Citrus Sinensis ID: 024718

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260---
MAGCPGVPVAEGSPEPLKGGKPRVAEFAHGSDGMGNISLTPPKAKKCDKNASEFLVDKVSEYPGEVSILALGPLTNLALAIKRDSSFASKVKNIVVLGGAFFALGNVNPAAEANIYGDPEAADVVFTSGANIAVVGINITTQVKLTDADFLELRQSKGRYVQLLGDMCKFYRDWHVKSDGVHGIFLHDPVSFVALVRPDLFTFKKGVVRVETQGICMGHTLMDQGLKRWNVSNPWTGYSPVSVAWTVNVDKVLNYIKRLLMKQ
ccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHccccccccccEEEEcccccccccccHHHHccccccHHHHHHHHHccccEEEEcccccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHccccEEEEEEEEEEEEcccccccEEEEccccccccccccccccccEEEEcccHHHHHHHHHHHHHcc
ccccccccEcccccccccccccEEHHHHcccccccccccccccccccccHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHHccHHHHHHHEEEEEccHHcccccccccEEEEEEEcHHHHHHHHHccccEEEEEcccccEEEccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEccHHcccEEEEEEEEEccccccEEEEEccccccccccccccccccEEEEEccHHHHHHHHHHHHHcc
magcpgvpvaegspeplkggkprvaefahgsdgmgnisltppkakkcdknaSEFLVDKvseypgevsilalgpltNLALAIKRDSSFASKVKNIVVLGGAFfalgnvnpaaeaniygdpeaadvvFTSGANIAVVGINITTQVKLTDADFLELRQSKGRYVQLLGDMCKFyrdwhvksdgvhgiflhdpvsfvalvrpdlftfkkGVVRVETQGICMGHTLMDqglkrwnvsnpwtgyspvsvAWTVNVDKVLNYIKRLLMKQ
magcpgvpvaegspeplkgGKPRVAEFAHGSDGMGNISLTPPKAKKCDKNASEFLVDKVSEYPGEVSILALGPLTNLALAIKRDSSFASKVKNIVVLGGAFFALGNVNPAAEANIYGDPEAADVVFTSGANIAVVGINITTQVKLTDADFLELRQSKGRYVQLLGDMCKFYRDWHVKSDGVHGIFLHDPVSFVALVRPDLFTFKKGVVRVETQGICMGHTLMDQGLKRWNVSNPWTGYSpvsvawtvnvDKVLNYIKRLLMKQ
MAGCPGVPVAEGSPEPLKGGKPRVAEFAHGSDGMGNISLTPPKAKKCDKNASEFLVDKVSEYPGEVSILALGPLTNLALAIKRDSSFASKVKNIVVLGGAFFALGNVNPAAEANIYGDPEAADVVFTSGANIAVVGINITTQVKLTDADFLELRQSKGRYVQLLGDMCKFYRDWHVKSDGVHGIFLHDPVSFVALVRPDLFTFKKGVVRVETQGICMGHTLMDQGLKRWNVSNPWTGYSPVSVAWTVNVDKVLNYIKRLLMKQ
****************************************************EFLVDKVSEYPGEVSILALGPLTNLALAIKRDSSFASKVKNIVVLGGAFFALGNVNPAAEANIYGDPEAADVVFTSGANIAVVGINITTQVKLTDADFLELRQSKGRYVQLLGDMCKFYRDWHVKSDGVHGIFLHDPVSFVALVRPDLFTFKKGVVRVETQGICMGHTLMDQGLKRWNVSNPWTGYSPVSVAWTVNVDKVLNYIKRLL***
MAGCPGVPVAEGSPEPLKGGKPRVAEFAHGSDGMGNISLTPPKAKKCDKNASEFLVDKVSEYPGEVSILALGPLTNLALAIKRDSSFASKVKNIVVLGGAFFALGNVNPAAEANIYGDPEAADVVFTSGANIAVVGINITTQVKLTDADFLELRQSKGRYVQLLGDMCKFYRDWHVKSDGVHGIFLHDPVSFVALVRPDLFTFKKGVVRVETQGICMGHTLMDQGLKRWNVSNPWTGYSPVSVAWTVNVDKVLNYIKRLLMK*
MAGCPGVPVAEGSPEPLKGGKPRVAEFAHGSDGMGNISLTPPKAKKCDKNASEFLVDKVSEYPGEVSILALGPLTNLALAIKRDSSFASKVKNIVVLGGAFFALGNVNPAAEANIYGDPEAADVVFTSGANIAVVGINITTQVKLTDADFLELRQSKGRYVQLLGDMCKFYRDWHVKSDGVHGIFLHDPVSFVALVRPDLFTFKKGVVRVETQGICMGHTLMDQGLKRWNVSNPWTGYSPVSVAWTVNVDKVLNYIKRLLMKQ
****PGVPVAEGSPEPLKGGKPRVAEFAHGSDGMGNISLTPPKAKKCDKNASEFLVDKVSEYPGEVSILALGPLTNLALAIKRDSSFASKVKNIVVLGGAFFALGNVNPAAEANIYGDPEAADVVFTSGANIAVVGINITTQVKLTDADFLELRQSKGRYVQLLGDMCKFYRDWHVKSDGVHGIFLHDPVSFVALVRPDLFTFKKGVVRVETQGICMGHTLMDQGLKRWNVSNPWTGYSPVSVAWTVNVDKVLNYIKRLLMKQ
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAGCPGVPVAEGSPEPLKGGKPRVAEFAHGSDGMGNISLTPPKAKKCDKNASEFLVDKVSEYPGEVSILALGPLTNLALAIKRDSSFASKVKNIVVLGGAFFALGNVNPAAEANIYGDPEAADVVFTSGANIAVVGINITTQVKLTDADFLELRQSKGRYVQLLGDMCKFYRDWHVKSDGVHGIFLHDPVSFVALVRPDLFTFKKGVVRVETQGICMGHTLMDQGLKRWNVSNPWTGYSPVSVAWTVNVDKVLNYIKRLLMKQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query263 2.2.26 [Sep-21-2011]
Q9SJM7336 Uridine nucleosidase 1 OS yes no 0.996 0.779 0.782 1e-121
Q6ZJ05324 Probable uridine nucleosi yes no 0.988 0.802 0.765 1e-118
Q652Q8337 Probable uridine nucleosi no no 0.988 0.771 0.731 1e-110
Q8LAC4322 Probable uridine nucleosi no no 1.0 0.816 0.477 1e-64
Q9P6J4310 Uncharacterized protein C yes no 0.912 0.774 0.337 2e-33
A0L0Y0318 Pyrimidine-specific ribon yes no 0.821 0.679 0.336 2e-28
A3D0C6318 Pyrimidine-specific ribon yes no 0.821 0.679 0.336 2e-28
A6WSI3318 Pyrimidine-specific ribon yes no 0.821 0.679 0.336 2e-28
B4TB65311 Pyrimidine-specific ribon yes no 0.825 0.697 0.343 2e-28
B5BCD9311 Pyrimidine-specific ribon yes no 0.825 0.697 0.343 2e-28
>sp|Q9SJM7|URH1_ARATH Uridine nucleosidase 1 OS=Arabidopsis thaliana GN=URH1 PE=1 SV=2 Back     alignment and function desciption
 Score =  433 bits (1113), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 205/262 (78%), Positives = 235/262 (89%)

Query: 1   MAGCPGVPVAEGSPEPLKGGKPRVAEFAHGSDGMGNISLTPPKAKKCDKNASEFLVDKVS 60
           +AG P VPVAEGS EPLKGG PRVA+F HG +G+G++SL PP  KK +K+A+EFL +KV 
Sbjct: 74  IAGFPDVPVAEGSSEPLKGGIPRVADFVHGKNGLGDVSLPPPSRKKSEKSAAEFLDEKVE 133

Query: 61  EYPGEVSILALGPLTNLALAIKRDSSFASKVKNIVVLGGAFFALGNVNPAAEANIYGDPE 120
           EYPGEV+ILALGPLTNLALAIKRDSSFASKVK IV+LGGAFF+LGNVNPAAEANIYGDPE
Sbjct: 134 EYPGEVTILALGPLTNLALAIKRDSSFASKVKKIVILGGAFFSLGNVNPAAEANIYGDPE 193

Query: 121 AADVVFTSGANIAVVGINITTQVKLTDADFLELRQSKGRYVQLLGDMCKFYRDWHVKSDG 180
           AADVVFTSGA+I VVGINITTQ+KL+D D LEL   KG++ +L+ DMCKFYRDWHVKSDG
Sbjct: 194 AADVVFTSGADITVVGINITTQLKLSDDDLLELGNCKGKHSKLISDMCKFYRDWHVKSDG 253

