ss_pred             cCCeEEEeeccChHhhhhhhhhc-----------hhhhhhhhhccccc--cccccCCccccccccccchhhhhhhhccc-
Confidence            35899999999999988877533           57899999987532  22345567899999999999888885432 


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCC---CCCCeEEEEe
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLD---KSRHVSVIAA  167 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~---~~~~i~v~~v  167 (266)
                        . ...++..||............        ..+.....+...|+.+|...+.+++.++.++...   ...++.+..+
T Consensus       122 --~-~~~~~~~s~~~~~~~~~~~~~--------~~~~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (356)
T d1rkxa_         122 --G-VKAVVNITSDKCYDNKEWIWG--------YRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATV  190 (356)
T ss_dssp             --C-CCEEEEECCGGGBCCCCSSSC--------BCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEE
T ss_pred             --c-ccccccccccccccccccccc--------cccccccCCCCccccccccchhhhhHHhhhcccchhccccCceEEec
Confidence              1 345555555443221111111        1112334446779999999999998888766421   1246788888


Q ss_pred             cCCcccCCc
Q 024553          168 DPGVVKTNI  176 (266)
Q Consensus       168 ~PG~v~T~~  176 (266)
                      .|+.+..+-
T Consensus       191 r~~~vyGp~  199 (356)
T d1rkxa_         191 RAGNVIGGG  199 (356)
T ss_dssp             ECCCEECTT
T ss_pred             cCCCeeCCC
Confidence            888877654

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.78  E-value=1.7e-05  Score=61.19  Aligned_cols=170  Identities=12%  Similarity=-0.035  Sum_probs=96.2

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCC-----------CCcCCCcccchhhhhhhhhHH
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT-----------SSRLTPEGYDQMMSTNYIGAF   79 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~-----------~~~~~~~~~~~~~~~n~~~~~   79 (266)
                      ..+.++.+|+++.++..+++             ..+|++||+|+....           ..............+|+.++.
T Consensus        47 ~~~~~~~~d~~~~~~~~~~~-------------~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  113 (252)
T d2q46a1          47 GEADVFIGDITDADSINPAF-------------QGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQK  113 (252)
T ss_dssp             CCTTEEECCTTSHHHHHHHH-------------TTCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHH
T ss_pred             CCcEEEEeeecccccccccc-------------ccceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccce
Confidence            35778999999999887665             258999999987521           112233456777888899988


Q ss_pred             HHHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhH-HHHHHHHHHHHHhhCCCC
Q 024553           80 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSK-LCLLIFSYELHRNLGLDK  158 (266)
Q Consensus        80 ~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK-~~~~~~~~~la~~~~~~~  158 (266)
                      .++.......     .+.....++.....                    +......+..++ .........+..      
T Consensus       114 ~~~~~~~~~~-----~~~~~~~s~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~------  162 (252)
T d2q46a1         114 NQIDAAKVAG-----VKHIVVVGSMGGTN--------------------PDHPLNKLGNGNILVWKRKAEQYLA------  162 (252)
T ss_dssp             HHHHHHHHHT-----CSEEEEEEETTTTC--------------------TTCGGGGGGGCCHHHHHHHHHHHHH------
T ss_pred             eecccccccc-----ccccccccccccCC--------------------CCcccccccccchhhhhhhhhhhhh------
Confidence            8776664432     45677776654321                    111122222222 222222222222      


Q ss_pred             CCCeEEEEecCCcccCCccCcchhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecC
Q 024553          159 SRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGG  226 (266)
Q Consensus       159 ~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~  226 (266)
                      ..++.+..+.||++..+.............. .......+.+++++|++++.++..+ ...|+.|+..
T Consensus       163 ~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~-~~~~~~~~i~~~Dva~a~~~~l~~~-~~~g~~~~i~  228 (252)
T d2q46a1         163 DSGTPYTIIRAGGLLDKEGGVRELLVGKDDE-LLQTDTKTVPRADVAEVCIQALLFE-EAKNKAFDLG  228 (252)
T ss_dssp             HSSSCEEEEEECEEECSCTTSSCEEEESTTG-GGGSSCCEEEHHHHHHHHHHHTTCG-GGTTEEEEEE
T ss_pred             cccccceeecceEEECCCcchhhhhhccCcc-cccCCCCeEEHHHHHHHHHHHhCCc-cccCcEEEEe
Confidence            3578899999999976654322110000000 0000012457999999999766544 4567666543

