Citrus Sinensis ID: 024752
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 263 | 2.2.26 [Sep-21-2011] | |||||||
| P50165 | 268 | Tropinone reductase homol | N/A | no | 0.980 | 0.962 | 0.616 | 1e-96 | |
| P50162 | 273 | Tropinone reductase 1 OS= | N/A | no | 0.977 | 0.941 | 0.604 | 3e-92 | |
| Q9ASX2 | 266 | Tropinone reductase homol | no | no | 0.969 | 0.958 | 0.613 | 2e-91 | |
| P50163 | 260 | Tropinone reductase 2 OS= | N/A | no | 0.950 | 0.961 | 0.56 | 4e-82 | |
| P50164 | 260 | Tropinone reductase 2 OS= | N/A | no | 0.969 | 0.980 | 0.545 | 2e-81 | |
| Q9X248 | 246 | 3-oxoacyl-[acyl-carrier-p | no | no | 0.923 | 0.987 | 0.338 | 2e-31 | |
| P94681 | 252 | 4-formylbenzenesulfonate | yes | no | 0.950 | 0.992 | 0.325 | 7e-31 | |
| P39640 | 253 | Bacilysin biosynthesis ox | yes | no | 0.939 | 0.976 | 0.343 | 1e-30 | |
| Q8SPU8 | 279 | Dehydrogenase/reductase S | yes | no | 0.935 | 0.881 | 0.335 | 1e-30 | |
| P50199 | 256 | Gluconate 5-dehydrogenase | yes | no | 0.939 | 0.964 | 0.321 | 3e-30 |
| >sp|P50165|TRNH_DATST Tropinone reductase homolog OS=Datura stramonium PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 352 bits (903), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 159/258 (61%), Positives = 212/258 (82%)
Query: 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVS 65
++RWSL+GMTALVTGGT+GIGYA+VEELA FGA V+TCSR++ +L++ +++W+ KG +VS
Sbjct: 10 DRRWSLRGMTALVTGGTRGIGYAIVEELANFGAEVYTCSRSQNDLDECLEKWRRKGFKVS 69
Query: 66 GSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFES 125
G VCD+ +QR+ LME+V+S F+GKLNILINNAGT IPKE T FT ED+S +M TNFE+
Sbjct: 70 GPVCDVSSISQRQTLMESVTSSFNGKLNILINNAGTTIPKEATNFTAEDYSIIMGTNFEA 129
Query: 126 AYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDK 185
+Y+L QLAHPLLK++GN +I+F SS AGVIA+P+ SIYA+SK A+NQ+TK+LACEWAKD
Sbjct: 130 SYNLCQLAHPLLKASGNASIVFNSSAAGVIAVPLSSIYAASKGAINQVTKSLACEWAKDS 189
Query: 186 IRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245
IRVN VAPW+I TP+++ + + ++ ++ R PM R GEP+EVSS+V +LCL S
Sbjct: 190 IRVNAVAPWIINTPIIEAACQVPSQKKNIESLIGRAPMKRAGEPSEVSSLVTYLCLPTAS 249
Query: 246 YVTGQVICVDGGYSVTGF 263
Y+TGQ+ICVDGGY+V GF
Sbjct: 250 YITGQIICVDGGYTVNGF 267
|
Datura stramonium (taxid: 4076) EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: - |
| >sp|P50162|TRN1_DATST Tropinone reductase 1 OS=Datura stramonium GN=TR1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 338 bits (866), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 156/258 (60%), Positives = 208/258 (80%), Gaps = 1/258 (0%)
Query: 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVS 65
E RWSLKG TALVTGG+KGIGYA+VEELA GA V+TCSRNE EL++ ++ W+ KGL V
Sbjct: 14 EGRWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVE 73
Query: 66 GSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFES 125
GSVCDL R +R+KLM+TV+ FDGKLNIL+NNAG I KE +FTE+D++ +M TNFE+
Sbjct: 74 GSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEA 133
Query: 126 AYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDK 185
AYHLSQ+A+PLLK++ NGN+IF+SS+AG A+P S+Y++SK A+NQ+TK+LACEWAKD
Sbjct: 134 AYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDN 193
Query: 186 IRVNTVAPWVIRTPLLDT-VEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244
IRVN+VAP VI TPL++T ++K+ + E + +++TPM R G+P EVS+++AFLC A
Sbjct: 194 IRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAA 253
Query: 245 SYVTGQVICVDGGYSVTG 262
SY+TGQ+I DGG++ G
Sbjct: 254 SYITGQIIWADGGFTANG 271
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Catalyzes the stereospecific reduction of tropinone to tropine. Datura stramonium (taxid: 4076) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 0 EC: 6 |
| >sp|Q9ASX2|TRNH1_ARATH Tropinone reductase homolog At1g07440 OS=Arabidopsis thaliana GN=At1g07440 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 335 bits (859), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 159/259 (61%), Positives = 198/259 (76%), Gaps = 4/259 (1%)
Query: 5 REQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQV 64
+ QRWSLK T LVTGGTKGIG+A+VEE A FGA++HTC+RNE ELN+ + +W+ KG QV
Sbjct: 6 QSQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQV 65
Query: 65 SGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFE 124
+GSVCD +R +REKLM+TVSS F GKL+ILINN G K T ++T EDFS ++TN E
Sbjct: 66 TGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLE 125
Query: 125 SAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKD 184
SAYHLSQLAHPLLK++G GNIIF+SS+AGV++ + SIY+++K A+NQL +NLACEWA D
Sbjct: 126 SAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASD 185
Query: 185 KIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244
IR N VAP VI TPL + V D E ++ R P+ R GEP EVSS+VAFLC+ A
Sbjct: 186 GIRANAVAPAVIATPLAEAVYDD----EFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAA 241
Query: 245 SYVTGQVICVDGGYSVTGF 263
SY+TGQ ICVDGG +V GF
Sbjct: 242 SYITGQTICVDGGLTVNGF 260
|
Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|P50163|TRN2_DATST Tropinone reductase 2 OS=Datura stramonium GN=TR2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 304 bits (779), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 140/250 (56%), Positives = 191/250 (76%)
Query: 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGS 67
RW+L+G TALVTGG++GIGY +VEELA+ GA V+TCSRN+ ELN + +W+SKG +V S
Sbjct: 4 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEAS 63
Query: 68 VCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAY 127
VCDL R++R++LM TV++ F GKLNIL+NNAG I KE ++T ED+S +M+ NFE+AY
Sbjct: 64 VCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAY 123
Query: 128 HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
HLS LAHP LK++ GN++FISSV+G +A+P ++Y ++K AM+QLT+ LA EWAKD IR
Sbjct: 124 HLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIR 183
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
VN V P VI T L++ +D E+ N+++ R + R GEP E++++VAFLC A SYV
Sbjct: 184 VNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYV 243
Query: 248 TGQVICVDGG 257
TGQ+I VDGG
Sbjct: 244 TGQIIYVDGG 253
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Catalyzes the stereospecific reduction of tropinone to pseudotropine. Datura stramonium (taxid: 4076) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 EC: 6 |
| >sp|P50164|TRN2_HYONI Tropinone reductase 2 OS=Hyoscyamus niger GN=TR2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 302 bits (773), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 139/255 (54%), Positives = 191/255 (74%)
Query: 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGS 67
RW+L+G TALVTGG++GIGY +VEELA GA V+TCSRN+ EL++ + +W+SKG V S
Sbjct: 4 RWNLEGCTALVTGGSRGIGYGIVEELANLGASVYTCSRNQKELDECLTQWRSKGFNVEAS 63
Query: 68 VCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAY 127
VCDL R++RE+ M+TVS+ F GKLNIL+NNAG I KE ++T ED+S +M+ NFE+AY
Sbjct: 64 VCDLSSRSEREEFMKTVSNHFHGKLNILVNNAGIVIYKEAKDYTMEDYSHIMSINFEAAY 123
Query: 128 HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
HLS LAHP LK++ GN++FISS++G A+P ++Y ++K AM+QLT+ LA EWAKD IR
Sbjct: 124 HLSVLAHPFLKASERGNVVFISSISGASALPYEAVYGATKGAMDQLTRCLAFEWAKDNIR 183
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
VN V P VI T +++ +D E+ ++++ R + R GEP E+++VVAFLC A SYV
Sbjct: 184 VNGVGPGVIATSMVEMTIQDPEQKENLDKLIDRCALRRMGEPKELAAVVAFLCFPAASYV 243
Query: 248 TGQVICVDGGYSVTG 262
TGQ+I VDGG+ G
Sbjct: 244 TGQIIYVDGGFMANG 258
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Catalyzes the stereospecific reduction of tropinone to pseudotropine. Hyoscyamus niger (taxid: 4079) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 EC: 6 |
| >sp|Q9X248|FABG_THEMA 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=fabG PE=3 SV=1 | Back alignment and function description |
|---|
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/251 (33%), Positives = 134/251 (53%), Gaps = 8/251 (3%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
L+G L+TG GIG A A GA V ++ L+ ++E + +V V +
Sbjct: 3 LEGKVCLITGAASGIGKATTLLFAQEGATVIAGDISKENLDSLVKEAEGLPGKVDPYVLN 62
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
+ R Q ++++E V ++ G++++L+NNAG EED+ V+ N + ++++
Sbjct: 63 VTDRDQIKEVVEKVVQKY-GRIDVLVNNAGITRDALLVRMKEEDWDAVINVNLKGVFNVT 121
Query: 131 QLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNT 190
Q+ P + NG+I+ +SSV G+ P + YA+SK + +TK A E A IRVN
Sbjct: 122 QMVVPYMIKQRNGSIVNVSSVVGIYGNPGQTNYAASKAGVIGMTKTWAKELAGRNIRVNA 181
Query: 191 VAPWVIRTPLLDTVEKDSNFLEHANRMVL-RTPMLRPGEPNEVSSVVAFLCLSATSYVTG 249
VAP I TP+ + + E A L R P+ R G+P EV+ V+ FL +SYVTG
Sbjct: 182 VAPGFIETPMTEKLP------EKARETALSRIPLGRFGKPEEVAQVILFLASDESSYVTG 235
Query: 250 QVICVDGGYSV 260
QVI +DGG +
Sbjct: 236 QVIGIDGGLVI 246
|
Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) (taxid: 243274) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 0 EC: 0 |
| >sp|P94681|TSAC_COMTE 4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2 OS=Comamonas testosteroni GN=tsaC1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 134 bits (337), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 127/252 (50%), Gaps = 2/252 (0%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
+L A+VTGG G G A+ L+ GA V N + E + G + G C
Sbjct: 2 NLNKQVAIVTGGASGFGAAIARRLSQAGAAVLVADLNAEGAQRMATELNAAGGRALGMAC 61
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAG-TFIPKETTEFTEEDFSTVMTTNFESAYH 128
D+ A +++ +Q G L+I++NNAG T K TE++F V N +S Y
Sbjct: 62 DVSKEADYRAVVDAAIAQL-GGLHIVVNNAGTTHRNKPALAVTEDEFDRVYRVNLKSVYW 120
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
+Q A P G+G ++ ++S GV P + Y+ SK AM LTK LA E+A+ +R+
Sbjct: 121 SAQCALPHFAQQGHGVMVNVASTTGVRPGPGLTWYSGSKAAMINLTKGLALEFARSGVRI 180
Query: 189 NTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248
N V P + TP++ + + R + R P+ R P++V+S VAFL S++T
Sbjct: 181 NAVNPMIGETPMMADFMGMEDTPANRERFLSRIPLGRFTRPDDVASAVAFLASDDASFLT 240
Query: 249 GQVICVDGGYSV 260
G + VDGG ++
Sbjct: 241 GVCLDVDGGRNI 252
|
Involved in the toluene-4-sulfonate degradation pathway. Does not discriminate between the sulfonate and the carboxyl substituents and can also be involved in the p-toluenecarboxylate degradation pathway. Comamonas testosteroni (taxid: 285) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 6 EC: 2 |
| >sp|P39640|BACC_BACSU Bacilysin biosynthesis oxidoreductase BacC OS=Bacillus subtilis (strain 168) GN=bacC PE=3 SV=2 | Back alignment and function description |
|---|
Score = 133 bits (335), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/253 (34%), Positives = 135/253 (53%), Gaps = 6/253 (2%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
+L T L+TGG GIGYA V+ A V +E + +++ + L +
Sbjct: 2 NLTDKTVLITGGASGIGYAAVQAFLGQQANVVVADIDEAQGEAMVRKENNDRLHFVQT-- 59
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
D+ A + +E+ F G L++LINNAG I E D++ V+ N + +
Sbjct: 60 DITDEAACQHAVESAVHTF-GGLDVLINNAGIEIVAPIHEMELSDWNKVLQVNLTGMFLM 118
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
S+ A + +AG GNII SV G++A P Y +SK + QLTK++A ++AK +IRVN
Sbjct: 119 SKHALKHMLAAGKGNIINTCSVGGLVAWPDIPAYNASKGGVLQLTKSMAVDYAKHQIRVN 178
Query: 190 TVAPWVIRTPLLDT--VEKDSNFLEHANRMVLR-TPMLRPGEPNEVSSVVAFLCLSATSY 246
V P +I TPL + +E + LE + + P+LR G+P E+++V+ FL +SY
Sbjct: 179 CVCPGIIDTPLNEKSFLENNEGTLEEIKKEKAKVNPLLRLGKPEEIANVMLFLASDLSSY 238
Query: 247 VTGQVICVDGGYS 259
+TG I DGGY+
Sbjct: 239 MTGSAITADGGYT 251
|
Part of the bacABCDE operon responsible for the biosynthesis of bacilysin. Bacillus subtilis (strain 168) (taxid: 224308) EC: 1 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q8SPU8|DHRS4_BOVIN Dehydrogenase/reductase SDR family member 4 OS=Bos taurus GN=DHRS4 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/253 (33%), Positives = 132/253 (52%), Gaps = 7/253 (2%)
Query: 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSG 66
+R L ALVT T GIG+A+ LA GA V SR + +++ + K +GL V+G
Sbjct: 27 RRNPLDNKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDRAVATLKGEGLSVTG 86
Query: 67 SVCDLKIRAQREKLMETVSSQFDGKLNILINNAGT--FIPKETTEFTEEDFSTVMTTNFE 124
+VC + RE+L+ T + + G ++ILI+NA F + EE + ++ N +
Sbjct: 87 TVCHVGKAEDRERLVAT-AVKLHGGVDILISNAAVSPFF-GSLMDVPEEVWDKILDVNVK 144
Query: 125 SAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKD 184
+ L++ P + G G+I+ +SS+A P Y SK A+ LTKNLA E A+
Sbjct: 145 ATALLTKAVVPEMAKRGGGSIVIVSSIAAYSPFPSLGPYNVSKTALLGLTKNLALELAES 204
Query: 185 KIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244
+RVN +AP +IRT + +D E + R G+P E + +V+FLC
Sbjct: 205 NVRVNCLAPGLIRTSFSRVLWEDPARQESIKATF---QIKRIGKPEECAGIVSFLCSEDA 261
Query: 245 SYVTGQVICVDGG 257
SY+TG+ + V GG
Sbjct: 262 SYITGETVVVAGG 274
|
Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones. Bos taurus (taxid: 9913) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 4 |
| >sp|P50199|GNO_GLUOX Gluconate 5-dehydrogenase OS=Gluconobacter oxydans (strain 621H) GN=gno PE=1 SV=1 | Back alignment and function description |
|---|
Score = 132 bits (332), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 140/255 (54%), Gaps = 8/255 (3%)
Query: 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSV 68
+SL G ALVTG ++GIG + + LA +GA V RN L+ ++++GL+ S +V
Sbjct: 7 FSLSGARALVTGASRGIGLTLAKGLARYGAEVVLNGRNAESLDSAQSGFEAEGLKASTAV 66
Query: 69 CDLKIRAQREKLMETVSS-QFD-GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESA 126
D+ ++ +++ V++ + D G ++ILINNAG EF+ +D+ +M+TN +
Sbjct: 67 FDVT---DQDAVIDGVAAIERDMGPIDILINNAGIQRRAPLEEFSRKDWDDLMSTNVNAV 123
Query: 127 YHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKI 186
+ + Q + G G I+ I SV +A P + Y ++K A+ LTK +A +W + +
Sbjct: 124 FFVGQAVARHMIPRGRGKIVNICSVQSELARPGIAPYTATKGAVKNLTKGMATDWGRHGL 183
Query: 187 RVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246
++N +AP T + + + D F + + RTP R G+ E+ FL A+S+
Sbjct: 184 QINGLAPGYFATEMTERLVADEEFTDW---LCKRTPAGRWGQVEELVGAAVFLSSRASSF 240
Query: 247 VTGQVICVDGGYSVT 261
V GQV+ VDGG +V+
Sbjct: 241 VNGQVLMVDGGITVS 255
|
Involved in the non-phosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate. Dependent on NADP, almost inactive with NAD. Gluconobacter oxydans (strain 621H) (taxid: 290633) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 6 EC: 9 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 263 | ||||||
| 225440460 | 267 | PREDICTED: tropinone reductase homolog [ | 0.984 | 0.970 | 0.691 | 1e-107 | |
| 225440458 | 325 | PREDICTED: tropinone reductase 1-like [V | 0.984 | 0.796 | 0.687 | 1e-103 | |
| 297740326 | 277 | unnamed protein product [Vitis vinifera] | 0.984 | 0.935 | 0.687 | 1e-103 | |
| 359482090 | 324 | PREDICTED: tropinone reductase homolog i | 0.984 | 0.799 | 0.664 | 1e-100 | |
| 147769646 | 270 | hypothetical protein VITISV_035429 [Viti | 0.969 | 0.944 | 0.658 | 1e-97 | |
| 297746010 | 270 | unnamed protein product [Vitis vinifera] | 0.969 | 0.944 | 0.662 | 2e-97 | |
| 225434831 | 270 | PREDICTED: tropinone reductase homolog A | 0.969 | 0.944 | 0.662 | 2e-97 | |
| 147838761 | 270 | hypothetical protein VITISV_016037 [Viti | 0.969 | 0.944 | 0.662 | 5e-97 | |
| 359478910 | 270 | PREDICTED: tropinone reductase homolog A | 0.969 | 0.944 | 0.651 | 2e-96 | |
| 224125342 | 260 | predicted protein [Populus trichocarpa] | 0.969 | 0.980 | 0.652 | 3e-96 |
| >gi|225440460|ref|XP_002271837.1| PREDICTED: tropinone reductase homolog [Vitis vinifera] gi|297740324|emb|CBI30506.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 179/259 (69%), Positives = 220/259 (84%)
Query: 5 REQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQV 64
R +RWSL+GMTALVTGG++GIG+A+VEELAAFGA VHTCSRN+ EL+QR+QEWK+KG +V
Sbjct: 9 RNRRWSLEGMTALVTGGSRGIGHAIVEELAAFGATVHTCSRNQEELDQRLQEWKNKGFKV 68
Query: 65 SGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFE 124
S S+CD+ R+QR +LMETVSS FDGKL+IL+NNAGT I KE TE T EDFST+M TNFE
Sbjct: 69 SASLCDVSSRSQRTQLMETVSSIFDGKLSILVNNAGTIILKEATECTAEDFSTIMGTNFE 128
Query: 125 SAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKD 184
SAYHL QL HPLLK++GNG+I+FISS++G++A P SIYA+SK AMNQ+TKNLACEWAKD
Sbjct: 129 SAYHLCQLGHPLLKASGNGSIVFISSISGLLAFPASSIYAASKGAMNQVTKNLACEWAKD 188
Query: 185 KIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244
IRVNT+APW+I+T LL ++ N E+ +R++ RTP+ RPGEP+EVS +VAFLC
Sbjct: 189 GIRVNTIAPWIIKTSLLHVIDDHPNIKENMSRLISRTPISRPGEPDEVSPLVAFLCFPVA 248
Query: 245 SYVTGQVICVDGGYSVTGF 263
SY+TGQVICVDGGY VTGF
Sbjct: 249 SYITGQVICVDGGYKVTGF 267
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225440458|ref|XP_002271432.1| PREDICTED: tropinone reductase 1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/259 (68%), Positives = 215/259 (83%)
Query: 5 REQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQV 64
R RWSL+G TALVTGGT+GIG+A+VEELAAFGA VHTCSRN+ EL++ +Q WKSKG +V
Sbjct: 11 RNSRWSLQGTTALVTGGTRGIGHAIVEELAAFGATVHTCSRNQKELDEMLQVWKSKGFKV 70
Query: 65 SGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFE 124
SGSVCD+ R QR +LM+TVSS FDGKLNIL+NNAGT I K T E+T ED S +M TNFE
Sbjct: 71 SGSVCDVSSRPQRTQLMDTVSSLFDGKLNILVNNAGTVISKRTEEYTVEDVSIIMGTNFE 130
Query: 125 SAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKD 184
SAYHLSQL +PLLK++G G+I+FISSVAGV+A+P+ SIYA+SK AMNQ+T+NLACEWA+D
Sbjct: 131 SAYHLSQLGYPLLKASGRGSIVFISSVAGVMALPVISIYAASKGAMNQVTRNLACEWAED 190
Query: 185 KIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244
IRVNT+APWVI T L+ + D + E R++ RTP+ R GEP+EVSS+VAFLC A
Sbjct: 191 NIRVNTIAPWVINTSLIHKAKDDPSSEEKIKRIISRTPICRMGEPDEVSSLVAFLCFPAA 250
Query: 245 SYVTGQVICVDGGYSVTGF 263
SY+TGQVICVDGGYSVTGF
Sbjct: 251 SYITGQVICVDGGYSVTGF 269
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297740326|emb|CBI30508.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/259 (68%), Positives = 215/259 (83%)
Query: 5 REQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQV 64
R RWSL+G TALVTGGT+GIG+A+VEELAAFGA VHTCSRN+ EL++ +Q WKSKG +V
Sbjct: 4 RNSRWSLQGTTALVTGGTRGIGHAIVEELAAFGATVHTCSRNQKELDEMLQVWKSKGFKV 63
Query: 65 SGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFE 124
SGSVCD+ R QR +LM+TVSS FDGKLNIL+NNAGT I K T E+T ED S +M TNFE
Sbjct: 64 SGSVCDVSSRPQRTQLMDTVSSLFDGKLNILVNNAGTVISKRTEEYTVEDVSIIMGTNFE 123
Query: 125 SAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKD 184
SAYHLSQL +PLLK++G G+I+FISSVAGV+A+P+ SIYA+SK AMNQ+T+NLACEWA+D
Sbjct: 124 SAYHLSQLGYPLLKASGRGSIVFISSVAGVMALPVISIYAASKGAMNQVTRNLACEWAED 183
Query: 185 KIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244
IRVNT+APWVI T L+ + D + E R++ RTP+ R GEP+EVSS+VAFLC A
Sbjct: 184 NIRVNTIAPWVINTSLIHKAKDDPSSEEKIKRIISRTPICRMGEPDEVSSLVAFLCFPAA 243
Query: 245 SYVTGQVICVDGGYSVTGF 263
SY+TGQVICVDGGYSVTGF
Sbjct: 244 SYITGQVICVDGGYSVTGF 262
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359482090|ref|XP_002271363.2| PREDICTED: tropinone reductase homolog isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 172/259 (66%), Positives = 210/259 (81%)
Query: 5 REQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQV 64
R +RWSLKGMTAL+TGGT+GIGYA+VEELA GAIVHTCSRN+TELN+R+QEW+ KG +V
Sbjct: 66 RAKRWSLKGMTALITGGTRGIGYAIVEELAELGAIVHTCSRNQTELNERLQEWEGKGFRV 125
Query: 65 SGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFE 124
SGSVCDL RAQREKL ETVSS F+GKLNIL+NNA T K T +T ED S+++ TNFE
Sbjct: 126 SGSVCDLTSRAQREKLTETVSSLFEGKLNILVNNAATVALKAPTNYTAEDCSSILQTNFE 185
Query: 125 SAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKD 184
S YHL QLAHPLLK++G G+IIFISSVAG+I++P S+YA++K A+NQ+TKNLACEWAKD
Sbjct: 186 SPYHLCQLAHPLLKASGRGSIIFISSVAGLISLPHMSVYAATKGAINQVTKNLACEWAKD 245
Query: 185 KIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244
IR N VAPW +RT + +E D+ +++ RTP+ R EP+EVS +VAFLCL A
Sbjct: 246 NIRTNAVAPWTVRTSVRPILEPDNPMATAYPQLLARTPLHRIAEPDEVSPLVAFLCLPAA 305
Query: 245 SYVTGQVICVDGGYSVTGF 263
SY+TGQVICVDGG+SV GF
Sbjct: 306 SYITGQVICVDGGFSVNGF 324
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147769646|emb|CAN63543.1| hypothetical protein VITISV_035429 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 362 bits (928), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 170/258 (65%), Positives = 208/258 (80%), Gaps = 3/258 (1%)
Query: 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVS 65
+ RWSLKGMTALVTGGTKGIG+A+VEELA GA +HTCSR ETELN+ +++WK+KG VS
Sbjct: 11 DSRWSLKGMTALVTGGTKGIGHAIVEELAGLGAAIHTCSRKETELNECLKDWKAKGFGVS 70
Query: 66 GSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFES 125
GSVCD+ RAQREKLMETVSS F+GKLNIL+NNA I K T E T E+FST+M NFES
Sbjct: 71 GSVCDVSSRAQREKLMETVSSVFNGKLNILVNNAAIVIQKPTVEVTAEEFSTIMAINFES 130
Query: 126 AYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDK 185
YHLSQLAHPLLK++G G+I+FISSVAGV+++ S Y+++K AMNQLTKNLACEWA+D
Sbjct: 131 VYHLSQLAHPLLKASGAGSIVFISSVAGVVSLKYLSAYSATKGAMNQLTKNLACEWAEDN 190
Query: 186 IRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245
IR N VAPW I+TP++D + + FLE ++ R P+ R G+P EVSS+VAFLCL A+S
Sbjct: 191 IRSNAVAPWYIKTPMVDQMLSNKTFLE---XVINRAPLRRVGDPKEVSSLVAFLCLPASS 247
Query: 246 YVTGQVICVDGGYSVTGF 263
Y+TGQ ICVDGG +V GF
Sbjct: 248 YITGQTICVDGGVTVNGF 265
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297746010|emb|CBI16066.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 171/258 (66%), Positives = 206/258 (79%), Gaps = 3/258 (1%)
Query: 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVS 65
+ RWSLKGMTALVTGGTKGIG+A+VEELA GA +HTCSR ETELN+ +++WK+KG VS
Sbjct: 11 DSRWSLKGMTALVTGGTKGIGHAIVEELAGLGATIHTCSRKETELNECLKDWKAKGFGVS 70
Query: 66 GSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFES 125
GSVCD+ RAQREKLMETVSS F GKLNIL+NNA I K T E T E+FST+M NFES
Sbjct: 71 GSVCDVSSRAQREKLMETVSSVFKGKLNILVNNAAIVIQKPTVEVTAEEFSTIMAINFES 130
Query: 126 AYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDK 185
YHLSQLAHPLLK++G G+I+FISSVAGV+++ S YA +K AMNQLTKNLACEWA+D
Sbjct: 131 VYHLSQLAHPLLKASGAGSIVFISSVAGVVSVKYLSAYAVTKGAMNQLTKNLACEWAEDN 190
Query: 186 IRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245
IR N VAPW I+TP++D + + FLE ++ R P+ R G+P EVSS+VAFLCL A+S
Sbjct: 191 IRSNAVAPWCIKTPMVDQMLSNKTFLEG---VINRAPLRRVGDPKEVSSLVAFLCLPASS 247
Query: 246 YVTGQVICVDGGYSVTGF 263
Y+TGQ ICVDGG +V GF
Sbjct: 248 YITGQTICVDGGVTVNGF 265
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225434831|ref|XP_002282554.1| PREDICTED: tropinone reductase homolog At1g07440 [Vitis vinifera] gi|297746017|emb|CBI16073.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 361 bits (926), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 171/258 (66%), Positives = 206/258 (79%), Gaps = 3/258 (1%)
Query: 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVS 65
+ RWSLKGMTALVTGGTKGIG+A+VEELA GA +HTCSR ETELN+ +++WK+KG VS
Sbjct: 11 DSRWSLKGMTALVTGGTKGIGHAIVEELAGLGATIHTCSRKETELNECLKDWKAKGFGVS 70
Query: 66 GSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFES 125
GSVCD+ RAQREKLMETVSS F GKLNIL+NNA I K T E T E+FST+M NFES
Sbjct: 71 GSVCDVSSRAQREKLMETVSSVFKGKLNILVNNAAIVIQKPTVEVTAEEFSTIMAINFES 130
Query: 126 AYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDK 185
YHLSQLAHPLLK++G G+I+FISSVAGV++I S Y+ +K AMNQLTKNLACEWA+D
Sbjct: 131 VYHLSQLAHPLLKASGAGSIVFISSVAGVVSIKYLSAYSVTKGAMNQLTKNLACEWAEDN 190
Query: 186 IRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245
IR N VAPW I+TP++D + + FLE ++ R P+ R G+P EVSS+VAFLCL A+S
Sbjct: 191 IRSNAVAPWYIKTPMVDQMFSNKTFLEE---VINRAPLRRVGDPKEVSSLVAFLCLPASS 247
Query: 246 YVTGQVICVDGGYSVTGF 263
Y+TGQ ICVDGG +V GF
Sbjct: 248 YITGQTICVDGGVTVNGF 265
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147838761|emb|CAN69507.1| hypothetical protein VITISV_016037 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 359 bits (922), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 171/258 (66%), Positives = 205/258 (79%), Gaps = 3/258 (1%)
Query: 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVS 65
+ RWSLKGMTALVTGGTKGIG+A+VEELA GA +HTCSR ETELN+ +++WK+KG VS
Sbjct: 11 DSRWSLKGMTALVTGGTKGIGHAIVEELAGLGATIHTCSRKETELNECLKDWKAKGFGVS 70
Query: 66 GSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFES 125
GSVCD+ RAQREKLMETVSS F GKLNIL+NNA I K T E T E+FST+M NFES
Sbjct: 71 GSVCDVSSRAQREKLMETVSSVFKGKLNILVNNAAIVIQKPTVEVTAEEFSTIMAINFES 130
Query: 126 AYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDK 185
YHLSQLAHPLLK++G G+I+FISSVAGV +I S Y+ +K AMNQLTKNLACEWA+D
Sbjct: 131 VYHLSQLAHPLLKASGAGSIVFISSVAGVASIKYLSAYSVTKGAMNQLTKNLACEWAEDN 190
Query: 186 IRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245
IR N VAPW I+TP++D + + FLE ++ R P+ R G+P EVSS+VAFLCL A+S
Sbjct: 191 IRSNAVAPWYIKTPMVDQMLSNKTFLEE---VINRAPLRRVGDPKEVSSLVAFLCLPASS 247
Query: 246 YVTGQVICVDGGYSVTGF 263
Y+TGQ ICVDGG +V GF
Sbjct: 248 YITGQTICVDGGVTVNGF 265
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359478910|ref|XP_003632186.1| PREDICTED: tropinone reductase homolog At1g07440-like [Vitis vinifera] gi|297746015|emb|CBI16071.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 358 bits (918), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 168/258 (65%), Positives = 208/258 (80%), Gaps = 3/258 (1%)
Query: 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVS 65
+ RWSLKGMTALVTGGTKGIG+A+VEELA GA +HTCSR ETELN+ +++WK+KG VS
Sbjct: 11 DSRWSLKGMTALVTGGTKGIGHAIVEELAGLGATIHTCSRKETELNECLKDWKAKGFGVS 70
Query: 66 GSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFES 125
GSVCD+ RAQREKLM+T+SS F+GKLNILINNA I K T E T E+FST+M TNFES
Sbjct: 71 GSVCDVSSRAQREKLMQTISSVFNGKLNILINNAAISIQKPTIEVTAEEFSTIMATNFES 130
Query: 126 AYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDK 185
YHLSQ+AHPLLK++G G+I+FISSV+G++A S Y+ +K AMNQLTKNLACEWAKD
Sbjct: 131 VYHLSQIAHPLLKASGAGSIVFISSVSGIVAHKNISAYSVTKGAMNQLTKNLACEWAKDN 190
Query: 186 IRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245
IR N VAPW I+TP+++ + + FLE ++ R P+ R G+P EVSS+VAFLCL A+S
Sbjct: 191 IRSNAVAPWYIKTPMVEQMLTNQAFLE---EVINRAPLRRVGDPKEVSSLVAFLCLPASS 247
Query: 246 YVTGQVICVDGGYSVTGF 263
Y+TGQ+ICVDGG +V GF
Sbjct: 248 YITGQIICVDGGMTVNGF 265
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224125342|ref|XP_002319562.1| predicted protein [Populus trichocarpa] gi|222857938|gb|EEE95485.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 357 bits (915), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 169/259 (65%), Positives = 208/259 (80%), Gaps = 4/259 (1%)
Query: 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVS 65
E+RWSL+GMTALVTGGTKGIGYAVV+ELAA GAIVHTC+RN+ +LN+RI+EW KG +V+
Sbjct: 2 EKRWSLQGMTALVTGGTKGIGYAVVDELAALGAIVHTCARNQDQLNERIREWNEKGFKVT 61
Query: 66 GSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFES 125
GSVCD+ A+REKLME VSS+FDGKLNIL+NNAGT I K T ++T EDF+++M TN +S
Sbjct: 62 GSVCDVSSDAEREKLMEEVSSRFDGKLNILVNNAGTNIYKATLDYTAEDFTSLMNTNLQS 121
Query: 126 AYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI-PMCSIYASSKVAMNQLTKNLACEWAKD 184
A+HLSQLAHPLLK++G G I+F+SS+ V+++ P +Y++SK AMNQLT+NLACEWAKD
Sbjct: 122 AFHLSQLAHPLLKASGAGKIVFMSSIGSVVSVNPQYPLYSASKGAMNQLTRNLACEWAKD 181
Query: 185 KIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244
IRVN VAPW +RTPL D + A + RTPM R GEP EVSSVVAFLCL A
Sbjct: 182 NIRVNGVAPWFVRTPLTAHSLDDESI---AKEVFSRTPMRRVGEPGEVSSVVAFLCLPAP 238
Query: 245 SYVTGQVICVDGGYSVTGF 263
++TGQ+ICVDGG SV GF
Sbjct: 239 GFLTGQIICVDGGMSVNGF 257
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 263 | ||||||
| TAIR|locus:2152815 | 264 | AT5G06060 [Arabidopsis thalian | 0.969 | 0.965 | 0.608 | 2.9e-80 | |
| TAIR|locus:2043052 | 262 | AT2G29290 [Arabidopsis thalian | 0.969 | 0.973 | 0.581 | 6.8e-79 | |
| TAIR|locus:2043037 | 268 | AT2G29150 [Arabidopsis thalian | 0.965 | 0.947 | 0.604 | 2.3e-78 | |
| TAIR|locus:2025072 | 266 | AT1G07440 [Arabidopsis thalian | 0.969 | 0.958 | 0.590 | 4.8e-78 | |
| TAIR|locus:2043167 | 271 | AT2G29360 [Arabidopsis thalian | 0.961 | 0.933 | 0.605 | 3.4e-77 | |
| TAIR|locus:2042982 | 307 | AT2G29340 [Arabidopsis thalian | 0.969 | 0.830 | 0.589 | 4.3e-77 | |
| TAIR|locus:2043177 | 269 | SAG13 "senescence-associated g | 0.958 | 0.936 | 0.609 | 5.5e-77 | |
| TAIR|locus:2043087 | 322 | AT2G29260 [Arabidopsis thalian | 0.969 | 0.791 | 0.554 | 3.5e-75 | |
| TAIR|locus:2043027 | 262 | AT2G29310 [Arabidopsis thalian | 0.969 | 0.973 | 0.562 | 7.3e-75 | |
| TAIR|locus:2043152 | 268 | AT2G29370 [Arabidopsis thalian | 0.961 | 0.944 | 0.570 | 9.3e-75 |
| TAIR|locus:2152815 AT5G06060 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 806 (288.8 bits), Expect = 2.9e-80, P = 2.9e-80
Identities = 157/258 (60%), Positives = 196/258 (75%)
Query: 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVS 65
++RWSL G TALVTGGT+GIG AVVEELA FGA VHTCSRN+ ELN + +WK+ GL VS
Sbjct: 4 DKRWSLAGKTALVTGGTRGIGRAVVEELAKFGAKVHTCSRNQEELNACLNDWKANGLVVS 63
Query: 66 GSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKXXXXXXXXXXXXVMTTNFES 125
GSVCD +R QREKL++ SS F GKLNILINN GT + K +M+TN ES
Sbjct: 64 GSVCDASVRDQREKLIQEASSAFSGKLNILINNVGTNVRKPTVEYSSEEYAKIMSTNLES 123
Query: 126 AYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDK 185
A+HLSQ+AHPLLK++G G+I+FISSVAG++ + SIY ++K A+NQLT+NLACEWA D
Sbjct: 124 AFHLSQIAHPLLKASGVGSIVFISSVAGLVHLSSGSIYGATKGALNQLTRNLACEWASDN 183
Query: 186 IRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245
IR N VAPW I+T L++T+ + F+E +V RTP+ R GEP EVSS+VAFLCL A+S
Sbjct: 184 IRTNCVAPWYIKTSLVETLLEKKEFVE---AVVSRTPLGRVGEPEEVSSLVAFLCLPASS 240
Query: 246 YVTGQVICVDGGYSVTGF 263
Y+TGQVI VDGG++V GF
Sbjct: 241 YITGQVISVDGGFTVNGF 258
|
|
| TAIR|locus:2043052 AT2G29290 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 793 (284.2 bits), Expect = 6.8e-79, P = 6.8e-79
Identities = 150/258 (58%), Positives = 192/258 (74%)
Query: 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVS 65
++RWSL+GM ALVTGGTKGIG AVVEEL+ GA VHTC+R+ET+L +R++EW+ KG QV+
Sbjct: 2 DKRWSLQGMNALVTGGTKGIGEAVVEELSILGARVHTCARDETQLQERLREWQEKGFQVT 61
Query: 66 GSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKXXXXXXXXXXXXVMTTNFES 125
S+CD+ +R QREKLMETVSS F GKLNIL+NN GT + K +M TN +S
Sbjct: 62 TSICDVSLREQREKLMETVSSLFQGKLNILVNNVGTLMLKPTTEYTAEEFSFLMATNLDS 121
Query: 126 AYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDK 185
A+H+SQLAHPLLK++G+G+I+ +SS+AGV+ + + SIY ++K AMNQL +NLACEWA D
Sbjct: 122 AFHISQLAHPLLKASGSGSIVLMSSIAGVVHVGVGSIYGATKGAMNQLARNLACEWASDN 181
Query: 186 IRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245
IR N + PW+I TPL+ + + A RTPM R GE NEVS +VAFLCL A S
Sbjct: 182 IRTNAICPWLITTPLISDLLSVEEMKKEAEE---RTPMGRVGEANEVSPLVAFLCLPAAS 238
Query: 246 YVTGQVICVDGGYSVTGF 263
Y+TGQVICVDGG +V GF
Sbjct: 239 YITGQVICVDGGLTVNGF 256
|
|
| TAIR|locus:2043037 AT2G29150 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 788 (282.4 bits), Expect = 2.3e-78, P = 2.3e-78
Identities = 156/258 (60%), Positives = 192/258 (74%)
Query: 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVS 65
+ RWSL+GMTALVTGG+KG+G AVVEELA GA VHTC+R+ET+L +R++EW++KG +V+
Sbjct: 11 KSRWSLEGMTALVTGGSKGLGEAVVEELAMLGARVHTCARDETQLQERLREWQAKGFEVT 70
Query: 66 GSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKXXXXXXXXXXXXVMTTNFES 125
SVCD+ R QREKLMETVSS F GKLNIL+NNAGT I K +M TN ES
Sbjct: 71 TSVCDVSSREQREKLMETVSSVFQGKLNILVNNAGTGIIKPSTEYTAEDYSFLMATNLES 130
Query: 126 AYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDK 185
A+HLSQ+AHPLLK++G+G+I+F+SSVAG++ SIY +SK AMNQL ++LACEWA D
Sbjct: 131 AFHLSQIAHPLLKASGSGSIVFMSSVAGLVHTG-ASIYGASKGAMNQLGRSLACEWASDN 189
Query: 186 IRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245
IRVN+V PWVI TPL + D + +TPM R GE NEVSS+VAFLC A S
Sbjct: 190 IRVNSVCPWVITTPLTSFIFSDEKLRKAVED---KTPMGRVGEANEVSSLVAFLCFPAAS 246
Query: 246 YVTGQVICVDGGYSVTGF 263
Y+TGQ ICVDGG SV GF
Sbjct: 247 YITGQTICVDGGASVNGF 264
|
|
| TAIR|locus:2025072 AT1G07440 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 153/259 (59%), Positives = 190/259 (73%)
Query: 5 REQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQV 64
+ QRWSLK T LVTGGTKGIG+A+VEE A FGA++HTC+RNE ELN+ + +W+ KG QV
Sbjct: 6 QSQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQV 65
Query: 65 SGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKXXXXXXXXXXXXVMTTNFE 124
+GSVCD +R +REKLM+TVSS F GKL+ILINN G K ++TN E
Sbjct: 66 TGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLE 125
Query: 125 SAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKD 184
SAYHLSQLAHPLLK++G GNIIF+SS+AGV++ + SIY+++K A+NQL +NLACEWA D
Sbjct: 126 SAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASD 185
Query: 185 KIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244
IR N VAP VI TPL + V D E ++ R P+ R GEP EVSS+VAFLC+ A
Sbjct: 186 GIRANAVAPAVIATPLAEAVYDD----EFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAA 241
Query: 245 SYVTGQVICVDGGYSVTGF 263
SY+TGQ ICVDGG +V GF
Sbjct: 242 SYITGQTICVDGGLTVNGF 260
|
|
| TAIR|locus:2043167 AT2G29360 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 777 (278.6 bits), Expect = 3.4e-77, P = 3.4e-77
Identities = 155/256 (60%), Positives = 189/256 (73%)
Query: 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGS 67
RWSL GMTALVTGG+KGIG AVVEELA GA +HTC+R+ET+L + +++W++KG QV+ S
Sbjct: 13 RWSLVGMTALVTGGSKGIGEAVVEELATLGARIHTCARDETQLQESLRKWQAKGFQVTTS 72
Query: 68 VCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKXXXXXXXXXXXXVMTTNFESAY 127
VCD+ R +REKLMETVS+ F+GKLNIL+NN GT I K M TN ESA+
Sbjct: 73 VCDVSSRDKREKLMETVSTIFEGKLNILVNNVGTCIVKPTLQHTAEDFSFTMATNLESAF 132
Query: 128 HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
HLSQLAHPLLK++G+G+I+ ISSV+GV+ + SIY SK AMNQL +NLACEWA D IR
Sbjct: 133 HLSQLAHPLLKASGSGSIVLISSVSGVVHVNGASIYGVSKGAMNQLGRNLACEWASDNIR 192
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
N+V PW I TPL+ E SN E + R PM R GE NEVSS+VAFLCL A SY+
Sbjct: 193 TNSVCPWFIETPLV--TESLSNE-EFRKEVESRPPMGRVGEVNEVSSLVAFLCLPAASYI 249
Query: 248 TGQVICVDGGYSVTGF 263
TGQ ICVDGG++V GF
Sbjct: 250 TGQTICVDGGFTVNGF 265
|
|
| TAIR|locus:2042982 AT2G29340 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 776 (278.2 bits), Expect = 4.3e-77, P = 4.3e-77
Identities = 152/258 (58%), Positives = 190/258 (73%)
Query: 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVS 65
++RWSLKGMTALVTGG GIGYA+VEELA FGA +H C +E +LNQ + EW+ KG QVS
Sbjct: 2 DKRWSLKGMTALVTGGASGIGYAIVEELAGFGARIHVCDISEAKLNQSLSEWEKKGFQVS 61
Query: 66 GSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKXXXXXXXXXXXXVMTTNFES 125
GSVCD+ R +RE+LM+TVSSQFDGKLNIL++N G K +++N E+
Sbjct: 62 GSVCDVASRPEREELMQTVSSQFDGKLNILVSNVGVIRSKPTTEYTEDDFAFHISSNVEA 121
Query: 126 AYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDK 185
AYH SQL+HPLLK++G G+IIF+SS+AGVI+ SIY +K A+ QL KNLACEWAKD
Sbjct: 122 AYHFSQLSHPLLKASGYGSIIFVSSIAGVISFDAGSIYGLTKGALIQLAKNLACEWAKDG 181
Query: 186 IRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245
IR N VAP VI TPL + +D +F + ++ RTP+ R GEPNEV+S+VAFLCL A S
Sbjct: 182 IRANAVAPNVINTPLSQSYLEDVSFKK---ALLSRTPLGRVGEPNEVASLVAFLCLPAAS 238
Query: 246 YVTGQVICVDGGYSVTGF 263
Y+TGQ ICVDGG +V GF
Sbjct: 239 YITGQTICVDGGLTVNGF 256
|
|
| TAIR|locus:2043177 SAG13 "senescence-associated gene 13" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
Identities = 156/256 (60%), Positives = 188/256 (73%)
Query: 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGS 67
RWSL GMTALVTGG+KGIG AVVEELA GA VHTC+R+ET+L +R++EW++KG QV+ S
Sbjct: 12 RWSLGGMTALVTGGSKGIGEAVVEELAMLGAKVHTCARDETQLQERLREWQAKGFQVTTS 71
Query: 68 VCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKXXXXXXXXXXXXVMTTNFESAY 127
VCD+ R QR KLMETVSS + GKLNIL+NN GT I K VM TN ESA+
Sbjct: 72 VCDVSSRDQRVKLMETVSSLYQGKLNILVNNVGTSIFKPTTEYTAEDFSFVMATNLESAF 131
Query: 128 HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
HLSQLAHPLLK++G+G+I+ ISS AGV+ + + SIY ++K AMNQL +NLACEWA D IR
Sbjct: 132 HLSQLAHPLLKASGSGSIVLISSAAGVVHVNVGSIYGATKGAMNQLARNLACEWASDNIR 191
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
N+V PW I TPL + D F + A R TPM R GE NEVS +VAFLCL + SY+
Sbjct: 192 TNSVCPWYITTPLSNDFF-DEEFKKEAVRT---TPMGRVGEANEVSPLVAFLCLPSASYI 247
Query: 248 TGQVICVDGGYSVTGF 263
TGQ ICVDGG +V GF
Sbjct: 248 TGQTICVDGGATVNGF 263
|
|
| TAIR|locus:2043087 AT2G29260 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 758 (271.9 bits), Expect = 3.5e-75, P = 3.5e-75
Identities = 143/258 (55%), Positives = 191/258 (74%)
Query: 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVS 65
++RWSL GM+ALVTGGT+GIG A+VEELA GA VHTC+RNE EL + +W G +V+
Sbjct: 63 KERWSLNGMSALVTGGTRGIGRAIVEELAGLGAEVHTCARNEYELENCLSDWNRSGFRVA 122
Query: 66 GSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKXXXXXXXXXXXXVMTTNFES 125
GSVCD+ R+QRE LMETVSS F+GKL+IL+NN GT I K +M+TNFES
Sbjct: 123 GSVCDVSDRSQREALMETVSSVFEGKLHILVNNVGTNIRKPMVEFTAGEFSTLMSTNFES 182
Query: 126 AYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDK 185
+HL QLA+PLL+ + G+++FISSV+G +++ S+ +S+K A+NQLT++LACEWAKD
Sbjct: 183 VFHLCQLAYPLLRESKAGSVVFISSVSGFVSLKNMSVQSSTKGAINQLTRSLACEWAKDN 242
Query: 186 IRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245
IR+N VAPW I+T +++ V + +LE + TP+ R GEP EVSS VAFLCL A+S
Sbjct: 243 IRINAVAPWYIKTSMVEQVLSNKEYLEEVYSV---TPLGRLGEPREVSSAVAFLCLPASS 299
Query: 246 YVTGQVICVDGGYSVTGF 263
Y+TGQ++CVDGG S+ GF
Sbjct: 300 YITGQILCVDGGMSINGF 317
|
|
| TAIR|locus:2043027 AT2G29310 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 755 (270.8 bits), Expect = 7.3e-75, P = 7.3e-75
Identities = 145/258 (56%), Positives = 187/258 (72%)
Query: 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVS 65
++RWSL+GMTALVTG GIGYA+VEELA+FGAI+H C +ET L+Q + EW+ KG QVS
Sbjct: 2 DKRWSLQGMTALVTGAASGIGYAIVEELASFGAIIHICDISETLLSQSLSEWEKKGFQVS 61
Query: 66 GSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKXXXXXXXXXXXXVMTTNFES 125
GS+CD+ R REKLM+TVSS FDGKLNIL+NN G K ++TN E
Sbjct: 62 GSICDVASRPDREKLMQTVSSLFDGKLNILVNNVGVIRGKPTTEYVAEDFSYHISTNLEP 121
Query: 126 AYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDK 185
A+H SQL+H LLK++G G+I+F+SS GV+++ SIY+ +K A+NQLT+NLACEWAKD
Sbjct: 122 AFHFSQLSHLLLKASGFGSIVFMSSATGVVSVQCGSIYSLTKGALNQLTRNLACEWAKDG 181
Query: 186 IRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245
IR N VAP V++TPL + +D F E + RTP+ R GEPNEV+S+V FLCL A S
Sbjct: 182 IRANAVAPNVVKTPLSQSYLEDVGFKE---ALFSRTPLGRAGEPNEVASLVVFLCLPAAS 238
Query: 246 YVTGQVICVDGGYSVTGF 263
Y+TGQ IC+DGG++V F
Sbjct: 239 YITGQTICIDGGFTVNAF 256
|
|
| TAIR|locus:2043152 AT2G29370 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 754 (270.5 bits), Expect = 9.3e-75, P = 9.3e-75
Identities = 146/256 (57%), Positives = 185/256 (72%)
Query: 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGS 67
+WSL+GMTALVTGG+KG+G AVVEELA GA VHTC+R+ET+L + ++EW++KGLQV+ S
Sbjct: 13 KWSLEGMTALVTGGSKGLGKAVVEELAMLGARVHTCARDETQLQESLREWQAKGLQVTTS 72
Query: 68 VCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKXXXXXXXXXXXXVMTTNFESAY 127
VCD+ R QREKLMETVSS F GKL+IL+ N G + K ++ TN ES +
Sbjct: 73 VCDVSSRDQREKLMETVSSLFQGKLSILVPNVGIGVLKPTTECTAEEFSFIIATNLESTF 132
Query: 128 HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
H SQLAHPLLK++G+GNI+ +SSVAGV+ + SIY ++K AMNQL +NLACEWA D IR
Sbjct: 133 HFSQLAHPLLKASGSGNIVLMSSVAGVVNLGNTSIYGATKGAMNQLARNLACEWASDNIR 192
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
N+V PW I TP D + E + TP+ R GE NEVSS+VAFLCL A SY+
Sbjct: 193 ANSVCPWFITTPSTKDFLGDKDVKEKVESV---TPLRRVGEANEVSSLVAFLCLPAASYI 249
Query: 248 TGQVICVDGGYSVTGF 263
TGQ ICVDGG+++ GF
Sbjct: 250 TGQTICVDGGFTINGF 265
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q8WNV7 | DHRS4_PIG | 1, ., 1, ., 1, ., 1, 8, 4 | 0.3255 | 0.9239 | 0.8709 | yes | no |
| P0A0H9 | FABG_STAAM | 1, ., 1, ., 1, ., 1, 0, 0 | 0.3172 | 0.8821 | 0.9430 | yes | no |
| P66781 | Y1350_MYCTU | 1, ., -, ., -, ., - | 0.3055 | 0.8935 | 0.9514 | yes | no |
| Q05528 | KDUD_DICD3 | 1, ., 1, ., 1, ., 1, 2, 7 | 0.3188 | 0.9163 | 0.9525 | yes | no |
| Q6GHK4 | FABG_STAAR | 1, ., 1, ., 1, ., 1, 0, 0 | 0.3172 | 0.8821 | 0.9430 | yes | no |
| Q5HGK2 | FABG_STAAC | 1, ., 1, ., 1, ., 1, 0, 0 | 0.3172 | 0.8821 | 0.9430 | yes | no |
| P99093 | FABG_STAAN | 1, ., 1, ., 1, ., 1, 0, 0 | 0.3172 | 0.8821 | 0.9430 | yes | no |
| Q9KQH7 | FABG_VIBCH | 1, ., 1, ., 1, ., 1, 0, 0 | 0.3185 | 0.9087 | 0.9795 | yes | no |
| Q49117 | Y182_METEA | 1, ., -, ., -, ., - | 0.3266 | 0.9201 | 0.9758 | yes | no |
| Q9GKX2 | DHRS4_RABIT | 1, ., 1, ., 1, ., 1, 8, 4 | 0.3162 | 0.9353 | 0.9461 | yes | no |
| P50162 | TRN1_DATST | 1, ., 1, ., 1, ., 2, 0, 6 | 0.6046 | 0.9771 | 0.9413 | N/A | no |
| P50163 | TRN2_DATST | 1, ., 1, ., 1, ., 2, 3, 6 | 0.56 | 0.9505 | 0.9615 | N/A | no |
| P50164 | TRN2_HYONI | 1, ., 1, ., 1, ., 2, 3, 6 | 0.5450 | 0.9695 | 0.9807 | N/A | no |
| P50165 | TRNH_DATST | 1, ., 1, ., 1, ., - | 0.6162 | 0.9809 | 0.9626 | N/A | no |
| P0A0I0 | FABG_STAAW | 1, ., 1, ., 1, ., 1, 0, 0 | 0.3172 | 0.8821 | 0.9430 | yes | no |
| Q99LB2 | DHRS4_MOUSE | 1, ., 1, ., 1, ., 1, 8, 4 | 0.3281 | 0.9239 | 0.8709 | yes | no |
| Q5RCF8 | DHRS4_PONAB | 1, ., 1, ., 1, ., 1, 8, 4 | 0.3359 | 0.9353 | 0.8848 | yes | no |
| Q6G9Y2 | FABG_STAAS | 1, ., 1, ., 1, ., 1, 0, 0 | 0.3172 | 0.8821 | 0.9430 | yes | no |
| P66782 | Y1385_MYCBO | 1, ., -, ., -, ., - | 0.3055 | 0.8935 | 0.9514 | yes | no |
| Q9PKF7 | FABG_CHLMU | 1, ., 1, ., 1, ., 1, 0, 0 | 0.328 | 0.8859 | 0.9395 | yes | no |
| P39640 | BACC_BACSU | 1, ., -, ., -, ., - | 0.3438 | 0.9391 | 0.9762 | yes | no |
| P50199 | GNO_GLUOX | 1, ., 1, ., 1, ., 6, 9 | 0.3215 | 0.9391 | 0.9648 | yes | no |
| Q8SPU8 | DHRS4_BOVIN | 1, ., 1, ., 1, ., 1, 8, 4 | 0.3359 | 0.9353 | 0.8817 | yes | no |
| P94681 | TSAC_COMTE | 1, ., 2, ., 1, ., 6, 2 | 0.3253 | 0.9505 | 0.9920 | yes | no |
| P0A2D1 | UCPA_SALTY | 1, ., -, ., -, ., - | 0.3023 | 0.9277 | 0.9277 | yes | no |
| P43713 | FABG_HAEIN | 1, ., 1, ., 1, ., 1, 0, 0 | 0.3238 | 0.9049 | 0.9834 | yes | no |
| P38004 | FABG_CHLTR | 1, ., 1, ., 1, ., 1, 0, 0 | 0.3145 | 0.9011 | 0.9556 | yes | no |
| Q9BTZ2 | DHRS4_HUMAN | 1, ., 1, ., 1, ., 1, 8, 4 | 0.3359 | 0.9353 | 0.8848 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.1.1 | 0.963 |
| 4th Layer | 1.1.1.269 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 263 | |||
| cd05329 | 251 | cd05329, TR_SDR_c, tropinone reductase-I and II (T | 1e-140 | |
| PRK09242 | 257 | PRK09242, PRK09242, tropinone reductase; Provision | 1e-94 | |
| cd05233 | 234 | cd05233, SDR_c, classical (c) SDRs | 2e-74 | |
| PRK05653 | 246 | PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) | 4e-67 | |
| COG1028 | 251 | COG1028, FabG, Dehydrogenases with different speci | 5e-66 | |
| PRK12825 | 249 | PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) | 2e-64 | |
| PRK12826 | 251 | PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote | 1e-59 | |
| PRK05565 | 247 | PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) | 1e-59 | |
| PRK07231 | 251 | PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) | 2e-58 | |
| cd05347 | 248 | cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena | 3e-58 | |
| PRK12829 | 264 | PRK12829, PRK12829, short chain dehydrogenase; Pro | 3e-58 | |
| PRK05557 | 248 | PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) | 6e-57 | |
| TIGR01830 | 239 | TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier | 5e-56 | |
| cd05333 | 240 | cd05333, BKR_SDR_c, beta-Keto acyl carrier protein | 8e-56 | |
| cd05344 | 253 | cd05344, BKR_like_SDR_like, putative beta-ketoacyl | 7e-55 | |
| PRK12827 | 249 | PRK12827, PRK12827, short chain dehydrogenase; Pro | 6e-52 | |
| cd05352 | 252 | cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M | 6e-51 | |
| cd05365 | 242 | cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi | 9e-51 | |
| cd05362 | 243 | cd05362, THN_reductase-like_SDR_c, tetrahydroxynap | 1e-49 | |
| cd05364 | 253 | cd05364, SDR_c11, classical (c) SDR, subgroup 11 | 9e-49 | |
| PRK06124 | 256 | PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro | 9e-49 | |
| cd05358 | 253 | cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc | 2e-48 | |
| cd05341 | 247 | cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta | 2e-48 | |
| cd08935 | 271 | cd08935, mannonate_red_SDR_c, putative D-mannonate | 4e-47 | |
| PRK06172 | 253 | PRK06172, PRK06172, short chain dehydrogenase; Pro | 2e-46 | |
| PRK06484 | 520 | PRK06484, PRK06484, short chain dehydrogenase; Val | 5e-46 | |
| cd05369 | 249 | cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta | 1e-45 | |
| PRK08213 | 259 | PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro | 7e-45 | |
| PRK06701 | 290 | PRK06701, PRK06701, short chain dehydrogenase; Pro | 1e-44 | |
| cd05359 | 242 | cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c | 1e-44 | |
| PRK09135 | 249 | PRK09135, PRK09135, pteridine reductase; Provision | 1e-44 | |
| cd08936 | 256 | cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re | 2e-44 | |
| PRK06113 | 255 | PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro | 2e-44 | |
| PRK06935 | 258 | PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog | 3e-44 | |
| TIGR02415 | 254 | TIGR02415, 23BDH, acetoin reductases | 6e-44 | |
| PRK12429 | 258 | PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas | 2e-43 | |
| PRK07856 | 252 | PRK07856, PRK07856, short chain dehydrogenase; Pro | 2e-43 | |
| TIGR01963 | 255 | TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase | 4e-43 | |
| PRK12939 | 250 | PRK12939, PRK12939, short chain dehydrogenase; Pro | 4e-43 | |
| cd05366 | 257 | cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol | 6e-42 | |
| PRK07814 | 263 | PRK07814, PRK07814, short chain dehydrogenase; Pro | 7e-42 | |
| PRK08265 | 261 | PRK08265, PRK08265, short chain dehydrogenase; Pro | 4e-41 | |
| cd05345 | 248 | cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl | 5e-41 | |
| PRK08277 | 278 | PRK08277, PRK08277, D-mannonate oxidoreductase; Pr | 5e-41 | |
| PRK08324 | 681 | PRK08324, PRK08324, short chain dehydrogenase; Val | 1e-40 | |
| PRK06138 | 252 | PRK06138, PRK06138, short chain dehydrogenase; Pro | 3e-40 | |
| PRK07523 | 255 | PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro | 5e-40 | |
| PRK07097 | 265 | PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro | 7e-40 | |
| cd05355 | 270 | cd05355, SDR_c1, classical (c) SDR, subgroup 1 | 7e-40 | |
| PRK07060 | 245 | PRK07060, PRK07060, short chain dehydrogenase; Pro | 8e-40 | |
| PRK07478 | 254 | PRK07478, PRK07478, short chain dehydrogenase; Pro | 1e-39 | |
| PRK06841 | 255 | PRK06841, PRK06841, short chain dehydrogenase; Pro | 2e-39 | |
| PRK06500 | 249 | PRK06500, PRK06500, short chain dehydrogenase; Pro | 4e-39 | |
| PRK08936 | 261 | PRK08936, PRK08936, glucose-1-dehydrogenase; Provi | 4e-39 | |
| cd08940 | 258 | cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge | 9e-39 | |
| cd08930 | 250 | cd08930, SDR_c8, classical (c) SDR, subgroup 8 | 1e-38 | |
| TIGR01832 | 248 | TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena | 1e-38 | |
| PRK06484 | 520 | PRK06484, PRK06484, short chain dehydrogenase; Val | 2e-38 | |
| cd08942 | 250 | cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy | 2e-38 | |
| PRK06398 | 258 | PRK06398, PRK06398, aldose dehydrogenase; Validate | 5e-38 | |
| PRK12828 | 239 | PRK12828, PRK12828, short chain dehydrogenase; Pro | 7e-38 | |
| PRK07035 | 252 | PRK07035, PRK07035, short chain dehydrogenase; Pro | 9e-38 | |
| cd05351 | 244 | cd05351, XR_like_SDR_c, xylulose reductase-like, c | 2e-37 | |
| PRK06463 | 255 | PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) | 3e-37 | |
| cd05357 | 234 | cd05357, PR_SDR_c, pteridine reductase (PR), class | 5e-37 | |
| PRK12745 | 256 | PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote | 1e-36 | |
| pfam00106 | 167 | pfam00106, adh_short, short chain dehydrogenase | 1e-36 | |
| cd08945 | 258 | cd08945, PKR_SDR_c, Polyketide ketoreductase, clas | 4e-36 | |
| PRK12824 | 245 | PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro | 7e-36 | |
| PRK08226 | 263 | PRK08226, PRK08226, short chain dehydrogenase; Pro | 1e-35 | |
| TIGR03971 | 265 | TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil | 3e-35 | |
| cd08944 | 246 | cd08944, SDR_c12, classical (c) SDR, subgroup 12 | 5e-35 | |
| cd08943 | 250 | cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al | 5e-35 | |
| TIGR01831 | 239 | TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote | 5e-35 | |
| cd05324 | 225 | cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu | 9e-35 | |
| cd05374 | 248 | cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster | 2e-34 | |
| COG0300 | 265 | COG0300, DltE, Short-chain dehydrogenases of vario | 2e-34 | |
| cd05368 | 241 | cd05368, DHRS6_like_SDR_c, human DHRS6-like, class | 2e-34 | |
| PRK07576 | 264 | PRK07576, PRK07576, short chain dehydrogenase; Pro | 3e-34 | |
| cd05330 | 257 | cd05330, cyclohexanol_reductase_SDR_c, cyclohexano | 3e-34 | |
| PRK08063 | 250 | PRK08063, PRK08063, enoyl-(acyl carrier protein) r | 4e-34 | |
| PRK06523 | 260 | PRK06523, PRK06523, short chain dehydrogenase; Pro | 6e-34 | |
| PRK12743 | 256 | PRK12743, PRK12743, oxidoreductase; Provisional | 6e-34 | |
| PRK08589 | 272 | PRK08589, PRK08589, short chain dehydrogenase; Val | 7e-34 | |
| cd05326 | 249 | cd05326, secoisolariciresinol-DH_like_SDR_c, secoi | 8e-34 | |
| PRK07326 | 237 | PRK07326, PRK07326, short chain dehydrogenase; Pro | 1e-33 | |
| cd08939 | 239 | cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine | 2e-33 | |
| PRK08643 | 256 | PRK08643, PRK08643, acetoin reductase; Validated | 2e-33 | |
| PRK06077 | 252 | PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) | 3e-33 | |
| PRK06171 | 266 | PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro | 3e-33 | |
| TIGR04316 | 250 | TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben | 5e-33 | |
| cd05337 | 255 | cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl | 5e-33 | |
| PRK08628 | 258 | PRK08628, PRK08628, short chain dehydrogenase; Pro | 6e-33 | |
| PRK12937 | 245 | PRK12937, PRK12937, short chain dehydrogenase; Pro | 1e-32 | |
| cd08937 | 256 | cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa | 2e-32 | |
| COG4221 | 246 | COG4221, COG4221, Short-chain alcohol dehydrogenas | 2e-32 | |
| PRK07666 | 239 | PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) | 2e-32 | |
| PRK07577 | 234 | PRK07577, PRK07577, short chain dehydrogenase; Pro | 3e-32 | |
| PRK12935 | 247 | PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro | 2e-31 | |
| PRK12936 | 245 | PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote | 4e-31 | |
| PRK07774 | 250 | PRK07774, PRK07774, short chain dehydrogenase; Pro | 6e-31 | |
| PRK05867 | 253 | PRK05867, PRK05867, short chain dehydrogenase; Pro | 7e-31 | |
| TIGR01829 | 242 | TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta | 7e-31 | |
| cd05332 | 257 | cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste | 8e-31 | |
| PRK07067 | 257 | PRK07067, PRK07067, sorbitol dehydrogenase; Provis | 9e-31 | |
| PRK08220 | 252 | PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy | 1e-30 | |
| PRK07069 | 251 | PRK07069, PRK07069, short chain dehydrogenase; Val | 1e-30 | |
| cd05331 | 244 | cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz | 2e-30 | |
| PRK07063 | 260 | PRK07063, PRK07063, short chain dehydrogenase; Pro | 2e-30 | |
| PRK06057 | 255 | PRK06057, PRK06057, short chain dehydrogenase; Pro | 5e-30 | |
| PRK06114 | 254 | PRK06114, PRK06114, short chain dehydrogenase; Pro | 6e-30 | |
| PRK13394 | 262 | PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas | 7e-30 | |
| cd05327 | 269 | cd05327, retinol-DH_like_SDR_c_like, retinol dehyd | 7e-30 | |
| cd08929 | 226 | cd08929, SDR_c4, classical (c) SDR, subgroup 4 | 1e-29 | |
| PRK08993 | 253 | PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog | 1e-29 | |
| PRK06128 | 300 | PRK06128, PRK06128, oxidoreductase; Provisional | 2e-29 | |
| cd05328 | 250 | cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de | 3e-29 | |
| cd05370 | 228 | cd05370, SDR_c2, classical (c) SDR, subgroup 2 | 3e-29 | |
| cd05323 | 244 | cd05323, ADH_SDR_c_like, insect type alcohol dehyd | 5e-29 | |
| cd08932 | 223 | cd08932, HetN_like_SDR_c, HetN oxidoreductase-like | 5e-29 | |
| PRK08217 | 253 | PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) | 5e-29 | |
| PRK12481 | 251 | PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog | 6e-29 | |
| PRK06200 | 263 | PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny | 1e-28 | |
| PRK08085 | 254 | PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro | 2e-28 | |
| PRK06181 | 263 | PRK06181, PRK06181, short chain dehydrogenase; Pro | 5e-28 | |
| cd08933 | 261 | cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl | 7e-28 | |
| cd05338 | 246 | cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena | 1e-27 | |
| cd05356 | 239 | cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst | 3e-27 | |
| cd05371 | 252 | cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr | 4e-27 | |
| PRK06198 | 260 | PRK06198, PRK06198, short chain dehydrogenase; Pro | 6e-27 | |
| PRK07831 | 262 | PRK07831, PRK07831, short chain dehydrogenase; Pro | 1e-26 | |
| PRK12747 | 252 | PRK12747, PRK12747, short chain dehydrogenase; Pro | 1e-26 | |
| PRK06550 | 235 | PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) | 2e-26 | |
| PRK06949 | 258 | PRK06949, PRK06949, short chain dehydrogenase; Pro | 2e-26 | |
| PRK07062 | 265 | PRK07062, PRK07062, short chain dehydrogenase; Pro | 3e-26 | |
| cd08934 | 243 | cd08934, CAD_SDR_c, clavulanic acid dehydrogenase | 9e-26 | |
| PRK12746 | 254 | PRK12746, PRK12746, short chain dehydrogenase; Pro | 1e-25 | |
| PRK08339 | 263 | PRK08339, PRK08339, short chain dehydrogenase; Pro | 1e-25 | |
| cd05339 | 243 | cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy | 2e-25 | |
| PRK09730 | 247 | PRK09730, PRK09730, putative NAD(P)-binding oxidor | 2e-25 | |
| PRK06125 | 259 | PRK06125, PRK06125, short chain dehydrogenase; Pro | 2e-25 | |
| cd05349 | 246 | cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl | 3e-25 | |
| TIGR03206 | 250 | TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy | 4e-25 | |
| PRK07201 | 657 | PRK07201, PRK07201, short chain dehydrogenase; Pro | 5e-25 | |
| PRK12823 | 260 | PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1 | 6e-25 | |
| cd05360 | 233 | cd05360, SDR_c3, classical (c) SDR, subgroup 3 | 7e-25 | |
| PRK07677 | 252 | PRK07677, PRK07677, short chain dehydrogenase; Pro | 7e-25 | |
| PRK12748 | 256 | PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote | 9e-25 | |
| cd09761 | 242 | cd09761, A3DFK9-like_SDR_c, Clostridium thermocell | 1e-24 | |
| pfam13561 | 239 | pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote | 1e-24 | |
| cd05367 | 241 | cd05367, SPR-like_SDR_c, sepiapterin reductase (SP | 1e-24 | |
| cd05348 | 257 | cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro | 1e-24 | |
| cd05363 | 254 | cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), | 1e-24 | |
| PRK08416 | 260 | PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro | 2e-24 | |
| cd05325 | 233 | cd05325, carb_red_sniffer_like_SDR_c, carbonyl red | 3e-24 | |
| PRK07074 | 257 | PRK07074, PRK07074, short chain dehydrogenase; Pro | 4e-24 | |
| cd09763 | 265 | cd09763, DHRS1-like_SDR_c, human dehydrogenase/red | 1e-23 | |
| TIGR02632 | 676 | TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate | 1e-23 | |
| PRK06123 | 248 | PRK06123, PRK06123, short chain dehydrogenase; Pro | 1e-23 | |
| cd05361 | 242 | cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de | 2e-23 | |
| PRK09072 | 263 | PRK09072, PRK09072, short chain dehydrogenase; Pro | 3e-23 | |
| PRK06947 | 248 | PRK06947, PRK06947, glucose-1-dehydrogenase; Provi | 4e-23 | |
| cd05350 | 239 | cd05350, SDR_c6, classical (c) SDR, subgroup 6 | 4e-23 | |
| COG3967 | 245 | COG3967, DltE, Short-chain dehydrogenase involved | 7e-23 | |
| PRK08263 | 275 | PRK08263, PRK08263, short chain dehydrogenase; Pro | 7e-23 | |
| PRK12938 | 246 | PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro | 9e-23 | |
| PRK09134 | 258 | PRK09134, PRK09134, short chain dehydrogenase; Pro | 2e-22 | |
| cd05353 | 250 | cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)- | 2e-22 | |
| PRK07985 | 294 | PRK07985, PRK07985, oxidoreductase; Provisional | 2e-22 | |
| PRK09186 | 256 | PRK09186, PRK09186, flagellin modification protein | 4e-22 | |
| PRK05875 | 276 | PRK05875, PRK05875, short chain dehydrogenase; Pro | 5e-22 | |
| PRK12742 | 237 | PRK12742, PRK12742, oxidoreductase; Provisional | 5e-22 | |
| PRK07890 | 258 | PRK07890, PRK07890, short chain dehydrogenase; Pro | 6e-22 | |
| cd05346 | 249 | cd05346, SDR_c5, classical (c) SDR, subgroup 5 | 8e-22 | |
| cd05340 | 236 | cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li | 9e-22 | |
| PRK07454 | 241 | PRK07454, PRK07454, short chain dehydrogenase; Pro | 1e-21 | |
| PRK07109 | 334 | PRK07109, PRK07109, short chain dehydrogenase; Pro | 1e-21 | |
| PRK07041 | 230 | PRK07041, PRK07041, short chain dehydrogenase; Pro | 2e-21 | |
| COG0623 | 259 | COG0623, FabI, Enoyl-[acyl-carrier-protein] | 2e-21 | |
| cd05343 | 250 | cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c | 3e-21 | |
| PRK05866 | 293 | PRK05866, PRK05866, short chain dehydrogenase; Pro | 1e-20 | |
| PLN02253 | 280 | PLN02253, PLN02253, xanthoxin dehydrogenase | 2e-20 | |
| PRK12859 | 256 | PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote | 2e-20 | |
| PRK12384 | 259 | PRK12384, PRK12384, sorbitol-6-phosphate dehydroge | 2e-20 | |
| PRK08267 | 260 | PRK08267, PRK08267, short chain dehydrogenase; Pro | 3e-20 | |
| cd05372 | 250 | cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) | 1e-19 | |
| cd08931 | 227 | cd08931, SDR_c9, classical (c) SDR, subgroup 9 | 1e-19 | |
| PRK07370 | 258 | PRK07370, PRK07370, enoyl-(acyl carrier protein) r | 3e-19 | |
| PRK08642 | 253 | PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) | 5e-19 | |
| TIGR03325 | 262 | TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3- | 5e-19 | |
| PRK08945 | 247 | PRK08945, PRK08945, putative oxoacyl-(acyl carrier | 8e-19 | |
| cd05354 | 235 | cd05354, SDR_c7, classical (c) SDR, subgroup 7 | 8e-19 | |
| PRK08219 | 227 | PRK08219, PRK08219, short chain dehydrogenase; Pro | 9e-19 | |
| PRK05786 | 238 | PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) | 9e-19 | |
| PRK12744 | 257 | PRK12744, PRK12744, short chain dehydrogenase; Pro | 2e-18 | |
| PRK06483 | 236 | PRK06483, PRK06483, dihydromonapterin reductase; P | 2e-18 | |
| PRK05876 | 275 | PRK05876, PRK05876, short chain dehydrogenase; Pro | 5e-18 | |
| PRK07832 | 272 | PRK07832, PRK07832, short chain dehydrogenase; Pro | 5e-18 | |
| PRK06179 | 270 | PRK06179, PRK06179, short chain dehydrogenase; Pro | 1e-17 | |
| PRK07825 | 273 | PRK07825, PRK07825, short chain dehydrogenase; Pro | 2e-17 | |
| PRK07792 | 306 | PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) | 4e-17 | |
| PRK12428 | 241 | PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydro | 6e-17 | |
| PRK06182 | 273 | PRK06182, PRK06182, short chain dehydrogenase; Val | 9e-16 | |
| PRK08340 | 259 | PRK08340, PRK08340, glucose-1-dehydrogenase; Provi | 2e-15 | |
| PRK08017 | 256 | PRK08017, PRK08017, oxidoreductase; Provisional | 3e-15 | |
| PRK08264 | 238 | PRK08264, PRK08264, short chain dehydrogenase; Val | 4e-15 | |
| PRK05717 | 255 | PRK05717, PRK05717, oxidoreductase; Validated | 8e-15 | |
| PRK06924 | 251 | PRK06924, PRK06924, short chain dehydrogenase; Pro | 8e-15 | |
| PRK06194 | 287 | PRK06194, PRK06194, hypothetical protein; Provisio | 2e-14 | |
| PRK06914 | 280 | PRK06914, PRK06914, short chain dehydrogenase; Pro | 2e-14 | |
| cd09805 | 281 | cd09805, type2_17beta_HSD-like_SDR_c, human 17beta | 2e-14 | |
| PRK08703 | 239 | PRK08703, PRK08703, short chain dehydrogenase; Pro | 3e-14 | |
| cd05322 | 257 | cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy | 5e-14 | |
| cd11731 | 198 | cd11731, Lin1944_like_SDR_c, Lin1944 and related p | 5e-14 | |
| PRK05650 | 270 | PRK05650, PRK05650, short chain dehydrogenase; Pro | 6e-14 | |
| PRK08261 | 450 | PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) | 6e-14 | |
| TIGR02685 | 267 | TIGR02685, pter_reduc_Leis, pteridine reductase | 3e-13 | |
| PRK07533 | 258 | PRK07533, PRK07533, enoyl-(acyl carrier protein) r | 3e-13 | |
| PRK07791 | 286 | PRK07791, PRK07791, short chain dehydrogenase; Pro | 5e-13 | |
| cd05334 | 221 | cd05334, DHPR_SDR_c_like, dihydropteridine reducta | 9e-13 | |
| smart00822 | 180 | smart00822, PKS_KR, This enzymatic domain is part | 1e-12 | |
| cd05373 | 238 | cd05373, SDR_c10, classical (c) SDR, subgroup 10 | 2e-12 | |
| PRK05693 | 274 | PRK05693, PRK05693, short chain dehydrogenase; Pro | 3e-12 | |
| cd09806 | 258 | cd09806, type1_17beta-HSD-like_SDR_c, human estrog | 3e-12 | |
| PRK08415 | 274 | PRK08415, PRK08415, enoyl-(acyl carrier protein) r | 4e-12 | |
| PRK08690 | 261 | PRK08690, PRK08690, enoyl-(acyl carrier protein) r | 8e-12 | |
| cd11730 | 206 | cd11730, Tthb094_like_SDR_c, Tthb094 and related p | 2e-11 | |
| PRK08177 | 225 | PRK08177, PRK08177, short chain dehydrogenase; Pro | 2e-11 | |
| PRK05872 | 296 | PRK05872, PRK05872, short chain dehydrogenase; Pro | 3e-11 | |
| PRK08278 | 273 | PRK08278, PRK08278, short chain dehydrogenase; Pro | 3e-11 | |
| cd09807 | 274 | cd09807, retinol-DH_like_SDR_c, retinol dehydrogen | 3e-11 | |
| PRK07024 | 257 | PRK07024, PRK07024, short chain dehydrogenase; Pro | 4e-11 | |
| PLN02780 | 320 | PLN02780, PLN02780, ketoreductase/ oxidoreductase | 5e-11 | |
| PRK05855 | 582 | PRK05855, PRK05855, short chain dehydrogenase; Val | 2e-10 | |
| TIGR01500 | 256 | TIGR01500, sepiapter_red, sepiapterin reductase | 2e-10 | |
| cd08953 | 436 | cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup | 3e-10 | |
| PRK06139 | 330 | PRK06139, PRK06139, short chain dehydrogenase; Pro | 3e-10 | |
| PRK06940 | 275 | PRK06940, PRK06940, short chain dehydrogenase; Pro | 5e-10 | |
| PRK08594 | 257 | PRK08594, PRK08594, enoyl-(acyl carrier protein) r | 5e-10 | |
| pfam08659 | 181 | pfam08659, KR, KR domain | 1e-09 | |
| cd09762 | 243 | cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro | 2e-09 | |
| cd09808 | 255 | cd09808, DHRS-12_like_SDR_c-like, human dehydrogen | 3e-09 | |
| PRK09291 | 257 | PRK09291, PRK09291, short chain dehydrogenase; Pro | 5e-09 | |
| PRK10538 | 248 | PRK10538, PRK10538, malonic semialdehyde reductase | 7e-09 | |
| PRK06180 | 277 | PRK06180, PRK06180, short chain dehydrogenase; Pro | 8e-09 | |
| PRK06101 | 240 | PRK06101, PRK06101, short chain dehydrogenase; Pro | 9e-09 | |
| PRK07806 | 248 | PRK07806, PRK07806, short chain dehydrogenase; Pro | 2e-08 | |
| PRK06079 | 252 | PRK06079, PRK06079, enoyl-(acyl carrier protein) r | 3e-08 | |
| PRK05993 | 277 | PRK05993, PRK05993, short chain dehydrogenase; Pro | 6e-08 | |
| PRK07984 | 262 | PRK07984, PRK07984, enoyl-(acyl carrier protein) r | 7e-08 | |
| PRK07102 | 243 | PRK07102, PRK07102, short chain dehydrogenase; Pro | 7e-08 | |
| PRK06953 | 222 | PRK06953, PRK06953, short chain dehydrogenase; Pro | 7e-08 | |
| PRK06482 | 276 | PRK06482, PRK06482, short chain dehydrogenase; Pro | 1e-07 | |
| PRK07023 | 243 | PRK07023, PRK07023, short chain dehydrogenase; Pro | 1e-07 | |
| PRK06997 | 260 | PRK06997, PRK06997, enoyl-(acyl carrier protein) r | 2e-07 | |
| cd05274 | 375 | cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt | 2e-07 | |
| cd02266 | 186 | cd02266, SDR, Short-chain dehydrogenases/reductase | 2e-07 | |
| PRK08251 | 248 | PRK08251, PRK08251, short chain dehydrogenase; Pro | 3e-07 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 4e-07 | |
| PRK05854 | 313 | PRK05854, PRK05854, short chain dehydrogenase; Pro | 6e-07 | |
| PRK06300 | 299 | PRK06300, PRK06300, enoyl-(acyl carrier protein) r | 6e-07 | |
| PRK07775 | 274 | PRK07775, PRK07775, short chain dehydrogenase; Pro | 1e-06 | |
| PLN02730 | 303 | PLN02730, PLN02730, enoyl-[acyl-carrier-protein] r | 3e-06 | |
| cd09809 | 284 | cd09809, human_WWOX_like_SDR_c-like, human WWOX (W | 4e-06 | |
| PRK06603 | 260 | PRK06603, PRK06603, enoyl-(acyl carrier protein) r | 5e-06 | |
| PRK06196 | 315 | PRK06196, PRK06196, oxidoreductase; Provisional | 8e-06 | |
| PRK07578 | 199 | PRK07578, PRK07578, short chain dehydrogenase; Pro | 1e-05 | |
| PRK08159 | 272 | PRK08159, PRK08159, enoyl-(acyl carrier protein) r | 4e-05 | |
| PRK06197 | 306 | PRK06197, PRK06197, short chain dehydrogenase; Pro | 4e-05 | |
| PRK09009 | 235 | PRK09009, PRK09009, C factor cell-cell signaling p | 4e-05 | |
| PRK06505 | 271 | PRK06505, PRK06505, enoyl-(acyl carrier protein) r | 6e-05 | |
| PRK05884 | 223 | PRK05884, PRK05884, short chain dehydrogenase; Pro | 1e-04 | |
| PRK08303 | 305 | PRK08303, PRK08303, short chain dehydrogenase; Pro | 0.001 | |
| PRK07889 | 256 | PRK07889, PRK07889, enoyl-(acyl carrier protein) r | 0.002 | |
| cd05237 | 287 | cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l | 0.002 | |
| cd08954 | 452 | cd08954, KR_1_FAS_SDR_x, beta-ketoacyl reductase ( | 0.004 |
| >gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 393 bits (1011), Expect = e-140
Identities = 157/253 (62%), Positives = 208/253 (82%), Gaps = 3/253 (1%)
Query: 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGS 67
RW+L+G TALVTGGTKGIGYA+VEELA GA V+TC+RN+ EL++ + EW+ KG +V GS
Sbjct: 1 RWNLEGKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGFKVEGS 60
Query: 68 VCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAY 127
VCD+ R++R++LM+TV+S F GKLNIL+NNAGT I KE ++TEED+S +M+TNFE+AY
Sbjct: 61 VCDVSSRSERQELMDTVASHFGGKLNILVNNAGTNIRKEAKDYTEEDYSLIMSTNFEAAY 120
Query: 128 HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
HLS+LAHPLLK++GNGNI+FISSVAGVIA+P + Y ++K A+NQLT++LACEWAKD IR
Sbjct: 121 HLSRLAHPLLKASGNGNIVFISSVAGVIAVPSGAPYGATKGALNQLTRSLACEWAKDNIR 180
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
VN VAPWVI TPL++ V + L+ +++ RTP+ R GEP EV+++VAFLC+ A SY+
Sbjct: 181 VNAVAPWVIATPLVEPVIQQKENLD---KVIERTPLKRFGEPEEVAALVAFLCMPAASYI 237
Query: 248 TGQVICVDGGYSV 260
TGQ+I VDGG +
Sbjct: 238 TGQIIAVDGGLTA 250
|
This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251 |
| >gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional | Back alignment and domain information |
|---|
Score = 278 bits (713), Expect = 1e-94
Identities = 112/260 (43%), Positives = 156/260 (60%), Gaps = 6/260 (2%)
Query: 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQ 63
+ RW L G TAL+TG +KGIG A+ E GA V +R+ L Q E + +
Sbjct: 2 QHRWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPERE 61
Query: 64 VSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNF 123
V G D+ R +++ V +DG L+IL+NNAG I K ++TE+++ + TN
Sbjct: 62 VHGLAADVSDDEDRRAILDWVEDHWDG-LHILVNNAGGNIRKAAIDYTEDEWRGIFETNL 120
Query: 124 ESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAK 183
SA+ LS+ AHPLLK + I+ I SV+G+ + + Y +K A+ Q+T+NLA EWA+
Sbjct: 121 FSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNLAVEWAE 180
Query: 184 DKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243
D IRVN VAPW IRTPL D ++ E +++ RTPM R GEP EV++ VAFLC+ A
Sbjct: 181 DGIRVNAVAPWYIRTPLTSGPLSDPDYYE---QVIERTPMRRVGEPEEVAAAVAFLCMPA 237
Query: 244 TSYVTGQVICVDGGYSVTGF 263
SY+TGQ I VDGG+ GF
Sbjct: 238 ASYITGQCIAVDGGFLRYGF 257
|
Length = 257 |
| >gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 226 bits (577), Expect = 2e-74
Identities = 94/240 (39%), Positives = 128/240 (53%), Gaps = 6/240 (2%)
Query: 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRA 75
ALVTG + GIG A+ LA GA V RNE L + ++ G D+
Sbjct: 1 ALVTGASSGIGRAIARRLAREGAKVVLADRNEEAL-AELAAIEALGGNAVAVQADVSDEE 59
Query: 76 QREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHP 135
E L+E +F G+L+IL+NNAG P E T+ED+ V+ N + L++ A P
Sbjct: 60 DVEALVEEALEEF-GRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVFLLTRAALP 118
Query: 136 LLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWV 195
+K G G I+ ISSVAG+ +P + YA+SK A+ LT++LA E A IRVN VAP +
Sbjct: 119 HMKKQGGGRIVNISSVAGLRPLPGQAAYAASKAALEGLTRSLALELAPYGIRVNAVAPGL 178
Query: 196 IRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVICVD 255
+ TP+L + + E A P+ R G P EV+ V FL SY+TGQVI VD
Sbjct: 179 VDTPMLAKLGPEEAEKELAA----AIPLGRLGTPEEVAEAVVFLASDEASYITGQVIPVD 234
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234 |
| >gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 208 bits (531), Expect = 4e-67