Query: 181 VHGIFLHDPVSFVALVRPDLFTFKKGVVRVETQGICMGHTLMDQGLKRWNVSNPWTGYSP 240
           V+G++LHDPVSFVA+VRPDLFT+KKGVVRVETQGIC+GHTLMDQGLKRWN SNPW GYSP
Sbjct: 254 VYGVYLHDPVSFVAVVRPDLFTYKKGVVRVETQGICVGHTLMDQGLKRWNGSNPWVGYSP 313

Query: 241 VSVAWTVNVDKVLNYIKRLLMK 262
           +SVAWTV+V+ VL Y+K  LMK
Sbjct: 314 ISVAWTVDVEGVLEYVKAKLMK 335
Involved in pyrimidine breakdown rather than in pyrimidine salvage. Unable to use cytidine as a substrate.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 2EC: .EC: 3
>sp|Q6ZJ05|URH1_ORYSJ Probable uridine nucleosidase 1 OS=Oryza sativa subsp. japonica GN=URH1 PE=2 SV=1 Back     alignment and function description
>sp|Q652Q8|URH2_ORYSJ Probable uridine nucleosidase 2 OS=Oryza sativa subsp. japonica GN=URH2 PE=2 SV=1 Back     alignment and function description
>sp|Q8LAC4|URH2_ARATH Probable uridine nucleosidase 2 OS=Arabidopsis thaliana GN=URH2 PE=2 SV=1 Back     alignment and function description
>sp|Q9P6J4|YHD6_SCHPO Uncharacterized protein C1683.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.06c PE=3 SV=1 Back     alignment and function description
>sp|A0L0Y0|RIHA_SHESA Pyrimidine-specific ribonucleoside hydrolase RihA OS=Shewanella sp. (strain ANA-3) GN=rihA PE=3 SV=1 Back     alignment and function description
>sp|A3D0C6|RIHA_SHEB5 Pyrimidine-specific ribonucleoside hydrolase RihA OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=rihA PE=3 SV=1 Back     alignment and function description
>sp|A6WSI3|RIHA_SHEB8 Pyrimidine-specific ribonucleoside hydrolase RihA OS=Shewanella baltica (strain OS185) GN=rihA PE=3 SV=1 Back     alignment and function description
>sp|B4TB65|RIHA_SALHS Pyrimidine-specific ribonucleoside hydrolase RihA OS=Salmonella heidelberg (strain SL476) GN=rihA PE=3 SV=1 Back     alignment and function description
>sp|B5BCD9|RIHA_SALPK Pyrimidine-specific ribonucleoside hydrolase RihA OS=Salmonella paratyphi A (strain AKU_12601) GN=rihA PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query263
224090661351 predicted protein [Populus trichocarpa] 0.996 0.746 0.843 1e-128
359482324342 PREDICTED: uridine nucleosidase 1-like [ 0.996 0.766 0.843 1e-127
255575629330 inosine-uridine preferring nucleoside hy 0.996 0.793 0.812 1e-126
357510999334 Inosine-uridine preferring ribonucleosid 0.996 0.784 0.816 1e-124
363806952330 uncharacterized protein LOC100787563 [Gl 0.996 0.793 0.782 1e-121
297827113332 inosine-uridine preferring nucleoside hy 0.996 0.789 0.790 1e-121
449451126332 PREDICTED: uridine nucleosidase 1-like [ 0.996 0.789 0.793 1e-119
18404099336 Uridine nucleosidase 1 [Arabidopsis thal 0.996 0.779 0.782 1e-119
326514768324 predicted protein [Hordeum vulgare subsp 0.988 0.802 0.773 1e-117
195629752325 pyrimidine-specific ribonucleoside hydro 0.988 0.8 0.769 1e-117
>gi|224090661|ref|XP_002309047.1| predicted protein [Populus trichocarpa] gi|222855023|gb|EEE92570.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 221/262 (84%), Positives = 241/262 (91%)

Query: 1   MAGCPGVPVAEGSPEPLKGGKPRVAEFAHGSDGMGNISLTPPKAKKCDKNASEFLVDKVS 60
           +AG P VPVAEGSPEPLKGG P V +F HGSDG+GN  L+PPKAKK  K+ASEFL+DKVS
Sbjct: 90  IAGRPDVPVAEGSPEPLKGGIPTVPDFIHGSDGLGNTFLSPPKAKKIGKSASEFLLDKVS 149

Query: 61  EYPGEVSILALGPLTNLALAIKRDSSFASKVKNIVVLGGAFFALGNVNPAAEANIYGDPE 120
           EYPGEVSILALGPLTNLALAIKRDSSFASKVK IVVLGGAFFALGNVNPAAEANI+GDPE
Sbjct: 150 EYPGEVSILALGPLTNLALAIKRDSSFASKVKRIVVLGGAFFALGNVNPAAEANIHGDPE 209

Query: 121 AADVVFTSGANIAVVGINITTQVKLTDADFLELRQSKGRYVQLLGDMCKFYRDWHVKSDG 180
           AAD+VFTSGANI VVGINITTQVK TD D LELRQSKG+Y ++L DMCKFYRDWHVKSDG
Sbjct: 210 AADLVFTSGANIVVVGINITTQVKFTDGDLLELRQSKGKYAKILSDMCKFYRDWHVKSDG 269

Query: 181 VHGIFLHDPVSFVALVRPDLFTFKKGVVRVETQGICMGHTLMDQGLKRWNVSNPWTGYSP 240
           V+GIFLHDPVSFVALVRPDLFT+K GVVRVETQGIC GHTLMDQGLKRWN SNPW+G+SP
Sbjct: 270 VYGIFLHDPVSFVALVRPDLFTYKNGVVRVETQGICAGHTLMDQGLKRWNSSNPWSGFSP 329

Query: 241 VSVAWTVNVDKVLNYIKRLLMK 262
           V+VAWTV VD+VLNY+++LLMK
Sbjct: 330 VAVAWTVTVDEVLNYVRQLLMK 351

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359482324|ref|XP_002283153.2| PREDICTED: uridine nucleosidase 1-like [Vitis vinifera] gi|297740083|emb|CBI30265.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255575629|ref|XP_002528714.1| inosine-uridine preferring nucleoside hydrolase, putative [Ricinus communis] gi|223531808|gb|EEF33626.1| inosine-uridine preferring nucleoside hydrolase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|357510999|ref|XP_003625788.1| Inosine-uridine preferring ribonucleoside hydrolase [Medicago truncatula] gi|355500803|gb|AES82006.1| Inosine-uridine preferring ribonucleoside hydrolase [Medicago truncatula] Back     alignment and taxonomy information
>gi|363806952|ref|NP_001242310.1| uncharacterized protein LOC100787563 [Glycine max] gi|255642155|gb|ACU21342.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|297827113|ref|XP_002881439.1| inosine-uridine preferring nucleoside hydrolase family protein [Arabidopsis lyrata subsp. lyrata] gi|297327278|gb|EFH57698.1| inosine-uridine preferring nucleoside hydrolase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|449451126|ref|XP_004143313.1| PREDICTED: uridine nucleosidase 1-like [Cucumis sativus] gi|449482364|ref|XP_004156258.1| PREDICTED: uridine nucleosidase 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|18404099|ref|NP_565843.1| Uridine nucleosidase 1 [Arabidopsis thaliana] gi|75206298|sp|Q9SJM7.2|URH1_ARATH RecName: Full=Uridine nucleosidase 1; AltName: Full=Uridine ribohydrolase 1 gi|15809830|gb|AAL06843.1| At2g36310/F2H17.8 [Arabidopsis thaliana] gi|17978871|gb|AAL47407.1| At2g36310/F2H17.8 [Arabidopsis thaliana] gi|20197937|gb|AAD21435.2| expressed protein [Arabidopsis thaliana] gi|21554564|gb|AAM63615.1| unknown [Arabidopsis thaliana] gi|330254137|gb|AEC09231.1| Uridine nucleosidase 1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|326514768|dbj|BAJ99745.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326526085|dbj|BAJ93219.1| predicted protein [Hordeum vulgare subsp. vulgare] Back     alignment and taxonomy information
>gi|195629752|gb|ACG36517.1| pyrimidine-specific ribonucleoside hydrolase rihA [Zea mays] gi|380450563|gb|AFD54993.1| nucleoside N-ribohydrolase 2b [Zea mays subsp. mays] gi|414870116|tpg|DAA48673.1| TPA: putative inosine-uridine preferring nucleoside hydrolase [Zea mays] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query263
TAIR|locus:2049435336 URH1 "uridine-ribohydrolase 1" 0.996 0.779 0.782 1.2e-111
TAIR|locus:2032008322 URH2 "uridine-ribohydrolase 2" 0.996 0.813 0.479 1.5e-60
POMBASE|SPBC1683.06c310 SPBC1683.06c "uridine ribohydr 0.912 0.774 0.337 5.2e-33
TIGR_CMR|SPO_2470313 SPO_2470 "inosine-uridine pref 0.832 0.699 0.381 1.4e-30
TIGR_CMR|SO_0811318 SO_0811 "inosine-uridine prefe 0.821 0.679 0.331 5e-28
UNIPROTKB|P41409311 rihA [Escherichia coli K-12 (t 0.817 0.691 0.342 1e-27
UNIPROTKB|P33022313 rihB "ribonucleoside hydrolase 0.821 0.690 0.305 5.7e-27
UNIPROTKB|P22564304 rihC [Escherichia coli K-12 (t 0.798 0.690 0.357 7.3e-27
TIGR_CMR|BA_2888321 BA_2888 "inosine-uridine prefe 0.809 0.663 0.301 5.3e-24
TIGR_CMR|BA_3606310 BA_3606 "inosine-uridine prefe 0.882 0.748 0.296 1e-22
TAIR|locus:2049435 URH1 "uridine-ribohydrolase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1102 (393.0 bits), Expect = 1.2e-111, P = 1.2e-111
 Identities = 205/262 (78%), Positives = 235/262 (89%)