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.75  E-value=3.7e-05  Score=59.65  Aligned_cols=156  Identities=11%  Similarity=0.018  Sum_probs=95.4

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      .+..+.+|+.+.+++...             ....|++||++|...     ......+...+|+.++..+++.+.    +
T Consensus        60 ~i~~~~~D~~~~~~~~~~-------------~~~~d~vi~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~a~----~  117 (232)
T d2bkaa1          60 NVNQEVVDFEKLDDYASA-------------FQGHDVGFCCLGTTR-----GKAGAEGFVRVDRDYVLKSAELAK----A  117 (232)
T ss_dssp             GCEEEECCGGGGGGGGGG-------------GSSCSEEEECCCCCH-----HHHHHHHHHHHHTHHHHHHHHHHH----H
T ss_pred             eeeeeeeccccccccccc-------------ccccccccccccccc-----cccchhhhhhhcccccceeeeccc----c
Confidence            567777888876655332             246899999998742     122345677889999888887763    3


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCc
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV  171 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~  171 (266)
                      .+ -.++|++|+..+.                      ......|..+|...+...+    ++.   -.  .+..+.||.
T Consensus       118 ~~-v~~fi~~Ss~~~~----------------------~~~~~~Y~~~K~~~E~~l~----~~~---~~--~~~IlRP~~  165 (232)
T d2bkaa1         118 GG-CKHFNLLSSKGAD----------------------KSSNFLYLQVKGEVEAKVE----ELK---FD--RYSVFRPGV  165 (232)
T ss_dssp             TT-CCEEEEECCTTCC----------------------TTCSSHHHHHHHHHHHHHH----TTC---CS--EEEEEECCE
T ss_pred             cC-ccccccCCccccc----------------------cCccchhHHHHHHhhhccc----ccc---cc--ceEEecCce
Confidence            33 5689999998752                      1223459999998886653    222   11  466789999


Q ss_pred             ccCCccCcchhHHHHHHHHHHHH------hhcCCCHHHHHHHHHHHhcCCCCcccceee
Q 024553          172 VKTNIMREVPSFLSLMAFTVLKL------LGLLQSPEKGINSVLDAALAPPETSGVYFF  224 (266)
Q Consensus       172 v~T~~~~~~~~~~~~~~~~~~~~------~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~  224 (266)
                      +..+....... ... .......      .....+.+++|+++++++..+. ..+.++.
T Consensus       166 i~G~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~~~~-~~~~~i~  221 (232)
T d2bkaa1         166 LLCDRQESRPG-EWL-VRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPR-DKQMELL  221 (232)
T ss_dssp             EECTTGGGSHH-HHH-HHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCC-CSSEEEE
T ss_pred             eecCCCcCcHH-HHH-HHHHhhccCCcccCCCeEEHHHHHHHHHHHHhcCc-cCCeEEE
Confidence            97765433211 111 1111111      1123467999999997765554 3444443

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.63  E-value=9.1e-07  Score=67.12  Aligned_cols=101  Identities=6%  Similarity=-0.048  Sum_probs=64.9