Identities = 92/248 (37%), Positives = 130/248 (52%), Gaps = 6/248 (2%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
SL+G TALVTG ++GIG A+ LAA GA V NE E ++ G + V
Sbjct: 2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVF 61
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
D+ A L+E F G L+IL+NNAG +EED+ V+ N +++
Sbjct: 62 DVSDEAAVRALIEAAVEAF-GALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNV 120
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
+ A P + A G I+ ISSV+GV P + Y+++K + TK LA E A I VN
Sbjct: 121 VRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGVIGFTKALALELASRGITVN 180
Query: 190 TVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTG 249
VAP I T + + + + E ++ P+ R G+P EV++ VAFL A SY+TG
Sbjct: 181 AVAPGFIDTDMTEGLPE-----EVKAEILKEIPLGRLGQPEEVANAVAFLASDAASYITG 235
Query: 250 QVICVDGG 257
QVI V+GG
Sbjct: 236 QVIPVNGG 243
|
Length = 246 |
| >gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 205 bits (523), Expect = 5e-66
Identities = 99/256 (38%), Positives = 130/256 (50%), Gaps = 12/256 (4%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKG-LQVSG 66
L G ALVTG + GIG A+ LA GA +V E K G + +
Sbjct: 2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAA 61
Query: 67 SVCDL-KIRAQREKLMETVSSQFDGKLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFE 124
D+ E L+ +F G+++IL+NNAG P E TEED+ V+ N
Sbjct: 62 VAADVSDDEESVEALVAAAEEEF-GRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLL 120
Query: 125 SAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKD 184
A+ L++ A PL+K I+ ISSVAG+ P + YA+SK A+ LTK LA E A
Sbjct: 121 GAFLLTRAALPLMKK---QRIVNISSVAGLGGPPGQAAYAASKAALIGLTKALALELAPR 177
Query: 185 KIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS-A 243
IRVN VAP I TP+ +E LE R+ R P+ R G P EV++ VAFL A
Sbjct: 178 GIRVNAVAPGYIDTPMTAALESA--ELEALKRLAARIPLGRLGTPEEVAAAVAFLASDEA 235
Query: 244 TSYVTGQVICVDGGYS 259
SY+TGQ + VDGG
Sbjct: 236 ASYITGQTLPVDGGLL 251
|
Length = 251 |
| >gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 201 bits (513), Expect = 2e-64
Identities = 86/249 (34%), Positives = 131/249 (52%), Gaps = 7/249 (2%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSV 68
SL G ALVTG +G+G A+ LA GA +V +E + ++ ++ G +
Sbjct: 3 SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQ 62
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYH 128
D+ +A E + +F G+++IL+NNAG F K + +++++ V+ N +H
Sbjct: 63 ADVTDKAALEAAVAAAVERF-GRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFH 121
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
L + P ++ G I+ ISSVAG+ P S YA++K + LTK LA E A+ I V
Sbjct: 122 LLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGLVGLTKALARELAEYGITV 181
Query: 189 NTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248
N VAP I T + K++ E TP+ R G P +++ VAFLC A+ Y+T
Sbjct: 182 NMVAPGDIDTDM-----KEATIEEAREAKDAETPLGRSGTPEDIARAVAFLCSDASDYIT 236
Query: 249 GQVICVDGG 257
GQVI V GG
Sbjct: 237 GQVIEVTGG 245
|
Length = 249 |
| >gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Score = 188 bits (481), Expect = 1e-59
Identities = 82/249 (32%), Positives = 119/249 (47%), Gaps = 6/249 (2%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
L+G ALVTG +GIG A+ LAA GA V + + ++ G +
Sbjct: 3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQV 62
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
D++ RA + + F G+L+IL+ NAG F E +E + V+ N + L
Sbjct: 63 DVRDRAALKAAVAAGVEDF-GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLL 121
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVI-AIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
+Q A P L AG G I+ SSVAG P + YA+SK + T+ LA E A I V
Sbjct: 122 TQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKAGLVGFTRALALELAARNITV 181
Query: 189 NTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248
N+V P + TP+ + A + P+ R GEP ++++ V FL Y+T
Sbjct: 182 NSVHPGGVDTPMAGNLGDAQW----AEAIAAAIPLGRLGEPEDIAAAVLFLASDEARYIT 237
Query: 249 GQVICVDGG 257
GQ + VDGG
Sbjct: 238 GQTLPVDGG 246
|
Length = 251 |
| >gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 188 bits (481), Expect = 1e-59
Identities = 88/252 (34%), Positives = 133/252 (52%), Gaps = 9/252 (3%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKGLQVSGSV 68
L G A+VTG + GIG A+ E LA GA ++ NE + ++E K +G
Sbjct: 3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAY-DINEEAAQELLEEIKEEGGDAIAVK 61
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYH 128
D+ E L+E + +F GK++IL+NNAG T+ T+E++ V+ N
Sbjct: 62 ADVSSEEDVENLVEQIVEKF-GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVML 120
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
L++ A P + +G I+ ISS+ G+I +Y++SK A+N TK LA E A IRV
Sbjct: 121 LTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAKELAPSGIRV 180
Query: 189 NTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248
N VAP I T + + ++ E + P+ R G+P E++ VV FL SY+T
Sbjct: 181 NAVAPGAIDTEMWSSFSEED--KEGLAEEI---PLGRLGKPEEIAKVVLFLASDDASYIT 235
Query: 249 GQVICVDGGYSV 260
GQ+I VDGG++
Sbjct: 236 GQIITVDGGWTC 247
|
Length = 247 |
| >gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 185 bits (473), Expect = 2e-58
Identities = 84/252 (33%), Positives = 124/252 (49%), Gaps = 4/252 (1%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
L+G A+VTG + GIG + AA GA V RNE + E + G + D
Sbjct: 3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGG-RAIAVAAD 61
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTF-IPKETTEFTEEDFSTVMTTNFESAYHL 129
+ A E + +F G ++IL+NNAGT + E +F + N +S Y
Sbjct: 62 VSDEADVEAAVAAALERF-GSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLW 120
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
+Q A P ++ G G I+ ++S AG+ P Y +SK A+ LTK LA E DKIRVN
Sbjct: 121 TQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGAVITLTKALAAELGPDKIRVN 180
Query: 190 TVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTG 249
VAP V+ T LL+ + E+ + + P+ R G P ++++ FL S++TG
Sbjct: 181 AVAPVVVETGLLEAFMGEPT-PENRAKFLATIPLGRLGTPEDIANAALFLASDEASWITG 239
Query: 250 QVICVDGGYSVT 261
+ VDGG V
Sbjct: 240 VTLVVDGGRCVG 251
|
Length = 251 |
| >gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 185 bits (472), Expect = 3e-58
Identities = 86/251 (34%), Positives = 130/251 (51%), Gaps = 4/251 (1%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
SLKG ALVTG ++GIG+ + LA GA + SRNE + + Q + +G++ + C
Sbjct: 2 SLKGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGVEATAFTC 61
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
D+ + +E + F GK++IL+NNAG EF E ++ V+ N + +
Sbjct: 62 DVSDEEAIKAAVEAIEEDF-GKIDILVNNAGIIRRHPAEEFPEAEWRDVIDVNLNGVFFV 120
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
SQ + G+G II I S+ + P YA+SK + LTK LA EWA+ I+VN
Sbjct: 121 SQAVARHMIKQGHGKIINICSLLSELGGPPVPAYAASKGGVAGLTKALATEWARHGIQVN 180
Query: 190 TVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTG 249
+AP T + + V D F + ++ R P R G+P ++ FL A+ YV G
Sbjct: 181 AIAPGYFATEMTEAVVADPEFND---DILKRIPAGRWGQPEDLVGAAVFLASDASDYVNG 237
Query: 250 QVICVDGGYSV 260
Q+I VDGG+
Sbjct: 238 QIIFVDGGWLA 248
|
Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248 |
| >gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 185 bits (472), Expect = 3e-58
Identities = 88/256 (34%), Positives = 131/256 (51%), Gaps = 11/256 (4%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
L G+ LVTGG GIG A+ E A GA VH C +E L G +V+ +V
Sbjct: 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAAR--LPGAKVTATVA 65
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTE-FTEEDFSTVMTTNFESAYH 128
D+ AQ E++ +T +F G L++L+NNAG P + T E + + N ++
Sbjct: 66 DVADPAQVERVFDTAVERFGG-LDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFY 124
Query: 129 LSQLAHPLLKSAGNGN-IIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
++ A PLLK++G+G II +SSVAG + P + YA+SK A+ L K+LA E IR
Sbjct: 125 FARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAVVGLVKSLAIELGPLGIR 184
Query: 188 VNTVAPWVIRTPLLDTV------EKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCL 241
VN + P ++R P + V + E + + + R EP ++++ FL
Sbjct: 185 VNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATALFLAS 244
Query: 242 SATSYVTGQVICVDGG 257
A Y+TGQ I VDG
Sbjct: 245 PAARYITGQAISVDGN 260
|
Length = 264 |
| >gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 181 bits (463), Expect = 6e-57
Identities = 85/249 (34%), Positives = 131/249 (52%), Gaps = 7/249 (2%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVH-TCSRNETELNQRIQEWKSKGLQVSGSV 68
SL+G ALVTG ++GIG A+ E LAA GA V + +E + E + G +
Sbjct: 2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQ 61
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYH 128
D+ E+ ++ ++F G ++IL+NNAG EED+ V+ TN ++
Sbjct: 62 GDVSDAESVERAVDEAKAEF-GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFN 120
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
L++ + +G II ISSV G++ P + YA+SK + TK+LA E A I V
Sbjct: 121 LTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKAGVIGFTKSLARELASRGITV 180
Query: 189 NTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248
N VAP I T + D + +D ++ + P+ R G+P E++S VAFL +Y+T
Sbjct: 181 NAVAPGFIETDMTDALPEDV-----KEAILAQIPLGRLGQPEEIASAVAFLASDEAAYIT 235
Query: 249 GQVICVDGG 257
GQ + V+GG
Sbjct: 236 GQTLHVNGG 244
|
Length = 248 |
| >gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Score = 179 bits (456), Expect = 5e-56
Identities = 89/245 (36%), Positives = 136/245 (55%), Gaps = 11/245 (4%)
Query: 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRI-QEWKSKGLQVSGSVCDLKIR 74
ALVTG ++GIG A+ +LA GA V R+ E + + +E K+ G++ G VCD+ R
Sbjct: 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDR 60
Query: 75 AQREKLMETVSSQFDGKLNILINNAGTFIPKET--TEFTEEDFSTVMTTNFESAYHLSQL 132
+ ++E + + G ++IL+NNAG I ++ EED+ V+ TN ++L+Q
Sbjct: 61 EDVKAVVEEIEEEL-GPIDILVNNAG--ITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQA 117
Query: 133 AHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVA 192
++ +G II ISSV G++ + YA+SK + TK+LA E A I VN VA
Sbjct: 118 VLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKELASRNITVNAVA 177
Query: 193 PWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVI 252
P I T + D + + +++ + P+ R G P EV++ VAFL SY+TGQVI
Sbjct: 178 PGFIDTDMTDKLSEKV-----KKKILSQIPLGRFGTPEEVANAVAFLASDEASYITGQVI 232
Query: 253 CVDGG 257
VDGG
Sbjct: 233 HVDGG 237
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239 |
| >gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 178 bits (455), Expect = 8e-56
Identities = 88/247 (35%), Positives = 133/247 (53%), Gaps = 14/247 (5%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR 74
ALVTG ++GIG A+ LAA GA V R+E + ++E K+ G + D+ R
Sbjct: 2 VALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNAAALEADVSDR 61
Query: 75 AQREKLMETVSSQFDGKLNILINNAG----TFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
E L+E V ++F G ++IL+NNAG + + +EED+ V+ N ++++
Sbjct: 62 EAVEALVEKVEAEF-GPVDILVNNAGITRDNLLMR----MSEEDWDAVINVNLTGVFNVT 116
Query: 131 QLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNT 190
Q + +G II ISSV G+I P + YA+SK + TK+LA E A I VN
Sbjct: 117 QAVIRAMIKRRSGRIINISSVVGLIGNPGQANYAASKAGVIGFTKSLAKELASRGITVNA 176
Query: 191 VAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQ 250
VAP I T + D + + +++ + P+ R G P EV++ VAFL SY+TGQ
Sbjct: 177 VAPGFIDTDMTDALPEKVK-----EKILKQIPLGRLGTPEEVANAVAFLASDDASYITGQ 231
Query: 251 VICVDGG 257
V+ V+GG
Sbjct: 232 VLHVNGG 238
|
This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240 |
| >gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR | Back alignment and domain information |
|---|
Score = 177 bits (450), Expect = 7e-55
Identities = 84/251 (33%), Positives = 125/251 (49%), Gaps = 7/251 (2%)
Query: 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLK 72
G ALVT + GIG A+ LA GA V C+RN L + E ++ G V V DL
Sbjct: 1 GKVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRAGGAGVLAVVADLT 60
Query: 73 IRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQL 132
++L+E F G+++IL+NNAG P E T+ED+ S + +
Sbjct: 61 DPEDIDRLVEKAGDAF-GRVDILVNNAGGPPPGPFAELTDEDWLEAFDLKLLSVIRIVRA 119
Query: 133 AHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVA 192
P +K G G I+ ISS+ P + ++ + L K L+ E A D + VN+V
Sbjct: 120 VLPGMKERGWGRIVNISSLTVKEPEPNLVLSNVARAGLIGLVKTLSRELAPDGVTVNSVL 179
Query: 193 P-WV----IRTPLLDTVEKDSNFLEHANRMVLR-TPMLRPGEPNEVSSVVAFLCLSATSY 246
P ++ +R L EK+ +E A + V P+ R G+P E+++++AFL SY
Sbjct: 180 PGYIDTERVRRLLEARAEKEGISVEEAEKEVASQIPLGRVGKPEELAALIAFLASEKASY 239
Query: 247 VTGQVICVDGG 257
+TGQ I VDGG
Sbjct: 240 ITGQAILVDGG 250
|
This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253 |
| >gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 169 bits (430), Expect = 6e-52
Identities = 90/255 (35%), Positives = 131/255 (51%), Gaps = 13/255 (5%)
Query: 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHT----CSRNETELNQRIQEWKSKGLQV 64
SL L+TGG+ G+G A+ LAA GA V R E + ++ G +
Sbjct: 2 ASLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKA 61
Query: 65 SGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFE 124
G D++ A ++ +F G+L+IL+NNAG E + E++ V+ N +
Sbjct: 62 LGLAFDVRDFAATRAALDAGVEEF-GRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLD 120
Query: 125 SAYHLSQ-LAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAK 183
++++Q P++++ G I+ I+SVAGV YA+SK + LTK LA E A
Sbjct: 121 GFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASKAGLIGLTKTLANELAP 180
Query: 184 DKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243
I VN VAP I TP+ D + L P+ R GEP+EV+++VAFL A
Sbjct: 181 RGITVNAVAPGAINTPMADNAAPTEHLLNPV-------PVQRLGEPDEVAALVAFLVSDA 233
Query: 244 TSYVTGQVICVDGGY 258
SYVTGQVI VDGG+
Sbjct: 234 ASYVTGQVIPVDGGF 248
|
Length = 249 |
| >gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 166 bits (423), Expect = 6e-51
Identities = 86/254 (33%), Positives = 132/254 (51%), Gaps = 9/254 (3%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGSV 68
SLKG A+VTGG++GIG A+ LA GA V + ++ +E K G++
Sbjct: 5 SLKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTKAYK 64
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYH 128
CD+ + EK + + F GK++ILI NAG + K ++T E ++ V+ N ++
Sbjct: 65 CDVSSQESVEKTFKQIQKDF-GKIDILIANAGITVHKPALDYTYEQWNKVIDVNLNGVFN 123
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVIA-IPM-CSIYASSKVAMNQLTKNLACEWAKDKI 186
+Q A + K G G++I +S++G I P + Y +SK A+ L K+LA EWAK I
Sbjct: 124 CAQAAAKIFKKQGKGSLIITASMSGTIVNRPQPQAAYNASKAAVIHLAKSLAVEWAKYFI 183
Query: 187 RVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246
RVN+++P I T L D V D + P+ R P E+ +L A+SY
Sbjct: 184 RVNSISPGYIDTDLTDFV--DKELRKKWESY---IPLKRIALPEELVGAYLYLASDASSY 238
Query: 247 VTGQVICVDGGYSV 260
TG + +DGGY+
Sbjct: 239 TTGSDLIIDGGYTC 252
|
NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252 |
| >gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 166 bits (421), Expect = 9e-51
Identities = 90/243 (37%), Positives = 125/243 (51%), Gaps = 6/243 (2%)
Query: 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRA 75
A+VTGG GIG A+ LA GA V + G Q G C++
Sbjct: 2 AIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAIGLECNVTSEQ 61
Query: 76 QREKLMETVSSQFDGKLNILINNAGTFIPKE-TTEFTEEDFSTVMTTNFESAYHLSQLAH 134
E +++ SQF G + IL+NNAG PK TEEDF N SA+ LSQL
Sbjct: 62 DLEAVVKATVSQF-GGITILVNNAGGGGPKPFDMPMTEEDFEWAFKLNLFSAFRLSQLCA 120
Query: 135 PLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPW 194
P ++ AG G I+ ISS++ + Y SSK A+N +T+NLA + IRVN VAP
Sbjct: 121 PHMQKAGGGAILNISSMSSENKNVRIAAYGSSKAAVNHMTRNLAFDLGPKGIRVNAVAPG 180
Query: 195 VIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVICV 254
++T L +V E M+ TP+ R GEP ++++ FLC A+++V+GQV+ V
Sbjct: 181 AVKTDALASVLTP----EIERAMLKHTPLGRLGEPEDIANAALFLCSPASAWVSGQVLTV 236
Query: 255 DGG 257
GG
Sbjct: 237 SGG 239
|
This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242 |
| >gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 163 bits (414), Expect = 1e-49
Identities = 86/252 (34%), Positives = 123/252 (48%), Gaps = 14/252 (5%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNET--ELNQRIQEWKSKGLQVSG 66
L G ALVTG ++GIG A+ + LA GA +V+ S E+ I+ K + V
Sbjct: 1 LAGKVALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEAAGGKAIAVQA 60
Query: 67 SVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESA 126
V D +Q +L + F G ++IL+NNAG + K E +EE+F + T N + A
Sbjct: 61 DVSDP---SQVARLFDAAEKAF-GGVDILVNNAGVMLKKPIAETSEEEFDRMFTVNTKGA 116
Query: 127 YHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKI 186
+ + Q A L+ G II ISS P YA SK A+ T+ LA E I
Sbjct: 117 FFVLQEAAKRLR--DGGRIINISSSLTAAYTPNYGAYAGSKAAVEAFTRVLAKELGGRGI 174
Query: 187 RVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246
VN VAP + T + + + +A +P+ R GEP +++ VVAFL +
Sbjct: 175 TVNAVAPGPVDTDMFYAGKTEEAVEGYAK----MSPLGRLGEPEDIAPVVAFLASPDGRW 230
Query: 247 VTGQVICVDGGY 258
V GQVI +GGY
Sbjct: 231 VNGQVIRANGGY 242
|
1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243 |
| >gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11 | Back alignment and domain information |
|---|
Score = 161 bits (409), Expect = 9e-49
Identities = 84/256 (32%), Positives = 130/256 (50%), Gaps = 12/256 (4%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL---QVSGS 67
L G A++TG + GIG A GA + R+ L + Q G+ ++
Sbjct: 1 LSGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLV 60
Query: 68 VCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAY 127
V DL +++++ T ++F G+L+IL+NNAG + E++ VM N +
Sbjct: 61 VADLTEEEGQDRIISTTLAKF-GRLDILVNNAGILAKGGGEDQDIEEYDKVMNLNLRAVI 119
Query: 128 HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
+L++LA P L G I+ +SSVAG + P Y SK A++Q T+ A E A +R
Sbjct: 120 YLTKLAVPHLIKT-KGEIVNVSSVAGGRSFPGVLYYCISKAALDQFTRCTALELAPKGVR 178
Query: 188 VNTVAPWVIRTPL---LDTVEKDSN-FLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243
VN+V+P VI T + E+ FL A P+ RPG +EV+ +AFL A
Sbjct: 179 VNSVSPGVIVTGFHRRMGMPEEQYIKFLSRAKETH---PLGRPGTVDEVAEAIAFLASDA 235
Query: 244 TSYVTGQVICVDGGYS 259
+S++TGQ++ VDGG
Sbjct: 236 SSFITGQLLPVDGGRH 251
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253 |
| >gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 161 bits (409), Expect = 9e-49
Identities = 79/254 (31%), Positives = 119/254 (46%), Gaps = 4/254 (1%)
Query: 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSG 66
QR+SL G ALVTG +G+G+ + LA GA V RN L + ++ G
Sbjct: 5 QRFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEA 64
Query: 67 SVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESA 126
D+ + ++ G+L+IL+NN G + E + ++ T+ +
Sbjct: 65 LAFDIADEEAVAAAFARIDAEH-GRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAP 123
Query: 127 YHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKI 186
LS+LA +K G G II I+S+AG +A ++Y ++K + L + LA E+ I
Sbjct: 124 ILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQGLTGLMRALAAEFGPHGI 183
Query: 187 RVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246
N +AP T + D + RTP+ R G P E++ FL A SY
Sbjct: 184 TSNAIAPGYFATETNAAMAADPAVGPWLAQ---RTPLGRWGRPEEIAGAAVFLASPAASY 240
Query: 247 VTGQVICVDGGYSV 260
V G V+ VDGGYSV
Sbjct: 241 VNGHVLAVDGGYSV 254
|
Length = 256 |
| >gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 160 bits (407), Expect = 2e-48
Identities = 87/254 (34%), Positives = 121/254 (47%), Gaps = 12/254 (4%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIV----HTCSRNETELNQRIQEWKSKGLQVSG 66
LKG ALVTG + GIG A+ LA GA V + E+ + I+ K + V
Sbjct: 1 LKGKVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAVGGKAIAVQA 60
Query: 67 SVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESA 126
V L ++ +F G L+IL+NNAG + E T ED++ V+ N
Sbjct: 61 DVSK---EEDVVALFQSAIKEF-GTLDILVNNAGLQGDASSHEMTLEDWNKVIDVNLTGQ 116
Query: 127 YHLSQLA-HPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDK 185
+ ++ A KS G II +SSV I P YA+SK + +TK LA E+A
Sbjct: 117 FLCAREAIKRFRKSKIKGKIINMSSVHEKIPWPGHVNYAASKGGVKMMTKTLAQEYAPKG 176
Query: 186 IRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245
IRVN +AP I TP+ D ++ PM R GEP E+++ A+L S
Sbjct: 177 IRVNAIAPGAINTPINAEAWDDPEQRADLLSLI---PMGRIGEPEEIAAAAAWLASDEAS 233
Query: 246 YVTGQVICVDGGYS 259
YVTG + VDGG +
Sbjct: 234 YVTGTTLFVDGGMT 247
|
GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253 |
| >gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 160 bits (406), Expect = 2e-48
Identities = 81/253 (32%), Positives = 122/253 (48%), Gaps = 10/253 (3%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
LKG A+VTGG +G+G A L A GA V + E E
Sbjct: 2 RLKGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELGDAARFFH---L 58
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
D+ +++T F G+L++L+NNAG T E++ ++ N +
Sbjct: 59 DVTDEDGWTAVVDTAREAF-GRLDVLVNNAGILTGGTVETTTLEEWRRLLDINLTGVFLG 117
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAK--DKIR 187
++ P +K AG G+II +SS+ G++ P + Y +SK A+ LTK+ A E A IR
Sbjct: 118 TRAVIPPMKEAGGGSIINMSSIEGLVGDPALAAYNASKGAVRGLTKSAALECATQGYGIR 177
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
VN+V P I TP+ D + + TPM R GEP+E++ V +L +S+V
Sbjct: 178 VNSVHPGYIYTPMTDELLIA----QGEMGNYPNTPMGRAGEPDEIAYAVVYLASDESSFV 233
Query: 248 TGQVICVDGGYSV 260
TG + VDGGY+
Sbjct: 234 TGSELVVDGGYTA 246
|
This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247 |
| >gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR | Back alignment and domain information |
|---|
Score = 157 bits (399), Expect = 4e-47
Identities = 90/270 (33%), Positives = 138/270 (51%), Gaps = 24/270 (8%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
SLK A++TGGT +G A+ LA GA V RN+ + ++ +E + G +
Sbjct: 2 SLKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGRAIALAA 61
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETT--------------EFTEEDF 115
D+ RA E+ E + +QF G ++ILIN AG P TT + EE +
Sbjct: 62 DVLDRASLERAREEIVAQF-GTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEGW 120
Query: 116 STVMTTNFESAYHLSQ-LAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLT 174
V N ++ SQ +L+ G+II ISS+ + Y+++K A++ T
Sbjct: 121 EFVFDLNLNGSFLPSQVFGKDMLE-QKGGSIINISSMNAFSPLTKVPAYSAAKAAVSNFT 179
Query: 175 KNLACEWAKDKIRVNTVAPWVIRTP----LLDTVEKDSNFLEHANRMVLRTPMLRPGEPN 230
+ LA E+A +RVN +AP TP LL D ++ + +N+++ RTPM R G+P
Sbjct: 180 QWLAVEFATTGVRVNAIAPGFFVTPQNRKLLI--NPDGSYTDRSNKILGRTPMGRFGKPE 237
Query: 231 EVSSVVAFLC-LSATSYVTGQVICVDGGYS 259
E+ + FL A+S+VTG VI VDGG+S
Sbjct: 238 ELLGALLFLASEKASSFVTGVVIPVDGGFS 267
|
D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271 |
| >gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 154 bits (392), Expect = 2e-46
Identities = 89/250 (35%), Positives = 125/250 (50%), Gaps = 6/250 (2%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
G ALVTGG GIG A A GA V R+ + + + G + CD
Sbjct: 5 FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACD 64
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPK-ETTEFTEEDFSTVMTTNFESAYHL 129
+ A+ + L+E + + G+L+ NNAG I + E +E +F +M N + +
Sbjct: 65 VTRDAEVKALVEQTIAAY-GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLC 123
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
+ PL+ + G G I+ +SVAG+ A P SIYA+SK A+ LTK+ A E+AK IRVN
Sbjct: 124 MKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEYAKKGIRVN 183
Query: 190 TVAPWVIRTPLLDTV-EKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248
V P VI T + E D E A M P+ R G+ EV+S V +LC S+ T
Sbjct: 184 AVCPAVIDTDMFRRAYEADPRKAEFAAAM---HPVGRIGKVEEVASAVLYLCSDGASFTT 240
Query: 249 GQVICVDGGY 258
G + VDGG
Sbjct: 241 GHALMVDGGA 250
|
Length = 253 |
| >gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 160 bits (407), Expect = 5e-46
Identities = 85/254 (33%), Positives = 130/254 (51%), Gaps = 9/254 (3%)
Query: 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDL 71
+ LVTG GIG A + A G V RN +R D+
Sbjct: 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHH---ALAMDV 60
Query: 72 KIRAQREKLMETVSSQFDGKLNILINNAGTFIP--KETTEFTEEDFSTVMTTNFESAYHL 129
AQ + E + +F G++++L+NNAG P T + T E+F+ + N AY +
Sbjct: 61 SDEAQIREGFEQLHREF-GRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLV 119
Query: 130 SQLAHPLLKSAGNGN-IIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
++ A L+ G+G I+ ++S AG++A+P + Y++SK A+ LT++LACEWA IRV
Sbjct: 120 AREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWAAKGIRV 179
Query: 189 NTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248
N V P +RT ++ +E+ A R R P+ R G P E++ V FL SY+T
Sbjct: 180 NAVLPGYVRTQMVAELERAGKLDPSAVRS--RIPLGRLGRPEEIAEAVFFLASDQASYIT 237
Query: 249 GQVICVDGGYSVTG 262
G + VDGG++V G
Sbjct: 238 GSTLVVDGGWTVYG 251
|
Length = 520 |
| >gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR | Back alignment and domain information |
|---|
Score = 153 bits (388), Expect = 1e-45
Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 9/251 (3%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL-QVSGSVC 69
LKG A +TGG GIG A+ + A GA V R L +E S + C
Sbjct: 1 LKGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGRAHPIQC 60
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNA-GTFIPKETTEFTEEDFSTVMTTNFESAYH 128
D++ E ++ +F GK++ILINNA G F+ + F TV+ + ++
Sbjct: 61 DVRDPEAVEAAVDETLKEF-GKIDILINNAAGNFLAP-AESLSPNGFKTVIDIDLNGTFN 118
Query: 129 LSQLAHPLLKSAGN-GNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
++ L A + G+I+ IS+ P A++K ++ LT++LA EW IR
Sbjct: 119 TTKAVGKRLIEAKHGGSILNISATYAYTGSPFQVHSAAAKAGVDALTRSLAVEWGPYGIR 178
Query: 188 VNTVAPWVI-RTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246
VN +AP I T ++ + +M+ R P+ R G P E++++ FL A SY
Sbjct: 179 VNAIAPGPIPTTEGMERLAPSGKS---EKKMIERVPLGRLGTPEEIANLALFLLSDAASY 235
Query: 247 VTGQVICVDGG 257
+ G + VDGG
Sbjct: 236 INGTTLVVDGG 246
|
TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249 |
| >gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 151 bits (383), Expect = 7e-45
Identities = 84/263 (31%), Positives = 128/263 (48%), Gaps = 19/263 (7%)
Query: 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSG 66
+ + L G TALVTGG++G+G + E L GA V +R EL + ++ G+
Sbjct: 6 ELFDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALW 65
Query: 67 SVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESA 126
D+ A E+L E +F G ++IL+NNAG + E + VM N
Sbjct: 66 IAADVADEADIERLAEETLERF-GHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGL 124
Query: 127 YHLSQ-LAHPLLKSAGNGNIIFISSVAGVIAIP---MCSI-YASSKVAMNQLTKNLACEW 181
+ LSQ +A + G G II ++SVAG+ P M +I Y +SK A+ T+ LA EW
Sbjct: 125 FLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAAEW 184
Query: 182 AKDKIRVNTVAPWVIRTP----LLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVA 237
IRVN +AP T L+ + +D ++ TP+ R G+ ++
Sbjct: 185 GPHGIRVNAIAPGFFPTKMTRGTLERLGED---------LLAHTPLGRLGDDEDLKGAAL 235
Query: 238 FLCLSATSYVTGQVICVDGGYSV 260
L A+ ++TGQ++ VDGG S
Sbjct: 236 LLASDASKHITGQILAVDGGVSA 258
|
Length = 259 |
| >gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 152 bits (385), Expect = 1e-44
Identities = 90/260 (34%), Positives = 130/260 (50%), Gaps = 21/260 (8%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE----TELNQRIQEWKSKGLQVSG 66
LKG AL+TGG GIG AV A GA + +E E QR+++ K L + G
Sbjct: 44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPG 103
Query: 67 SVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKET-TEFTEEDFSTVMTTNFES 125
V D A + +E + G+L+IL+NNA P+++ + T E TN S
Sbjct: 104 DVSD---EAFCKDAVEETVREL-GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYS 159
Query: 126 AYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDK 185
+H+++ A P LK II S+ G Y+++K A++ T++LA +
Sbjct: 160 YFHMTKAALPHLKQGSA--IINTGSITGYEGNETLIDYSATKGAIHAFTRSLAQSLVQKG 217
Query: 186 IRVNTVAPWVIRTPLL--DTVEKD-SNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS 242
IRVN VAP I TPL+ D E+ S F TPM RPG+P E++ FL
Sbjct: 218 IRVNAVAPGPIWTPLIPSDFDEEKVSQFGS-------NTPMQRPGQPEELAPAYVFLASP 270
Query: 243 ATSYVTGQVICVDGGYSVTG 262
+SY+TGQ++ V+GG V G
Sbjct: 271 DSSYITGQMLHVNGGVIVNG 290
|
Length = 290 |
| >gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 150 bits (380), Expect = 1e-44
Identities = 81/246 (32%), Positives = 123/246 (50%), Gaps = 5/246 (2%)
Query: 16 ALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR 74
ALVTGG++GIG A+ LA GA +V +++ + E + G + D+
Sbjct: 1 ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIEELGGKAVVVRADVSQP 60
Query: 75 AQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAH 134
E++ V +F G+L++L++NA + +E T + M TN ++ H +Q A
Sbjct: 61 QDVEEMFAAVKERF-GRLDVLVSNAAAGAFRPLSELTPAHWDAKMNTNLKALVHCAQQAA 119
Query: 135 PLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPW 194
L++ G G I+ ISS+ + A+P ++K A+ L + LA E IRVN V+P
Sbjct: 120 KLMRERGGGRIVAISSLGSIRALPNYLAVGTAKAALEALVRYLAVELGPRGIRVNAVSPG 179
Query: 195 VIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVICV 254
VI T L + LE A TP R G P +V+ V FLC A +TGQ + V
Sbjct: 180 VIDTDALAHFPNREDLLEAAAA---NTPAGRVGTPQDVADAVGFLCSDAARMITGQTLVV 236
Query: 255 DGGYSV 260
DGG S+
Sbjct: 237 DGGLSI 242
|
This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242 |
| >gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional | Back alignment and domain information |
|---|
Score = 150 bits (381), Expect = 1e-44
Identities = 83/259 (32%), Positives = 130/259 (50%), Gaps = 20/259 (7%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKGLQVSGS 67
+ AL+TGG + IG A+ L A G +H R+ E + E + GS
Sbjct: 3 TDSAKVALITGGARRIGAAIARTLHAAGYRVAIH-YHRSAAEADALAAELNA---LRPGS 58
Query: 68 VC----DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNF 123
DL +L+ + F G+L+ L+NNA +F P TE + + +N
Sbjct: 59 AAALQADLLDPDALPELVAACVAAF-GRLDALVNNASSFYPTPLGSITEAQWDDLFASNL 117
Query: 124 ESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAK 183
++ + LSQ A P L+ G I+ I+ + + +Y ++K A+ LT++LA E A
Sbjct: 118 KAPFFLSQAAAPQLRKQ-RGAIVNITDIHAERPLKGYPVYCAAKAALEMLTRSLALELAP 176
Query: 184 DKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVL-RTPMLRPGEPNEVSSVVAFLCLS 242
+ +RVN VAP I P E ++F E A + +L RTP+ R G P +++ V FL
Sbjct: 177 E-VRVNAVAPGAILWP-----EDGNSFDEEARQAILARTPLKRIGTPEDIAEAVRFLLAD 230
Query: 243 ATSYVTGQVICVDGGYSVT 261
A S++TGQ++ VDGG S+T
Sbjct: 231 A-SFITGQILAVDGGRSLT 248
|
Length = 249 |
| >gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 150 bits (380), Expect = 2e-44
Identities = 83/254 (32%), Positives = 131/254 (51%), Gaps = 7/254 (2%)
Query: 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVS 65
+R L ALVT T GIG A+ LA GA V SR + +++ + + +GL V+
Sbjct: 3 TRRDPLANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLSVT 62
Query: 66 GSVCDLKIRAQREKLMETVSSQFDGKLNILINNA--GTFIPKETTEFTEEDFSTVMTTNF 123
G+VC + RE+L+ T + G ++IL++NA F + TEE + ++ N
Sbjct: 63 GTVCHVGKAEDRERLVATAVNLH-GGVDILVSNAAVNPFFGN-ILDSTEEVWDKILDVNV 120
Query: 124 ESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAK 183
++ +++ P ++ G G+++ +SSVA P Y SK A+ LTKNLA E A
Sbjct: 121 KATALMTKAVVPEMEKRGGGSVVIVSSVAAFHPFPGLGPYNVSKTALLGLTKNLAPELAP 180
Query: 184 DKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243
IRVN +AP +I+T + D E M + R G+P + + +V+FLC
Sbjct: 181 RNIRVNCLAPGLIKTSFSSALWMDKAVEES---MKETLRIRRLGQPEDCAGIVSFLCSED 237
Query: 244 TSYVTGQVICVDGG 257
SY+TG+ + V GG
Sbjct: 238 ASYITGETVVVGGG 251
|
This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256 |
| >gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 149 bits (379), Expect = 2e-44
Identities = 89/258 (34%), Positives = 127/258 (49%), Gaps = 14/258 (5%)
Query: 4 FREQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQ 63
F L G A++TG GIG + A GA V N N + E + G Q
Sbjct: 2 FNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ 61
Query: 64 VSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNF 123
CD+ + L + S+ GK++IL+NNAG PK + DF N
Sbjct: 62 AFACRCDITSEQELSALADFALSKL-GKVDILVNNAGGGGPK-PFDMPMADFRRAYELNV 119
Query: 124 ESAYHLSQLAHPLLKSAGNGNIIFISSVAGV-IAIPMCSIYASSKVAMNQLTKNLACEWA 182
S +HLSQL P ++ G G I+ I+S+A I M S YASSK A + L +N+A +
Sbjct: 120 FSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTS-YASSKAAASHLVRNMAFDLG 178
Query: 183 KDKIRVNTVAPWVIRTPLLDTV---EKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFL 239
+ IRVN +AP I T L +V E + L+H TP+ R G+P ++++ FL
Sbjct: 179 EKNIRVNGIAPGAILTDALKSVITPEIEQKMLQH-------TPIRRLGQPQDIANAALFL 231
Query: 240 CLSATSYVTGQVICVDGG 257
C A S+V+GQ++ V GG
Sbjct: 232 CSPAASWVSGQILTVSGG 249
|
Length = 255 |
| >gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 149 bits (379), Expect = 3e-44
Identities = 90/268 (33%), Positives = 134/268 (50%), Gaps = 21/268 (7%)
Query: 1 MSDFREQRWSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKS 59
+ F +SL G A+VTGG G+G LA GA I+ T + +R+ E
Sbjct: 3 LDKFSMDFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIE--K 60
Query: 60 KGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVM 119
+G +V+ DL EK+++ +F GK++IL+NNAGT E+ +ED++ VM
Sbjct: 61 EGRKVTFVQVDLTKPESAEKVVKEALEEF-GKIDILVNNAGTIRRAPLLEYKDEDWNAVM 119
Query: 120 TTNFESAYHLSQLAHPLLKSAGNGNIIFISSV---AGVIAIPMCSIYASSKVAMNQLTKN 176
N S YHLSQ ++ G+G II I+S+ G +P Y +SK + LTK
Sbjct: 120 DINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPA---YTASKHGVAGLTKA 176
Query: 177 LACEWAKDKIRVNTVAPWVIRT----PLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEV 232
A E A I+VN +AP I+T P+ ++ L+ R P R GEP+++
Sbjct: 177 FANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILK-------RIPAGRWGEPDDL 229
Query: 233 SSVVAFLCLSATSYVTGQVICVDGGYSV 260
FL A+ YV G ++ VDGG+ V
Sbjct: 230 MGAAVFLASRASDYVNGHILAVDGGWLV 257
|
Length = 258 |
| >gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases | Back alignment and domain information |
|---|
Score = 148 bits (376), Expect = 6e-44
Identities = 79/254 (31%), Positives = 123/254 (48%), Gaps = 16/254 (6%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR 74
ALVTGG +GIG + E LA G V NE + +E G + D+ +
Sbjct: 2 VALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDK 61
Query: 75 AQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAH 134
Q ++ + +F G ++++NNAG E TEE+ V N + Q A
Sbjct: 62 DQVFSAIDQAAEKF-GGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAA 120
Query: 135 PLLKSAGN-GNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAP 193
K G+ G II +S+AG P+ S Y+S+K A+ LT+ A E A I VN P
Sbjct: 121 RQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCP 180
Query: 194 WVIRTPLLDTVEKDS----------NFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243
+++TP+ + +++++ F E ++ + L RP EP +V+ +V+FL
Sbjct: 181 GIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALG----RPSEPEDVAGLVSFLASED 236
Query: 244 TSYVTGQVICVDGG 257
+ Y+TGQ I VDGG
Sbjct: 237 SDYITGQSILVDGG 250
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254 |
| >gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 147 bits (374), Expect = 2e-43
Identities = 74/255 (29%), Positives = 113/255 (44%), Gaps = 8/255 (3%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
LKG ALVTG GIG + LA GA V N+ + + G + G D
Sbjct: 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMD 61
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
+ ++ F G ++IL+NNAG +F E + ++ + A+ +
Sbjct: 62 VTDEEAINAGIDYAVETF-GGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTT 120
Query: 131 QLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNT 190
+ A P++K+ G G II ++SV G++ + Y S+K + LTK +A E A + VN
Sbjct: 121 KAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGLIGLTKVVALEGATHGVTVNA 180
Query: 191 VAPWVIRTPL----LDTVEKDSNF-LEHANRMVL--RTPMLRPGEPNEVSSVVAFLCLSA 243
+ P + TPL + + K+ E VL P R E++ FL A
Sbjct: 181 ICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLASFA 240
Query: 244 TSYVTGQVICVDGGY 258
VTGQ VDGG+
Sbjct: 241 AKGVTGQAWVVDGGW 255
|
Length = 258 |
| >gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 147 bits (373), Expect = 2e-43
Identities = 73/251 (29%), Positives = 118/251 (47%), Gaps = 18/251 (7%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-LNQRIQEWKSKGLQVSGSV 68
L G LVTGGT+GIG + A GA V C R E ++ R E+ +
Sbjct: 3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPETVDGRPAEFHA--------- 53
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYH 128
D++ Q L++ + + G+L++L+NNAG E + ++ N +
Sbjct: 54 ADVRDPDQVAALVDAIVERH-GRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLL 112
Query: 129 LSQLAHPLLKS-AGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
++Q A+ +++ G G+I+ I SV+G P + Y ++K + LT++LA EWA K+R
Sbjct: 113 VAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTRSLAVEWAP-KVR 171
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRT-PMLRPGEPNEVSSVVAFLCLSATSY 246
VN V ++RT + D V T P+ R P +++ FL SY
Sbjct: 172 VNAVVVGLVRTEQSELHYGD----AEGIAAVAATVPLGRLATPADIAWACLFLASDLASY 227
Query: 247 VTGQVICVDGG 257
V+G + V GG
Sbjct: 228 VSGANLEVHGG 238
|
Length = 252 |
| >gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Score = 146 bits (371), Expect = 4e-43
Identities = 85/258 (32%), Positives = 122/258 (47%), Gaps = 14/258 (5%)
Query: 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLK 72
G TALVTG GIG A+ LAA GA V E + G V D+
Sbjct: 1 GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGSVIYLPADVT 60
Query: 73 IRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQL 132
+ ++ +++F G L+IL+NNAG EF ED+ ++ SA+H +
Sbjct: 61 KEDEIADMIAAAAAEF-GGLDILVNNAGIQHVAPIEEFPPEDWDRIIAVMLTSAFHTIRA 119
Query: 133 AHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVA 192
A P +K G G II I+S G++A P S Y ++K + LTK LA E A+ I VN +
Sbjct: 120 ALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALEVAEHGITVNAIC 179
Query: 193 PWVIRTPLLDTVEKDSNFLEHANRM----VLRTPMLRPG------EPNEVSSVVAFLCLS 242
P +RTPL VEK + V+R ML+ +EV+ +L
Sbjct: 180 PGYVRTPL---VEKQIADQAKTRGIPEEQVIREVMLKGQPTKRFVTVDEVAETALYLASD 236
Query: 243 ATSYVTGQVICVDGGYSV 260
A + +TGQ I +DGG++
Sbjct: 237 AAAQITGQAIVLDGGWTA 254
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255 |
| >gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 146 bits (371), Expect = 4e-43
Identities = 73/249 (29%), Positives = 115/249 (46%), Gaps = 5/249 (2%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
+L G ALVTG +G+G A E LA GA V E + ++ G +
Sbjct: 4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAA 63
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
DL A ++ + ++ G L+ L+NNAG K TE + + VM N + +
Sbjct: 64 DLADPASVQRFFDAAAAAL-GGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLM 122
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
+ A P L+ +G G I+ ++S + P Y +SK A+ +T++LA E I VN
Sbjct: 123 LRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGAVIGMTRSLARELGGRGITVN 182
Query: 190 TVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTG 249
+AP + T V D E + + R P++V+ V FL A +VTG
Sbjct: 183 AIAPGLTATEATAYVPAD----ERHAYYLKGRALERLQVPDDVAGAVLFLLSDAARFVTG 238
Query: 250 QVICVDGGY 258
Q++ V+GG+
Sbjct: 239 QLLPVNGGF 247
|
Length = 250 |
| >gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 143 bits (363), Expect = 6e-42
Identities = 80/255 (31%), Positives = 114/255 (44%), Gaps = 17/255 (6%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-LNQRIQEWKSKGLQVSGSVCDLKI 73
A++TG +GIG A+ E LAA G + N E IQE G D+
Sbjct: 4 VAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYNAVAVGADVTD 63
Query: 74 RAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLA 133
+ E L++ +F G ++++NNAG TEED V N Q A
Sbjct: 64 KDDVEALIDQAVEKF-GSFDVMVNNAGIAPITPLLTITEEDLKKVYAVNVFGVLFGIQAA 122
Query: 134 H-PLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVA 192
K G II SS+AGV P Y++SK A+ LT+ A E A I VN A
Sbjct: 123 ARQFKKLGHGGKIINASSIAGVQGFPNLGAYSASKFAVRGLTQTAAQELAPKGITVNAYA 182
Query: 193 PWVIRTPLLDTV----------EKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS 242
P +++T + D + + F E ++ + L R EP +V+ +V+FL
Sbjct: 183 PGIVKTEMWDYIDEEVGEIAGKPEGEGFAEFSSSIPLG----RLSEPEDVAGLVSFLASE 238
Query: 243 ATSYVTGQVICVDGG 257
+ Y+TGQ I VDGG
Sbjct: 239 DSDYITGQTILVDGG 253
|
2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 143 bits (363), Expect = 7e-42
Identities = 77/251 (30%), Positives = 128/251 (50%), Gaps = 6/251 (2%)
Query: 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGS 67
R+ L A+VTG +G+G A+ A GA V +R E++L++ ++ ++ G +
Sbjct: 5 RFRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVV 64
Query: 68 VCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAY 127
DL L F G+L+I++NN G +P + +D + T N +A+
Sbjct: 65 AADLAHPEATAGLAGQAVEAF-GRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAH 123
Query: 128 HLSQLAHPL-LKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKI 186
L+ A PL L+ +G G++I ISS G +A + Y ++K A+ T+ A + +I
Sbjct: 124 ALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAALAHYTRLAALDLCP-RI 182
Query: 187 RVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246
RVN +AP I T L+ V + E M TP+ R G+P ++++ +L A SY
Sbjct: 183 RVNAIAPGSILTSALEVVAAND---ELRAPMEKATPLRRLGDPEDIAAAAVYLASPAGSY 239
Query: 247 VTGQVICVDGG 257
+TG+ + VDGG
Sbjct: 240 LTGKTLEVDGG 250
|
Length = 263 |
| >gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 141 bits (358), Expect = 4e-41
Identities = 88/254 (34%), Positives = 132/254 (51%), Gaps = 9/254 (3%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
L G A+VTGG IG AV L A GA V + + + S G +
Sbjct: 3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDA-DNGAAVAA--SLGERARFIAT 59
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
D+ A E+ + TV ++F G+++IL+N A T++ + + D+ + N SA L
Sbjct: 60 DITDDAAIERAVATVVARF-GRVDILVNLACTYL-DDGLASSRADWLAALDVNLVSAAML 117
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
+Q AHP L G G I+ +S++ A +Y +SK A+ QLT+++A + A D IRVN
Sbjct: 118 AQAAHPHLARGG-GAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRSMAMDLAPDGIRVN 176
Query: 190 TVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPML-RPGEPNEVSSVVAFLCLSATSYVT 248
+V+P + ++D + A+R+ +L R G+P EV+ VVAFLC A S+VT
Sbjct: 177 SVSPGWTWSRVMDELSGGD--RAKADRVAAPFHLLGRVGDPEEVAQVVAFLCSDAASFVT 234
Query: 249 GQVICVDGGYSVTG 262
G VDGGYS G
Sbjct: 235 GADYAVDGGYSALG 248
|
Length = 261 |
| >gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR | Back alignment and domain information |
|---|
Score = 140 bits (356), Expect = 5e-41
Identities = 81/259 (31%), Positives = 118/259 (45%), Gaps = 18/259 (6%)
Query: 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSV 68
L+G A+VTG G G + A GA V N + + + + V
Sbjct: 1 MRLEGKVAIVTGAGSGFGEGIARRFAQEGARVVIADINADGAERVAADIGEAAIAIQADV 60
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAG-TFIPKETTEFTEEDFSTVMTTNFESAY 127
RA E ++E S+F G+L+IL+NNAG T K E EE+F V N +S Y
Sbjct: 61 TK---RADVEAMVEAALSKF-GRLDILVNNAGITHRNKPMLEVDEEEFDRVFAVNVKSIY 116
Query: 128 HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
+Q P ++ G G II I+S AG+ P + Y +SK + TK +A E A IR
Sbjct: 117 LSAQALVPHMEEQGGGVIINIASTAGLRPRPGLTWYNASKGWVVTATKAMAVELAPRNIR 176
Query: 188 VNTVAPWVIRTPLL------DTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCL 241
VN + P TPLL DT E + F P+ R P+++++ +L
Sbjct: 177 VNCLCPVAGETPLLSMFMGEDTPENRAKFRA-------TIPLGRLSTPDDIANAALYLAS 229
Query: 242 SATSYVTGQVICVDGGYSV 260
S++TG + VDGG +
Sbjct: 230 DEASFITGVALEVDGGRCI 248
|
This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248 |
| >gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 141 bits (359), Expect = 5e-41
Identities = 88/273 (32%), Positives = 132/273 (48%), Gaps = 29/273 (10%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
SLKG A++TGG +G A+ +ELA GA V RN+ + + E K+ G +
Sbjct: 7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKA 66
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETT---------------EFTEED 114
D+ + E+ + + F G +ILIN AG PK TT + EE
Sbjct: 67 DVLDKESLEQARQQILEDF-GPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEG 125
Query: 115 FSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSI--YASSKVAMNQ 172
F V N +Q+ + GNII ISS+ P+ + Y+++K A++
Sbjct: 126 FEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAF--TPLTKVPAYSAAKAAISN 183
Query: 173 LTKNLACEWAKDKIRVNTVAPWVI-----RTPLLDTVEKDSNFLEHANRMVLRTPMLRPG 227
T+ LA +AK IRVN +AP R L + D + E AN+++ TPM R G
Sbjct: 184 FTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNE---DGSLTERANKILAHTPMGRFG 240
Query: 228 EPNEVSSVVAFLC-LSATSYVTGQVICVDGGYS 259
+P E+ + +L A+S+VTG V+ VDGG+S
Sbjct: 241 KPEELLGTLLWLADEKASSFVTGVVLPVDGGFS 273
|
Length = 278 |
| >gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 148 bits (375), Expect = 1e-40
Identities = 77/270 (28%), Positives = 112/270 (41%), Gaps = 36/270 (13%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
L G ALVTG GIG A + LAA GA V +E E + G C
Sbjct: 419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPD-RALGVAC 477
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
D+ A + E + F G ++I+++NAG I E ++ED+ N + +
Sbjct: 478 DVTDEAAVQAAFEEAALAFGG-VDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLV 536
Query: 130 SQLAHPLLKSAGNG-NIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
++ A ++K+ G G +I+FI+S V P Y ++K A L + LA E D IRV
Sbjct: 537 AREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAELHLVRQLALELGPDGIRV 596
Query: 189 NTVAPWVIRTPLLDTVEKDSNFL---------------------EHANRMVLRTPMLRPG 227
N V P D V + S + R +L+ +
Sbjct: 597 NGVNP--------DAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVT--- 645
Query: 228 EPNEVSSVVAFLCLSATSYVTGQVICVDGG 257
P +V+ V FL S TG +I VDGG
Sbjct: 646 -PEDVAEAVVFLASGLLSKTTGAIITVDGG 674
|
Length = 681 |
| >gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 139 bits (351), Expect = 3e-40
Identities = 77/255 (30%), Positives = 118/255 (46%), Gaps = 13/255 (5%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
L G A+VTG GIG A + A GA V R+ + + G + D
Sbjct: 3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGG-RAFARQGD 61
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
+ E L++ V++++ G+L++L+NNAG E D+ VM N + +
Sbjct: 62 VGSAEAVEALVDFVAARW-GRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWA 120
Query: 131 QLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNT 190
+ A P+++ G G+I+ +S + + Y +SK A+ LT+ +A + A D IRVN
Sbjct: 121 KYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHATDGIRVNA 180
Query: 191 VAPWVIRTPLLDTVEKDSNFLEHANRMVLRT------PMLRPGEPNEVSSVVAFLCLSAT 244
VAP I TP + F HA+ LR PM R G EV+ FL +
Sbjct: 181 VAPGTIDTPYFRRI-----FARHADPEALREALRARHPMNRFGTAEEVAQAALFLASDES 235
Query: 245 SYVTGQVICVDGGYS 259
S+ TG + VDGG+
Sbjct: 236 SFATGTTLVVDGGWL 250
|
Length = 252 |
| >gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 138 bits (350), Expect = 5e-40
Identities = 83/256 (32%), Positives = 127/256 (49%), Gaps = 10/256 (3%)
Query: 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSV 68
+ L G ALVTG ++GIGYA+ E LA GA V R+ +L + K +GL
Sbjct: 6 FDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALA 65
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYH 128
D+ ++ ++ G ++IL+NNAG +F + F ++ TN S ++
Sbjct: 66 FDVTDHDAVRAAIDAFEAEI-GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFY 124
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
+ Q + + G G II I+SV +A P + Y ++K A+ LTK +A +WAK ++
Sbjct: 125 VGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKGAVGNLTKGMATDWAKHGLQC 184
Query: 189 NTVAPWVIRTPLLDTVEKDSNF---LEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245
N +AP TPL + D F LE RTP R G+ E+ FL A+S
Sbjct: 185 NAIAPGYFDTPLNAALVADPEFSAWLEK------RTPAGRWGKVEELVGACVFLASDASS 238
Query: 246 YVTGQVICVDGGYSVT 261
+V G V+ VDGG + +
Sbjct: 239 FVNGHVLYVDGGITAS 254
|
Length = 255 |
| >gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 138 bits (350), Expect = 7e-40
Identities = 73/251 (29%), Positives = 133/251 (52%), Gaps = 4/251 (1%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
SLKG AL+TG + GIG+A+ + A GA + N+ +++ + ++ G++ G VC
Sbjct: 7 SLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVC 66
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
D+ + ++ + + G ++IL+NNAG E + EDF V+ + + + +
Sbjct: 67 DVTDEDGVQAMVSQIEKEV-GVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIV 125
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
S+ P + G+G II I S+ + S YA++K + LTKN+A E+ + I+ N
Sbjct: 126 SKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQCN 185
Query: 190 TVAPWVIRTPLLDTV-EKDSNFLEHA-NRMVL-RTPMLRPGEPNEVSSVVAFLCLSATSY 246
+ P I TP + E ++ H ++ ++ +TP R G+P +++ FL A+++
Sbjct: 186 GIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAVFLASDASNF 245
Query: 247 VTGQVICVDGG 257
V G ++ VDGG
Sbjct: 246 VNGHILYVDGG 256
|
Length = 265 |
| >gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1 | Back alignment and domain information |
|---|
Score = 138 bits (350), Expect = 7e-40
Identities = 88/253 (34%), Positives = 127/253 (50%), Gaps = 16/253 (6%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEW----KSKGLQVS 65
LKG AL+TGG GIG AV A GA + E + + ++ K L +
Sbjct: 24 LKGKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEEGRKCLLIP 83
Query: 66 GSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKET-TEFTEEDFSTVMTTNFE 124
G DL + L++ V +F GKL+IL+NNA P+E+ + T E TN
Sbjct: 84 G---DLGDESFCRDLVKEVVKEF-GKLDILVNNAAYQHPQESIEDITTEQLEKTFRTNIF 139
Query: 125 SAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKD 184
S ++L++ A P LK + II +SV P YA++K A+ T+ L+ + A+
Sbjct: 140 SMFYLTKAALPHLKKGSS--IINTTSVTAYKGSPHLLDYAATKGAIVAFTRGLSLQLAEK 197
Query: 185 KIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244
IRVN VAP I TPL+ + + E ++ PM R G+P EV+ FL +
Sbjct: 198 GIRVNAVAPGPIWTPLIPSSFPEEKVSEFGSQ----VPMGRAGQPAEVAPAYVFLASQDS 253
Query: 245 SYVTGQVICVDGG 257
SYVTGQV+ V+GG
Sbjct: 254 SYVTGQVLHVNGG 266
|
These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270 |
| >gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 137 bits (348), Expect = 8e-40
Identities = 77/250 (30%), Positives = 119/250 (47%), Gaps = 14/250 (5%)
Query: 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLK 72
G + LVTG + GIG A LA GA V +RN L++ E + L++ V D
Sbjct: 9 GKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLD--VGD-- 64
Query: 73 IRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQL 132
A R L G + L+N AG + + T E F VM N A +++
Sbjct: 65 DAAIRAALAA------AGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARH 118
Query: 133 AHPLLKSAG-NGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTV 191
+ +AG G+I+ +SS A ++ +P Y +SK A++ +T+ L E IRVN+V
Sbjct: 119 VARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVELGPHGIRVNSV 178
Query: 192 APWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQV 251
P V TP+ D + + M+ P+ R E ++V++ + FL A S V+G
Sbjct: 179 NPTVTLTPMAAEAWSDP---QKSGPMLAAIPLGRFAEVDDVAAPILFLLSDAASMVSGVS 235
Query: 252 ICVDGGYSVT 261
+ VDGGY+
Sbjct: 236 LPVDGGYTAR 245
|
Length = 245 |
| >gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 137 bits (348), Expect = 1e-39
Identities = 80/257 (31%), Positives = 125/257 (48%), Gaps = 12/257 (4%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQ---VSG 66
L G A++TG + GIG A + A GA V +R + EL+Q + E +++G + ++G
Sbjct: 3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAG 62
Query: 67 SVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFES 125
V D A + L+ +F G L+I NNAGT E + E + + TN S
Sbjct: 63 DVRD---EAYAKALVALAVERF-GGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTS 118
Query: 126 AYHLSQLAHPLLKSAGNGNIIFISSVAGV-IAIPMCSIYASSKVAMNQLTKNLACEWAKD 184
A+ ++ P + + G G++IF S+ G P + YA+SK + LT+ LA E+
Sbjct: 119 AFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKAGLIGLTQVLAAEYGAQ 178
Query: 185 KIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244
IRVN + P TP+ + L + + R +P E++ FL A
Sbjct: 179 GIRVNALLPGGTDTPMGRAMGDTPEALAFVAGL---HALKRMAQPEEIAQAALFLASDAA 235
Query: 245 SYVTGQVICVDGGYSVT 261
S+VTG + VDGG S+T
Sbjct: 236 SFVTGTALLVDGGVSIT 252
|
Length = 254 |
| >gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 137 bits (346), Expect = 2e-39
Identities = 83/265 (31%), Positives = 134/265 (50%), Gaps = 14/265 (5%)
Query: 1 MSD--FREQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWK 58
M+D + + L G A+VTGG GIG+A+ E AA GA V R+E + E
Sbjct: 1 MTDTKQFDLAFDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSED-----VAEVA 55
Query: 59 SK--GLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFS 116
++ G G VCD+ E + V S F G+++IL+N+AG + + +EED+
Sbjct: 56 AQLLGGNAKGLVCDVSDSQSVEAAVAAVISAF-GRIDILVNSAGVALLAPAEDVSEEDWD 114
Query: 117 TVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKN 176
+ N + ++ ++Q + +AG G I+ ++S AGV+A+ Y +SK + +TK
Sbjct: 115 KTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVVGMTKV 174
Query: 177 LACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVV 236
LA EW I VN ++P V+ T L K + E R P R P E+++
Sbjct: 175 LALEWGPYGITVNAISPTVVLTEL----GKKAWAGEKGERAKKLIPAGRFAYPEEIAAAA 230
Query: 237 AFLCLSATSYVTGQVICVDGGYSVT 261
FL A + +TG+ + +DGGY++
Sbjct: 231 LFLASDAAAMITGENLVIDGGYTIQ 255
|
Length = 255 |
| >gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 136 bits (344), Expect = 4e-39
Identities = 82/252 (32%), Positives = 120/252 (47%), Gaps = 11/252 (4%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
L+G TAL+TGGT GIG + A GA V R+ L E L + D
Sbjct: 4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGD 63
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAG--TFIPKETTEFTEEDFSTVMTTNFESAYH 128
+ AQ+ L + ++ F G+L+ + NAG F P E ++ E F TN + Y
Sbjct: 64 --VAAQKA-LAQALAEAF-GRLDAVFINAGVAKFAPLE--DWDEAMFDRSFNTNVKGPYF 117
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
L Q PLL A +I+ S+ I +P S+YA+SK A+ L K L+ E IRV
Sbjct: 118 LIQALLPLL--ANPASIVLNGSINAHIGMPNSSVYAASKAALLSLAKTLSGELLPRGIRV 175
Query: 189 NTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRT-PMLRPGEPNEVSSVVAFLCLSATSYV 247
N V+P ++TPL + L+ + P+ R G P E++ V +L ++++
Sbjct: 176 NAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLASDESAFI 235
Query: 248 TGQVICVDGGYS 259
G I VDGG S
Sbjct: 236 VGSEIIVDGGMS 247
|
Length = 249 |
| >gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 136 bits (344), Expect = 4e-39
Identities = 83/252 (32%), Positives = 127/252 (50%), Gaps = 10/252 (3%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSV 68
L+G ++TGG+ G+G A+ A +V +E E N +E K G +
Sbjct: 4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVK 63
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYH 128
D+ + + L++T +F G L+++INNAG + E + ED++ V+ TN A+
Sbjct: 64 GDVTVESDVVNLIQTAVKEF-GTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFL 122
Query: 129 LSQLA-HPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
S+ A ++ GNII +SSV I P+ YA+SK + +T+ LA E+A IR
Sbjct: 123 GSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKGGVKLMTETLAMEYAPKGIR 182
Query: 188 VNTVAPWVIRTPLLDTVEK--DSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245
VN + P I TP+ EK D M+ PM G+P E+++V A+L S S
Sbjct: 183 VNNIGPGAINTPI--NAEKFADPKQRADVESMI---PMGYIGKPEEIAAVAAWLASSEAS 237
Query: 246 YVTGQVICVDGG 257
YVTG + DGG
Sbjct: 238 YVTGITLFADGG 249
|
Length = 261 |
| >gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 135 bits (342), Expect = 9e-39
Identities = 83/256 (32%), Positives = 123/256 (48%), Gaps = 10/256 (3%)
Query: 12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSK-GLQVSGSVC 69
KG ALVTG T GIG + LAA GA IV + E+ +K G++V
Sbjct: 1 KGKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVLYHGA 60
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
DL A E ++ QF G ++IL+NNAG +F E + ++ N + +H
Sbjct: 61 DLSKPAAIEDMVAYAQRQF-GGVDILVNNAGIQHVAPIEDFPTEKWDAIIALNLSAVFHT 119
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
++LA P +K G G II I+SV G++A S Y ++K + LTK +A E A + N
Sbjct: 120 TRLALPHMKKQGWGRIINIASVHGLVASANKSAYVAAKHGVVGLTKVVALETAGTGVTCN 179
Query: 190 TVAPWVIRTPLL-----DTVEKDSNFLEHANRMVLR--TPMLRPGEPNEVSSVVAFLCLS 242
+ P + TPL+ +K+ E A R +L P + P ++ FL
Sbjct: 180 AICPGWVLTPLVEKQISALAQKNGVPQEQAARELLLEKQPSKQFVTPEQLGDTAVFLASD 239
Query: 243 ATSYVTGQVICVDGGY 258
A S +TG + VDGG+
Sbjct: 240 AASQITGTAVSVDGGW 255
|
DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258 |
| >gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8 | Back alignment and domain information |
|---|
Score = 135 bits (341), Expect = 1e-38
Identities = 80/263 (30%), Positives = 120/263 (45%), Gaps = 30/263 (11%)
Query: 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGSVCD 70
+ L+TG IG A + L + GA + N L Q +E + +V D
Sbjct: 1 EDKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIALELD 60
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAG-----TFIPKETTEFTEEDFSTVMTTNFES 125
+ + ++L+E+ +F G+++ILINNA E EF E ++ V+ N
Sbjct: 61 ITSKESIKELIESYLEKF-GRIDILINNAYPSPKVWGSRFE--EFPYEQWNEVLNVNLGG 117
Query: 126 AYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIP-----------MCSIYASSKVAMNQLT 174
A+ SQ L K G G+II I+S+ GVIA P Y+ K + LT
Sbjct: 118 AFLCSQAFIKLFKKQGKGSIINIASIYGVIA-PDFRIYENTQMYSPVEYSVIKAGIIHLT 176
Query: 175 KNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSS 234
K LA +A IRVN ++P I + S FLE + + P+ R P ++
Sbjct: 177 KYLAKYYADTGIRVNAISPGGILNN------QPSEFLEKYTK---KCPLKRMLNPEDLRG 227
Query: 235 VVAFLCLSATSYVTGQVICVDGG 257
+ FL A+SYVTGQ + +DGG
Sbjct: 228 AIIFLLSDASSYVTGQNLVIDGG 250
|
This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Score = 134 bits (340), Expect = 1e-38
Identities = 88/255 (34%), Positives = 130/255 (50%), Gaps = 15/255 (5%)
Query: 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSV 68
+SL+G ALVTG G+G + LA GA + R +E ++ Q+ ++ G +
Sbjct: 1 FSLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGR--SEPSETQQQVEALGRRFLSLT 58
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYH 128
DL + L+++ +F G ++IL+NNAG + EF+E+D+ VM N +S +
Sbjct: 59 ADLSDIEAIKALVDSAVEEF-GHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFF 117
Query: 129 LSQL-AHPLLKSAGNGNIIFISSV---AGVIAIPMCSIYASSKVAMNQLTKNLACEWAKD 184
L+Q A LK G II I+S+ G I +P Y +SK A+ LTK LA EWA
Sbjct: 118 LTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPS---YTASKHAVAGLTKLLANEWAAK 174
Query: 185 KIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVL-RTPMLRPGEPNEVSSVVAFLCLSA 243
I VN +AP + T + D E N +L R P R G P+++ FL SA
Sbjct: 175 GINVNAIAPGYMATNNTQALRAD----EDRNAAILERIPAGRWGTPDDIGGPAVFLASSA 230
Query: 244 TSYVTGQVICVDGGY 258
+ YV G + VDGG+
Sbjct: 231 SDYVNGYTLAVDGGW 245
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248 |
| >gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 140 bits (354), Expect = 2e-38
Identities = 85/256 (33%), Positives = 131/256 (51%), Gaps = 19/256 (7%)
Query: 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC-DL 71
+TGG +GIG AV + AA G + R+ + + + L SV D+
Sbjct: 269 PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHL----SVQADI 324
Query: 72 KIRAQREKLMETVSSQFDGKLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHLS 130
A E + +++ G+L++L+NNAG K + E + EDF+ V N A+ +
Sbjct: 325 TDEAAVESAFAQIQARW-GRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACA 383
Query: 131 QLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNT 190
+ A L+ G I+ + S+A ++A+P + Y +SK A+ L+++LACEWA IRVNT
Sbjct: 384 RAAARLMSQGGV--IVNLGSIASLLALPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNT 441
Query: 191 VAPWVIRTP----LLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246
VAP I TP L + D + + R P+ R G+P EV+ +AFL A SY
Sbjct: 442 VAPGYIETPAVLALKASGRADF------DSIRRRIPLGRLGDPEEVAEAIAFLASPAASY 495
Query: 247 VTGQVICVDGGYSVTG 262
V G + VDGG++ G
Sbjct: 496 VNGATLTVDGGWTAFG 511
|
Length = 520 |
| >gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 134 bits (339), Expect = 2e-38
Identities = 79/254 (31%), Positives = 126/254 (49%), Gaps = 10/254 (3%)
Query: 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSV 68
+S+ G LVTGG++GIG + + GA V +R +E + G +
Sbjct: 2 FSVAGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELSAYG-ECIAIP 60
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYH 128
DL E L+ V+ + D +L++L+NNAG F E + VM N +S +
Sbjct: 61 ADLSSEEGIEALVARVAERSD-RLDVLVNNAGATWGAPLEAFPESGWDKVMDINVKSVFF 119
Query: 129 LSQLAHPLLKSAGN----GNIIFISSVAGVIAIPMCSI-YASSKVAMNQLTKNLACEWAK 183
L+Q PLL++A +I I S+AG++ + + Y +SK A++QLT+ LA E A
Sbjct: 120 LTQALLPLLRAAATAENPARVINIGSIAGIVVSGLENYSYGASKAAVHQLTRKLAKELAG 179
Query: 184 DKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243
+ I VN +AP + + + D LE + + P+ R G P +++ + L A
Sbjct: 180 EHITVNAIAPGRFPSKMTAFLLNDPAALEAEEKSI---PLGRWGRPEDMAGLAIMLASRA 236
Query: 244 TSYVTGQVICVDGG 257
+Y+TG VI VDGG
Sbjct: 237 GAYLTGAVIPVDGG 250
|
Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 133 bits (337), Expect = 5e-38
Identities = 82/258 (31%), Positives = 125/258 (48%), Gaps = 23/258 (8%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
LK A+VTGG++GIG AVV L G+ V E + D
Sbjct: 4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS------YNDVDYFK-----VD 52
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAG--TFIPKETTEFTEEDFSTVMTTNFESAYH 128
+ + Q K ++ V S++ G+++IL+NNAG ++ E E+++ ++ N +
Sbjct: 53 VSNKEQVIKGIDYVISKY-GRIDILVNNAGIESYGAIHAVE--EDEWDRIINVNVNGIFL 109
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
+S+ P + G II I+SV + Y +SK A+ LT+++A ++A IR
Sbjct: 110 MSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVDYAP-TIRC 168
Query: 189 NTVAPWVIRTPLLD-----TVEKDSNFLEHANRMVLRT-PMLRPGEPNEVSSVVAFLCLS 242
V P IRTPLL+ V KD +E R PM R G+P EV+ VVAFL
Sbjct: 169 VAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLASD 228
Query: 243 ATSYVTGQVICVDGGYSV 260
S++TG+ + VDGG
Sbjct: 229 LASFITGECVTVDGGLRA 246
|
Length = 258 |
| >gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 132 bits (335), Expect = 7e-38
Identities = 75/248 (30%), Positives = 118/248 (47%), Gaps = 16/248 (6%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
SL+G +TGG G+G A LAA GA V R L+Q + + L++ G
Sbjct: 4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGG--I 61
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
DL + ++ V+ QF G+L+ L+N AG F+ + + + + N ++ +
Sbjct: 62 DLVDPQAARRAVDEVNRQF-GRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNA 120
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
S+ A P L ++G G I+ I + A + A P YA++K + +LT+ LA E I VN
Sbjct: 121 SKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELLDRGITVN 180
Query: 190 TVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTG 249
V P +I TP D++F R P ++++V+AFL +TG
Sbjct: 181 AVLPSIIDTPPNRADMPDADF-------------SRWVTPEQIAAVIAFLLSDEAQAITG 227
Query: 250 QVICVDGG 257
I VDGG
Sbjct: 228 ASIPVDGG 235
|
Length = 239 |
| >gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 132 bits (335), Expect = 9e-38
Identities = 79/252 (31%), Positives = 119/252 (47%), Gaps = 9/252 (3%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
L G ALVTG ++GIG A+ + LA GA V SR + G + C
Sbjct: 5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALAC 64
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGT---FIPKETTEFTEEDFSTVMTTNFESA 126
+ Q + L + + G+L+IL+NNA F T+ F + N
Sbjct: 65 HIGEMEQIDALFAHIRERH-GRLDILVNNAAANPYFGHILDTD--LGAFQKTVDVNIRGY 121
Query: 127 YHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKI 186
+ +S A L+K G G+I+ ++SV GV IY+ +K A+ +TK A E A I
Sbjct: 122 FFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECAPFGI 181
Query: 187 RVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246
RVN + P + T + K+ L+ A + P+ R EP+E++ V +L A+SY
Sbjct: 182 RVNALLPGLTDTKFASALFKNDAILKQA---LAHIPLRRHAEPSEMAGAVLYLASDASSY 238
Query: 247 VTGQVICVDGGY 258
TG+ + VDGGY
Sbjct: 239 TTGECLNVDGGY 250
|
Length = 252 |
| >gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 131 bits (331), Expect = 2e-37
Identities = 83/253 (32%), Positives = 126/253 (49%), Gaps = 15/253 (5%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQ-VSGSV 68
G ALVTG KGIG A V+ LA GA V SR + +L+ ++E G++ V +
Sbjct: 4 DFAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVRE--CPGIEPVCVDL 61
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYH 128
D A E L G +++L+NNA I + E T+E F N + H
Sbjct: 62 SDWD--ATEEALGSV------GPVDLLVNNAAVAILQPFLEVTKEAFDRSFDVNVRAVIH 113
Query: 129 LSQLAHPLLKSAG-NGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
+SQ+ + + G G+I+ +SS A A+ ++Y S+K A++ LTK +A E KIR
Sbjct: 114 VSQIVARGMIARGVPGSIVNVSSQASQRALTNHTVYCSTKAALDMLTKVMALELGPHKIR 173
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
VN+V P V+ T + D E A +M+ R P+ + E +V + + FL +S
Sbjct: 174 VNSVNPTVVMTDMGRDNWSDP---EKAKKMLNRIPLGKFAEVEDVVNAILFLLSDKSSMT 230
Query: 248 TGQVICVDGGYSV 260
TG + VDGG+
Sbjct: 231 TGSTLPVDGGFLA 243
|
Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244 |
| >gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 131 bits (332), Expect = 3e-37
Identities = 89/257 (34%), Positives = 133/257 (51%), Gaps = 25/257 (9%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFG---AIVHTCSRNETELNQRIQEWKSKGLQVSGS 67
KG AL+TGGT+GIG A+ E G A+++ + NE + E + KG+
Sbjct: 5 FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAK------ELREKGVFTIK- 57
Query: 68 VCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAY 127
CD+ R Q +K E V +F G++++L+NNAG EF EE ++ ++ N A
Sbjct: 58 -CDVGNRDQVKKSKEVVEKEF-GRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAI 115
Query: 128 HLSQLAHPLLKSAGNGNIIFISSVAGV-IAIPMCSIYASSKVAMNQLTKNLACEWAKDKI 186
+ + PLLK + NG I+ I+S AG+ A + YA +K + LT+ LA E K I
Sbjct: 116 YTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTRRLAFELGKYGI 175
Query: 187 RVNTVAPWVIRTPLL------DTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC 240
RVN VAP + T + + EK N+ VL+T G+P +++++V FL
Sbjct: 176 RVNAVAPGWVETDMTLSGKSQEEAEKLRELFR--NKTVLKT----TGKPEDIANIVLFLA 229
Query: 241 LSATSYVTGQVICVDGG 257
Y+TGQVI DGG
Sbjct: 230 SDDARYITGQVIVADGG 246
|
Length = 255 |
| >gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 130 bits (329), Expect = 5e-37
Identities = 81/246 (32%), Positives = 117/246 (47%), Gaps = 16/246 (6%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLK 72
ALVTG K IG A+ E LAA G +VH +R+E E + E + DL
Sbjct: 2 VALVTGAAKRIGRAIAEALAAEGYRVVVH-YNRSEAEAQRLKDELNALRNSAVLVQADLS 60
Query: 73 IRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQL 132
A L+ F G+ ++L+NNA F P + +E+ ++ + N ++ Y L Q
Sbjct: 61 DFAACADLVAAAFRAF-GRCDVLVNNASAFYPTPLGQGSEDAWAELFGINLKAPYLLIQA 119
Query: 133 AHPLLKSAGNGNIIFISSVAGVIAIPMCSI-YASSKVAMNQLTKNLACEWAKDKIRVNTV 191
L + NG+II I A Y SK A+ LT++ A E A IRVN +
Sbjct: 120 FARRLAGSRNGSIINI-IDAMTDRPLTGYFAYCMSKAALEGLTRSAALELAP-NIRVNGI 177
Query: 192 APWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQV 251
AP +L + D+ + E+A R V P+ R E++ V FL S +Y+TGQ+
Sbjct: 178 AP----GLILLPEDMDAEYRENALRKV---PLKRRPSAEEIADAVIFLLDS--NYITGQI 228
Query: 252 ICVDGG 257
I VDGG
Sbjct: 229 IKVDGG 234
|
Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234 |
| >gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 130 bits (328), Expect = 1e-36
Identities = 78/263 (29%), Positives = 122/263 (46%), Gaps = 22/263 (8%)
Query: 14 MTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQV---SGSVC 69
ALVTGG +GIG + LAA G + ++ EL QE ++ G++V V
Sbjct: 3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVA 62
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPK--ETTEFTEEDFSTVMTTNFESAY 127
DL + E +++ + + G+++ L+NNAG + + + T E F V+ N +
Sbjct: 63 DL---SAHEAMLDAAQAAW-GRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPF 118
Query: 128 HLSQ------LAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEW 181
L+Q LA P + + +I+F+SSV ++ P Y SK ++ + A
Sbjct: 119 FLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYCISKAGLSMAAQLFAARL 178
Query: 182 AKDKIRVNTVAPWVIRTPLLDTV-EKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC 240
A++ I V V P +I+T + V K + PM R GEP +V+ VA L
Sbjct: 179 AEEGIGVYEVRPGLIKTDMTAPVTAKYDALIAKGL-----VPMPRWGEPEDVARAVAALA 233
Query: 241 LSATSYVTGQVICVDGGYSVTGF 263
Y TGQ I VDGG S+
Sbjct: 234 SGDLPYSTGQAIHVDGGLSIPRL 256
|
Length = 256 |
| >gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase | Back alignment and domain information |
|---|
Score = 127 bits (321), Expect = 1e-36
Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 8/171 (4%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETE--LNQRIQEWKSKGLQVSGSVCDL 71
T L+TGGT G+G A+ LAA GA + SR + + E ++ G +V+ + CD+
Sbjct: 2 TVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTVAACDV 61
Query: 72 KIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQ 131
R L+ + + G L+ +++NAG E T E F V+ A++L +
Sbjct: 62 ADRDALAALLAALPAAL-GPLDGVVHNAGVLDDGPLEELTPERFERVLAPKVTGAWNLHE 120
Query: 132 LAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWA 182
L L G + SSVAGV+ P + YA++ A++ L ++ E
Sbjct: 121 LTRDL----DLGAFVLFSSVAGVLGSPGQANYAAANAALDALAEHRRAEGL 167
|
This family contains a wide variety of dehydrogenases. Length = 167 |
| >gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR | Back alignment and domain information |