Query:     1 MAGCPGVPVAEGSPEPLKGGKPRVAEFAHGSDGMGNISLTPPKAKKCDKNASEFLVDKVS 60
             +AG P VPVAEGS EPLKGG PRVA+F HG +G+G++SL PP  KK +K+A+EFL +KV 
Sbjct:    74 IAGFPDVPVAEGSSEPLKGGIPRVADFVHGKNGLGDVSLPPPSRKKSEKSAAEFLDEKVE 133

Query:    61 EYPGEVSILALGPLTNLALAIKRDSSFASKVKNIVVLGGAFFALGNVNPAAEANIYGDPE 120
             EYPGEV+ILALGPLTNLALAIKRDSSFASKVK IV+LGGAFF+LGNVNPAAEANIYGDPE
Sbjct:   134 EYPGEVTILALGPLTNLALAIKRDSSFASKVKKIVILGGAFFSLGNVNPAAEANIYGDPE 193

Query:   121 AADVVFTSGANIAVVGINITTQVKLTDADFLELRQSKGRYVQLLGDMCKFYRDWHVKSDG 180
             AADVVFTSGA+I VVGINITTQ+KL+D D LEL   KG++ +L+ DMCKFYRDWHVKSDG
Sbjct:   194 AADVVFTSGADITVVGINITTQLKLSDDDLLELGNCKGKHSKLISDMCKFYRDWHVKSDG 253

Query:   181 VHGIFLHDPVSFVALVRPDLFTFKKGVVRVETQGICMGHTLMDQGLKRWNVSNPWTGYSP 240
             V+G++LHDPVSFVA+VRPDLFT+KKGVVRVETQGIC+GHTLMDQGLKRWN SNPW GYSP
Sbjct:   254 VYGVYLHDPVSFVAVVRPDLFTYKKGVVRVETQGICVGHTLMDQGLKRWNGSNPWVGYSP 313

Query:   241 VSVAWTVNVDKVLNYIKRLLMK 262
             +SVAWTV+V+ VL Y+K  LMK
Sbjct:   314 ISVAWTVDVEGVLEYVKAKLMK 335
GO:0005737 "cytoplasm" evidence=ISM
GO:0016787 "hydrolase activity" evidence=ISS
GO:0005829 "cytosol" evidence=IDA
GO:0006218 "uridine catabolic process" evidence=IMP
GO:0045437 "uridine nucleosidase activity" evidence=IDA
GO:0047622 "adenosine nucleosidase activity" evidence=IDA
GO:0047724 "inosine nucleosidase activity" evidence=IDA
GO:0006152 "purine nucleoside catabolic process" evidence=IMP
GO:0072585 "xanthosine nucleotidase activity" evidence=IDA
TAIR|locus:2032008 URH2 "uridine-ribohydrolase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
POMBASE|SPBC1683.06c SPBC1683.06c "uridine ribohydrolase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_2470 SPO_2470 "inosine-uridine preferring nucleoside hydrolase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TIGR_CMR|SO_0811 SO_0811 "inosine-uridine preferring nucleoside hydrolase family protein" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
UNIPROTKB|P41409 rihA [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
UNIPROTKB|P33022 rihB "ribonucleoside hydrolase 2 (pyrimidine-specific)" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
UNIPROTKB|P22564 rihC [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TIGR_CMR|BA_2888 BA_2888 "inosine-uridine preferring nucleoside hydrolase family protein" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
TIGR_CMR|BA_3606 BA_3606 "inosine-uridine preferring nucleoside hydrolase family protein" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q6ZJ05URH1_ORYSJ3, ., 2, ., 2, ., 30.76530.98850.8024yesno
Q9SJM7URH1_ARATH3, ., 2, ., 2, ., 30.78240.99610.7797yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.2.30.991
3rd Layer3.2.20.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query263
PLN02717316 PLN02717, PLN02717, uridine nucleosidase 1e-175
cd02650304 cd02650, nuc_hydro_CaPnhB, NH_hydro_CaPnhB: A subg 1e-121
COG1957311 COG1957, URH1, Inosine-uridine nucleoside N-ribohy 3e-78
pfam01156304 pfam01156, IU_nuc_hydro, Inosine-uridine preferrin 5e-74
cd02651302 cd02651, nuc_hydro_IU_UC_XIUA, nuc_hydro_IU_UC_XIU 2e-60
cd00455295 cd00455, nuc_hydro, nuc_hydro: Nucleoside hydrolas 3e-57
cd02653320 cd02653, nuc_hydro_3, NH_3: A subgroup of nucleosi 2e-41
cd02649306 cd02649, nuc_hydro_CeIAG, nuc_hydro_CeIAG: Nucleos 2e-40
PRK10443311 PRK10443, rihA, ribonucleoside hydrolase 1; Provis 4e-39
PRK10768304 PRK10768, PRK10768, ribonucleoside hydrolase RihC; 9e-37
PRK09955313 PRK09955, rihB, ribonucleoside hydrolase 2; Provis 6e-35
cd02647312 cd02647, nuc_hydro_TvIAG, nuc_hydro_ TvIAG: Nucleo 2e-24
cd02654318 cd02654, nuc_hydro_CjNH, nuc_hydro_CjNH 4e-23
cd02648367 cd02648, nuc_hydro_1, NH_1: A subgroup of nucleosi 6e-23
PTZ00313326 PTZ00313, PTZ00313, inosine-adenosine-guanosine-nu 3e-08
cd02652293 cd02652, nuc_hydro_2, NH_2: A subgroup of nucleosi 8e-05
>gnl|CDD|178319 PLN02717, PLN02717, uridine nucleosidase Back     alignment and domain information 
 Score =  484 bits (1247), Expect = e-175
 Identities = 186/264 (70%), Positives = 213/264 (80%), Gaps = 1/264 (0%)

Query: 1   MAGCPGVPVAEGSPEPLKGG-KPRVAEFAHGSDGMGNISLTPPKAKKCDKNASEFLVDKV 59
           MAG P VPVAEGS EPLKGG KPR+A+F HGSDG+GN +L PPK KK +K+A+EFLV+KV
Sbjct: 53  MAGRPDVPVAEGSHEPLKGGTKPRIADFVHGSDGLGNTNLPPPKGKKIEKSAAEFLVEKV 112

Query: 60  SEYPGEVSILALGPLTNLALAIKRDSSFASKVKNIVVLGGAFFALGNVNPAAEANIYGDP 119
           SEYPGEV+++ALGPLTNLALAIK D SFA KV  IVVLGGAFF  GNVNPAAEANI+GDP
Sbjct: 113 SEYPGEVTVVALGPLTNLALAIKLDPSFAKKVGQIVVLGGAFFVNGNVNPAAEANIFGDP 172

Query: 120 EAADVVFTSGANIAVVGINITTQVKLTDADFLELRQSKGRYVQLLGDMCKFYRDWHVKSD 179
           EAAD+VFTSGA+I VVGIN+TTQV LTDAD  ELR SKG+Y Q L D+CKFYRDWH KS 
Sbjct: 173 EAADIVFTSGADITVVGINVTTQVVLTDADLEELRDSKGKYAQFLCDICKFYRDWHRKSY 232

Query: 180 GVHGIFLHDPVSFVALVRPDLFTFKKGVVRVETQGICMGHTLMDQGLKRWNVSNPWTGYS 239
           G+ GI+LHDP + +A VRP LFT+K+GVVRVET+GIC G TL D GLKRWN  N WTG  
Sbjct: 233 GIDGIYLHDPTALLAAVRPSLFTYKEGVVRVETEGICRGLTLFDNGLKRWNGENAWTGRP 292