Q ss_pred             cEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhc
Q 024553           12 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN   91 (266)
Q Consensus        12 ~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~   91 (266)
                      .+.++.+|+++.+++++++             +.+|+||||||+.  ....+.+.|+..+.+|+.+.+..+..+.+.+..
T Consensus        72 ~~~~~~~d~~~~~~~~~~~-------------~~iDilin~Ag~g--~~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~  136 (191)
T d1luaa1          72 KVNVTAAETADDASRAEAV-------------KGAHFVFTAGAIG--LELLPQAAWQNESSIEIVADYNAQPPLGIGGID  136 (191)
T ss_dssp             TCCCEEEECCSHHHHHHHT-------------TTCSEEEECCCTT--CCCBCHHHHHTCTTCCEEEECCCSSSCSBTTCC
T ss_pred             chhhhhhhcccHHHHHHHh-------------cCcCeeeecCccc--cccCCHHHHHhhhcceeehhHhhHHHHHHHhhh
Confidence            3557889999998886654             4789999999974  345678889999999998887665544333322


Q ss_pred             CCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHH
Q 024553           92 SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSY  148 (266)
Q Consensus        92 ~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~  148 (266)
                      .  ......+++......                   ...+...|..+|.++..++.
T Consensus       137 ~--~~~~~~~~~~~~~g~-------------------~~~g~~~y~~sk~a~~~l~~  172 (191)
T d1luaa1         137 A--TDKGKEYGGKRAFGA-------------------LGIGGLKLKLHRACIAKLFE  172 (191)
T ss_dssp             T--TCEEEEETTEEEECH-------------------HHHHHHHHHHHHHHHHHHTS
T ss_pred             h--ccCcEEecceEEEec-------------------cCcCcHHHHHHHHHHHHHHh
Confidence            2  123333333322110                   01123468999998887663

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=97.22  E-value=0.00038  Score=55.16  Aligned_cols=105  Identities=12%  Similarity=-0.018  Sum_probs=69.5

Q ss_pred             EecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCCCC
Q 024553           17 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPS   96 (266)
Q Consensus        17 ~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~   96 (266)
                      .+|+++.+.++++++..           .+|+|||+||....  ..+.+.-+..+.+|+.++..+...+.    +.  +.
T Consensus        37 ~~Dl~~~~~~~~~i~~~-----------~~D~Vih~Aa~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~----~~--~~   97 (298)
T d1n2sa_          37 CGDFSNPKGVAETVRKL-----------RPDVIVNAAAHTAV--DKAESEPELAQLLNATSVEAIAKAAN----ET--GA   97 (298)
T ss_dssp             CCCTTCHHHHHHHHHHH-----------CCSEEEECCCCCCH--HHHTTCHHHHHHHHTHHHHHHHHHHT----TT--TC
T ss_pred             cCcCCCHHHHHHHHHHc-----------CCCEEEEecccccc--cccccCccccccccccccccchhhhh----cc--cc
Confidence            47899999888877644           58999999997632  12234456788999999988888763    22  45


Q ss_pred             eEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHH
Q 024553           97 RIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYE  149 (266)
Q Consensus        97 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~  149 (266)
                      +++++||...+....         .....+.....+...|+.+|...+.+.+.
T Consensus        98 ~~~~~ss~~~~~~~~---------~~~~~E~~~~~p~~~y~~~k~~~e~~~~~  141 (298)
T d1n2sa_          98 WVVHYSTDYVFPGTG---------DIPWQETDATSPLNVYGKTKLAGEKALQD  141 (298)
T ss_dssp             EEEEEEEGGGSCCCT---------TCCBCTTSCCCCSSHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccCCC---------CCCCccccccCCCchHhhhhhhhhhhHHh
Confidence            788888765432111         11122233444567799999988876643

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=96.93  E-value=0.0016  Score=50.94  Aligned_cols=170  Identities=16%  Similarity=0.069  Sum_probs=95.7

Q ss_pred             cCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCCCCeE
Q 024553           19 DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRI   98 (266)
Q Consensus        19 Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~i   98 (266)
                      |+++.++++++++..           .+|+|||+|+....  .......+..+..|+.....+...+...      ...+
T Consensus        37 D~~d~~~~~~~l~~~-----------~~d~vih~a~~~~~--~~~~~~~~~~~~~n~~~~~~~~~~~~~~------~~~~   97 (281)
T d1vl0a_          37 DITNVLAVNKFFNEK-----------KPNVVINCAAHTAV--DKCEEQYDLAYKINAIGPKNLAAAAYSV------GAEI   97 (281)
T ss_dssp             CTTCHHHHHHHHHHH-----------CCSEEEECCCCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHH------TCEE
T ss_pred             cCCCHHHHHHHHHHc-----------CCCEEEeecccccc--ccccccchhhcccccccccccccccccc------cccc
Confidence            678888887766533           57999999987532  1122334667777877777666655332      2466