|---|
Score = 128 bits (324), Expect = 4e-36
Identities = 77/251 (30%), Positives = 124/251 (49%), Gaps = 9/251 (3%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR 74
ALVTG T GIG A+ L G V C+R E L ++E + G++ G CD++
Sbjct: 5 VALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAGVEADGRTCDVRSV 64
Query: 75 AQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQ--L 132
+ E L+ +++ G +++L+NNAG T E +E + V+ TN + +++ L
Sbjct: 65 PEIEALVAAAVARY-GPIDVLVNNAGRSGGGATAELADELWLDVVETNLTGVFRVTKEVL 123
Query: 133 AHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVA 192
+ G G II I+S G + + Y++SK + TK L E A+ I VN V
Sbjct: 124 KAGGMLERGTGRIINIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVC 183
Query: 193 PWVIRTPLLDTVEK------DSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246
P + TP+ +V + + + E +R+ R P+ R P EV+ +VA+L +
Sbjct: 184 PGFVETPMAASVREHYADIWEVSTEEAFDRITARVPLGRYVTPEEVAGMVAYLIGDGAAA 243
Query: 247 VTGQVICVDGG 257
VT Q + V GG
Sbjct: 244 VTAQALNVCGG 254
|
Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258 |
| >gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Score = 127 bits (321), Expect = 7e-36
Identities = 72/248 (29%), Positives = 121/248 (48%), Gaps = 13/248 (5%)
Query: 15 TALVTGGTKGIGYAVVEELAAFG----AIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
ALVTG +GIG A+ EL G A + + + + + + V D
Sbjct: 4 IALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTD 63
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
+ A+ +E + +G ++IL+NNAG + ++++ V+ TN S ++++
Sbjct: 64 TEECAEALAEIE----EEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVT 119
Query: 131 QLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNT 190
Q + G G II ISSV G+ + Y+++K M TK LA E A+ I VN
Sbjct: 120 QPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIGFTKALASEGARYGITVNC 179
Query: 191 VAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQ 250
+AP I TP+++ + + +V + PM R G P E+++ VAFL A ++TG+
Sbjct: 180 IAPGYIATPMVEQMGPEVL-----QSIVNQIPMKRLGTPEEIAAAVAFLVSEAAGFITGE 234
Query: 251 VICVDGGY 258
I ++GG
Sbjct: 235 TISINGGL 242
|
Length = 245 |
| >gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 127 bits (321), Expect = 1e-35
Identities = 75/251 (29%), Positives = 131/251 (52%), Gaps = 6/251 (2%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
L G TAL+TG +GIG + A GA + + E+ + E +G + + V D
Sbjct: 4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISP-EIEKLADELCGRGHRCTAVVAD 62
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
++ A ++ + G+++IL+NNAG + ++ED + N + ++++
Sbjct: 63 VRDPASVAAAIKRAKEKE-GRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVT 121
Query: 131 QLAHPLLKSAGNGNIIFISSVAG-VIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
+ P + + +G I+ +SSV G ++A P + YA +K A+ LTK+LA E+A+ IRVN
Sbjct: 122 KAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVN 181
Query: 190 TVAPWVIRTPLLDTVEKDSNFLEHA---NRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246
+ P +RTP+ +++ + SN + M P+ R +P EV + AFL +SY
Sbjct: 182 AICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLASDESSY 241
Query: 247 VTGQVICVDGG 257
+TG +DGG
Sbjct: 242 LTGTQNVIDGG 252
|
Length = 263 |
| >gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family | Back alignment and domain information |
|---|
Score = 126 bits (318), Expect = 3e-35
Identities = 75/264 (28%), Positives = 125/264 (47%), Gaps = 18/264 (6%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGA-------------IVHTCSRNETELNQRIQEW 57
L+G A +TG +G G A LAA GA +L++ +
Sbjct: 1 LEGKVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLV 60
Query: 58 KSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFST 117
++ G +V D++ A+ ++E QF G+L++++ NAG + E +EE + T
Sbjct: 61 EALGRKVLARKADVRDLAEVRAVVEDGVEQF-GRLDVVVANAGVLSYGRSWELSEEQWDT 119
Query: 118 VMTTNFESAYHLSQLAHPLLKSAGNG-NIIFISSVAGVIAIPMCSIYASSKVAMNQLTKN 176
V+ N + + P + GNG +II SSVAG+ A+P + YA++K + LTK
Sbjct: 120 VLDINLTGVWRTCKAVVPHMIERGNGGSIIITSSVAGLKALPGLAHYAAAKHGLVGLTKT 179
Query: 177 LACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRM-VLRTPMLRPG--EPNEVS 233
LA E A+ IRVN++ P+ + TP++ FL++ + G P +V+
Sbjct: 180 LANELAEYGIRVNSIHPYSVDTPMIAPEAMREAFLKYPEAARAFMPALPVSGFVPPEDVA 239
Query: 234 SVVAFLCLSATSYVTGQVICVDGG 257
V +L + Y+TG + VD G
Sbjct: 240 DAVLWLASDESRYITGHQLPVDAG 263
|
Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265 |
| >gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12 | Back alignment and domain information |
|---|
Score = 125 bits (316), Expect = 5e-35
Identities = 77/250 (30%), Positives = 113/250 (45%), Gaps = 7/250 (2%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
L+G A+VTG GIG A LA GA V + + + L + V D
Sbjct: 1 LEGKVAIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQIAGGALALRVDVTD 60
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAG-TFIPKETTEFTEEDFSTVMTTNFESAYHL 129
Q L E +F G L++L+NNAG + + + M N +
Sbjct: 61 ---EQQVAALFERAVEEF-GGLDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGTFLC 116
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
+ A P + + G G+I+ +SS+AG P Y +SK A+ LT+ LA E IR N
Sbjct: 117 CRHAAPRMIARGGGSIVNLSSIAGQSGDPGYGAYGASKAAIRNLTRTLAAELRHAGIRCN 176
Query: 190 TVAPWVIRTPLLDT--VEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
+AP +I TPLL + +++ R G P +V++ V FL S++
Sbjct: 177 ALAPGLIDTPLLLAKLAGFEGALGPGGFHLLIHQLQGRLGRPEDVAAAVVFLLSDDASFI 236
Query: 248 TGQVICVDGG 257
TGQV+CVDGG
Sbjct: 237 TGQVLCVDGG 246
|
These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246 |
| >gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 125 bits (316), Expect = 5e-35
Identities = 78/255 (30%), Positives = 119/255 (46%), Gaps = 16/255 (6%)
Query: 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLK 72
G ALVTGG GIG A+ + LAA GA V + E+ +++ E G + G CD+
Sbjct: 1 GKVALVTGGASGIGLAIAKRLAAEGAAVVVADIDP-EIAEKVAEAAQGGPRALGVQCDVT 59
Query: 73 IRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQL 132
AQ + E +F G L+I+++NAG E + ED++ M N + +S+
Sbjct: 60 SEAQVQSAFEQAVLEFGG-LDIVVSNAGIATSSPIAETSLEDWNRSMDINLTGHFLVSRE 118
Query: 133 AHPLLKSAG-NGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTV 191
A ++KS G GNI+F +S V P + Y+++K A L + LA E +D IRVNTV
Sbjct: 119 AFRIMKSQGIGGNIVFNASKNAVAPGPNAAAYSAAKAAEAHLARCLALEGGEDGIRVNTV 178
Query: 192 APWVIRTPLLDT---------VEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS 242
P + E+ R +L+ +L P +V+ V +
Sbjct: 179 NPDAVFRGSKIWEGVWRAARAKAYGLLEEEYRTRNLLKREVL----PEDVAEAVVAMASE 234
Query: 243 ATSYVTGQVICVDGG 257
TG ++ VDGG
Sbjct: 235 DFGKTTGAIVTVDGG 249
|
This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Score = 125 bits (315), Expect = 5e-35
Identities = 82/244 (33%), Positives = 124/244 (50%), Gaps = 11/244 (4%)
Query: 17 LVTGGTKGIGYAVVEELAA--FGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR 74
LVTG ++GIG A+ LAA F VH ++ + +++G D+ R
Sbjct: 2 LVTGASRGIGRAIANRLAADGFEICVH-YHSGRSDAESVVSAIQAQGGNARLLQFDVADR 60
Query: 75 AQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQ-LA 133
L+E ++ G ++ NAG +EED+ V+ TN + Y++
Sbjct: 61 VACRTLLEADIAE-HGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCT 119
Query: 134 HPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAP 193
P++++ G II ++SV+GV+ Y+++K + TK LA E AK KI VN +AP
Sbjct: 120 MPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAP 179
Query: 194 WVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVIC 253
+I T +L VE D L+ A + V PM R G+P EV+S+ FL SYVT QVI
Sbjct: 180 GLIDTEMLAEVEHD---LDEALKTV---PMNRMGQPAEVASLAGFLMSDGASYVTRQVIS 233
Query: 254 VDGG 257
V+GG
Sbjct: 234 VNGG 237
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239 |
| >gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 124 bits (313), Expect = 9e-35
Identities = 62/188 (32%), Positives = 90/188 (47%), Gaps = 16/188 (8%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAI-VHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKI 73
ALVTG +GIG+ +V +LA G V +R+ +++ +++GL V D+
Sbjct: 2 VALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVRFHQLDVTD 61
Query: 74 RAQREKLMETVSSQFDGKLNILINNAGTFI-----PKETTEFTEEDFSTVMTTNFESAYH 128
A E + V ++ G L+IL+NNAG T E E M TNF
Sbjct: 62 DASIEAAADFVEEKY-GGLDILVNNAGIAFKGFDDSTPTREQARE----TMKTNFFGTVD 116
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
++Q PLLK + G I+ +SS G + Y SK A+N LT+ LA E + I+V
Sbjct: 117 VTQALLPLLKKSPAGRIVNVSSGLGSLTSA----YGVSKAALNALTRILAKELKETGIKV 172
Query: 189 NTVAP-WV 195
N P WV
Sbjct: 173 NACCPGWV 180
|
PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225 |
| >gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 123 bits (312), Expect = 2e-34
Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 6/191 (3%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLK-I 73
L+TG + GIG A+ LAA G V +RN +L + + V D + I
Sbjct: 2 VVLITGCSSGIGLALALALAAQGYRVIATARNPDKLESLGELLNDNLEVLELDVTDEESI 61
Query: 74 RAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLA 133
+A ++++E G++++L+NNAG + E + E+ + N +++
Sbjct: 62 KAAVKEVIE-----RFGRIDVLVNNAGYGLFGPLEETSIEEVRELFEVNVFGPLRVTRAF 116
Query: 134 HPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAP 193
PL++ G+G I+ +SSVAG++ P Y +SK A+ L+++L E A I+V + P
Sbjct: 117 LPLMRKQGSGRIVNVSSVAGLVPTPFLGPYCASKAALEALSESLRLELAPFGIKVTIIEP 176
Query: 194 WVIRTPLLDTV 204
+RT D
Sbjct: 177 GPVRTGFADNA 187
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248 |
| >gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Score = 124 bits (313), Expect = 2e-34
Identities = 56/208 (26%), Positives = 99/208 (47%), Gaps = 2/208 (0%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGSVC 69
+KG TAL+TG + GIG + ++LA G + +R E +L +E + K G++V
Sbjct: 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPA 63
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
DL E+L + + + G +++L+NNAG E + ++ ++ N + L
Sbjct: 64 DLSDPEALERLEDELKERG-GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRL 122
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
++ P + G G+II I S AG+I P ++Y+++K + ++ L E ++V
Sbjct: 123 TKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELKGTGVKVT 182
Query: 190 TVAPWVIRTPLLDTVEKDSNFLEHANRM 217
V P RT D D L +
Sbjct: 183 AVCPGPTRTEFFDAKGSDVYLLSPGELV 210
|
Length = 265 |
| >gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 123 bits (311), Expect = 2e-34
Identities = 72/252 (28%), Positives = 129/252 (51%), Gaps = 14/252 (5%)
Query: 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDL 71
G AL+T +GIG A+ A GA V T++N+ + +G ++ V D+
Sbjct: 1 DGKVALITAAAQGIGRAIALAFAREGANVIA-----TDINEEKLKELERGPGITTRVLDV 55
Query: 72 KIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETT-EFTEEDFSTVMTTNFESAYHLS 130
+ Q L + G++++L N AG F+ + + ++D+ M N S Y +
Sbjct: 56 TDKEQVAALAKEE-----GRIDVLFNCAG-FVHHGSILDCEDDDWDFAMNLNVRSMYLMI 109
Query: 131 QLAHPLLKSAGNGNIIFISSVAGVI-AIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
+ P + + +G+II +SSVA I +P +Y+++K A+ LTK++A ++A+ IR N
Sbjct: 110 KAVLPKMLARKDGSIINMSSVASSIKGVPNRFVYSTTKAAVIGLTKSVAADFAQQGIRCN 169
Query: 190 TVAPWVIRTPLLDTVEKDSNFLEHANR-MVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248
+ P + TP L+ + E A + R P+ R P EV+++ +L ++YVT
Sbjct: 170 AICPGTVDTPSLEERIQAQPDPEEALKAFAARQPLGRLATPEEVAALAVYLASDESAYVT 229
Query: 249 GQVICVDGGYSV 260
G + +DGG+S+
Sbjct: 230 GTAVVIDGGWSL 241
|
Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241 |
| >gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 123 bits (312), Expect = 3e-34
Identities = 71/263 (26%), Positives = 126/263 (47%), Gaps = 26/263 (9%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
G +V GGT GI + + A GA V SR++ +++ + + + G + G D
Sbjct: 7 FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSAD 66
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNA-GTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
++ A E ++ +F G +++L++ A G F P + F TV+ + +++
Sbjct: 67 VRDYAAVEAAFAQIADEF-GPIDVLVSGAAGNF-PAPAAGMSANGFKTVVDIDLLGTFNV 124
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
+ A+PLL+ G +II IS+ + +PM + ++K ++ LT+ LA EW + IRVN
Sbjct: 125 LKAAYPLLRRPG-ASIIQISAPQAFVPMPMQAHVCAAKAGVDMLTRTLALEWGPEGIRVN 183
Query: 190 TVAPWVIRTPLLDTVEKDSNFLEHANRM----------VLRTPMLRPGEPNEVSSVVAFL 239
++ P P+ T E R+ P+ R G ++++ FL
Sbjct: 184 SIVP----GPIAGT--------EGMARLAPSPELQAAVAQSVPLKRNGTKQDIANAALFL 231
Query: 240 CLSATSYVTGQVICVDGGYSVTG 262
SY+TG V+ VDGG+S+ G
Sbjct: 232 ASDMASYITGVVLPVDGGWSLGG 254
|
Length = 264 |
| >gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 123 bits (311), Expect = 3e-34
Identities = 79/249 (31%), Positives = 121/249 (48%), Gaps = 7/249 (2%)
Query: 17 LVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWK--SKGLQVSGSVCDLKIR 74
L+TGG G+G A LA GA + NE L + +V D+
Sbjct: 7 LITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIKADVSDE 66
Query: 75 AQREKLMETVSSQFDGKLNILINNAGTFIPKETTE-FTEEDFSTVMTTNFESAYHLSQLA 133
AQ E ++ QF G+++ NNAG + TE F ++F V++ N ++ +
Sbjct: 67 AQVEAYVDATVEQF-GRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSINLRGVFYGLEKV 125
Query: 134 HPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAP 193
+++ G+G I+ +SV G+ + S YA++K + LT+N A E+ + IR+N +AP
Sbjct: 126 LKVMREQGSGMIVNTASVGGIRGVGNQSGYAAAKHGVVGLTRNSAVEYGQYGIRINAIAP 185
Query: 194 WVIRTPLLDTVEKD---SNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQ 250
I TP+++ K N E V PM R GEP EV++VVAFL YV
Sbjct: 186 GAILTPMVEGSLKQLGPENPEEAGEEFVSVNPMKRFGEPEEVAAVVAFLLSDDAGYVNAA 245
Query: 251 VICVDGGYS 259
V+ +DGG S
Sbjct: 246 VVPIDGGQS 254
|
Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 123 bits (310), Expect = 4e-34
Identities = 78/251 (31%), Positives = 117/251 (46%), Gaps = 17/251 (6%)
Query: 16 ALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKG---LQVSGSVCDL 71
ALVTG ++GIG A+ LA G I +R+ + +E ++ G L V +V
Sbjct: 7 ALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANV--- 63
Query: 72 KIRAQREKLMETVSSQFD---GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYH 128
EK+ E + Q D G+L++ +NNA + + + E E + M N ++
Sbjct: 64 ---GDVEKIKEMFA-QIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLF 119
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
+Q A L++ G G II +SS+ + + + SK A+ LT+ LA E A I V
Sbjct: 120 CAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAALEALTRYLAVELAPKGIAV 179
Query: 189 NTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248
N V+ + T L LE A +TP R EP +V++ V FLC +
Sbjct: 180 NAVSGGAVDTDALKHFPNREELLEDARA---KTPAGRMVEPEDVANAVLFLCSPEADMIR 236
Query: 249 GQVICVDGGYS 259
GQ I VDGG S
Sbjct: 237 GQTIIVDGGRS 247
|
Length = 250 |
| >gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 123 bits (310), Expect = 6e-34
Identities = 83/270 (30%), Positives = 134/270 (49%), Gaps = 28/270 (10%)
Query: 1 MSDFREQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK 60
MS F E L G ALVTGGTKGIG A V L GA V T +R+ + E+ +
Sbjct: 1 MSFFLE----LAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDLPEGVEFVAA 56
Query: 61 GL-QVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAG--TFIPKETTEFTEEDFST 117
L G C RA E+L G ++IL++ G + T+E++
Sbjct: 57 DLTTAEG--CAAVARAVLERL---------GGVDILVHVLGGSSAPAGGFAALTDEEWQD 105
Query: 118 VMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSI-YASSKVAMNQLTKN 176
+ N +A L + P + + G+G II ++S+ + +P + YA++K A++ +K+
Sbjct: 106 ELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAALSTYSKS 165
Query: 177 LACEWAKDKIRVNTVAPWVIRTP----LLDTVEKDSNF-LEHANRMVLRT----PMLRPG 227
L+ E A +RVNTV+P I T L + + + + E A ++++ + P+ RP
Sbjct: 166 LSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPA 225
Query: 228 EPNEVSSVVAFLCLSATSYVTGQVICVDGG 257
EP EV+ ++AFL + +TG +DGG
Sbjct: 226 EPEEVAELIAFLASDRAASITGTEYVIDGG 255
|
Length = 260 |
| >gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 122 bits (309), Expect = 6e-34
Identities = 74/250 (29%), Positives = 123/250 (49%), Gaps = 8/250 (3%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVH-TCSRNETELNQRIQEWKSKGLQVSGSVCDLKI 73
A+VT GIG A LA G + T +E + +E +S G++ DL
Sbjct: 4 VAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSD 63
Query: 74 RAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLA 133
+ + ++ + + G++++L+NNAG + +++ + T + + A+ SQ+A
Sbjct: 64 LPEGAQALDKLIQRL-GRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIA 122
Query: 134 -HPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVA 192
++K G II I+SV +P S Y ++K A+ LTK +A E + I VN VA
Sbjct: 123 ARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALELVEHGILVNAVA 182
Query: 193 PWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVI 252
P I TP+ + D P+ RPG+ +E++S+VA+LC SY TGQ +
Sbjct: 183 PGAIATPMNGMDDSDVKPDSRPG-----IPLGRPGDTHEIASLVAWLCSEGASYTTGQSL 237
Query: 253 CVDGGYSVTG 262
VDGG+ +
Sbjct: 238 IVDGGFMLAN 247
|
Length = 256 |
| >gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 123 bits (310), Expect = 7e-34
Identities = 78/254 (30%), Positives = 128/254 (50%), Gaps = 13/254 (5%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
L+ A++TG + GIG A LA GA V +++ + + KS G + D
Sbjct: 4 LENKVAVITGASTGIGQASAIALAQEGAYV-LAVDIAEAVSETVDKIKSNGGKAKAYHVD 62
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGT-FIPKETTEFTEEDFSTVMTTNFESAYHL 129
+ Q + + QF G++++L NNAG E+ + F +M + + +
Sbjct: 63 ISDEQQVKDFASEIKEQF-GRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLM 121
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
+++ PL+ G G+II SS +G A S Y ++K A+ TK++A E+ +D IR N
Sbjct: 122 TKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIAIEYGRDGIRAN 180
Query: 190 TVAPWVIRTPLLDTV------EKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243
+AP I TPL+D + E F E + + TP+ R G+P EV+ +V FL
Sbjct: 181 AIAPGTIETPLVDKLTGTSEDEAGKTFRE-NQKWM--TPLGRLGKPEEVAKLVVFLASDD 237
Query: 244 TSYVTGQVICVDGG 257
+S++TG+ I +DGG
Sbjct: 238 SSFITGETIRIDGG 251
|
Length = 272 |
| >gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 122 bits (308), Expect = 8e-34
Identities = 76/253 (30%), Positives = 124/253 (49%), Gaps = 9/253 (3%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSV-C 69
L G A++TGG GIG A A GA V ++ + Q + G V C
Sbjct: 2 LDGKVAIITGGASGIGEATARLFAKHGARVVIADIDD-DAGQAVA--AELGDPDISFVHC 58
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETT--EFTEEDFSTVMTTNFESAY 127
D+ + A ++T ++F G+L+I+ NNAG + E + E+F V+ N A+
Sbjct: 59 DVTVEADVRAAVDTAVARF-GRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVYGAF 117
Query: 128 HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
++ A ++ A G+I+ ++SVAGV+ Y +SK A+ LT++ A E + IR
Sbjct: 118 LGTKHAARVMIPAKKGSIVSVASVAGVVGGLGPHAYTASKHAVLGLTRSAATELGEHGIR 177
Query: 188 VNTVAPWVIRTPLL-DTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246
VN V+P+ + TPLL + +E A R P ++++ V +L + Y
Sbjct: 178 VNCVSPYGVATPLLTAGFGVEDEAIEEAVRG-AANLKGTALRPEDIAAAVLYLASDDSRY 236
Query: 247 VTGQVICVDGGYS 259
V+GQ + VDGG +
Sbjct: 237 VSGQNLVVDGGLT 249
|
Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249 |
| >gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 121 bits (305), Expect = 1e-33
Identities = 64/184 (34%), Positives = 100/184 (54%), Gaps = 3/184 (1%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
SLKG AL+TGG+KGIG+A+ E L A G V +R++ EL + E +KG V G
Sbjct: 3 SLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKG-NVLGLAA 61
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
D++ A ++ ++ + + F G L++LI NAG E T E++ V+ TN A++
Sbjct: 62 DVRDEADVQRAVDAIVAAF-GGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYT 120
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
+ A P LK G G II ISS+AG + Y +SK + ++ + + I+V+
Sbjct: 121 IKAAVPALKRGG-GYIINISSLAGTNFFAGGAAYNASKFGLVGFSEAAMLDLRQYGIKVS 179
Query: 190 TVAP 193
T+ P
Sbjct: 180 TIMP 183
|
Length = 237 |
| >gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR | Back alignment and domain information |
|---|
Score = 121 bits (306), Expect = 2e-33
Identities = 60/191 (31%), Positives = 99/191 (51%), Gaps = 5/191 (2%)
Query: 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK----GLQVSGSV 68
G L+TGG+ GIG A+ +EL GA V +R+E++L + ++E +++ G +VS
Sbjct: 1 GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYIS 60
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYH 128
DL + E+ + G ++++N AG IP + T E+F M N+ + +
Sbjct: 61 ADLSDYEEVEQAFAQAVEKG-GPPDLVVNCAGISIPGLFEDLTAEEFERGMDVNYFGSLN 119
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
++ PL+K G+I+F+SS A ++ I S Y SK A+ L ++L E IRV
Sbjct: 120 VAHAVLPLMKEQRPGHIVFVSSQAALVGIYGYSAYCPSKFALRGLAESLRQELKPYNIRV 179
Query: 189 NTVAPWVIRTP 199
+ V P TP
Sbjct: 180 SVVYPPDTDTP 190
|
These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239 |
| >gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated | Back alignment and domain information |
|---|
Score = 121 bits (306), Expect = 2e-33
Identities = 79/253 (31%), Positives = 116/253 (45%), Gaps = 16/253 (6%)
Query: 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRA 75
ALVTG +GIG+A+ + L G V NE + G + D+ R
Sbjct: 5 ALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRD 64
Query: 76 QREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHP 135
Q + V F G LN+++NNAG TEE F V N Q A
Sbjct: 65 QVFAAVRQVVDTF-GDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQE 123
Query: 136 LLKSAGNG-NIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPW 194
K G+G II +S AGV+ P ++Y+S+K A+ LT+ A + A + I VN AP
Sbjct: 124 AFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPG 183
Query: 195 VIRTPLLDTVE--------KDSNF--LEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244
+++TP++ + K + + A + L R EP +V++ V+FL +
Sbjct: 184 IVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLG----RLSEPEDVANCVSFLAGPDS 239
Query: 245 SYVTGQVICVDGG 257
Y+TGQ I VDGG
Sbjct: 240 DYITGQTIIVDGG 252
|
Length = 256 |
| >gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 120 bits (304), Expect = 3e-33
Identities = 84/262 (32%), Positives = 131/262 (50%), Gaps = 22/262 (8%)
Query: 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGS 67
+SLK +VTG +GIG A+ LA G+ +V + E+N+ ++ K G + G
Sbjct: 2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGV 61
Query: 68 VCDLKIRAQREKLMETVSSQFDGKLNILINNAGT--FIPKETTEFTEEDFSTV---MTTN 122
+ D+ R E L + ++ +IL+NNAG F P F D + ++T+
Sbjct: 62 LADVSTREGCETLAKATIDRYGV-ADILVNNAGLGLFSP-----FLNVDDKLIDKHISTD 115
Query: 123 FESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWA 182
F+S + SQ ++ G I+ I+SVAG+ SIY + K A+ LTK LA E A
Sbjct: 116 FKSVIYCSQELAKEMREGGA--IVNIASVAGIRPAYGLSIYGAMKAAVINLTKYLALELA 173
Query: 183 KDKIRVNTVAPWVIRTPLLDTVEKDSNFLE--HANRMVLRTPMLRPGEPNEVSSVVAFLC 240
KIRVN +AP ++T L +++ K E A + L +L +P EV+ VA +
Sbjct: 174 P-KIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKIL---DPEEVAEFVAAIL 229
Query: 241 LSATSYVTGQVICVDGGYSVTG 262
+ +TGQV +D G S+ G
Sbjct: 230 KIES--ITGQVFVLDSGESLKG 249
|
Length = 252 |
| >gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 121 bits (305), Expect = 3e-33
Identities = 76/275 (27%), Positives = 123/275 (44%), Gaps = 38/275 (13%)
Query: 9 W-SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETEL-NQRIQEWKSKGLQVSG 66
W +L+G +VTGG+ GIG A+V+EL A GA V + + ++ Q
Sbjct: 4 WLNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQHENYQFVP-------- 55
Query: 67 SVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETT---------EFTEEDFST 117
D+ + + + +F G+++ L+NNAG IP+ E E F
Sbjct: 56 --TDVSSAEEVNHTVAEIIEKF-GRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDK 112
Query: 118 VMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNL 177
+ N + + +SQ + +G I+ +SS AG+ S YA++K A+N T++
Sbjct: 113 MFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTRSW 172
Query: 178 ACEWAKDKIRVNTVAPWVI-----RTPLLDTVEKDSNFLEHANRMVLR--------TPML 224
A E K IRV VAP ++ RTP E+ + LR P+
Sbjct: 173 AKELGKHNIRVVGVAPGILEATGLRTP---EYEEALAYTRGITVEQLRAGYTKTSTIPLG 229
Query: 225 RPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYS 259
R G+ +EV+ +V +L SY+TG + GG +
Sbjct: 230 RSGKLSEVADLVCYLLSDRASYITGVTTNIAGGKT 264
|
Length = 266 |
| >gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | Back alignment and domain information |
|---|
Score = 120 bits (303), Expect = 5e-33
Identities = 68/250 (27%), Positives = 118/250 (47%), Gaps = 12/250 (4%)
Query: 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRA 75
LVTG +GIGYAV LA GA V RN +L + + + + G + D+ A
Sbjct: 1 VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFATYKLDVADSA 60
Query: 76 QREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHP 135
+++++ + ++ G +++L+N AG ++ED+ N +++SQ P
Sbjct: 61 AVDEVVQRLEREY-GPIDVLVNVAGILRLGAIDSLSDEDWQATFAVNTFGVFNVSQAVSP 119
Query: 136 LLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWV 195
+K +G I+ + S A + + YA+SK A+ LTK L E A IR N V+P
Sbjct: 120 RMKRRRSGAIVTVGSNAANVPRMGMAAYAASKAALTMLTKCLGLELAPYGIRCNVVSPGS 179
Query: 196 IRTPLLDTVEKDSNFLEHANRMV--------LRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
T + + D +++ L P+ + EP+++++ V FL S++
Sbjct: 180 TDTEMQRQLWNDEY---GEQQVIAGSPEQFRLGIPLGKIAEPSDIANAVLFLASDLASHI 236
Query: 248 TGQVICVDGG 257
T + VDGG
Sbjct: 237 TMHDLVVDGG 246
|
Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250 |
| >gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR | Back alignment and domain information |
|---|
Score = 120 bits (303), Expect = 5e-33
Identities = 68/258 (26%), Positives = 118/258 (45%), Gaps = 14/258 (5%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-LNQRIQEWKSKGLQVSGSVCDLKI 73
A+VTG ++GIG A+ ELAA G + + + + + E + G + D+
Sbjct: 3 VAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAIYFQADIGE 62
Query: 74 RAQREKLMETVSSQFDGKLNILINNAGTFIPKETT--EFTEEDFSTVMTTNFESAYHLSQ 131
+ E L++ F G+L+ L+NNAG + + TE+ F ++ N + L+Q
Sbjct: 63 LSDHEALLDQAWEDF-GRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRGPFFLTQ 121
Query: 132 ------LAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDK 185
+ P + +IIF++S+ + P Y SK ++ T+ LA A +
Sbjct: 122 AVARRMVEQPDRFDGPHRSIIFVTSINAYLVSPNRGEYCISKAGLSMATRLLAYRLADEG 181
Query: 186 IRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245
I V+ + P +I T + V++ + L A P+ R G+P +++ V L
Sbjct: 182 IAVHEIRPGLIHTDMTAPVKEKYDELIAAG----LVPIRRWGQPEDIAKAVRTLASGLLP 237
Query: 246 YVTGQVICVDGGYSVTGF 263
Y TGQ I +DGG S+
Sbjct: 238 YSTGQPINIDGGLSMRRL 255
|
This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255 |
| >gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 120 bits (303), Expect = 6e-33
Identities = 79/261 (30%), Positives = 113/261 (43%), Gaps = 28/261 (10%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
LK +VTGG GIG A+ LA GAI R+ + ++ +E ++ + D
Sbjct: 5 LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPD-DEFAEELRALQPRAEFVQVD 63
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
L AQ +E ++F G+++ L+NNAG E E F + N Y ++
Sbjct: 64 LTDDAQCRDAVEQTVAKF-GRIDGLVNNAGVN-DGVGLEAGREAFVASLERNLIHYYVMA 121
Query: 131 QLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNT 190
P LK A G I+ ISS + S YA++K A LT+ A AKD +RVN
Sbjct: 122 HYCLPHLK-ASRGAIVNISSKTALTGQGGTSGYAAAKGAQLALTREWAVALAKDGVRVNA 180
Query: 191 VAPWVIRTPL----LDTVE---------KDSNFLEHANRMVLRTPMLRPGEPNEVSSVVA 237
V P + TPL + T + L H RM E++
Sbjct: 181 VIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGH--RMT---------TAEEIADTAV 229
Query: 238 FLCLSATSYVTGQVICVDGGY 258
FL +S+ TGQ + VDGGY
Sbjct: 230 FLLSERSSHTTGQWLFVDGGY 250
|
Length = 258 |
| >gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 119 bits (299), Expect = 1e-32
Identities = 77/252 (30%), Positives = 120/252 (47%), Gaps = 14/252 (5%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNET---ELNQRIQEWKSKGLQVSG 66
L A+VTG ++GIG A+ LAA G A+ + + EL I+ + + V
Sbjct: 3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQA 62
Query: 67 SVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESA 126
V D A +L + + F G++++L+NNAG +F EDF + TN A
Sbjct: 63 DVAD---AAAVTRLFDAAETAF-GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGA 118
Query: 127 YHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKI 186
+ + + A L G II +S+ + +P YA+SK A+ L LA E I
Sbjct: 119 FVVLREAARHLGQGGR--IINLSTSVIALPLPGYGPYAASKAAVEGLVHVLANELRGRGI 176
Query: 187 RVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246
VN VAP + T L K + ++ + P+ R G P E+++ VAFL ++
Sbjct: 177 TVNAVAPGPVATELFFN-GKSAEQIDQLAGLA---PLERLGTPEEIAAAVAFLAGPDGAW 232
Query: 247 VTGQVICVDGGY 258
V GQV+ V+GG+
Sbjct: 233 VNGQVLRVNGGF 244
|
Length = 245 |
| >gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 119 bits (299), Expect = 2e-32
Identities = 74/258 (28%), Positives = 115/258 (44%), Gaps = 17/258 (6%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
+G +VTG +GIG V E LA GA V R+E E + G D
Sbjct: 2 FEGKVVVVTGAAQGIGRGVAERLAGEGARVLLVDRSELVHEVL-AEILAAGDAAHVHTAD 60
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAG-TFIPKETTEFTEEDFSTVMTTNFESAYHL 129
L+ A + ++ +F G++++LINN G T K + EE + +
Sbjct: 61 LETYAGAQGVVRAAVERF-GRVDVLINNVGGTIWAKPYEHYEEEQIEAEIRRSLFPTLWC 119
Query: 130 SQLAHPLLKSAGNGNIIFISSVA--GVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
+ P + G I+ +SS+A G+ IP Y+++K +N LT +LA E A+D IR
Sbjct: 120 CRAVLPHMLERQQGVIVNVSSIATRGIYRIP----YSAAKGGVNALTASLAFEHARDGIR 175
Query: 188 VNTVAP-------WVI-RTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFL 239
VN VAP I R + ++ + ++ + + M R G +E + FL
Sbjct: 176 VNAVAPGGTEAPPRKIPRNAAPMSEQEKVWYQRIVDQTLDSSLMGRYGTIDEQVRAILFL 235
Query: 240 CLSATSYVTGQVICVDGG 257
SY+TG V+ V GG
Sbjct: 236 ASDEASYITGTVLPVGGG 253
|
DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256 |
| >gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Score = 118 bits (299), Expect = 2e-32
Identities = 65/232 (28%), Positives = 110/232 (47%), Gaps = 13/232 (5%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE---TELNQRIQEWKSKGLQVSG 66
+LKG AL+TG + GIG A LA GA V +R E L I + L +
Sbjct: 3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALAL-- 60
Query: 67 SVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESA 126
D+ RA E +E + +F G+++IL+NNAG + E +D+ ++ TN +
Sbjct: 61 ---DVTDRAAVEAAIEALPEEF-GRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGL 116
Query: 127 YHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKI 186
+ ++ P + +G+II + S+AG P ++Y ++K A+ + L E A I
Sbjct: 117 LNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSLGLRQELAGTGI 176
Query: 187 RVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAF 238
RV ++P ++ T TV + E A+++ L P +++ V F
Sbjct: 177 RVTVISPGLVETTEFSTV-RFEGDDERADKVYKGGTALT---PEDIAEAVLF 224
|
Length = 246 |
| >gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 118 bits (298), Expect = 2e-32
Identities = 58/191 (30%), Positives = 96/191 (50%), Gaps = 1/191 (0%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
SL+G AL+TG +GIG AV LA G V +R E L +E ++ G++V +
Sbjct: 4 SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATA 63
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
D+ + +E + ++ G ++ILINNAG + E ++ ++ N Y+
Sbjct: 64 DVSDYEEVTAAIEQLKNEL-GSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYA 122
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
++ P + +G+II ISS AG + S Y++SK + LT++L E K IRV
Sbjct: 123 TRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQEVRKHNIRVT 182
Query: 190 TVAPWVIRTPL 200
+ P + T +
Sbjct: 183 ALTPSTVATDM 193
|
Length = 239 |
| >gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 117 bits (296), Expect = 3e-32
Identities = 71/247 (28%), Positives = 111/247 (44%), Gaps = 18/247 (7%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR 74
T LVTG TKGIG A+ LA G V +R+ + ++ + CDL
Sbjct: 5 TVLVTGATKGIGLALSLRLANLGHQVIGIARSAID------DFPGELFA-----CDLADI 53
Query: 75 AQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAH 134
Q + ++ ++ ++NN G +P+ + V N +A ++Q
Sbjct: 54 EQTAATLAQINEIHP--VDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFL 111
Query: 135 PLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPW 194
+K G I+ I S A + + Y+++K A+ T+ A E A+ I VN VAP
Sbjct: 112 EGMKLREQGRIVNICSRA-IFGALDRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPG 170
Query: 195 VIRTPLLDTVEKDSNFLEHANRMVLRT-PMLRPGEPNEVSSVVAFLCLSATSYVTGQVIC 253
I T L + + VL + PM R G P EV++ +AFL ++TGQV+
Sbjct: 171 PIETELF---RQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAFLLSDDAGFITGQVLG 227
Query: 254 VDGGYSV 260
VDGG S+
Sbjct: 228 VDGGGSL 234
|
Length = 234 |
| >gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Score = 116 bits (291), Expect = 2e-31
Identities = 77/249 (30%), Positives = 123/249 (49%), Gaps = 8/249 (3%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRI-QEWKSKGLQVSGSV 68
L G A+VTGG KGIG A+ LA GA V + E + + E +G V
Sbjct: 3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQ 62
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYH 128
D+ +L+E + F GK++IL+NNAG + + ED+ V+ N S ++
Sbjct: 63 ADVSKVEDANRLVEEAVNHF-GKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFN 121
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
+ P + A G II ISS+ G + Y+++K M TK+LA E AK + V
Sbjct: 122 TTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELAKTNVTV 181
Query: 189 NTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248
N + P I T ++ V ++ ++V + P R G+ +E++ V +LC +Y+T
Sbjct: 182 NAICPGFIDTEMVAEVPEEVR-----QKIVAKIPKKRFGQADEIAKGVVYLCRDG-AYIT 235
Query: 249 GQVICVDGG 257
GQ + ++GG
Sbjct: 236 GQQLNINGG 244
|
Length = 247 |
| >gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Score = 115 bits (289), Expect = 4e-31
Identities = 84/256 (32%), Positives = 129/256 (50%), Gaps = 27/256 (10%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIV--HTCSRNE------TELNQRIQEWKSKGL 62
L G ALVTG + GIG + L A GAIV H +R E EL +R++ + +
Sbjct: 4 LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHG-TRVEKLEALAAELGERVKIFPA--- 59
Query: 63 QVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTN 122
+L R + + L + + +G ++IL+NNAG ++ED+ +V+ N
Sbjct: 60 -------NLSDRDEVKALGQKAEADLEG-VDILVNNAGITKDGLFVRMSDEDWDSVLEVN 111
Query: 123 FESAYHLS-QLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEW 181
+ + L+ +L HP+++ G II I+SV GV P + Y +SK M +K+LA E
Sbjct: 112 LTATFRLTRELTHPMMRRR-YGRIINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEI 170
Query: 182 AKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCL 241
A + VN VAP I + + + + ++ PM R G EV+S VA+L
Sbjct: 171 ATRNVTVNCVAPGFIESAMTGKLND-----KQKEAIMGAIPMKRMGTGAEVASAVAYLAS 225
Query: 242 SATSYVTGQVICVDGG 257
S +YVTGQ I V+GG
Sbjct: 226 SEAAYVTGQTIHVNGG 241
|
Length = 245 |
| >gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 115 bits (289), Expect = 6e-31
Identities = 73/251 (29%), Positives = 107/251 (42%), Gaps = 13/251 (5%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRI-QEWKSKGLQVSGSVC 69
A+VTG GIG A E LA GA V N E +R+ ++ + G
Sbjct: 4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADIN-AEGAERVAKQIVADGGTAIAVQV 62
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNA---GTFIPKETTEFTEEDFSTVMTTNFESA 126
D+ + + + S F G ++ L+NNA G + + M+ N + A
Sbjct: 63 DVSDPDSAKAMADATVSAF-GGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGA 121
Query: 127 YHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKI 186
++ + + G G I+ SS A A + Y +KV +N LT+ LA E I
Sbjct: 122 LVCTRAVYKHMAKRGGGAIVNQSSTA---AWLYSNFYGLAKVGLNGLTQQLARELGGMNI 178
Query: 187 RVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246
RVN +AP I T TV E MV P+ R G P ++ + FL S+
Sbjct: 179 RVNAIAPGPIDTEATRTVTPK----EFVADMVKGIPLSRMGTPEDLVGMCLFLLSDEASW 234
Query: 247 VTGQVICVDGG 257
+TGQ+ VDGG
Sbjct: 235 ITGQIFNVDGG 245
|
Length = 250 |
| >gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 115 bits (288), Expect = 7e-31
Identities = 79/254 (31%), Positives = 127/254 (50%), Gaps = 10/254 (3%)
Query: 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSV 68
+ L G AL+TG + GIG V GA V +R+ L + E + G +V
Sbjct: 5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVC 64
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYH 128
CD+ Q +++ V+++ G ++I + NAG + E+F + TN +
Sbjct: 65 CDVSQHQQVTSMLDQVTAELGG-IDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFL 123
Query: 129 LSQLA-HPLLKSAGNGNIIFISSVAG-VIAIPM-CSIYASSKVAMNQLTKNLACEWAKDK 185
+Q A ++K G II +S++G +I +P S Y +SK A+ LTK +A E A K
Sbjct: 124 TAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVELAPHK 183
Query: 186 IRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245
IRVN+V+P I T L++ E+ + P+ R G P E++ + +L A+S
Sbjct: 184 IRVNSVSPGYILTELVEPYT------EYQPLWEPKIPLGRLGRPEELAGLYLYLASEASS 237
Query: 246 YVTGQVICVDGGYS 259
Y+TG I +DGGY+
Sbjct: 238 YMTGSDIVIDGGYT 251
|
Length = 253 |
| >gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Score = 114 bits (287), Expect = 7e-31
Identities = 78/245 (31%), Positives = 124/245 (50%), Gaps = 11/245 (4%)
Query: 16 ALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR 74
ALVTGG GIG A+ + LA G + C NE +QE + G D+
Sbjct: 3 ALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSF 62
Query: 75 AQREKLMETVSSQFDGKLNILINNAGTFIPKETT--EFTEEDFSTVMTTNFESAYHLSQL 132
+ + V ++ G +++L+NNAG I ++ T + T E +S V+ TN S ++++Q
Sbjct: 63 ESCKAAVAKVEAEL-GPIDVLVNNAG--ITRDATFKKMTYEQWSAVIDTNLNSVFNVTQP 119
Query: 133 AHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVA 192
++ G G II ISSV G + Y+++K M TK LA E A + VNT++
Sbjct: 120 VIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTIS 179
Query: 193 PWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVI 252
P I T ++ + +D N +V + P+ R G P E+++ VAFL Y+TG +
Sbjct: 180 PGYIATDMVMAMREDV-----LNSIVAQIPVGRLGRPEEIAAAVAFLASEEAGYITGATL 234
Query: 253 CVDGG 257
++GG
Sbjct: 235 SINGG 239
|
This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242 |
| >gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 114 bits (288), Expect = 8e-31
Identities = 58/193 (30%), Positives = 94/193 (48%), Gaps = 10/193 (5%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC- 69
L+G ++TG + GIG + LA GA + +R E L +E KS+ L++
Sbjct: 1 LQGKVVIITGASSGIGEELAYHLARLGARLVLSARREERL----EEVKSECLELGAPSPH 56
Query: 70 ----DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFES 125
D+ E+++E F G L+ILINNAG + + + + +M N+
Sbjct: 57 VVPLDMSDLEDAEQVVEEALKLF-GGLDILINNAGISMRSLFHDTSIDVDRKIMEVNYFG 115
Query: 126 AYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDK 185
L++ A P L G+I+ +SS+AG I +P + YA+SK A+ +L E ++
Sbjct: 116 PVALTKAALPHLIERSQGSIVVVSSIAGKIGVPFRTAYAASKHALQGFFDSLRAELSEPN 175
Query: 186 IRVNTVAPWVIRT 198
I V V P +I T
Sbjct: 176 ISVTVVCPGLIDT 188
|
Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 114 bits (288), Expect = 9e-31
Identities = 71/256 (27%), Positives = 116/256 (45%), Gaps = 15/256 (5%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
L+G AL+TG GIG AV E A GA V E + VS V
Sbjct: 4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTR 63
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
+ ++++ +F G ++IL NNA F + + + + + N + + L
Sbjct: 64 ---QDSIDRIVAAAVERF-GGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLM 119
Query: 131 Q-LAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
Q +A +++ G II ++S AG + S Y ++K A+ T++ A + I VN
Sbjct: 120 QAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVISYTQSAALALIRHGINVN 179
Query: 190 TVAPWVIRTPLLDTVEKDSNFLEHAN-------RMV-LRTPMLRPGEPNEVSSVVAFLCL 241
+AP V+ TP+ D V D+ F + N R+V P+ R G P++++ + FL
Sbjct: 180 AIAPGVVDTPMWDQV--DALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLAS 237
Query: 242 SATSYVTGQVICVDGG 257
+ Y+ Q VDGG
Sbjct: 238 ADADYIVAQTYNVDGG 253
|
Length = 257 |
| >gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 114 bits (287), Expect = 1e-30
Identities = 66/255 (25%), Positives = 106/255 (41%), Gaps = 17/255 (6%)
Query: 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSV 68
G T VTG +GIGYAV GA V + + V
Sbjct: 4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQE---------DYPFATFV 54
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYH 128
D+ A ++ + + ++ G L++L+N AG T ++ED+ N A++
Sbjct: 55 LDVSDAAAVAQVCQRLLAET-GPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFN 113
Query: 129 LSQLAHPLLKSAGNGNIIFISS-VAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
L + P + +G I+ + S A V I M + Y +SK A+ L K + E A +R
Sbjct: 114 LFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGM-AAYGASKAALTSLAKCVGLELAPYGVR 172
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRT-----PMLRPGEPNEVSSVVAFLCLS 242
N V+P T + T+ D + + P+ + P E+++ V FL
Sbjct: 173 CNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLFLASD 232
Query: 243 ATSYVTGQVICVDGG 257
S++T Q I VDGG
Sbjct: 233 LASHITLQDIVVDGG 247
|
Length = 252 |
| >gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 114 bits (286), Expect = 1e-30
Identities = 75/252 (29%), Positives = 127/252 (50%), Gaps = 12/252 (4%)
Query: 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE----TELNQRIQEWKSKGLQVSGSVCDL 71
A +TG G+G A+ +A GA V N+ I +G+ + +V D+
Sbjct: 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFA-AVQDV 60
Query: 72 KIRAQREKLMETVSSQFDGKLNILINNAG--TFIPKETTEFTEEDFSTVMTTNFESAYHL 129
AQ + L+ + G L++L+NNAG +F E E +++ VM N ES +
Sbjct: 61 TDEAQWQALLAQAADAMGG-LSVLVNNAGVGSFGAIEQIEL--DEWRRVMAINVESIFLG 117
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDK--IR 187
+ A P L+++ +I+ ISSVA A P + Y +SK A+ LTK++A + A+ +R
Sbjct: 118 CKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCARRGLDVR 177
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
N++ P IRT ++D + + E ++ P+ R GEP++V+ V +L + +V
Sbjct: 178 CNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASDESRFV 237
Query: 248 TGQVICVDGGYS 259
TG + +DGG
Sbjct: 238 TGAELVIDGGIC 249
|
Length = 251 |
| >gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 113 bits (285), Expect = 2e-30
Identities = 65/248 (26%), Positives = 104/248 (41%), Gaps = 15/248 (6%)
Query: 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRA 75
+VTG +GIG AV L GA V L + + L V+ + +R
Sbjct: 1 VIVTGAAQGIGRAVARHLLQAGATVIALDLPFVLLLEYGDPLRLTPLDVADAA---AVRE 57
Query: 76 QREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHP 135
+L+ G ++ L+N AG P T + ED+ N ++L Q P
Sbjct: 58 VCSRLLAE-----HGPIDALVNCAGVLRPGATDPLSTEDWEQTFAVNVTGVFNLLQAVAP 112
Query: 136 LLKSAGNGNIIFISS-VAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPW 194
+K G I+ ++S A V I M + Y +SK A+ L+K L E A +R N V+P
Sbjct: 113 HMKDRRTGAIVTVASNAAHVPRISMAA-YGASKAALASLSKCLGLELAPYGVRCNVVSPG 171
Query: 195 VIRTPLLDTVEKDSNFLEHANRMVLRT-----PMLRPGEPNEVSSVVAFLCLSATSYVTG 249
T + T+ D + V P+ + +P ++++ V FL ++T
Sbjct: 172 STDTAMQRTLWHDEDGAAQVIAGVPEQFRLGIPLGKIAQPADIANAVLFLASDQAGHITM 231
Query: 250 QVICVDGG 257
+ VDGG
Sbjct: 232 HDLVVDGG 239
|
2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244 |
| >gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 113 bits (285), Expect = 2e-30
Identities = 72/253 (28%), Positives = 106/253 (41%), Gaps = 4/253 (1%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGSV 68
L G ALVTG +GIG A+ A GA V + + G +V
Sbjct: 5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVP 64
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYH 128
D+ A + F G L++L+NNAG + + T+ED+ + + A++
Sbjct: 65 ADVTDAASVAAAVAAAEEAF-GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWN 123
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
+ P + G G+I+ I+S IP C Y +K + LT+ L E+A +RV
Sbjct: 124 GCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAKHGLLGLTRALGIEYAARNVRV 183
Query: 189 NTVAPWVIRTPLLDTVEKDSNFLEHANRMVLR-TPMLRPGEPNEVSSVVAFLCLSATSYV 247
N +AP I T L + A L PM R G P EV+ FL ++
Sbjct: 184 NAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAVFLASDEAPFI 243
Query: 248 TGQVICVDGGYSV 260
I +DGG SV
Sbjct: 244 NATCITIDGGRSV 256
|
Length = 260 |
| >gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 5e-30
Identities = 81/255 (31%), Positives = 115/255 (45%), Gaps = 17/255 (6%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
L G A++TGG GIG A LAA GA V + E GL V V D
Sbjct: 5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADE--VGGLFVPTDVTD 62
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPK----ETTEFTEEDFSTVMTTNFESA 126
L +T + + G ++I NNAG P+ T + + V N S
Sbjct: 63 ---EDAVNALFDTAAETY-GSVDIAFNNAGISPPEDDSILNTGL--DAWQRVQDVNLTSV 116
Query: 127 YHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSI-YASSKVAMNQLTKNLACEWAKDK 185
Y + A P + G G+II +S V+ I Y +SK + +++ L ++A+
Sbjct: 117 YLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQFARQG 176
Query: 186 IRVNTVAPWVIRTPLL-DTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244
IRVN + P + TPLL + KD E A R ++ PM R EP E+++ VAFL
Sbjct: 177 IRVNALCPGPVNTPLLQELFAKDP---ERAARRLVHVPMGRFAEPEEIAAAVAFLASDDA 233
Query: 245 SYVTGQVICVDGGYS 259
S++T VDGG S
Sbjct: 234 SFITASTFLVDGGIS 248
|
Length = 255 |
| >gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 6e-30
Identities = 73/259 (28%), Positives = 115/259 (44%), Gaps = 16/259 (6%)
Query: 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE----TELNQRIQEWKSKGL 62
Q + L G A VTG GIG + LA GA V E + I+ + +
Sbjct: 2 QLFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAI 61
Query: 63 QVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTN 122
Q++ V +A + ++ G L + +N AG E EE + TVM N
Sbjct: 62 QIAADVTS---KADLRAAVARTEAEL-GALTLAVNAAGIANANPAEEMEEEQWQTVMDIN 117
Query: 123 FESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIP--MCSIYASSKVAMNQLTKNLACE 180
+ Q + G G+I+ I+S++G+I + + Y +SK + L+K+LA E
Sbjct: 118 LTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKAGVIHLSKSLAME 177
Query: 181 WAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLR-TPMLRPGEPNEVSSVVAFL 239
W IRVN+++P TP+ E + H ++ TPM R + +E+ FL
Sbjct: 178 WVGRGIRVNSISPGYTATPMNTRPE-----MVHQTKLFEEQTPMQRMAKVDEMVGPAVFL 232
Query: 240 CLSATSYVTGQVICVDGGY 258
A S+ TG + VDGG+
Sbjct: 233 LSDAASFCTGVDLLVDGGF 251
|
Length = 254 |
| >gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 112 bits (281), Expect = 7e-30
Identities = 70/257 (27%), Positives = 115/257 (44%), Gaps = 9/257 (3%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
+L G TA+VTG GIG + ELA GA V N+ N E G + G
Sbjct: 4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAM 63
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
D+ ++ V+ +F G ++IL++NAG I ++ D+ + + + A+
Sbjct: 64 DVTNEDAVNAGIDKVAERF-GSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLT 122
Query: 130 SQLAHPLLKSAGN-GNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
++ A + G +I++ SV A P+ S Y ++K + L + LA E AK +R
Sbjct: 123 TKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRS 182
Query: 189 NTVAPWVIRTPLLDT----VEKDSNFLEHANR---MVLRTPMLRPGEPNEVSSVVAFLCL 241
+ V P +RTPL+D K+ E M+ +T +V+ V FL
Sbjct: 183 HVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLSS 242
Query: 242 SATSYVTGQVICVDGGY 258
++ +TGQ V G+
Sbjct: 243 FPSAALTGQSFVVSHGW 259
|
Length = 262 |
| >gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 112 bits (283), Expect = 7e-30
Identities = 58/206 (28%), Positives = 85/206 (41%), Gaps = 21/206 (10%)
Query: 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEW---KSKGLQVSGSVC 69
G ++TG GIG ELA GA V RNE E + ++ +V
Sbjct: 1 GKVVVITGANSGIGKETARELAKRGAHVIIACRNE-EKGEEAAAEIKKETGNAKVEVIQL 59
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
DL A + E ++F +L+ILINNAG P T++ F N+ + L
Sbjct: 60 DLSSLASVRQFAEEFLARFP-RLDILINNAGIMAPPRRL--TKDGFELQFAVNYLGHFLL 116
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIA-----IPMCS---------IYASSKVAMNQLTK 175
+ L P+LK++ I+ +SS+A Y SK+A T+
Sbjct: 117 TNLLLPVLKASAPSRIVNVSSIAHRAGPIDFNDLDLENNKEYSPYKAYGQSKLANILFTR 176
Query: 176 NLACEWAKDKIRVNTVAPWVIRTPLL 201
LA + VN + P V+RT LL
Sbjct: 177 ELARRLEGTGVTVNALHPGVVRTELL 202
|
Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269 |
| >gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4 | Back alignment and domain information |
|---|
Score = 111 bits (278), Expect = 1e-29
Identities = 66/227 (29%), Positives = 98/227 (43%), Gaps = 17/227 (7%)
Query: 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRA 75
ALVTG ++GIG A L A G V C+R+E L + V G D++ A
Sbjct: 3 ALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQELEG---VLGLAGDVRDEA 59
Query: 76 QREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHP 135
+ ++ + F G L+ L+NNAG + K E T E++ V+ TN A++ A P
Sbjct: 60 DVRRAVDAMEEAFGG-LDALVNNAGVGVMKPVEELTPEEWRLVLDTNLTGAFYCIHKAAP 118
Query: 136 LLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWV 195
L G G I+ + S+AG A + Y +SK + L++ + + IRV V P
Sbjct: 119 ALLRRGGGTIVNVGSLAGKNAFKGGAAYNASKFGLLGLSEAAMLDLREANIRVVNVMPGS 178
Query: 196 IRTPLLDTVEKDSNFLE-----HANRMVLRTPM--------LRPGEP 229
+ T + E + L A L P LRP P
Sbjct: 179 VDTGFAGSPEGQAWKLAPEDVAQAVLFALEMPARALVSRIELRPTRP 225
|
This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226 |
| >gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 1e-29
Identities = 84/256 (32%), Positives = 129/256 (50%), Gaps = 17/256 (6%)
Query: 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGS 67
+SL+G A+VTG G+G + LA G IV TE +++ + L ++
Sbjct: 6 FSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTA- 64
Query: 68 VCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAY 127
DL+ L+E ++F G ++IL+NNAG ++ EF+E+D+ VM N +S +
Sbjct: 65 --DLRKIDGIPALLERAVAEF-GHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVF 121
Query: 128 HLSQLAHPLLKSAGNG----NIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAK 183
+SQ A + GNG NI + S G I +P Y +SK + +T+ +A EWAK
Sbjct: 122 FMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPS---YTASKSGVMGVTRLMANEWAK 178
Query: 184 DKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVL-RTPMLRPGEPNEVSSVVAFLCLS 242
I VN +AP + T + D E + +L R P R G P+++ V FL S
Sbjct: 179 HNINVNAIAPGYMATNNTQQLRAD----EQRSAEILDRIPAGRWGLPSDLMGPVVFLASS 234
Query: 243 ATSYVTGQVICVDGGY 258
A+ Y+ G I VDGG+
Sbjct: 235 ASDYINGYTIAVDGGW 250
|
Length = 253 |
| >gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 2e-29
Identities = 87/257 (33%), Positives = 120/257 (46%), Gaps = 23/257 (8%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIV-----HTCSRNETELNQRIQEWKSKGLQVS 65
L+G AL+TG GIG A A GA + ++ E+ Q IQ K + +
Sbjct: 53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALP 112
Query: 66 GSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFE 124
G DLK A +L+E + G L+IL+N AG K+ + T E F TN
Sbjct: 113 G---DLKDEAFCRQLVERAVKELGG-LDILVNIAGKQTAVKDIADITTEQFDATFKTNVY 168
Query: 125 SAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKD 184
+ + L + A P L + II S+ P YAS+K A+ TK LA + A+
Sbjct: 169 AMFWLCKAAIPHLPPGAS--IINTGSIQSYQPSPTLLDYASTKAAIVAFTKALAKQVAEK 226
Query: 185 KIRVNTVAPWVIRTPLLDT----VEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC 240
IRVN VAP + TPL + EK +F TPM RPG+P E++ + L
Sbjct: 227 GIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSE-------TPMKRPGQPVEMAPLYVLLA 279
Query: 241 LSATSYVTGQVICVDGG 257
+SYVTG+V V GG
Sbjct: 280 SQESSYVTGEVFGVTGG 296
|
Length = 300 |
| >gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 3e-29
Identities = 72/272 (26%), Positives = 104/272 (38%), Gaps = 55/272 (20%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR 74
T ++TG GIG A E L G V E ++ DL
Sbjct: 1 TIVITGAASGIGAATAELLEDAGHTVIGIDLREADVI-----------------ADLSTP 43
Query: 75 AQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAH 134
R + V ++ G L+ L+N AG V+ N+ L +
Sbjct: 44 EGRAAAIADVLARCSGVLDGLVNCAGVGGTTVA--------GLVLKVNYFGLRALMEALL 95
Query: 135 PLLKSAGNGNIIFISSVAGV---------------------IAI------PMCSIYASSK 167
P L+ + +SS+AG +A+ P YA SK
Sbjct: 96 PRLRKGHGPAAVVVSSIAGAGWAQDKLELAKALAAGTEARAVALAEHAGQPGYLAYAGSK 155
Query: 168 VAMNQLTKNLACEWAKDK-IRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRP 226
A+ T+ A W +RVNTVAP + TP+L +D E + V TPM R
Sbjct: 156 EALTVWTRRRAATWLYGAGVRVNTVAPGPVETPILQAFLQDPRGGESVDAFV--TPMGRR 213
Query: 227 GEPNEVSSVVAFLCLSATSYVTGQVICVDGGY 258
EP+E++ V+AFL A S++ G + VDGG
Sbjct: 214 AEPDEIAPVIAFLASDAASWINGANLFVDGGL 245
|
Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2 | Back alignment and domain information |
|---|
Score = 109 bits (275), Expect = 3e-29
Identities = 52/195 (26%), Positives = 82/195 (42%), Gaps = 7/195 (3%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
L G T L+TGGT GIG A+ + G V R E L + +E + + V
Sbjct: 2 KLTGNTVLITGGTSGIGLALARKFLEAGNTVIITGRREERLAEAKKELPN----IHTIVL 57
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETT--EFTEEDFSTVMTTNFESAY 127
D+ E L E + S++ L+ILINNAG P + + T + TN
Sbjct: 58 DVGDAESVEALAEALLSEYP-NLDILINNAGIQRPIDLRDPASDLDKADTEIDTNLIGPI 116
Query: 128 HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
L + P LK I+ +SS + + +Y ++K A++ T L + +
Sbjct: 117 RLIKAFLPHLKKQPEATIVNVSSGLAFVPMAANPVYCATKAALHSYTLALRHQLKDTGVE 176
Query: 188 VNTVAPWVIRTPLLD 202
V + P + T L +
Sbjct: 177 VVEIVPPAVDTELHE 191
|
Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228 |
| >gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 109 bits (275), Expect = 5e-29
Identities = 58/203 (28%), Positives = 87/203 (42%), Gaps = 19/203 (9%)
Query: 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE-----TELNQRIQEWKSKGLQVSGSVCD 70
A++TGG GIG A + L GA V RNE EL + K+ +Q CD
Sbjct: 3 AIITGGASGIGLATAKLLLKKGAKVAILDRNENPGAAAELQAINPKVKATFVQ-----CD 57
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFT--EEDFSTVMTTNFESAYH 128
+ Q + +F G+++ILINNAG K + + N +
Sbjct: 58 VTSWEQLAAAFKKAIEKF-GRVDILINNAGILDEKSYLFAGKLPPPWEKTIDVNLTGVIN 116
Query: 129 LSQLAHPLLKSA---GNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDK 185
+ LA + G I+ I SVAG+ P +Y++SK + T++LA + K
Sbjct: 117 TTYLALHYMDKNKGGKGGVIVNIGSVAGLYPAPQFPVYSASKHGVVGFTRSLADL-LEYK 175
Query: 186 --IRVNTVAPWVIRTPLLDTVEK 206
+RVN + P TPLL +
Sbjct: 176 TGVRVNAICPGFTNTPLLPDLVA 198
|
This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244 |
| >gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 108 bits (273), Expect = 5e-29
Identities = 54/226 (23%), Positives = 102/226 (45%), Gaps = 16/226 (7%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR 74
ALVTG ++GIG + LA G V RN +L + G V D +
Sbjct: 2 VALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLAAL----SASGGDVEAVPYDARDP 57
Query: 75 AQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAH 134
L++ + +F G++++L++NAG P E ++ + + N + L++
Sbjct: 58 EDARALVDALRDRF-GRIDVLVHNAGIGRPTTLREGSDAELEAHFSINVIAPAELTRALL 116
Query: 135 PLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPW 194
P L+ AG+G ++F++S++G + + Y++SK A+ L L E +RV+ V P
Sbjct: 117 PALREAGSGRVVFLNSLSGKRVLAGNAGYSASKFALRALAHALRQEGWDHGVRVSAVCPG 176
Query: 195 VIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC 240
+ TP+ + F P +P +++++V +
Sbjct: 177 FVDTPMAQGLTLVGAF-----------PPEEMIQPKDIANLVRMVI 211
|
This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223 |
| >gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 5e-29
Identities = 80/266 (30%), Positives = 128/266 (48%), Gaps = 37/266 (13%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
LK ++TGG +G+G A+ E LA GA + N+ +L + + E + G +V G +
Sbjct: 3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAAN 62
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGT-----FIPKETTEFTE----EDFSTVMTT 121
+ E ++ F G+LN LINNAG + + + T E F +V+
Sbjct: 63 VTDEEDVEATFAQIAEDF-GQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDV 121
Query: 122 NF--------ESAYHLSQLAHPLLKSAGNGNIIFISSV--AGVIAIPMCSIYASSKVAMN 171
N E+A +++S G II ISS+ AG + + Y++SK +
Sbjct: 122 NLTGVFLCGREAAAK-------MIESGSKGVIINISSIARAGNMGQ---TNYSASKAGVA 171
Query: 172 QLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNE 231
+T A E A+ IRV +AP VI T + ++ ++ LE R+ P+ R GEP E
Sbjct: 172 AMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPEA--LE---RLEKMIPVGRLGEPEE 226
Query: 232 VSSVVAFLCLSATSYVTGQVICVDGG 257
++ V F+ YVTG+V+ +DGG
Sbjct: 227 IAHTVRFII--ENDYVTGRVLEIDGG 250
|
Length = 253 |
| >gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 6e-29
Identities = 82/260 (31%), Positives = 127/260 (48%), Gaps = 21/260 (8%)
Query: 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVS 65
Q + L G A++TG G+G + LA GA IV E ++ ++ G +
Sbjct: 2 QLFDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQV---EALGRKFH 58
Query: 66 GSVCDLKIRAQREKLMETVSSQFD--GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNF 123
DL Q++ + VS + G ++ILINNAG ++ EF +D+ V+ N
Sbjct: 59 FITADL---IQQKDIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQ 115
Query: 124 ESAYHLSQ-LAHPLLKSAGNGNIIFISSV---AGVIAIPMCSIYASSKVAMNQLTKNLAC 179
++ + LSQ +A +K G II I+S+ G I +P Y +SK A+ LT+ LA
Sbjct: 116 KTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPS---YTASKSAVMGLTRALAT 172
Query: 180 EWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVL-RTPMLRPGEPNEVSSVVAF 238
E ++ I VN +AP + T + D N +L R P R G P++++ F
Sbjct: 173 ELSQYNINVNAIAPGYMATDNTAALRAD----TARNEAILERIPASRWGTPDDLAGPAIF 228
Query: 239 LCLSATSYVTGQVICVDGGY 258
L SA+ YVTG + VDGG+
Sbjct: 229 LSSSASDYVTGYTLAVDGGW 248
|
Length = 251 |
| >gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 108 bits (273), Expect = 1e-28
Identities = 80/265 (30%), Positives = 113/265 (42%), Gaps = 18/265 (6%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
L G AL+TGG GIG A+VE A GA V R+ +L Q + L V G V
Sbjct: 4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTS 63
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTF-----IPKETTEFTEEDFSTVMTTNFES 125
+ + +TV F GKL+ + NAG + + E + F + N +
Sbjct: 64 YA--DNQRAVDQTV-DAF-GKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKG 119
Query: 126 AYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDK 185
++ A P LK A G++IF S + +Y +SK A+ L + LA E A
Sbjct: 120 YLLGAKAALPALK-ASGGSMIFTLSNSSFYPGGGGPLYTASKHAVVGLVRQLAYELAPK- 177
Query: 186 IRVNTVAPWVIRTPL-----LDTVEKD-SNFLEHANRMVLRTPMLRPGEPNEVSSVVAFL 239
IRVN VAP T L L E S+ A+ + TP+ +P + + L
Sbjct: 178 IRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTGPYVLL 237
Query: 240 CLSATS-YVTGQVICVDGGYSVTGF 263
S +TG VI DGG + G
Sbjct: 238 ASRRNSRALTGVVINADGGLGIRGI 262
|
Length = 263 |
| >gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 108 bits (271), Expect = 2e-28
Identities = 72/254 (28%), Positives = 127/254 (50%), Gaps = 8/254 (3%)
Query: 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKGLQVSG 66
+SL G L+TG +GIG+ + LA +GA I++ + E + + + +G++
Sbjct: 5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAE--LAVAKLRQEGIKAHA 62
Query: 67 SVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESA 126
+ ++ + + E +E + G +++LINNAG TEF E++++ V+ N +
Sbjct: 63 APFNVTHKQEVEAAIEHIEKDI-GPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAV 121
Query: 127 YHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKI 186
+ +SQ + G II I S+ + + YA+SK A+ LT+ + E A+ I
Sbjct: 122 FLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELARHNI 181
Query: 187 RVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246
+VN +AP +T + + +D F + RTP R G+P E+ FL A+ +
Sbjct: 182 QVNGIAPGYFKTEMTKALVEDEAF---TAWLCKRTPAARWGDPQELIGAAVFLSSKASDF 238
Query: 247 VTGQVICVDGGYSV 260
V G ++ VDGG V
Sbjct: 239 VNGHLLFVDGGMLV 252
|
Length = 254 |
| >gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 5e-28
Identities = 65/191 (34%), Positives = 96/191 (50%), Gaps = 11/191 (5%)
Query: 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLK 72
G ++TG ++GIG A+ LA GA + +RNET L QE G + D+
Sbjct: 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVS 60
Query: 73 IRAQREKLMETVSSQFDGKLNILINNAG-----TFIPKETTEFTEEDFSTVMTTNFESAY 127
E+L+E ++F G ++IL+NNAG F E T+ F VM N+ A
Sbjct: 61 DAEACERLIEAAVARF-GGIDILVNNAGITMWSRF--DELTDL--SVFERVMRVNYLGAV 115
Query: 128 HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
+ + A P LK A G I+ +SS+AG+ +P S YA+SK A++ +L E A D +
Sbjct: 116 YCTHAALPHLK-ASRGQIVVVSSLAGLTGVPTRSGYAASKHALHGFFDSLRIELADDGVA 174
Query: 188 VNTVAPWVIRT 198
V V P + T
Sbjct: 175 VTVVCPGFVAT 185
|
Length = 263 |
| >gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 107 bits (268), Expect = 7e-28
Identities = 74/249 (29%), Positives = 118/249 (47%), Gaps = 6/249 (2%)
Query: 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSV-CD 70
+VTGG++GIG +V GA V C+R E E G V CD
Sbjct: 8 ADKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGSCKFVPCD 67
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTE-EDFSTVMTTNFESAYHL 129
+ + L+ +F G+++ L+NNAG P +TT+ T ++F ++ N S +
Sbjct: 68 VTKEEDIKTLISVTVERF-GRIDCLVNNAGWHPPHQTTDETSAQEFRDLLNLNLISYFLA 126
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
S+ A P L+ + GNII +SS+ G I + Y ++K A+ +TK LA + ++ +RVN
Sbjct: 127 SKYALPHLRKS-QGNIINLSSLVGSIGQKQAAPYVATKGAITAMTKALAVDESRYGVRVN 185
Query: 190 TVAPWVIRTPLLDTVEKDS-NFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248
++P I TPL + + + + L L + R G E FL AT + T
Sbjct: 186 CISPGNIWTPLWEELAAQTPDTLATIKEGELAQLLGRMGTEAESGLAALFLAAEAT-FCT 244
Query: 249 GQVICVDGG 257
G + + GG
Sbjct: 245 GIDLLLSGG 253
|
These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261 |
| >gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 1e-27
Identities = 64/202 (31%), Positives = 94/202 (46%), Gaps = 14/202 (6%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN------------QRIQEWK 58
L G A VTG ++GIG A+ LA GA V ++ +E + + +E +
Sbjct: 1 LSGKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIE 60
Query: 59 SKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTV 118
+ G Q V D++ Q L+E QF G+L+IL+NNAG + + F +
Sbjct: 61 AAGGQALPIVVDVRDEDQVRALVEATVDQF-GRLDILVNNAGAIWLSLVEDTPAKRFDLM 119
Query: 119 MTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLA 178
N Y LSQ A P + AG G+I+ IS + YA+ K M++LT LA
Sbjct: 120 QRVNLRGTYLLSQAALPHMVKAGQGHILNISPPLSLRPARGDVAYAAGKAGMSRLTLGLA 179
Query: 179 CEWAKDKIRVNTVAP-WVIRTP 199
E + I VN++ P I TP
Sbjct: 180 AELRRHGIAVNSLWPSTAIETP 201
|
This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246 |
| >gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 104 bits (263), Expect = 3e-27
Identities = 54/186 (29%), Positives = 92/186 (49%), Gaps = 5/186 (2%)
Query: 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGSVCDLKIR 74
A+VTG T GIG A EELA G V SR + +L+ +E + K G++ D
Sbjct: 4 AVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYGVETKTIAADFSAG 63
Query: 75 AQREKLMETVSSQFDGKLNILINNAGTF--IPKETTEFTEEDFSTVMTTNFESAYHLSQL 132
+ +E D + IL+NN G IP+ E E++ ++ N + +++L
Sbjct: 64 DDIYERIEKELEGLD--IGILVNNVGISHSIPEYFLETPEDELQDIINVNVMATLKMTRL 121
Query: 133 AHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVA 192
P + G I+ ISS AG+I P+ + Y++SK ++ ++ L E+ I V ++
Sbjct: 122 ILPGMVKRKKGAIVNISSFAGLIPTPLLATYSASKAFLDFFSRALYEEYKSQGIDVQSLL 181
Query: 193 PWVIRT 198
P+++ T
Sbjct: 182 PYLVAT 187
|
This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239 |
| >gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 104 bits (262), Expect = 4e-27
Identities = 72/260 (27%), Positives = 116/260 (44%), Gaps = 27/260 (10%)
Query: 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDL 71
KG+ A+VTGG G+G A VE L A GA V + + + V V
Sbjct: 1 KGLVAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPGET-VAKLGDNCRFVPVDVTS- 58
Query: 72 KIRAQREKLMETVSSQFDGKLNILINNAGTFIPKET------TEFTEEDFSTVMTTNFES 125
+ + ++F G+L+I++N AG + +T + E F V+ N
Sbjct: 59 --EKDVKAALALAKAKF-GRLDIVVNCAGIAVAAKTYNKKGQQPHSLELFQRVINVNLIG 115
Query: 126 AYHLSQLAHPLL-KSAGN-----GNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLAC 179
+++ +LA + K+ + G II +SVA + Y++SK + +T +A
Sbjct: 116 TFNVIRLAAGAMGKNEPDQGGERGVIINTASVAAFEGQIGQAAYSASKGGIVGMTLPIAR 175
Query: 180 EWAKDKIRVNTVAPWVIRTPLLDTV-EKDSNFLEHANRMVLRTPML-RPGEPNEVSSVVA 237
+ A IRV T+AP + TPLL + EK +FL P R G+P E + +V
Sbjct: 176 DLAPQGIRVVTIAPGLFDTPLLAGLPEKVRDFLAKQ------VPFPSRLGDPAEYAHLVQ 229
Query: 238 FLCLSATSYVTGQVICVDGG 257
+ Y+ G+VI +DG
Sbjct: 230 HIIE--NPYLNGEVIRLDGA 247
|
HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252 |
| >gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 104 bits (262), Expect = 6e-27
Identities = 76/262 (29%), Positives = 118/262 (45%), Gaps = 21/262 (8%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
L G ALVTGGT+G+G A+ A GA + C RN + + E ++ G +
Sbjct: 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQA 63
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
DL +++ F G+L+ L+N AG + + E F N + + L
Sbjct: 64 DLSDVEDCRRVVAAADEAF-GRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFL 122
Query: 130 SQLAHPLL---KSAGN-GNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDK 185
Q A L+ K+ G NI +S+ G P + Y +SK A+ LT+N A +++
Sbjct: 123 MQEAIKLMRRRKAEGTIVNIGSMSAHGGQ---PFLAAYCASKGALATLTRNAAYALLRNR 179
Query: 186 IRVNTVAPWVIRTPLLDTVEK-----DSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC 240
IRVN + + T D +++ ++LE A P R +P+EV+ VAFL
Sbjct: 180 IRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAA---TQPFGRLLDPDEVARAVAFLL 236
Query: 241 LSATSYVTGQVICVD----GGY 258
+ +TG VI D G Y
Sbjct: 237 SDESGLMTGSVIDFDQSVWGAY 258
|
Length = 260 |
| >gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 103 bits (260), Expect = 1e-26
Identities = 77/249 (30%), Positives = 124/249 (49%), Gaps = 11/249 (4%)
Query: 11 LKGMTALVTG--GTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GL-QVSG 66
L G LVT GT GIG A GA V +E L + E ++ GL +V
Sbjct: 15 LAGKVVLVTAAAGT-GIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEA 73
Query: 67 SVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESA 126
VCD+ AQ + L++ + G+L++L+NNAG + T++++S V+
Sbjct: 74 VVCDVTSEAQVDALIDAAVERL-GRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGT 132
Query: 127 YHLSQLAHPLLKSAGNGNIIF-ISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDK 185
+ ++ A +++ G+G +I +SV G A + YA++K + LT+ A E A+
Sbjct: 133 FRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTRCSALEAAEYG 192
Query: 186 IRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245
+R+N VAP + P L V E + + R R EP EV++V+AFL +S
Sbjct: 193 VRINAVAPSIAMHPFLAKVTSA----ELLDELAAREAFGRAAEPWEVANVIAFLASDYSS 248
Query: 246 YVTGQVICV 254
Y+TG+V+ V
Sbjct: 249 YLTGEVVSV 257
|
Length = 262 |
| >gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 104 bits (259), Expect = 1e-26
Identities = 81/254 (31%), Positives = 127/254 (50%), Gaps = 13/254 (5%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIV--HTCSRNETELNQRIQEWKSKGLQVSGSV 68
LKG ALVTG ++GIG A+ + LA GA+V H +R E E + + E +S G
Sbjct: 2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKE-EAEETVYEIQSNGGSAFSIG 60
Query: 69 CDLKIRAQREKLMETVSSQF-----DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNF 123
+L+ E L ++ ++ K +ILINNAG E TE+ F +++ N
Sbjct: 61 ANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNA 120
Query: 124 ESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAK 183
++ + + Q A L+ N II ISS A I++P Y+ +K A+N +T LA +
Sbjct: 121 KAPFFIIQQALSRLRD--NSRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGA 178
Query: 184 DKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243
I VN + P I+T + + D ++A + + R GE +++ AFL
Sbjct: 179 RGITVNAILPGFIKTDMNAELLSDPMMKQYATTI---SAFNRLGEVEDIADTAAFLASPD 235
Query: 244 TSYVTGQVICVDGG 257
+ +VTGQ+I V GG
Sbjct: 236 SRWVTGQLIDVSGG 249
|
Length = 252 |
| >gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 102 bits (257), Expect = 2e-26
Identities = 69/251 (27%), Positives = 112/251 (44%), Gaps = 20/251 (7%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
T L+TG GIG A A GA V+ + + + L +S +
Sbjct: 3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDLS--GNFHFLQLDLSDDL-- 58
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHL 129
E L + V D IL N AG K + + E++ + TN S + L
Sbjct: 59 -------EPLFDWVP-SVD----ILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLL 106
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
++ P + +G II + S+A +A + Y +SK A+ TK LA ++AKD I+V
Sbjct: 107 TRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYAKDGIQVF 166
Query: 190 TVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTG 249
+AP ++TP+ D A+ + TP+ R EP EV+ + FL Y+ G
Sbjct: 167 GIAPGAVKTPM---TAADFEPGGLADWVARETPIKRWAEPEEVAELTLFLASGKADYMQG 223
Query: 250 QVICVDGGYSV 260
++ +DGG+++
Sbjct: 224 TIVPIDGGWTL 234
|
Length = 235 |
| >gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 102 bits (257), Expect = 2e-26
Identities = 81/265 (30%), Positives = 126/265 (47%), Gaps = 29/265 (10%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE---TELNQRIQEWKSKGLQVSGS 67
L+G ALVTG + G+G + LA GA V SR EL I+ VS
Sbjct: 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLD 66
Query: 68 VCDLK-IRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESA 126
V D + I+A ET + G ++IL+NN+G ++ + T DF V TN A
Sbjct: 67 VTDYQSIKAAVAH-AETEA----GTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGA 121