Query: 240 PVSVAWTVNVDKVLNYIKRLLMKQ 263
           PV VA TV+   V+  +K  LM  
Sbjct: 293 PVKVAVTVDAPAVVELVKERLMAS 316

Length = 316
>gnl|CDD|239116 cd02650, nuc_hydro_CaPnhB, NH_hydro_CaPnhB: A subgroup of nucleoside hydrolases similar to Corynebacterium ammoniagenes Purine/pyrimidine nucleoside hydrolase (pnhB) Back     alignment and domain information
>gnl|CDD|224868 COG1957, URH1, Inosine-uridine nucleoside N-ribohydrolase [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|216336 pfam01156, IU_nuc_hydro, Inosine-uridine preferring nucleoside hydrolase Back     alignment and domain information
>gnl|CDD|239117 cd02651, nuc_hydro_IU_UC_XIUA, nuc_hydro_IU_UC_XIUA: inosine-uridine preferring, xanthosine-inosine-uridine-adenosine-preferring and, uridine-cytidine preferring nucleoside hydrolases Back     alignment and domain information
>gnl|CDD|238257 cd00455, nuc_hydro, nuc_hydro: Nucleoside hydrolases Back     alignment and domain information
>gnl|CDD|239119 cd02653, nuc_hydro_3, NH_3: A subgroup of nucleoside hydrolases Back     alignment and domain information
>gnl|CDD|239115 cd02649, nuc_hydro_CeIAG, nuc_hydro_CeIAG: Nucleoside hydrolases similar to the inosine-adenosine-guanosine-preferring nucleoside hydrolase from Caenorhabditis elegans Back     alignment and domain information
>gnl|CDD|182465 PRK10443, rihA, ribonucleoside hydrolase 1; Provisional Back     alignment and domain information
>gnl|CDD|182713 PRK10768, PRK10768, ribonucleoside hydrolase RihC; Provisional Back     alignment and domain information
>gnl|CDD|182166 PRK09955, rihB, ribonucleoside hydrolase 2; Provisional Back     alignment and domain information
>gnl|CDD|239113 cd02647, nuc_hydro_TvIAG, nuc_hydro_ TvIAG: Nucleoside hydrolases similar to the Inosine-adenosine-guanosine-preferring nucleoside hydrolase from Trypanosoma vivax Back     alignment and domain information
>gnl|CDD|239120 cd02654, nuc_hydro_CjNH, nuc_hydro_CjNH Back     alignment and domain information
>gnl|CDD|239114 cd02648, nuc_hydro_1, NH_1: A subgroup of nucleoside hydrolases Back     alignment and domain information
>gnl|CDD|140334 PTZ00313, PTZ00313, inosine-adenosine-guanosine-nucleoside hydrolase; Provisional Back     alignment and domain information
>gnl|CDD|239118 cd02652, nuc_hydro_2, NH_2: A subgroup of nucleoside hydrolases Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 263
COG1957311 URH1 Inosine-uridine nucleoside N-ribohydrolase [N 100.0
PLN02717316 uridine nucleosidase 100.0
PRK09955313 rihB ribonucleoside hydrolase 2; Provisional 100.0
cd02651302 nuc_hydro_IU_UC_XIUA nuc_hydro_IU_UC_XIUA: inosine 100.0
cd02653320 nuc_hydro_3 NH_3: A subgroup of nucleoside hydrola 100.0
PRK10443311 rihA ribonucleoside hydrolase 1; Provisional 100.0
cd02650304 nuc_hydro_CaPnhB NH_hydro_CaPnhB: A subgroup of nu 100.0
PRK10768304 ribonucleoside hydrolase RihC; Provisional 100.0
cd02649306 nuc_hydro_CeIAG nuc_hydro_CeIAG: Nucleoside hydrol 100.0
cd02654318 nuc_hydro_CjNH nuc_hydro_CjNH. Nucleoside hydrolas 100.0
PTZ00313326 inosine-adenosine-guanosine-nucleoside hydrolase; 100.0
cd00455295 nuc_hydro nuc_hydro: Nucleoside hydrolases. Nucleo 100.0
PF01156312 IU_nuc_hydro: Inosine-uridine preferring nucleosid 100.0
cd02647312 nuc_hydro_TvIAG nuc_hydro_ TvIAG: Nucleoside hydro 100.0
cd02648367 nuc_hydro_1 NH_1: A subgroup of nucleoside hydrola 100.0
KOG2938350 consensus Predicted inosine-uridine preferring nuc 100.0
cd02652293 nuc_hydro_2 NH_2: A subgroup of nucleoside hydrola 100.0
PF07632260 DUF1593: Protein of unknown function (DUF1593); In 91.98
KOG2938350 consensus Predicted inosine-uridine preferring nuc 86.54
>COG1957 URH1 Inosine-uridine nucleoside N-ribohydrolase [Nucleotide transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=1e-67  Score=468.54  Aligned_cols=254  Identities=39%  Similarity=0.614  Sum_probs=239.3

Q ss_pred             CCCCCCCeEeeCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHcCCCceEEEEecchHHHHHH
Q 024718            1 MAGCPGVPVAEGSPEPLKGGKPRVAEFAHGSDGMGNISLTPPKAKKCDKNASEFLVDKVSEYPGEVSILALGPLTNLALA   80 (263)
Q Consensus         1 ~~gr~dIPV~~G~~~pl~~~~~~~~~~~hG~dGlg~~~~p~~~~~~~~~~A~~~l~e~~~~~p~~vtivaiGPlTNlA~a   80 (263)
                      ++||.+||||+|+.+||.++. ..++++||++||++..+|.+..++.+++|+++|+|+++++|++||||++|||||||+|
T Consensus        55 ~~g~~~iPV~~Ga~~Pl~r~~-~~a~~iHG~~Gl~~~~lp~~~~~~~~~~A~~~ii~~l~~~~g~vtlva~GPLTNiAlA  133 (311)
T COG1957          55 LLGRADIPVYAGAARPLLREP-ITAPEIHGESGLGGPELPEPTRKLESKHAVDAIIDTLMANPGEVTLVATGPLTNIALA  133 (311)
T ss_pred             HcCCCCCCeecCCCCCcCCCC-cchhhhcCCcCCCCCCCCcccccccCCcHHHHHHHHHHhCCCcEEEEecCChHHHHHH
Confidence            478999999999999999964 6678999999999998888777777899999999999999999999999999999999


Q ss_pred             HHhCcchhhccCcEEEeccccCCCCCCCccccccccCCHHHHHHHHhcCCcEEEEcCccccccccCHHHHHHHHhcCChh
Q 024718           81 IKRDSSFASKVKNIVVLGGAFFALGNVNPAAEANIYGDPEAADVVFTSGANIAVVGINITTQVKLTDADFLELRQSKGRY  160 (263)
Q Consensus        81 l~~~P~~~~~i~~i~iMGG~~~~~Gn~~~~aE~N~~~DpeAA~~Vl~s~~~i~lvpldvt~~~~~~~~~~~~l~~~~~~~  160 (263)
                      ++++|++.++||+|+||||++..+||++|.||||+|.|||||++||+|+++++|+|||+|+|+..+.+.++.+++.+++.
T Consensus       134 l~~~P~i~~~ik~iviMGGa~~~~GNvtp~AEfNi~~DPeAA~iVf~sg~~i~mv~LdvT~q~~~t~~~~~~~~~~~~~~  213 (311)
T COG1957         134 LRKDPEIAKRIKEIVIMGGAFFVPGNVTPAAEFNIWVDPEAAKIVFTSGWPITMVPLDVTHQVLLTPDVLARLRAAGGPA  213 (311)
T ss_pred             HHhCcchhhhhcEEEEecCccCCCCCcCcchhhhhccCHHHHHHHHhCCCceEEechhhhhhhcCCHHHHHHHHHhCCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999988999