Q ss_pred             EEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcccCCccC
Q 024553           99 VNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMR  178 (266)
Q Consensus        99 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~T~~~~  178 (266)
                      +..||...+.....         ....+.....+...|+.+|...+.+++    +.      +..+..+.|+++..+...
T Consensus        98 ~~~ss~~v~~~~~~---------~~~~e~~~~~~~~~~~~~k~~~e~~~~----~~------~~~~~i~R~~~vyG~~~~  158 (281)
T d1vl0a_          98 VQISTDYVFDGEAK---------EPITEFDEVNPQSAYGKTKLEGENFVK----AL------NPKYYIVRTAWLYGDGNN  158 (281)
T ss_dssp             EEEEEGGGSCSCCS---------SCBCTTSCCCCCSHHHHHHHHHHHHHH----HH------CSSEEEEEECSEESSSSC
T ss_pred             cccccceeeecccc---------ccccccccccchhhhhhhhhHHHHHHH----Hh------CCCccccceeEEeCCCcc
Confidence            66666554322110         011112344456678888888776653    22      345667889988766432


Q ss_pred             cchhHHHHHHHHHHH--------HhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          179 EVPSFLSLMAFTVLK--------LLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       179 ~~~~~~~~~~~~~~~--------~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      ....   +.......        ..+.+...+++++++..++...  ..|.|.. .+++.+.
T Consensus       159 ~~~~---~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~--~~g~~~~-~~~~~~s  214 (281)
T d1vl0a_         159 FVKT---MINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEK--NYGTFHC-TCKGICS  214 (281)
T ss_dssp             HHHH---HHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHT--CCEEEEC-CCBSCEE
T ss_pred             cccc---hhhhhccCCceeecCCceeccchhhhhhhhhhhhhhhc--ccCceeE-eCCCccc
Confidence            2111   11111000        0113458999999999766443  3466655 4555554

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.70  E-value=0.0009  Score=50.54  Aligned_cols=136  Identities=12%  Similarity=0.005  Sum_probs=81.3

Q ss_pred             CCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccC
Q 024553           43 HSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGK  122 (266)
Q Consensus        43 ~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  122 (266)
                      ...+|++|+++|....    ....-+...++|+.++..+++.+    ++.+ -.+++++||..+.               
T Consensus        60 ~~~~d~vi~~~g~~~~----~~~~~~~~~~~~~~~~~~~~~~a----~~~~-v~~~i~~Ss~~~~---------------  115 (212)
T d2a35a1          60 DGSIDTAFCCLGTTIK----EAGSEEAFRAVDFDLPLAVGKRA----LEMG-ARHYLVVSALGAD---------------  115 (212)
T ss_dssp             CSCCSEEEECCCCCHH----HHSSHHHHHHHHTHHHHHHHHHH----HHTT-CCEEEEECCTTCC---------------
T ss_pred             ccchheeeeeeeeecc----ccccccccccchhhhhhhccccc----cccc-ccccccccccccc---------------
Confidence            3578999999987521    11223678889999998888876    3333 5689999997652               


Q ss_pred             cccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcccCCccCcchhHH--H---HHHHHHHHHhhc
Q 024553          123 FFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL--S---LMAFTVLKLLGL  197 (266)
Q Consensus       123 ~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~T~~~~~~~~~~--~---~~~~~~~~~~~~  197 (266)
                             ......|..+|...+...+    +..     --++..+.|+.|..+.........  .   ........    
T Consensus       116 -------~~~~~~y~~~K~~~E~~l~----~~~-----~~~~~I~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~----  175 (212)
T d2a35a1         116 -------AKSSIFYNRVKGELEQALQ----EQG-----WPQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYH----  175 (212)
T ss_dssp             -------TTCSSHHHHHHHHHHHHHT----TSC-----CSEEEEEECCSEESTTSCEEGGGGTTCCCC----CHHH----
T ss_pred             -------cccccchhHHHHHHhhhcc----ccc-----cccceeeCCcceeCCcccccHHHHHHHHHhhccCCCCc----
Confidence                   2233568999988776552    221     115677889998765432211000  0   00000011    


Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccceee
Q 024553          198 LQSPEKGINSVLDAALAPPETSGVYFF  224 (266)
Q Consensus       198 ~~~p~~~a~~~~~~~~~~~~~~G~~~~  224 (266)
                      +...+++|++++.++..+  ..|..+.
T Consensus       176 ~i~v~DvA~ai~~~~~~~--~~g~~~~  200 (212)
T d2a35a1         176 GIEACDLARALWRLALEE--GKGVRFV  200 (212)
T ss_dssp             HHHHHHHHHHHHHHHTCC--CSEEEEE
T ss_pred             EEEHHHHHHHHHHHHcCC--CCCCEEE
Confidence            137899999999765443  3455443

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=96.19  E-value=0.0016  Score=51.64  Aligned_cols=166  Identities=7%  Similarity=0.028  Sum_probs=84.1

Q ss_pred             ccEEEEEecCCCHHHHHHHHHHHHHhhccCCCCCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHh
Q 024553           11 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLK   90 (266)
Q Consensus        11 ~~~~~i~~Dls~~~~v~~~~~~i~~~~~~~~~~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   90 (266)
                      ..+.++.+|+++.+.+.+.+             ...+.++++++....             ..|..+...++..+    .
T Consensus        54 ~~v~~v~~d~~d~~~~~~~~-------------~~~~~~~~~~~~~~~-------------~~~~~~~~~~l~~a----~  103 (312)
T d1qyda_          54 LGAKLIEASLDDHQRLVDAL-------------KQVDVVISALAGGVL-------------SHHILEQLKLVEAI----K  103 (312)
T ss_dssp             TTCEEECCCSSCHHHHHHHH-------------TTCSEEEECCCCSSS-------------STTTTTHHHHHHHH----H
T ss_pred             CCcEEEEeecccchhhhhhc-------------cCcchhhhhhhhccc-------------ccchhhhhHHHHHH----H
Confidence            35889999999998887655             246778887765321             22344444444443    3


Q ss_pred             cCCCCCeEEEEcCCcccccccccCCccccccCcccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCC
Q 024553           91 NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  170 (266)
Q Consensus        91 ~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG  170 (266)
                      +.. ..++++.||.......               ...+......|..+|.....    +..+      .++.+..+.||
T Consensus       104 ~~~-~~~~v~~Ss~g~~~~~---------------~~~~~~~~~~~~~~~~~~~~----~~~~------~~~~~~i~r~~  157 (312)
T d1qyda_         104 EAG-NIKRFLPSEFGMDPDI---------------MEHALQPGSITFIDKRKVRR----AIEA------ASIPYTYVSSN  157 (312)
T ss_dssp             HSC-CCSEEECSCCSSCTTS---------------CCCCCSSTTHHHHHHHHHHH----HHHH------TTCCBCEEECC
T ss_pred             Hhc-CCcEEEEeeccccCCC---------------cccccchhhhhhHHHHHHHH----hhcc------cccceEEeccc
Confidence            333 4567777765432100               01122222334444444443    3333      35556667777


Q ss_pred             cccCCccCcchhH--------HHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          171 VVKTNIMREVPSF--------LSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       171 ~v~T~~~~~~~~~--------~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      .+..+........        ..............+.+++|+|++++.++..++..++.++....++.+.
T Consensus       158 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~~s  227 (312)
T d1qyda_         158 MFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILS  227 (312)
T ss_dssp             EEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEE
T ss_pred             eeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCccccCceEEEeCCCcCCC
Confidence            7643322111000        0000000000011246899999999987766655556666644445443