Query: 127 YHLSQ-LAHPLL---KSAGN----GNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLA 178
+ ++Q +A ++ K AGN G II I+SVAG+ +P +Y SK A+ +T+ +A
Sbjct: 122 FFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGLYCMSKAAVVHMTRAMA 181
Query: 179 CEWAKDKIRVNTVAPWVIRTPL----LDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSS 234
EW + I VN + P I T + +T E ++V P R G+P ++
Sbjct: 182 LEWGRHGINVNAICPGYIDTEINHHHWET--------EQGQKLVSMLPRKRVGKPEDLDG 233
Query: 235 VVAFLCLSATSYVTGQVICVDGGYS 259
++ L + ++ G +I D G+
Sbjct: 234 LLLLLAADESQFINGAIISADDGFG 258
|
Length = 258 |
| >gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 102 bits (257), Expect = 3e-26
Identities = 72/266 (27%), Positives = 122/266 (45%), Gaps = 26/266 (9%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE--WKSKGLQVSGSV 68
L+G A+VTGG+ GIG A VE L GA V C R+E L K G ++ +
Sbjct: 6 LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAAR 65
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAG-----TFIPKETTEFTEEDFSTVMTTNF 123
CD+ A V ++F G +++L+NNAG TF + T++ + + +
Sbjct: 66 CDVLDEADVAAFAAAVEARF-GGVDMLVNNAGQGRVSTF-----ADTTDDAWRDELELKY 119
Query: 124 ESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAK 183
S + ++ PLL+++ +I+ ++S+ + P ++++ + L K+LA E A
Sbjct: 120 FSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSAARAGLLNLVKSLATELAP 179
Query: 184 DKIRVNTV-------APWVIRTPLLDTVEKDSNFLEHANRMVLRT---PMLRPGEPNEVS 233
+RVN++ W R + E + R P+ R G P+E +
Sbjct: 180 KGVRVNSILLGLVESGQWRRR---YEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAA 236
Query: 234 SVVAFLCLSATSYVTGQVICVDGGYS 259
+ FL +SY TG I V GG++
Sbjct: 237 RALFFLASPLSSYTTGSHIDVSGGFA 262
|
Length = 265 |
| >gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR | Back alignment and domain information |
|---|
Score = 101 bits (252), Expect = 9e-26
Identities = 57/192 (29%), Positives = 92/192 (47%), Gaps = 1/192 (0%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
L+G ALVTG + GIG A LAA GA V +R L E +++G + D
Sbjct: 1 LQGKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGKALVLELD 60
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
+ Q + +E G+L+IL+NNAG + + D++ ++ TN + +
Sbjct: 61 VTDEQQVDAAVERTVEAL-GRLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYTT 119
Query: 131 QLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNT 190
A P G I+ ISSVAG +A+ ++Y ++K +N ++ L E + +RV
Sbjct: 120 HAALPHHLLRNKGTIVNISSVAGRVAVRNSAVYNATKFGVNAFSEGLRQEVTERGVRVVV 179
Query: 191 VAPWVIRTPLLD 202
+ P + T L D
Sbjct: 180 IEPGTVDTELRD 191
|
CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243 |
| >gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 101 bits (252), Expect = 1e-25
Identities = 86/259 (33%), Positives = 127/259 (49%), Gaps = 19/259 (7%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHT-CSRNETELNQRIQEWKSKGLQVSGSV 68
+L G ALVTG ++GIG A+ LA GA+V RN+ ++ I+E +S G +
Sbjct: 3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIE 62
Query: 69 CDLKIRAQREKLMETVSSQFD-----GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNF 123
DL +KL+E + ++ +++IL+NNAG TEE F +M N
Sbjct: 63 ADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNI 122
Query: 124 ESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAK 183
++ + L Q PLL++ G +I ISS + Y SK A+N +T LA +
Sbjct: 123 KAPFFLIQQTLPLLRA--EGRVINISSAEVRLGFTGSIAYGLSKGALNTMTLPLAKHLGE 180
Query: 184 DKIRVNTVAPWVIRT----PLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFL 239
I VNT+ P +T LLD E NF N V R G+ +++ VAFL
Sbjct: 181 RGITVNTIMPGYTKTDINAKLLDDPEI-RNFA--TNSSVFG----RIGQVEDIADAVAFL 233
Query: 240 CLSATSYVTGQVICVDGGY 258
S + +VTGQ+I V GG+
Sbjct: 234 ASSDSRWVTGQIIDVSGGF 252
|
Length = 254 |
| >gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 101 bits (252), Expect = 1e-25
Identities = 84/261 (32%), Positives = 127/261 (48%), Gaps = 11/261 (4%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG-LQVSGSVC 69
L G A T +KGIG+ V LA GA V SRNE L + ++ KS+ + VS V
Sbjct: 6 LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVA 65
Query: 70 DLKIRAQREKLMETVSSQFD-GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYH 128
DL +RE L TV + G+ +I + G P E + ED+ + A +
Sbjct: 66 DL---TKREDLERTVKELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVY 122
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
L++ P ++ G G II+ +SVA IP ++ +++M L + LA E I V
Sbjct: 123 LTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRISMAGLVRTLAKELGPKGITV 182
Query: 189 NTVAPWVIRTPLL-----DTVEKDSNFLEHANRMVLR-TPMLRPGEPNEVSSVVAFLCLS 242
N + P +IRT + D +++ +E A + + P+ R GEP E+ +VAFL
Sbjct: 183 NGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLVAFLASD 242
Query: 243 ATSYVTGQVICVDGGYSVTGF 263
SY+ G +I VDGG + F
Sbjct: 243 LGSYINGAMIPVDGGRLNSVF 263
|
Length = 263 |
| >gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 2e-25
Identities = 57/215 (26%), Positives = 93/215 (43%), Gaps = 13/215 (6%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR 74
L+TGG GIG + E A GA V NE + + G +V CD+ R
Sbjct: 1 IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGKVHYYKCDVSKR 60
Query: 75 AQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAH 134
+ + + + + G + ILINNAG K+ E +E+ N + + ++
Sbjct: 61 EEVYEAAKKIKKEV-GDVTILINNAGVVSGKKLLELPDEEIEKTFEVNTLAHFWTTKAFL 119
Query: 135 PLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACE---WAKDKIRVNTV 191
P + +G+I+ I+SVAG+I+ + Y +SK A ++L E + K I+ V
Sbjct: 120 PDMLERNHGHIVTIASVAGLISPAGLADYCASKAAAVGFHESLRLELKAYGKPGIKTTLV 179
Query: 192 APWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRP 226
P+ I T + V+ L P+L P
Sbjct: 180 CPYFINTGMFQGVK---------TPRPLLAPILEP 205
|
17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243 |
| >gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 2e-25
Identities = 79/253 (31%), Positives = 111/253 (43%), Gaps = 19/253 (7%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIV----HTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
ALVTGG++GIG A LA G V E+ I + K + + D
Sbjct: 3 IALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISD 62
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTE-FTEEDFSTVMTTNFESAYHL 129
Q + + D L L+NNAG + T E T E + V++TN + Y L
Sbjct: 63 ---ENQVVAMFTAIDQH-DEPLAALVNNAGILFTQCTVENLTAERINRVLSTNV-TGYFL 117
Query: 130 ---SQLAHPLLKSAGNGN-IIFISSVAGVIAIPMCSI-YASSKVAMNQLTKNLACEWAKD 184
+ LK G+G I+ +SS A + P + YA+SK A++ LT L+ E A
Sbjct: 118 CCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTTGLSLEVAAQ 177
Query: 185 KIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244
IRVN V P I T + +R+ PM R G+P EV+ + +L
Sbjct: 178 GIRVNCVRPGFIYTEM----HASGGEPGRVDRVKSNIPMQRGGQPEEVAQAIVWLLSDKA 233
Query: 245 SYVTGQVICVDGG 257
SYVTG I + GG
Sbjct: 234 SYVTGSFIDLAGG 246
|
Length = 247 |
| >gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 2e-25
Identities = 74/264 (28%), Positives = 115/264 (43%), Gaps = 23/264 (8%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGSVC 69
L G L+TG +KGIG A E AA G +H +R+ L + ++ G+ V+
Sbjct: 5 LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHAL 64
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTE-FTEEDFSTVMTTNFESAYH 128
DL RE+L G ++IL+NNAG IP + + +
Sbjct: 65 DLSSPEAREQLAAEA-----GDIDILVNNAGA-IPGGGLDDVDDAAWRAGWELKVFGYID 118
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
L++LA+P +K+ G+G I+ + AG ++ A+ T+ L + D +RV
Sbjct: 119 LTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGNAALMAFTRALGGKSLDDGVRV 178
Query: 189 NTVAPWVIRTPLLDTVEKDSNFLEHANRM----------VLRTPMLRPGEPNEVSSVVAF 238
V P + T + T+ K A + P+ RP P EV+ +VAF
Sbjct: 179 VGVNPGPVATDRMLTLLK-----GRARAELGDESRWQELLAGLPLGRPATPEEVADLVAF 233
Query: 239 LCLSATSYVTGQVICVDGGYSVTG 262
L + Y +G V+ VDGG S G
Sbjct: 234 LASPRSGYTSGTVVTVDGGISARG 257
|
Length = 259 |
| >gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR | Back alignment and domain information |
|---|
Score = 99.8 bits (249), Expect = 3e-25
Identities = 63/250 (25%), Positives = 105/250 (42%), Gaps = 15/250 (6%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR-IQEWKSKGLQVSGSVCDLKI 73
LVTG ++G+G A+ A GA V TE + E + + + V D
Sbjct: 2 VVLVTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAAEAGERAIAIQADVRD--- 58
Query: 74 RAQREKLMETVSSQFDGKLNILINNA---GTFIPKETTEFTE---EDFSTVMTTNFESAY 127
R Q + ++E + F G ++ ++NNA F P + F ED+ + + A
Sbjct: 59 RDQVQAMIEEAKNHF-GPVDTIVNNALIDFPFDPDQRKTFDTIDWEDYQQQLEGAVKGAL 117
Query: 128 HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
+L Q P K G+G +I I + + Y ++K A+ T+N+A E I
Sbjct: 118 NLLQAVLPDFKERGSGRVINIGTNLFQNPVVPYHDYTTAKAALLGFTRNMAKELGPYGIT 177
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
VN V+ +++ F + + TP+ + P +++ V F V
Sbjct: 178 VNMVSGGLLKVTDASAATPKEVF----DAIAQTTPLGKVTTPQDIADAVLFFASPWARAV 233
Query: 248 TGQVICVDGG 257
TGQ + VDGG
Sbjct: 234 TGQNLVVDGG 243
|
This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246 |
| >gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Score = 99.6 bits (248), Expect = 4e-25
Identities = 71/254 (27%), Positives = 112/254 (44%), Gaps = 8/254 (3%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
LK TA+VTGG GIG A A GA V N + + ++KG CD
Sbjct: 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACD 60
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
+ R + + G +++L+NNAG T+ + ++ N A H+
Sbjct: 61 ITDRDSVDTAVAAAEQAL-GPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMH 119
Query: 131 QLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNT 190
P + G G I+ I+S A + ++YA+ K + +K +A E A+ I VN
Sbjct: 120 HAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREHARHGITVNV 179
Query: 191 VAPWVIRTPLLDTV----EKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246
V P T LLD + E E R + P+ R G+P+++ + F S+
Sbjct: 180 VCPGPTDTALLDDICGGAENPEKLREAFTRAI---PLGRLGQPDDLPGAILFFSSDDASF 236
Query: 247 VTGQVICVDGGYSV 260
+TGQV+ V GG ++
Sbjct: 237 ITGQVLSVSGGLTM 250
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250 |
| >gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 5e-25
Identities = 64/229 (27%), Positives = 109/229 (47%), Gaps = 9/229 (3%)
Query: 5 REQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQV 64
R+ R L G L+TG + GIG A ++A GA V +RN L++ + E ++KG
Sbjct: 363 RDLRGPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTA 422
Query: 65 SGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTE--EDFSTVMTTN 122
CDL A + ++ + ++ ++ L+NNAG I + T+ D+ M N
Sbjct: 423 HAYTCDLTDSAAVDHTVKDILAEHGH-VDYLVNNAGRSIRRSVENSTDRFHDYERTMAVN 481
Query: 123 FESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA-IPMCSIYASSKVAMNQLTKNLACEW 181
+ A L P ++ G+++ +SS GV P S Y +SK A++ + A E
Sbjct: 482 YFGAVRLILGLLPHMRERRFGHVVNVSS-IGVQTNAPRFSAYVASKAALDAFSDVAASET 540
Query: 182 AKDKIRVNTVAPWVIRTPLLDTVEKDSNF----LEHANRMVLRTPMLRP 226
D I T+ ++RTP++ ++ +N E A MV+R + +P
Sbjct: 541 LSDGITFTTIHMPLVRTPMIAPTKRYNNVPTISPEEAADMVVRAIVEKP 589
|
Length = 657 |
| >gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 99.2 bits (248), Expect = 6e-25
Identities = 75/260 (28%), Positives = 125/260 (48%), Gaps = 23/260 (8%)
Query: 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE--TELNQRIQEWKSKGLQVSGSVC 69
G +VTG +GIG V AA GA V R+E E+ + ++ G +
Sbjct: 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAEL---RAAGGEALALTA 63
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINN-AGTFIPKETTEFTEEDF-STVMTTNFESAY 127
DL+ A + M F G++++LINN GT K E+ EE + + + F + +
Sbjct: 64 DLETYAGAQAAMAAAVEAF-GRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLW 122
Query: 128 HLSQLAHPLLKSAGNGNIIFISSVA--GVIAIPMCSIYASSKVAMNQLTKNLACEWAKDK 185
+ P + + G G I+ +SS+A G+ +P Y+++K +N LT +LA E+A+
Sbjct: 123 -CCRAVLPHMLAQGGGAIVNVSSIATRGINRVP----YSAAKGGVNALTASLAFEYAEHG 177
Query: 186 IRVNTVAPW--------VIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVA 237
IRVN VAP V R + ++ + + + ++ + + M R G +E + +
Sbjct: 178 IRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQVAAIL 237
Query: 238 FLCLSATSYVTGQVICVDGG 257
FL SY+TG V+ V GG
Sbjct: 238 FLASDEASYITGTVLPVGGG 257
|
Length = 260 |
| >gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3 | Back alignment and domain information |
|---|
Score = 98.6 bits (246), Expect = 7e-25
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 13/211 (6%)
Query: 18 VTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQR 77
+TG + GIG A A GA V +R+ L++ +E + G + V D+ AQ
Sbjct: 5 ITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRELGGEAIAVVADVADAAQV 64
Query: 78 EKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLL 137
E+ +T +F G+++ +NNAG + + T E+F V N+ + + A P L
Sbjct: 65 ERAADTAVERF-GRIDTWVNNAGVAVFGRFEDVTPEEFRRVFDVNYLGHVYGTLAALPHL 123
Query: 138 KSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDK--IRVNTVAPWV 195
+ G G +I + S+ G + P+ + Y++SK A+ T++L E A D I V V P
Sbjct: 124 RRRGGGALINVGSLLGYRSAPLQAAYSASKHAVRGFTESLRAELAHDGAPISVTLVQPTA 183
Query: 196 IRTPLLDTVEKDSNFLEHANRMVLRTPMLRP 226
+ TP F HA + + P P
Sbjct: 184 MNTP----------FFGHARSYMGKKPKPPP 204
|
These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233 |
| >gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 99.0 bits (247), Expect = 7e-25
Identities = 71/257 (27%), Positives = 124/257 (48%), Gaps = 25/257 (9%)
Query: 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLK 72
++TGG+ G+G A+ + A GA V R + +L + E + QV D++
Sbjct: 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVR 60
Query: 73 IRAQREKLMETVSSQFDGKLNILINN-AGTFI-PKETTEFTEEDFSTVMTTNFESAYHLS 130
+K++E + +F G+++ LINN AG FI P E + + +++V+ ++ S
Sbjct: 61 NPEDVQKMVEQIDEKF-GRIDALINNAAGNFICPAE--DLSVNGWNSVIDIVLNGTFYCS 117
Query: 131 Q-LAHPLLKSAGNGNIIFISSV------AGVIAIPMCSIYASSKVAMNQLTKNLACEWAK 183
Q + ++ GNII + + GVI A++K + +T+ LA EW +
Sbjct: 118 QAVGKYWIEKGIKGNIINMVATYAWDAGPGVIH------SAAAKAGVLAMTRTLAVEWGR 171
Query: 184 D-KIRVNTVAPWVIRTPLLDTVEKDSNFL-EHANRMVLRT-PMLRPGEPNEVSSVVAFLC 240
IRVN +AP P+ T D + E A + +++ P+ R G P E++ + FL
Sbjct: 172 KYGIRVNAIAP----GPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFLL 227
Query: 241 LSATSYVTGQVICVDGG 257
+Y+ G I +DGG
Sbjct: 228 SDEAAYINGTCITMDGG 244
|
Length = 252 |
| >gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 98.6 bits (246), Expect = 9e-25
Identities = 80/266 (30%), Positives = 114/266 (42%), Gaps = 28/266 (10%)
Query: 10 SLKGMTALVTGGTK--GIGYAVVEELAAFGAIV--HTCSRNETELNQRI---------QE 56
L ALVTG ++ GIG AV LAA G + S + + + +E
Sbjct: 2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEE 61
Query: 57 WKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFS 116
+S G++ DL ++ VS + G +ILINNA E T E
Sbjct: 62 IESYGVRCEHMEIDLSQPYAPNRVFYAVSERL-GDPSILINNAAYSTHTRLEELTAEQLD 120
Query: 117 TVMTTNFESAYHLSQL-AHPLLKSAGNGNIIFISSVAGVIAIPMCS--IYASSKVAMNQL 173
N + LS A AG G II ++S G PM YA++K A+
Sbjct: 121 KHYAVNVRATMLLSSAFAKQYDGKAG-GRIINLTS--GQSLGPMPDELAYAATKGAIEAF 177
Query: 174 TKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVS 233
TK+LA E A+ I VN V P T + E + +V + P R GEP + +
Sbjct: 178 TKSLAPELAEKGITVNAVNPGPTDTGWITE--------ELKHHLVPKFPQGRVGEPVDAA 229
Query: 234 SVVAFLCLSATSYVTGQVICVDGGYS 259
++AFL ++TGQVI +GG+S
Sbjct: 230 RLIAFLVSEEAKWITGQVIHSEGGFS 255
|
Length = 256 |
| >gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 98.0 bits (244), Expect = 1e-24
Identities = 68/250 (27%), Positives = 108/250 (43%), Gaps = 14/250 (5%)
Query: 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQ-VSGSVCDL 71
G A+VTGG GIG + + G V + + E E + L V G V D
Sbjct: 1 GKVAIVTGGGHGIGKQICLDFLEAGDKV-VFADIDEERGADFAEAEGPNLFFVHGDVADE 59
Query: 72 KIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQ 131
+ K + + G++++L+NNA + E++ +++ N Y LS+
Sbjct: 60 TLV----KFVVYAMLEKLGRIDVLVNNAARGSKGILSSLLLEEWDRILSVNLTGPYELSR 115
Query: 132 LAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTV 191
L G II I+S + P YA+SK + LT LA D IRVN +
Sbjct: 116 YCRDELI-KNKGRIINIASTRAFQSEPDSEAYAASKGGLVALTHALAMSLGPD-IRVNCI 173
Query: 192 AP-WVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQ 250
+P W+ T + +HA + P R G P +++++V FLC ++TG+
Sbjct: 174 SPGWINTTEQQEFTAAPLTQEDHA-----QHPAGRVGTPKDIANLVLFLCQQDAGFITGE 228
Query: 251 VICVDGGYSV 260
VDGG +
Sbjct: 229 TFIVDGGMTK 238
|
This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242 |
| >gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase | Back alignment and domain information |
|---|
Score = 98.0 bits (245), Expect = 1e-24
Identities = 60/247 (24%), Positives = 103/247 (41%), Gaps = 17/247 (6%)
Query: 20 GGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSK-GLQVSGSVCDLKIRAQR 77
I +A+ + A GA +V T + + E + V D+
Sbjct: 3 ADDNSIAWAIAKAAAEEGAEVVLTTWPPALRMG-AVDELAKELPADVI--PLDVTSDEDI 59
Query: 78 EKLMETVSSQFDGKLNILINNAGTFIP-----KETTEFTEEDFSTVMTTNFESAYHLSQL 132
++L E V GK++ L+++ P K + + E F + + S L++
Sbjct: 60 DELFEKVKEDG-GKIDFLVHSIA-MSPEIRKGKPYLDTSREGFLKALDISAYSFISLAKA 117
Query: 133 AHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVA 192
A PL+ G+I+ +S +A P +K A+ L + LA E + IRVNT++
Sbjct: 118 AKPLMNE--GGSIVALSYIAAERVFPGYGGMGVAKAALESLARYLAYELGRKGIRVNTIS 175
Query: 193 PWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVI 252
+T + +E+A M P+ R EV++ AFL +TGQ++
Sbjct: 176 AGPTKTTAGSGIGGFDKMVEYAEEM---APLGRNASAEEVANAAAFLLSDLARGITGQIL 232
Query: 253 CVDGGYS 259
VDGG+S
Sbjct: 233 YVDGGFS 239
|
Length = 239 |
| >gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 98.1 bits (245), Expect = 1e-24
Identities = 69/245 (28%), Positives = 113/245 (46%), Gaps = 15/245 (6%)
Query: 15 TALVTGGTKGIGYAVVEELAA--FGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLK 72
++TG ++GIG A+ EEL ++V +R+E L Q ++E GL+V+ DL
Sbjct: 1 VIILTGASRGIGRALAEELLKRGSPSVVVLLARSEEPL-QELKEELRPGLRVTTVKADLS 59
Query: 73 IRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEED-FSTVMTTNFESAYHLSQ 131
A E+L+E + + DG+ ++LINNAG+ P EF + D N S L+
Sbjct: 60 DAAGVEQLLEAIR-KLDGERDLLINNAGSLGPVSKIEFIDLDELQKYFDLNLTSPVCLTS 118
Query: 132 LAHPLLKSAG-NGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNT 190
K G ++ +SS A V +Y SSK A + + LA E + +RV +
Sbjct: 119 TLLRAFKKRGLKKTVVNVSSGAAVNPFKGWGLYCSSKAARDMFFRVLAAE--EPDVRVLS 176
Query: 191 VAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGE---PNEVSSVVAFLCLSATSYV 247
AP V+ T + + + S E +R + GE P + + +A L L +
Sbjct: 177 YAPGVVDTDMQREIRETSADPETRSRF---RSLKEKGELLDPEQSAEKLANL-LEKDKFE 232
Query: 248 TGQVI 252
+G +
Sbjct: 233 SGAHV 237
|
Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241 |
| >gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 98.6 bits (246), Expect = 1e-24
Identities = 80/263 (30%), Positives = 112/263 (42%), Gaps = 21/263 (7%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
LKG AL+TGG G+G A+VE A GA V R+ ++ + ++ + V G V
Sbjct: 2 LKGEVALITGGGSGLGRALVERFVAEGAKVAVLDRSAEKVAELRADFGDAVVGVEGDVRS 61
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAG-----TFIPKETTEFTEEDFSTVMTTNFES 125
L A E+ + +F GKL+ I NAG T + E +E F + N +
Sbjct: 62 L---ADNERAVARCVERF-GKLDCFIGNAGIWDYSTSLVDIPEEKLDEAFDELFHINVKG 117
Query: 126 AYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDK 185
++ A P L A G++IF S AG +Y +SK A+ L K LA E A
Sbjct: 118 YILGAKAALPALY-ATEGSVIFTVSNAGFYPGGGGPLYTASKHAVVGLVKQLAYELAP-H 175
Query: 186 IRVNTVAPWVIRTPL-------LDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAF 238
IRVN VAP + T L + L + + P+ EP + + F
Sbjct: 176 IRVNGVAPGGMVTDLRGPASLGQGETSISTPPL--DDMLKSILPLGFAPEPEDYTGAYVF 233
Query: 239 LCLSA-TSYVTGQVICVDGGYSV 260
L TG VI DGG V
Sbjct: 234 LASRGDNRPATGTVINYDGGMGV 256
|
cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR | Back alignment and domain information |
|---|
Score = 98.1 bits (244), Expect = 1e-24
Identities = 66/256 (25%), Positives = 107/256 (41%), Gaps = 15/256 (5%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
L G TAL+TG +GIG A + GA V N E +S V D
Sbjct: 1 LDGKTALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEIGPAACAISLDVTD 60
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
+A ++ + + ++ G ++IL+NNA F + T E + + N +
Sbjct: 61 ---QASIDRCVAALVDRW-GSIDILVNNAALFDLAPIVDITRESYDRLFAINVSGTLFMM 116
Query: 131 QLAHPLLKSAGNG-NIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
Q + + G G II ++S AG + +Y ++K A+ LT++ + I VN
Sbjct: 117 QAVARAMIAQGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVN 176
Query: 190 TVAPWVIRTPLLDTVEKDSNFLEHANR--------MVLRTPMLRPGEPNEVSSVVAFLCL 241
+AP V+ D V D+ F + NR + P R G +++ + FL
Sbjct: 177 AIAPGVVDGEHWDGV--DAKFARYENRPRGEKKRLVGEAVPFGRMGRAEDLTGMAIFLAS 234
Query: 242 SATSYVTGQVICVDGG 257
+ Y+ Q VDGG
Sbjct: 235 TDADYIVAQTYNVDGG 250
|
This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254 |
| >gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 97.5 bits (243), Expect = 2e-24
Identities = 72/255 (28%), Positives = 128/255 (50%), Gaps = 12/255 (4%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSK-GLQVSGSV 68
+KG T +++GGT+GIG A+V E A G I T + N E N+ ++ + K G++
Sbjct: 6 MKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYP 65
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNA---GTFIPKETTEFTE---EDFSTVMTTN 122
++ ++L + + FD +++ I+NA G + T+F + + + T
Sbjct: 66 LNILEPETYKELFKKIDEDFD-RVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTAT 124
Query: 123 FESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWA 182
+ +Q A ++ G G+II +SS ++ I + + +SK A+ + K A E
Sbjct: 125 VNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYAGHGTSKAAVETMVKYAATELG 184
Query: 183 KDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS 242
+ IRVN V+ I T D ++ +N+ E + +P+ R G+P +++ FLC
Sbjct: 185 EKNIRVNAVSGGPIDT---DALKAFTNYEEVKAKTEELSPLNRMGQPEDLAGACLFLCSE 241
Query: 243 ATSYVTGQVICVDGG 257
S++TGQ I VDGG
Sbjct: 242 KASWLTGQTIVVDGG 256
|
Length = 260 |
| >gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 97.0 bits (242), Expect = 3e-24
Identities = 58/188 (30%), Positives = 84/188 (44%), Gaps = 12/188 (6%)
Query: 16 ALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR 74
L+TG ++GIG +V +L A G V R+ + + + + ++ D+
Sbjct: 1 VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATE-LAALGASHSRLHILELDVTDE 59
Query: 75 AQREKLMETVSSQF-DGKLNILINNAGTFIPKET-TEFTEEDFSTVMTTNFESAYHLSQL 132
+ E V+ + D L++LINNAG +E ED V N L+Q
Sbjct: 60 IA--ESAEAVAERLGDAGLDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLGPLLLTQA 117
Query: 133 AHPLLKSAGNGNIIFISSVAGVIAI----PMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
PLL II ISS G I S Y +SK A+N LTK+LA E +D I V
Sbjct: 118 FLPLLLKGARAKIINISSRVGSIGDNTSGGWYS-YRASKAALNMLTKSLAVELKRDGITV 176
Query: 189 NTVAP-WV 195
++ P WV
Sbjct: 177 VSLHPGWV 184
|
Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233 |
| >gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 97.1 bits (242), Expect = 4e-24
Identities = 64/246 (26%), Positives = 101/246 (41%), Gaps = 12/246 (4%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR 74
TALVTG GIG A+ A G V + L CDL
Sbjct: 4 TALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDAR--FVPVACDLTDA 61
Query: 75 AQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAH 134
A + +++ G +++L+ NAG + T + N E+AY +
Sbjct: 62 ASLAAALANAAAER-GPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVL 120
Query: 135 PLLKSAGNGNIIFISSVAGVIAI--PMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVA 192
+ G ++ I SV G+ A+ P Y+++K + TK LA E+ + IR N VA
Sbjct: 121 EGMLKRSRGAVVNIGSVNGMAALGHPA---YSAAKAGLIHYTKLLAVEYGRFGIRANAVA 177
Query: 193 PWVIRTPLLDT-VEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQV 251
P ++T + V + E + P+ P++V++ V FL A +TG
Sbjct: 178 PGTVKTQAWEARVAANPQVFEELKKWY---PLQDFATPDDVANAVLFLASPAARAITGVC 234
Query: 252 ICVDGG 257
+ VDGG
Sbjct: 235 LPVDGG 240
|
Length = 257 |
| >gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 96.0 bits (239), Expect = 1e-23
Identities = 69/257 (26%), Positives = 111/257 (43%), Gaps = 21/257 (8%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET-ELNQRIQEWKSKGLQVSGSVC 69
L G ALVTG ++GIG + +L GA V+ R +L +E +++G + C
Sbjct: 1 LSGKIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARGGKCIPVRC 60
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNA----GTFIPKETTEFTEED---FSTVMTTN 122
D + E L E V+ + G+L+IL+NNA + F EE + +
Sbjct: 61 DHSDDDEVEALFERVAREQQGRLDILVNNAYAAVQLILVGVAKPFWEEPPTIWDDINNVG 120
Query: 123 FESAYHLSQLAHPLLKSAGNGNIIFISSVAGV---IAIPMCSIYASSKVAMNQLTKNLAC 179
+ Y S A PL+ AG G I+ ISS G+ + Y K A++++ ++A
Sbjct: 121 LRAHYACSVYAAPLMVKAGKGLIVIISSTGGLEYLFNVA----YGVGKAAIDRMAADMAH 176
Query: 180 EWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVS--SVVA 237
E + V ++ P +RT L+ + +D HA GE E S VVA
Sbjct: 177 ELKPHGVAVVSLWPGFVRTELVLEMPEDDEGSWHAK----ERDAFLNGETTEYSGRCVVA 232
Query: 238 FLCLSATSYVTGQVICV 254
++G+V+
Sbjct: 233 LAADPDLMELSGRVLIT 249
|
This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265 |
| >gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 99.5 bits (248), Expect = 1e-23
Identities = 71/269 (26%), Positives = 112/269 (41%), Gaps = 31/269 (11%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN-------ETELNQRIQEWKSKGL 62
+L A VTGG GIG LAA GA V N E+N + ++ L
Sbjct: 411 TLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVAL 470
Query: 63 QVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTN 122
++ D+ + V+ + G ++I++NNAG E T +++ +
Sbjct: 471 KM-----DVTDEQAVKAAFADVALAYGG-VDIVVNNAGIATSSPFEETTLQEWQLNLDIL 524
Query: 123 FESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEW 181
+ +++ A ++ G GNI+FI+S V A S Y+++K A L + LA E
Sbjct: 525 ATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARCLAAEG 584
Query: 182 AKDKIRVNTVAP-------------WVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGE 228
IRVNTV P W + D +A R +L+ +
Sbjct: 585 GTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIF---- 640
Query: 229 PNEVSSVVAFLCLSATSYVTGQVICVDGG 257
P +++ V FL S + TG +I VDGG
Sbjct: 641 PADIAEAVFFLASSKSEKTTGCIITVDGG 669
|
Length = 676 |
| >gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 95.6 bits (238), Expect = 1e-23
Identities = 74/256 (28%), Positives = 114/256 (44%), Gaps = 27/256 (10%)
Query: 16 ALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR 74
++TG ++GIG A A G A+ RN +Q + +G + D+
Sbjct: 5 MIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADE 64
Query: 75 AQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTE-EDFSTVMTTNFESAYHLSQLA 133
A +L E V + G+L+ L+NNAG + E + + + TN ++ ++ A
Sbjct: 65 ADVLRLFEAVDREL-GRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREA 123
Query: 134 HPLL--KSAGNGN-IIFISSVAGVIAIPMCSI-YASSKVAMNQLTKNLACEWAKDKIRVN 189
+ + G G I+ +SS+A + P I YA+SK A++ +T LA E A + IRVN
Sbjct: 124 VKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASKGAIDTMTIGLAKEVAAEGIRVN 183
Query: 190 TVAPWVIRTPLLDTVEKDSNFLEHA--------NRMVLRTPMLRPGEPNEVSSVVAFLCL 241
V P VI T + HA +R+ PM R G EV+ + +L
Sbjct: 184 AVRPGVIYTEI------------HASGGEPGRVDRVKAGIPMGRGGTAEEVARAILWLLS 231
Query: 242 SATSYVTGQVICVDGG 257
SY TG I V GG
Sbjct: 232 DEASYTTGTFIDVSGG 247
|
Length = 248 |
| >gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 95.0 bits (236), Expect = 2e-23
Identities = 67/250 (26%), Positives = 106/250 (42%), Gaps = 18/250 (7%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIV--HTCSRNETELNQRIQEWKSKGLQVSGSVCDLK 72
ALVT G A E L G V H S + Q + ++ G +
Sbjct: 3 IALVTHARHFAGPASAEALTEDGYTVVCHDASFADAAERQAFES-ENPGTKA-------- 53
Query: 73 IRAQR-EKLMETVSSQFDGKLNILINNAGTFIPKE---TTEFTEEDFSTVMTTNFESAYH 128
+ Q+ E+L++ V G +++L++N +IP+ +E D +
Sbjct: 54 LSEQKPEELVDAVLQAG-GAIDVLVSN--DYIPRPMNPIDGTSEADIRQAFEALSIFPFA 110
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
L Q A +K AG G+IIFI+S + S+Y ++ A L ++LA E ++D I V
Sbjct: 111 LLQAAIAQMKKAGGGSIIFITSAVPKKPLAYNSLYGPARAAAVALAESLAKELSRDNILV 170
Query: 189 NTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248
+ P +P N E R+ P+ R G P+E+ ++VAFL +T
Sbjct: 171 YAIGPNFFNSPTYFPTSDWENNPELRERVKRDVPLGRLGRPDEMGALVAFLASRRADPIT 230
Query: 249 GQVICVDGGY 258
GQ GGY
Sbjct: 231 GQFFAFAGGY 240
|
Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242 |
| >gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 95.0 bits (237), Expect = 3e-23
Identities = 58/192 (30%), Positives = 90/192 (46%), Gaps = 7/192 (3%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
LK L+TG + GIG A+ E LAA GA + RN +L G + V D
Sbjct: 3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPG-RHRWVVAD 61
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGT--FIPKETTEFTEEDFSTVMTTNFESAYH 128
L A RE ++ + + G +N+LINNAG F E + E ++ N +
Sbjct: 62 LTSEAGREAVLA-RAREMGG-INVLINNAGVNHFALLE--DQDPEAIERLLALNLTAPMQ 117
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
L++ PLL++ + ++ + S G I P + Y +SK A+ ++ L E A +RV
Sbjct: 118 LTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFALRGFSEALRRELADTGVRV 177
Query: 189 NTVAPWVIRTPL 200
+AP RT +
Sbjct: 178 LYLAPRATRTAM 189
|
Length = 263 |
| >gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 94.1 bits (234), Expect = 4e-23
Identities = 75/252 (29%), Positives = 116/252 (46%), Gaps = 17/252 (6%)
Query: 15 TALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKG---LQVSGSVCD 70
L+TG ++GIG A AA G ++ +R+ + ++ G V+G V +
Sbjct: 4 VVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVAN 63
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHL 129
A + + V S F G+L+ L+NNAG P + + TN AY
Sbjct: 64 ---EADVIAMFDAVQSAF-GRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLC 119
Query: 130 SQLAHPLL---KSAGNGNIIFISSVAGVIAIPMCSI-YASSKVAMNQLTKNLACEWAKDK 185
++ A L + G I+ +SS+A + P + YA SK A++ LT LA E
Sbjct: 120 AREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSKGAVDTLTLGLAKELGPHG 179
Query: 186 IRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245
+RVN V P +I T + A R+ +TP+ R GE +EV+ + +L A S
Sbjct: 180 VRVNAVRPGLIET----EIHASGGQPGRAARLGAQTPLGRAGEADEVAETIVWLLSDAAS 235
Query: 246 YVTGQVICVDGG 257
YVTG ++ V GG
Sbjct: 236 YVTGALLDVGGG 247
|
Length = 248 |
| >gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6 | Back alignment and domain information |
|---|
Score = 93.9 bits (234), Expect = 4e-23
Identities = 51/187 (27%), Positives = 92/187 (49%), Gaps = 1/187 (0%)
Query: 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRA 75
L+TG + GIG A+ E A G V +R L++ E + V + D+
Sbjct: 1 VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSVEVEILDVTDEE 60
Query: 76 QREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHP 135
+ + ++ + ++ G L+++I NAG + + + F + TN A + + A P
Sbjct: 61 RNQLVIAELEAEL-GGLDLVIINAGVGKGTSLGDLSFKAFRETIDTNLLGAAAILEAALP 119
Query: 136 LLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWV 195
++ G G+++ ISSVA + +P + Y++SK A++ L ++L + K IRV + P
Sbjct: 120 QFRAKGRGHLVLISSVAALRGLPGAAAYSASKAALSSLAESLRYDVKKRGIRVTVINPGF 179
Query: 196 IRTPLLD 202
I TPL
Sbjct: 180 IDTPLTA 186
|
These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239 |
| >gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 93.6 bits (233), Expect = 7e-23
Identities = 68/215 (31%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
G T L+TGG GIG A+ + G V C RNE L + E + VC
Sbjct: 2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPE----IHTEVC 57
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETT--EFTEEDFSTVMTTNFESAY 127
D+ R R +L+E + ++ LN+LINNAG ++ T E +D + TN +
Sbjct: 58 DVADRDSRRELVEWLKKEYP-NLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPI 116
Query: 128 HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCS--IYASSKVAMNQLTKNLACEWAKD- 184
L+ L P L II +SS G+ +PM S +Y ++K A++ T L E KD
Sbjct: 117 RLTALLLPHLLRQPEATIINVSS--GLAFVPMASTPVYCATKAAIHSYTLALR-EQLKDT 173
Query: 185 KIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVL 219
+ V +AP PL+DT E ++ +M L
Sbjct: 174 SVEVIELAP-----PLVDTTEGNTQ---ARGKMPL 200
|
Length = 245 |
| >gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 93.9 bits (234), Expect = 7e-23
Identities = 58/177 (32%), Positives = 91/177 (51%), Gaps = 4/177 (2%)
Query: 17 LVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQ 76
+TG ++G G A E G V +R+ L +++ + L ++ V D RA
Sbjct: 7 FITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTD---RAA 63
Query: 77 REKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPL 136
+ET F G+L+I++NNAG + E TE + + TNF A ++Q P
Sbjct: 64 VFAAVETAVEHF-GRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPY 122
Query: 137 LKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAP 193
L+ +G+II ISS+ G+ A PM IY +SK A+ +++ LA E A+ I+V V P
Sbjct: 123 LREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEP 179
|
Length = 275 |
| >gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Score = 93.2 bits (231), Expect = 9e-23
Identities = 68/243 (27%), Positives = 121/243 (49%), Gaps = 7/243 (2%)
Query: 16 ALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR 74
A VTGG GIG ++ + L G +V C N + +++ K+ G S ++
Sbjct: 6 AYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDW 65
Query: 75 AQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAH 134
+ + V ++ G++++L+NNAG + T ED++ V+ TN S +++++
Sbjct: 66 DSTKAAFDKVKAEV-GEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVI 124
Query: 135 PLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPW 194
+ G G II ISSV G + Y+++K ++ T +LA E A + VNTV+P
Sbjct: 125 DGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPG 184
Query: 195 VIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVICV 254
I T ++ + D ++V P+ R G P+E+ S+VA+L + + TG +
Sbjct: 185 YIGTDMVKAIRPDV-----LEKIVATIPVRRLGSPDEIGSIVAWLASEESGFSTGADFSL 239
Query: 255 DGG 257
+GG
Sbjct: 240 NGG 242
|
Length = 246 |
| >gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 92.7 bits (231), Expect = 2e-22
Identities = 80/264 (30%), Positives = 112/264 (42%), Gaps = 50/264 (18%)
Query: 14 MTALVTGGTKGIGYAVVEELAA--FGAIVHTCSRNETELNQRIQEWKSKG-----LQVSG 66
ALVTG + IG A+ +LAA F VH +R+ E E ++ G LQ
Sbjct: 10 RAALVTGAARRIGRAIALDLAAHGFDVAVH-YNRSRDEAEALAAEIRALGRRAVALQ--- 65
Query: 67 SVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESA 126
DL A+ L+ S+ G + +L+NNA F FT + M TN +
Sbjct: 66 --ADLADEAEVRALVARASAAL-GPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAP 122
Query: 127 YHLSQLAHPLLKSAGNG---NII----------FISSVAGVIAIPMCSIYASSKVAMNQL 173
+ L+Q L + G N+I F+S Y SK A+
Sbjct: 123 FVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLS-------------YTLSKAALWTA 169
Query: 174 TKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVS 233
T+ LA A +IRVN + P P L + + E R TP+ R P E++
Sbjct: 170 TRTLAQALAP-RIRVNAIGP----GPTLPSGRQSP---EDFARQHAATPLGRGSTPEEIA 221
Query: 234 SVVAFLCLSATSYVTGQVICVDGG 257
+ V +L L A S VTGQ+I VDGG
Sbjct: 222 AAVRYL-LDAPS-VTGQMIAVDGG 243
|
Length = 258 |
| >gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs | Back alignment and domain information |
|---|
Score = 92.4 bits (230), Expect = 2e-22
Identities = 66/258 (25%), Positives = 118/258 (45%), Gaps = 29/258 (11%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIV---------HTCSRNETELNQRIQEWKSK 60
G LVTG G+G A A GA V ++ + ++ + E K+
Sbjct: 2 RFDGRVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAA 61
Query: 61 GLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMT 120
G + +V + EK+++T F G+++IL+NNAG + + +EED+ VM
Sbjct: 62 GGK---AVANYDSVEDGEKIVKTAIDAF-GRVDILVNNAGILRDRSFAKMSEEDWDLVMR 117
Query: 121 TNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACE 180
+ + ++ +++ A P ++ G II SS AG+ + Y+++K+ + L+ LA E
Sbjct: 118 VHLKGSFKVTRAAWPYMRKQKFGRIINTSSAAGLYGNFGQANYSAAKLGLLGLSNTLAIE 177
Query: 181 WAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC 240
AK I NT+AP + + +T V+ + +P V+ +V +LC
Sbjct: 178 GAKYNITCNTIAP-AAGSRMTET--------------VMPEDLFDALKPEYVAPLVLYLC 222
Query: 241 LSATSYVTGQVICVDGGY 258
+ VTG + V G+
Sbjct: 223 -HESCEVTGGLFEVGAGW 239
|
Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250 |
| >gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 93.1 bits (231), Expect = 2e-22
Identities = 82/258 (31%), Positives = 116/258 (44%), Gaps = 25/258 (9%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTC-----SRNETELNQRIQEWKSKGLQVS 65
LK ALVTGG GIG A A GA V + ++ + I+E K + +
Sbjct: 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLP 106
Query: 66 GSVCDLKIRAQREKLMETVSSQFDGKLNILINNAG--TFIPKETTEFTEEDFSTVMTTNF 123
G + D K L+ G L+I+ AG IP + + T E F N
Sbjct: 107 GDLSDEKFA---RSLVHEAHKALGG-LDIMALVAGKQVAIP-DIADLTSEQFQKTFAINV 161
Query: 124 ESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAK 183
+ + L+Q A PLL + II SS+ P YA++K A+ ++ LA + A+
Sbjct: 162 FALFWLTQEAIPLLPKGAS--IITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAE 219
Query: 184 DKIRVNTVAPWVIRTPLL----DTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFL 239
IRVN VAP I T L T +K F + +TPM R G+P E++ V +L
Sbjct: 220 KGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQ-------QTPMKRAGQPAELAPVYVYL 272
Query: 240 CLSATSYVTGQVICVDGG 257
+SYVT +V V GG
Sbjct: 273 ASQESSYVTAEVHGVCGG 290
|
Length = 294 |
| >gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Score = 91.6 bits (228), Expect = 4e-22
Identities = 79/269 (29%), Positives = 124/269 (46%), Gaps = 31/269 (11%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
LKG T L+TG IG A+V+ + G IV ++ LN+ ++ + S+
Sbjct: 1 MLKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLV 60
Query: 70 DLKIRAQREKLMETVSSQ--FDGKLNILINNAGTFIPKETT------EFTEEDFSTVMTT 121
+L I Q E L E +S GK++ +N A P+ + + +DF+ ++
Sbjct: 61 ELDITDQ-ESLEEFLSKSAEKYGKIDGAVNCA---YPRNKDYGKKFFDVSLDDFNENLSL 116
Query: 122 NFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA--------IPMCSI--YASSKVAMN 171
+ S++ SQ K G GN++ ISS+ GV+A M S YA+ K +
Sbjct: 117 HLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAIKAGII 176
Query: 172 QLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNE 231
LTK LA + IRVN V+P I LD + FL + ML +P++
Sbjct: 177 HLTKYLAKYFKDSNIRVNCVSPGGI----LD--NQPEAFLNAYKKCCNGKGML---DPDD 227
Query: 232 VSSVVAFLCLSATSYVTGQVICVDGGYSV 260
+ + FL + Y+TGQ I VD G+S+
Sbjct: 228 ICGTLVFLLSDQSKYITGQNIIVDDGFSL 256
|
Length = 256 |
| >gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 91.8 bits (228), Expect = 5e-22
Identities = 76/259 (29%), Positives = 123/259 (47%), Gaps = 21/259 (8%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWK--SKGLQVSGS 67
S + T LVTGG GIG V L A GA V RN +L +E + V
Sbjct: 4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYE 63
Query: 68 VCDLKIRAQREKLMETVSSQFDGKLNILINNAG---TFIPKETTEFTEEDFSTVMTTNFE 124
D+ Q + ++ ++ + G+L+ +++ AG T P T+ + + + N
Sbjct: 64 PADVTDEDQVARAVDAATA-WHGRLHGVVHCAGGSETIGP--ITQIDSDAWRRTVDLNVN 120
Query: 125 -SAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAK 183
+ Y L A L++ G G+ + ISS+A Y +K A++ L K A E
Sbjct: 121 GTMYVLKHAARELVR-GGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMKLAADELGP 179
Query: 184 DKIRVNTVAPWVIRT----PLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFL 239
+RVN++ P +IRT P+ ++ E +++ TP+ R GE +V+++ FL
Sbjct: 180 SWVRVNSIRPGLIRTDLVAPITESPELSADYRAC-------TPLPRVGEVEDVANLAMFL 232
Query: 240 CLSATSYVTGQVICVDGGY 258
A S++TGQVI VDGG+
Sbjct: 233 LSDAASWITGQVINVDGGH 251
|
Length = 276 |
| >gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 91.0 bits (226), Expect = 5e-22
Identities = 73/263 (27%), Positives = 115/263 (43%), Gaps = 31/263 (11%)
Query: 1 MSDFREQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRI-QEWKS 59
M F G LV GG++GIG A+V GA V + +R+ QE +
Sbjct: 1 MGAFT-------GKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGA 53
Query: 60 KGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVM 119
+Q A R+ +++ V G L+IL+ NAG + + E +D +
Sbjct: 54 TAVQTDS--------ADRDAVIDVVRKS--GALDILVVNAGIAVFGDALELDADDIDRLF 103
Query: 120 TTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAG-VIAIPMCSIYASSKVAMNQLTKNLA 178
N + YH S A + G II I SV G + + + YA+SK A+ + + LA
Sbjct: 104 KINIHAPYHASVEAARQMP--EGGRIIIIGSVNGDRMPVAGMAAYAASKSALQGMARGLA 161
Query: 179 CEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPML--RPGEPNEVSSVV 236
++ I +N V P I T D+N + ++ + M R G P EV+ +V
Sbjct: 162 RDFGPRGITINVVQPGPIDT--------DANPANGPMKDMMHSFMAIKRHGRPEEVAGMV 213
Query: 237 AFLCLSATSYVTGQVICVDGGYS 259
A+L S+VTG + +DG +
Sbjct: 214 AWLAGPEASFVTGAMHTIDGAFG 236
|
Length = 237 |
| >gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 91.2 bits (227), Expect = 6e-22
Identities = 68/260 (26%), Positives = 110/260 (42%), Gaps = 21/260 (8%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
LKG +V+G G+G + A GA V +R L++ E G + D
Sbjct: 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTD 62
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNA---GTFIPKETTEFTEEDFSTVMTTNFESAY 127
+ Q L+ +F G+++ L+NNA + P +F + V+ N
Sbjct: 63 ITDEDQCANLVALALERF-GRVDALVNNAFRVPSMKPLADADF--AHWRAVIELNVLGTL 119
Query: 128 HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
L+Q P L +G G+I+ I+S+ + P Y +K A+ +++LA E IR
Sbjct: 120 RLTQAFTPALAESG-GSIVMINSMVLRHSQPKYGAYKMAKGALLAASQSLATELGPQGIR 178
Query: 188 VNTVAP-WVIRTPLLDTVEK---------DSNFLEHANRMVLRTPMLRPGEPNEVSSVVA 237
VN+VAP ++ PL + + E A L+ R +EV+S V
Sbjct: 179 VNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLK----RLPTDDEVASAVL 234
Query: 238 FLCLSATSYVTGQVICVDGG 257
FL +TGQ + V+ G
Sbjct: 235 FLASDLARAITGQTLDVNCG 254
|
Length = 258 |
| >gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5 | Back alignment and domain information |
|---|
Score = 90.8 bits (226), Expect = 8e-22
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 5/183 (2%)
Query: 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKI 73
T L+TG + GIG A A GA + R L + E +K V L +
Sbjct: 1 KTVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAK-FPVKVLPLQLDV 59
Query: 74 RAQREKLMETVSSQFDG--KLNILINNAGTFIPKETT-EFTEEDFSTVMTTNFESAYHLS 130
RE + + + + ++IL+NNAG + + E ED+ T++ TN + +++
Sbjct: 60 S-DRESIEAALENLPEEFRDIDILVNNAGLALGLDPAQEADLEDWETMIDTNVKGLLNVT 118
Query: 131 QLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNT 190
+L P++ + G+II + S+AG ++Y ++K A+ Q + NL + IRV
Sbjct: 119 RLILPIMIARNQGHIINLGSIAGRYPYAGGNVYCATKAAVRQFSLNLRKDLIGTGIRVTN 178
Query: 191 VAP 193
+ P
Sbjct: 179 IEP 181
|
These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249 |
| >gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 90.3 bits (224), Expect = 9e-22
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 5/203 (2%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
L LVTG + GIG A +GA V RNE +L Q +G
Sbjct: 2 LNDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEG-GRQPQWFI 60
Query: 71 LKIRAQREKLMETVSSQFD---GKLNILINNAG-TFIPKETTEFTEEDFSTVMTTNFESA 126
L + + + ++ + +L+ +++NAG +E + + V N +
Sbjct: 61 LDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQVNVNAT 120
Query: 127 YHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKI 186
+ L+Q PLL + G+++F SS G YA SK A L + LA E+ + +
Sbjct: 121 FMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAVSKFATEGLXQVLADEYQQRNL 180
Query: 187 RVNTVAPWVIRTPLLDTVEKDSN 209
RVN + P RT + + +
Sbjct: 181 RVNCINPGGTRTAMRASAFPTED 203
|
Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236 |
| >gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 90.0 bits (224), Expect = 1e-21
Identities = 64/212 (30%), Positives = 92/212 (43%), Gaps = 9/212 (4%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR 74
AL+TG + GIG A A G + +R++ L E +S G++ + DL
Sbjct: 8 RALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNP 67
Query: 75 AQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAH 134
+ + QF G ++LINNAG E D+ V+ N S +
Sbjct: 68 EAIAPGIAELLEQF-GCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVL 126
Query: 135 PLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPW 194
P +++ G G II +SS+A A P Y SK A+ TK LA E IRV T+
Sbjct: 127 PGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLG 186
Query: 195 VIRTPLLDTVEKDSNFLEHANRMVLRTPMLRP 226
+ TPL DT ++F R+ ML P
Sbjct: 187 AVNTPLWDTETVQADF--------DRSAMLSP 210
|
Length = 241 |
| >gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 91.5 bits (228), Expect = 1e-21
Identities = 53/217 (24%), Positives = 85/217 (39%), Gaps = 19/217 (8%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR 74
++TG + G+G A A GA V +R E L E ++ G + V D+
Sbjct: 10 VVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADA 69
Query: 75 AQREKLMETVSSQFDGKLNILINNAGT--FIPKETTEFTEEDFSTVMTTNFESAYHLSQL 132
+ + + G ++ +NNA F P E T E+F V + H +
Sbjct: 70 EAVQAAADRAEEEL-GPIDTWVNNAMVTVFGPFEDV--TPEEFRRVTEVTYLGVVHGTLA 126
Query: 133 AHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDK--IRVNT 190
A ++ G II + S +IP+ S Y ++K A+ T +L CE D + V
Sbjct: 127 ALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTM 186
Query: 191 VAPWVIRTPLLDTVEKDSNFLEHA-NRMVLRTPMLRP 226
V P + TP + A +R+ P P
Sbjct: 187 VQPPAVNTP----------QFDWARSRLP-VEPQPVP 212
|
Length = 334 |
| >gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 89.3 bits (222), Expect = 2e-21
Identities = 65/244 (26%), Positives = 103/244 (42%), Gaps = 21/244 (8%)
Query: 17 LVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQ 76
LV GG+ GIG A+ AA GA V SR+ L + V + D+ A
Sbjct: 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGA-PVRTAALDITDEAA 59
Query: 77 REKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPL 136
+ FD + + G + M + F AY +++ A
Sbjct: 60 VDAFFAEA-GPFDHVVITAADTPGGPVR----ALPLAAAQAAMDSKFWGAYRVARAAR-- 112
Query: 137 LKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVI 196
A G++ F+S A V + + A+ L + LA E A +RVNTV+P ++
Sbjct: 113 --IAPGGSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALELA--PVRVNTVSPGLV 168
Query: 197 RTPLLDTV---EKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVIC 253
TPL + +++ F A R+ P R G+P +V++ + F L+A + TG +
Sbjct: 169 DTPLWSKLAGDAREAMFAAAAERL----PARRVGQPEDVANAILF--LAANGFTTGSTVL 222
Query: 254 VDGG 257
VDGG
Sbjct: 223 VDGG 226
|
Length = 230 |
| >gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Score = 89.6 bits (223), Expect = 2e-21
Identities = 70/267 (26%), Positives = 118/267 (44%), Gaps = 27/267 (10%)
Query: 10 SLKGMTALVTG--GTKGIGYAVVEELAAFGA-IVHTC--SRNETELNQRIQEWKSKGLQV 64
L+G L+ G + I + + + LA GA + T R E + + +E S +
Sbjct: 3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLP 62
Query: 65 SGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKET-----TEFTEEDFSTVM 119
CD+ + L T+ ++ GKL+ L+++ F PKE + + E F M
Sbjct: 63 ----CDVTNDESIDALFATIKKKW-GKLDGLVHSIA-FAPKEELKGDYLDTSREGFLIAM 116
Query: 120 TTNFESAYHLSQLAH---PLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKN 176
SAY + LA PL+ G+I+ ++ + +P ++ +K A+ +
Sbjct: 117 DI---SAYSFTALAKAARPLMN--NGGSILTLTYLGSERVVPNYNVMGVAKAALEASVRY 171
Query: 177 LACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVV 236
LA + K+ IRVN ++ IRT L + D + N P+ R EV +
Sbjct: 172 LAADLGKEGIRVNAISAGPIRT-LAASGIGDFRKMLKENEA--NAPLRRNVTIEEVGNTA 228
Query: 237 AFLCLSATSYVTGQVICVDGGYSVTGF 263
AFL +S +TG++I VD GY + G
Sbjct: 229 AFLLSDLSSGITGEIIYVDSGYHIMGM 255
|
Length = 259 |
| >gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 89.1 bits (221), Expect = 3e-21
Identities = 62/233 (26%), Positives = 104/233 (44%), Gaps = 20/233 (8%)
Query: 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSG 66
+RW G ALVTG + GIG AV L G V C+R ++ E +S G
Sbjct: 2 ERWR--GRVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSAG---YP 56
Query: 67 SV----CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTN 122
++ CDL Q + + +Q G +++ INNAG P+ E + + N
Sbjct: 57 TLFPYQCDLSNEEQILSMFSAIRTQHQG-VDVCINNAGLARPEPLLSGKTEGWKEMFDVN 115
Query: 123 FESAYHLSQLAHPLLKSAG--NGNIIFISSVAG--VIAIPMCSIYASSKVAMNQLTKNLA 178
+ ++ A+ +K +G+II I+S++G V + + YA++K A+ LT+ L
Sbjct: 116 VLALSICTREAYQSMKERNVDDGHIININSMSGHRVPPVSVFHFYAATKHAVTALTEGLR 175
Query: 179 CE--WAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVL-RTPMLRPGE 228
E AK IR +++P ++ T + K + P L+P +
Sbjct: 176 QELREAKTHIRATSISPGLVET---EFAFKLHDNDPEKAAATYESIPCLKPED 225
|
Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 88.3 bits (219), Expect = 1e-20
Identities = 56/195 (28%), Positives = 93/195 (47%), Gaps = 6/195 (3%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
L G L+TG + GIG A E+ A GA V +R E L+ G CD
Sbjct: 38 LTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCD 97
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTE--EDFSTVMTTNFESAYH 128
L + L+ V + G ++ILINNAG I + E + D M N+ +
Sbjct: 98 LSDLDAVDALVADVEKRI-GGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLR 156
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVI--AIPMCSIYASSKVAMNQLTKNLACEWAKDKI 186
L + P + G+G+II +++ GV+ A P+ S+Y +SK A++ +++ + EW +
Sbjct: 157 LIRGLAPGMLERGDGHIINVAT-WGVLSEASPLFSVYNASKAALSAVSRVIETEWGDRGV 215
Query: 187 RVNTVAPWVIRTPLL 201
T+ ++ TP++
Sbjct: 216 HSTTLYYPLVATPMI 230
|
Length = 293 |
| >gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Score = 88.0 bits (218), Expect = 2e-20
Identities = 74/262 (28%), Positives = 120/262 (45%), Gaps = 16/262 (6%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN-ETELNQRIQEWKSKGLQVSGSVC 69
L G ALVTGG GIG ++V GA V C + + +L Q + + V C
Sbjct: 16 LLGKVALVTGGATGIGESIVRLFHKHGAKV--CIVDLQDDLGQNVCDSLGGEPNVCFFHC 73
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKET----TEFTEEDFSTVMTTNFES 125
D+ + + ++ +F G L+I++NNAG P E +E F V N +
Sbjct: 74 DVTVEDDVSRAVDFTVDKF-GTLDIMVNNAGLTGPPCPDIRNVELSE--FEKVFDVNVKG 130
Query: 126 AYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDK 185
+ + A ++ G+I+ + SVA I Y SK A+ LT+++A E K
Sbjct: 131 VFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSKHAVLGLTRSVAAELGKHG 190
Query: 186 IRVNTVAPWVIRTPL----LDTVEKDSNFLEHANRMVLRTPMLRPGE--PNEVSSVVAFL 239
IRVN V+P+ + T L L E+ + L + L+ E ++V++ V FL
Sbjct: 191 IRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANAVLFL 250
Query: 240 CLSATSYVTGQVICVDGGYSVT 261
Y++G + +DGG++ T
Sbjct: 251 ASDEARYISGLNLMIDGGFTCT 272
|
Length = 280 |
| >gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 87.1 bits (216), Expect = 2e-20
Identities = 74/271 (27%), Positives = 115/271 (42%), Gaps = 40/271 (14%)
Query: 10 SLKGMTALVTGGT--KGIGYAVVEELAAFGA-IVHT----CSRNETELNQRIQEW----- 57
LK A+VTG + GIG A+ +ELA GA I T + + ++
Sbjct: 3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEE 62
Query: 58 -KSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFS 116
G++VS DL ++L+ V+ Q G +IL+NNA T DFS
Sbjct: 63 LLKNGVKVSSMELDLTQNDAPKELLNKVTEQL-GYPHILVNNA--------AYSTNNDFS 113
Query: 117 TVMTTNFESAYHL---------SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167
+ + Y + SQ A K +G G II ++S + YA++K
Sbjct: 114 NLTAEELDKHYMVNVRATTLLSSQFARGFDKKSG-GRIINMTSGQFQGPMVGELAYAATK 172
Query: 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPG 227
A++ LT +LA E A I VN + P T + E ++ P R G
Sbjct: 173 GAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTE--------EIKQGLLPMFPFGRIG 224
Query: 228 EPNEVSSVVAFLCLSATSYVTGQVICVDGGY 258
EP + + ++ FL ++TGQ+I +GG+
Sbjct: 225 EPKDAARLIKFLASEEAEWITGQIIHSEGGF 255
|
Length = 256 |
| >gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 87.4 bits (217), Expect = 2e-20
Identities = 65/260 (25%), Positives = 107/260 (41%), Gaps = 19/260 (7%)
Query: 12 KGMTALVTGGTKGIGYAVVEELAAFG---AIVHTCSRNETELNQRIQEWKSKGLQVSGSV 68
A+V GG + +G + LA G A+ S + Q I +G G
Sbjct: 1 MNQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEG-MAYGFG 59
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTN----FE 124
D L V F G++++L+ NAG T+F DF + N F
Sbjct: 60 ADATSEQSVLALSRGVDEIF-GRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFL 118
Query: 125 SAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKD 184
A S+L +++ G II I+S +G + S Y+++K LT++LA + A+
Sbjct: 119 CAREFSRL---MIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEY 175
Query: 185 KIRVNTVAPW-VIRTP----LLDTVEKDSNFLEHANRMVL--RTPMLRPGEPNEVSSVVA 237
I V+++ ++++P LL K + P+ R + +V +++
Sbjct: 176 GITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLL 235
Query: 238 FLCLSATSYVTGQVICVDGG 257
F SY TGQ I V GG
Sbjct: 236 FYASPKASYCTGQSINVTGG 255
|
Length = 259 |
| >gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 86.5 bits (215), Expect = 3e-20
Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 2/186 (1%)
Query: 17 LVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQ 76
+TG GIG A AA G V NE L E + +G++ D+ RA
Sbjct: 5 FITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNA-WTGAL-DVTDRAA 62
Query: 77 REKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPL 136
+ + ++ G+L++L NNAG + E V+ N + + + A P
Sbjct: 63 WDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPY 122
Query: 137 LKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVI 196
LK+ +I SS + + P ++Y+++K A+ LT+ L EW + IRV V P +
Sbjct: 123 LKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFV 182
Query: 197 RTPLLD 202
T +LD
Sbjct: 183 DTAMLD 188
|
Length = 260 |
| >gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR | Back alignment and domain information |
|---|
Score = 84.9 bits (211), Expect = 1e-19
Identities = 67/268 (25%), Positives = 120/268 (44%), Gaps = 36/268 (13%)
Query: 13 GMTALVTG--GTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSV-- 68
G L+TG + I + + + L GA + + L +R+++ ++ L S V
Sbjct: 1 GKRILITGIANDRSIAWGIAKALHEAGAEL-AFTYQPEALRKRVEKL-AERLGESALVLP 58
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETT-----EFTEEDFSTVMTTNF 123
CD+ + ++L V + GKL+ L+++ F PK + + + F +
Sbjct: 59 CDVSNDEEIKELFAEVKKDW-GKLDGLVHSIA-FAPKVQLKGPFLDTSRKGFLKALDI-- 114
Query: 124 ESAYHLSQLAH---PLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACE 180
SAY L LA P++ G+I+ +S + +P ++ +K A+ + LA E
Sbjct: 115 -SAYSLVSLAKAALPIMNP--GGSIVTLSYLGSERVVPGYNVMGVAKAALESSVRYLAYE 171
Query: 181 WAKDKIRVNTVAPWVIRT------PLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSS 234
+ IRVN ++ I+T D + LE++ + P+ R EV +
Sbjct: 172 LGRKGIRVNAISAGPIKTLAASGITGFDKM------LEYSEQR---APLGRNVTAEEVGN 222
Query: 235 VVAFLCLSATSYVTGQVICVDGGYSVTG 262
AFL +S +TG++I VDGGY + G
Sbjct: 223 TAAFLLSDLSSGITGEIIYVDGGYHIMG 250
|
This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9 | Back alignment and domain information |
|---|
Score = 84.4 bits (209), Expect = 1e-19
Identities = 49/199 (24%), Positives = 81/199 (40%), Gaps = 16/199 (8%)
Query: 18 VTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC-----DLK 72
+TG GIG A G V +E L + ++ D+
Sbjct: 5 ITGAASGIGRETALLFARNGWFVGLYDIDEDGL-------AALAAELGAENVVAGALDVT 57
Query: 73 IRAQREKLMETVSSQFDGKLNILINNAG--TFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
RA + ++ G+L+ L NNAG P E ++ N + + +
Sbjct: 58 DRAAWAAALADFAAATGGRLDALFNNAGVGRGGPFEDVPL--AAHDRMVDINVKGVLNGA 115
Query: 131 QLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNT 190
A P LK+ +I +S + + P ++Y+++K A+ LT+ L EWA+ IRV
Sbjct: 116 YAALPYLKATPGARVINTASSSAIYGQPDLAVYSATKFAVRGLTEALDVEWARHGIRVAD 175
Query: 191 VAPWVIRTPLLDTVEKDSN 209
V PW + TP+L E +
Sbjct: 176 VWPWFVDTPILTKGETGAA 194
|
This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227 |
| >gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 84.0 bits (208), Expect = 3e-19
Identities = 77/270 (28%), Positives = 124/270 (45%), Gaps = 32/270 (11%)
Query: 11 LKGMTALVTG--GTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSV 68
L G ALVTG + I + + ++L A GA + T L ++ K +++ +
Sbjct: 4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGI-----TYLPDEKGRFEKKVRELTEPL 58
Query: 69 -------CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKET-----TEFTEEDFS 116
CD++ AQ E+ ET+ ++ GKL+IL++ F KE + + E F+
Sbjct: 59 NPSLFLPCDVQDDAQIEETFETIKQKW-GKLDILVHCLA-FAGKEELIGDFSATSREGFA 116
Query: 117 TVMTTNFESAYHLSQLAH---PLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQL 173
+ SAY L+ L PL+ G+I+ ++ + GV AIP ++ +K A+
Sbjct: 117 RALEI---SAYSLAPLCKAAKPLMSE--GGSIVTLTYLGGVRAIPNYNVMGVAKAALEAS 171
Query: 174 TKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVS 233
+ LA E IRVN ++ IRT V L+ + + + P+ R EV
Sbjct: 172 VRYLAAELGPKNIRVNAISAGPIRTLASSAV---GGILDMIHHVEEKAPLRRTVTQTEVG 228
Query: 234 SVVAFLCLSATSYVTGQVICVDGGYSVTGF 263
+ AFL S +TGQ I VD GY + G
Sbjct: 229 NTAAFLLSDLASGITGQTIYVDAGYCIMGM 258
|
Length = 258 |
| >gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 83.2 bits (206), Expect = 5e-19
Identities = 73/253 (28%), Positives = 112/253 (44%), Gaps = 20/253 (7%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKI 73
T LVTGG++G+G A+ A GA +V ++E E + + + V D
Sbjct: 7 TVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTD--- 63
Query: 74 RAQREKLMETVSSQFDGKLNILINNA---GTFIP---KETTEFTEEDFSTVMTTNFESAY 127
R Q + + T + F + ++NNA +F K+ + T EDF + + + A
Sbjct: 64 REQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGAL 123
Query: 128 HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSI--YASSKVAMNQLTKNLACEWAKDK 185
+ Q A P ++ G G II I + + P+ Y ++K A+ LT+NLA E
Sbjct: 124 NTIQAALPGMREQGFGRIINIGT--NLFQNPVVPYHDYTTAKAALLGLTRNLAAELGPYG 181
Query: 186 IRVNTVAPWVIRTPLLDTVEKDSNF-LEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244
I VN V+ ++RT D F L A TP+ + P E + V F
Sbjct: 182 ITVNMVSGGLLRTTDASAATPDEVFDLIAAT-----TPLRKVTTPQEFADAVLFFASPWA 236
Query: 245 SYVTGQVICVDGG 257
VTGQ + VDGG
Sbjct: 237 RAVTGQNLVVDGG 249
|
Length = 253 |
| >gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Score = 83.3 bits (206), Expect = 5e-19
Identities = 79/268 (29%), Positives = 119/268 (44%), Gaps = 25/268 (9%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS-KGLQVSGSVC 69
LKG LVTGG G+G A+V+ A GA V ++ +QE ++ G V G
Sbjct: 3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSA----AGLQELEAAHGDAVVGVEG 58
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTF--------IPKETTEFTEEDFSTVMTT 121
D++ ++ + + F GK++ LI NAG + IP + +E F V
Sbjct: 59 DVRSLDDHKEAVARCVAAF-GKIDCLIPNAGIWDYSTALVDIPDDR---IDEAFDEVFHI 114
Query: 122 NFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEW 181
N + + A P L A G++IF S AG +Y ++K A+ L K LA E
Sbjct: 115 NVKGYLLAVKAALPAL-VASRGSVIFTISNAGFYPNGGGPLYTAAKHAVVGLVKELAFEL 173
Query: 182 AKDKIRVNTVAPWVIRTPL-----LDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVS-SV 235
A +RVN VAP + + L L +K + + + + P+ R + E + +
Sbjct: 174 AP-YVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAY 232
Query: 236 VAFLCLSATSYVTGQVICVDGGYSVTGF 263
V F T TG V+ DGG V GF
Sbjct: 233 VFFATRGDTVPATGAVLNYDGGMGVRGF 260
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262 |
| >gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 82.6 bits (205), Expect = 8e-19
Identities = 59/194 (30%), Positives = 86/194 (44%), Gaps = 9/194 (4%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG-LQVSGSVC 69
LK LVTG GIG A GA V R E +L E ++ G Q +
Sbjct: 10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPL 69
Query: 70 DLK--IRAQREKLMETVSSQFDGKLNILINNA---GTFIPKETTEFTEEDFSTVMTTNFE 124
DL ++L +T+ QF G+L+ +++NA G P E + E + VM N
Sbjct: 70 DLLTATPQNYQQLADTIEEQF-GRLDGVLHNAGLLGELGPME--QQDPEVWQDVMQVNVN 126
Query: 125 SAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKD 184
+ + L+Q PLL + +++F SS G YA SK A + + LA E+
Sbjct: 127 ATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAVSKFATEGMMQVLADEYQGT 186
Query: 185 KIRVNTVAPWVIRT 198
+RVN + P RT
Sbjct: 187 NLRVNCINPGGTRT 200
|
Length = 247 |
| >gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7 | Back alignment and domain information |
|---|
Score = 82.5 bits (204), Expect = 8e-19
Identities = 59/195 (30%), Positives = 89/195 (45%), Gaps = 16/195 (8%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAI-VHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
+K T LVTG +GIG A VE L A GA V+ R+ + ++ K + + V
Sbjct: 1 IKDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAAHLVAKYGDKVVPLRLDVT 60
Query: 70 DLK-IRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTV---MTTNFES 125
D + I+A + + ++++INNAG P E E + M N
Sbjct: 61 DPESIKAAAAQAKD---------VDVVINNAGVLKPATLLE--EGALEALKQEMDVNVFG 109
Query: 126 AYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDK 185
L+Q P+LK+ G G I+ ++SVA + P Y++SK A LT+ L E A
Sbjct: 110 LLRLAQAFAPVLKANGGGAIVNLNSVASLKNFPAMGTYSASKSAAYSLTQGLRAELAAQG 169
Query: 186 IRVNTVAPWVIRTPL 200
V +V P I T +
Sbjct: 170 TLVLSVHPGPIDTRM 184
|
These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235 |
| >gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 81.9 bits (203), Expect = 9e-19
Identities = 60/232 (25%), Positives = 96/232 (41%), Gaps = 26/232 (11%)
Query: 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKI 73
TAL+TG ++GIG A+ ELA + R L++ E + DL
Sbjct: 4 PTALITGASRGIGAAIARELAP-THTLLLGGRPAERLDELAAELPG----ATPFPVDL-- 56
Query: 74 RAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLA 133
E + V G+L++L++NAG E T +++ + N + L++L
Sbjct: 57 -TDPEAIAAAVEQL--GRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLL 113
Query: 134 HPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAP 193
P L++A G+++FI+S AG+ A P YA+SK A+ L L E +RV +V P
Sbjct: 114 LPALRAAH-GHVVFINSGAGLRANPGWGSYAASKFALRALADALREEEP-GNVRVTSVHP 171
Query: 194 WVIRTPLLDTVEKD-------SNFLE-----HANRMVLRTPMLRPGEPNEVS 233
T + + +L A R + P EV
Sbjct: 172 GRTDTDMQRGLVAQEGGEYDPERYLRPETVAKAVRFAVDAP--PDAHITEVV 221
|
Length = 227 |
| >gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 82.1 bits (203), Expect = 9e-19
Identities = 64/248 (25%), Positives = 109/248 (43%), Gaps = 17/248 (6%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
LKG + G ++G+GYAV GA V SRNE +L +R+++ SK + V D
Sbjct: 3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKL-KRMKKTLSKYGNIHYVVGD 61
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
+ ++E + + ++ L+ G ++ EF+ + ++T + + +
Sbjct: 62 VSSTESARNVIEKAAKVLNA-IDGLVVTVGGYVEDTVEEFSGLE--EMLTNHIKIPLYAV 118
Query: 131 QLAHPLLKSAGNGNIIFISSVAGV-IAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
+ LK +I+ +SS++G+ A P YA +K + + + LA E IRVN
Sbjct: 119 NASLRFLKEG--SSIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEILASELLGRGIRVN 176
Query: 190 TVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTG 249
+AP I +F N LR P + + V+ +L +V G
Sbjct: 177 GIAPTTI----------SGDFEPERNWKKLRKLGDDMAPPEDFAKVIIWLLTDEADWVDG 226
Query: 250 QVICVDGG 257
VI VDGG
Sbjct: 227 VVIPVDGG 234
|
Length = 238 |
| >gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 81.7 bits (202), Expect = 2e-18
Identities = 72/262 (27%), Positives = 118/262 (45%), Gaps = 23/262 (8%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA---IVHTCS-RNETELNQRIQEWKSKGLQVS 65
SLKG L+ GG K +G + +LAA GA +H S ++ + + + K+ G +
Sbjct: 5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAV 64
Query: 66 GSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFES 125
DL A EKL + + F G+ +I IN G + K E +E ++ + N +S
Sbjct: 65 AFQADLTTAAAVEKLFDDAKAAF-GRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKS 123
Query: 126 AYHLSQLAHPLLKSAG-----NGNIIFI-SSVAGVIAIPMCSIYASSKVAMNQLTKNLAC 179
A+ +K AG NG I+ + +S+ G P S YA SK + T+ +
Sbjct: 124 AFF-------FIKEAGRHLNDNGKIVTLVTSLLGAFT-PFYSAYAGSKAPVEHFTRAASK 175
Query: 180 EWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPG--EPNEVSSVVA 237
E+ I V V P + TP E H L +P + G + ++ +
Sbjct: 176 EFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAAL-SPFSKTGLTDIEDIVPFIR 234
Query: 238 FLCLSATSYVTGQVICVDGGYS 259
FL ++ ++TGQ I ++GGY+
Sbjct: 235 FL-VTDGWWITGQTILINGGYT 255
|
Length = 257 |
| >gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Score = 81.1 bits (201), Expect = 2e-18
Identities = 68/256 (26%), Positives = 117/256 (45%), Gaps = 36/256 (14%)
Query: 14 MTA--LVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDL 71
M A L+TG + IG A+ L A G V R +++ ++ +Q D
Sbjct: 1 MPAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQ-----ADF 55
Query: 72 KIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQ 131
A ++ + DG L +I+NA ++ ++ + + +M + + Y L+
Sbjct: 56 STNAGIMAFIDELKQHTDG-LRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNL 114
Query: 132 LAHPLLKSAGNG--NIIFISS-VA--GV---IAIPMCSIYASSKVAMNQLTKNLACEWAK 183
LL+ G+ +II I+ V G IA YA+SK A++ +T + A + A
Sbjct: 115 ALEDLLRGHGHAASDIIHITDYVVEKGSDKHIA------YAASKAALDNMTLSFAAKLAP 168
Query: 184 DKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLR--PGEPNEVSSVVAFLCL 241
+++VN++AP +I L + E D + L +L+ PGE E+ +V +L
Sbjct: 169 -EVKVNSIAPALI---LFN--EGDD---AAYRQKALAKSLLKIEPGE-EEIIDLVDYLLT 218
Query: 242 SATSYVTGQVICVDGG 257
S YVTG+ + VDGG
Sbjct: 219 S--CYVTGRSLPVDGG 232
|
Length = 236 |
| >gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 80.8 bits (199), Expect = 5e-18
Identities = 54/195 (27%), Positives = 96/195 (49%), Gaps = 2/195 (1%)
Query: 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLK 72
G A++TGG GIG A E A GA V ++ L Q + +++G V G +CD++
Sbjct: 6 GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVR 65
Query: 73 IRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQL 132
R + L + + + G ++++ +NAG + E T +D+ V+ + + H +
Sbjct: 66 HREEVTHLADE-AFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEA 124
Query: 133 AHP-LLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTV 191
P LL+ G+++F +S AG++ Y +K + L + LA E D I V+ +
Sbjct: 125 FLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVL 184
Query: 192 APWVIRTPLLDTVEK 206
P V+ T L+ E+
Sbjct: 185 CPMVVETNLVANSER 199
|
Length = 275 |
| >gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 80.9 bits (200), Expect = 5e-18
Identities = 50/194 (25%), Positives = 92/194 (47%), Gaps = 3/194 (1%)
Query: 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC-DLK 72
VTG GIG A LAA GA + R+ L Q + + ++ G V D+
Sbjct: 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDIS 60
Query: 73 IRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQ- 131
+ + G +++++N AG T E + ++ N H+ +
Sbjct: 61 DYDAVAAFAADIHAAH-GSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIET 119
Query: 132 LAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTV 191
P++ + G+++ +SS AG++A+P + Y++SK + L++ L + A+ I V+ V
Sbjct: 120 FVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVV 179
Query: 192 APWVIRTPLLDTVE 205
P ++TPL++TVE
Sbjct: 180 VPGAVKTPLVNTVE 193
|
Length = 272 |
| >gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 79.6 bits (197), Expect = 1e-17
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 17/199 (8%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQ-VSGSVCDLKI 73
ALVTG + GIG A E+LA G V SRN ++ + V D+
Sbjct: 6 VALVTGASSGIGRATAEKLARAGYRVFGTSRNPA---------RAAPIPGVELLELDVTD 56
Query: 74 RAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLA 133
A + ++ V ++ G++++L+NNAG + E + + TN +++
Sbjct: 57 DASVQAAVDEVIARA-GRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAV 115
Query: 134 HPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAP 193
P +++ G+G II ISSV G + P ++YA+SK A+ +++L E + IRV+ V P
Sbjct: 116 LPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEP 175
Query: 194 WVIRTPLLDTVEKDSNFLE 212
+T D+N E
Sbjct: 176 AYTKTNF------DANAPE 188
|
Length = 270 |
| >gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 79.2 bits (196), Expect = 2e-17
Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 11/194 (5%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
L+G +TGG +GIG A LAA GA V +E + E V G
Sbjct: 2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG----LVVGGPL 57
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTV---MTTNFESA 126
D+ A ++ V + G +++L+NNAG +P F +E + + N
Sbjct: 58 DVTDPASFAAFLDAVEADL-GPIDVLVNNAGV-MP--VGPFLDEPDAVTRRILDVNVYGV 113
Query: 127 YHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKI 186
S+LA P + G G+++ ++S+AG I +P + Y +SK A+ T E +
Sbjct: 114 ILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDAARLELRGTGV 173
Query: 187 RVNTVAPWVIRTPL 200
V+ V P + T L
Sbjct: 174 HVSVVLPSFVNTEL 187
|
Length = 273 |
| >gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 79.1 bits (195), Expect = 4e-17
Identities = 69/264 (26%), Positives = 115/264 (43%), Gaps = 35/264 (13%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIV----HTCSRNETELNQRIQEWKSKGLQVS 65
L G A+VTG G+G A LA GA V + + +++ I+ +K + V+
Sbjct: 9 DLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVA 68
Query: 66 GSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVM------ 119
G + RA ++L+ T + G L+I++NNAG + ++E++ V+
Sbjct: 69 GDISQ---RATADELVAT--AVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRG 123
Query: 120 ---TTNFESAYHLSQLAHPLLKSAGN---GNIIFISSVAGVIAIPMCSIYASSKVAMNQL 173
T +AY ++ K+AG G I+ SS AG++ + Y ++K + L
Sbjct: 124 HFLLTRNAAAYWRAK-----AKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGITAL 178
Query: 174 TKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVS 233
T + A + +R N + P RT + V D+ +E + P P V
Sbjct: 179 TLSAARALGRYGVRANAICPRA-RTAMTADVFGDAPDVEAGG--------IDPLSPEHVV 229
Query: 234 SVVAFLCLSATSYVTGQVICVDGG 257
+V FL A + V GQV V G
Sbjct: 230 PLVQFLASPAAAEVNGQVFIVYGP 253
|
Length = 306 |
| >gnl|CDD|237099 PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 77.3 bits (191), Expect = 6e-17