Q ss_pred             hHHHHHHHHHHHHhhhhcCCCCcccCchHHHHHHHhcCCceeeEeeeEEEEecC-CcceeEEEecCCcccccCCCCCCCC
Q 024718          161 VQLLGDMCKFYRDWHVKSDGVHGIFLHDPVSFVALVRPDLFTFKKGVVRVETQG-ICMGHTLMDQGLKRWNVSNPWTGYS  239 (263)
Q Consensus       161 ~~~l~~~~~~~~~~~~~~~~~~~~~~~D~la~a~~~~P~~~~~~~~~v~V~~~g-~~~G~~~~d~~~~~~~~~~~~~~~~  239 (263)
                      ++++.+++++|.+++...+|.+|.++||++|++++++|++|+.+++.|+||+.| +|+|+|+.|+...       +...+
T Consensus       214 ~~~~~d~l~~~~~~~~~~~g~~g~~~hD~~a~a~l~~p~l~~~~~~~V~Ve~~~~lt~G~Tv~d~~~~-------~~~~~  286 (311)
T COG1957         214 AELVADLLDFYLAYYKSRQGLDGAPLHDPLAVAYLLDPELFTTREANVDVETAGGLTRGMTVVDWRGV-------LGKPP  286 (311)
T ss_pred             HHHHHHHHHHHHHHHhhccCCCCCCcccHHHHHHHhChhhhcceEEEEEEEeCCCCcCcceEEEeccc-------CCCCC
Confidence            999999999999999887788999999999999999999999999999999997 9999999997532       34578


Q ss_pred             CcEEEeecCHHHHHHHHHHHHhc
Q 024718          240 PVSVAWTVNVDKVLNYIKRLLMK  262 (263)
Q Consensus       240 ~v~v~~~vd~~~f~~~l~~~l~~  262 (263)
                      |++++.++|.++|++.+.++|.+
T Consensus       287 n~~v~~~vD~~~f~~~i~~~l~~  309 (311)
T COG1957         287 NAQVAVDVDVEGFLDLILEALAR  309 (311)
T ss_pred             CeEEeeccCHHHHHHHHHHHHhc
Confidence            99999999999999999999875

>PLN02717 uridine nucleosidase Back     alignment and domain information
>PRK09955 rihB ribonucleoside hydrolase 2; Provisional Back     alignment and domain information
>cd02651 nuc_hydro_IU_UC_XIUA nuc_hydro_IU_UC_XIUA: inosine-uridine preferring, xanthosine-inosine-uridine-adenosine-preferring and, uridine-cytidine preferring nucleoside hydrolases Back     alignment and domain information
>cd02653 nuc_hydro_3 NH_3: A subgroup of nucleoside hydrolases Back     alignment and domain information
>PRK10443 rihA ribonucleoside hydrolase 1; Provisional Back     alignment and domain information
>cd02650 nuc_hydro_CaPnhB NH_hydro_CaPnhB: A subgroup of nucleoside hydrolases similar to Corynebacterium ammoniagenes Purine/pyrimidine nucleoside hydrolase (pnhB) Back     alignment and domain information
>PRK10768 ribonucleoside hydrolase RihC; Provisional Back     alignment and domain information
>cd02649 nuc_hydro_CeIAG nuc_hydro_CeIAG: Nucleoside hydrolases similar to the inosine-adenosine-guanosine-preferring nucleoside hydrolase from Caenorhabditis elegans Back     alignment and domain information
>cd02654 nuc_hydro_CjNH nuc_hydro_CjNH Back     alignment and domain information
>PTZ00313 inosine-adenosine-guanosine-nucleoside hydrolase; Provisional Back     alignment and domain information
>cd00455 nuc_hydro nuc_hydro: Nucleoside hydrolases Back     alignment and domain information
>PF01156 IU_nuc_hydro: Inosine-uridine preferring nucleoside hydrolase; InterPro: IPR001910 Inosine-uridine preferring nucleoside hydrolase (3 Back     alignment and domain information
>cd02647 nuc_hydro_TvIAG nuc_hydro_ TvIAG: Nucleoside hydrolases similar to the Inosine-adenosine-guanosine-preferring nucleoside hydrolase from Trypanosoma vivax Back     alignment and domain information
>cd02648 nuc_hydro_1 NH_1: A subgroup of nucleoside hydrolases Back     alignment and domain information
>KOG2938 consensus Predicted inosine-uridine preferring nucleoside hydrolase [Nucleotide transport and metabolism] Back     alignment and domain information
>cd02652 nuc_hydro_2 NH_2: A subgroup of nucleoside hydrolases Back     alignment and domain information
>PF07632 DUF1593: Protein of unknown function (DUF1593); InterPro: IPR011483 This is a family of proteins found in Rhodopirellula baltica that are predicted to be secreted Back     alignment and domain information
>KOG2938 consensus Predicted inosine-uridine preferring nucleoside hydrolase [Nucleotide transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query263
3t8j_A311 Structural Analysis Of Thermostable S. Solfataricus 5e-31
3g5i_A312 Crystal Structure Of The E.Coli Riha Pyrimidine Nuc 1e-27
1yoe_A322 Crystal Structure Of A The E. Coli Pyrimidine Nucle 1e-27
1ezr_A314 Crystal Structure Of Nucleoside Hydrolase From Leis 6e-27
3mkm_A316 Crystal Structure Of The E. Coli Pyrimidine Nucleos 6e-27
1q8f_A313 Crystal Structure Of The E.Coli Pyrimidine Nucleosi 7e-27
3b9x_A333 Crystal Structure Of The E. Coli Pyrimidine Nucleos 7e-27
1mas_A314 Purine Nucleoside Hydrolase Length = 314 3e-22
3t8i_A306 Structural Analysis Of Thermostable S. Solfataricus 8e-22
2c40_A312 Crystal Structure Of Inosine-Uridine Preferring Nuc 7e-11
1hp0_A339 Crystal Structure Of An Inosine-Adenosine-Guanosine 2e-07
1kic_A339 Inosine-adenosine-guanosine Preferring Nucleoside H 2e-07
3epw_A338 Crystal Structure Of Trypanosoma Vivax Nucleoside H 2e-07
3b9g_A328 Crystal Structure Of Loop Deletion Mutant Of Trypan 2e-07
1r4f_A339 Inosine-Adenosine-Guanosine Preferring Nucleoside H 2e-07
3fz0_A360 Inosine-Guanosine Nucleoside Hydrolase (Ig-Nh) Leng 5e-06
>pdb|3T8J|A Chain A, Structural Analysis Of Thermostable S. Solfataricus Pyrimidine- Specific Nucleoside Hydrolase Length = 311 Back     alignment and structure 
Iteration: 1