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=95.48  E-value=0.023  Score=44.38  Aligned_cols=162  Identities=13%  Similarity=0.042  Sum_probs=89.0

Q ss_pred             CCCcceeeEcCCCCCCCCcCCCcccchhhhhhhhhHHHHHHhhHHHHhcCCCCCeEEEEcCCcccccccccCCccccccC
Q 024553           43 HSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGK  122 (266)
Q Consensus        43 ~~~ld~lv~nAG~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  122 (266)
                      ...+++++|.|+....    .....+.....|+.++..++..+...      ..++++.||..............     
T Consensus        66 ~~~~~~i~~~aa~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~------~i~~v~~ss~~~~~~~~~~~~~~-----  130 (307)
T d1eq2a_          66 FGDVEAIFHEGACSST----TEWDGKYMMDNNYQYSKELLHYCLER------EIPFLYASSAATYGGRTSDFIES-----  130 (307)
T ss_dssp             CSSCCEEEECCSCCCT----TCCCHHHHHHHTHHHHHHHHHHHHHH------TCCEEEEEEGGGGTTCCSCBCSS-----
T ss_pred             ccchhhhhhhcccccc----cccccccccccccccccccccccccc------ccccccccccccccccccccccc-----
Confidence            4567888888876432    12234667788888888777765433      22455555554433221111111     


Q ss_pred             cccCCCCCChhhcchHhHHHHHHHHHHHHHhhCCCCCCCeEEEEecCCcccCCccCcc------hhHH-HHHHHH-----
Q 024553          123 FFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV------PSFL-SLMAFT-----  190 (266)
Q Consensus       123 ~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~~~~i~v~~v~PG~v~T~~~~~~------~~~~-~~~~~~-----  190 (266)
                          .....+...|+.+|.+.+.+++.++.+.      ++.+..+.|..+..+.....      .... ......     
T Consensus       131 ----~~~~~~~~~Y~~~K~~~e~~~~~~~~~~------~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (307)
T d1eq2a_         131 ----REYEKPLNVYGYSKFLFDEYVRQILPEA------NSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKL  200 (307)
T ss_dssp             ----GGGCCCSSHHHHHHHHHHHHHHHHGGGC------SSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC------
T ss_pred             ----ccccccccccccccchhhhhcccccccc------ccccccccceeEeeccccccccccccccccccccccccceee
Confidence                1123445679999999999998887764      55677777777766543211      1110 000000     


Q ss_pred             ---HHHHhhcCCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          191 ---VLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       191 ---~~~~~~~~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                         .....+.+...++++.++..++...  ..+.|.. +.|+...
T Consensus       201 ~~g~~~~~r~~~~v~d~~~~~~~~~~~~--~~~~~~~-~~~~~~s  242 (307)
T d1eq2a_         201 FEGSENFKRDFVYVGDVADVNLWFLENG--VSGIFNL-GTGRAES  242 (307)
T ss_dssp             -------CBCEEEHHHHHHHHHHHHHHC--CCEEEEE-SCSCCBC
T ss_pred             ecCccceeeeeeecccHHHHHHHHhhhc--ccccccc-ccccchh
Confidence               0011123457889999998555432  3344544 5565554

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=91.72  E-value=0.11  Score=40.07  Aligned_cols=35  Identities=11%  Similarity=0.065  Sum_probs=23.9

Q ss_pred             CCCHHHHHHHHHHHhcCCCCcccceeecCCCcccc
Q 024553          198 LQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  232 (266)
Q Consensus       198 ~~~p~~~a~~~~~~~~~~~~~~G~~~~~~~g~~~~  232 (266)
                      +...+|+|++++.++..++..++.++....++.+.
T Consensus       188 ~i~v~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s  222 (307)
T d1qyca_         188 FVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLS  222 (307)
T ss_dssp             EECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEE
T ss_pred             CCcHHHHHHHHHHHhcChhhcCceeEEeCCCCccC
Confidence            56899999999976655555555566545555553