Identities = 52/210 (24%), Positives = 79/210 (37%), Gaps = 63/210 (30%)
Query: 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNII 146
G+++ L N AG +P V NF HL++ P + + G G I+
Sbjct: 44 ALPGRIDALFNIAG--VPGTA------PVELVARVNFLGLRHLTEALLPRM-APG-GAIV 93
Query: 147 FISSVAGV-----------------------------IAIPMCSIYASSKVAMNQLTKNL 177
++S+AG +A+ Y SK A+ T
Sbjct: 94 NVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATG--YQLSKEALILWTMRQ 151
Query: 178 ACEWAKDK-IRVNTVAPWVIRTPLLDT---------VEKDSNFLEHANRMVLRTPMLRPG 227
A W + IRVN VAP + TP+L V+ D+ M RP
Sbjct: 152 AQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDA------------KRMGRPA 199
Query: 228 EPNEVSSVVAFLCLSATSYVTGQVICVDGG 257
+E ++V+ FLC A ++ G + VDGG
Sbjct: 200 TADEQAAVLVFLCSDAARWINGVNLPVDGG 229
|
Length = 241 |
| >gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 74.6 bits (184), Expect = 9e-16
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQV-SGSVCDLKI 73
ALVTG + GIG A LAA G V+ +R ++++ S G+ S V D
Sbjct: 5 VALVTGASSGIGKATARRLAAQGYTVYGAARRV----DKMEDLASLGVHPLSLDVTD--- 57
Query: 74 RAQREKLMETVSSQFDGKLNILINNAG--TFIPKETTEFTE--EDFSTVMTTNFESAYHL 129
A + ++T+ ++ +G++++L+NNAG ++ E E F N A L
Sbjct: 58 EASIKAAVDTIIAE-EGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEV----NLFGAARL 112
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
+QL P +++ +G II ISS+ G I P+ + Y ++K A+ + L E A I V
Sbjct: 113 TQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALEGFSDALRLEVAPFGIDVV 172
Query: 190 TVAPWVIRTPL-------LDTVEKDSNFLEHANRM 217
+ P I+T L + + E A +
Sbjct: 173 VIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAV 207
|
Length = 273 |
| >gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 73.7 bits (181), Expect = 2e-15
Identities = 71/253 (28%), Positives = 112/253 (44%), Gaps = 12/253 (4%)
Query: 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKI 73
M LVT ++GIG+ V EL GA V SRNE L + ++E K G +V DL
Sbjct: 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG-EVYAVKADLSD 59
Query: 74 RAQREKLMETVSSQFDGKLNILINNAGTFI--PKETTEFTEEDFSTVMTTNFESAYHLSQ 131
+ + L++ + + G ++ L+ NAG P E D+ + + +L+
Sbjct: 60 KDDLKNLVKE-AWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTT 118
Query: 132 LAHP-LLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNT 190
L L+ G ++++SSV+ +P + ++ + QL K ++ + IR T
Sbjct: 119 LLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYT 178
Query: 191 VAPWVIRTP-----LLDTVEKDSNFLEHA-NRMVL-RTPMLRPGEPNEVSSVVAFLCLSA 243
V TP L E+ E R VL RTP+ R G E+ S++AFL
Sbjct: 179 VLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLIAFLLSEN 238
Query: 244 TSYVTGQVICVDG 256
Y+ G I DG
Sbjct: 239 AEYMLGSTIVFDG 251
|
Length = 259 |
| >gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 72.8 bits (179), Expect = 3e-15
Identities = 60/194 (30%), Positives = 87/194 (44%), Gaps = 14/194 (7%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR 74
+ L+TG + GIG EL G V R ++ R+ L +G + DL
Sbjct: 4 SVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDV-ARMNS-----LGFTGILLDLDDP 57
Query: 75 AQREKLMETVSSQFDGKLNILINNAG--TFIPKETT--EFTEEDFSTVMTTNFESAYHLS 130
E+ + V + D +L L NNAG + P T + E+ FST NF + L+
Sbjct: 58 ESVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFST----NFFGTHQLT 113
Query: 131 QLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNT 190
L P + G G I+ SSV G+I+ P YA+SK A+ + L E I+V+
Sbjct: 114 MLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDALRMELRHSGIKVSL 173
Query: 191 VAPWVIRTPLLDTV 204
+ P IRT D V
Sbjct: 174 IEPGPIRTRFTDNV 187
|
Length = 256 |
| >gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 72.2 bits (178), Expect = 4e-15
Identities = 62/196 (31%), Positives = 88/196 (44%), Gaps = 20/196 (10%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAI-VHTCSRNE---TELNQRIQEWKSKGLQVS 65
+KG LVTG +GIG A VE+L A GA V+ +R+ T+L R+ LQ+
Sbjct: 3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTDLGPRVVP-----LQL- 56
Query: 66 GSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETT-EFTEEDFSTVMTTNFE 124
D+ A E S + IL+NNAG F E E+ M TN+
Sbjct: 57 ----DVTDPASVAAAAEAASD-----VTILVNNAGIFRTGSLLLEGDEDALRAEMETNYF 107
Query: 125 SAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKD 184
+++ P+L + G G I+ + SV + P Y++SK A LT+ L E A
Sbjct: 108 GPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRAELAPQ 167
Query: 185 KIRVNTVAPWVIRTPL 200
RV V P I T +
Sbjct: 168 GTRVLGVHPGPIDTDM 183
|
Length = 238 |
| >gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated | Back alignment and domain information |
|---|
Score = 71.8 bits (176), Expect = 8e-15
Identities = 77/251 (30%), Positives = 113/251 (45%), Gaps = 16/251 (6%)
Query: 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLK 72
G ALVTG +GIG + L A G V + + E ++ K+ G D+
Sbjct: 10 GRVALVTGAARGIGLGIAAWLIAEGWQV-VLADLDRERGSKVA--KALGENAWFIAMDVA 66
Query: 73 IRAQREKLMETVSSQFDGKLNILINNAGTFIPKETT--EFTEEDFSTVMTTNFESAYHLS 130
AQ + V QF G+L+ L+ NA P TT + ++ V+ N L+
Sbjct: 67 DEAQVAAGVAEVLGQF-GRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLA 125
Query: 131 QLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNT 190
+ P L+ A NG I+ ++S + P YA+SK + LT LA + IRVN
Sbjct: 126 KHCAPYLR-AHNGAIVNLASTRARQSEPDTEAYAASKGGLLALTHALAISLGPE-IRVNA 183
Query: 191 VAP-WV-IRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248
V+P W+ R P E S +HA P R G +V+++VA+L +VT
Sbjct: 184 VSPGWIDARDPSQRRAEPLSEA-DHAQH-----PAGRVGTVEDVAAMVAWLLSRQAGFVT 237
Query: 249 GQVICVDGGYS 259
GQ VDGG +
Sbjct: 238 GQEFVVDGGMT 248
|
Length = 255 |
| >gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 71.6 bits (176), Expect = 8e-15
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 27/210 (12%)
Query: 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET-ELNQRIQEWKSKGLQVSGSVCDLKIR 74
++TG ++G+G A+ +L G V + SR E EL + +++ S S DL+
Sbjct: 4 VIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHS---LDLQDV 60
Query: 75 AQREKLMETVSSQF--DGKLNI-LINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQ 131
+ E + S D +I LINNAG P + E E + + HL+
Sbjct: 61 HELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESE-------ELITNVHLNL 113
Query: 132 LAHPLLKSA----------GNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEW 181
LA P++ ++ + +I ISS A S Y SSK ++ T+ +A E
Sbjct: 114 LA-PMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSKAGLDMFTQTVATEQ 172
Query: 182 AKDKIRVNTVA--PWVIRTPLLDTVEKDSN 209
+++ V VA P V+ T + + S
Sbjct: 173 EEEEYPVKIVAFSPGVMDTNMQAQIRSSSK 202
|
Length = 251 |
| >gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 71.2 bits (175), Expect = 2e-14
Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 9/196 (4%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
G A++TG G G A AA G + + L++ + E +++G +V G D
Sbjct: 4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTD 63
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
+ AQ E L + +F G +++L NNAG E + D+ V+ N H
Sbjct: 64 VSDAAQVEALADAALERF-GAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGV 122
Query: 131 QLAHPLLKSAG------NGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNL--ACEWA 182
+ PL+ +A G+I+ +S+AG++A P IY SK A+ LT+ L
Sbjct: 123 RAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNVSKHAVVSLTETLYQDLSLV 182
Query: 183 KDKIRVNTVAPWVIRT 198
D++ + + P+ + T
Sbjct: 183 TDQVGASVLCPYFVPT 198
|
Length = 287 |
| >gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 71.2 bits (175), Expect = 2e-14
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 2/190 (1%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR 74
A+VTG + G G ELA G +V RN + + + LQ + V L +
Sbjct: 5 IAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVT 64
Query: 75 AQRE-KLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLA 133
Q + V + G++++L+NNAG E E++ TN A ++Q
Sbjct: 65 DQNSIHNFQLVLKEI-GRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAV 123
Query: 134 HPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAP 193
P ++ +G II ISS++G + P S Y SSK A+ +++L E I V + P
Sbjct: 124 LPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEP 183
Query: 194 WVIRTPLLDT 203
T + +
Sbjct: 184 GSYNTNIWEV 193
|
Length = 280 |
| >gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 70.8 bits (174), Expect = 2e-14
Identities = 44/194 (22%), Positives = 80/194 (41%), Gaps = 8/194 (4%)
Query: 17 LVTGGTKGIGYAVVEELAAFGAIVH-TCSRNETELNQRIQEWKSKGLQ-VSGSVCDLKIR 74
L+TG G G + ++L + G V C + ++ S L+ + V +
Sbjct: 4 LITGCDSGFGNLLAKKLDSLGFTVLAGCLTKNGPGAKELRRVCSDRLRTLQLDVTKPE-- 61
Query: 75 AQREKLMETVSSQFDGK-LNILINNAGTFIPKETTEFTE-EDFSTVMTTNFESAYHLSQL 132
Q ++ + V K L L+NNAG E +D+ M N +++
Sbjct: 62 -QIKRAAQWVKEHVGEKGLWGLVNNAGILGFGGDEELLPMDDYRKCMEVNLFGTVEVTKA 120
Query: 133 AHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVA 192
PLL+ A G ++ +SS+ G + P Y +SK A+ + +L E ++V+ +
Sbjct: 121 FLPLLRRA-KGRVVNVSSMGGRVPFPAGGAYCASKAAVEAFSDSLRRELQPWGVKVSIIE 179
Query: 193 PWVIRTPLLDTVEK 206
P +T + E
Sbjct: 180 PGNFKTGITGNSEL 193
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281 |
| >gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 70.0 bits (171), Expect = 3e-14
Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 5/195 (2%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSV- 68
+L T LVTG ++G+G V + AA GA V +R++ +L + G ++
Sbjct: 3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIR 62
Query: 69 CDLKIRAQRE--KLMETVSSQFDGKLNILINNAGTFIPKETTEF-TEEDFSTVMTTNFES 125
DL ++E + T++ GKL+ +++ AG F +F T ++ N +
Sbjct: 63 FDLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVA 122
Query: 126 AYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAK-D 184
L++ PLLK + + ++IF+ G + +SK A+N L K A EW +
Sbjct: 123 PMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGASKAALNYLCKVAADEWERFG 182
Query: 185 KIRVNTVAPWVIRTP 199
+R N + P I +P
Sbjct: 183 NLRANVLVPGPINSP 197
|
Length = 239 |
| >gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 69.4 bits (170), Expect = 5e-14
Identities = 62/262 (23%), Positives = 110/262 (41%), Gaps = 24/262 (9%)
Query: 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGSVCD 70
A+V GG + +G + LA G V N + E ++ G + G D
Sbjct: 1 MNQVAVVIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVADEINAEYGEKAYGFGAD 60
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTN----FESA 126
L + V F ++++L+ +AG + T+F DF + N F A
Sbjct: 61 ATNEQSVIALSKGVDEIFK-RVDLLVYSAGIAKSAKITDFELGDFDRSLQVNLVGYFLCA 119
Query: 127 YHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKI 186
S+L +++ G II I+S +G + S Y+++K LT++LA + A+ I
Sbjct: 120 REFSKL---MIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEHGI 176
Query: 187 RVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVL-----------RTPMLRPGEPNEVSSV 235
VN++ LL + S ++A ++ + + P+ R + +V ++
Sbjct: 177 TVNSLML----GNLLKSPMFQSLLPQYAKKLGIKESEVEQYYIDKVPLKRGCDYQDVLNM 232
Query: 236 VAFLCLSATSYVTGQVICVDGG 257
+ F SY TGQ I + GG
Sbjct: 233 LLFYASPKASYCTGQSINITGG 254
|
Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 68.4 bits (168), Expect = 5e-14
Identities = 46/186 (24%), Positives = 71/186 (38%), Gaps = 27/186 (14%)
Query: 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSV-CDLKIR 74
+V G T IG AV + L+A G V T R+ SG D+
Sbjct: 1 IIVIGATGTIGLAVAQLLSAHGHEVITAGRS------------------SGDYQVDITDE 42
Query: 75 AQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAH 134
A + L E V G + +++ AG E T+ DF + + +L +
Sbjct: 43 ASIKALFEKV-----GHFDAIVSTAGDAEFAPLAELTDADFQRGLNSKLLGQINLVRHGL 97
Query: 135 PLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPW 194
P L G+I S + IP + A+ A+ + A E + IR+N V+P
Sbjct: 98 PYLND--GGSITLTSGILAQRPIPGGAAAATVNGALEGFVRAAAIELPRG-IRINAVSPG 154
Query: 195 VIRTPL 200
V+ L
Sbjct: 155 VVEESL 160
|
Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198 |
| >gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 69.3 bits (170), Expect = 6e-14
Identities = 49/187 (26%), Positives = 87/187 (46%), Gaps = 1/187 (0%)
Query: 17 LVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQ 76
++TG G+G A+ A G + NE + ++ + G CD++ +Q
Sbjct: 4 MITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQ 63
Query: 77 REKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPL 136
L + ++ G +++++NNAG E + ED+ + N + PL
Sbjct: 64 LTALAQACEEKWGG-IDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPL 122
Query: 137 LKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVI 196
K +G I+ I+S+AG++ P S Y +K + L++ L E A D+I V+ V P
Sbjct: 123 FKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFF 182
Query: 197 RTPLLDT 203
+T LLD+
Sbjct: 183 QTNLLDS 189
|
Length = 270 |
| >gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 70.6 bits (174), Expect = 6e-14
Identities = 75/257 (29%), Positives = 117/257 (45%), Gaps = 31/257 (12%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTC---SRNETELNQRIQEWKSKGLQVSGS 67
L G ALVTG +GIG A+ E LA GA V C L V G+
Sbjct: 208 LAGKVALVTGAARGIGAAIAEVLARDGAHV-VCLDVPAAGEALAAVANR-------VGGT 259
Query: 68 VCDLKIRAQR--EKLMETVSSQFDGKLNILINNAGTFIPKETT--EFTEEDFSTVMTTNF 123
L I A ++ E ++ + G L+I+++NAG I ++ T E + +V+ N
Sbjct: 260 ALALDITAPDAPARIAEHLAERH-GGLDIVVHNAG--ITRDKTLANMDEARWDSVLAVNL 316
Query: 124 ESAYHLSQ--LAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEW 181
+ +++ LA L G I+ +SS++G+ + YA+SK + L + LA
Sbjct: 317 LAPLRITEALLAAGALGD--GGRIVGVSSISGIAGNRGQTNYAASKAGVIGLVQALAPLL 374
Query: 182 AKDKIRVNTVAPWVIRTPLLDTVEKDSNFL--EHANRMVLRTPMLRPGEPNEVSSVVAFL 239
A+ I +N VAP I T + + F E RM + + G P +V+ +A+L
Sbjct: 375 AERGITINAVAPGFIETQMTAAIP----FATREAGRRM---NSLQQGGLPVDVAETIAWL 427
Query: 240 CLSATSYVTGQVICVDG 256
A+ VTG V+ V G
Sbjct: 428 ASPASGGVTGNVVRVCG 444
|
Length = 450 |
| >gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase | Back alignment and domain information |
|---|
Score = 67.6 bits (165), Expect = 3e-13
Identities = 64/270 (23%), Positives = 103/270 (38%), Gaps = 32/270 (11%)
Query: 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC--DLK- 72
A+VTG K IG ++ L G V + + S C DL
Sbjct: 4 AVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSN 63
Query: 73 ---IRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
+ ++ E +++ F G+ ++L+NNA F P + + L
Sbjct: 64 SATLFSRCEAIIDACFRAF-GRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAEL 122
Query: 130 --SQLAHPLL-------KSAGNG------NIIFISSVAGVIAIPMC--SIYASSKVAMNQ 172
S P + AG N+ ++ + P+ ++Y +K A+
Sbjct: 123 FGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMYTMAKHALEG 182
Query: 173 LTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPM-LRPGEPNE 231
LT++ A E A +IRVN VAP + P D+ E + P+ R +
Sbjct: 183 LTRSAALELAPLQIRVNGVAPGLSLLP-------DAMPFEVQEDYRRKVPLGQREASAEQ 235
Query: 232 VSSVVAFLCLSATSYVTGQVICVDGGYSVT 261
++ VV FL Y+TG I VDGG S+T
Sbjct: 236 IADVVIFLVSPKAKYITGTCIKVDGGLSLT 265
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267 |
| >gnl|CDD|181020 PRK07533, PRK07533, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 67.3 bits (165), Expect = 3e-13
Identities = 49/199 (24%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKET-----TEFTEEDFSTVMTTNF 123
D++ Q E + ++ ++ G+L+ L+++ F PKE + + E F+ M +
Sbjct: 67 LDVREPGQLEAVFARIAEEW-GRLDFLLHSIA-FAPKEDLHGRVVDCSREGFALAMDVSC 124
Query: 124 ESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAK 183
S +++LA PL+ + G+ ++ +S + ++ K A+ + LA E
Sbjct: 125 HSFIRMARLAEPLMTNGGS--LLTMSYYGAEKVVENYNLMGPVKAALESSVRYLAAELGP 182
Query: 184 DKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243
IRV+ ++P ++T ++ LE A R P+ R + ++V +V AFL A
Sbjct: 183 KGIRVHAISPGPLKTRAASGIDDFDALLEDAAE---RAPLRRLVDIDDVGAVAAFLASDA 239
Query: 244 TSYVTGQVICVDGGYSVTG 262
+TG + +DGGY + G
Sbjct: 240 ARRLTGNTLYIDGGYHIVG 258
|
Length = 258 |
| >gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 67.0 bits (164), Expect = 5e-13
Identities = 69/271 (25%), Positives = 109/271 (40%), Gaps = 40/271 (14%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIV---------HTCSRNETELNQRIQEWKSKG 61
L G +VTG GIG A AA GA V + + + E + G
Sbjct: 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAG 63
Query: 62 LQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTT 121
+ + D+ L++ F G L++L+NNAG + +EE++ V+
Sbjct: 64 GEAVANGDDIADWDGAANLVDAAVETF-GGLDVLVNNAGILRDRMIANMSEEEWDAVIAV 122
Query: 122 N----FESAYHLSQLAHPLLKSAG---NGNIIFISSVAGVIAIPMCSIYASSKVAMNQLT 174
+ F + H + K AG + II SS AG+ Y+++K + LT
Sbjct: 123 HLKGHFATLRHAAAYWRAESK-AGRAVDARIINTSSGAGLQGSVGQGNYSAAKAGIAALT 181
Query: 175 KNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGE------ 228
A E + + VN +AP RT + +TV + M +P E
Sbjct: 182 LVAAAELGRYGVTVNAIAP-AARTRMTETVFAEM--------------MAKPEEGEFDAM 226
Query: 229 -PNEVSSVVAFLCLSATSYVTGQVICVDGGY 258
P VS +V +L + + VTG+V V+GG
Sbjct: 227 APENVSPLVVWLGSAESRDVTGKVFEVEGGK 257
|
Length = 286 |
| >gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 65.4 bits (160), Expect = 9e-13
Identities = 52/245 (21%), Positives = 96/245 (39%), Gaps = 33/245 (13%)
Query: 17 LVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQ 76
LV GG +G AVV+ + G V S + E + + V S Q
Sbjct: 5 LVYGGRGALGSAVVQAFKSRGWWV--ASIDLAENEE-----ADASIIVLDSDSFT---EQ 54
Query: 77 REKLMETVSSQFDGKLNILINNAGTFI---PKETTEFTEEDFSTVMTTNFESAYHLSQLA 133
++++ +V+ GK++ LI AG + K + +++ + N +++ S LA
Sbjct: 55 AKQVVASVARLS-GKVDALICVAGGWAGGSAKSKSFV--KNWDLMWKQNLWTSFIASHLA 111
Query: 134 HPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEW--AKDKIRVNTV 191
L S G ++ + A + P Y ++K A++QLT++LA E N +
Sbjct: 112 TKHLLS--GGLLVLTGAKAALEPTPGMIGYGAAKAAVHQLTQSLAAENSGLPAGSTANAI 169
Query: 192 APWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQV 251
P + TP D++F + ++ ++ F A +G +
Sbjct: 170 LPVTLDTPANRKAMPDADF----SSWT---------PLEFIAELILFWASGAARPKSGSL 216
Query: 252 ICVDG 256
I V
Sbjct: 217 IPVVT 221
|
Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221 |
| >gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases | Back alignment and domain information |
|---|
Score = 64.0 bits (157), Expect = 1e-12
Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 11/155 (7%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGA--IVHTCSRN---ETELNQRIQEWKSKGLQVSGSVC 69
T L+TGG G+G A+ LA GA +V SR+ + E ++ G +V+ C
Sbjct: 2 TYLITGGLGGLGRALARWLAERGARRLVLL-SRSGPDAPGAAALLAELEAAGARVTVVAC 60
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
D+ R ++ + + G L +I+ AG T E F+ V+ A++L
Sbjct: 61 DVADRDALAAVLAAIPAVE-GPLTGVIHAAGVLDDGVLASLTPERFAAVLAPKAAGAWNL 119
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYA 164
+L L + SS+AGV+ P + YA
Sbjct: 120 HELTADLPLDF----FVLFSSIAGVLGSPGQANYA 150
|
It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180 |
| >gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10 | Back alignment and domain information |
|---|
Score = 64.3 bits (157), Expect = 2e-12
Identities = 43/191 (22%), Positives = 74/191 (38%), Gaps = 3/191 (1%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQ-RIQEWKSKGLQVSGSVCDLKI 73
A V G G+G A+ AA G V +R E +L + + G D +
Sbjct: 1 VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGGSAKAVPTDARD 60
Query: 74 RAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLA 133
+ L + + + G L +L+ NAG + E T F V + ++ A
Sbjct: 61 EDEVIALFDLIEEEI-GPLEVLVYNAGANVWFPILETTPRVFEKVWEMAAFGGFLAAREA 119
Query: 134 HPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV-NTVA 192
+ + G G IIF + A + + +A +K A+ L +++A E I V + +
Sbjct: 120 AKRMLARGRGTIIFTGATASLRGRAGFAAFAGAKFALRALAQSMARELGPKGIHVAHVII 179
Query: 193 PWVIRTPLLDT 203
I T +
Sbjct: 180 DGGIDTDFIRE 190
|
This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238 |
| >gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 64.8 bits (158), Expect = 3e-12
Identities = 53/202 (26%), Positives = 88/202 (43%), Gaps = 18/202 (8%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR 74
L+TG + GIG A+ + A G V +R ++ + +Q+ D+
Sbjct: 3 VVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEA-LAAAGFTAVQL-----DVNDG 56
Query: 75 AQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAH 134
A +L E + ++ G L++LINNAG + E TN + +++
Sbjct: 57 AALARLAEELEAEH-GGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALF 115
Query: 135 PLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPW 194
PLL+ G ++ I SV+GV+ P Y +SK A++ L+ L E A ++V V P
Sbjct: 116 PLLRR-SRGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPG 174
Query: 195 VIRTPLLDTVEKDSNFLEHANR 216
I S F +A+R
Sbjct: 175 AIA----------SQFASNASR 186
|
Length = 274 |
| >gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 64.4 bits (157), Expect = 3e-12
Identities = 43/195 (22%), Positives = 88/195 (45%), Gaps = 9/195 (4%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAI---VHTCSRNETELNQRIQEWKSKGLQVSGS--VC 69
L+TG + GIG + LA+ + V+ R+ L ++ + W++ G G+
Sbjct: 2 VVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRD---LKKKGRLWEAAGALAGGTLETL 58
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
L + + + V + +++L+ NAG + +E+ ++V N +
Sbjct: 59 QLDVCDS-KSVAAAVERVTERHVDVLVCNAGVGLLGPLEALSEDAMASVFDVNVFGTVRM 117
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
Q P +K G+G I+ SSV G+ +P +Y +SK A+ L ++LA + + ++
Sbjct: 118 LQAFLPDMKRRGSGRILVTSSVGGLQGLPFNDVYCASKFALEGLCESLAVQLLPFNVHLS 177
Query: 190 TVAPWVIRTPLLDTV 204
+ + T ++ V
Sbjct: 178 LIECGPVHTAFMEKV 192
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258 |
| >gnl|CDD|181416 PRK08415, PRK08415, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 64.4 bits (157), Expect = 4e-12
Identities = 66/268 (24%), Positives = 118/268 (44%), Gaps = 33/268 (12%)
Query: 11 LKGMTALVTG--GTKGIGYAVVEELAAFGAIVHTCSRNETELNQRI----QEWKSKGLQV 64
+KG L+ G K I Y + + GA + NE L +R+ QE S +
Sbjct: 3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGSDYVYE 61
Query: 65 SGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTE-----FTEEDFSTVM 119
D+ + L E++ GK++ +++ + F PKE E ++E F+ M
Sbjct: 62 ----LDVSKPEHFKSLAESLKKDL-GKIDFIVH-SVAFAPKEALEGSFLETSKEAFNIAM 115
Query: 120 TTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLAC 179
+ S L++ PLL +++ +S + GV +P ++ +K A+ + LA
Sbjct: 116 EISVYSLIELTRALLPLLND--GASVLTLSYLGGVKYVPHYNVMGVAKAALESSVRYLAV 173
Query: 180 EWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLR-----TPMLRPGEPNEVSS 234
+ K IRVN ++ I+T + +F RM+L+ P+ + EV +
Sbjct: 174 DLGKKGIRVNAISAGPIKTLAASGI---GDF-----RMILKWNEINAPLKKNVSIEEVGN 225
Query: 235 VVAFLCLSATSYVTGQVICVDGGYSVTG 262
+L +S VTG++ VD GY++ G
Sbjct: 226 SGMYLLSDLSSGVTGEIHYVDAGYNIMG 253
|
Length = 274 |
| >gnl|CDD|169553 PRK08690, PRK08690, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 63.4 bits (154), Expect = 8e-12
Identities = 62/258 (24%), Positives = 115/258 (44%), Gaps = 15/258 (5%)
Query: 11 LKGMTALVTG--GTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSV 68
L+G L+TG + I Y + + GA + + +L +R+++ ++
Sbjct: 4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDSELVFR 62
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTE------FTEEDFSTVMTTN 122
CD+ + ++ + +DG L+ L+++ G F PKE + E F+T +
Sbjct: 63 CDVASDDEINQVFADLGKHWDG-LDGLVHSIG-FAPKEALSGDFLDSISREAFNTAHEIS 120
Query: 123 FESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWA 182
S L++ A P+++ N I+ +S + V AIP ++ +K ++ + A
Sbjct: 121 AYSLPALAKAARPMMRGR-NSAIVALSYLGAVRAIPNYNVMGMAKASLEAGIRFTAACLG 179
Query: 183 KDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS 242
K+ IR N ++ I+T + L H P+ R EV + AFL
Sbjct: 180 KEGIRCNGISAGPIKTLAASGIADFGKLLGHVAA---HNPLRRNVTIEEVGNTAAFLLSD 236
Query: 243 ATSYVTGQVICVDGGYSV 260
+S +TG++ VDGGYS+
Sbjct: 237 LSSGITGEITYVDGGYSI 254
|
Length = 261 |
| >gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 61.0 bits (148), Expect = 2e-11
Identities = 41/185 (22%), Positives = 71/185 (38%), Gaps = 14/185 (7%)
Query: 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRA 75
AL+ G T GIG A+ LA G + R+ L E + D+
Sbjct: 1 ALILGATGGIGRALARALAGRGWRLLLSGRDAGALAGLAAEVGALAR-----PADVAAEL 55
Query: 76 QREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHP 135
+ L + G L++L+ AG + K + ++ N A + L H
Sbjct: 56 EVWALAQE-----LGPLDLLVYAAGAILGKPLARTKPAAWRRILDANLTGAALV--LKHA 108
Query: 136 LLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWV 195
L A ++F+ + ++ +P S YA++K A+ + E +R+ V P
Sbjct: 109 LALLAAGARLVFLGAYPELVMLPGLSAYAAAKAALEAYVEVARKEV--RGLRLTLVRPPA 166
Query: 196 IRTPL 200
+ T L
Sbjct: 167 VDTGL 171
|
Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206 |
| >gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 61.6 bits (150), Expect = 2e-11
Identities = 48/193 (24%), Positives = 84/193 (43%), Gaps = 27/193 (13%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQ----VSGSVCD 70
TAL+ G ++G+G +V+ L G V R + LQ V D
Sbjct: 3 TALIIGASRGLGLGLVDRLLERGWQVTATVRGPQ---------QDTALQALPGVHIEKLD 53
Query: 71 LKIRAQREKLMETVSSQ-FDGKLNILINNAGTFIP--KETTEFTEEDFSTVMTTNFESAY 127
+ A ++L++ + Q FD +L NAG P + + T + + TN +
Sbjct: 54 MNDPASLDQLLQRLQGQRFD----LLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPI 109
Query: 128 HLSQLAHPLLKSAGNGNIIFISSVAGVIAIP----MCSIYASSKVAMNQLTKNLACEWAK 183
L++ + G G + F+SS G + +P M +Y +SK A+N +T++ E +
Sbjct: 110 RLARRLLGQV-RPGQGVLAFMSSQLGSVELPDGGEMP-LYKASKAALNSMTRSFVAELGE 167
Query: 184 DKIRVNTVAP-WV 195
+ V ++ P WV
Sbjct: 168 PTLTVLSMHPGWV 180
|
Length = 225 |
| >gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 62.3 bits (152), Expect = 3e-11
Identities = 53/217 (24%), Positives = 82/217 (37%), Gaps = 14/217 (6%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE--WKSKGLQVSGS 67
SL G +VTG +GIG + L A GA + E EL E + L V
Sbjct: 6 SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVAD 65
Query: 68 VCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAY 127
V D A + E +F G +++++ NAG + + F V+ N +
Sbjct: 66 VTD---LAAMQAAAEEAVERF-GGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVF 121
Query: 128 HLSQLAHPLLKS--AGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDK 185
H L + G ++ +SS+A A P + Y +SK + L E A
Sbjct: 122 H---TVRATLPALIERRGYVLQVSSLAAFAAAPGMAAYCASKAGVEAFANALRLEVAHHG 178
Query: 186 IRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTP 222
+ V + I T L+ + D L + R P
Sbjct: 179 VTVGSAYLSWIDTDLVRDADAD---LPAFRELRARLP 212
|
Length = 296 |
| >gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 61.8 bits (151), Expect = 3e-11
Identities = 54/210 (25%), Positives = 82/210 (39%), Gaps = 44/210 (20%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-----------------IVHTCSRNETELNQ 52
SL G T +TG ++GIG A+ A GA +HT +
Sbjct: 3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEE------ 56
Query: 53 RIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTE 112
I+ + L + V D++ Q + +F G ++I +NNA I TE T
Sbjct: 57 -IEAAGGQALPL---VGDVRDEDQVAAAVAKAVERF-GGIDICVNNASA-INLTGTEDTP 110
Query: 113 -EDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISS--------VAGVIAIPMCSIY 163
+ F + N + +SQ P LK + N +I+ +S A A Y
Sbjct: 111 MKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAPHTA------Y 164
Query: 164 ASSKVAMNQLTKNLACEWAKDKIRVNTVAP 193
+K M+ T LA E+ D I VN + P
Sbjct: 165 TMAKYGMSLCTLGLAEEFRDDGIAVNALWP 194
|
Length = 273 |
| >gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 61.7 bits (150), Expect = 3e-11
Identities = 58/207 (28%), Positives = 84/207 (40%), Gaps = 27/207 (13%)
Query: 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL--QVSGSVCD 70
G T ++TG GIG ELA GA V R+ + + E + L +V D
Sbjct: 1 GKTVIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRHLD 60
Query: 71 L----KIRAQREKLMETVSSQFDGKLNILINNAGTFI-PKETTEFTEEDFSTVMTTNFES 125
L IRA + + + +L++LINNAG P TE+ F N
Sbjct: 61 LASLKSIRAFAAEFLAE-----EDRLDVLINNAGVMRCPYSK---TEDGFEMQFGVNHLG 112
Query: 126 AYHLSQLAHPLLKSAGNGNIIFISSVAGVIA-IPMCSI-----------YASSKVAMNQL 173
+ L+ L LLK + I+ +SS+A I + Y SK+A
Sbjct: 113 HFLLTNLLLDLLKKSAPSRIVNVSSLAHKAGKINFDDLNSEKSYNTGFAYCQSKLANVLF 172
Query: 174 TKNLACEWAKDKIRVNTVAPWVIRTPL 200
T+ LA + VN + P V+RT L
Sbjct: 173 TRELARRLQGTGVTVNALHPGVVRTEL 199
|
Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274 |
| >gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 61.1 bits (149), Expect = 4e-11
Identities = 57/203 (28%), Positives = 90/203 (44%), Gaps = 33/203 (16%)
Query: 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGS------ 67
+ +TG + GIG A+ E A GA + +R L Q + ++ L +
Sbjct: 3 LKVFITGASSGIGQALAREYARQGATLGLVARRTDAL----QAFAAR-LPKAARVSVYAA 57
Query: 68 -VCDLK-IRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEED---FSTVMTTN 122
V D + A + G +++I NAG + T E ED F VM TN
Sbjct: 58 DVRDADALAAAAADFIAAH-----GLPDVVIANAGISVGTLTEE--REDLAVFREVMDTN 110
Query: 123 FESAYHLSQLA--HPLL---KSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNL 177
+ +A P + ++A G ++ I+SVAGV +P Y++SK A + ++L
Sbjct: 111 Y-----FGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAIKYLESL 165
Query: 178 ACEWAKDKIRVNTVAPWVIRTPL 200
E +RV T+AP IRTP+
Sbjct: 166 RVELRPAGVRVVTIAPGYIRTPM 188
|
Length = 257 |
| >gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Score = 61.4 bits (149), Expect = 5e-11
Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 11/196 (5%)
Query: 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGSVCD 70
G ALVTG T GIG +LA G + +RN +L +SK Q+ V D
Sbjct: 53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVD 112
Query: 71 LK--IRAQREKLMETVSSQFDGKLNILINNAGTFIP--KETTEFTEEDFSTVMTTNFESA 126
I +++ ET+ + +LINN G P + E EE ++ N E
Sbjct: 113 FSGDIDEGVKRIKETIEGL---DVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGT 169
Query: 127 YHLSQLAHPLLKSAGNGNIIFISSVAGVI--AIPMCSIYASSKVAMNQLTKNLACEWAKD 184
++Q P + G II I S A ++ + P+ ++YA++K ++Q ++ L E+ K
Sbjct: 170 TKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKS 229
Query: 185 KIRVNTVAPWVIRTPL 200
I V P + T +
Sbjct: 230 GIDVQCQVPLYVATKM 245
|
Length = 320 |
| >gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 60.4 bits (147), Expect = 2e-10
Identities = 47/192 (24%), Positives = 80/192 (41%), Gaps = 2/192 (1%)
Query: 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLK 72
G +VTG GIG A GA V +E + + ++ G D+
Sbjct: 315 GKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVS 374
Query: 73 IRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQL 132
E E V ++ G +I++NNAG + + + ED+ V+ N H +L
Sbjct: 375 DADAMEAFAEWVRAEH-GVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRL 433
Query: 133 -AHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTV 191
+++ G+I+ ++S A YA+SK A+ L++ L E A I V +
Sbjct: 434 FGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSECLRAELAAAGIGVTAI 493
Query: 192 APWVIRTPLLDT 203
P + T ++ T
Sbjct: 494 CPGFVDTNIVAT 505
|
Length = 582 |
| >gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase | Back alignment and domain information |
|---|
Score = 59.2 bits (143), Expect = 2e-10
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 18/209 (8%)
Query: 16 ALVTGGTKGIGYAVVEELAAF----GAIVHTCSRNETELNQRIQEWKSK--GLQVSGSVC 69
LVTG ++G G + +ELA G+++ +RN+ L Q E ++ GL+V
Sbjct: 3 CLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSL 62
Query: 70 DLKIRAQREKLMETVSSQFDGKLN-----ILINNAGTF--IPKETTEFTEEDF-STVMTT 121
DL A E+L++ + + +LINNAGT + K + ++
Sbjct: 63 DLGAEAGLEQLLKALRE--LPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWAL 120
Query: 122 NFESAYHLSQLAHPLLKSAGNGN--IIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLAC 179
N S L+ K + N ++ ISS+ + ++Y + K A + L + LA
Sbjct: 121 NLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGWALYCAGKAARDMLFQVLAL 180
Query: 180 EWAKDKIRVNTVAPWVIRTPLLDTVEKDS 208
E +RV AP V+ T + V ++S
Sbjct: 181 EEKNPNVRVLNYAPGVLDTDMQQQVREES 209
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256 |
| >gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs | Back alignment and domain information |
|---|
Score = 59.7 bits (145), Expect = 3e-10
Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 19/165 (11%)
Query: 17 LVTGGTKGIGYAVVEELA-AFGAIVHTCSR-----NETELNQRIQEWKSKGLQVSGSVCD 70
LVTGG GIG A+ LA +GA + R E Q + ++ G +V D
Sbjct: 209 LVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARVLYISAD 268
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGT----FIPKETTEFTEEDFSTVMTTNFESA 126
+ A +L+E V ++ G ++ +I+ AG + ++ T EDF V+ +
Sbjct: 269 VTDAAAVRRLLEKVRERY-GAIDGVIHAAGVLRDALLAQK----TAEDFEAVLAPKVDGL 323
Query: 127 YHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMN 171
+L+Q L + SSV+ + YA++ ++
Sbjct: 324 LNLAQ----ALADEPLDFFVLFSSVSAFFGGAGQADYAAANAFLD 364
|
Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436 |
| >gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 59.0 bits (143), Expect = 3e-10
Identities = 56/198 (28%), Positives = 89/198 (44%), Gaps = 16/198 (8%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
L G ++TG + GIG A E A GA + +R+E L +E ++ G +V
Sbjct: 4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPT 63
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNA-----GTF--IPKETTEFTEEDFSTVMTTN 122
D+ A + K + T ++ F G++++ +NN G F P E E V+ TN
Sbjct: 64 DVT-DADQVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHE-------QVIQTN 115
Query: 123 FESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWA 182
+ A P+ K G+G I + S+ G A P + Y++SK + ++ L E A
Sbjct: 116 LIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLRGFSEALRGELA 175
Query: 183 KD-KIRVNTVAPWVIRTP 199
I V V P + TP
Sbjct: 176 DHPDIHVCDVYPAFMDTP 193
|
Length = 330 |
| >gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 58.1 bits (141), Expect = 5e-10
Identities = 66/283 (23%), Positives = 106/283 (37%), Gaps = 67/283 (23%)
Query: 17 LVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQ 76
+V G GIG A+ + A G V NE L + + G VS D+ R
Sbjct: 5 VVVIGAGGIGQAIARRVGA-GKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRES 63
Query: 77 REKLMETVSSQFDGKLNILINNAG---TFIPKET--------TEFTEEDFSTVMTTNFES 125
+ L T +Q G + L++ AG + E T E+F V+
Sbjct: 64 VKALAAT--AQTLGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIA----- 116
Query: 126 AYHLSQLAHPLLKSAGNGNIIFISSVAG---------------------VIAIPMCSI-- 162
G G + I+S +G ++++P
Sbjct: 117 -------------PGGAG--VVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDA 161
Query: 163 -------YASSKVAMNQL-TKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHA 214
Y +K A N L A +W + R+N+++P +I TPL E + +
Sbjct: 162 IEDSLHAYQIAKRA-NALRVMAEAVKWGERGARINSISPGIISTPLAQD-ELNGPRGDGY 219
Query: 215 NRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGG 257
M ++P RPG P+E++++ FL S++TG VDGG
Sbjct: 220 RNMFAKSPAGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGG 262
|
Length = 275 |
| >gnl|CDD|236308 PRK08594, PRK08594, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 58.2 bits (141), Expect = 5e-10
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 8/141 (5%)
Query: 125 SAYHLSQLAH---PLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEW 181
SAY L+ +A L+ G+ I+ ++ + G + ++ +K ++ K LA +
Sbjct: 122 SAYSLTAVAREAKKLMTEGGS--IVTLTYLGGERVVQNYNVMGVAKASLEASVKYLANDL 179
Query: 182 AKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCL 241
KD IRVN ++ IRT V F + R P+ R EV AFL
Sbjct: 180 GKDGIRVNAISAGPIRTLSAKGV---GGFNSILKEIEERAPLRRTTTQEEVGDTAAFLFS 236
Query: 242 SATSYVTGQVICVDGGYSVTG 262
+ VTG+ I VD GY + G
Sbjct: 237 DLSRGVTGENIHVDSGYHIIG 257
|
Length = 257 |
| >gnl|CDD|219957 pfam08659, KR, KR domain | Back alignment and domain information |
|---|
Score = 56.0 bits (136), Expect = 1e-09
Identities = 44/157 (28%), Positives = 69/157 (43%), Gaps = 15/157 (9%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNET---ELNQRIQEWKSKGLQVSGSVC 69
T LVTGG G+G + LA GA +V SR+ E + E +++G +V+ C
Sbjct: 2 TYLVTGGLGGLGLELARWLAERGARHLV-LLSRSGAPDPEAEALLAELEARGAEVTVVAC 60
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
D+ R L+ + + L +I+ AG T EDF+ V+ A++L
Sbjct: 61 DVSDRDAVRALLAEIRADG-PPLRGVIHAAGVLRDALLANMTAEDFARVLAPKVTGAWNL 119
Query: 130 SQL--AHPLLKSAGNGNIIFISSVAGVIAIPMCSIYA 164
+ PL + SS+AGV+ P + YA
Sbjct: 120 HEATRDRPL------DFFVLFSSIAGVLGSPGQANYA 150
|
This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181 |
| >gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 55.9 bits (135), Expect = 2e-09
Identities = 46/194 (23%), Positives = 85/194 (43%), Gaps = 14/194 (7%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRI--------QEWKSKGL 62
L G T +TG ++GIG A+ + A GA V ++ E + ++ +E ++ G
Sbjct: 1 LAGKTLFITGASRGIGKAIALKAARDGANVVIAAKT-AEPHPKLPGTIYTAAEEIEAAGG 59
Query: 63 QVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTN 122
+ + D++ Q +E +F G ++IL+NNA T + + + +M N
Sbjct: 60 KALPCIVDIRDEDQVRAAVEKAVEKFGG-IDILVNNASAISLTGTLDTPMKRYDLMMGVN 118
Query: 123 FESAYHLSQLAHPLLKSAGNGNIIFIS---SVAGVIAIPMCSIYASSKVAMNQLTKNLAC 179
Y S+ P LK + N +I+ +S ++ + Y +K M+ +A
Sbjct: 119 TRGTYLCSKACLPYLKKSKNPHILNLSPPLNLNPKWFKNHTA-YTMAKYGMSMCVLGMAE 177
Query: 180 EWAKDKIRVNTVAP 193
E+ I VN + P
Sbjct: 178 EFKPGGIAVNALWP 191
|
This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243 |
| >gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs | Back alignment and domain information |
|---|
Score = 56.1 bits (135), Expect = 3e-09
Identities = 43/144 (29%), Positives = 66/144 (45%), Gaps = 13/144 (9%)
Query: 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGS----- 67
G + L+TG GIG A +A G VH RN+T R +E + + SG+
Sbjct: 1 GRSFLITGANSGIGKAAALAIAKRGGTVHMVCRNQT----RAEEARKEIETESGNQNIFL 56
Query: 68 -VCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESA 126
+ D+ Q + +E + KL++LINNAG + K E TE+ TN
Sbjct: 57 HIVDMSDPKQVWEFVEEFKEEGK-KLHVLINNAGCMVNKR--ELTEDGLEKNFATNTLGT 113
Query: 127 YHLSQLAHPLLKSAGNGNIIFISS 150
Y L+ P+L+ + +I +SS
Sbjct: 114 YILTTHLIPVLEKEEDPRVITVSS 137
|
Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255 |
| >gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 55.0 bits (133), Expect = 5e-09
Identities = 53/193 (27%), Positives = 81/193 (41%), Gaps = 15/193 (7%)
Query: 15 TALVTGGTKGIGYAVVEELAAFG----AIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
T L+TG G G V LA G A V + T L E +GL + D
Sbjct: 4 TILITGAGSGFGREVALRLARKGHNVIAGVQIAPQ-VTALRA---EAARRGLALRVEKLD 59
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
L R + ++++D +++L+NNAG + E + TN L+
Sbjct: 60 LTDAIDRAQ-----AAEWD--VDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELT 112
Query: 131 QLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNT 190
Q + + G G ++F SS+AG+I P Y +SK A+ + + + E I+V T
Sbjct: 113 QGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMHAELKPFGIQVAT 172
Query: 191 VAPWVIRTPLLDT 203
V P T DT
Sbjct: 173 VNPGPYLTGFNDT 185
|
Length = 257 |
| >gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Score = 54.8 bits (132), Expect = 7e-09
Identities = 47/182 (25%), Positives = 89/182 (48%), Gaps = 7/182 (3%)
Query: 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGSVCDLK 72
M LVTG T G G + G V R + +R+QE K + G + + D++
Sbjct: 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQ----ERLQELKDELGDNLYIAQLDVR 56
Query: 73 IRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTE-EDFSTVMTTNFESAYHLSQ 131
RA E+++ ++ +++ +++L+NNAG + E ED+ T++ TN + ++++
Sbjct: 57 NRAAIEEMLASLPAEWR-NIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTR 115
Query: 132 LAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTV 191
P + +G+II I S AG ++Y ++K + Q + NL + +RV +
Sbjct: 116 AVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDI 175
Query: 192 AP 193
P
Sbjct: 176 EP 177
|
Length = 248 |
| >gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 54.5 bits (132), Expect = 8e-09
Identities = 47/186 (25%), Positives = 81/186 (43%), Gaps = 8/186 (4%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR 74
T L+TG + G G A+ + A G V R+E + L + D+
Sbjct: 6 TWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRAL---ARLLDVTDF 62
Query: 75 AQREKLMETVSSQFDGKLNILINNAGTFIPKETT--EFTEEDFSTVMTTNFESAYHLSQL 132
+ ++ + F G +++L+NNAG E E + N A +++
Sbjct: 63 DAIDAVVADAEATF-GPIDVLVNNAG--YGHEGAIEESPLAEMRRQFEVNVFGAVAMTKA 119
Query: 133 AHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVA 192
P +++ G+I+ I+S+ G+I +P Y SK A+ ++++LA E A I V V
Sbjct: 120 VLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGISESLAKEVAPFGIHVTAVE 179
Query: 193 PWVIRT 198
P RT
Sbjct: 180 PGSFRT 185
|
Length = 277 |
| >gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 54.1 bits (130), Expect = 9e-09
Identities = 46/188 (24%), Positives = 75/188 (39%), Gaps = 10/188 (5%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR 74
L+TG T GIG + + A G V C RN++ L++ + S ++ L
Sbjct: 3 AVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ--------SANIFTLAFD 54
Query: 75 AQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAH 134
+ SQ + I NAG + + + V N + +
Sbjct: 55 VTDHPGTKAALSQLPFIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQ 114
Query: 135 PLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPW 194
P L S G+ ++ + S+A +A+P Y +SK A+ + L + I V TV P
Sbjct: 115 PHL-SCGH-RVVIVGSIASELALPRAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPG 172
Query: 195 VIRTPLLD 202
+ TPL D
Sbjct: 173 FVATPLTD 180
|
Length = 240 |
| >gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 53.2 bits (128), Expect = 2e-08
Identities = 42/142 (29%), Positives = 71/142 (50%), Gaps = 10/142 (7%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRI-QEWKSKGLQVSGSV 68
L G TALVTG ++GIG + LA GA V R + ++ E ++ G + S
Sbjct: 3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVG 62
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYH 128
DL LM+T +F G L+ L+ NA + E+ +ED++ M N ++ +
Sbjct: 63 ADLTDEESVAALMDTAREEF-GGLDALVLNASGGM--ESG--MDEDYA--MRLNRDAQRN 115
Query: 129 LSQLAHPLLKSAGNGNIIFISS 150
L++ A PL+ + ++F++S
Sbjct: 116 LARAALPLMPAG--SRVVFVTS 135
|
Length = 248 |
| >gnl|CDD|235694 PRK06079, PRK06079, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 3e-08
Identities = 63/271 (23%), Positives = 112/271 (41%), Gaps = 37/271 (13%)
Query: 1 MSDFREQRWSLKGMTALVTG--GTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWK 58
MS L G +V G + I + + + GA V T N R++ K
Sbjct: 1 MSGI------LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIY-----TYQNDRMK--K 47
Query: 59 SKGLQVSGSV----CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKET-----TE 109
S V CD+ E+ T+ + GK++ +++ A + KE T+
Sbjct: 48 SLQKLVDEEDLLVECDVASDESIERAFATIKERV-GKIDGIVH-AIAYAKKEELGGNVTD 105
Query: 110 FTEEDFSTVMTTNFESAYHL---SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASS 166
+ + ++ SAY L ++ A PLL +I+ ++ AIP ++ +
Sbjct: 106 TSRDGYALAQDI---SAYSLIAVAKYARPLLNP--GASIVTLTYFGSERAIPNYNVMGIA 160
Query: 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRP 226
K A+ + LA + K IRVN ++ ++T + ++ + L+ ++ RT
Sbjct: 161 KAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDS---RTVDGVG 217
Query: 227 GEPNEVSSVVAFLCLSATSYVTGQVICVDGG 257
EV + AFL ++ VTG +I VD G
Sbjct: 218 VTIEEVGNTAAFLLSDLSTGVTGDIIYVDKG 248
|
Length = 252 |
| >gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 52.0 bits (125), Expect = 6e-08
Identities = 47/197 (23%), Positives = 73/197 (37%), Gaps = 32/197 (16%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC---DL 71
+ L+TG + GIG L + G V R E ++ L+ G D
Sbjct: 6 SILITGCSSGIGAYCARALQSDGWRVFATCRKEEDV---------AALEAEGLEAFQLDY 56
Query: 72 KIRAQREKLMETVSSQFDGKLNILINN-----AGTFIPKETTEFTEEDFSTV-----MTT 121
L+ V G+L+ L NN G ED T
Sbjct: 57 AEPESIAALVAQVLELSGGRLDALFNNGAYGQPGAV----------EDLPTEALRAQFEA 106
Query: 122 NFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEW 181
NF + L++ P+++ G G I+ SS+ G++ + Y +SK A+ L+ L E
Sbjct: 107 NFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEGLSLTLRMEL 166
Query: 182 AKDKIRVNTVAPWVIRT 198
I V+ + P I T
Sbjct: 167 QGSGIHVSLIEPGPIET 183
|
Length = 277 |
| >gnl|CDD|181187 PRK07984, PRK07984, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 51.8 bits (124), Expect = 7e-08
Identities = 59/264 (22%), Positives = 116/264 (43%), Gaps = 28/264 (10%)
Query: 11 LKGMTALVTG--GTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSV 68
L G LVTG I Y + + + GA + +N+ +L R++E+ + Q+ +
Sbjct: 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAA---QLGSDI 59
Query: 69 ---CDLKIRAQREKL---METVSSQFDGKLNILINNAGTFIPKETTE------FTEEDFS 116
CD+ A + + + V +FDG +++ G F P + + T E F
Sbjct: 60 VLPCDVAEDASIDAMFAELGKVWPKFDG----FVHSIG-FAPGDQLDGDYVNAVTREGFK 114
Query: 117 TVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKN 176
+ S +++ +L ++ +S + AIP ++ +K ++ +
Sbjct: 115 IAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVMGLAKASLEANVRY 172
Query: 177 LACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVV 236
+A + +RVN ++ IRT ++ L H + TP+ R +V +
Sbjct: 173 MANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAV---TPIRRTVTIEDVGNSA 229
Query: 237 AFLCLSATSYVTGQVICVDGGYSV 260
AFLC ++ ++G+V+ VDGG+S+
Sbjct: 230 AFLCSDLSAGISGEVVHVDGGFSI 253
|
Length = 262 |
| >gnl|CDD|180838 PRK07102, PRK07102, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 51.5 bits (124), Expect = 7e-08
Identities = 49/189 (25%), Positives = 78/189 (41%), Gaps = 5/189 (2%)
Query: 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQ-VSGSVCDL 71
L+ G T I A AA GA ++ +R+ L + + +++G VS D+
Sbjct: 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDI 60
Query: 72 KIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQ 131
A ++++ + D I++ GT + E TNFE L
Sbjct: 61 LDTASHAAFLDSLPALPD----IVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLT 116
Query: 132 LAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTV 191
L ++ G+G I+ ISSVAG +Y S+K A+ L K + V TV
Sbjct: 117 LLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTV 176
Query: 192 APWVIRTPL 200
P +RTP+
Sbjct: 177 KPGFVRTPM 185
|
Length = 243 |
| >gnl|CDD|180774 PRK06953, PRK06953, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 51.2 bits (123), Expect = 7e-08
Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 17/173 (9%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR 74
T L+ G ++GIG V + A G V +R+ L +Q ++ L + D+
Sbjct: 3 TVLIVGASRGIGREFVRQYRADGWRVIATARDAAAL-AALQALGAEALAL-----DVADP 56
Query: 75 AQREKLMETVSSQFDG-KLNILINNAGTFIPKE--TTEFTEEDFSTVMTTNFESAYHLSQ 131
A L + + DG L+ + AG + P+ T EDF VM TN L
Sbjct: 57 ASVAGL----AWKLDGEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLP 112
Query: 132 LAHPLLKSAGNGNIIFISSVAGVIAIPMCS---IYASSKVAMNQLTKNLACEW 181
+ PL+++AG G + +SS G I + +Y +SK A+N + + +
Sbjct: 113 ILLPLVEAAG-GVLAVLSSRMGSIGDATGTTGWLYRASKAALNDALRAASLQA 164
|
Length = 222 |
| >gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 51.7 bits (124), Expect = 1e-07
Identities = 50/192 (26%), Positives = 81/192 (42%), Gaps = 20/192 (10%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLK-- 72
T +TG + G G + E L A G V R L+ + G ++ D+
Sbjct: 4 TWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY---GDRLWVLQLDVTDS 60
Query: 73 --IRAQREKLMETVSSQFD--GKLNILINNAG--TFIPKETTEFTEEDFSTVMTTNFESA 126
+RA V F G+++++++NAG F E E ++ + TN +
Sbjct: 61 AAVRA-------VVDRAFAALGRIDVVVSNAGYGLFGAAE--ELSDAQIRRQIDTNLIGS 111
Query: 127 YHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKI 186
+ + A P L+ G G I+ +SS G IA P S+Y ++K + + +A E A I
Sbjct: 112 IQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFVEAVAQEVAPFGI 171
Query: 187 RVNTVAPWVIRT 198
V P RT
Sbjct: 172 EFTIVEPGPART 183
|
Length = 276 |
| >gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 50.8 bits (122), Expect = 1e-07
Identities = 47/199 (23%), Positives = 81/199 (40%), Gaps = 30/199 (15%)
Query: 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN-ETELNQRIQEWKSKGLQVSGSVCDLK 72
+ A+VTG ++G+G A+ E+L G V +R+ L G +++ DL
Sbjct: 2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAA------AGERLAEVELDLS 55
Query: 73 IRAQREKLMETVSSQF---DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
A + +LINNAGT P + A +
Sbjct: 56 DAAAAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAA---------AIARAV 106
Query: 130 S-QLAHPLLKS-----AGNGN----IIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLAC 179
+A PL+ + A + I+ ISS A A S+Y ++K A++ + +A
Sbjct: 107 GLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKAALDHHARAVAL 166
Query: 180 EWAKDKIRVNTVAPWVIRT 198
+ A +R+ ++AP V+ T
Sbjct: 167 D-ANRALRIVSLAPGVVDT 184
|
Length = 243 |
| >gnl|CDD|180789 PRK06997, PRK06997, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 2e-07
Identities = 62/270 (22%), Positives = 108/270 (40%), Gaps = 36/270 (13%)
Query: 11 LKGMTALVTG--GTKGIGYAVVEELAAFGAIVHTCSRNETEL-----NQRIQEWKSKGLQ 63
L G L+TG + I Y I C R EL R ++ ++
Sbjct: 4 LAGKRILITGLLSNRSIAYG----------IAKACKREGAELAFTYVGDRFKDRITEFAA 53
Query: 64 VSGS----VCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVM 119
GS CD+ Q + L ++ +DG L+ L+++ G F P+E DF +
Sbjct: 54 EFGSDLVFPCDVASDEQIDALFASLGQHWDG-LDGLVHSIG-FAPREAIA---GDFLDGL 108
Query: 120 T-TNFESAYHLSQLAHPLLKSAG------NGNIIFISSVAGVIAIPMCSIYASSKVAMNQ 172
+ NF A+ +S + P L A + +++ +S + +P + +K ++
Sbjct: 109 SRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVVPNYNTMGLAKASLEA 168
Query: 173 LTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEV 232
+ LA IR N ++ I+T ++ L+ + P+ R EV
Sbjct: 169 SVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDF---VESNAPLRRNVTIEEV 225
Query: 233 SSVVAFLCLSATSYVTGQVICVDGGYSVTG 262
+V AFL S VTG++ VD G++
Sbjct: 226 GNVAAFLLSDLASGVTGEITHVDSGFNAVV 255
|
Length = 260 |
| >gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs | Back alignment and domain information |
|---|
Score = 50.8 bits (122), Expect = 2e-07
Identities = 39/142 (27%), Positives = 57/142 (40%), Gaps = 9/142 (6%)
Query: 17 LVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQ-RIQEWKSKGLQVSGSVCDLKI 73
L+TGG G+G V LAA GA +V R R ++ G +VS CD+
Sbjct: 154 LITGGLGGLGLLVARWLAARGARHLVLLSRRGPAPRAAARAALLRAGGARVSVVRCDVTD 213
Query: 74 RAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLA 133
A L+ + G L +I+ AG E T F+ V+ A +L +L
Sbjct: 214 PAALAALLAEL--AAGGPLAGVIHAAGVLRDALLAELTPAAFAAVLAAKVAGALNLHELT 271
Query: 134 HPLLKSAGNGNIIFISSVAGVI 155
L + SSVA ++
Sbjct: 272 PDLPLDF----FVLFSSVAALL 289
|
Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375 |
| >gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR) | Back alignment and domain information |
|---|
Score = 49.4 bits (118), Expect = 2e-07
Identities = 35/160 (21%), Positives = 59/160 (36%), Gaps = 9/160 (5%)
Query: 91 KLNILINNAGTFIPKETTE--FTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFI 148
+ +++++NA I + T + N L + A L+K+ G I I
Sbjct: 31 RRDVVVHNAA--ILDDGRLIDLTGSRIERAIRANVVGTRRLLEAARELMKAKRLGRFILI 88
Query: 149 SSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDS 208
SSVAG+ P YA+SK A++ L + A E + + VA +
Sbjct: 89 SSVAGLFGAPGLGGYAASKAALDGLAQQWASEGWGNGLPATAVACGTWAGSGMAKGPVAP 148
Query: 209 NFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248
+ R +RT P EV+ + + V
Sbjct: 149 EEILGNRRHGVRT-----MPPEEVARALLNALDRPKAGVC 183
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186 |
| >gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 49.5 bits (119), Expect = 3e-07
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 30/198 (15%)
Query: 17 LVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGSVCDLKIR 74
L+TG + G+G + E AA G + C+R L + E ++ G++V+ + D+
Sbjct: 6 LITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDH 65
Query: 75 AQREKLMETVSSQFDGKLNILINNAGT-----------FIPKETTEFTEEDFSTVMTTNF 123
Q ++ + G L+ +I NAG + K T E TNF
Sbjct: 66 DQVFEVFAEFRDEL-GGLDRVIVNAGIGKGARLGTGKFWANKATAE-----------TNF 113
Query: 124 ESAYHLSQL--AHPLLKSAGNGNIIFISSVAGVIAIP-MCSIYASSKVAMNQLTKNLACE 180
+A L+Q A + + G+G+++ ISSV+ V +P + + YA+SK + L + L E
Sbjct: 114 VAA--LAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKAGVASLGEGLRAE 171
Query: 181 WAKDKIRVNTVAPWVIRT 198
AK I+V+T+ P IR+
Sbjct: 172 LAKTPIKVSTIEPGYIRS 189
|
Length = 248 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 49.9 bits (119), Expect = 4e-07
Identities = 55/271 (20%), Positives = 84/271 (30%), Gaps = 50/271 (18%)
Query: 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKI 73
M LVTGG IG +VE L A G V R L+ + S V + D
Sbjct: 1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL----SGVEFVVLDLTDR-- 54
Query: 74 RAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLA 133
+ V G + +I+ A ++ +F + N + +L + A
Sbjct: 55 --------DLVDELAKGVPDAVIHLAAQSSVPDSNASDPAEF---LDVNVDGTLNLLEAA 103
Query: 134 HPLLKSAGNGNIIFISSVAGVIAIPMC-------------SIYASSKVAMNQLTKNLACE 180
++AG +F SSV+ V P + Y SK+A QL
Sbjct: 104 ----RAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQL-----LR 154
Query: 181 WAKDKIRVNTVA---PWVI---RTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNE--- 231
+ V V P L + S F+ + + G
Sbjct: 155 AYARLYGLPVVILRPFNVYGPGDKPDLSSGVV-SAFIRQLLKGEPIIVIGGDGSQTRDFV 213
Query: 232 -VSSVVAFLCLSATSYVTGQVICVDGGYSVT 261
V V L L+ + G G +T
Sbjct: 214 YVDDVADALLLALENPDGGVFNIGSGTAEIT 244
|
Length = 314 |
| >gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 49.3 bits (118), Expect = 6e-07
Identities = 46/148 (31%), Positives = 68/148 (45%), Gaps = 13/148 (8%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGSV 68
L G A+VTG + G+G + LAA GA V RN + + ++ ++S
Sbjct: 12 LSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRA 71
Query: 69 CDLKIRAQREKLMETVSSQFDGK-LNILINNAGTFIPKE---TTEFTEEDFSTVMTTNFE 124
DL A L E + + +G+ +++LINNAG P E T + E F T +F
Sbjct: 72 LDLSSLASVAALGEQLRA--EGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFA 129
Query: 125 SAYHLSQLAHPLLKSAGNGNIIFISSVA 152
HL PLL+ AG + SS+A
Sbjct: 130 LTAHLL----PLLR-AGRARVTSQSSIA 152
|
Length = 313 |
| >gnl|CDD|235776 PRK06300, PRK06300, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 6e-07
Identities = 58/198 (29%), Positives = 93/198 (46%), Gaps = 32/198 (16%)
Query: 80 LMETVSSQFDGKLNILINNA--GTFIPKETTEFTEEDFSTVMTTNFESAYHL-SQLAH-- 134
+ E V F G ++IL+++ I K E + + + ++T S+Y S L+H
Sbjct: 109 VAEQVKKDF-GHIDILVHSLANSPEISKPLLETSRKGYLAALST---SSYSFVSLLSHFG 164
Query: 135 PLLKSAGNGNIIFISSVAGVIAIP-----MCSIYASSKVAMNQLTKNLACEWAKD-KIRV 188
P++ G+ I ++ +A + A+P M +S+K A+ TK LA E + IRV
Sbjct: 165 PIMNPGGS--TISLTYLASMRAVPGYGGGM----SSAKAALESDTKVLAWEAGRRWGIRV 218
Query: 189 NTVAPWVIRTPLLDTVEKDSNFLEHANRMV----LRTPMLRPGEPNEVSSVVAFLCLSAT 244
NT++ PL K F+E RMV P+ P E +V + AFL
Sbjct: 219 NTISA----GPLASRAGKAIGFIE---RMVDYYQDWAPLPEPMEAEQVGAAAAFLVSPLA 271
Query: 245 SYVTGQVICVDGGYSVTG 262
S +TG+ + VD G +V G
Sbjct: 272 SAITGETLYVDHGANVMG 289
|
Length = 299 |
| >gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 48.2 bits (115), Expect = 1e-06
Identities = 42/182 (23%), Positives = 75/182 (41%), Gaps = 7/182 (3%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG---LQVSGSVCDL 71
ALV G + GIG A ELAA G V +R + + + + ++ G + V D
Sbjct: 12 PALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTD- 70
Query: 72 KIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQ 131
K + + G++ +L++ AG + E + E F + + + A L+
Sbjct: 71 ---PDSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLAT 127
Query: 132 LAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTV 191
P + G++IF+ S + P Y ++K + + NL E +R + V
Sbjct: 128 AVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIV 187
Query: 192 AP 193
P
Sbjct: 188 HP 189
|
Length = 274 |
| >gnl|CDD|178331 PLN02730, PLN02730, enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Score = 47.5 bits (113), Expect = 3e-06
Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 20/190 (10%)
Query: 82 ETVSSQFDGKLNILINN--AGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKS 139
E+V + F G ++IL+++ G + K E + + + ++ + S L Q P++
Sbjct: 112 ESVKADF-GSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIMNP 170
Query: 140 AGNGNIIFISSVAGVIAIP-----MCSIYASSKVAMNQLTKNLACEWA-KDKIRVNTVAP 193
G I ++ +A IP M +S+K A+ T+ LA E K KIRVNT++
Sbjct: 171 GGA--SISLTYIASERIIPGYGGGM----SSAKAALESDTRVLAFEAGRKYKIRVNTISA 224
Query: 194 WVIRTPLLDTVEKDSNFLEHANRMVL-RTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVI 252
PL K F++ P+ + +EV + AFL S +TG I
Sbjct: 225 ----GPLGSRAAKAIGFIDDMIEYSYANAPLQKELTADEVGNAAAFLASPLASAITGATI 280
Query: 253 CVDGGYSVTG 262
VD G + G
Sbjct: 281 YVDNGLNAMG 290
|
Length = 303 |
| >gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs | Back alignment and domain information |
|---|
Score = 46.8 bits (111), Expect = 4e-06
Identities = 37/141 (26%), Positives = 59/141 (41%), Gaps = 7/141 (4%)
Query: 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN---QRIQEWKSKGLQVSGSVC 69
G ++TG GIG+ A GA V RN + + RI E K +V
Sbjct: 1 GKVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKA-RVEAMTL 59
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
DL ++ E ++ + L++L+ NA F T TE+ T N ++L
Sbjct: 60 DLASLRSVQRFAEAFKAK-NSPLHVLVCNAAVFALPWT--LTEDGLETTFQVNHLGHFYL 116
Query: 130 SQLAHPLLKSAGNGNIIFISS 150
QL +L+ + +I +SS
Sbjct: 117 VQLLEDVLRRSAPARVIVVSS 137
|
Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284 |
| >gnl|CDD|168626 PRK06603, PRK06603, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 46.2 bits (109), Expect = 5e-06
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 7/151 (4%)
Query: 113 EDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQ 172
E+F + + S LS+ A L+ G+ I+ ++ IP ++ +K A+
Sbjct: 112 ENFHNSLHISCYSLLELSRSAEALMHDGGS--IVTLTYYGAEKVIPNYNVMGVAKAALEA 169
Query: 173 LTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLE-HANRMVLRTPMLRPGEPNE 231
K LA + ++ IRVN ++ I+T + S L+ HA P+ R +
Sbjct: 170 SVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAA----TAPLKRNTTQED 225
Query: 232 VSSVVAFLCLSATSYVTGQVICVDGGYSVTG 262
V +L + VTG++ VD GY++ G
Sbjct: 226 VGGAAVYLFSELSKGVTGEIHYVDCGYNIMG 256
|
Length = 260 |
| >gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 8e-06
Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 17/145 (11%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN----ETELNQRIQEWKSKGLQVSG 66
L G TA+VTGG G+G LA GA V +R L I + L ++
Sbjct: 24 LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAG-IDGVEVVMLDLA- 81
Query: 67 SVCDLK-IRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFES 125
DL+ +RA E+ +++ +++ILINNAG ET + + TN
Sbjct: 82 ---DLESVRAFAERFLDSGR-----RIDILINNAGVMACPETR--VGDGWEAQFATNHLG 131
Query: 126 AYHLSQLAHPLLKSAGNGNIIFISS 150
+ L L P L + ++ +SS
Sbjct: 132 HFALVNLLWPALAAGAGARVVALSS 156
|
Length = 315 |
| >gnl|CDD|236057 PRK07578, PRK07578, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 44.4 bits (106), Expect = 1e-05
Identities = 59/243 (24%), Positives = 90/243 (37%), Gaps = 45/243 (18%)
Query: 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKI 73
M LV G + IG AVV EL+ ++ T R+ S +QV D+
Sbjct: 1 MKILVIGASGTIGRAVVAELSKRHEVI-TAGRS------------SGDVQV-----DITD 42
Query: 74 RAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLA 133
A L E V GK++ +++ AG E T+EDF+ + + +L +
Sbjct: 43 PASIRALFEKV-----GKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIG 97
Query: 134 HPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAP 193
L G+ S + IP + A+ A+ K A E IR+N V+P
Sbjct: 98 QHYL--NDGGSFTLTSGILSDEPIPGGASAATVNGALEGFVKAAALE-LPRGIRINVVSP 154
Query: 194 WVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVV-AFLCLSATSYVTGQVI 252
TV +S + P EP + V A++ S TG+V
Sbjct: 155 ---------TVLTES--------LEKYGPFFPGFEPVPAARVALAYV-RSVEGAQTGEVY 196
Query: 253 CVD 255
V
Sbjct: 197 KVG 199
|
Length = 199 |
| >gnl|CDD|181260 PRK08159, PRK08159, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 4e-05
Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 12/199 (6%)
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKET-----TEFTEEDFSTVMTTNF 123
CD+ A + + ET+ ++ GKL+ +++ G F K+ + + ++F+ M +
Sbjct: 67 CDVTDEASIDAVFETLEKKW-GKLDFVVHAIG-FSDKDELTGRYVDTSRDNFTMTMDISV 124
Query: 124 ESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAK 183
S ++Q A L+ G+ I+ ++ +P ++ +K A+ K LA +
Sbjct: 125 YSFTAVAQRAEKLMTDGGS--ILTLTYYGAEKVMPHYNVMGVAKAALEASVKYLAVDLGP 182
Query: 184 DKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243
IRVN ++ I+T L + D ++ N P+ R EV +L
Sbjct: 183 KNIRVNAISAGPIKT-LAASGIGDFRYILKWNE--YNAPLRRTVTIEEVGDSALYLLSDL 239
Query: 244 TSYVTGQVICVDGGYSVTG 262
+ VTG+V VD GY V G
Sbjct: 240 SRGVTGEVHHVDSGYHVVG 258
|
Length = 272 |
| >gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 4e-05
Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 15/148 (10%)
Query: 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQ---RIQEWKSKGLQVSGSV 68
G A+VTG G+GY LAA GA V RN + RI + G V+
Sbjct: 15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITA-ATPGADVTLQE 73
Query: 69 CDL----KIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFE 124
DL +RA + L + + ++++LINNAG + T T + F TN
Sbjct: 74 LDLTSLASVRAAADAL----RAAYP-RIDLLINNAGVMYTPKQT--TADGFELQFGTNHL 126
Query: 125 SAYHLSQLAHPLLKSAGNGNIIFISSVA 152
+ L+ L L ++ +SS
Sbjct: 127 GHFALTGLLLDRLLPVPGSRVVTVSSGG 154
|
Length = 306 |
| >gnl|CDD|181609 PRK09009, PRK09009, C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 4e-05
Identities = 48/187 (25%), Positives = 75/187 (40%), Gaps = 40/187 (21%)
Query: 14 MTALVTGGTKGIGYAVVEELAA--FGAIVHTCSRNETELNQRIQEWKSKGLQ-VSGSVCD 70
M L+ GG+ GIG A+V++L A VH R+ +++ +Q + V D
Sbjct: 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP------DFQHDNVQWHALDVTD 54
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTF------IPKETTEFTEEDFSTVMTTNFE 124
E ++ +S QF +L+ LIN G K + F +T N
Sbjct: 55 -------EAEIKQLSEQFT-QLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTL 106
Query: 125 SAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSI----------YASSKVAMNQLT 174
+ L++ P LK + + IS+ G SI Y +SK A+N
Sbjct: 107 PSLLLAKHFTPKLKQSESAKFAVISAKVG-------SISDNRLGGWYSYRASKAALNMFL 159
Query: 175 KNLACEW 181
K L+ EW
Sbjct: 160 KTLSIEW 166
|
Length = 235 |
| >gnl|CDD|180596 PRK06505, PRK06505, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 6e-05
Identities = 45/198 (22%), Positives = 91/198 (45%), Gaps = 12/198 (6%)
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKET-----TEFTEEDFSTVMTTNF 123
CD++ A + + E + ++ GKL+ +++ G F K + T E+FS M +
Sbjct: 64 CDVEDIASVDAVFEALEKKW-GKLDFVVHAIG-FSDKNELKGRYADTTRENFSRTMVISC 121
Query: 124 ESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAK 183
S +++ A L+ G+ ++ ++ +P ++ +K A+ + LA ++
Sbjct: 122 FSFTEIAKRAAKLMPDGGS--MLTLTYGGSTRVMPNYNVMGVAKAALEASVRYLAADYGP 179
Query: 184 DKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243
IRVN ++ +RT L D+ + + +P+ R +EV +L
Sbjct: 180 QGIRVNAISAGPVRT-LAGAGIGDARAIFSYQQR--NSPLRRTVTIDEVGGSALYLLSDL 236
Query: 244 TSYVTGQVICVDGGYSVT 261
+S VTG++ VD GY++
Sbjct: 237 SSGVTGEIHFVDSGYNIV 254
|
Length = 271 |
| >gnl|CDD|135642 PRK05884, PRK05884, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 1e-04
Identities = 58/251 (23%), Positives = 89/251 (35%), Gaps = 41/251 (16%)
Query: 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKI 73
+ LVTGG +G + E G V +L E +K L V VCD
Sbjct: 1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDL-----EVAAKELDVDAIVCDNTD 55
Query: 74 RAQREKLMETVSSQFDGKLNILIN-NAGTFIPKETTEFTEEDFSTVMTTNFE----SAYH 128
A +E F L+ ++N A ++ + ++ D + + SA
Sbjct: 56 PAS----LEEARGLFPHHLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVL 111
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVIA--IPMCSIYASSKVAMNQLTKNLACEWAKDKI 186
Q L+S G S+ V+ P S A+ K A++ T A + I
Sbjct: 112 TVQSVGDHLRSGG--------SIISVVPENPPAGSAEAAIKAALSNWTAGQAAVFGTRGI 163
Query: 187 RVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246
+N VA P D + RTP P E++ + FL A +
Sbjct: 164 TINAVACGRSVQPGYDGLS--------------RTP---PPVAAEIARLALFLTTPAARH 206
Query: 247 VTGQVICVDGG 257
+TGQ + V G
Sbjct: 207 ITGQTLHVSHG 217
|
Length = 223 |
| >gnl|CDD|236229 PRK08303, PRK08303, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.001
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 17/102 (16%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN-----------ET--ELNQRIQE 56
L+G ALV G T+G G + EL A GA V+ R+ ET E + +
Sbjct: 5 PLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTA 64
Query: 57 WKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINN 98
+G+ V D + Q L+E + + G+L+IL+N+
Sbjct: 65 AGGRGIAVQ---VDHLVPEQVRALVERIDREQ-GRLDILVND 102
|
Length = 305 |
| >gnl|CDD|236124 PRK07889, PRK07889, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 0.002
Identities = 48/168 (28%), Positives = 67/168 (39%), Gaps = 41/168 (24%)
Query: 113 EDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGV-----IAIPMCSIYASSK 167
ED +T + SAY L LA LL G S+ G+ +A P +K
Sbjct: 111 EDVATALHV---SAYSLKSLAKALLPLMNEG-----GSIVGLDFDATVAWPAYDWMGVAK 162
Query: 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRT------PLLDTVEK--DSNFLEHANRMVL 219
A+ + LA + IRVN VA IRT P + +E+ D
Sbjct: 163 AALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDE----------- 211
Query: 220 RTPM---LRPGEPNEVSSVVAFLC--LSATSYVTGQVICVDGGYSVTG 262
R P+ ++ P +VVA L AT TG+++ VDGG G
Sbjct: 212 RAPLGWDVKDPTP-VARAVVALLSDWFPAT---TGEIVHVDGGAHAMG 255
|
Length = 256 |
| >gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 0.002
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVS----- 65
KG T LVTGG IG +V ++ FG + R+E +L++ ++E +S+
Sbjct: 1 KGKTILVTGGAGSIGSELVRQILKFGPKKLIVFDRDENKLHELVRELRSRFPHDKLRFII 60
Query: 66 GSVCDLKI 73
G V D +
Sbjct: 61 GDVRDKER 68
|
UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287 |
| >gnl|CDD|187657 cd08954, KR_1_FAS_SDR_x, beta-ketoacyl reductase (KR) domain of fatty acid synthase (FAS), subgroup 1, complex (x) SDRs | Back alignment and domain information |
|---|
Score = 37.8 bits (88), Expect = 0.004
Identities = 41/178 (23%), Positives = 66/178 (37%), Gaps = 27/178 (15%)
Query: 13 GMTALVTGGTKGIGYAVVEELAAFGAI--VHTCSRN--ETELNQRIQEWKS---KGLQVS 65
G + L+TGG+ G+G +++ L GA+ + SR+ + EL I+EWKS K VS
Sbjct: 218 GKSYLITGGSGGLGLEILKWLVKRGAVENIIILSRSGMKWELELLIREWKSQNIKFHFVS 277
Query: 66 GSVCDLKIRAQREKLMETVSSQFDGKLNIL-----INNAGTFIPKETTEFTEEDFSTVMT 120
V D +E + I + A I K TE F +V
Sbjct: 278 VDVSD-------VSSLEKAINLILNAPKIGPIGGIFHLAFVLIDKVLEIDTESLFISVNK 330
Query: 121 TNFESAYHLSQL---AHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTK 175
A +L L + SSV+ + Y + ++ L++
Sbjct: 331 AKVMGAINLHNQSIKRCWKLD-----YFVLFSSVSSIRGSAGQCNYVCANSVLDSLSR 383
|
NADP-dependent KR domain of the multidomain type I FAS, a complex SDR family. This subfamily also includes proteins identified as polyketide synthase (PKS), a protein with related modular protein architecture and similar function. It includes the KR domains of mammalian and chicken FAS, and Dictyostelium discoideum putative polyketide synthases (PKSs). These KR domains contain two subdomains, each of which is related to SDR Rossmann fold domains. However, while the C-terminal subdomain has an active site similar to the other SDRs and a NADP-binding capability, the N-terminal SDR-like subdomain is truncated and lacks these functions, serving a supportive structural role. In some instances, such as porcine FAS, an enoyl reductase (a Rossman fold NAD-binding domain of the medium-chain dehydrogenase/reductase, MDR family) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consists of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthesis uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-ketoacyl reductase (KR), forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-enoyl reductase (ER); this KR and ER are members of the SDR family. This KR subfamily has an active site tetrad with a similar 3D orientation compared to archetypical SDRs, but the active site Lys and Asn residue positions are swapped. The characteristic NADP-binding is typical of the multidomain complex SDRs, with a GGXGXXG NADP binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 452 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 263 | |||
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 100.0 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 100.0 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 100.0 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 100.0 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 100.0 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 100.0 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 100.0 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 100.0 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 100.0 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 100.0 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 100.0 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 100.0 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 100.0 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 100.0 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 100.0 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 100.0 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 100.0 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 100.0 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 100.0 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 100.0 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 100.0 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK08643 | 256 | acetoin reductase; Validated | 100.0 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 100.0 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 100.0 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 100.0 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 100.0 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 100.0 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 100.0 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 100.0 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 100.0 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 100.0 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 100.0 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 100.0 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 100.0 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 100.0 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 100.0 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 100.0 | |