 Score =  131 bits (329), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 134/256 (52%), Gaps = 7/256 (2%)
Query: 7   VPVAEGSPEPLKGGKPRVAEFAHGSDGMGNISLTPPKAKKCDKNASEFLVDKVSEYPGEV 66
           +PV  G+ +PL      V E  HG  G+G++++ P + K  +K+A+  ++D  +EY GE+
Sbjct: 58  IPVYPGANKPLLKNYITV-EKVHGKGGIGDVTVEPKRLKAQEKHAALAIIDLANEYAGEL 116
Query: 67  SILALGPLTNLALAIKRDSSFASKVKNIVVLGGAFFALGNVNPAAEANIYGDPEAADVVF 126
             LA+ PLTNLALA   D+S   K+K + V+GGA F +GN+ P AE NI+ DP+AA +VF
Sbjct: 117 EFLAISPLTNLALAYLLDNSIVKKIKKVWVMGGAVFGIGNITPVAEFNIWVDPDAAKIVF 176
Query: 127 TSGANIAVVGINITTQVKLTDADFLELRQSKGRYVQLLGDMCKFYRDWHVKSDGVHGIFL 186
            +G +I ++  ++     +TD ++  ++  K R  +L   M   YR +      ++G   
Sbjct: 177 NAGFDITMIPWDVIINYPVTDEEWNVIKNMKTRMSELYVSMYLHYRQYSSTVQKINGHPH 236
Query: 187 HDPVSFVALVRPDLFTF--KKGVVRVETQGICMGHTLMDQGLKRWNVSNPWTGYSPVSVA 244
            D ++    +   + T   K+ VV   T  I  G TL+D    R++    W+      + 
Sbjct: 237 PDAITTAIAIDGSIATRREKRFVVIDNTDNITRGMTLVD----RFDADTSWSDKPNAEIV 292
Query: 245 WTVNVDKVLNYIKRLL 260
           + +N    +  I  LL
Sbjct: 293 YEINKKSFMEKIYDLL 308
>pdb|3G5I|A Chain A, Crystal Structure Of The E.Coli Riha Pyrimidine Nucleosidase Bound To A Iminoribitol-Based Inhibitor Length = 312 Back     alignment and structure
>pdb|1YOE|A Chain A, Crystal Structure Of A The E. Coli Pyrimidine Nucleoside Hydrolase Ybek With Bound Ribose Length = 322 Back     alignment and structure
>pdb|1EZR|A Chain A, Crystal Structure Of Nucleoside Hydrolase From Leishmania Major Length = 314 Back     alignment and structure
>pdb|3MKM|A Chain A, Crystal Structure Of The E. Coli Pyrimidine Nucleoside Hydrolase Yeik (Apo-Form) Length = 316 Back     alignment and structure
>pdb|1Q8F|A Chain A, Crystal Structure Of The E.Coli Pyrimidine Nucleoside Hydrolase Yeik Length = 313 Back     alignment and structure
>pdb|3B9X|A Chain A, Crystal Structure Of The E. Coli Pyrimidine Nucleoside Hydrolase Yeik In Complex With Inosine Length = 333 Back     alignment and structure
>pdb|1MAS|A Chain A, Purine Nucleoside Hydrolase Length = 314 Back     alignment and structure
>pdb|3T8I|A Chain A, Structural Analysis Of Thermostable S. Solfataricus Purine-Specific Nucleoside Hydrolase Length = 306 Back     alignment and structure
>pdb|2C40|A Chain A, Crystal Structure Of Inosine-Uridine Preferring Nucleoside Hydrolase From Bacillus Anthracis At 2.2a Resolution Length = 312 Back     alignment and structure
>pdb|1HP0|A Chain A, Crystal Structure Of An Inosine-Adenosine-Guanosine- Preferring Nucleoside Hydrolase From Trypanosoma Vivax In Complex With The Substrate Analogue 3-Deaza-Adenosine Length = 339 Back     alignment and structure
>pdb|1KIC|A Chain A, Inosine-adenosine-guanosine Preferring Nucleoside Hydrolase From Trypanosoma Vivax: Asp10ala Mutant In Complex With Inosine Length = 339 Back     alignment and structure
>pdb|3EPW|A Chain A, Crystal Structure Of Trypanosoma Vivax Nucleoside Hydrolase In Complex With The Inhibitor (2r,3r,4s)-1-[(4-Hydroxy-5h-Pyrrolo[3,2- D]pyrimidin-7-Yl)methyl]-2-(Hydroxymethyl)pyrrolidin-3, 4-Diol Length = 338 Back     alignment and structure
>pdb|3B9G|A Chain A, Crystal Structure Of Loop Deletion Mutant Of Trypanosoma Vivax Nucleoside Hydrolase (3gtvnh) In Complex With Immh Length = 328 Back     alignment and structure
>pdb|1R4F|A Chain A, Inosine-Adenosine-Guanosine Preferring Nucleoside Hydrolase From Trypanosoma Vivax: Trp260ala Mutant In Complex With 3- Deaza-Adenosine Length = 339 Back     alignment and structure
>pdb|3FZ0|A Chain A, Inosine-Guanosine Nucleoside Hydrolase (Ig-Nh) Length = 360 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query263
3t8j_A311 Purine nucleosidase, (IUNH-1); nucleoside hydrolas 1e-103
2mas_A314 Inosine-uridine nucleoside N-ribohydrolase; purine 2e-96
3t8i_A306 Purine nucleosidase, (IUNH-2); purine nucleoside h 1e-93
1q8f_A313 Pyrimidine nucleoside hydrolase; open alpha-beta s 2e-93
1yoe_A322 Hypothetical protein YBEK; pyrimidine nucleoside h 2e-93
2c40_A312 Inosine-uridine preferring nucleoside hydrolase F 9e-89
3epw_A338 IAG-nucleoside hydrolase; rossmann fold, active si 1e-80
3fz0_A360 Nucleoside hydrolase, putative; NH fold, open alph 3e-71
>3t8j_A Purine nucleosidase, (IUNH-1); nucleoside hydrolase, thermostable protein, open (alpha,beta structure, rossmann fold, NH-fold; 1.60A {Sulfolobus solfataricus} Length = 311 Back     alignment and structure
 Score =  302 bits (775), Expect = e-103
 Identities = 76/256 (29%), Positives = 133/256 (51%), Gaps = 7/256 (2%)

Query: 7   VPVAEGSPEPLKGGKPRVAEFAHGSDGMGNISLTPPKAKKCDKNASEFLVDKVSEYPGEV 66
           +PV  G+ +PL        E  HG  G+G++++ P + K  +K+A+  ++D  +EY GE+
Sbjct: 58  IPVYPGANKPLLK-NYITVEKVHGKGGIGDVTVEPKRLKAQEKHAALAIIDLANEYAGEL 116

Query: 67  SILALGPLTNLALAIKRDSSFASKVKNIVVLGGAFFALGNVNPAAEANIYGDPEAADVVF 126
             LA+ PLTNLALA   D+S   K+K + V+GGA F +GN+ P AE NI+ DP+AA +VF
Sbjct: 117 EFLAISPLTNLALAYLLDNSIVKKIKKVWVMGGAVFGIGNITPVAEFNIWVDPDAAKIVF 176

Query: 127 TSGANIAVVGINITTQVKLTDADFLELRQSKGRYVQLLGDMCKFYRDWHVKSDGVHGIFL 186
            +G +I ++  ++     +TD ++  ++  K R  +L   M   YR +      ++G   
Sbjct: 177 NAGFDITMIPWDVIINYPVTDEEWNVIKNMKTRMSELYVSMYLHYRQYSSTVQKINGHPH 236

Query: 187 HDPVSFVALVRPDLFTFKKGV-VRVETQG-ICMGHTLMDQGLKRWNVSNPWTGYSPVSVA 244
            D ++    +   + T ++   V ++    I  G TL+D    R++    W+      + 
Sbjct: 237 PDAITTAIAIDGSIATRREKRFVVIDNTDNITRGMTLVD----RFDADTSWSDKPNAEIV 292

Query: 245 WTVNVDKVLNYIKRLL 260
           + +N    +  I  LL
Sbjct: 293 YEINKKSFMEKIYDLL 308
>2mas_A Inosine-uridine nucleoside N-ribohydrolase; purine nucleoside hydrolase, IU-NH, purine nucleosidase; HET: PIR; 2.30A {Crithidia fasciculata} SCOP: c.70.1.1 PDB: 1mas_A* 1ezr_A Length = 314 Back     alignment and structure
>3t8i_A Purine nucleosidase, (IUNH-2); purine nucleoside hydrolase, thermostable protein, open (ALP structure, rossmann fold, NH-fold; 1.80A {Sulfolobus solfataricus} Length = 306 Back     alignment and structure
>1q8f_A Pyrimidine nucleoside hydrolase; open alpha-beta structure, NH-fold; 1.70A {Escherichia coli} SCOP: c.70.1.1 PDB: 3b9x_A* 3mkn_A* 3mkm_A* Length = 313 Back     alignment and structure
>1yoe_A Hypothetical protein YBEK; pyrimidine nucleoside hydrolase, bacterial nucleosidase, RIB enzyme-product complex, hydrolase; HET: RIB; 1.78A {Escherichia coli} PDB: 3g5i_A* Length = 322 Back     alignment and structure
>2c40_A Inosine-uridine preferring nucleoside hydrolase F protein; spine; 2.2A {Bacillus anthracis} Length = 312 Back     alignment and structure
>3epw_A IAG-nucleoside hydrolase; rossmann fold, active site loops, aromatic stacking; HET: JMQ; 1.30A {Trypanosoma vivax} PDB: 3epx_A* 1hoz_A 1hp0_A* 2ff1_A* 2ff2_A* 1kic_A* 1kie_A* 1r4f_A* 3b9g_A* Length = 338 Back     alignment and structure
>3fz0_A Nucleoside hydrolase, putative; NH fold, open alpha/beta structure, glycosidase; HET: BTB; 2.50A {Trypanosoma brucei} Length = 360 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query263
3t8j_A311 Purine nucleosidase, (IUNH-1); nucleoside hydrolas 100.0
1q8f_A313 Pyrimidine nucleoside hydrolase; open alpha-beta s 100.0
1yoe_A322 Hypothetical protein YBEK; pyrimidine nucleoside h 100.0
3t8i_A306 Purine nucleosidase, (IUNH-2); purine nucleoside h 100.0
2mas_A314 Inosine-uridine nucleoside N-ribohydrolase; purine 100.0
3fz0_A360 Nucleoside hydrolase, putative; NH fold, open alph 100.0
2c40_A312 Inosine-uridine preferring nucleoside hydrolase F 100.0
3epw_A338 IAG-nucleoside hydrolase; rossmann fold, active si 100.0
2yhg_A437 SDE_182CT, cellulose-binding protein; hydrolase, g 97.44
>3t8j_A Purine nucleosidase, (IUNH-1); nucleoside hydrolase, thermostable protein, open (alpha,beta structure, rossmann fold, NH-fold; 1.60A {Sulfolobus solfataricus} Back     alignment and structure
Probab=100.00  E-value=2.9e-65  Score=458.27  Aligned_cols=256  Identities=30%  Similarity=0.501  Sum_probs=234.3

