Citrus Sinensis ID: 024628

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-----
MSMLLVLCFATHTAEARRDRDPLISNLVSKELFAAIFLHKDDNACPAKGFYTYDSFIQATSCFPRFGNVGSLATRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFKEEVTPQSDYCDSSNRKWPCYPGKSYKGRGPIQLSWNYNYGPAGKALGFDGLRNPEIVANNSLIAFKTALWFWMTEQKPKPSCHNVMIGKYVPTKADLAANRTVGFGLVTNIINGGLECGIPNDGRVNDRIGYFRRYAKLLNVDTGNNLDCENQKSF
ccHHHHHHHHcccccccccccccccccccHHHHHHHHcccccccccccccccHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccHHHccHHHHHHHHHHHHHccccccccccEEEcccccccHHHHHccccccccHHHHHHHccccccccccccHHHHHHHHHHHHHHccccccccccccccccc
MSMLLVLCFATHTAEARRDRDPLISNLVSKELFAAIFLHKDDNACPAKGFYTYDSFIQATSCFPRFGNVGSLATRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFKEEVTPQSDYCDSSNRKWPCYPGKSYKGRGPIQLSWNYNYGPAGKALGFDGLRNPEIVANNSLIAFKTALWFWMTEQKPKPSCHNVMIGKYVPTKADLAANRTVGFGLVTNIINGGLECGIPNDGRVNDRIGYFRRYAKLLNVDTGNNLDCENQKS*
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SSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MSMLLVLCFATHTAEARRDRDPLISNLVSKELFAAIFLHKDDNACPAKGFYTYDSFIQATSCFPRFGNVGSLATRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFKEEVTPQSDYCDSSNRKWPCYPGKSYKGRGPIQLSWNYNYGPAGKALGFDGLRNPEIVANNSLIAFKTALWFWMTEQKPKPSCHNVMIGKYVPTKADLAANRTVGFGLVTNIINGGLECGIPNDGRVNDRIGYFRRYAKLLNVDTGNNLDCENQKSF

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Chitinase 10 confidentQ5NB11
Basic endochitinase (Fragment) Defense against chitin containing fungal pathogens.probableQ05537
26 kDa endochitinase 2 Defense against chitin containing fungal pathogens.probableP23951

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
3.-.-.-Hydrolases.probable
3.2.-.-Glycosylases.probable
3.2.1.-Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds.probable
3.2.1.14Chitinase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3CQL, chain A
Confidence level:very confident
Coverage over the Query: 23-265
View the alignment between query and template
View the model in PyMOL