| PRK05717 | 255 | oxidoreductase; Validated | 100.0 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 100.0 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 100.0 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 100.0 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 100.0 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 100.0 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 100.0 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 100.0 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 100.0 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 100.0 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 100.0 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 100.0 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 100.0 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 100.0 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 100.0 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 100.0 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 100.0 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 100.0 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 100.0 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 100.0 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 100.0 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 100.0 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 100.0 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 100.0 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 100.0 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PLN00015 | 308 | protochlorophyllide reductase | 100.0 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 100.0 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 100.0 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 100.0 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 100.0 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 100.0 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 100.0 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 100.0 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 100.0 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 100.0 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 100.0 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 100.0 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 100.0 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 100.0 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 100.0 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 100.0 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 100.0 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 100.0 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 100.0 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 100.0 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 100.0 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 100.0 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 100.0 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 100.0 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 100.0 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 100.0 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 100.0 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 100.0 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 100.0 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 100.0 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 100.0 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 100.0 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.98 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.97 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 99.96 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.96 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 99.95 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 99.94 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.94 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.93 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.93 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.93 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.92 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 99.91 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.9 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.9 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.9 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 99.89 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.89 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.89 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.89 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.88 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.88 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.88 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.88 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.88 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 99.87 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.87 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.87 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.86 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.86 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.85 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.85 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 99.85 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.85 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.84 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.84 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.83 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.82 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.82 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.81 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.81 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.81 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.81 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.8 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.8 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.79 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.78 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.78 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.77 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.77 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.76 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.75 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.75 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.75 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.75 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.74 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.72 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.72 | |
| KOG4022 | 236 | consensus Dihydropteridine reductase DHPR/QDPR [Am | 99.71 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.66 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.65 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.63 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.6 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.6 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.58 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.58 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.56 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.56 | |
| PF08643 | 299 | DUF1776: Fungal family of unknown function (DUF177 | 99.55 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.52 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 99.5 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.5 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.47 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.46 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.44 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.43 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.42 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.42 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.39 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.37 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.37 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 99.37 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 99.36 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 99.25 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.2 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.13 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 98.91 | |
| COG4982 | 866 | 3-oxoacyl-[acyl-carrier protein] | 98.89 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 98.88 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 98.87 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 98.86 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 98.81 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 98.78 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 98.75 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 98.72 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 98.67 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 98.63 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 98.61 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 98.6 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 98.46 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 98.42 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 98.32 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 98.29 | |
| PLN00106 | 323 | malate dehydrogenase | 98.28 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 98.28 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 98.21 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 98.17 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 98.16 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 98.13 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 98.13 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 97.99 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 97.97 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 97.94 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.92 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 97.91 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 97.87 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 97.85 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 97.8 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 97.71 | |
| PLN02520 | 529 | bifunctional 3-dehydroquinate dehydratase/shikimat | 97.71 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 97.68 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 97.64 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 97.63 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 97.57 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 97.55 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 97.5 | |
| PRK14968 | 188 | putative methyltransferase; Provisional | 97.46 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 97.45 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 97.44 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 97.44 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 97.41 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 97.39 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 97.38 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 97.37 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 97.37 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 97.35 | |
| COG2130 | 340 | Putative NADP-dependent oxidoreductases [General f | 97.34 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 97.34 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 97.32 | |
| PF12242 | 78 | Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2 | 97.31 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 97.3 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 97.26 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 97.26 | |
| PRK13982 | 475 | bifunctional SbtC-like/phosphopantothenoylcysteine | 97.25 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 97.23 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 97.22 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 97.2 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 97.19 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 97.17 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 97.13 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 97.13 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 97.12 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 97.1 | |
| PRK04308 | 445 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.07 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 97.04 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 97.03 | |
| cd05276 | 323 | p53_inducible_oxidoreductase PIG3 p53-inducible qu | 96.99 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 96.97 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 96.96 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 96.95 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 96.95 | |
| cd05288 | 329 | PGDH Prostaglandin dehydrogenases. Prostaglandins | 96.95 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 96.95 | |
| COG2263 | 198 | Predicted RNA methylase [Translation, ribosomal st | 96.92 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 96.91 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 96.9 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 96.85 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 96.85 | |
| PRK09310 | 477 | aroDE bifunctional 3-dehydroquinate dehydratase/sh | 96.83 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 96.76 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.75 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 96.73 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 96.73 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 96.71 | |
| KOG1196 | 343 | consensus Predicted NAD-dependent oxidoreductase [ | 96.71 | |
| cd05212 | 140 | NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom | 96.69 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 96.69 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 96.68 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 96.68 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 96.66 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 96.66 | |
| TIGR00561 | 511 | pntA NAD(P) transhydrogenase, alpha subunit. In so | 96.62 | |
| TIGR03201 | 349 | dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co | 96.62 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 96.61 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.6 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 96.6 | |
| cd08281 | 371 | liver_ADH_like1 Zinc-dependent alcohol dehydrogena | 96.57 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 96.55 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 96.54 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 96.53 | |
| TIGR02824 | 325 | quinone_pig3 putative NAD(P)H quinone oxidoreducta | 96.51 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 96.51 | |
| TIGR03451 | 358 | mycoS_dep_FDH mycothiol-dependent formaldehyde deh | 96.44 | |
| cd08268 | 328 | MDR2 Medium chain dehydrogenases/reductase (MDR)/z | 96.43 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.41 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.4 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 96.39 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 96.37 | |
| COG3007 | 398 | Uncharacterized paraquat-inducible protein B [Func | 96.34 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 96.3 | |
| COG2227 | 243 | UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- | 96.28 | |
| PF02882 | 160 | THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl | 96.26 | |
| PRK14967 | 223 | putative methyltransferase; Provisional | 96.24 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 96.23 | |
| cd08292 | 324 | ETR_like_2 2-enoyl thioester reductase (ETR) like | 96.2 | |
| TIGR03366 | 280 | HpnZ_proposed putative phosphonate catabolism asso | 96.2 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 96.15 | |
| cd08233 | 351 | butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog | 96.14 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 96.13 | |
| cd08231 | 361 | MDR_TM0436_like Hypothetical enzyme TM0436 resembl | 96.12 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 96.12 | |
| PRK10309 | 347 | galactitol-1-phosphate dehydrogenase; Provisional | 96.11 | |
| cd08244 | 324 | MDR_enoyl_red Possible enoyl reductase. Member ide | 96.11 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 96.09 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 96.09 | |
| PF02737 | 180 | 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind | 96.08 | |
| PF13241 | 103 | NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ | 96.07 | |
| cd08239 | 339 | THR_DH_like L-threonine dehydrogenase (TDH)-like. | 96.07 | |
| PRK14188 | 296 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.03 | |
| cd08241 | 323 | QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t | 96.03 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 96.03 | |
| PRK12480 | 330 | D-lactate dehydrogenase; Provisional | 96.01 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 95.97 | |
| TIGR00537 | 179 | hemK_rel_arch HemK-related putative methylase. The | 95.96 | |
| cd08291 | 324 | ETR_like_1 2-enoyl thioester reductase (ETR) like | 95.94 | |
| TIGR01757 | 387 | Malate-DH_plant malate dehydrogenase, NADP-depende | 95.94 | |
| PTZ00082 | 321 | L-lactate dehydrogenase; Provisional | 95.93 | |
| TIGR02818 | 368 | adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr | 95.93 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 95.93 | |
| cd05191 | 86 | NAD_bind_amino_acid_DH NAD(P) binding domain of am | 95.92 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 95.9 | |
| cd08230 | 355 | glucose_DH Glucose dehydrogenase. Glucose dehydrog | 95.89 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 95.88 | |
| cd08290 | 341 | ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi | 95.88 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 95.87 | |
| KOG1197 | 336 | consensus Predicted quinone oxidoreductase [Energy | 95.87 | |
| PRK14191 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.86 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 95.84 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 95.83 | |
| PLN02602 | 350 | lactate dehydrogenase | 95.81 | |
| PF00107 | 130 | ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: | 95.81 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 95.79 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 95.78 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 95.78 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 95.78 | |
| cd08289 | 326 | MDR_yhfp_like Yhfp putative quinone oxidoreductase | 95.78 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 95.77 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 95.77 | |
| cd05290 | 307 | LDH_3 A subgroup of L-lactate dehydrogenases. L-la | 95.76 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 95.76 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 95.73 | |
| cd08243 | 320 | quinone_oxidoreductase_like_1 Quinone oxidoreducta | 95.69 | |
| PRK06932 | 314 | glycerate dehydrogenase; Provisional | 95.68 | |
| cd05286 | 320 | QOR2 Quinone oxidoreductase (QOR). Quinone oxidore | 95.67 | |
| cd08300 | 368 | alcohol_DH_class_III class III alcohol dehydrogena | 95.66 | |
| cd08250 | 329 | Mgc45594_like Mgc45594 gene product and other MDR | 95.64 | |
| PRK10792 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.64 | |
| PRK14189 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.63 | |
| cd05282 | 323 | ETR_like 2-enoyl thioester reductase-like. 2-enoyl | 95.63 | |
| cd05292 | 308 | LDH_2 A subgroup of L-lactate dehydrogenases. L-la | 95.63 | |
| cd05295 | 452 | MDH_like Malate dehydrogenase-like. These MDH-like | 95.58 | |
| cd08238 | 410 | sorbose_phosphate_red L-sorbose-1-phosphate reduct | 95.56 | |
| PTZ00354 | 334 | alcohol dehydrogenase; Provisional | 95.53 | |
| PLN02586 | 360 | probable cinnamyl alcohol dehydrogenase | 95.53 | |
| PRK14190 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.53 | |
| COG0039 | 313 | Mdh Malate/lactate dehydrogenases [Energy producti | 95.51 | |
| PRK15438 | 378 | erythronate-4-phosphate dehydrogenase PdxB; Provis | 95.49 | |
| TIGR02819 | 393 | fdhA_non_GSH formaldehyde dehydrogenase, glutathio | 95.49 | |
| PLN02178 | 375 | cinnamyl-alcohol dehydrogenase | 95.48 | |
| PRK09288 | 395 | purT phosphoribosylglycinamide formyltransferase 2 | 95.48 | |
| PRK14176 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.47 | |
| cd08297 | 341 | CAD3 Cinnamyl alcohol dehydrogenases (CAD). These | 95.46 | |
| PLN02740 | 381 | Alcohol dehydrogenase-like | 95.45 | |
| PRK08223 | 287 | hypothetical protein; Validated | 95.44 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 95.43 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 95.41 | |
| COG1179 | 263 | Dinucleotide-utilizing enzymes involved in molybdo | 95.41 | |
| PRK02006 | 498 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.41 | |
| PRK12550 | 272 | shikimate 5-dehydrogenase; Reviewed | 95.37 | |
| PRK14183 | 281 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.37 | |
| PRK10754 | 327 | quinone oxidoreductase, NADPH-dependent; Provision | 95.35 | |
| PLN03139 | 386 | formate dehydrogenase; Provisional | 95.34 | |
| PRK08410 | 311 | 2-hydroxyacid dehydrogenase; Provisional | 95.33 | |
| PRK14173 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.33 | |
| PRK14177 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.33 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 95.28 | |
| cd00300 | 300 | LDH_like L-lactate dehydrogenase-like enzymes. Mem | 95.26 | |
| PRK14172 | 278 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.25 | |
| PRK14180 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.24 | |
| PF12076 | 164 | Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194 | 95.21 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 95.2 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 95.2 | |
| cd08301 | 369 | alcohol_DH_plants Plant alcohol dehydrogenase. NAD | 95.19 |
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-51 Score=311.07 Aligned_cols=243 Identities=30% Similarity=0.399 Sum_probs=222.6
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
++.|+++|||+++|||+++++.|++.|++|++.+++...+++++..+...+. -..+.||+++.++++..+++..+.+ +
T Consensus 12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~-h~aF~~DVS~a~~v~~~l~e~~k~~-g 89 (256)
T KOG1200|consen 12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGD-HSAFSCDVSKAHDVQNTLEEMEKSL-G 89 (256)
T ss_pred HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCc-cceeeeccCcHHHHHHHHHHHHHhc-C
Confidence 5689999999999999999999999999999999999999999888866433 3456899999999999999999998 7
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhh--CCCceEEEEccccccccCCCCcchhhHHH
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKS--AGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+|+++|||||+.....+..+..++|++.+.+|+.|.|.++|++.+.|.. +++.+||++||+.+..+.-+...|+++|+
T Consensus 90 ~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAsK~ 169 (256)
T KOG1200|consen 90 TPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAASKG 169 (256)
T ss_pred CCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhhcC
Confidence 9999999999998888888999999999999999999999999998543 34459999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCcc
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~ 248 (263)
++.+|+|++++|++.+|||||.|+||+|.|||....+++ ...+.....|+++++++||||+.+.||+|+.++|+|
T Consensus 170 GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~~-----v~~ki~~~iPmgr~G~~EevA~~V~fLAS~~ssYiT 244 (256)
T KOG1200|consen 170 GVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPPK-----VLDKILGMIPMGRLGEAEEVANLVLFLASDASSYIT 244 (256)
T ss_pred ceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcCHH-----HHHHHHccCCccccCCHHHHHHHHHHHhcccccccc
Confidence 999999999999999999999999999999999876543 236667788999999999999999999999999999
Q ss_pred CcEEEeCCCccc
Q 024752 249 GQVICVDGGYSV 260 (263)
Q Consensus 249 G~~i~~dgG~~~ 260 (263)
|+.+.++||+.+
T Consensus 245 G~t~evtGGl~m 256 (256)
T KOG1200|consen 245 GTTLEVTGGLAM 256 (256)
T ss_pred ceeEEEeccccC
Confidence 999999999864
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-49 Score=333.32 Aligned_cols=252 Identities=31% Similarity=0.413 Sum_probs=223.2
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc-CCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
+++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++... +.++.++.+|++++++++++++++. +
T Consensus 4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-~ 82 (263)
T PRK08339 4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-N 82 (263)
T ss_pred cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-h
Confidence 4688999999999999999999999999999999999999888888777653 5568899999999999999999986 4
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+ +++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|+++|
T Consensus 83 ~-g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~asK 161 (263)
T PRK08339 83 I-GEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVR 161 (263)
T ss_pred h-CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHHHH
Confidence 6 789999999998777778889999999999999999999999999999988789999999999988888899999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccccc------chhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcC
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKD------SNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCL 241 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s 241 (263)
+|+++|+++++.|++++|||||+|+||+++|++....... ....+....+....|++++..|+|+++++.||++
T Consensus 162 aal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~s 241 (263)
T PRK08339 162 ISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLVAFLAS 241 (263)
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999986432110 0111222344556789999999999999999999
Q ss_pred CCCCCccCcEEEeCCCccccC
Q 024752 242 SATSYVTGQVICVDGGYSVTG 262 (263)
Q Consensus 242 ~~~~~~~G~~i~~dgG~~~~~ 262 (263)
+.+.++||+.+.+|||+..+-
T Consensus 242 ~~~~~itG~~~~vdgG~~~~~ 262 (263)
T PRK08339 242 DLGSYINGAMIPVDGGRLNSV 262 (263)
T ss_pred chhcCccCceEEECCCccccC
Confidence 999999999999999998764
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-48 Score=325.42 Aligned_cols=246 Identities=28% Similarity=0.421 Sum_probs=217.3
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
+++++|+++||||++|||++++++|+++|++|++++|+.. ++..++++..+.++.++.+|++++++++++++++.+.+
T Consensus 4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (251)
T PRK12481 4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVM 81 (251)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHc
Confidence 5789999999999999999999999999999999988643 34445555556678899999999999999999999988
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccccccCCCCcchhhHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+++|++|||||+....++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.+....|++||
T Consensus 82 -g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK 160 (251)
T PRK12481 82 -GHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASK 160 (251)
T ss_pred -CCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHH
Confidence 8999999999998777788899999999999999999999999999998764 58999999999998888889999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
+|+++|+++++.|++++||+||+|+||+++|++......... .........|.+++.+|+|+++++.||+++.+.++
T Consensus 161 ~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~---~~~~~~~~~p~~~~~~peeva~~~~~L~s~~~~~~ 237 (251)
T PRK12481 161 SAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTA---RNEAILERIPASRWGTPDDLAGPAIFLSSSASDYV 237 (251)
T ss_pred HHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChH---HHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCc
Confidence 999999999999999999999999999999998765432211 11333456788999999999999999999999999
Q ss_pred cCcEEEeCCCccc
Q 024752 248 TGQVICVDGGYSV 260 (263)
Q Consensus 248 ~G~~i~~dgG~~~ 260 (263)
+|+.|.+|||+..
T Consensus 238 ~G~~i~vdgg~~~ 250 (251)
T PRK12481 238 TGYTLAVDGGWLA 250 (251)
T ss_pred CCceEEECCCEec
Confidence 9999999999864
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-49 Score=327.19 Aligned_cols=249 Identities=28% Similarity=0.386 Sum_probs=215.6
Q ss_pred CCCCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEeeCCch--hHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHH
Q 024752 9 WSLKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRNET--ELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 9 ~~~~~k~vlVtGas--~giG~~~a~~l~~~g~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 84 (263)
+++++|+++||||+ +|||+++|++|+++|++|++.+|+.+ +.++..+++.+...++.++++|++++++++++++++
T Consensus 2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~ 81 (258)
T PRK07370 2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETI 81 (258)
T ss_pred cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHH
Confidence 45789999999986 89999999999999999998876543 345556666554455778899999999999999999
Q ss_pred HhhcCCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCC
Q 024752 85 SSQFDGKLNILINNAGTFIP----KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMC 160 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~ 160 (263)
.+++ +++|++|||||+... .++.+.+.++|++.|++|+.+++.++++++|.|++ +|+||++||..+..+.|+.
T Consensus 82 ~~~~-g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~ 158 (258)
T PRK07370 82 KQKW-GKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE--GGSIVTLTYLGGVRAIPNY 158 (258)
T ss_pred HHHc-CCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--CCeEEEEeccccccCCccc
Confidence 9998 899999999998642 56778899999999999999999999999999975 4899999999998888899
Q ss_pred cchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHc
Q 024752 161 SIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC 240 (263)
Q Consensus 161 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~ 240 (263)
..|++||+|+++|+++++.|++++||+||+|+||+++|++........ +.........|++++..|+|+++++.||+
T Consensus 159 ~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~---~~~~~~~~~~p~~r~~~~~dva~~~~fl~ 235 (258)
T PRK07370 159 NVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGIL---DMIHHVEEKAPLRRTVTQTEVGNTAAFLL 235 (258)
T ss_pred chhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccch---hhhhhhhhcCCcCcCCCHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999764331111 11233344678899999999999999999
Q ss_pred CCCCCCccCcEEEeCCCccccCC
Q 024752 241 LSATSYVTGQVICVDGGYSVTGF 263 (263)
Q Consensus 241 s~~~~~~~G~~i~~dgG~~~~~~ 263 (263)
++.+.++|||.+.+|||++..||
T Consensus 236 s~~~~~~tG~~i~vdgg~~~~~~ 258 (258)
T PRK07370 236 SDLASGITGQTIYVDAGYCIMGM 258 (258)
T ss_pred ChhhccccCcEEEECCcccccCC
Confidence 99999999999999999999987
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-48 Score=324.94 Aligned_cols=253 Identities=28% Similarity=0.411 Sum_probs=224.9
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHh--cCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS--KGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
++++|+++||||++|||++++++|+++|++|++++|+++.+++..+++.. .+.++.++++|+++++++.++++++.+.
T Consensus 4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (260)
T PRK07063 4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA 83 (260)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 37899999999999999999999999999999999999998888888876 4567889999999999999999999999
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+ +++|++|||||.....+..+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++..+|+++|
T Consensus 84 ~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK 162 (260)
T PRK07063 84 F-GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAK 162 (260)
T ss_pred h-CCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHHHHH
Confidence 8 899999999998766666778899999999999999999999999999887789999999999998888899999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccccc-chhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKD-SNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
+|+++++++++.|++++||+||+|+||+++|++....... ..............|++++.+|+|++++++||+++.+.+
T Consensus 163 aa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~va~~~~fl~s~~~~~ 242 (260)
T PRK07063 163 HGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAVFLASDEAPF 242 (260)
T ss_pred HHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccc
Confidence 9999999999999999999999999999999986543211 111111233445678899999999999999999999999
Q ss_pred ccCcEEEeCCCccccCC
Q 024752 247 VTGQVICVDGGYSVTGF 263 (263)
Q Consensus 247 ~~G~~i~~dgG~~~~~~ 263 (263)
+||+.|.+|||+++.++
T Consensus 243 itG~~i~vdgg~~~~~~ 259 (260)
T PRK07063 243 INATCITIDGGRSVLYH 259 (260)
T ss_pred cCCcEEEECCCeeeecc
Confidence 99999999999998764
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-48 Score=329.25 Aligned_cols=247 Identities=23% Similarity=0.326 Sum_probs=209.6
Q ss_pred CCCCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHH-hcCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 9 WSLKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWK-SKGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 9 ~~~~~k~vlVtGas--~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
|.+++|+++||||+ +|||+++|++|+++|++|++++|+.+ .++..+++. +.+.. ..+++|++|+++++++++++.
T Consensus 1 ~~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~ 78 (274)
T PRK08415 1 MIMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLK 78 (274)
T ss_pred CccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHH
Confidence 56789999999997 89999999999999999999999853 223333332 22333 578999999999999999999
Q ss_pred hhcCCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCc
Q 024752 86 SQFDGKLNILINNAGTFIP----KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCS 161 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~ 161 (263)
+++ +++|++|||||+... .++.+.+.++|++.|++|+.++++++++++|.|++ +|+||++||..+..+.|.+.
T Consensus 79 ~~~-g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~--~g~Iv~isS~~~~~~~~~~~ 155 (274)
T PRK08415 79 KDL-GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND--GASVLTLSYLGGVKYVPHYN 155 (274)
T ss_pred HHc-CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc--CCcEEEEecCCCccCCCcch
Confidence 998 899999999998643 56778899999999999999999999999999976 48999999999988888889
Q ss_pred chhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcC
Q 024752 162 IYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCL 241 (263)
Q Consensus 162 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s 241 (263)
.|++||+|+.+|+++++.|++++||+||+|+||+|+|++.......... ........|++++..|+||+++++||++
T Consensus 156 ~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~---~~~~~~~~pl~r~~~pedva~~v~fL~s 232 (274)
T PRK08415 156 VMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMI---LKWNEINAPLKKNVSIEEVGNSGMYLLS 232 (274)
T ss_pred hhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHH---hhhhhhhCchhccCCHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999875432111110 1112235688999999999999999999
Q ss_pred CCCCCccCcEEEeCCCccccCC
Q 024752 242 SATSYVTGQVICVDGGYSVTGF 263 (263)
Q Consensus 242 ~~~~~~~G~~i~~dgG~~~~~~ 263 (263)
+.+.++||+.|.+|||+.+.|+
T Consensus 233 ~~~~~itG~~i~vdGG~~~~~~ 254 (274)
T PRK08415 233 DLSSGVTGEIHYVDAGYNIMGM 254 (274)
T ss_pred hhhhcccccEEEEcCcccccCC
Confidence 9999999999999999987664
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-48 Score=326.70 Aligned_cols=245 Identities=22% Similarity=0.312 Sum_probs=208.6
Q ss_pred CCCCCEEEEecCCC--chHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHH-hcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 10 SLKGMTALVTGGTK--GIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWK-SKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 10 ~~~~k~vlVtGas~--giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
.+++|++|||||++ |||+++|++|+++|++|++++|+....+. .+++. +.+. ...+++|++++++++++++++.+
T Consensus 4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~-~~~~~~~~g~-~~~~~~Dv~d~~~v~~~~~~~~~ 81 (271)
T PRK06505 4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKR-VKPLAESLGS-DFVLPCDVEDIASVDAVFEALEK 81 (271)
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHH-HHHHHHhcCC-ceEEeCCCCCHHHHHHHHHHHHH
Confidence 47899999999997 99999999999999999999998644333 33332 2233 35789999999999999999999
Q ss_pred hcCCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcc
Q 024752 87 QFDGKLNILINNAGTFIP----KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSI 162 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~ 162 (263)
++ +++|++|||||+... .++.+.+.++|++.+++|+.++++++++++|+|++ +|+||++||..+..+.|++..
T Consensus 82 ~~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~ 158 (271)
T PRK06505 82 KW-GKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD--GGSMLTLTYGGSTRVMPNYNV 158 (271)
T ss_pred Hh-CCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc--CceEEEEcCCCccccCCccch
Confidence 98 899999999998653 35678899999999999999999999999999974 489999999999888888999
Q ss_pred hhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCC
Q 024752 163 YASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS 242 (263)
Q Consensus 163 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~ 242 (263)
|+++|+|+.+|+++++.|++++|||||+|+||+++|++........ ..........|++++.+|+|++++++||+++
T Consensus 159 Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~---~~~~~~~~~~p~~r~~~peeva~~~~fL~s~ 235 (271)
T PRK06505 159 MGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDAR---AIFSYQQRNSPLRRTVTIDEVGGSALYLLSD 235 (271)
T ss_pred hhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchH---HHHHHHhhcCCccccCCHHHHHHHHHHHhCc
Confidence 9999999999999999999999999999999999999854321111 1112233456888999999999999999999
Q ss_pred CCCCccCcEEEeCCCccccC
Q 024752 243 ATSYVTGQVICVDGGYSVTG 262 (263)
Q Consensus 243 ~~~~~~G~~i~~dgG~~~~~ 262 (263)
.+.++||+.|.+|||+.+..
T Consensus 236 ~~~~itG~~i~vdgG~~~~~ 255 (271)
T PRK06505 236 LSSGVTGEIHFVDSGYNIVS 255 (271)
T ss_pred cccccCceEEeecCCcccCC
Confidence 99999999999999987654
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-48 Score=322.34 Aligned_cols=242 Identities=21% Similarity=0.284 Sum_probs=210.4
Q ss_pred CCCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 10 SLKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 10 ~~~~k~vlVtGas--~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
.+++|+++||||+ +|||+++|++|+++|++|++++|+. +.++..+++. +..+.++++|++++++++++++++.++
T Consensus 4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 80 (252)
T PRK06079 4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV--DEEDLLVECDVASDESIERAFATIKER 80 (252)
T ss_pred ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc--cCceeEEeCCCCCHHHHHHHHHHHHHH
Confidence 3679999999999 8999999999999999999999984 4444444443 235788999999999999999999998
Q ss_pred cCCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcch
Q 024752 88 FDGKLNILINNAGTFIP----KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIY 163 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y 163 (263)
+ +++|++|||||+..+ .++.+.+.++|++.+++|+.++++++++++|+|++ +|+||++||..+..+.+++..|
T Consensus 81 ~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~~~~~~Y 157 (252)
T PRK06079 81 V-GKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP--GASIVTLTYFGSERAIPNYNVM 157 (252)
T ss_pred h-CCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc--CceEEEEeccCccccCCcchhh
Confidence 8 899999999998753 56778899999999999999999999999999965 5899999999998888889999
Q ss_pred hhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 164 ASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 164 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
+++|+|+++|+++++.|++++||+||+|+||+|+|++.......+. .........|.+++.+|+||++++.||+++.
T Consensus 158 ~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~---~~~~~~~~~p~~r~~~pedva~~~~~l~s~~ 234 (252)
T PRK06079 158 GIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKD---LLKESDSRTVDGVGVTIEEVGNTAAFLLSDL 234 (252)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHH---HHHHHHhcCcccCCCCHHHHHHHHHHHhCcc
Confidence 9999999999999999999999999999999999998644322111 1233445678899999999999999999999
Q ss_pred CCCccCcEEEeCCCccc
Q 024752 244 TSYVTGQVICVDGGYSV 260 (263)
Q Consensus 244 ~~~~~G~~i~~dgG~~~ 260 (263)
+.+++|+.+.+|||+++
T Consensus 235 ~~~itG~~i~vdgg~~~ 251 (252)
T PRK06079 235 STGVTGDIIYVDKGVHL 251 (252)
T ss_pred cccccccEEEeCCceec
Confidence 99999999999999864
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-48 Score=322.12 Aligned_cols=251 Identities=21% Similarity=0.332 Sum_probs=213.3
Q ss_pred ccccCCCCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHH
Q 024752 5 REQRWSLKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLME 82 (263)
Q Consensus 5 ~~~~~~~~~k~vlVtGas--~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 82 (263)
+.+.++++||+++||||+ +|||+++|++|+++|++|++++|+.+..+ ..+++.+....+.++++|++++++++++++
T Consensus 2 ~~~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 80 (258)
T PRK07533 2 MQPLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARP-YVEPLAEELDAPIFLPLDVREPGQLEAVFA 80 (258)
T ss_pred CCcccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHH-HHHHHHHhhccceEEecCcCCHHHHHHHHH
Confidence 356788999999999998 59999999999999999999999865322 223332221235678999999999999999
Q ss_pred HHHhhcCCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCC
Q 024752 83 TVSSQFDGKLNILINNAGTFIP----KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIP 158 (263)
Q Consensus 83 ~~~~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~ 158 (263)
++.+++ +++|++|||||+... .++.+.+.++|++.|++|+.++++++++++|.|++ +|+||++||..+..+.+
T Consensus 81 ~~~~~~-g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~--~g~Ii~iss~~~~~~~~ 157 (258)
T PRK07533 81 RIAEEW-GRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN--GGSLLTMSYYGAEKVVE 157 (258)
T ss_pred HHHHHc-CCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc--CCEEEEEeccccccCCc
Confidence 999998 899999999998643 45677899999999999999999999999999964 58999999998888888
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHH
Q 024752 159 MCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAF 238 (263)
Q Consensus 159 ~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ 238 (263)
.+..|+++|+|+.+|+++++.|++++||+||+|+||+++|++.......+ +.........|.+++.+|+|+++.++|
T Consensus 158 ~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~p~~r~~~p~dva~~~~~ 234 (258)
T PRK07533 158 NYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFD---ALLEDAAERAPLRRLVDIDDVGAVAAF 234 (258)
T ss_pred cchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcH---HHHHHHHhcCCcCCCCCHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999865432111 112334456788999999999999999
Q ss_pred HcCCCCCCccCcEEEeCCCccccC
Q 024752 239 LCLSATSYVTGQVICVDGGYSVTG 262 (263)
Q Consensus 239 l~s~~~~~~~G~~i~~dgG~~~~~ 262 (263)
|+++.+.++||+.+.+|||+.+.|
T Consensus 235 L~s~~~~~itG~~i~vdgg~~~~~ 258 (258)
T PRK07533 235 LASDAARRLTGNTLYIDGGYHIVG 258 (258)
T ss_pred HhChhhccccCcEEeeCCcccccC
Confidence 999999999999999999998755
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-48 Score=321.76 Aligned_cols=244 Identities=21% Similarity=0.319 Sum_probs=209.0
Q ss_pred CCCCEEEEecCCC--chHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc-CCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 11 LKGMTALVTGGTK--GIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 11 ~~~k~vlVtGas~--giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
+++|+++||||++ |||+++|++|+++|++|++.+|+. ..++..+++.+. +. ...+++|++++++++++++++.++
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~-~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGC-NFVSELDVTNPKSISNLFDDIKEK 83 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCC-ceEEEccCCCHHHHHHHHHHHHHH
Confidence 5789999999998 999999999999999999999884 344445555433 33 346789999999999999999999
Q ss_pred cCCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcch
Q 024752 88 FDGKLNILINNAGTFIP----KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIY 163 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y 163 (263)
+ +++|++|||||+... .++.+.+.++|++.+++|+.+++.+++++.|.|++ +|+||++||..+..+.++...|
T Consensus 84 ~-g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y 160 (260)
T PRK06603 84 W-GSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD--GGSIVTLTYYGAEKVIPNYNVM 160 (260)
T ss_pred c-CCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CceEEEEecCccccCCCcccch
Confidence 8 899999999997642 45678899999999999999999999999999964 5899999999988888889999
Q ss_pred hhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 164 ASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 164 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
++||+|+++|+++++.|++++||+||+|+||+++|++....... .+.........|++++..|+|++++++||+++.
T Consensus 161 ~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~ 237 (260)
T PRK06603 161 GVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDF---STMLKSHAATAPLKRNTTQEDVGGAAVYLFSEL 237 (260)
T ss_pred hhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCc---HHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCcc
Confidence 99999999999999999999999999999999999975432111 111233444678999999999999999999999
Q ss_pred CCCccCcEEEeCCCccccC
Q 024752 244 TSYVTGQVICVDGGYSVTG 262 (263)
Q Consensus 244 ~~~~~G~~i~~dgG~~~~~ 262 (263)
+.++||+.|.+|||+.+.|
T Consensus 238 ~~~itG~~i~vdgG~~~~~ 256 (260)
T PRK06603 238 SKGVTGEIHYVDCGYNIMG 256 (260)
T ss_pred cccCcceEEEeCCcccccC
Confidence 9999999999999998765
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-47 Score=319.81 Aligned_cols=245 Identities=32% Similarity=0.492 Sum_probs=218.3
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++..+.+|++++++++++++++.+.+
T Consensus 5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T PRK05867 5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAEL 84 (253)
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 56889999999999999999999999999999999999999988888887767778889999999999999999999998
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccccccC-C-CCcchhh
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVIAI-P-MCSIYAS 165 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~-~-~~~~Y~~ 165 (263)
+++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|.|.+++ +++||++||..+.... + ....|++
T Consensus 85 -g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~a 163 (253)
T PRK05867 85 -GGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCA 163 (253)
T ss_pred -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchHH
Confidence 8999999999998777778889999999999999999999999999998764 5799999998876432 3 4578999
Q ss_pred HHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCC
Q 024752 166 SKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245 (263)
Q Consensus 166 sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~ 245 (263)
+|+|+++++++++.|++++||+||+|+||+++|++..... .. ...+....|.+++.+|+||++++.||+++.+.
T Consensus 164 sKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~---~~---~~~~~~~~~~~r~~~p~~va~~~~~L~s~~~~ 237 (253)
T PRK05867 164 SKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYT---EY---QPLWEPKIPLGRLGRPEELAGLYLYLASEASS 237 (253)
T ss_pred HHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccch---HH---HHHHHhcCCCCCCcCHHHHHHHHHHHcCcccC
Confidence 9999999999999999999999999999999999865432 11 12334457889999999999999999999999
Q ss_pred CccCcEEEeCCCccc
Q 024752 246 YVTGQVICVDGGYSV 260 (263)
Q Consensus 246 ~~~G~~i~~dgG~~~ 260 (263)
++|||.|.+|||++.
T Consensus 238 ~~tG~~i~vdgG~~~ 252 (253)
T PRK05867 238 YMTGSDIVIDGGYTC 252 (253)
T ss_pred CcCCCeEEECCCccC
Confidence 999999999999864
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-47 Score=319.57 Aligned_cols=255 Identities=42% Similarity=0.569 Sum_probs=221.8
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcC---CceEEEeccCCCHHHHHHHHHH
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG---LQVSGSVCDLKIRAQREKLMET 83 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~ 83 (263)
+.+.++||+++|||+++|||+++|++|++.|++|++++|+++.+++..+++...+ .++..+.||+++++++++++++
T Consensus 2 ~~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~ 81 (270)
T KOG0725|consen 2 SGGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEF 81 (270)
T ss_pred CCccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHH
Confidence 4577999999999999999999999999999999999999999999998887643 4599999999999999999999
Q ss_pred HHhhcCCCccEEEeCCCCCCCC-CCCCCCHHHHHHHHHhhhHh-HHHHHHHHhHHHhhCCCceEEEEccccccccCCCC-
Q 024752 84 VSSQFDGKLNILINNAGTFIPK-ETTEFTEEDFSTVMTTNFES-AYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMC- 160 (263)
Q Consensus 84 ~~~~~~~~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~n~~~-~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~- 160 (263)
..+++.|++|++|||||..... ++.+.+.|+|++.+++|+.| .+.+.+.+.+++++++++.|+++||..+..+.++.
T Consensus 82 ~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~ 161 (270)
T KOG0725|consen 82 AVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSG 161 (270)
T ss_pred HHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCc
Confidence 9999448999999999998875 68899999999999999995 67777778888888788999999999988776555
Q ss_pred cchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHH-HH--hHhcCCCCCCCChhhHHHHHH
Q 024752 161 SIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHA-NR--MVLRTPMLRPGEPNEVSSVVA 237 (263)
Q Consensus 161 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~va~~~~ 237 (263)
.+|+++|+|+++|+|++|.|+.++|||||+|+||.+.|++ ..........++. .. .....|.++.+.|+|+++.+.
T Consensus 162 ~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~-~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~~eva~~~~ 240 (270)
T KOG0725|consen 162 VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSL-RAAGLDDGEMEEFKEATDSKGAVPLGRVGTPEEVAEAAA 240 (270)
T ss_pred ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCc-cccccccchhhHHhhhhccccccccCCccCHHHHHHhHH
Confidence 7999999999999999999999999999999999999998 2222121111111 21 334568999999999999999
Q ss_pred HHcCCCCCCccCcEEEeCCCccccC
Q 024752 238 FLCLSATSYVTGQVICVDGGYSVTG 262 (263)
Q Consensus 238 ~l~s~~~~~~~G~~i~~dgG~~~~~ 262 (263)
||++++++|++||.|.+|||.++.+
T Consensus 241 fla~~~asyitG~~i~vdgG~~~~~ 265 (270)
T KOG0725|consen 241 FLASDDASYITGQTIIVDGGFTVVG 265 (270)
T ss_pred hhcCcccccccCCEEEEeCCEEeec
Confidence 9999987799999999999999865
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-47 Score=319.32 Aligned_cols=244 Identities=22% Similarity=0.320 Sum_probs=208.3
Q ss_pred CCCCEEEEecC--CCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 11 LKGMTALVTGG--TKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 11 ~~~k~vlVtGa--s~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
+++|+++|||| ++|||+++|++|+++|++|++.+|+. +.++..+++.........+++|++++++++++++++.+++
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 82 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHW 82 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHh
Confidence 68999999997 67999999999999999999988863 3444555554433345678999999999999999999998
Q ss_pred CCCccEEEeCCCCCCCC----C-CCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcch
Q 024752 89 DGKLNILINNAGTFIPK----E-TTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIY 163 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~----~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y 163 (263)
+++|++|||||+.... + +.+.+.++|++.+++|+.++++++++++|.|+++ +|+||++||..+..+.|++..|
T Consensus 83 -g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-~g~Iv~iss~~~~~~~~~~~~Y 160 (261)
T PRK08690 83 -DGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR-NSAIVALSYLGAVRAIPNYNVM 160 (261)
T ss_pred -CCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-CcEEEEEcccccccCCCCcccc
Confidence 8999999999987542 2 3457889999999999999999999999999765 4899999999998888899999
Q ss_pred hhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 164 ASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 164 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
+++|+|+++|+++++.|++++||+||+|+||+++|++........ +....+....|++++..|+||++++.||+++.
T Consensus 161 ~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~---~~~~~~~~~~p~~r~~~peevA~~v~~l~s~~ 237 (261)
T PRK08690 161 GMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFG---KLLGHVAAHNPLRRNVTIEEVGNTAAFLLSDL 237 (261)
T ss_pred hhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchH---HHHHHHhhcCCCCCCCCHHHHHHHHHHHhCcc
Confidence 999999999999999999999999999999999999865432111 11233445678999999999999999999999
Q ss_pred CCCccCcEEEeCCCccc
Q 024752 244 TSYVTGQVICVDGGYSV 260 (263)
Q Consensus 244 ~~~~~G~~i~~dgG~~~ 260 (263)
+.++||+.|.+|||+.+
T Consensus 238 ~~~~tG~~i~vdgG~~~ 254 (261)
T PRK08690 238 SSGITGEITYVDGGYSI 254 (261)
T ss_pred cCCcceeEEEEcCCccc
Confidence 99999999999999875
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-47 Score=323.72 Aligned_cols=250 Identities=24% Similarity=0.293 Sum_probs=212.6
Q ss_pred ccCCCCCCEEEEecC--CCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc----------CC---ceEEEeccC
Q 024752 7 QRWSLKGMTALVTGG--TKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK----------GL---QVSGSVCDL 71 (263)
Q Consensus 7 ~~~~~~~k~vlVtGa--s~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~----------~~---~~~~~~~D~ 71 (263)
.+++++||++||||+ ++|||+++|+.|+++|++|++ +|+.+.++++..++... +. ....+.+|+
T Consensus 3 ~~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 81 (303)
T PLN02730 3 LPIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDA 81 (303)
T ss_pred CCcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecce
Confidence 467899999999999 899999999999999999998 88888888887666531 11 145678898
Q ss_pred --CC------------------HHHHHHHHHHHHhhcCCCccEEEeCCCCCC--CCCCCCCCHHHHHHHHHhhhHhHHHH
Q 024752 72 --KI------------------RAQREKLMETVSSQFDGKLNILINNAGTFI--PKETTEFTEEDFSTVMTTNFESAYHL 129 (263)
Q Consensus 72 --~~------------------~~~~~~~~~~~~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~ 129 (263)
++ +++++++++++.+++ +++|+||||||... ..++.+.+.++|+++|++|+.+++.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~-G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l 160 (303)
T PLN02730 82 VFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADF-GSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSL 160 (303)
T ss_pred ecCccccCchhhhcccccccCCHHHHHHHHHHHHHHc-CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHH
Confidence 33 448999999999998 89999999998653 36788899999999999999999999
Q ss_pred HHHHhHHHhhCCCceEEEEccccccccCCCC-cchhhHHHHHHHHHHHHHHHHcc-CCcEEEEEecCcccCCcccccccc
Q 024752 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMC-SIYASSKVAMNQLTKNLACEWAK-DKIRVNTVAPWVIRTPLLDTVEKD 207 (263)
Q Consensus 130 ~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~-~~Y~~sK~a~~~~~~~~a~e~~~-~gi~v~~v~PG~v~t~~~~~~~~~ 207 (263)
+++++|.|++ .|+||++||..+..+.|+. ..|++||+|+++|+++++.|+++ +|||||+|+||+++|++.......
T Consensus 161 ~~~~~p~m~~--~G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~~ 238 (303)
T PLN02730 161 LQHFGPIMNP--GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGFI 238 (303)
T ss_pred HHHHHHHHhc--CCEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhccccc
Confidence 9999999976 3899999999998888765 47999999999999999999986 799999999999999987643211
Q ss_pred chhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCccccCC
Q 024752 208 SNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVTGF 263 (263)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~ 263 (263)
+ +.........|+.++..|+|++++++||+++.+.+++|+.+.+|||++..|+
T Consensus 239 ~---~~~~~~~~~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~~~~g~ 291 (303)
T PLN02730 239 D---DMIEYSYANAPLQKELTADEVGNAAAFLASPLASAITGATIYVDNGLNAMGL 291 (303)
T ss_pred H---HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCcccccc
Confidence 1 1112223445778889999999999999999999999999999999999885
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-47 Score=303.38 Aligned_cols=227 Identities=27% Similarity=0.365 Sum_probs=205.8
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
.+++|+++|||||+|||.++|++|++.|++|++++|+.++++++++++.+ ..+.++..|++|++++++++..+.++|
T Consensus 3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~--~~~~~~~~DVtD~~~~~~~i~~~~~~~- 79 (246)
T COG4221 3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA--GAALALALDVTDRAAVEAAIEALPEEF- 79 (246)
T ss_pred CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc--CceEEEeeccCCHHHHHHHHHHHHHhh-
Confidence 45789999999999999999999999999999999999999999999865 568999999999999999999999999
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
+++|+||||||.....++.+.+.++|++++++|+.|.++.+++++|.|.+++.|+||++||+++..++|+...|+++|++
T Consensus 80 g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~a 159 (246)
T COG4221 80 GRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAA 159 (246)
T ss_pred CcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHHH
Confidence 89999999999998889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 170 MNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
+..|++.|+.|+..++|||.+|+||.+.|..++......+.. +..+........+|+|+|+++.|.++..
T Consensus 160 V~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~----~~~~~y~~~~~l~p~dIA~~V~~~~~~P 229 (246)
T COG4221 160 VRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDE----RADKVYKGGTALTPEDIAEAVLFAATQP 229 (246)
T ss_pred HHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhh----hHHHHhccCCCCCHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999988887765553221 2222223445678999999999988743
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-47 Score=315.19 Aligned_cols=249 Identities=31% Similarity=0.457 Sum_probs=221.3
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
|++++|+++||||++|||++++++|+++|++|++++|++++++++.+++...+.++.++.+|++++++++++++++.+++
T Consensus 2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (254)
T PRK07478 2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERF 81 (254)
T ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 46789999999999999999999999999999999999999888888887777778899999999999999999999998
Q ss_pred CCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccc-ccCCCCcchhhH
Q 024752 89 DGKLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGV-IAIPMCSIYASS 166 (263)
Q Consensus 89 ~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~-~~~~~~~~Y~~s 166 (263)
+++|++|||||+... .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+. .+.++...|++|
T Consensus 82 -~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~s 160 (254)
T PRK07478 82 -GGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAAS 160 (254)
T ss_pred -CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhHHH
Confidence 799999999998643 56778899999999999999999999999999998888999999998886 567888999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
|++++.++++++.|+.++||+|++|+||+++|++........... .......|.++..+|+|+++.++||+++.+.+
T Consensus 161 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 237 (254)
T PRK07478 161 KAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEAL---AFVAGLHALKRMAQPEEIAQAALFLASDAASF 237 (254)
T ss_pred HHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHH---HHHHhcCCCCCCcCHHHHHHHHHHHcCchhcC
Confidence 999999999999999999999999999999999876543222211 22334457888899999999999999999999
Q ss_pred ccCcEEEeCCCcccc
Q 024752 247 VTGQVICVDGGYSVT 261 (263)
Q Consensus 247 ~~G~~i~~dgG~~~~ 261 (263)
++|+.|.+|||+.+.
T Consensus 238 ~~G~~~~~dgg~~~~ 252 (254)
T PRK07478 238 VTGTALLVDGGVSIT 252 (254)
T ss_pred CCCCeEEeCCchhcc
Confidence 999999999998754
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-47 Score=314.97 Aligned_cols=248 Identities=28% Similarity=0.421 Sum_probs=219.6
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCch-hHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET-ELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
.+++++|+++|||+++|||+++|++|+++|++|++++|+.+ .+++..+++...+.++..+.+|+++++++.++++++.+
T Consensus 3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~ 82 (254)
T PRK06114 3 LFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEA 82 (254)
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999764 45667777766667788899999999999999999999
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCC--Ccchh
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPM--CSIYA 164 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~--~~~Y~ 164 (263)
.+ +++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++ ...|+
T Consensus 83 ~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~ 161 (254)
T PRK06114 83 EL-GALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYN 161 (254)
T ss_pred Hc-CCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcchHH
Confidence 98 8999999999998777788889999999999999999999999999998887899999999998876554 67899
Q ss_pred hHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCC
Q 024752 165 SSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244 (263)
Q Consensus 165 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~ 244 (263)
++|+|+++++++++.|+.++||+||+|+||+++|++..... ..+....+....|+++..+|+|+++.++||+++.+
T Consensus 162 ~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~----~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~ 237 (254)
T PRK06114 162 ASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPE----MVHQTKLFEEQTPMQRMAKVDEMVGPAVFLLSDAA 237 (254)
T ss_pred HHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCccccccc----chHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence 99999999999999999999999999999999999864311 11112344557799999999999999999999999
Q ss_pred CCccCcEEEeCCCccc
Q 024752 245 SYVTGQVICVDGGYSV 260 (263)
Q Consensus 245 ~~~~G~~i~~dgG~~~ 260 (263)
+++||++|.+|||+..
T Consensus 238 ~~~tG~~i~~dgg~~~ 253 (254)
T PRK06114 238 SFCTGVDLLVDGGFVC 253 (254)
T ss_pred cCcCCceEEECcCEec
Confidence 9999999999999753
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-46 Score=315.62 Aligned_cols=253 Identities=26% Similarity=0.417 Sum_probs=222.6
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc--CCceEEEeccCCCHHHHHHHHHHHH
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
..++++|+++||||++|||++++++|+++|++|++++|+++++++..+++... +.++.++.+|+++++++.++++++.
T Consensus 3 ~~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 82 (265)
T PRK07062 3 QIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVE 82 (265)
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence 35789999999999999999999999999999999999999888888777654 3468889999999999999999999
Q ss_pred hhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhh
Q 024752 86 SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYAS 165 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~ 165 (263)
+.+ +++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|++
T Consensus 83 ~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~a 161 (265)
T PRK07062 83 ARF-GGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSA 161 (265)
T ss_pred Hhc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHhHH
Confidence 988 8899999999998777788889999999999999999999999999999887899999999999988888999999
Q ss_pred HHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccc-----cchhHHHHHHh--HhcCCCCCCCChhhHHHHHHH
Q 024752 166 SKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEK-----DSNFLEHANRM--VLRTPMLRPGEPNEVSSVVAF 238 (263)
Q Consensus 166 sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~-----~~~~~~~~~~~--~~~~~~~~~~~~~~va~~~~~ 238 (263)
+|+++.+++++++.|+.++||+||+|+||+++|++...... ...+.+..... ....|++++.+|+|+++++.|
T Consensus 162 sKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~ 241 (265)
T PRK07062 162 ARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAARALFF 241 (265)
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999998643211 11121111111 245788999999999999999
Q ss_pred HcCCCCCCccCcEEEeCCCcccc
Q 024752 239 LCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 239 l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
|+++.+.++||+.|.+|||++.+
T Consensus 242 L~s~~~~~~tG~~i~vdgg~~~~ 264 (265)
T PRK07062 242 LASPLSSYTTGSHIDVSGGFARH 264 (265)
T ss_pred HhCchhcccccceEEEcCceEee
Confidence 99998999999999999998764
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-46 Score=313.12 Aligned_cols=249 Identities=28% Similarity=0.479 Sum_probs=224.7
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
-+++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++...+.++..+.+|++++++++++++++.+.
T Consensus 4 ~~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (254)
T PRK08085 4 LFSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKD 83 (254)
T ss_pred cccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHh
Confidence 46789999999999999999999999999999999999999888888888766667888999999999999999999998
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+ +++|++|||||.....++.+.+.++|++.+++|+.+++.+++++++.|.+++.++||++||..+..+.++...|+++|
T Consensus 84 ~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK 162 (254)
T PRK08085 84 I-GPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASK 162 (254)
T ss_pred c-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcchHHHH
Confidence 8 899999999998777778888999999999999999999999999999887779999999999888888899999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
++++.++++++.|++++||++|+|+||+++|++.......+.. ........|++++++|+|+++++.||+++.++++
T Consensus 163 ~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~---~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~~~i 239 (254)
T PRK08085 163 GAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAF---TAWLCKRTPAARWGDPQELIGAAVFLSSKASDFV 239 (254)
T ss_pred HHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHH---HHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCC
Confidence 9999999999999999999999999999999987653322222 2334456789999999999999999999999999
Q ss_pred cCcEEEeCCCccc
Q 024752 248 TGQVICVDGGYSV 260 (263)
Q Consensus 248 ~G~~i~~dgG~~~ 260 (263)
||+.|.+|||+..