Q ss_pred             CCCCCCCeEeeCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHcCCCceEEEEecchHHHHHH
Q 024718            1 MAGCPGVPVAEGSPEPLKGGKPRVAEFAHGSDGMGNISLTPPKAKKCDKNASEFLVDKVSEYPGEVSILALGPLTNLALA   80 (263)
Q Consensus         1 ~~gr~dIPV~~G~~~pl~~~~~~~~~~~hG~dGlg~~~~p~~~~~~~~~~A~~~l~e~~~~~p~~vtivaiGPlTNlA~a   80 (263)
                      ++|| |||||+|+.+||.++. ..++++||.+|||+..+|.+...+.+++|+++|+++++++|++||||++|||||||+|
T Consensus        53 ~~g~-diPV~~Ga~~Pl~~~~-~~a~~~hG~~Glg~~~~p~~~~~~~~~~A~~~i~~~~~~~~~~vtiva~GpLTNlA~a  130 (311)
T 3t8j_A           53 QVNR-EIPVYPGANKPLLKNY-ITVEKVHGKGGIGDVTVEPKRLKAQEKHAALAIIDLANEYAGELEFLAISPLTNLALA  130 (311)
T ss_dssp             HTTC-CCCEEECCSSCSSSCC-CCCHHHHCTTSSSSCCCCCSSCCCCSSCHHHHHHHHHHHTTTTEEEEECSCSHHHHHH
T ss_pred             HcCC-CCCEEECCCCCCCCCC-ccchhhcCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHhCCCCeEEEEecChHHHHHH
Confidence            3799 9999999999999864 5678899999999999988777777899999999999999999999999999999999


Q ss_pred             HHhCcchhhccCcEEEeccccCCCCCCCccccccccCCHHHHHHHHhcCCcEEEEcCccccccccCHHHHHHHHhcCChh
Q 024718           81 IKRDSSFASKVKNIVVLGGAFFALGNVNPAAEANIYGDPEAADVVFTSGANIAVVGINITTQVKLTDADFLELRQSKGRY  160 (263)
Q Consensus        81 l~~~P~~~~~i~~i~iMGG~~~~~Gn~~~~aE~N~~~DpeAA~~Vl~s~~~i~lvpldvt~~~~~~~~~~~~l~~~~~~~  160 (263)
                      ++++|++.++|++||||||++...||++|.+|||||+|||||++||+|++|++|+|||+|++..+++++++++++.++++
T Consensus       131 l~~~P~i~~~i~~iviMGG~~~~~GN~tp~aEfN~~~DPeAA~~V~~sg~~i~~v~ldvt~~~~lt~~~~~~l~~~~~~~  210 (311)
T 3t8j_A          131 YLLDNSIVKKIKKVWVMGGAVFGIGNITPVAEFNIWVDPDAAKIVFNAGFDITMIPWDVIINYPVTDEEWNVIKNMKTRM  210 (311)
T ss_dssp             HHHCTTHHHHEEEEEEECCCTTSCCSSSSSCCHHHHHCHHHHHHHHHTTCCEEEECHHHHTTSCBCHHHHHHHHTSCSHH
T ss_pred             HHHChHHHhhcCEEEEcCCcccCCCCCCchhhhccccCHHHHHHHHhCCCCEEEecccccccccCCHHHHHHHHhhCCHH
Confidence            99999999999999999999988999999999999999999999999999999999999988888999999999888899


Q ss_pred             hHHHHHHHHHHHHhhhhcCCCCcccCchHHHHHHHhcCCcee-eEeeeEEEEecC-CcceeEEEecCCcccccCCCCCCC
Q 024718          161 VQLLGDMCKFYRDWHVKSDGVHGIFLHDPVSFVALVRPDLFT-FKKGVVRVETQG-ICMGHTLMDQGLKRWNVSNPWTGY  238 (263)
Q Consensus       161 ~~~l~~~~~~~~~~~~~~~~~~~~~~~D~la~a~~~~P~~~~-~~~~~v~V~~~g-~~~G~~~~d~~~~~~~~~~~~~~~  238 (263)
                      ++|+.+++++|.+++.+.++..++++||++|++++++|++|+ +++.+|+|+++| .+||+|+.|+....    ..+...
T Consensus       211 ~~~~~~~~~~~~~~~~~~~g~~g~~lhD~lava~~l~P~l~~~~~~~~v~Ve~~g~~t~G~tv~d~~~~~----~~~~~~  286 (311)
T 3t8j_A          211 SELYVSMYLHYRQYSSTVQKINGHPHPDAITTAIAIDGSIATRREKRFVVIDNTDNITRGMTLVDRFDAD----TSWSDK  286 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHTSCCSSBCCHHHHHHHHHHCGGGEEEEEEEEEEECCSSSTTTTCEEEECSCSS----SCSCSS
T ss_pred             HHHHHHHHHHHHHHHHhhcCCCCCcCcCHHHHHHHhCHHHhhccceeeEEEecCCCCCCceEEEecCCCc----ccCCCC
Confidence            999999999999887777778899999999999999999997 689999999996 79999999975320    112346


Q ss_pred             CCcEEEeecCHHHHHHHHHHHHhc
Q 024718          239 SPVSVAWTVNVDKVLNYIKRLLMK  262 (263)
Q Consensus       239 ~~v~v~~~vd~~~f~~~l~~~l~~  262 (263)
                      +|++|+++||.++|+++|.++|.+
T Consensus       287 ~n~~v~~~vD~~~f~~~~~~~l~~  310 (311)
T 3t8j_A          287 PNAEIVYEINKKSFMEKIYDLLNW  310 (311)
T ss_dssp             CCEEEEEEECHHHHHHHHHHHHTC
T ss_pred             CCEEEeeccCHHHHHHHHHHHHhh
Confidence            799999999999999999999865
>1q8f_A Pyrimidine nucleoside hydrolase; open alpha-beta structure, NH-fold; 1.70A {Escherichia coli} SCOP: c.70.1.1 PDB: 3b9x_A* 3mkn_A* 3mkm_A* Back     alignment and structure
>1yoe_A Hypothetical protein YBEK; pyrimidine nucleoside hydrolase, bacterial nucleosidase, RIB enzyme-product complex, hydrolase; HET: RIB; 1.78A {Escherichia coli} PDB: 3g5i_A* Back     alignment and structure
>3t8i_A Purine nucleosidase, (IUNH-2); purine nucleoside hydrolase, thermostable protein, open (ALP structure, rossmann fold, NH-fold; 1.80A {Sulfolobus solfataricus} Back     alignment and structure
>2mas_A Inosine-uridine nucleoside N-ribohydrolase; purine nucleoside hydrolase, IU-NH, purine nucleosidase; HET: PIR; 2.30A {Crithidia fasciculata} SCOP: c.70.1.1 PDB: 1mas_A* 1ezr_A Back     alignment and structure
>3fz0_A Nucleoside hydrolase, putative; NH fold, open alpha/beta structure, glycosidase; HET: BTB; 2.50A {Trypanosoma brucei} Back     alignment and structure
>2c40_A Inosine-uridine preferring nucleoside hydrolase F protein; spine; 2.2A {Bacillus anthracis} Back     alignment and structure
>3epw_A IAG-nucleoside hydrolase; rossmann fold, active site loops, aromatic stacking; HET: JMQ; 1.30A {Trypanosoma vivax} SCOP: c.70.1.1 PDB: 3epx_A* 1hoz_A 1hp0_A* 2ff1_A* 2ff2_A* 1kic_A* 1kie_A* 1r4f_A* 3b9g_A* Back     alignment and structure
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 263
d1kica_327 c.70.1.1 (A:) Inosine-adenosine-guanosine preferri 5e-55
d2masa_313 c.70.1.1 (A:) Inosine-uridine nucleoside N-ribohyd 1e-50
d1q8fa_308 c.70.1.1 (A:) Pyrimidine nucleoside hydrolase YeiK 8e-50
>d1kica_ c.70.1.1 (A:) Inosine-adenosine-guanosine preferring nucleoside hydrolase {Trypanosoma vivax [TaxId: 5699]} Length = 327 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleoside hydrolase
superfamily: Nucleoside hydrolase
family: Nucleoside hydrolase
domain: Inosine-adenosine-guanosine preferring nucleoside hydrolase
species: Trypanosoma vivax [TaxId: 5699]

 Score =  178 bits (451), Expect = 5e-55
 Identities = 56/278 (20%), Positives = 89/278 (32%), Gaps = 28/278 (10%)

Query: 1   MAGCPGVPVAEGSPEPLKGGKPRVAEF---AHGSDGMGNI-------SLTPPKAKKCDKN 50
           M     +P+            P   E+   A   D M  +            KA+     
Sbjct: 57  MHNNMNLPLFPIGKSAATAVNPFPKEWRCLAKNMDDMPILNIPENVELWDKIKAENEKYE 116