T Consensus 240 ~G~~i~~dgg~~~ 252 (254)
T PRK08085 240 NGHLLFVDGGMLV 252 (254)
T ss_pred cCCEEEECCCeee
Confidence 9999999999764
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-47 Score=317.36 Aligned_cols=246 Identities=22% Similarity=0.335 Sum_probs=207.1
Q ss_pred CCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 11 LKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 11 ~~~k~vlVtGas--~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
+++|+++||||+ +|||+++|++|+++|++|++++|+.. ..+..+++.+.-.....+++|++++++++++++++.+++
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 86 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW 86 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence 578999999997 89999999999999999999988742 223333333221235678999999999999999999988
Q ss_pred CCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchh
Q 024752 89 DGKLNILINNAGTFIP----KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYA 164 (263)
Q Consensus 89 ~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~ 164 (263)
+++|++|||||+... .++.+.+.++|++.|++|+.+++.++++++|.|++ +|+||++||..+..+.|++..|+
T Consensus 87 -g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~p~~~~Y~ 163 (272)
T PRK08159 87 -GKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD--GGSILTLTYYGAEKVMPHYNVMG 163 (272)
T ss_pred -CCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CceEEEEeccccccCCCcchhhh
Confidence 899999999998653 45678899999999999999999999999999964 58999999998888888999999
Q ss_pred hHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCC
Q 024752 165 SSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244 (263)
Q Consensus 165 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~ 244 (263)
+||+|+.+|+++++.|++++||+||+|+||+++|++...... ............|++++..|+|++++++||+++.+
T Consensus 164 asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~p~~r~~~peevA~~~~~L~s~~~ 240 (272)
T PRK08159 164 VAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGD---FRYILKWNEYNAPLRRTVTIEEVGDSALYLLSDLS 240 (272)
T ss_pred hHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCc---chHHHHHHHhCCcccccCCHHHHHHHHHHHhCccc
Confidence 999999999999999999999999999999999987543211 11111222235688899999999999999999999
Q ss_pred CCccCcEEEeCCCccccCC
Q 024752 245 SYVTGQVICVDGGYSVTGF 263 (263)
Q Consensus 245 ~~~~G~~i~~dgG~~~~~~ 263 (263)
.++||+.|.+|||+.+.+|
T Consensus 241 ~~itG~~i~vdgG~~~~~~ 259 (272)
T PRK08159 241 RGVTGEVHHVDSGYHVVGM 259 (272)
T ss_pred cCccceEEEECCCceeecc
Confidence 9999999999999987654
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-46 Score=313.43 Aligned_cols=256 Identities=33% Similarity=0.510 Sum_probs=226.9
Q ss_pred CcccccccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHH
Q 024752 1 MSDFREQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKL 80 (263)
Q Consensus 1 ~~~~~~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 80 (263)
|-|+....+++++|++|||||++|||++++++|+++|++|++++|+ +..++..+++...+.++.++.+|+++++++.++
T Consensus 3 ~~~~~~~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~ 81 (258)
T PRK06935 3 LDKFSMDFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKV 81 (258)
T ss_pred hhhhccccccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence 4466677788999999999999999999999999999999999998 556666666666566788999999999999999
Q ss_pred HHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCC
Q 024752 81 METVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMC 160 (263)
Q Consensus 81 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~ 160 (263)
++++.+.+ +++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.+..
T Consensus 82 ~~~~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~ 160 (258)
T PRK06935 82 VKEALEEF-GKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFV 160 (258)
T ss_pred HHHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCc
Confidence 99999998 89999999999887777788899999999999999999999999999998888999999999998888888
Q ss_pred cchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHc
Q 024752 161 SIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC 240 (263)
Q Consensus 161 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~ 240 (263)
..|+++|+++++++++++.|+.++||+||.|+||+++|++.......+.. ........|.+++.+|+|+++.+.||+
T Consensus 161 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~dva~~~~~l~ 237 (258)
T PRK06935 161 PAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNR---NDEILKRIPAGRWGEPDDLMGAAVFLA 237 (258)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHH---HHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999986543322211 133444678899999999999999999
Q ss_pred CCCCCCccCcEEEeCCCcccc
Q 024752 241 LSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 241 s~~~~~~~G~~i~~dgG~~~~ 261 (263)
++.+++++|++|.+|||..++
T Consensus 238 s~~~~~~~G~~i~~dgg~~~~ 258 (258)
T PRK06935 238 SRASDYVNGHILAVDGGWLVR 258 (258)
T ss_pred ChhhcCCCCCEEEECCCeecC
Confidence 999999999999999998764
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-46 Score=314.10 Aligned_cols=246 Identities=24% Similarity=0.298 Sum_probs=210.3
Q ss_pred CCCCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEeeCCc---hhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHH
Q 024752 9 WSLKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRNE---TELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMET 83 (263)
Q Consensus 9 ~~~~~k~vlVtGas--~giG~~~a~~l~~~g~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 83 (263)
+++++|+++||||+ +|||+++|++|+++|++|++++|+. +.++++.+++. +.++.++++|++|++++++++++
T Consensus 3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~ 80 (257)
T PRK08594 3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE--GQESLLLPCDVTSDEEITACFET 80 (257)
T ss_pred cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC--CCceEEEecCCCCHHHHHHHHHH
Confidence 46789999999997 8999999999999999999998764 33344443332 45688899999999999999999
Q ss_pred HHhhcCCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCC
Q 024752 84 VSSQFDGKLNILINNAGTFIP----KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPM 159 (263)
Q Consensus 84 ~~~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~ 159 (263)
+.+++ +++|++|||||+... .++.+.+.++|++.+++|+.+++.++++++|.|.+ +|+||++||..+..+.+.
T Consensus 81 ~~~~~-g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~~~~~~~ 157 (257)
T PRK08594 81 IKEEV-GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE--GGSIVTLTYLGGERVVQN 157 (257)
T ss_pred HHHhC-CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc--CceEEEEcccCCccCCCC
Confidence 99998 899999999998642 45677899999999999999999999999999965 589999999999888888
Q ss_pred CcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHH
Q 024752 160 CSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFL 239 (263)
Q Consensus 160 ~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l 239 (263)
...|++||+|+++|+++++.|++++||+||+|+||+++|++.......+ +.........|++++.+|+|++++++||
T Consensus 158 ~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~p~~r~~~p~~va~~~~~l 234 (257)
T PRK08594 158 YNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFN---SILKEIEERAPLRRTTTQEEVGDTAAFL 234 (257)
T ss_pred CchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhcccc---HHHHHHhhcCCccccCCHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999754321111 1112334456888999999999999999
Q ss_pred cCCCCCCccCcEEEeCCCccccC
Q 024752 240 CLSATSYVTGQVICVDGGYSVTG 262 (263)
Q Consensus 240 ~s~~~~~~~G~~i~~dgG~~~~~ 262 (263)
+++.++++||+.+.+|||+.+-|
T Consensus 235 ~s~~~~~~tG~~~~~dgg~~~~~ 257 (257)
T PRK08594 235 FSDLSRGVTGENIHVDSGYHIIG 257 (257)
T ss_pred cCcccccccceEEEECCchhccC
Confidence 99999999999999999987643
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-46 Score=313.40 Aligned_cols=243 Identities=21% Similarity=0.333 Sum_probs=207.7
Q ss_pred CCCCEEEEecCCC--chHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 11 LKGMTALVTGGTK--GIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 11 ~~~k~vlVtGas~--giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
+++|+++||||++ |||+++|++|+++|++|++.+|+ ++.++..+++......+..+.+|++++++++++++++.+++
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 82 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW 82 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc
Confidence 6899999999986 99999999999999999999998 34455566665544456778999999999999999999988
Q ss_pred CCCccEEEeCCCCCCCCC-----CCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcch
Q 024752 89 DGKLNILINNAGTFIPKE-----TTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIY 163 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~-----~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y 163 (263)
+++|++|||||+....+ +.+.+.++|++.+++|+.+++.+.+++.|.|++ +|+||++||..+..+.+++..|
T Consensus 83 -g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~iss~~~~~~~~~~~~Y 159 (262)
T PRK07984 83 -PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVM 159 (262)
T ss_pred -CCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcC--CcEEEEEecCCCCCCCCCcchh
Confidence 89999999999864322 456789999999999999999999999997653 4899999999988888889999
Q ss_pred hhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 164 ASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 164 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
++||+|+++|+++++.|++++||+||+|+||+++|++...... ..+.........|.+++..|+||++++.||+++.
T Consensus 160 ~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~---~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~ 236 (262)
T PRK07984 160 GLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKD---FRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDL 236 (262)
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCc---hHHHHHHHHHcCCCcCCCCHHHHHHHHHHHcCcc
Confidence 9999999999999999999999999999999999987543211 1111233344678899999999999999999999
Q ss_pred CCCccCcEEEeCCCccc
Q 024752 244 TSYVTGQVICVDGGYSV 260 (263)
Q Consensus 244 ~~~~~G~~i~~dgG~~~ 260 (263)
+.+++|+.|.+|||+.+
T Consensus 237 ~~~itG~~i~vdgg~~~ 253 (262)
T PRK07984 237 SAGISGEVVHVDGGFSI 253 (262)
T ss_pred cccccCcEEEECCCccc
Confidence 99999999999999764
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-46 Score=313.23 Aligned_cols=247 Identities=31% Similarity=0.479 Sum_probs=216.8
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
+++|++|||||++|||+++++.|+++|++|++++|+ +.+++..+++.+.+.++.++.+|+++++++.++++++.+.+ +
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g 81 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQF-G 81 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHc-C
Confidence 679999999999999999999999999999999999 77788888887666778999999999999999999999998 8
Q ss_pred CccEEEeCCCCCCC-CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHH
Q 024752 91 KLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 91 ~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
++|++|||||+... .++.+.+.+.|++.+++|+.+++.++++++|.|++++ |+||++||..+..+.++...|++||+|
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaa 160 (272)
T PRK08589 82 RVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNAAKGA 160 (272)
T ss_pred CcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCCCchHHHHHHH
Confidence 99999999998753 5677889999999999999999999999999998764 899999999999888888999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccch--hHH-HHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 170 MNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSN--FLE-HANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
++.|+++++.|+.++||+||+|+||+|+|++......... ... .........|.+++.+|+|+++.+.||+++.+++
T Consensus 161 l~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 240 (272)
T PRK08589 161 VINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDSSF 240 (272)
T ss_pred HHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHHHHHHHHHHHcCchhcC
Confidence 9999999999999999999999999999998765432111 110 0111222468888999999999999999999999
Q ss_pred ccCcEEEeCCCccc
Q 024752 247 VTGQVICVDGGYSV 260 (263)
Q Consensus 247 ~~G~~i~~dgG~~~ 260 (263)
++|+.|.+|||+..
T Consensus 241 ~~G~~i~vdgg~~~ 254 (272)
T PRK08589 241 ITGETIRIDGGVMA 254 (272)
T ss_pred cCCCEEEECCCccc
Confidence 99999999999753
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-46 Score=313.78 Aligned_cols=255 Identities=33% Similarity=0.433 Sum_probs=224.9
Q ss_pred ccccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHH
Q 024752 5 REQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 5 ~~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 84 (263)
+...+++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++...+.++.++++|+++++++.++++++
T Consensus 2 ~~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 81 (278)
T PRK08277 2 MPNLFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQI 81 (278)
T ss_pred CCceeccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence 45667899999999999999999999999999999999999998888888888766677889999999999999999999
Q ss_pred HhhcCCCccEEEeCCCCCCCC---------------CCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEc
Q 024752 85 SSQFDGKLNILINNAGTFIPK---------------ETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFIS 149 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~~~---------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vs 149 (263)
.+++ +++|++|||||...+. ++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++|
T Consensus 82 ~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~is 160 (278)
T PRK08277 82 LEDF-GPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINIS 160 (278)
T ss_pred HHHc-CCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEc
Confidence 9988 8999999999975432 35677899999999999999999999999999988789999999
Q ss_pred cccccccCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccc--hhHHHHHHhHhcCCCCCCC
Q 024752 150 SVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDS--NFLEHANRMVLRTPMLRPG 227 (263)
Q Consensus 150 S~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 227 (263)
|..+..+.++...|+++|+|++.++++++.|++++||+||+|+||+++|++........ ...+.........|++++.
T Consensus 161 S~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~ 240 (278)
T PRK08277 161 SMNAFTPLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMGRFG 240 (278)
T ss_pred cchhcCCCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCCccCCC
Confidence 99999998899999999999999999999999999999999999999999865432221 1112223445567899999
Q ss_pred ChhhHHHHHHHHcCC-CCCCccCcEEEeCCCccc
Q 024752 228 EPNEVSSVVAFLCLS-ATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 228 ~~~~va~~~~~l~s~-~~~~~~G~~i~~dgG~~~ 260 (263)
+|+|++++++||+++ .+.++||+.|.+|||++.
T Consensus 241 ~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG~~~ 274 (278)
T PRK08277 241 KPEELLGTLLWLADEKASSFVTGVVLPVDGGFSA 274 (278)
T ss_pred CHHHHHHHHHHHcCccccCCcCCCEEEECCCeec
Confidence 999999999999999 899999999999999753
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-46 Score=312.28 Aligned_cols=248 Identities=25% Similarity=0.370 Sum_probs=216.9
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeC-CchhHHHHHHHHHh-cCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-NETELNQRIQEWKS-KGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
.++++|+++||||++|||++++++|+++|++|++++| +++.++...+++.. .+.++.++++|++++++++++++++.+
T Consensus 4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (260)
T PRK08416 4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDE 83 (260)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 4688999999999999999999999999999988864 56666777767654 356789999999999999999999999
Q ss_pred hcCCCccEEEeCCCCCC------CCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCC
Q 024752 87 QFDGKLNILINNAGTFI------PKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMC 160 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~ 160 (263)
++ +++|++|||||+.. ..++.+.+.+++++.+++|+.+++.++++++|.|++++.|+||++||..+..+.+++
T Consensus 84 ~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~ 162 (260)
T PRK08416 84 DF-DRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENY 162 (260)
T ss_pred hc-CCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCCc
Confidence 98 89999999998753 245567788999999999999999999999999998778999999999988888899
Q ss_pred cchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHc
Q 024752 161 SIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC 240 (263)
Q Consensus 161 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~ 240 (263)
..|++||++++.++++++.|++++||+||+|+||+++|++.......... ...+....|.+++.+|+|++++++||+
T Consensus 163 ~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~---~~~~~~~~~~~r~~~p~~va~~~~~l~ 239 (260)
T PRK08416 163 AGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEV---KAKTEELSPLNRMGQPEDLAGACLFLC 239 (260)
T ss_pred ccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHH---HHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999986544322221 233445678889999999999999999
Q ss_pred CCCCCCccCcEEEeCCCccc
Q 024752 241 LSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 241 s~~~~~~~G~~i~~dgG~~~ 260 (263)
++.+.+++|+.+.+|||+++
T Consensus 240 ~~~~~~~~G~~i~vdgg~~~ 259 (260)
T PRK08416 240 SEKASWLTGQTIVVDGGTTF 259 (260)
T ss_pred ChhhhcccCcEEEEcCCeec
Confidence 99999999999999999865
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-46 Score=309.36 Aligned_cols=248 Identities=31% Similarity=0.463 Sum_probs=217.6
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
+.++++||+++|||+++|||++++++|++.|++|++++++.. ++..+++...+.++.++++|++++++++++++++.+
T Consensus 4 ~~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 81 (253)
T PRK08993 4 DAFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTALGRRFLSLTADLRKIDGIPALLERAVA 81 (253)
T ss_pred cccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 356799999999999999999999999999999998887643 344555555566788899999999999999999999
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccccccCCCCcchhh
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVIAIPMCSIYAS 165 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~ 165 (263)
++ +++|++|||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+..+.+....|++
T Consensus 82 ~~-~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~ 160 (253)
T PRK08993 82 EF-GHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTA 160 (253)
T ss_pred Hh-CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHH
Confidence 88 7999999999988777788889999999999999999999999999998764 589999999999888888899999
Q ss_pred HHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCC
Q 024752 166 SKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245 (263)
Q Consensus 166 sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~ 245 (263)
+|+|+++++++++.|+.++||+||.|+||+++|++.......... ........|.+++..|+|+++.+.||+++.+.
T Consensus 161 sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~---~~~~~~~~p~~r~~~p~eva~~~~~l~s~~~~ 237 (253)
T PRK08993 161 SKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQR---SAEILDRIPAGRWGLPSDLMGPVVFLASSASD 237 (253)
T ss_pred HHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHH---HHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence 999999999999999999999999999999999987644322211 12344567889999999999999999999999
Q ss_pred CccCcEEEeCCCccc
Q 024752 246 YVTGQVICVDGGYSV 260 (263)
Q Consensus 246 ~~~G~~i~~dgG~~~ 260 (263)
+++|+.+.+|||+..
T Consensus 238 ~~~G~~~~~dgg~~~ 252 (253)
T PRK08993 238 YINGYTIAVDGGWLA 252 (253)
T ss_pred CccCcEEEECCCEec
Confidence 999999999999865
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-46 Score=311.81 Aligned_cols=243 Identities=21% Similarity=0.278 Sum_probs=201.8
Q ss_pred CCCCEEEEecC--CCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 11 LKGMTALVTGG--TKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 11 ~~~k~vlVtGa--s~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
+++|+++|||| ++|||+++|++|+++|++|++++|.... ++..+++.+.......+++|++++++++++++++.+++
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 82 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRF-KDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHW 82 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHH-HHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHh
Confidence 67999999996 6899999999999999999998765222 22233332221223568899999999999999999998
Q ss_pred CCCccEEEeCCCCCCCC----C-CCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcch
Q 024752 89 DGKLNILINNAGTFIPK----E-TTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIY 163 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~----~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y 163 (263)
+++|++|||||+.... + +.+.+.++|++.|++|+.++++++++++|+|.+ .|+||++||..+..+.++...|
T Consensus 83 -g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~--~g~Ii~iss~~~~~~~~~~~~Y 159 (260)
T PRK06997 83 -DGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERVVPNYNTM 159 (260)
T ss_pred -CCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC--CceEEEEeccccccCCCCcchH
Confidence 8999999999986432 2 345788999999999999999999999999953 5899999999998888888999
Q ss_pred hhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 164 ASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 164 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
++||+|+.+|+++++.|++++||+||+|+||+++|++........ +.........|+++...|+||++++.||+++.
T Consensus 160 ~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~---~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~ 236 (260)
T PRK06997 160 GLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFG---KILDFVESNAPLRRNVTIEEVGNVAAFLLSDL 236 (260)
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchh---hHHHHHHhcCcccccCCHHHHHHHHHHHhCcc
Confidence 999999999999999999999999999999999998754321111 11123344568899999999999999999999
Q ss_pred CCCccCcEEEeCCCccc
Q 024752 244 TSYVTGQVICVDGGYSV 260 (263)
Q Consensus 244 ~~~~~G~~i~~dgG~~~ 260 (263)
+.++||+.|.+|||+..
T Consensus 237 ~~~itG~~i~vdgg~~~ 253 (260)
T PRK06997 237 ASGVTGEITHVDSGFNA 253 (260)
T ss_pred ccCcceeEEEEcCChhh
Confidence 99999999999999753
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-45 Score=307.52 Aligned_cols=250 Identities=32% Similarity=0.515 Sum_probs=225.8
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
.+++++|+++||||+++||++++++|+++|++|++++|++++.++..+++...+.++.++.+|++++++++++++++.+.
T Consensus 5 ~~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 84 (255)
T PRK07523 5 LFDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAE 84 (255)
T ss_pred ccCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence 34688999999999999999999999999999999999998888887777766677889999999999999999999998
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+ +++|++|||||.....++.+.+.++|++.+++|+.+++++++++.+.|.+++.++||++||..+..+.++...|+++|
T Consensus 85 ~-~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK 163 (255)
T PRK07523 85 I-GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATK 163 (255)
T ss_pred c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccHHHHH
Confidence 8 899999999999877788888999999999999999999999999999988789999999999888888999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
++++.++++++.|++++||+|++|+||+++|++........... .+.....|++++..|+|+++++.||+++.+.++
T Consensus 164 ~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~ 240 (255)
T PRK07523 164 GAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFS---AWLEKRTPAGRWGKVEELVGACVFLASDASSFV 240 (255)
T ss_pred HHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHH---HHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCc
Confidence 99999999999999999999999999999999875543322222 344556788999999999999999999999999
Q ss_pred cCcEEEeCCCcccc
Q 024752 248 TGQVICVDGGYSVT 261 (263)
Q Consensus 248 ~G~~i~~dgG~~~~ 261 (263)
+|+.|++|||...+
T Consensus 241 ~G~~i~~~gg~~~~ 254 (255)
T PRK07523 241 NGHVLYVDGGITAS 254 (255)
T ss_pred cCcEEEECCCeecc
Confidence 99999999998765
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-45 Score=305.51 Aligned_cols=245 Identities=35% Similarity=0.488 Sum_probs=213.2
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++ +.++.++++|+++++++.++++++.+.+
T Consensus 3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~- 78 (261)
T PRK08265 3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL---GERARFIATDITDDAAIERAVATVVARF- 78 (261)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCeeEEEEecCCCHHHHHHHHHHHHHHh-
Confidence 367999999999999999999999999999999999988777766554 4568889999999999999999999998
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
+++|++|||||......+ +.+.++|++.+++|+.+++.++++++|.|+ ++.|+||++||..+..+.++...|+++|++
T Consensus 79 g~id~lv~~ag~~~~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g~ii~isS~~~~~~~~~~~~Y~asKaa 156 (261)
T PRK08265 79 GRVDILVNLACTYLDDGL-ASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGGAIVNFTSISAKFAQTGRWLYPASKAA 156 (261)
T ss_pred CCCCEEEECCCCCCCCcC-cCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCcEEEEECchhhccCCCCCchhHHHHHH
Confidence 899999999998654433 568899999999999999999999999997 557899999999999998899999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHh-HhcCCCCCCCChhhHHHHHHHHcCCCCCCcc
Q 024752 170 MNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRM-VLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~ 248 (263)
++.++++++.|+.++||++|+|+||+++|++......... ...... ....|+++..+|+|+++++.||+++.+.+++
T Consensus 157 ~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~--~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~~~t 234 (261)
T PRK08265 157 IRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDR--AKADRVAAPFHLLGRVGDPEEVAQVVAFLCSDAASFVT 234 (261)
T ss_pred HHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccch--hHHHHhhcccCCCCCccCHHHHHHHHHHHcCccccCcc
Confidence 9999999999999999999999999999998754332111 111122 2245888999999999999999999999999
Q ss_pred CcEEEeCCCccccC
Q 024752 249 GQVICVDGGYSVTG 262 (263)
Q Consensus 249 G~~i~~dgG~~~~~ 262 (263)
|+.|.+|||+++.+
T Consensus 235 G~~i~vdgg~~~~~ 248 (261)
T PRK08265 235 GADYAVDGGYSALG 248 (261)
T ss_pred CcEEEECCCeeccC
Confidence 99999999987654
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-46 Score=309.53 Aligned_cols=233 Identities=40% Similarity=0.603 Sum_probs=209.8
Q ss_pred cCC--CchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc-CCceEEEeccCCCHHHHHHHHHHHHhhcCCCccEEE
Q 024752 20 GGT--KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILI 96 (263)
Q Consensus 20 Gas--~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~li 96 (263)
|++ +|||+++|++|+++|++|++++|+.+.+++..+++.+. +.+ .+.+|++++++++++++++.+.+++++|++|
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV 78 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE--VIQCDLSDEESVEALFDEAVERFGGRIDILV 78 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE--EEESCTTSHHHHHHHHHHHHHHHCSSESEEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc--eEeecCcchHHHHHHHHHHHhhcCCCeEEEE
Confidence 566 99999999999999999999999999877777776653 433 5999999999999999999999767999999
Q ss_pred eCCCCCCC----CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHHH
Q 024752 97 NNAGTFIP----KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQ 172 (263)
Q Consensus 97 ~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~ 172 (263)
||+|.... .++.+.+.++|++.+++|+.+++.+++++.|+|++ +|+||++||..+..+.+++..|+++|+|+++
T Consensus 79 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~gsii~iss~~~~~~~~~~~~y~~sKaal~~ 156 (241)
T PF13561_consen 79 NNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKK--GGSIINISSIAAQRPMPGYSAYSASKAALEG 156 (241)
T ss_dssp EEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHH--EEEEEEEEEGGGTSBSTTTHHHHHHHHHHHH
T ss_pred ecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCCcccccchhhcccCccchhhHHHHHHHHH
Confidence 99998876 67778899999999999999999999999998887 4899999999999999999999999999999
Q ss_pred HHHHHHHHHcc-CCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCcE
Q 024752 173 LTKNLACEWAK-DKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQV 251 (263)
Q Consensus 173 ~~~~~a~e~~~-~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~ 251 (263)
|+|+++.||++ +|||||+|+||+++|++.......+ +.........|+++..+|+|||+++.||+|+.++++|||+
T Consensus 157 l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~---~~~~~~~~~~pl~r~~~~~evA~~v~fL~s~~a~~itG~~ 233 (241)
T PF13561_consen 157 LTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNE---EFLEELKKRIPLGRLGTPEEVANAVLFLASDAASYITGQV 233 (241)
T ss_dssp HHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHH---HHHHHHHHHSTTSSHBEHHHHHHHHHHHHSGGGTTGTSEE
T ss_pred HHHHHHHHhccccCeeeeeecccceeccchhcccccc---chhhhhhhhhccCCCcCHHHHHHHHHHHhCccccCccCCe
Confidence 99999999999 9999999999999999865543322 2336667789999999999999999999999999999999
Q ss_pred EEeCCCcc
Q 024752 252 ICVDGGYS 259 (263)
Q Consensus 252 i~~dgG~~ 259 (263)
|.+|||++
T Consensus 234 i~vDGG~s 241 (241)
T PF13561_consen 234 IPVDGGFS 241 (241)
T ss_dssp EEESTTGG
T ss_pred EEECCCcC
Confidence 99999985
|
... |
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-45 Score=305.30 Aligned_cols=244 Identities=27% Similarity=0.345 Sum_probs=212.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
++++||||++|||++++++|+++|++|++++|+++.+++..+++.+.+ ++.++.+|++++++++++++++.+++ +++|
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~~~~~~~~~~~~~-g~id 78 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG-EVYAVKADLSDKDDLKNLVKEAWELL-GGID 78 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEcCCCCHHHHHHHHHHHHHhc-CCCC
Confidence 379999999999999999999999999999999998888888876544 67889999999999999999999988 7999
Q ss_pred EEEeCCCCCCC--CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhh-CCCceEEEEccccccccCCCCcchhhHHHHH
Q 024752 94 ILINNAGTFIP--KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKS-AGNGNIIFISSVAGVIAIPMCSIYASSKVAM 170 (263)
Q Consensus 94 ~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~ 170 (263)
++|||||.... .++.+.+.++|.+.+.+|+.+++.+++.++|.|.+ ++.|+||++||..+..+.++...|+++|+++
T Consensus 79 ~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~ 158 (259)
T PRK08340 79 ALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGL 158 (259)
T ss_pred EEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHH
Confidence 99999998642 35677888999999999999999999999998864 4578999999999988888899999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEEecCcccCCccccccc------cchhHH-HHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 171 NQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEK------DSNFLE-HANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 171 ~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
++++++++.|++++||+||+|+||+++|++.+.... .....+ .........|+++++.|+||++++.||+++.
T Consensus 159 ~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~fL~s~~ 238 (259)
T PRK08340 159 VQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLIAFLLSEN 238 (259)
T ss_pred HHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHHHHHHHHHHHcCcc
Confidence 999999999999999999999999999998643211 001111 1123445678999999999999999999999
Q ss_pred CCCccCcEEEeCCCcc
Q 024752 244 TSYVTGQVICVDGGYS 259 (263)
Q Consensus 244 ~~~~~G~~i~~dgG~~ 259 (263)
++++||+.|.+|||+.
T Consensus 239 ~~~itG~~i~vdgg~~ 254 (259)
T PRK08340 239 AEYMLGSTIVFDGAMT 254 (259)
T ss_pred cccccCceEeecCCcC
Confidence 9999999999999976
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-45 Score=303.36 Aligned_cols=254 Identities=43% Similarity=0.723 Sum_probs=228.2
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc--CCceEEEeccCCCHHHHHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGSVCDLKIRAQREKLMET 83 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~ 83 (263)
...|++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++... +.++.++.+|+++++++.+++++
T Consensus 2 ~~~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 81 (257)
T PRK09242 2 QHRWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDW 81 (257)
T ss_pred ccccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 3567889999999999999999999999999999999999998888888887654 56788999999999999999999
Q ss_pred HHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcch
Q 024752 84 VSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIY 163 (263)
Q Consensus 84 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y 163 (263)
+.+.+ +++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++.++||++||..+..+.++...|
T Consensus 82 ~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y 160 (257)
T PRK09242 82 VEDHW-DGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPY 160 (257)
T ss_pred HHHHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcch
Confidence 99998 89999999999876667778899999999999999999999999999998778999999999999888889999
Q ss_pred hhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 164 ASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 164 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
+++|++++.++++++.|+.++||++++|+||+++|++.......+... .......|.++..+|+|+++++.||+++.
T Consensus 161 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~va~~~~~l~~~~ 237 (257)
T PRK09242 161 GMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYY---EQVIERTPMRRVGEPEEVAAAVAFLCMPA 237 (257)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHH---HHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence 999999999999999999999999999999999999876543332222 33445678888999999999999999988
Q ss_pred CCCccCcEEEeCCCccccCC
Q 024752 244 TSYVTGQVICVDGGYSVTGF 263 (263)
Q Consensus 244 ~~~~~G~~i~~dgG~~~~~~ 263 (263)
..+++|+.|.+|||....|+
T Consensus 238 ~~~~~g~~i~~~gg~~~~~~ 257 (257)
T PRK09242 238 ASYITGQCIAVDGGFLRYGF 257 (257)
T ss_pred cccccCCEEEECCCeEeecC
Confidence 88999999999999988875
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-45 Score=301.89 Aligned_cols=248 Identities=30% Similarity=0.430 Sum_probs=222.3
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
-+++++|+++||||++|||++++++|+++|++|++++|+.+..+++.+++...+.++.++.+|+++.++++++++++.+.
T Consensus 3 ~~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (252)
T PRK07035 3 LFDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRER 82 (252)
T ss_pred ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 36789999999999999999999999999999999999998888888888776667888999999999999999999999
Q ss_pred cCCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhH
Q 024752 88 FDGKLNILINNAGTFI-PKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASS 166 (263)
Q Consensus 88 ~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s 166 (263)
+ +++|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++.++||++||..+..+.++...|++|
T Consensus 83 ~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s 161 (252)
T PRK07035 83 H-GRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSIT 161 (252)
T ss_pred c-CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchHHH
Confidence 8 78999999999754 355667889999999999999999999999999988878999999999998888899999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
|+++++++++++.|+.++||+|++|+||+++|++.......... ........|..+..+|+|+++.+.||+++...+
T Consensus 162 K~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~ 238 (252)
T PRK07035 162 KAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAI---LKQALAHIPLRRHAEPSEMAGAVLYLASDASSY 238 (252)
T ss_pred HHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHH---HHHHHccCCCCCcCCHHHHHHHHHHHhCccccC
Confidence 99999999999999999999999999999999987654333222 233445668888999999999999999999999
Q ss_pred ccCcEEEeCCCcc
Q 024752 247 VTGQVICVDGGYS 259 (263)
Q Consensus 247 ~~G~~i~~dgG~~ 259 (263)
++|+.+.+|||++
T Consensus 239 ~~g~~~~~dgg~~ 251 (252)
T PRK07035 239 TTGECLNVDGGYL 251 (252)
T ss_pred ccCCEEEeCCCcC
Confidence 9999999999975
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-45 Score=306.54 Aligned_cols=243 Identities=22% Similarity=0.211 Sum_probs=204.4
Q ss_pred CCCCCEEEEecC--CCchHHHHHHHHHHCCCeEEEeeCCc--hhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 10 SLKGMTALVTGG--TKGIGYAVVEELAAFGAIVHTCSRNE--TELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 10 ~~~~k~vlVtGa--s~giG~~~a~~l~~~g~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
++++|+++|||+ ++|||++++++|+++|++|++++|+. +..+++.+++ +.++.++++|++++++++++++++.
T Consensus 4 ~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~i~~~~~~~~ 80 (256)
T PRK07889 4 LLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL---PEPAPVLELDVTNEEHLASLADRVR 80 (256)
T ss_pred cccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc---CCCCcEEeCCCCCHHHHHHHHHHHH
Confidence 378999999999 89999999999999999999999864 3334444333 2357788999999999999999999
Q ss_pred hhcCCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCc
Q 024752 86 SQFDGKLNILINNAGTFIP----KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCS 161 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~ 161 (263)
+++ +++|++|||||+... .++.+.++++|++.+++|+.+++.++++++|.|++ +|+||++++. +..+.|.+.
T Consensus 81 ~~~-g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~--~g~Iv~is~~-~~~~~~~~~ 156 (256)
T PRK07889 81 EHV-DGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE--GGSIVGLDFD-ATVAWPAYD 156 (256)
T ss_pred HHc-CCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc--CceEEEEeec-ccccCCccc
Confidence 988 899999999998743 34667889999999999999999999999999974 5899999875 345567788
Q ss_pred chhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCC-CCCChhhHHHHHHHHc
Q 024752 162 IYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPML-RPGEPNEVSSVVAFLC 240 (263)
Q Consensus 162 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~va~~~~~l~ 240 (263)
.|++||+|+.+|+++++.|++++||+||+|+||+++|++......... ....+....|++ ++.+|+|+++.++||+
T Consensus 157 ~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~---~~~~~~~~~p~~~~~~~p~evA~~v~~l~ 233 (256)
T PRK07889 157 WMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFEL---LEEGWDERAPLGWDVKDPTPVARAVVALL 233 (256)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHH---HHHHHHhcCccccccCCHHHHHHHHHHHh
Confidence 899999999999999999999999999999999999998654321111 112334456777 5889999999999999
Q ss_pred CCCCCCccCcEEEeCCCccccC
Q 024752 241 LSATSYVTGQVICVDGGYSVTG 262 (263)
Q Consensus 241 s~~~~~~~G~~i~~dgG~~~~~ 262 (263)
++.+.+++|+.+.+|||+..-|
T Consensus 234 s~~~~~~tG~~i~vdgg~~~~~ 255 (256)
T PRK07889 234 SDWFPATTGEIVHVDGGAHAMG 255 (256)
T ss_pred CcccccccceEEEEcCceeccC
Confidence 9999999999999999998765
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-45 Score=302.52 Aligned_cols=245 Identities=31% Similarity=0.393 Sum_probs=211.1
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEee-CCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh--
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCS-RNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ-- 87 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-- 87 (263)
+++|+++||||++|||++++++|++.|++|++.+ |+.+..++...++...+.++..+.+|+++.+++..+++++.+.
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 81 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence 4689999999999999999999999999998864 6677777777777766677888999999999999999887753
Q ss_pred --cC-CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchh
Q 024752 88 --FD-GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYA 164 (263)
Q Consensus 88 --~~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~ 164 (263)
++ +++|++|||||+....++.+.+.++|++++++|+.++++++++++|.|++ .|+||++||..+..+.++...|+
T Consensus 82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~ 159 (252)
T PRK12747 82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIINISSAATRISLPDFIAYS 159 (252)
T ss_pred hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc--CCeEEEECCcccccCCCCchhHH
Confidence 31 38999999999876667788899999999999999999999999999976 48999999999999888899999
Q ss_pred hHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCC
Q 024752 165 SSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244 (263)
Q Consensus 165 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~ 244 (263)
+||+++++++++++.|+.++||+||+|+||+|+|++.......+... .......|.+++.+|+|+++++.||+++.+
T Consensus 160 ~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~dva~~~~~l~s~~~ 236 (252)
T PRK12747 160 MTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMK---QYATTISAFNRLGEVEDIADTAAFLASPDS 236 (252)
T ss_pred HHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHH---HHHHhcCcccCCCCHHHHHHHHHHHcCccc
Confidence 99999999999999999999999999999999999875433222111 111223467888999999999999999999
Q ss_pred CCccCcEEEeCCCccc
Q 024752 245 SYVTGQVICVDGGYSV 260 (263)
Q Consensus 245 ~~~~G~~i~~dgG~~~ 260 (263)
++++|+.|.+|||+.+
T Consensus 237 ~~~~G~~i~vdgg~~~ 252 (252)
T PRK12747 237 RWVTGQLIDVSGGSCL 252 (252)
T ss_pred cCcCCcEEEecCCccC
Confidence 9999999999999753
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-45 Score=309.09 Aligned_cols=240 Identities=26% Similarity=0.339 Sum_probs=211.3
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc---------hhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHH
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE---------TELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLM 81 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 81 (263)
+++|+++||||++|||++++++|+++|++|++++|+. +.+++..+++...+.++..+.+|+++++++.+++
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 6799999999999999999999999999999998876 6677778888776777889999999999999999
Q ss_pred HHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC------CceEEEEccccccc
Q 024752 82 ETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG------NGNIIFISSVAGVI 155 (263)
Q Consensus 82 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~~~iv~vsS~~~~~ 155 (263)
+++.+.+ +++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|+++. .|+||++||..+..
T Consensus 84 ~~~~~~~-g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~ 162 (286)
T PRK07791 84 DAAVETF-GGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQ 162 (286)
T ss_pred HHHHHhc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCc
Confidence 9999998 8999999999998777788899999999999999999999999999997642 37999999999999
Q ss_pred cCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCC--CCCChhhHH
Q 024752 156 AIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPML--RPGEPNEVS 233 (263)
Q Consensus 156 ~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~va 233 (263)
+.++...|+++|+|+++|+++++.|++++||+||+|+|| +.|++..... .......+.+ +..+|+|++
T Consensus 163 ~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~---------~~~~~~~~~~~~~~~~pedva 232 (286)
T PRK07791 163 GSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVF---------AEMMAKPEEGEFDAMAPENVS 232 (286)
T ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhH---------HHHHhcCcccccCCCCHHHHH
Confidence 999999999999999999999999999999999999999 8888753221 1111122333 356899999
Q ss_pred HHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 234 SVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 234 ~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
++++||+++.+.+++|+.|.+|||....
T Consensus 233 ~~~~~L~s~~~~~itG~~i~vdgG~~~~ 260 (286)
T PRK07791 233 PLVVWLGSAESRDVTGKVFEVEGGKISV 260 (286)
T ss_pred HHHHHHhCchhcCCCCcEEEEcCCceEE
Confidence 9999999999999999999999998653
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-45 Score=302.00 Aligned_cols=249 Identities=34% Similarity=0.478 Sum_probs=223.4
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
+++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.+.+.++.++.+|+++++++.++++++.+.+
T Consensus 3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 82 (253)
T PRK06172 3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAY 82 (253)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 56889999999999999999999999999999999999998888888887777778999999999999999999999988
Q ss_pred CCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 89 DGKLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 89 ~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+++|++|||||.... .++.+.+.++|++.+++|+.+++.++++++|.|.+++.+++|++||..+..+.++...|+++|
T Consensus 83 -g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK 161 (253)
T PRK06172 83 -GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASK 161 (253)
T ss_pred -CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHH
Confidence 799999999998654 346788999999999999999999999999999887789999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
+++++++++++.|+.++||+|++|+||+++|++........ ......+....|..+..+|+|+++.+.||+++.+.++
T Consensus 162 aa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~p~~ia~~~~~l~~~~~~~~ 239 (253)
T PRK06172 162 HAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEAD--PRKAEFAAAMHPVGRIGKVEEVASAVLYLCSDGASFT 239 (253)
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccC--hHHHHHHhccCCCCCccCHHHHHHHHHHHhCccccCc
Confidence 99999999999999999999999999999999987653311 1122344456788899999999999999999999999
Q ss_pred cCcEEEeCCCccc
Q 024752 248 TGQVICVDGGYSV 260 (263)
Q Consensus 248 ~G~~i~~dgG~~~ 260 (263)
+|+.|.+|||.++
T Consensus 240 ~G~~i~~dgg~~~ 252 (253)
T PRK06172 240 TGHALMVDGGATA 252 (253)
T ss_pred CCcEEEECCCccC
Confidence 9999999999854
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-44 Score=308.25 Aligned_cols=245 Identities=30% Similarity=0.352 Sum_probs=212.6
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc--hhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE--TELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
++++|+++||||++|||++++++|+++|++|++.+|+. +..+++.+.+...+.++.++.+|+++++++.++++++.+.
T Consensus 46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 125 (294)
T PRK07985 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA 125 (294)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 48899999999999999999999999999999988753 3455555555555667888999999999999999999998
Q ss_pred cCCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhH
Q 024752 88 FDGKLNILINNAGTFI-PKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASS 166 (263)
Q Consensus 88 ~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s 166 (263)
+ +++|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|.|++ .++||++||..+..+.++..+|+++
T Consensus 126 ~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~iv~iSS~~~~~~~~~~~~Y~as 202 (294)
T PRK07985 126 L-GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK--GASIITTSSIQAYQPSPHLLDYAAT 202 (294)
T ss_pred h-CCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc--CCEEEEECCchhccCCCCcchhHHH
Confidence 8 89999999999753 356778899999999999999999999999999965 4899999999999888889999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
|+|++.++++++.|++++||+||+|+||+|+|++........ +....+....|++++..|+|+++++.||+++.+.+
T Consensus 203 Kaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~---~~~~~~~~~~~~~r~~~pedva~~~~fL~s~~~~~ 279 (294)
T PRK07985 203 KAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQ---DKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSY 279 (294)
T ss_pred HHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCH---HHHHHHhccCCCCCCCCHHHHHHHHHhhhChhcCC
Confidence 999999999999999999999999999999999853221111 11234455678889999999999999999999999
Q ss_pred ccCcEEEeCCCccc
Q 024752 247 VTGQVICVDGGYSV 260 (263)
Q Consensus 247 ~~G~~i~~dgG~~~ 260 (263)
++|+.|.+|||+++
T Consensus 280 itG~~i~vdgG~~~ 293 (294)
T PRK07985 280 VTAEVHGVCGGEHL 293 (294)
T ss_pred ccccEEeeCCCeeC
Confidence 99999999999864
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-44 Score=300.00 Aligned_cols=246 Identities=33% Similarity=0.492 Sum_probs=215.1
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
+++++|+++||||++|||++++++|+++|++|++++|+.. ++..+.+...+.++.++.+|+++++++.++++++.+.+
T Consensus 1 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (248)
T TIGR01832 1 FSLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEF 78 (248)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999999999999999999999753 34445555556678899999999999999999998887
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccccccCCCCcchhhHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.+....|+++|
T Consensus 79 -~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK 157 (248)
T TIGR01832 79 -GHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASK 157 (248)
T ss_pred -CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHH
Confidence 7899999999998777777888999999999999999999999999998765 68999999999888888889999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
++++.++++++.|+.++||+||+|+||+++|++.......... ........|.+++.+|+|+++++.+|+++.+.++
T Consensus 158 aa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~ 234 (248)
T TIGR01832 158 HGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDR---NAAILERIPAGRWGTPDDIGGPAVFLASSASDYV 234 (248)
T ss_pred HHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHH---HHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCc
Confidence 9999999999999999999999999999999986543222111 1233445788899999999999999999989999
Q ss_pred cCcEEEeCCCccc
Q 024752 248 TGQVICVDGGYSV 260 (263)
Q Consensus 248 ~G~~i~~dgG~~~ 260 (263)
+|+.+.+|||+.+
T Consensus 235 ~G~~i~~dgg~~~ 247 (248)
T TIGR01832 235 NGYTLAVDGGWLA 247 (248)
T ss_pred CCcEEEeCCCEec
Confidence 9999999999864
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-45 Score=303.59 Aligned_cols=238 Identities=33% Similarity=0.473 Sum_probs=209.7
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
++++|+++||||++|||++++++|+++|++|++++|+.... .++.++.+|++++++++++++++.+++
T Consensus 3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-----------~~~~~~~~D~~~~~~i~~~~~~~~~~~- 70 (258)
T PRK06398 3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-----------NDVDYFKVDVSNKEQVIKGIDYVISKY- 70 (258)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-----------CceEEEEccCCCHHHHHHHHHHHHHHc-
Confidence 57899999999999999999999999999999999986532 247789999999999999999999988
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
+++|++|||||+....++.+.+.++|++.+++|+.+++.++++++|+|++++.++||++||..+..+.++...|+++|++
T Consensus 71 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa 150 (258)
T PRK06398 71 GRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHA 150 (258)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhHHH
Confidence 78999999999987778888999999999999999999999999999988778999999999999888899999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEEecCcccCCccccccc-----cc-hhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 170 MNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEK-----DS-NFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
++.++++++.|+.+. |+||+|+||+++|++...... .. ...+....+....|+++..+|+|++++++||+++.
T Consensus 151 l~~~~~~la~e~~~~-i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~s~~ 229 (258)
T PRK06398 151 VLGLTRSIAVDYAPT-IRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLASDL 229 (258)
T ss_pred HHHHHHHHHHHhCCC-CEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCHHHHHHHHHHHcCcc
Confidence 999999999999885 999999999999998754321 11 11111223344568889999999999999999999
Q ss_pred CCCccCcEEEeCCCccc
Q 024752 244 TSYVTGQVICVDGGYSV 260 (263)
Q Consensus 244 ~~~~~G~~i~~dgG~~~ 260 (263)
+.+++|+.+.+|||.+.
T Consensus 230 ~~~~~G~~i~~dgg~~~ 246 (258)
T PRK06398 230 ASFITGECVTVDGGLRA 246 (258)
T ss_pred cCCCCCcEEEECCcccc
Confidence 99999999999999754
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-45 Score=297.35 Aligned_cols=223 Identities=26% Similarity=0.355 Sum_probs=203.2
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc-CCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
.+++++++|||||+|||+++|++|+++|++|++++|+++++++++++++.. +..+..+++|+++++++.++.+++.+..
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~ 82 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG 82 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence 467899999999999999999999999999999999999999999999865 5779999999999999999999999986
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+.||++|||||++..+++.+.++++.++++++|+.+...++++++|.|.+++.|+||+++|.++..+.|.+..|++||+
T Consensus 83 -~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATKa 161 (265)
T COG0300 83 -GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKA 161 (265)
T ss_pred -CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCC
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS 242 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~ 242 (263)
++.+|+++|+.|+.+.||+|.+++||++.|++......+.. ...+...+.+|+++++..+..+..
T Consensus 162 ~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~~~~~~---------~~~~~~~~~~~~~va~~~~~~l~~ 226 (265)
T COG0300 162 FVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAKGSDVY---------LLSPGELVLSPEDVAEAALKALEK 226 (265)
T ss_pred HHHHHHHHHHHHhcCCCeEEEEEecCccccccccccccccc---------cccchhhccCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999862211111 112455678899999998876643
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-45 Score=304.18 Aligned_cols=248 Identities=30% Similarity=0.387 Sum_probs=212.3
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
.+++|+++||||++|||++++++|+++|++|++++|+++.++++.+++ +.++.++++|++++++++++++++.+.+
T Consensus 3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 78 (263)
T PRK06200 3 WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF---GDHVLVVEGDVTSYADNQRAVDQTVDAF- 78 (263)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHhc-
Confidence 478999999999999999999999999999999999988877665554 3457889999999999999999999988
Q ss_pred CCccEEEeCCCCCCC-CCCCCCCHHH----HHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchh
Q 024752 90 GKLNILINNAGTFIP-KETTEFTEED----FSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYA 164 (263)
Q Consensus 90 ~~id~li~~ag~~~~-~~~~~~~~~~----~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~ 164 (263)
+++|++|||||+... .++.+.+.++ |++++++|+.+++.++++++|.|+++ +|+||+++|..+..+.++...|+
T Consensus 79 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y~ 157 (263)
T PRK06200 79 GKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS-GGSMIFTLSNSSFYPGGGGPLYT 157 (263)
T ss_pred CCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc-CCEEEEECChhhcCCCCCCchhH
Confidence 899999999998643 4555566655 89999999999999999999998765 48999999999998888889999
Q ss_pred hHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccc--c----chhHHHHHHhHhcCCCCCCCChhhHHHHHHH
Q 024752 165 SSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEK--D----SNFLEHANRMVLRTPMLRPGEPNEVSSVVAF 238 (263)
Q Consensus 165 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ 238 (263)
++|++++.++++++.|+++ +|+||+|+||+++|++...... . ....+.........|+++..+|+|+++++.|
T Consensus 158 ~sK~a~~~~~~~la~el~~-~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~f 236 (263)
T PRK06200 158 ASKHAVVGLVRQLAYELAP-KIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTGPYVL 236 (263)
T ss_pred HHHHHHHHHHHHHHHHHhc-CcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCHHHHhhhhhh
Confidence 9999999999999999998 4999999999999998642210 0 0111112334556799999999999999999
Q ss_pred HcCCC-CCCccCcEEEeCCCccccCC
Q 024752 239 LCLSA-TSYVTGQVICVDGGYSVTGF 263 (263)
Q Consensus 239 l~s~~-~~~~~G~~i~~dgG~~~~~~ 263 (263)
|+++. +.++||+.|.+|||+.+.|+
T Consensus 237 l~s~~~~~~itG~~i~vdgG~~~~~~ 262 (263)
T PRK06200 237 LASRRNSRALTGVVINADGGLGIRGI 262 (263)
T ss_pred eecccccCcccceEEEEcCceeeccc
Confidence 99998 99999999999999998874
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-44 Score=298.34 Aligned_cols=252 Identities=31% Similarity=0.489 Sum_probs=227.1
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
+.+++++|+++||||+++||++++++|+++|++|++++|+++.+++..+++...+.++.++.+|+++++++.++++++.+
T Consensus 5 ~~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 84 (256)
T PRK06124 5 QRFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDA 84 (256)
T ss_pred cccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 36678999999999999999999999999999999999999888888888877677788999999999999999999999
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhH
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASS 166 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s 166 (263)
.+ +++|++|||+|.....++.+.+.++|++.+++|+.+++.+++++++.|.+++.+++|++||..+..+.++...|+++
T Consensus 85 ~~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 163 (256)
T PRK06124 85 EH-GRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAA 163 (256)
T ss_pred hc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccHhHHH
Confidence 88 79999999999887777888899999999999999999999999999988878999999999999888999999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
|++++.++++++.|+.++||++++|+||+++|++.......+... ..+....|.+++.+|+|+++++.+|+++.+.+
T Consensus 164 K~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~ 240 (256)
T PRK06124 164 KQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVG---PWLAQRTPLGRWGRPEEIAGAAVFLASPAASY 240 (256)
T ss_pred HHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHH---HHHHhcCCCCCCCCHHHHHHHHHHHcCcccCC
Confidence 999999999999999999999999999999999865433222222 33445668889999999999999999999999
Q ss_pred ccCcEEEeCCCccccC
Q 024752 247 VTGQVICVDGGYSVTG 262 (263)
Q Consensus 247 ~~G~~i~~dgG~~~~~ 262 (263)
++|+.|.+|||+..++
T Consensus 241 ~~G~~i~~dgg~~~~~ 256 (256)
T PRK06124 241 VNGHVLAVDGGYSVHF 256 (256)
T ss_pred cCCCEEEECCCccccC
Confidence 9999999999998763
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-44 Score=306.78 Aligned_cols=246 Identities=33% Similarity=0.436 Sum_probs=215.0
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCch--hHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET--ELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
.+++|++|||||++|||++++++|+++|++|+++.++.+ ..++..+++...+.++.++.+|++++++++++++++.+.
T Consensus 52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 131 (300)
T PRK06128 52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE 131 (300)
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence 378999999999999999999999999999998887643 345566666666777889999999999999999999998
Q ss_pred cCCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhH
Q 024752 88 FDGKLNILINNAGTFI-PKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASS 166 (263)
Q Consensus 88 ~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s 166 (263)
+ +++|++|||||... ..++.+.+.++|++.+++|+.++++++++++|.|++ +++||++||..+..+.++...|++|
T Consensus 132 ~-g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~as 208 (300)
T PRK06128 132 L-GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP--GASIINTGSIQSYQPSPTLLDYAST 208 (300)
T ss_pred h-CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc--CCEEEEECCccccCCCCCchhHHHH
Confidence 8 79999999999864 356778899999999999999999999999999865 4799999999999888889999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
|++++.|+++++.|+.++||+||+|+||+++|++........ +....+....|.++++.|+|++.+++||+++.+.+
T Consensus 209 K~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~---~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~~ 285 (300)
T PRK06128 209 KAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPP---EKIPDFGSETPMKRPGQPVEMAPLYVLLASQESSY 285 (300)
T ss_pred HHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCH---HHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccC
Confidence 999999999999999999999999999999999864321111 12234455678999999999999999999999999
Q ss_pred ccCcEEEeCCCcccc
Q 024752 247 VTGQVICVDGGYSVT 261 (263)
Q Consensus 247 ~~G~~i~~dgG~~~~ 261 (263)
++|+.|++|||..++
T Consensus 286 ~~G~~~~v~gg~~~~ 300 (300)
T PRK06128 286 VTGEVFGVTGGLLLS 300 (300)
T ss_pred ccCcEEeeCCCEeCc
Confidence 999999999998764
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-44 Score=299.81 Aligned_cols=246 Identities=34% Similarity=0.467 Sum_probs=210.0
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
.+++++|+++||||++|||++++++|+++|++|++++|+.+... +++... .+.++.+|++++++++++++++.+.
T Consensus 2 ~~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~---~~l~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~ 76 (255)
T PRK06463 2 SMRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEA---KELREK--GVFTIKCDVGNRDQVKKSKEVVEKE 76 (255)
T ss_pred CCCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHH---HHHHhC--CCeEEEecCCCHHHHHHHHHHHHHH
Confidence 35678999999999999999999999999999998877654322 223222 3678899999999999999999998
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccc-cCCCCcchhhH
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVI-AIPMCSIYASS 166 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-~~~~~~~Y~~s 166 (263)
+ +++|++|||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+.. +.++...|++|
T Consensus 77 ~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~as 155 (255)
T PRK06463 77 F-GRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAIT 155 (255)
T ss_pred c-CCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHHH
Confidence 8 899999999999776777788999999999999999999999999999877789999999988774 34567889999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
|+|+++++++++.|+.++||+||+|+||+++|++.......+........+....|.++..+|+|++++++||+++.+.+
T Consensus 156 Kaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 235 (255)
T PRK06463 156 KAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFLASDDARY 235 (255)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcCCCcCHHHHHHHHHHHcChhhcC
Confidence 99999999999999999999999999999999987543222222222234455678889999999999999999999999
Q ss_pred ccCcEEEeCCCcc
Q 024752 247 VTGQVICVDGGYS 259 (263)
Q Consensus 247 ~~G~~i~~dgG~~ 259 (263)
++|+.+.+|||..
T Consensus 236 ~~G~~~~~dgg~~ 248 (255)
T PRK06463 236 ITGQVIVADGGRI 248 (255)
T ss_pred CCCCEEEECCCee
Confidence 9999999999975
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-44 Score=298.35 Aligned_cols=248 Identities=31% Similarity=0.425 Sum_probs=219.4
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
+|+++||||++|||+++++.|+++|++|++++|+.+..++...++...+.++.++.+|+++++++.++++++.+++ +++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i 80 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTF-GDL 80 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-CCC
Confidence 7899999999999999999999999999999999988888888887666678889999999999999999999998 889
Q ss_pred cEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccccccCCCCcchhhHHHHHH
Q 024752 93 NILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVIAIPMCSIYASSKVAMN 171 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~ 171 (263)
|++|||||+....++.+.+.++|++.+++|+.+++.+++.+++.|++.+ .++||++||..+..+.++...|+++|++++
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 160 (256)
T PRK08643 81 NVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVR 160 (256)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHHHHH
Confidence 9999999987777788889999999999999999999999999998754 579999999999888888999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEEecCcccCCcccccccc------chhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCC
Q 024752 172 QLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKD------SNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245 (263)
Q Consensus 172 ~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~ 245 (263)
.++++++.|+.++||+|++|+||+++|++....... .........+....|.+++.+|+|+++++.||+++.+.
T Consensus 161 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~L~~~~~~ 240 (256)
T PRK08643 161 GLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSFLAGPDSD 240 (256)
T ss_pred HHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCHHHHHHHHHHHhCcccc
Confidence 999999999999999999999999999987543211 00000112344467888999999999999999999999
Q ss_pred CccCcEEEeCCCcccc
Q 024752 246 YVTGQVICVDGGYSVT 261 (263)
Q Consensus 246 ~~~G~~i~~dgG~~~~ 261 (263)
+++|+.|.+|||+..+
T Consensus 241 ~~~G~~i~vdgg~~~~ 256 (256)
T PRK08643 241 YITGQTIIVDGGMVFH 256 (256)
T ss_pred CccCcEEEeCCCeecC
Confidence 9999999999998764
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-44 Score=298.73 Aligned_cols=254 Identities=29% Similarity=0.514 Sum_probs=225.6
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
.+.+++++|+++|||++++||++++++|+++|++|++++|+.+.+++..+++...+.++.++++|++++++++++++++.
T Consensus 3 ~~~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 82 (265)
T PRK07097 3 ENLFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIE 82 (265)
T ss_pred ccccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999998888888887767778999999999999999999999
Q ss_pred hhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhh
Q 024752 86 SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYAS 165 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~ 165 (263)
+.+ +++|++|||||+....++.+.+.++|++++++|+.+++.+++.++|.|++++.++||++||..+..+.++...|++
T Consensus 83 ~~~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~ 161 (265)
T PRK07097 83 KEV-GVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAA 161 (265)
T ss_pred HhC-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHHH
Confidence 988 7899999999998777788889999999999999999999999999999887899999999998888888999999
Q ss_pred HHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccc---cchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCC
Q 024752 166 SKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEK---DSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS 242 (263)
Q Consensus 166 sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~ 242 (263)
+|++++.++++++.|+.++||+|++|+||+++|++...... ...............|..++.+|+|+++.+.+|+++
T Consensus 162 sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 241 (265)
T PRK07097 162 AKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAVFLASD 241 (265)
T ss_pred HHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCHHHHHHHHHHHhCc
Confidence 99999999999999999999999999999999998754322 101111112233456788899999999999999999
Q ss_pred CCCCccCcEEEeCCCccc
Q 024752 243 ATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 243 ~~~~~~G~~i~~dgG~~~ 260 (263)
.+.+++|+.+.+|||...
T Consensus 242 ~~~~~~g~~~~~~gg~~~ 259 (265)
T PRK07097 242 ASNFVNGHILYVDGGILA 259 (265)
T ss_pred ccCCCCCCEEEECCCcee
Confidence 889999999999999754
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-44 Score=297.11 Aligned_cols=252 Identities=33% Similarity=0.485 Sum_probs=222.5
Q ss_pred CcccccccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHH
Q 024752 1 MSDFREQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKL 80 (263)
Q Consensus 1 ~~~~~~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 80 (263)
|++- +.+.+++|+++||||++|||++++++|+++|++|++++|+.+..++..+++...+.++.++.+|+++++++.++
T Consensus 1 ~~~~--~~~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~ 78 (255)
T PRK06113 1 MFNS--DNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSAL 78 (255)
T ss_pred CCCc--cccCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence 5555 56678999999999999999999999999999999999999888888888776666788899999999999999
Q ss_pred HHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCC
Q 024752 81 METVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMC 160 (263)
Q Consensus 81 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~ 160 (263)
++.+.+.+ +++|++|||||...+.++ +.+.++|++.+++|+.++++++++++|.|.+.+.++||++||..+..+.++.
T Consensus 79 ~~~~~~~~-~~~d~li~~ag~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~ 156 (255)
T PRK06113 79 ADFALSKL-GKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINM 156 (255)
T ss_pred HHHHHHHc-CCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCc
Confidence 99999888 789999999998765554 6788999999999999999999999999987777899999999999888888
Q ss_pred cchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHc
Q 024752 161 SIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC 240 (263)
Q Consensus 161 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~ 240 (263)
..|+++|+++++++++++.++.+.||+||+|+||+++|++....... .. ........|..++..|+|+++++.||+
T Consensus 157 ~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~d~a~~~~~l~ 232 (255)
T PRK06113 157 TSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITP-EI---EQKMLQHTPIRRLGQPQDIANAALFLC 232 (255)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCH-HH---HHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999987643211 11 133345667888899999999999999
Q ss_pred CCCCCCccCcEEEeCCCccc
Q 024752 241 LSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 241 s~~~~~~~G~~i~~dgG~~~ 260 (263)
++...+++|+.|++|||...
T Consensus 233 ~~~~~~~~G~~i~~~gg~~~ 252 (255)
T PRK06113 233 SPAASWVSGQILTVSGGGVQ 252 (255)
T ss_pred CccccCccCCEEEECCCccc
Confidence 99999999999999999643
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-45 Score=307.88 Aligned_cols=249 Identities=23% Similarity=0.297 Sum_probs=198.8
Q ss_pred cCCCCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHH----------hcCC-----ceEEEecc
Q 024752 8 RWSLKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWK----------SKGL-----QVSGSVCD 70 (263)
Q Consensus 8 ~~~~~~k~vlVtGas--~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~----------~~~~-----~~~~~~~D 70 (263)
..+++||+++|||++ +|||+++|+.|+++|++|++.++.+ .+....+..+ ..+. ++..+.+|
T Consensus 3 ~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 81 (299)
T PRK06300 3 KIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDAS 81 (299)
T ss_pred CcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhh
Confidence 467899999999996 9999999999999999999977642 1111100000 0001 11112233
Q ss_pred CCC------------------HHHHHHHHHHHHhhcCCCccEEEeCCCCCC--CCCCCCCCHHHHHHHHHhhhHhHHHHH
Q 024752 71 LKI------------------RAQREKLMETVSSQFDGKLNILINNAGTFI--PKETTEFTEEDFSTVMTTNFESAYHLS 130 (263)
Q Consensus 71 ~~~------------------~~~~~~~~~~~~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~ 130 (263)
+++ +++++++++++.+++ +++|+||||||... ..++.+.+.++|++.+++|+.|+++++
T Consensus 82 ~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~-G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~ 160 (299)
T PRK06300 82 FDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDF-GHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLL 160 (299)
T ss_pred cCCCEEeecccCccccccCCCHHHHHHHHHHHHHHc-CCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence 333 346899999999998 89999999999754 467888999999999999999999999
Q ss_pred HHHhHHHhhCCCceEEEEccccccccCCCCc-chhhHHHHHHHHHHHHHHHHcc-CCcEEEEEecCcccCCccccccccc
Q 024752 131 QLAHPLLKSAGNGNIIFISSVAGVIAIPMCS-IYASSKVAMNQLTKNLACEWAK-DKIRVNTVAPWVIRTPLLDTVEKDS 208 (263)
Q Consensus 131 ~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~-~Y~~sK~a~~~~~~~~a~e~~~-~gi~v~~v~PG~v~t~~~~~~~~~~ 208 (263)
++++|+|++ +|+||+++|..+..+.|+.. .|++||+|+++|+++++.|+++ +|||||+|+||+++|++.......+
T Consensus 161 ~a~~p~m~~--~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~~ 238 (299)
T PRK06300 161 SHFGPIMNP--GGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFIE 238 (299)
T ss_pred HHHHHHhhc--CCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccccH
Confidence 999999976 47999999999988888765 8999999999999999999987 5999999999999999865432111
Q ss_pred hhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCccccCC
Q 024752 209 NFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVTGF 263 (263)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~ 263 (263)
.. ........|+++...|+|+++.+.||+++.+.++||+.+.+|||+++.|+
T Consensus 239 ~~---~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~~~~ 290 (299)
T PRK06300 239 RM---VDYYQDWAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGANVMGI 290 (299)
T ss_pred HH---HHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCcceecC
Confidence 11 12333456888999999999999999999999999999999999999885
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-44 Score=297.64 Aligned_cols=249 Identities=29% Similarity=0.405 Sum_probs=216.4
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc-CCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
|++++|+++|||+++|||+++++.|+++|++|++++|++++.++..+++... +.++..+.+|+++++++.+++++
T Consensus 3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~---- 78 (259)
T PRK06125 3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE---- 78 (259)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH----
Confidence 5688999999999999999999999999999999999998888887777653 55688899999999999888764
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+ +++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++.++||++||..+..+.+.+..|+++|
T Consensus 79 ~-g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ask 157 (259)
T PRK06125 79 A-GDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGN 157 (259)
T ss_pred h-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhHHHH
Confidence 3 789999999998877788889999999999999999999999999999987778999999999888888888999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccc-----hhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCC
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDS-----NFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS 242 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~ 242 (263)
+++++++++++.|+.++||+||+|+||+++|++........ ...+.+..+....|.+++.+|+|+++++.||+++
T Consensus 158 ~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~ 237 (259)
T PRK06125 158 AALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLVAFLASP 237 (259)
T ss_pred HHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHHHHHHcCc
Confidence 99999999999999999999999999999999754321100 0111223444567888899999999999999999
Q ss_pred CCCCccCcEEEeCCCccccC
Q 024752 243 ATSYVTGQVICVDGGYSVTG 262 (263)
Q Consensus 243 ~~~~~~G~~i~~dgG~~~~~ 262 (263)
.+.+++|+.|.+|||++..+
T Consensus 238 ~~~~~~G~~i~vdgg~~~~~ 257 (259)
T PRK06125 238 RSGYTSGTVVTVDGGISARG 257 (259)
T ss_pred hhccccCceEEecCCeeecC
Confidence 99999999999999987643
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-43 Score=295.97 Aligned_cols=240 Identities=29% Similarity=0.362 Sum_probs=211.6
Q ss_pred CCCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEeeCC-----------chhHHHHHHHHHhcCCceEEEeccCCCHHH
Q 024752 10 SLKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRN-----------ETELNQRIQEWKSKGLQVSGSVCDLKIRAQ 76 (263)
Q Consensus 10 ~~~~k~vlVtGas--~giG~~~a~~l~~~g~~V~~~~r~-----------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 76 (263)
.++||+++||||+ +|||+++|++|+++|++|++++|. .+..++..+++.+.+.++.++++|++++++
T Consensus 3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~ 82 (256)
T PRK12859 3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA 82 (256)
T ss_pred CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence 4789999999999 499999999999999999987542 233345556666667788999999999999
Q ss_pred HHHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc
Q 024752 77 REKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA 156 (263)
Q Consensus 77 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~ 156 (263)
+.++++++.+.+ +++|++|||||.....++.+.+.++|++.+++|+.+++.+.++++|.|++++.|+||++||..+..+
T Consensus 83 i~~~~~~~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~ 161 (256)
T PRK12859 83 PKELLNKVTEQL-GYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGP 161 (256)
T ss_pred HHHHHHHHHHHc-CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCC
Confidence 999999999988 7899999999987777788899999999999999999999999999998877899999999999988
Q ss_pred CCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHH
Q 024752 157 IPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVV 236 (263)
Q Consensus 157 ~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~ 236 (263)
.++...|+++|++++.|+++++.|+.++||+|++|+||+++|++.... . ...+....|..+..+|+|+++.+
T Consensus 162 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~-----~---~~~~~~~~~~~~~~~~~d~a~~~ 233 (256)
T PRK12859 162 MVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEE-----I---KQGLLPMFPFGRIGEPKDAARLI 233 (256)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHH-----H---HHHHHhcCCCCCCcCHHHHHHHH
Confidence 889999999999999999999999999999999999999999864321 1 12233456778888999999999
Q ss_pred HHHcCCCCCCccCcEEEeCCCc
Q 024752 237 AFLCLSATSYVTGQVICVDGGY 258 (263)
Q Consensus 237 ~~l~s~~~~~~~G~~i~~dgG~ 258 (263)
.||+++.+.+++|+.|.+|||+
T Consensus 234 ~~l~s~~~~~~~G~~i~~dgg~ 255 (256)
T PRK12859 234 KFLASEEAEWITGQIIHSEGGF 255 (256)
T ss_pred HHHhCccccCccCcEEEeCCCc
Confidence 9999999999999999999996
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-43 Score=296.89 Aligned_cols=252 Identities=29% Similarity=0.453 Sum_probs=218.4
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
.+++|+++||||++|||++++++|+++|++|++++|+.. .++..+++...+.++.++.+|++++++++++++++.+.+
T Consensus 3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~- 80 (263)
T PRK08226 3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKE- 80 (263)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc-
Confidence 467999999999999999999999999999999999875 444555555556678889999999999999999999998
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccc-ccCCCCcchhhHHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGV-IAIPMCSIYASSKV 168 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~-~~~~~~~~Y~~sK~ 168 (263)
+++|++|||||.....++.+.+.+++++.+++|+.+++.++++++|.|.+++.++||++||..+. .+.++...|+++|+
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK~ 160 (263)
T PRK08226 81 GRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKA 160 (263)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchHHHHHH
Confidence 88999999999987777888899999999999999999999999999988777899999998873 56677889999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccccc---chhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCC
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKD---SNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~ 245 (263)
++++++++++.|+.++||+|++|+||+++|++....... ....+.........|++++.+|+|+++.+.||+++.+.
T Consensus 161 a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~~ 240 (263)
T PRK08226 161 AIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLASDESS 240 (263)
T ss_pred HHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCchhc
Confidence 999999999999999999999999999999987553211 11122234444567888999999999999999999999
Q ss_pred CccCcEEEeCCCccccCC
Q 024752 246 YVTGQVICVDGGYSVTGF 263 (263)
Q Consensus 246 ~~~G~~i~~dgG~~~~~~ 263 (263)
+++|+.|.+|||.++.++
T Consensus 241 ~~~g~~i~~dgg~~~~~~ 258 (263)
T PRK08226 241 YLTGTQNVIDGGSTLPET 258 (263)
T ss_pred CCcCceEeECCCcccCce
Confidence 999999999999988764
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-44 Score=301.19 Aligned_cols=249 Identities=29% Similarity=0.401 Sum_probs=208.1
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
|++++|+++||||++|||++++++|+++|++|++++|+.+.++++... .+.++..+.+|+++++++.++++++.+.+
T Consensus 1 m~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (262)
T TIGR03325 1 MRLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA---HGDAVVGVEGDVRSLDDHKEAVARCVAAF 77 (262)
T ss_pred CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh---cCCceEEEEeccCCHHHHHHHHHHHHHHh
Confidence 467899999999999999999999999999999999998776665432 24568889999999999999999999988
Q ss_pred CCCccEEEeCCCCCCC-CCCCCCCH----HHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcch
Q 024752 89 DGKLNILINNAGTFIP-KETTEFTE----EDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIY 163 (263)
Q Consensus 89 ~~~id~li~~ag~~~~-~~~~~~~~----~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y 163 (263)
+++|++|||||.... .++.+.+. ++|++.+++|+.+++.++++++|.|.++ +|++|+++|..+..+.++...|
T Consensus 78 -g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y 155 (262)
T TIGR03325 78 -GKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVAS-RGSVIFTISNAGFYPNGGGPLY 155 (262)
T ss_pred -CCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhc-CCCEEEEeccceecCCCCCchh
Confidence 899999999997532 33333333 5799999999999999999999999875 4899999999998888888899
Q ss_pred hhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccc---ccch--hHHHHHHhHhcCCCCCCCChhhHHHHHHH
Q 024752 164 ASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVE---KDSN--FLEHANRMVLRTPMLRPGEPNEVSSVVAF 238 (263)
Q Consensus 164 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~ 238 (263)
+++|+|+++|+++++.|++++ |+||+|+||+++|++..... .... ............|++++.+|+|+++++.|
T Consensus 156 ~~sKaa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~ 234 (262)
T TIGR03325 156 TAAKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYVF 234 (262)
T ss_pred HHHHHHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCCCCCChHHhhhheee
Confidence 999999999999999999986 99999999999999864321 0100 00011223345789999999999999999
Q ss_pred HcCCC-CCCccCcEEEeCCCccccCC
Q 024752 239 LCLSA-TSYVTGQVICVDGGYSVTGF 263 (263)
Q Consensus 239 l~s~~-~~~~~G~~i~~dgG~~~~~~ 263 (263)
|+++. +.++||+.|.+|||+.+.|+
T Consensus 235 l~s~~~~~~~tG~~i~vdgg~~~~~~ 260 (262)
T TIGR03325 235 FATRGDTVPATGAVLNYDGGMGVRGF 260 (262)
T ss_pred eecCCCcccccceEEEecCCeeeccc
Confidence 99974 57899999999999998874
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-43 Score=298.08 Aligned_cols=253 Identities=25% Similarity=0.334 Sum_probs=213.5
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
.+..++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++. .+.++.++++|++++++++++++++.
T Consensus 11 ~~~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~ 89 (280)
T PLN02253 11 LPSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG-GEPNVCFFHCDVTVEDDVSRAVDFTV 89 (280)
T ss_pred ccccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhc-CCCceEEEEeecCCHHHHHHHHHHHH
Confidence 34456889999999999999999999999999999999999887777766663 24568899999999999999999999
Q ss_pred hhcCCCccEEEeCCCCCCC--CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcch
Q 024752 86 SQFDGKLNILINNAGTFIP--KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIY 163 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y 163 (263)
+.+ +++|++|||||.... .++.+.+.++|++.+++|+.++++++++++|.|.+++.|+||+++|..+..+.++...|
T Consensus 90 ~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y 168 (280)
T PLN02253 90 DKF-GTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAY 168 (280)
T ss_pred HHh-CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCccc
Confidence 998 899999999998643 35677899999999999999999999999999988777999999999998888888899
Q ss_pred hhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchh-HHHH----HHhHhcCCC-CCCCChhhHHHHHH
Q 024752 164 ASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNF-LEHA----NRMVLRTPM-LRPGEPNEVSSVVA 237 (263)
Q Consensus 164 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~-~~~~----~~~~~~~~~-~~~~~~~~va~~~~ 237 (263)
+++|++++.++++++.|++++||+|++++||+++|++.......... .... .......++ ++...|+|+++++.
T Consensus 169 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~dva~~~~ 248 (280)
T PLN02253 169 TGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANAVL 248 (280)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999975432211111 1100 111122333 45578999999999
Q ss_pred HHcCCCCCCccCcEEEeCCCccc
Q 024752 238 FLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 238 ~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
||+++.+.+++|+.|.+|||+..
T Consensus 249 ~l~s~~~~~i~G~~i~vdgG~~~ 271 (280)
T PLN02253 249 FLASDEARYISGLNLMIDGGFTC 271 (280)
T ss_pred hhcCcccccccCcEEEECCchhh
Confidence 99999999999999999999864
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-43 Score=293.49 Aligned_cols=248 Identities=32% Similarity=0.455 Sum_probs=217.7
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc-hhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE-TELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
.++++|+++||||++|||++++++|+++|++|++++|+. +..+...+++...+.++.++.+|+++.+++.++++++.+.