Query: 51  ASEFLVDKVSEYPGEVSILALGPLTNLALAIKRDS-SFASKVKNIVVLGGAFFALGNV-- 107
             + L D V     +V+I   GPL+N+A  I +    F SKV+  V++GGA    GNV  
Sbjct: 117 GQQLLADLVMNSEEKVTICVTGPLSNVAWCIDKYGEKFTSKVEECVIMGGAVDVRGNVFL 176

Query: 108 ---NPAAEANIYGDPEAADVVFTS-GANIAVVGINITTQVKLTDADFLELRQSKGRYVQL 163
              +  AE NIY DP +A  VF   G    +  ++ T  V +         +     + +
Sbjct: 177 PSTDGTAEWNIYWDPASAKTVFGCPGLRRIMFSLDSTNTVPVRSPYVQRFGEQTNFLLSI 236

Query: 164 LGDMCKFYRDWHVKSDGVHGIFLHDPVSFVALVRPDLFTFKKGVVRVETQG-ICMGHTLM 222
           L                  G +  D ++   +V   +       + V        G T+ 
Sbjct: 237 LVGTMWAMCTHCELLRDGDGYYAWDALTAAYVVDQKVANVDPVPIDVVVDKQPNEGATVR 296

Query: 223 DQGLKRWNVSNPWTGYSPVSVAWTVNVDKVLNYIKRLL 260
                          Y    VA     +  L+ + R  
Sbjct: 297 T----------DAENYPLTFVARNPEAEFFLDMLLRSA 324
>d2masa_ c.70.1.1 (A:) Inosine-uridine nucleoside N-ribohydrolase, IU-NH {Crithidia fasciculata [TaxId: 5656]} Length = 313 Back     information, alignment and structure
>d1q8fa_ c.70.1.1 (A:) Pyrimidine nucleoside hydrolase YeiK {Escherichia coli [TaxId: 562]} Length = 308 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query263
d2masa_313 Inosine-uridine nucleoside N-ribohydrolase, IU-NH 100.0
d1q8fa_308 Pyrimidine nucleoside hydrolase YeiK {Escherichia 100.0
d1kica_327 Inosine-adenosine-guanosine preferring nucleoside 100.0
>d2masa_ c.70.1.1 (A:) Inosine-uridine nucleoside N-ribohydrolase, IU-NH {Crithidia fasciculata [TaxId: 5656]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleoside hydrolase
superfamily: Nucleoside hydrolase
family: Nucleoside hydrolase
domain: Inosine-uridine nucleoside N-ribohydrolase, IU-NH
species: Crithidia fasciculata [TaxId: 5656]

Probab=100.00  E-value=6.6e-62  Score=435.79  Aligned_cols=253  Identities=26%  Similarity=0.443  Sum_probs=231.3

Q ss_pred             CCCCCCCeEeeCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCC-CCCCccHHHHHHHHHHcC-CCceEEEEecchHHHH
Q 024718            1 MAGCPGVPVAEGSPEPLKGGKPRVAEFAHGSDGMGNISLTPPKA-KKCDKNASEFLVDKVSEY-PGEVSILALGPLTNLA   78 (263)
Q Consensus         1 ~~gr~dIPV~~G~~~pl~~~~~~~~~~~hG~dGlg~~~~p~~~~-~~~~~~A~~~l~e~~~~~-p~~vtivaiGPlTNlA   78 (263)
                      ++||++||||+|++.|+.+.. ....++||.||+|+..+|.+.. ...+.+|+++++++++++ |++||||++|||||||
T Consensus        54 ~~g~~~iPV~~G~~~~~~~~~-~~~~~~~g~~g~g~~~~p~~~~~~~~~~~a~~~~i~~~~~~~p~~itiva~GPLTNlA  132 (313)
T d2masa_          54 IAGITGVPIAAGCDKPLVRKI-MTAGHIHGESGMGTVAYPAEFKNKVDERHAVNLIIDLVMSHEPKTITLVPTGGLTNIA  132 (313)
T ss_dssp             HTTCCSCCEEECCSSCSSSCC-CCCHHHHCSSSSTTCCCCSSCSSCBCSSCHHHHHHHHHHHSCTTCEEEEECSCSHHHH
T ss_pred             HhCCCCCcEEecCCCcccccc-cchhhccccCCCCCccCCccccccccchhhhHHHHHHHhhcCCCcEEEEEcCCchHHH
Confidence            479999999999999998854 5677899999999998876554 345789999999988766 8999999999999999


Q ss_pred             HHHHhCcchhhccCcEEEeccccCCCCCCCccccccccCCHHHHHHHHhcCCcEEEEcCccccccccCHHHHHHHHhcCC
Q 024718           79 LAIKRDSSFASKVKNIVVLGGAFFALGNVNPAAEANIYGDPEAADVVFTSGANIAVVGINITTQVKLTDADFLELRQSKG  158 (263)
Q Consensus        79 ~al~~~P~~~~~i~~i~iMGG~~~~~Gn~~~~aE~N~~~DpeAA~~Vl~s~~~i~lvpldvt~~~~~~~~~~~~l~~~~~  158 (263)
                      +|++++|++.++||+||||||++. .||++|.+|||||+|||||++||+|++|++++|||+|+++.++.+.++++.+.++
T Consensus       133 ~al~~~P~~~~~ik~iviMGG~~~-~GN~~~~aEfN~~~DPeAA~iVl~s~~~i~~v~ldvt~~~~~~~~~~~~~~~~~~  211 (313)
T d2masa_         133 MAARLEPRIVDRVKEVVLMGGGYH-EGNATSVAEFNIIIDPEAAHIVFNESWQVTMVGLDLTHQALATPPILQRVKEVDT  211 (313)
T ss_dssp             HHHHHCTHHHHHSCEEEEECCCSS-CCSSSSSCCHHHHTCHHHHHHHHHSSSCEEEECHHHHTTCEECHHHHHHHHTTCS
T ss_pred             HHHHhhhhhhhhcCeEEEeccCCC-CCCCccccccceeeChHHHHHHhccCCCeEEecchhhhcccCCHHHHHHHHHhhh
Confidence            999999999999999999999997 6999999999999999999999999999999999999999999999999999889


Q ss_pred             hhhHHHHHHHHHHHHhhhhcCCCCcccCchHHHHHHHhcCCceeeEeeeEEEEecC-CcceeEEEecCCcccccCCCCCC
Q 024718          159 RYVQLLGDMCKFYRDWHVKSDGVHGIFLHDPVSFVALVRPDLFTFKKGVVRVETQG-ICMGHTLMDQGLKRWNVSNPWTG  237 (263)
Q Consensus       159 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~la~a~~~~P~~~~~~~~~v~V~~~g-~~~G~~~~d~~~~~~~~~~~~~~  237 (263)
                      +.++++.+++++|.+++.+.++..++++||++|++++++|++|++++.+|+|+++| .+||+|++|+...       +..
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~D~lA~a~~idP~l~~~~~~~v~Vet~g~~trG~tv~d~~~~-------~~~  284 (313)
T d2masa_         212 NPARFMLEIMDYYTKIYQSNRYMAAAAVHDPCAVAYVIDPSVMTTERVPVDIELTGKLTLGMTVADFRNP-------RPE  284 (313)
T ss_dssp             HHHHHHHHHHHHHHHHHHSTTCCSSEECCHHHHHHHHHCGGGEEEEECCEEECSSCSSCTTCEEECCCSS-------CCS
T ss_pred             hHHHHHHHHHHHHHHHHHhccCcCCCccCcHHHhHHhcCcceeEEEEEeEEEEeCCCCCCCeEEEecccC-------CCC
Confidence            99999999999999888777777889999999999999999999999999999997 7999999997532       235


Q ss_pred             CCCcEEEeecCHHHHHHHHHHHHhc
Q 024718          238 YSPVSVAWTVNVDKVLNYIKRLLMK  262 (263)
Q Consensus       238 ~~~v~v~~~vd~~~f~~~l~~~l~~  262 (263)
                      .+|++|+++||.++|+++|.++|.+
T Consensus       285 ~~n~~V~~~vD~~~F~~~l~~~L~r  309 (313)
T d2masa_         285 HCHTQVAVKLDFEKFWGLVLDALER  309 (313)
T ss_dssp             SCSEEEEEEECHHHHHHHHHHHHHH
T ss_pred             CCCeEEEeeCCHHHHHHHHHHHHHh
Confidence            6799999999999999999999865
>d1q8fa_ c.70.1.1 (A:) Pyrimidine nucleoside hydrolase YeiK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1kica_ c.70.1.1 (A:) Inosine-adenosine-guanosine preferring nucleoside hydrolase {Trypanosoma vivax [TaxId: 5699]} Back     information, alignment and structure