T Consensus 3 ~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~ 82 (261)
T PRK08936 3 SDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKE 82 (261)
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Confidence 358899999999999999999999999999999888854 4556666677666677889999999999999999999998
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccccccCCCCcchhhH
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVIAIPMCSIYASS 166 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~s 166 (263)
+ +++|++|||||.....++.+.+.++|++.+++|+.+++.+++.++|+|.+++ .++||++||..+..+.++...|+++
T Consensus 83 ~-g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~s 161 (261)
T PRK08936 83 F-GTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAAS 161 (261)
T ss_pred c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHHH
Confidence 8 7999999999988777777889999999999999999999999999998764 5899999999988888899999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
|+|++.++++++.|+.++||+|++|+||+++|++.......+. .........|.++..+|+|+++.+.||+++.+.+
T Consensus 162 Kaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 238 (261)
T PRK08936 162 KGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPK---QRADVESMIPMGYIGKPEEIAAVAAWLASSEASY 238 (261)
T ss_pred HHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHH---HHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCC
Confidence 9999999999999999999999999999999998653322211 1123344668889999999999999999999999
Q ss_pred ccCcEEEeCCCccc
Q 024752 247 VTGQVICVDGGYSV 260 (263)
Q Consensus 247 ~~G~~i~~dgG~~~ 260 (263)
++|+.|.+|||..+
T Consensus 239 ~~G~~i~~d~g~~~ 252 (261)
T PRK08936 239 VTGITLFADGGMTL 252 (261)
T ss_pred ccCcEEEECCCccc
Confidence 99999999999874
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-43 Score=294.23 Aligned_cols=242 Identities=29% Similarity=0.449 Sum_probs=212.9
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
|++++|+++||||++|||++++++|+++|++|++++|+.+. ...+..+.++++|++++++++++++.+.+.+
T Consensus 2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 73 (252)
T PRK07856 2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--------TVDGRPAEFHAADVRDPDQVAALVDAIVERH 73 (252)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--------hhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 56889999999999999999999999999999999998754 1224567889999999999999999999988
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-CCceEEEEccccccccCCCCcchhhHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-GNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+++|++|||||.....++.+.+.++|++.+++|+.+++.+++++.|.|.++ +.++||++||..+..+.++...|+++|
T Consensus 74 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK 152 (252)
T PRK07856 74 -GRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAK 152 (252)
T ss_pred -CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHH
Confidence 899999999998877777788999999999999999999999999999875 458999999999999989999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
++++.|+++++.|+.++ |++++|+||+++|++......... ....+....|.++..+|+|+++.++||+++.+.++
T Consensus 153 ~a~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~p~~va~~~~~L~~~~~~~i 228 (252)
T PRK07856 153 AGLLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSELHYGDAE---GIAAVAATVPLGRLATPADIAWACLFLASDLASYV 228 (252)
T ss_pred HHHHHHHHHHHHHhcCC-eEEEEEEeccccChHHhhhccCHH---HHHHHhhcCCCCCCcCHHHHHHHHHHHcCcccCCc
Confidence 99999999999999987 999999999999998654322211 12334456788899999999999999999988999
Q ss_pred cCcEEEeCCCccccCC
Q 024752 248 TGQVICVDGGYSVTGF 263 (263)
Q Consensus 248 ~G~~i~~dgG~~~~~~ 263 (263)
+|+.|.+|||...+++
T Consensus 229 ~G~~i~vdgg~~~~~~ 244 (252)
T PRK07856 229 SGANLEVHGGGERPAF 244 (252)
T ss_pred cCCEEEECCCcchHHH
Confidence 9999999999887653
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-43 Score=293.18 Aligned_cols=247 Identities=29% Similarity=0.391 Sum_probs=209.9
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
..+++|+++||||++|||++++++|+++|++|++++|++. .++..+++...+.++.++.+|+++++++.++++++.+.+
T Consensus 4 ~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (260)
T PRK12823 4 QRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAF 82 (260)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 3478999999999999999999999999999999999853 455666666666678899999999999999999999988
Q ss_pred CCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 89 DGKLNILINNAGTFI-PKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 89 ~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+++|++|||||... ..++.+.+.++|++.+++|+.+++++++.++|.|++++.++||++||..+.. ++..+|+++|
T Consensus 83 -~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~~~Y~~sK 159 (260)
T PRK12823 83 -GRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRG--INRVPYSAAK 159 (260)
T ss_pred -CCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccC--CCCCccHHHH
Confidence 78999999999653 4667788999999999999999999999999999988778999999987642 3456899999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccc------c-cch-hHHHHHHhHhcCCCCCCCChhhHHHHHHHH
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVE------K-DSN-FLEHANRMVLRTPMLRPGEPNEVSSVVAFL 239 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~------~-~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l 239 (263)
++++.|+++++.|++++||+|++|+||+++|++..... . ... ..+.........|++++++|+|+++++.||
T Consensus 160 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l 239 (260)
T PRK12823 160 GGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQVAAILFL 239 (260)
T ss_pred HHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999998632110 0 111 112223344567889999999999999999
Q ss_pred cCCCCCCccCcEEEeCCCcc
Q 024752 240 CLSATSYVTGQVICVDGGYS 259 (263)
Q Consensus 240 ~s~~~~~~~G~~i~~dgG~~ 259 (263)
+++.+.+++|+.+++|||..
T Consensus 240 ~s~~~~~~~g~~~~v~gg~~ 259 (260)
T PRK12823 240 ASDEASYITGTVLPVGGGDL 259 (260)
T ss_pred cCcccccccCcEEeecCCCC
Confidence 99988999999999999963
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-43 Score=293.80 Aligned_cols=244 Identities=30% Similarity=0.436 Sum_probs=216.9
Q ss_pred CCCCCEEEEecCCC-chHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHh-cC-CceEEEeccCCCHHHHHHHHHHHHh
Q 024752 10 SLKGMTALVTGGTK-GIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS-KG-LQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 10 ~~~~k~vlVtGas~-giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~-~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
.+++|+++||||+| |||+++++.|+++|++|++++|+.+.+++..+++.. .+ .++..+++|++++++++++++++.+
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 93 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE 93 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 36789999999985 999999999999999999999999888888777765 23 4688899999999999999999998
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccccccCCCCcchhh
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVIAIPMCSIYAS 165 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~ 165 (263)
.+ +++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|.|+++. .++||+++|..+..+.++...|++
T Consensus 94 ~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~ 172 (262)
T PRK07831 94 RL-GRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAA 172 (262)
T ss_pred Hc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcchHH
Confidence 88 7999999999987777788889999999999999999999999999998876 789999999998888888999999
Q ss_pred HHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCC
Q 024752 166 SKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245 (263)
Q Consensus 166 sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~ 245 (263)
+|+|+++++++++.|++++||+||+|+||+++|++....... +....+....|++++..|+|++++++||+++.++
T Consensus 173 sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~----~~~~~~~~~~~~~r~~~p~~va~~~~~l~s~~~~ 248 (262)
T PRK07831 173 AKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSA----ELLDELAAREAFGRAAEPWEVANVIAFLASDYSS 248 (262)
T ss_pred HHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCH----HHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhc
Confidence 999999999999999999999999999999999987543221 1123344456889999999999999999999999
Q ss_pred CccCcEEEeCCCc
Q 024752 246 YVTGQVICVDGGY 258 (263)
Q Consensus 246 ~~~G~~i~~dgG~ 258 (263)
++||+.|.+|+++
T Consensus 249 ~itG~~i~v~~~~ 261 (262)
T PRK07831 249 YLTGEVVSVSSQH 261 (262)
T ss_pred CcCCceEEeCCCC
Confidence 9999999999975
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-43 Score=292.43 Aligned_cols=244 Identities=32% Similarity=0.501 Sum_probs=214.6
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
+++++|+++||||+++||++++++|+++|++|++++|+.+. .+...++. +.++.++.+|+++++++.++++++.+.+
T Consensus 11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~-~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (255)
T PRK06841 11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV-AEVAAQLL--GGNAKGLVCDVSDSQSVEAAVAAVISAF 87 (255)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 57899999999999999999999999999999999998764 33333332 3456788999999999999999999988
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.+....|+++|+
T Consensus 88 -~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 166 (255)
T PRK06841 88 -GRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKA 166 (255)
T ss_pred -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHHHHHH
Confidence 7899999999998777777889999999999999999999999999998877899999999999889999999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCcc
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~ 248 (263)
+++.++++++.|++++||++++|+||+++|++........ ....+....|.+++.+|+|+++++++|+++.+.+++
T Consensus 167 a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~ 242 (255)
T PRK06841 167 GVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGE----KGERAKKLIPAGRFAYPEEIAAAALFLASDAAAMIT 242 (255)
T ss_pred HHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchh----HHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcc
Confidence 9999999999999999999999999999999865432111 112334467888999999999999999999999999
Q ss_pred CcEEEeCCCccc
Q 024752 249 GQVICVDGGYSV 260 (263)
Q Consensus 249 G~~i~~dgG~~~ 260 (263)
|+.|.+|||+.+
T Consensus 243 G~~i~~dgg~~~ 254 (255)
T PRK06841 243 GENLVIDGGYTI 254 (255)
T ss_pred CCEEEECCCccC
Confidence 999999999875
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-43 Score=292.71 Aligned_cols=248 Identities=27% Similarity=0.388 Sum_probs=216.6
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
.+++|+++|||+++|||+++++.|+++|++|++++|+.+..++..+++ +.++.++.+|++++++++++++++.+.+
T Consensus 3 ~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 78 (257)
T PRK07067 3 RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI---GPAAIAVSLDVTRQDSIDRIVAAAVERF- 78 (257)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHc-
Confidence 477999999999999999999999999999999999998877766554 3457889999999999999999999988
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccccccCCCCcchhhHHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+++|++|||||.....++.+.+.++|++.+++|+.+++.+++++++.|.+++ +++||++||..+..+.++...|++||+
T Consensus 79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 158 (257)
T PRK07067 79 GGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKA 158 (257)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhhHH
Confidence 7999999999988777788889999999999999999999999999997653 579999999988888889999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccc----c--chhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCC
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEK----D--SNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS 242 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~ 242 (263)
+++.++++++.|+.++||++++|+||+++|++...... . ....+.........|.+++.+|+|+++++.||+++
T Consensus 159 a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~ 238 (257)
T PRK07067 159 AVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLASA 238 (257)
T ss_pred HHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHHHhCc
Confidence 99999999999999999999999999999997643211 0 00111223344567899999999999999999999
Q ss_pred CCCCccCcEEEeCCCcccc
Q 024752 243 ATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 243 ~~~~~~G~~i~~dgG~~~~ 261 (263)
.+.+++|+.+++|||..++
T Consensus 239 ~~~~~~g~~~~v~gg~~~~ 257 (257)
T PRK07067 239 DADYIVAQTYNVDGGNWMS 257 (257)
T ss_pred ccccccCcEEeecCCEeCC
Confidence 9999999999999998764
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-44 Score=293.00 Aligned_cols=199 Identities=30% Similarity=0.368 Sum_probs=184.2
Q ss_pred cccccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc-CC-ceEEEeccCCCHHHHHHHH
Q 024752 4 FREQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GL-QVSGSVCDLKIRAQREKLM 81 (263)
Q Consensus 4 ~~~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~ 81 (263)
+......++||+|+|||||+|||.++|.+|+++|++++++.|..++++.+.+++.+. .. +++++++|++|++++.+++
T Consensus 3 ~~~~~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~ 82 (282)
T KOG1205|consen 3 GNLFMERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFV 82 (282)
T ss_pred ccccHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHH
Confidence 345667899999999999999999999999999999999999999999998888764 22 5999999999999999999
Q ss_pred HHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCc
Q 024752 82 ETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCS 161 (263)
Q Consensus 82 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~ 161 (263)
+++.++| |++|+||||||+......++.+.+++.+.|++|++|+++++++++|+|++++.|+||++||+++..+.|...
T Consensus 83 ~~~~~~f-g~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~ 161 (282)
T KOG1205|consen 83 EWAIRHF-GRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRS 161 (282)
T ss_pred HHHHHhc-CCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCccc
Confidence 9999999 899999999999996677888999999999999999999999999999999889999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHccCC--cEEEEEecCcccCCccccc
Q 024752 162 IYASSKVAMNQLTKNLACEWAKDK--IRVNTVAPWVIRTPLLDTV 204 (263)
Q Consensus 162 ~Y~~sK~a~~~~~~~~a~e~~~~g--i~v~~v~PG~v~t~~~~~~ 204 (263)
.|++||+|+.+|.++|+.|+.+.+ |++ +|+||+|+|++....
T Consensus 162 ~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~ 205 (282)
T KOG1205|consen 162 IYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKE 205 (282)
T ss_pred ccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchh
Confidence 999999999999999999999877 566 999999999977554
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-43 Score=289.90 Aligned_cols=244 Identities=26% Similarity=0.381 Sum_probs=212.6
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
||+++||||++|||+++++.|+++|++|++++|+.+.+++..+++...+.++.++.+|++++++++++++++.+.+ +++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i 79 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKF-GRI 79 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-CCc
Confidence 6899999999999999999999999999999999988888877776656678899999999999999999999988 789
Q ss_pred cEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-CCceEEEEccccccccCCCCcchhhHHHHHH
Q 024752 93 NILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-GNGNIIFISSVAGVIAIPMCSIYASSKVAMN 171 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~ 171 (263)
|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|.++ ..++||++||..+..+.+...+|+++|++++
T Consensus 80 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~~ 159 (252)
T PRK07677 80 DALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVL 159 (252)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHHH
Confidence 999999997666677788999999999999999999999999998764 3689999999999888888899999999999
Q ss_pred HHHHHHHHHHcc-CCcEEEEEecCcccCCc-cccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccC
Q 024752 172 QLTKNLACEWAK-DKIRVNTVAPWVIRTPL-LDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTG 249 (263)
Q Consensus 172 ~~~~~~a~e~~~-~gi~v~~v~PG~v~t~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G 249 (263)
+|+++++.|+.+ +||++++|+||+++|+. .......+. .........|.+++.+|+|+++++.||+++.+.+++|
T Consensus 160 ~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g 236 (252)
T PRK07677 160 AMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEE---AAKRTIQSVPLGRLGTPEEIAGLAYFLLSDEAAYING 236 (252)
T ss_pred HHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHH---HHHHHhccCCCCCCCCHHHHHHHHHHHcCccccccCC
Confidence 999999999974 79999999999999643 222212221 1233444567888999999999999999998889999
Q ss_pred cEEEeCCCccc
Q 024752 250 QVICVDGGYSV 260 (263)
Q Consensus 250 ~~i~~dgG~~~ 260 (263)
+.+.+|||.+.
T Consensus 237 ~~~~~~gg~~~ 247 (252)
T PRK07677 237 TCITMDGGQWL 247 (252)
T ss_pred CEEEECCCeec
Confidence 99999999764
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-43 Score=299.50 Aligned_cols=240 Identities=23% Similarity=0.298 Sum_probs=199.9
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc----------hhHHHHHHHHHhcCCceEEEeccCCCHHHHH
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE----------TELNQRIQEWKSKGLQVSGSVCDLKIRAQRE 78 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~----------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 78 (263)
.++++|+++||||++|||+++|+.|++.|++|++++|+. +.++++.+++...+.++.++.+|++++++++
T Consensus 4 ~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~ 83 (305)
T PRK08303 4 KPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVR 83 (305)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence 357899999999999999999999999999999999984 4556666677666667888999999999999
Q ss_pred HHHHHHHhhcCCCccEEEeCC-CCCC----CCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccc
Q 024752 79 KLMETVSSQFDGKLNILINNA-GTFI----PKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAG 153 (263)
Q Consensus 79 ~~~~~~~~~~~~~id~li~~a-g~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 153 (263)
++++++.+.+ +++|++|||| |... ..++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+
T Consensus 84 ~~~~~~~~~~-g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~ 162 (305)
T PRK08303 84 ALVERIDREQ-GRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTA 162 (305)
T ss_pred HHHHHHHHHc-CCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccc
Confidence 9999999998 8999999999 7531 24566788999999999999999999999999998877799999999766
Q ss_pred cc---cCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccc--cchhHHHHHHhHhcCC-CCCCC
Q 024752 154 VI---AIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEK--DSNFLEHANRMVLRTP-MLRPG 227 (263)
Q Consensus 154 ~~---~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~ 227 (263)
.. +.++...|++||+|+.+|+++++.|++++||+||+|+||+++|++...... .... .......| .++..
T Consensus 163 ~~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~----~~~~~~~p~~~~~~ 238 (305)
T PRK08303 163 EYNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENW----RDALAKEPHFAISE 238 (305)
T ss_pred cccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccch----hhhhccccccccCC
Confidence 43 234567899999999999999999999999999999999999998543211 1111 11112345 46677
Q ss_pred ChhhHHHHHHHHcCCCC-CCccCcEEE
Q 024752 228 EPNEVSSVVAFLCLSAT-SYVTGQVIC 253 (263)
Q Consensus 228 ~~~~va~~~~~l~s~~~-~~~~G~~i~ 253 (263)
+|+|++++++||+++.. .++|||.|.
T Consensus 239 ~peevA~~v~fL~s~~~~~~itG~~l~ 265 (305)
T PRK08303 239 TPRYVGRAVAALAADPDVARWNGQSLS 265 (305)
T ss_pred CHHHHHHHHHHHHcCcchhhcCCcEEE
Confidence 89999999999999874 689999875
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-42 Score=290.80 Aligned_cols=244 Identities=30% Similarity=0.409 Sum_probs=208.4
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
..+++||+++||||++|||++++++|+++|++|++++|++... ...++.++.+|++++++++++++++.++
T Consensus 4 ~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 74 (260)
T PRK06523 4 FLELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD---------LPEGVEFVAADLTTAEGCAAVARAVLER 74 (260)
T ss_pred CcCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---------cCCceeEEecCCCCHHHHHHHHHHHHHH
Confidence 3468899999999999999999999999999999999986531 1235778999999999999999999998
Q ss_pred cCCCccEEEeCCCCCC--CCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCC-CCcchh
Q 024752 88 FDGKLNILINNAGTFI--PKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIP-MCSIYA 164 (263)
Q Consensus 88 ~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-~~~~Y~ 164 (263)
+ +++|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.+ +...|+
T Consensus 75 ~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~Y~ 153 (260)
T PRK06523 75 L-GGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYA 153 (260)
T ss_pred c-CCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcchhH
Confidence 8 89999999999753 3456778899999999999999999999999999988778999999999887755 788999
Q ss_pred hHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccccc------chhHHH---HHHhHhcCCCCCCCChhhHHHH
Q 024752 165 SSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKD------SNFLEH---ANRMVLRTPMLRPGEPNEVSSV 235 (263)
Q Consensus 165 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~------~~~~~~---~~~~~~~~~~~~~~~~~~va~~ 235 (263)
++|++++.++++++.|+.++||++++|+||+++|++....... ....+. ........|.++..+|+|++++
T Consensus 154 ~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~ 233 (260)
T PRK06523 154 AAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAEL 233 (260)
T ss_pred HHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHHHHHHH
Confidence 9999999999999999999999999999999999986432210 011111 1111235688899999999999
Q ss_pred HHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 236 VAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 236 ~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
+.||+++.+++++|+.+.+|||...+
T Consensus 234 ~~~l~s~~~~~~~G~~~~vdgg~~~~ 259 (260)
T PRK06523 234 IAFLASDRAASITGTEYVIDGGTVPT 259 (260)
T ss_pred HHHHhCcccccccCceEEecCCccCC
Confidence 99999999999999999999998764
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-42 Score=288.06 Aligned_cols=244 Identities=30% Similarity=0.454 Sum_probs=215.3
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEee-CCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCS-RNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
+|+++||||++|||++++++|+++|++|+++. |+.+..++..+++...+.++.++.+|++++++++++++++.+.+ ++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~ 80 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRL-GR 80 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc-CC
Confidence 68999999999999999999999999998875 45666777777777777789999999999999999999999998 79
Q ss_pred ccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccccccCCCCcchhhHHHHH
Q 024752 92 LNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVIAIPMCSIYASSKVAM 170 (263)
Q Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~ 170 (263)
+|++|||||.....++.+.+.++|++.+++|+.+++++++++++.|.+++ .++||++||..+..+.++...|+++|+++
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~ 160 (256)
T PRK12743 81 IDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHAL 160 (256)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHHHH
Confidence 99999999988777777889999999999999999999999999997653 58999999999988888899999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCc
Q 024752 171 NQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQ 250 (263)
Q Consensus 171 ~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~ 250 (263)
+.++++++.++.++||++++|+||+++|++...... . .........|..+..+|+|+++++.||+++...+++|+
T Consensus 161 ~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~--~---~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~ 235 (256)
T PRK12743 161 GGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDS--D---VKPDSRPGIPLGRPGDTHEIASLVAWLCSEGASYTTGQ 235 (256)
T ss_pred HHHHHHHHHHhhhhCeEEEEEEeCCccCccccccCh--H---HHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCcCCc
Confidence 999999999999999999999999999998653211 1 11223345678888999999999999999999999999
Q ss_pred EEEeCCCccccC
Q 024752 251 VICVDGGYSVTG 262 (263)
Q Consensus 251 ~i~~dgG~~~~~ 262 (263)
.+.+|||..+.+
T Consensus 236 ~~~~dgg~~~~~ 247 (256)
T PRK12743 236 SLIVDGGFMLAN 247 (256)
T ss_pred EEEECCCccccC
Confidence 999999987653
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-43 Score=293.53 Aligned_cols=241 Identities=29% Similarity=0.400 Sum_probs=206.4
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
+++++|+++||||++|||++++++|+++|++|++++|++...+ ..++.++.+|++++++++++++++.+.+
T Consensus 5 ~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (266)
T PRK06171 5 LNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ---------HENYQFVPTDVSSAEEVNHTVAEIIEKF 75 (266)
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc---------cCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 5689999999999999999999999999999999999876532 2357788999999999999999999998
Q ss_pred CCCccEEEeCCCCCCCCC---------CCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCC
Q 024752 89 DGKLNILINNAGTFIPKE---------TTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPM 159 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~---------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~ 159 (263)
+++|++|||||...... ..+.+.++|++.+++|+.+++.+++++.++|.+++.++||++||..+..+.++
T Consensus 76 -g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~ 154 (266)
T PRK06171 76 -GRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEG 154 (266)
T ss_pred -CCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCC
Confidence 89999999999764332 24578999999999999999999999999999887899999999999988889
Q ss_pred CcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCccc-CCcccccccc-------chhHHHHHHhHh--cCCCCCCCCh
Q 024752 160 CSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIR-TPLLDTVEKD-------SNFLEHANRMVL--RTPMLRPGEP 229 (263)
Q Consensus 160 ~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~-t~~~~~~~~~-------~~~~~~~~~~~~--~~~~~~~~~~ 229 (263)
...|+++|+++++++++++.|++++||+||+|+||+++ |++....... ....+....+.. ..|++++..|
T Consensus 155 ~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~ 234 (266)
T PRK06171 155 QSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSGKL 234 (266)
T ss_pred CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccCCCCCCH
Confidence 99999999999999999999999999999999999997 6654321110 011111122333 5789999999
Q ss_pred hhHHHHHHHHcCCCCCCccCcEEEeCCCcc
Q 024752 230 NEVSSVVAFLCLSATSYVTGQVICVDGGYS 259 (263)
Q Consensus 230 ~~va~~~~~l~s~~~~~~~G~~i~~dgG~~ 259 (263)
+||++++.||+++.++++||+.|.+|||++
T Consensus 235 ~eva~~~~fl~s~~~~~itG~~i~vdgg~~ 264 (266)
T PRK06171 235 SEVADLVCYLLSDRASYITGVTTNIAGGKT 264 (266)
T ss_pred HHhhhheeeeeccccccceeeEEEecCccc
Confidence 999999999999999999999999999975
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-42 Score=290.31 Aligned_cols=234 Identities=23% Similarity=0.350 Sum_probs=198.0
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
+|+++|||+ +|||++++++|+ +|++|++++|+.+.+++..+++...+.++.++.+|+++++++.++++++ +++ +++
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~-g~i 77 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTL-GPV 77 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-Hhc-CCC
Confidence 589999998 699999999996 8999999999998888887777766667889999999999999999988 456 789
Q ss_pred cEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC---------------
Q 024752 93 NILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI--------------- 157 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~--------------- 157 (263)
|++|||||+.. ..++|++.+++|+.+++++++++.|.|++ ++++|+++|..+..+.
T Consensus 78 d~li~nAG~~~-------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~ 148 (275)
T PRK06940 78 TGLVHTAGVSP-------SQASPEAILKVDLYGTALVLEEFGKVIAP--GGAGVVIASQSGHRLPALTAEQERALATTPT 148 (275)
T ss_pred CEEEECCCcCC-------chhhHHHHHHHhhHHHHHHHHHHHHHHhh--CCCEEEEEecccccCcccchhhhcccccccc
Confidence 99999999752 23679999999999999999999999975 4788999998876542
Q ss_pred ---------------CCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCC
Q 024752 158 ---------------PMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTP 222 (263)
Q Consensus 158 ---------------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~ 222 (263)
++...|++||+|++.++++++.|+.++||+||+|+||+++|++......... .+.........|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~p 227 (275)
T PRK06940 149 EELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPR-GDGYRNMFAKSP 227 (275)
T ss_pred ccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCc-hHHHHHHhhhCC
Confidence 2457899999999999999999999999999999999999998643221111 111123344578
Q ss_pred CCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCccc
Q 024752 223 MLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 223 ~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
++++.+|+|+++++.||+++.++++||+.|.+|||+..
T Consensus 228 ~~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~~~ 265 (275)
T PRK06940 228 AGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGATA 265 (275)
T ss_pred cccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCeEE
Confidence 89999999999999999999999999999999999753
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-42 Score=315.15 Aligned_cols=244 Identities=33% Similarity=0.534 Sum_probs=214.6
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
...+|+++||||++|||+++|++|+++|++|++++|+++.++++.+++ +.++..+.+|+++++++.++++++.+++
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 341 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL---GDEHLSVQADITDEAAVESAFAQIQARW- 341 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEccCCCHHHHHHHHHHHHHHc-
Confidence 457999999999999999999999999999999999988877776554 4467788999999999999999999998
Q ss_pred CCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 90 GKLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 90 ~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+++|++|||||.... .++.+.+.++|++++++|+.++++++++++|.|. +.|+||++||.++..+.++...|+++|+
T Consensus 342 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~g~iv~isS~~~~~~~~~~~~Y~asKa 419 (520)
T PRK06484 342 GRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMS--QGGVIVNLGSIASLLALPPRNAYCASKA 419 (520)
T ss_pred CCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhc--cCCEEEEECchhhcCCCCCCchhHHHHH
Confidence 899999999998743 5677889999999999999999999999999993 3689999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCcc
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~ 248 (263)
++++|+++++.|+.++||+||+|+||+|+|++......... .....+....|+++..+|+|++++++||+++.+.+++
T Consensus 420 al~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~dia~~~~~l~s~~~~~~~ 497 (520)
T PRK06484 420 AVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGR--ADFDSIRRRIPLGRLGDPEEVAEAIAFLASPAASYVN 497 (520)
T ss_pred HHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccH--HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcc
Confidence 99999999999999999999999999999998754322111 1123344567888999999999999999999899999
Q ss_pred CcEEEeCCCcccc
Q 024752 249 GQVICVDGGYSVT 261 (263)
Q Consensus 249 G~~i~~dgG~~~~ 261 (263)
|+.|.+|||+...
T Consensus 498 G~~i~vdgg~~~~ 510 (520)
T PRK06484 498 GATLTVDGGWTAF 510 (520)
T ss_pred CcEEEECCCccCC
Confidence 9999999998654
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-42 Score=285.93 Aligned_cols=251 Identities=25% Similarity=0.296 Sum_probs=218.4
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
+.+++|+++||||++|||++++++|+++|++|++++|+++..++...++...+.++.++.+|++++++++++++++.+.+
T Consensus 1 ~~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (258)
T PRK07890 1 MLLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERF 80 (258)
T ss_pred CccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence 35679999999999999999999999999999999999988888888877666778999999999999999999999998
Q ss_pred CCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 89 DGKLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 89 ~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+++|++|||||.... .++.+.+.++|++.+++|+.+++.+++++++.|.+.+ ++||++||..+..+.++...|+++|
T Consensus 81 -g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~ii~~sS~~~~~~~~~~~~Y~~sK 158 (258)
T PRK07890 81 -GRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESG-GSIVMINSMVLRHSQPKYGAYKMAK 158 (258)
T ss_pred -CCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CEEEEEechhhccCCCCcchhHHHH
Confidence 789999999998654 5677788999999999999999999999999997764 7999999999988888899999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccccc------chhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcC
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKD------SNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCL 241 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s 241 (263)
++++.++++++.|++++||++++++||+++|++....... ..............|..++.+|+|+++++.++++
T Consensus 159 ~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~ 238 (258)
T PRK07890 159 GALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASAVLFLAS 238 (258)
T ss_pred HHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999976432111 0111112333445678888999999999999999
Q ss_pred CCCCCccCcEEEeCCCcccc
Q 024752 242 SATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 242 ~~~~~~~G~~i~~dgG~~~~ 261 (263)
+...+++|+.|.+|||+..+
T Consensus 239 ~~~~~~~G~~i~~~gg~~~~ 258 (258)
T PRK07890 239 DLARAITGQTLDVNCGEYHH 258 (258)
T ss_pred HhhhCccCcEEEeCCccccC
Confidence 88889999999999998754
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-42 Score=283.91 Aligned_cols=246 Identities=28% Similarity=0.421 Sum_probs=218.1
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEE-eeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHT-CSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
+++|+++||||+++||++++++|+++|++|++ ..|+.+..+++.+++...+.++.++.+|+++++++.++++++.+.+
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 80 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEF- 80 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence 46799999999999999999999999999776 5888888888888887777788999999999999999999999988
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
+++|++|||||.....++.+.+.+++++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|+++|++
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a 160 (250)
T PRK08063 81 GRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAA 160 (250)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHHHHHH
Confidence 78999999999887778888899999999999999999999999999998888999999999888888888999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccC
Q 024752 170 MNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTG 249 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G 249 (263)
++.++++++.++.+.||++++|+||+++|++........... .......|.+++.+++|+++.+.+++++...+++|
T Consensus 161 ~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g 237 (250)
T PRK08063 161 LEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELL---EDARAKTPAGRMVEPEDVANAVLFLCSPEADMIRG 237 (250)
T ss_pred HHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHH---HHHhcCCCCCCCcCHHHHHHHHHHHcCchhcCccC
Confidence 999999999999999999999999999999875443222221 23334557777899999999999999988889999
Q ss_pred cEEEeCCCccc
Q 024752 250 QVICVDGGYSV 260 (263)
Q Consensus 250 ~~i~~dgG~~~ 260 (263)
+.+++|||.++
T Consensus 238 ~~~~~~gg~~~ 248 (250)
T PRK08063 238 QTIIVDGGRSL 248 (250)
T ss_pred CEEEECCCeee
Confidence 99999999875
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=282.53 Aligned_cols=243 Identities=27% Similarity=0.403 Sum_probs=214.2
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEe-eCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTC-SRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
+++|+++|||+++|||++++++|+++|++|++. +++....++..+++...+.++..+.+|+++.+++.++++++.+.+
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 79 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEV- 79 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh-
Confidence 568999999999999999999999999998874 556666666677776667778888999999999999999999988
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
+++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+.++...|+++|++
T Consensus 80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sK~a 159 (246)
T PRK12938 80 GEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAG 159 (246)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHHHHHH
Confidence 89999999999877667778899999999999999999999999999988877899999999988888889999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccC
Q 024752 170 MNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTG 249 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G 249 (263)
++.++++++.|+.+.||++++|+||+++|++...... . .........|..+..+++++++.+.||+++.+.+++|
T Consensus 160 ~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~g 234 (246)
T PRK12938 160 IHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRP--D---VLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFSTG 234 (246)
T ss_pred HHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcCh--H---HHHHHHhcCCccCCcCHHHHHHHHHHHcCcccCCccC
Confidence 9999999999999999999999999999998754321 1 1133334567788899999999999999998899999
Q ss_pred cEEEeCCCcc
Q 024752 250 QVICVDGGYS 259 (263)
Q Consensus 250 ~~i~~dgG~~ 259 (263)
+.+.+|||..
T Consensus 235 ~~~~~~~g~~ 244 (246)
T PRK12938 235 ADFSLNGGLH 244 (246)
T ss_pred cEEEECCccc
Confidence 9999999964
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=283.14 Aligned_cols=245 Identities=28% Similarity=0.343 Sum_probs=207.0
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeC-CchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-NETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
|.+++|+++||||++|||+++++.|++.|++|++..+ +.+..+....++ +.++.++.+|+++++++.++++++.+.
T Consensus 1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (253)
T PRK08642 1 MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL---GDRAIALQADVTDREQVQAMFATATEH 77 (253)
T ss_pred CCCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 5678999999999999999999999999999988655 444444444333 346888999999999999999999988
Q ss_pred cCCCccEEEeCCCCCC------CCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCc
Q 024752 88 FDGKLNILINNAGTFI------PKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCS 161 (263)
Q Consensus 88 ~~~~id~li~~ag~~~------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~ 161 (263)
++.++|++|||||... ..++.+.+.++|++.+++|+.++++++++++|.|.+++.++||++||.....+.++..
T Consensus 78 ~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 157 (253)
T PRK08642 78 FGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYH 157 (253)
T ss_pred hCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCcc
Confidence 8334999999998642 2346778899999999999999999999999999887779999999987776766778
Q ss_pred chhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcC
Q 024752 162 IYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCL 241 (263)
Q Consensus 162 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s 241 (263)
.|+++|++++.++++++++++++||+||+|+||+++|+....... + .....+....|+.++.+|+|+++++.||++
T Consensus 158 ~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~va~~~~~l~~ 233 (253)
T PRK08642 158 DYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATP-D---EVFDLIAATTPLRKVTTPQEFADAVLFFAS 233 (253)
T ss_pred chHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCC-H---HHHHHHHhcCCcCCCCCHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999999986543211 1 112334456788899999999999999999
Q ss_pred CCCCCccCcEEEeCCCccc
Q 024752 242 SATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 242 ~~~~~~~G~~i~~dgG~~~ 260 (263)
+.+.+++|+.|.+|||+..
T Consensus 234 ~~~~~~~G~~~~vdgg~~~ 252 (253)
T PRK08642 234 PWARAVTGQNLVVDGGLVM 252 (253)
T ss_pred chhcCccCCEEEeCCCeec
Confidence 9999999999999999764
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=284.92 Aligned_cols=247 Identities=26% Similarity=0.495 Sum_probs=215.0
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|+++++++.++++++.+.+
T Consensus 5 ~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~ 84 (264)
T PRK07576 5 FDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEF 84 (264)
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 56889999999999999999999999999999999999888877777776666667889999999999999999999887
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|+++ +|+||++||..+..+.++...|+++|+
T Consensus 85 -~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-~g~iv~iss~~~~~~~~~~~~Y~asK~ 162 (264)
T PRK07576 85 -GPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP-GASIIQISAPQAFVPMPMQAHVCAAKA 162 (264)
T ss_pred -CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCEEEEECChhhccCCCCccHHHHHHH
Confidence 789999999997766677788999999999999999999999999999765 489999999998888888999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCccc-CCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIR-TPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
+++.|+++++.|+.++||+++.|+||+++ |+............ .......|+++..+|+|+++.+.+|+++...++
T Consensus 163 a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~ 239 (264)
T PRK07576 163 GVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQ---AAVAQSVPLKRNGTKQDIANAALFLASDMASYI 239 (264)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHH---HHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCc
Confidence 99999999999999999999999999997 55433322211111 223334678888999999999999999888899
Q ss_pred cCcEEEeCCCccc
Q 024752 248 TGQVICVDGGYSV 260 (263)
Q Consensus 248 ~G~~i~~dgG~~~ 260 (263)
+|+.+.+|||+.+
T Consensus 240 ~G~~~~~~gg~~~ 252 (264)
T PRK07576 240 TGVVLPVDGGWSL 252 (264)
T ss_pred cCCEEEECCCccc
Confidence 9999999999864
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=283.78 Aligned_cols=247 Identities=25% Similarity=0.310 Sum_probs=214.5
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc-C-CceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-G-LQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
+|+++||||+++||++++++|+++|++|++++|+....++..+++... + .++.++.+|+++++++.++++++.+.+ +
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~ 80 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIF-G 80 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence 689999999999999999999999999999999988888777776543 2 468899999999999999999999988 7
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccccccCCCCcchhhHHHH
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
++|++|||||.....++.+.+.++|++.+++|+.+++++++++++.|.+++ .+++|++||..+..+.+...+|+++|++
T Consensus 81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa 160 (259)
T PRK12384 81 RVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFG 160 (259)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHHH
Confidence 999999999988877888899999999999999999999999999998776 6899999999888888888899999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEEecCcc-cCCccccccccc------hhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCC
Q 024752 170 MNQLTKNLACEWAKDKIRVNTVAPWVI-RTPLLDTVEKDS------NFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS 242 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~v~~v~PG~v-~t~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~ 242 (263)
+++++++++.|++++||+|++|+||++ .+++.....+.. ...+....+....|++++.+++|+++++.||+++
T Consensus 161 ~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~~ 240 (259)
T PRK12384 161 GVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYASP 240 (259)
T ss_pred HHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHHHHHcCc
Confidence 999999999999999999999999975 566544321110 0112223345567899999999999999999998
Q ss_pred CCCCccCcEEEeCCCccc
Q 024752 243 ATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 243 ~~~~~~G~~i~~dgG~~~ 260 (263)
.+.+++|+.+++|||..+
T Consensus 241 ~~~~~~G~~~~v~~g~~~ 258 (259)
T PRK12384 241 KASYCTGQSINVTGGQVM 258 (259)
T ss_pred ccccccCceEEEcCCEEe
Confidence 888999999999999864
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-42 Score=280.27 Aligned_cols=218 Identities=26% Similarity=0.381 Sum_probs=198.3
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
.++-|.+|++||||||++|+|+++|.+|+++|+++++.|.+.+..+++.++++..| ++....||+++++++.+..++++
T Consensus 31 ~~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~eei~~~a~~Vk 109 (300)
T KOG1201|consen 31 KPLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDREEIYRLAKKVK 109 (300)
T ss_pred cchhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCCHHHHHHHHHHHH
Confidence 35567899999999999999999999999999999999999999999999998775 89999999999999999999999
Q ss_pred hhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhh
Q 024752 86 SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYAS 165 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~ 165 (263)
++. |.+|++|||||+....++.+.+.|+++++|++|+.|+++++++++|.|.+++.|+||.++|.+|..+.++..+|++
T Consensus 110 ~e~-G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~Yca 188 (300)
T KOG1201|consen 110 KEV-GDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYCA 188 (300)
T ss_pred Hhc-CCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhhhh
Confidence 998 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHc---cCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHH
Q 024752 166 SKVAMNQLTKNLACEWA---KDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAF 238 (263)
Q Consensus 166 sK~a~~~~~~~~a~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ 238 (263)
||+|+.+|.++++.|+. +.||+...|+|+.++|.|+....+.. .+....+|+++|+.++.
T Consensus 189 SK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~~~~~~-------------~l~P~L~p~~va~~Iv~ 251 (300)
T KOG1201|consen 189 SKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDGATPFP-------------TLAPLLEPEYVAKRIVE 251 (300)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCCCCCCc-------------cccCCCCHHHHHHHHHH
Confidence 99999999999999986 46799999999999999987611111 12234567888877654
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-41 Score=282.43 Aligned_cols=246 Identities=27% Similarity=0.441 Sum_probs=218.7
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
..++++|+++||||+++||+++++.|+++|++|++++|+.+.++++..++...+.++.++.+|+++++++.++++++.+.
T Consensus 4 ~~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (258)
T PRK06949 4 SINLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETE 83 (258)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHh
Confidence 35688999999999999999999999999999999999999888888777666667889999999999999999999888
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC--------CceEEEEccccccccCCC
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG--------NGNIIFISSVAGVIAIPM 159 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--------~~~iv~vsS~~~~~~~~~ 159 (263)
+ +++|++|||+|.....++.+.+.++|+.++++|+.+++.++++++|.|.++. .+++|++||..+..+.+.
T Consensus 84 ~-~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~ 162 (258)
T PRK06949 84 A-GTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQ 162 (258)
T ss_pred c-CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCC
Confidence 7 8999999999987767777788999999999999999999999999997653 479999999998888888
Q ss_pred CcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHH
Q 024752 160 CSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFL 239 (263)
Q Consensus 160 ~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l 239 (263)
..+|+++|++++.++++++.++.++||+|++|+||+++|++........ .........|..+.+.|+|+++.+.||
T Consensus 163 ~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~p~~~~~~~~~l 238 (258)
T PRK06949 163 IGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETE----QGQKLVSMLPRKRVGKPEDLDGLLLLL 238 (258)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChH----HHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999865432211 113344456888999999999999999
Q ss_pred cCCCCCCccCcEEEeCCCc
Q 024752 240 CLSATSYVTGQVICVDGGY 258 (263)
Q Consensus 240 ~s~~~~~~~G~~i~~dgG~ 258 (263)
+++.+.+++|+.|.+|||+
T Consensus 239 ~~~~~~~~~G~~i~~dgg~ 257 (258)
T PRK06949 239 AADESQFINGAIISADDGF 257 (258)
T ss_pred hChhhcCCCCcEEEeCCCC
Confidence 9999999999999999996
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-41 Score=286.79 Aligned_cols=247 Identities=34% Similarity=0.476 Sum_probs=215.9
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCch-hHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET-ELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
.++++|++|||||++|||++++++|+++|++|++++|+.. ..+...+.+...+.++.++.+|+++++++.++++++.+.
T Consensus 42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~ 121 (290)
T PRK06701 42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRE 121 (290)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4688999999999999999999999999999999999864 345555556555667889999999999999999999998
Q ss_pred cCCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhH
Q 024752 88 FDGKLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASS 166 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s 166 (263)
+ +++|++|||||.... .++.+.+.++|.+.+++|+.+++.+++++++.|++ .++||++||..+..+.+....|+++
T Consensus 122 ~-~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~s 198 (290)
T PRK06701 122 L-GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ--GSAIINTGSITGYEGNETLIDYSAT 198 (290)
T ss_pred c-CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh--CCeEEEEecccccCCCCCcchhHHH
Confidence 8 789999999998644 56778899999999999999999999999999865 4799999999999888888999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
|++++.++++++.++.++||++++|+||+++|++....... +....+....+.+++..++|+++++++|+++.+.+
T Consensus 199 K~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~----~~~~~~~~~~~~~~~~~~~dva~~~~~ll~~~~~~ 274 (290)
T PRK06701 199 KGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDE----EKVSQFGSNTPMQRPGQPEELAPAYVFLASPDSSY 274 (290)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCH----HHHHHHHhcCCcCCCcCHHHHHHHHHHHcCcccCC
Confidence 99999999999999999999999999999999986543211 11233445668888999999999999999999999
Q ss_pred ccCcEEEeCCCccccC
Q 024752 247 VTGQVICVDGGYSVTG 262 (263)
Q Consensus 247 ~~G~~i~~dgG~~~~~ 262 (263)
++|+.|++|||...+|
T Consensus 275 ~~G~~i~idgg~~~~~ 290 (290)
T PRK06701 275 ITGQMLHVNGGVIVNG 290 (290)
T ss_pred ccCcEEEeCCCcccCC
Confidence 9999999999988776
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-41 Score=280.03 Aligned_cols=250 Identities=34% Similarity=0.496 Sum_probs=220.5
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
|++++|+++||||+++||+++++.|+++|++|++++|+++..++...++.. +.++.++.+|+++++++.++++++.+.+
T Consensus 1 ~~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (251)
T PRK07231 1 MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA-GGRAIAVAADVSDEADVEAAVAAALERF 79 (251)
T ss_pred CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 468899999999999999999999999999999999999888877777654 5568899999999999999999998887
Q ss_pred CCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 89 DGKLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 89 ~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+++|++|||+|.... .++.+.+.++|++.+++|+.+++.+++.+++.|.+++.++||++||..+..+.++...|+.+|
T Consensus 80 -~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk 158 (251)
T PRK07231 80 -GSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASK 158 (251)
T ss_pred -CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHHHH
Confidence 789999999998643 456778899999999999999999999999999988789999999999999989999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
++++.+++.++.+++++||++++++||+++|++........ ..+....+....|.+++.+|+|+++++++|+++...++
T Consensus 159 ~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~ 237 (251)
T PRK07231 159 GAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEP-TPENRAKFLATIPLGRLGTPEDIANAALFLASDEASWI 237 (251)
T ss_pred HHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhccc-ChHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccCC
Confidence 99999999999999999999999999999999876544321 11222345556788888999999999999999888899
Q ss_pred cCcEEEeCCCcccc
Q 024752 248 TGQVICVDGGYSVT 261 (263)
Q Consensus 248 ~G~~i~~dgG~~~~ 261 (263)
+|+.+.+|||..++
T Consensus 238 ~g~~~~~~gg~~~~ 251 (251)
T PRK07231 238 TGVTLVVDGGRCVG 251 (251)
T ss_pred CCCeEEECCCccCc
Confidence 99999999998653
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-44 Score=267.69 Aligned_cols=241 Identities=33% Similarity=0.397 Sum_probs=216.1
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
.++.|+++++||+.-|||+++++.|++.|++|+.+.|+++.+..+.++.. .-+.++..|+++.+.+.+.+..+
T Consensus 3 t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p---~~I~Pi~~Dls~wea~~~~l~~v---- 75 (245)
T KOG1207|consen 3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETP---SLIIPIVGDLSAWEALFKLLVPV---- 75 (245)
T ss_pred ccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCC---cceeeeEecccHHHHHHHhhccc----
Confidence 46889999999999999999999999999999999999999988887642 34788999999877777766543
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhh-CCCceEEEEccccccccCCCCcchhhHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKS-AGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+++|.++||||+....++.+++.++|++.|++|+.+.+.+.|...+-+.. ...|.||++||.++..+..+...|+++|
T Consensus 76 -~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYcatK 154 (245)
T KOG1207|consen 76 -FPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCATK 154 (245)
T ss_pred -CchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEeecH
Confidence 68999999999999999999999999999999999999999997765553 4468999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
+|+++++|+++.|+++++||||++.|-.|.|.|.+..-.++.-. ..+..+.|++++...+||.+++.||+|+.++..
T Consensus 155 aALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~---k~mL~riPl~rFaEV~eVVnA~lfLLSd~ssmt 231 (245)
T KOG1207|consen 155 AALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKK---KKMLDRIPLKRFAEVDEVVNAVLFLLSDNSSMT 231 (245)
T ss_pred HHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhc---cchhhhCchhhhhHHHHHHhhheeeeecCcCcc
Confidence 99999999999999999999999999999999987765544322 566778899999999999999999999999999
Q ss_pred cCcEEEeCCCccc
Q 024752 248 TGQVICVDGGYSV 260 (263)
Q Consensus 248 ~G~~i~~dgG~~~ 260 (263)
||.++.++||++.
T Consensus 232 tGstlpveGGfs~ 244 (245)
T KOG1207|consen 232 TGSTLPVEGGFSN 244 (245)
T ss_pred cCceeeecCCccC
Confidence 9999999999975
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-41 Score=280.93 Aligned_cols=246 Identities=27% Similarity=0.326 Sum_probs=212.2
Q ss_pred ccccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHH
Q 024752 5 REQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 5 ~~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 84 (263)
..++.+++||+++||||+++||++++++|+++|++|++++|+..+.++..+++ +.++.++++|+++++++.++++++
T Consensus 2 ~~~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~ 78 (255)
T PRK05717 2 SEPNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL---GENAWFIAMDVADEAQVAAGVAEV 78 (255)
T ss_pred CCCCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHH
Confidence 35778899999999999999999999999999999999999887666554433 456888999999999999999999
Q ss_pred HhhcCCCccEEEeCCCCCCC--CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcc
Q 024752 85 SSQFDGKLNILINNAGTFIP--KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSI 162 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~ 162 (263)
.+.+ +++|++|||||.... .++.+.+.++|++.+++|+.+++.+++++.|.|.++ .++||++||..+..+.+....
T Consensus 79 ~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~ii~~sS~~~~~~~~~~~~ 156 (255)
T PRK05717 79 LGQF-GRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH-NGAIVNLASTRARQSEPDTEA 156 (255)
T ss_pred HHHh-CCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CcEEEEEcchhhcCCCCCCcc
Confidence 9988 799999999998754 456678999999999999999999999999999765 489999999999988888999
Q ss_pred hhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCC
Q 024752 163 YASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS 242 (263)
Q Consensus 163 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~ 242 (263)
|+++|++++.++++++.++.+ +|+|++|+||+++|++...... .... .......|.++..+|+|+++.+.+++++
T Consensus 157 Y~~sKaa~~~~~~~la~~~~~-~i~v~~i~Pg~i~t~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~va~~~~~l~~~ 231 (255)
T PRK05717 157 YAASKGGLLALTHALAISLGP-EIRVNAVSPGWIDARDPSQRRA-EPLS---EADHAQHPAGRVGTVEDVAAMVAWLLSR 231 (255)
T ss_pred hHHHHHHHHHHHHHHHHHhcC-CCEEEEEecccCcCCccccccc-hHHH---HHHhhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 999999999999999999987 5999999999999987543211 1111 2222356788999999999999999998
Q ss_pred CCCCccCcEEEeCCCccc
Q 024752 243 ATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 243 ~~~~~~G~~i~~dgG~~~ 260 (263)
...+++|+.+.+|||+..
T Consensus 232 ~~~~~~g~~~~~~gg~~~ 249 (255)
T PRK05717 232 QAGFVTGQEFVVDGGMTR 249 (255)
T ss_pred hhcCccCcEEEECCCceE
Confidence 888999999999999764
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-41 Score=278.40 Aligned_cols=233 Identities=23% Similarity=0.331 Sum_probs=199.6
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
+|+++||||++|||++++++|+++|++|++++|+++... +++...+ +.++.+|+++++++.++++++.+.+ +++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~-~~i 75 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQAG--AQCIQADFSTNAGIMAFIDELKQHT-DGL 75 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHcC--CEEEEcCCCCHHHHHHHHHHHHhhC-CCc
Confidence 589999999999999999999999999999999876543 3333322 5778999999999999999999988 789
Q ss_pred cEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC--CceEEEEccccccccCCCCcchhhHHHHH
Q 024752 93 NILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG--NGNIIFISSVAGVIAIPMCSIYASSKVAM 170 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~ 170 (263)
|++|||||........+.+.++|++.+++|+.+++.++++++|.|++.+ .++||++||..+..+.++...|+++|+++
T Consensus 76 d~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaal 155 (236)
T PRK06483 76 RAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAAL 155 (236)
T ss_pred cEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHHH
Confidence 9999999987665566778999999999999999999999999998765 68999999999888888899999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCc
Q 024752 171 NQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQ 250 (263)
Q Consensus 171 ~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~ 250 (263)
++|+++++.|+++ +||||+|+||++.|+... .+.. ........|+++...|+|+++.+.||++ +.++||+
T Consensus 156 ~~l~~~~a~e~~~-~irvn~v~Pg~~~~~~~~----~~~~---~~~~~~~~~~~~~~~~~~va~~~~~l~~--~~~~~G~ 225 (236)
T PRK06483 156 DNMTLSFAAKLAP-EVKVNSIAPALILFNEGD----DAAY---RQKALAKSLLKIEPGEEEIIDLVDYLLT--SCYVTGR 225 (236)
T ss_pred HHHHHHHHHHHCC-CcEEEEEccCceecCCCC----CHHH---HHHHhccCccccCCCHHHHHHHHHHHhc--CCCcCCc
Confidence 9999999999988 599999999999875321 1111 1233345678888999999999999997 5789999
Q ss_pred EEEeCCCcccc
Q 024752 251 VICVDGGYSVT 261 (263)
Q Consensus 251 ~i~~dgG~~~~ 261 (263)
.|.+|||..++
T Consensus 226 ~i~vdgg~~~~ 236 (236)
T PRK06483 226 SLPVDGGRHLK 236 (236)
T ss_pred EEEeCcccccC
Confidence 99999998763
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-41 Score=279.58 Aligned_cols=244 Identities=32% Similarity=0.460 Sum_probs=211.6
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
++++|+++||||+++||++++++|+++|++|++++|+.+..++..+++ +.++.++.+|+++.+++..+++.+.+.+
T Consensus 3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 78 (249)
T PRK06500 3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL---GESALVIRADAGDVAAQKALAQALAEAF- 78 (249)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh-
Confidence 367899999999999999999999999999999999987766655544 4567889999999999999999999987
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
+++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|.|.+ .+++|+++|..+..+.+....|+++|++
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~i~~~S~~~~~~~~~~~~Y~~sK~a 156 (249)
T PRK06500 79 GRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN--PASIVLNGSINAHIGMPNSSVYAASKAA 156 (249)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEechHhccCCCCccHHHHHHHH
Confidence 78999999999887777778899999999999999999999999999865 4789999998888888889999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEEecCcccCCcccccccc-chhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCcc
Q 024752 170 MNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKD-SNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~ 248 (263)
++.++++++.|+.++||++++|+||+++|++....... ..............|+.++.+|+|+++++.+|+++.+.+++
T Consensus 157 ~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~ 236 (249)
T PRK06500 157 LLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLASDESAFIV 236 (249)
T ss_pred HHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcc
Confidence 99999999999999999999999999999986543211 11122223334456888889999999999999998889999
Q ss_pred CcEEEeCCCcc
Q 024752 249 GQVICVDGGYS 259 (263)
Q Consensus 249 G~~i~~dgG~~ 259 (263)
|+.|.+|||.+
T Consensus 237 g~~i~~~gg~~ 247 (249)
T PRK06500 237 GSEIIVDGGMS 247 (249)
T ss_pred CCeEEECCCcc
Confidence 99999999964
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-41 Score=281.71 Aligned_cols=248 Identities=30% Similarity=0.357 Sum_probs=212.2
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
+++++|+++||||++|||++++++|+++|++|++++|+++.. +..+++...+.++.++.+|+++++++.++++++.+.+
T Consensus 3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK08628 3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF 81 (258)
T ss_pred CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence 679999999999999999999999999999999999998776 6667776667778999999999999999999999988
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+++|++|||||......+.+.+ ++|++.+++|+.+++.+++.++|.|++. .++||++||..+..+.++...|++||+
T Consensus 82 -~~id~vi~~ag~~~~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 158 (258)
T PRK08628 82 -GRIDGLVNNAGVNDGVGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKAS-RGAIVNISSKTALTGQGGTSGYAAAKG 158 (258)
T ss_pred -CCCCEEEECCcccCCCcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcEEEEECCHHhccCCCCCchhHHHHH
Confidence 7999999999976554554444 9999999999999999999999998765 489999999999988888999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccccc-chhHHHHHHhHhcCCCC-CCCChhhHHHHHHHHcCCCCCC
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKD-SNFLEHANRMVLRTPML-RPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~va~~~~~l~s~~~~~ 246 (263)
+++.++++++.|+.++||+++.|+||+++|++....... ..............|.. +..+|+|+++.+.+++++...+
T Consensus 159 a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~ 238 (258)
T PRK08628 159 AQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLSERSSH 238 (258)
T ss_pred HHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHHHHhChhhcc
Confidence 999999999999999999999999999999986542211 11111112223344553 6789999999999999998889
Q ss_pred ccCcEEEeCCCccc
Q 024752 247 VTGQVICVDGGYSV 260 (263)
Q Consensus 247 ~~G~~i~~dgG~~~ 260 (263)
++|+.+.+|||++.
T Consensus 239 ~~g~~~~~~gg~~~ 252 (258)
T PRK08628 239 TTGQWLFVDGGYVH 252 (258)
T ss_pred ccCceEEecCCccc
Confidence 99999999999764
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-41 Score=278.26 Aligned_cols=247 Identities=29% Similarity=0.416 Sum_probs=221.4
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
++++|+++|||++++||+++++.|+++|++|++++|++++.++..+++...+.++.++.+|+++++++.++++++.+.+
T Consensus 4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~- 82 (250)
T PRK12939 4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAAL- 82 (250)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-
Confidence 4678999999999999999999999999999999999988888888877666678999999999999999999999988
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
+++|++|||+|.....++.+.+.+++++.+++|+.+++.+++++.|.|.+++.+++|++||..+..+.+....|+++|++
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~~ 162 (250)
T PRK12939 83 GGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGA 162 (250)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchHHHHHHH
Confidence 78999999999887777778899999999999999999999999999988778999999999998888888999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccC
Q 024752 170 MNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTG 249 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G 249 (263)
++.+++.++.++.+.+|+++.|+||+++|++....... .. ...+....|..++.+++|+++++++++++..++++|
T Consensus 163 ~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G 238 (250)
T PRK12939 163 VIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPAD-ER---HAYYLKGRALERLQVPDDVAGAVLFLLSDAARFVTG 238 (250)
T ss_pred HHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCCh-HH---HHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCccC
Confidence 99999999999999999999999999999987653321 11 133444567888899999999999999988889999
Q ss_pred cEEEeCCCcccc
Q 024752 250 QVICVDGGYSVT 261 (263)
Q Consensus 250 ~~i~~dgG~~~~ 261 (263)
+.|.+|||..++
T Consensus 239 ~~i~~~gg~~~~ 250 (250)
T PRK12939 239 QLLPVNGGFVMN 250 (250)
T ss_pred cEEEECCCcccC
Confidence 999999998764
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-41 Score=278.71 Aligned_cols=249 Identities=28% Similarity=0.403 Sum_probs=221.0
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
+++|+++||||+++||++++++|+++|++|++++|+.+..++..+++...+.++.++.+|++++++++++++.+.+.+ +
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~ 79 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQAL-G 79 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence 578999999999999999999999999999999999988888877777666778999999999999999999999887 7
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHH
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAM 170 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~ 170 (263)
++|++|||+|.....++.+.+.+++++.+++|+.+++++++++++.|++.+.+++|++||..+..+.++...|+.+|+++
T Consensus 80 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~sK~a~ 159 (250)
T TIGR03206 80 PVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGL 159 (250)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHHHHHH
Confidence 89999999998766677778899999999999999999999999999888788999999999998888999999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEEecCcccCCccccccccc-hhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccC
Q 024752 171 NQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDS-NFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTG 249 (263)
Q Consensus 171 ~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G 249 (263)
+.++++++.++.+.|++++.++||+++|++........ ........+....|.++...++|+++++.+++++...+++|
T Consensus 160 ~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g 239 (250)
T TIGR03206 160 VAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSSDDASFITG 239 (250)
T ss_pred HHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcccCCCcC
Confidence 99999999999988999999999999999876543211 11112244555678888899999999999999999999999
Q ss_pred cEEEeCCCccc
Q 024752 250 QVICVDGGYSV 260 (263)
Q Consensus 250 ~~i~~dgG~~~ 260 (263)
+.+.+|||..+
T Consensus 240 ~~~~~~~g~~~ 250 (250)
T TIGR03206 240 QVLSVSGGLTM 250 (250)
T ss_pred cEEEeCCCccC
Confidence 99999999753
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-41 Score=287.52 Aligned_cols=246 Identities=26% Similarity=0.358 Sum_probs=210.6
Q ss_pred cccccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCC-chhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHH
Q 024752 4 FREQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN-ETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLME 82 (263)
Q Consensus 4 ~~~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 82 (263)
-+.+..++++|+++||||++|||++++++|+++|++|++.+++ ....++..+++...+.++.++.+|+++++++.++++
T Consensus 3 ~~~~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~ 82 (306)
T PRK07792 3 RTTNTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVA 82 (306)
T ss_pred cccCCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH
Confidence 3456788999999999999999999999999999999999875 445667777787777788999999999999999999
Q ss_pred HHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-------CCceEEEEccccccc
Q 024752 83 TVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-------GNGNIIFISSVAGVI 155 (263)
Q Consensus 83 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-------~~~~iv~vsS~~~~~ 155 (263)
++.+ + +++|++|||||+.....+.+.+.++|++.+++|+.++++++++++|+|+++ ..|+||++||..+..
T Consensus 83 ~~~~-~-g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 160 (306)
T PRK07792 83 TAVG-L-GGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLV 160 (306)
T ss_pred HHHH-h-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccccc
Confidence 9988 7 899999999999877777888999999999999999999999999999753 137999999999988
Q ss_pred cCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHH
Q 024752 156 AIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSV 235 (263)
Q Consensus 156 ~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~ 235 (263)
+.++...|+++|+++++|+++++.|+.++||+||+|+|| +.|++......... .... ....+.+|+++++.
T Consensus 161 ~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg-~~t~~~~~~~~~~~-----~~~~---~~~~~~~pe~va~~ 231 (306)
T PRK07792 161 GPVGQANYGAAKAGITALTLSAARALGRYGVRANAICPR-ARTAMTADVFGDAP-----DVEA---GGIDPLSPEHVVPL 231 (306)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCC-CCCchhhhhccccc-----hhhh---hccCCCCHHHHHHH
Confidence 888889999999999999999999999999999999999 48887543321110 0000 11223579999999
Q ss_pred HHHHcCCCCCCccCcEEEeCCCccc
Q 024752 236 VAFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 236 ~~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
+.||+++.+.+++|+.+.+|||...
T Consensus 232 v~~L~s~~~~~~tG~~~~v~gg~~~ 256 (306)
T PRK07792 232 VQFLASPAAAEVNGQVFIVYGPMVT 256 (306)
T ss_pred HHHHcCccccCCCCCEEEEcCCeEE
Confidence 9999999888999999999999743
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-41 Score=279.63 Aligned_cols=242 Identities=26% Similarity=0.361 Sum_probs=212.6
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
+++++|+++|||++++||++++++|+++|++|++++|+. +...+.++.++++|+++++++.++++++.+.+
T Consensus 4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 74 (252)
T PRK08220 4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQEDYPFATFVLDVSDAAAVAQVCQRLLAET 74 (252)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 678999999999999999999999999999999999986 12234568889999999999999999999988
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+++|++|||+|.....++.+.+.+++++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|+++|+
T Consensus 75 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~ 153 (252)
T PRK08220 75 -GPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKA 153 (252)
T ss_pred -CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHHHHH
Confidence 8999999999988777788889999999999999999999999999999887899999999998888888899999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchh-----HHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNF-----LEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
+++.++++++.|+.++||+|+.+.||+++|++.......... ......+....|..++..|+|+++++.||+++.
T Consensus 154 a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 233 (252)
T PRK08220 154 ALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLFLASDL 233 (252)
T ss_pred HHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHHHHHHhcch
Confidence 999999999999999999999999999999986543221110 111123344568888999999999999999999
Q ss_pred CCCccCcEEEeCCCccc
Q 024752 244 TSYVTGQVICVDGGYSV 260 (263)
Q Consensus 244 ~~~~~G~~i~~dgG~~~ 260 (263)
..+++|+.+.+|||.++
T Consensus 234 ~~~~~g~~i~~~gg~~~ 250 (252)
T PRK08220 234 ASHITLQDIVVDGGATL 250 (252)
T ss_pred hcCccCcEEEECCCeec
Confidence 99999999999999765
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=278.35 Aligned_cols=248 Identities=32% Similarity=0.484 Sum_probs=217.7
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
.-+++++|+++||||+++||.+++++|+++|++|++++|+.+.++...+++...+.++.++.+|++++++++++++++.+
T Consensus 6 ~~~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~ 85 (259)
T PRK08213 6 ELFDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLE 85 (259)
T ss_pred hhhCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999888888877776667788999999999999999999999
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHH-HhhCCCceEEEEccccccccCCC----Cc
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPL-LKSAGNGNIIFISSVAGVIAIPM----CS 161 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~~~~~~~iv~vsS~~~~~~~~~----~~ 161 (263)
.+ +++|++|||||.....+..+.+.+.|++.+++|+.+++++++++.++ |.+++.+++|++||..+..+.+. ..
T Consensus 86 ~~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~ 164 (259)
T PRK08213 86 RF-GHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTI 164 (259)
T ss_pred Hh-CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcc
Confidence 87 78999999999876666777889999999999999999999999998 77766789999999877765543 47
Q ss_pred chhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcC
Q 024752 162 IYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCL 241 (263)
Q Consensus 162 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s 241 (263)
.|+++|++++.++++++.++.++||+++.++||+++|++...... ..........|..++++++|+++.+.+|++
T Consensus 165 ~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~va~~~~~l~~ 239 (259)
T PRK08213 165 AYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLE-----RLGEDLLAHTPLGRLGDDEDLKGAALLLAS 239 (259)
T ss_pred hHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhH-----HHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 899999999999999999999999999999999999987654321 112334456788888999999999999999
Q ss_pred CCCCCccCcEEEeCCCccc
Q 024752 242 SATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 242 ~~~~~~~G~~i~~dgG~~~ 260 (263)
+.+.+++|+.|.+|||.++
T Consensus 240 ~~~~~~~G~~~~~~~~~~~ 258 (259)
T PRK08213 240 DASKHITGQILAVDGGVSA 258 (259)
T ss_pred ccccCccCCEEEECCCeec
Confidence 9999999999999999764
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=279.21 Aligned_cols=248 Identities=30% Similarity=0.478 Sum_probs=218.2
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
.+++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++...+.++.++.+|+++++++.++++++.+.
T Consensus 5 ~~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 84 (263)
T PRK07814 5 RFRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEA 84 (263)
T ss_pred cccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 34688999999999999999999999999999999999998888888777666667888999999999999999999998
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhh-CCCceEEEEccccccccCCCCcchhhH
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKS-AGNGNIIFISSVAGVIAIPMCSIYASS 166 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~iv~vsS~~~~~~~~~~~~Y~~s 166 (263)
+ +++|++|||||.....++.+.+.+++++.+++|+.+++.+.+++.|.|.+ .+.++||++||..+..+.++...|+++
T Consensus 85 ~-~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~s 163 (263)
T PRK07814 85 F-GRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTA 163 (263)
T ss_pred c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHHH
Confidence 8 79999999999876677778899999999999999999999999999987 467899999999999888899999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
|++++.++++++.|+.+ +|++++|+||++.|++........... .......|..+..+++|+++.++|++++...+
T Consensus 164 K~a~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~ 239 (263)
T PRK07814 164 KAALAHYTRLAALDLCP-RIRVNAIAPGSILTSALEVVAANDELR---APMEKATPLRRLGDPEDIAAAAVYLASPAGSY 239 (263)
T ss_pred HHHHHHHHHHHHHHHCC-CceEEEEEeCCCcCchhhhccCCHHHH---HHHHhcCCCCCCcCHHHHHHHHHHHcCccccC
Confidence 99999999999999987 699999999999999765332222221 33334457777889999999999999998889
Q ss_pred ccCcEEEeCCCccc
Q 024752 247 VTGQVICVDGGYSV 260 (263)
Q Consensus 247 ~~G~~i~~dgG~~~ 260 (263)
++|+.+.+|||...
T Consensus 240 ~~g~~~~~~~~~~~ 253 (263)
T PRK07814 240 LTGKTLEVDGGLTF 253 (263)
T ss_pred cCCCEEEECCCccC
Confidence 99999999999764
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-41 Score=278.65 Aligned_cols=242 Identities=31% Similarity=0.379 Sum_probs=210.0
Q ss_pred CCCCCCEEEEecCCC--chHHHHHHHHHHCCCeEEEeeCC-----------chhHHHHHHHHHhcCCceEEEeccCCCHH
Q 024752 9 WSLKGMTALVTGGTK--GIGYAVVEELAAFGAIVHTCSRN-----------ETELNQRIQEWKSKGLQVSGSVCDLKIRA 75 (263)
Q Consensus 9 ~~~~~k~vlVtGas~--giG~~~a~~l~~~g~~V~~~~r~-----------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 75 (263)
+++++|+++||||++ |||.+++++|+++|++|++++|+ ........+++...+.++.++.+|+++++
T Consensus 1 ~~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 80 (256)
T PRK12748 1 LPLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPY 80 (256)
T ss_pred CCCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence 467899999999995 99999999999999999999987 22222244555555667899999999999
Q ss_pred HHHHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccc
Q 024752 76 QREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVI 155 (263)
Q Consensus 76 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~ 155 (263)
++.++++++.+.+ +++|++|||||+....++.+.+.+++++.+++|+.+++++++++++.|.++..++||++||..+..
T Consensus 81 ~~~~~~~~~~~~~-g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~ 159 (256)
T PRK12748 81 APNRVFYAVSERL-GDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLG 159 (256)
T ss_pred HHHHHHHHHHHhC-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccC
Confidence 9999999999998 789999999998777777888999999999999999999999999999887778999999998888
Q ss_pred cCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHH
Q 024752 156 AIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSV 235 (263)
Q Consensus 156 ~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~ 235 (263)
+.++...|+++|++++.++++++.|+.+.||+|+.|+||+++|++.... . ........+..+...|+|+++.
T Consensus 160 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~-----~---~~~~~~~~~~~~~~~~~~~a~~ 231 (256)
T PRK12748 160 PMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEE-----L---KHHLVPKFPQGRVGEPVDAARL 231 (256)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChh-----H---HHhhhccCCCCCCcCHHHHHHH
Confidence 8888899999999999999999999999999999999999999875321 1 1222334566777889999999
Q ss_pred HHHHcCCCCCCccCcEEEeCCCcc
Q 024752 236 VAFLCLSATSYVTGQVICVDGGYS 259 (263)
Q Consensus 236 ~~~l~s~~~~~~~G~~i~~dgG~~ 259 (263)
+.+|+++.+..++|+.+.+|||++
T Consensus 232 ~~~l~~~~~~~~~g~~~~~d~g~~ 255 (256)
T PRK12748 232 IAFLVSEEAKWITGQVIHSEGGFS 255 (256)
T ss_pred HHHHhCcccccccCCEEEecCCcc
Confidence 999999988899999999999975
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-40 Score=277.40 Aligned_cols=250 Identities=30% Similarity=0.409 Sum_probs=218.6
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
|++++|+++||||+++||++++++|+++|++|++++|+.+..++..+++. .+.++.++.+|++|+++++++++++.+.+
T Consensus 1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~ 79 (252)
T PRK06138 1 MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA-AGGRAFARQGDVGSAEAVEALVDFVAARW 79 (252)
T ss_pred CCCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 57899999999999999999999999999999999999888777776665 45668899999999999999999999988
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+++|++|||+|.....++.+.+.+++++.+++|+.+++.+++.+++.|++++.++|+++||..+..+.++...|+.+|+
T Consensus 80 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~ 158 (252)
T PRK06138 80 -GRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKG 158 (252)
T ss_pred -CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHHHHH
Confidence 7999999999988777777889999999999999999999999999999887899999999999888888999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHH-HHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLE-HANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
+++.++++++.|+.+.|+++++++||+++|++............ .........|..++.+++|+++.+++++++...++
T Consensus 159 a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~ 238 (252)
T PRK06138 159 AIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLASDESSFA 238 (252)
T ss_pred HHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCc
Confidence 99999999999999999999999999999998765432211111 11222223466668899999999999999888899
Q ss_pred cCcEEEeCCCccc
Q 024752 248 TGQVICVDGGYSV 260 (263)
Q Consensus 248 ~G~~i~~dgG~~~ 260 (263)
+|+.+.+|||++.
T Consensus 239 ~g~~~~~~~g~~~ 251 (252)
T PRK06138 239 TGTTLVVDGGWLA 251 (252)
T ss_pred cCCEEEECCCeec
Confidence 9999999999864
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=275.64 Aligned_cols=243 Identities=30% Similarity=0.453 Sum_probs=214.0
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc-hhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE-TELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
|++++|+++||||+++||+++++.|+++|++|+++.|+. ...++..+++...+.++.++.+|++++++++++++++.+.
T Consensus 1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (245)
T PRK12937 1 MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETA 80 (245)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 568899999999999999999999999999998877754 3455666667666778899999999999999999999999
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+ +++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|.|.+ .++||++||..+..+.++...|+++|
T Consensus 81 ~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~Y~~sK 157 (245)
T PRK12937 81 F-GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ--GGRIINLSTSVIALPLPGYGPYAASK 157 (245)
T ss_pred c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc--CcEEEEEeeccccCCCCCCchhHHHH
Confidence 8 89999999999877777778899999999999999999999999999865 58999999999888888999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
++++.++++++.|+.+.||+++.|+||+++|++....... +....+....|..++.+++|+++.+.||+++.+.++
T Consensus 158 ~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~ 233 (245)
T PRK12937 158 AAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSA----EQIDQLAGLAPLERLGTPEEIAAAVAFLAGPDGAWV 233 (245)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCH----HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCc
Confidence 9999999999999999999999999999999986432111 122445556788899999999999999999988899
Q ss_pred cCcEEEeCCCc
Q 024752 248 TGQVICVDGGY 258 (263)
Q Consensus 248 ~G~~i~~dgG~ 258 (263)
+|+.+++|||.
T Consensus 234 ~g~~~~~~~g~ 244 (245)
T PRK12937 234 NGQVLRVNGGF 244 (245)
T ss_pred cccEEEeCCCC
Confidence 99999999986
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=276.49 Aligned_cols=246 Identities=31% Similarity=0.460 Sum_probs=218.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
|+++|||++++||++++++|+++|++|++++|+.+..++..+++...+.++.++.+|+++++++.++++++.+.+ +++|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~-~~id 79 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKF-GGFD 79 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CCCC
Confidence 689999999999999999999999999999999888888888887777778999999999999999999999988 7899
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccccccCCCCcchhhHHHHHHH
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVIAIPMCSIYASSKVAMNQ 172 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~ 172 (263)
++|||||.....++.+.+.++|++.+++|+.+++.+++.+++.|++++ .+++|++||..+..+.+....|+++|++++.
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~ 159 (254)
T TIGR02415 80 VMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRG 159 (254)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHHHHH
Confidence 999999998777788899999999999999999999999999998764 4799999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEEecCcccCCccccccccc------hhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 173 LTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDS------NFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 173 ~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
++++++.|+.+.||+++.|+||+++|++........ ........+....|.+++.+|+|+++++.||+++...+
T Consensus 160 ~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~ 239 (254)
T TIGR02415 160 LTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLASEDSDY 239 (254)
T ss_pred HHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHHHHHHhhcccccCC
Confidence 999999999999999999999999999865432211 11111233445678888999999999999999999999
Q ss_pred ccCcEEEeCCCccc
Q 024752 247 VTGQVICVDGGYSV 260 (263)
Q Consensus 247 ~~G~~i~~dgG~~~ 260 (263)
++|+.+.+|||...
T Consensus 240 ~~g~~~~~d~g~~~ 253 (254)
T TIGR02415 240 ITGQSILVDGGMVY 253 (254)
T ss_pred ccCcEEEecCCccC
Confidence 99999999999754
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-41 Score=281.62 Aligned_cols=238 Identities=24% Similarity=0.295 Sum_probs=207.5
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchh-------HHHHHHHHHhcCCceEEEeccCCCHHHHHHHH
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-------LNQRIQEWKSKGLQVSGSVCDLKIRAQREKLM 81 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 81 (263)
+++++|+++||||++|||+++++.|+++|++|++++|+.+. +++..+++...+.++.++.+|+++++++.+++
T Consensus 2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~ 81 (273)
T PRK08278 2 MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAV 81 (273)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHH
Confidence 45789999999999999999999999999999999998653 44555666666678899999999999999999
Q ss_pred HHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC--CC
Q 024752 82 ETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI--PM 159 (263)
Q Consensus 82 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~--~~ 159 (263)
+++.+.+ +++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+. ++
T Consensus 82 ~~~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 160 (273)
T PRK08278 82 AKAVERF-GGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAP 160 (273)
T ss_pred HHHHHHh-CCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccccCC
Confidence 9998888 79999999999887777888899999999999999999999999999998877899999998877766 78
Q ss_pred CcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecC-cccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHH
Q 024752 160 CSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPW-VIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAF 238 (263)
Q Consensus 160 ~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ 238 (263)
...|++||++++.++++++.|+.++||+||+|+|| +++|++....... ..+..+..+|+++++.+++
T Consensus 161 ~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~~------------~~~~~~~~~p~~va~~~~~ 228 (273)
T PRK08278 161 HTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLGG------------DEAMRRSRTPEIMADAAYE 228 (273)
T ss_pred cchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhcccc------------cccccccCCHHHHHHHHHH
Confidence 89999999999999999999999999999999999 5888765443211 1234567789999999999
Q ss_pred HcCCCCCCccCcEEEeCCCccc
Q 024752 239 LCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 239 l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
++++..++++|+.+ +|+++..
T Consensus 229 l~~~~~~~~~G~~~-~~~~~~~ 249 (273)
T PRK08278 229 ILSRPAREFTGNFL-IDEEVLR 249 (273)
T ss_pred HhcCccccceeEEE-eccchhh
Confidence 99998889999988 6877643
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-40 Score=275.49 Aligned_cols=236 Identities=32% Similarity=0.458 Sum_probs=208.6
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEeeCC-chhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCccE
Q 024752 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRN-ETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNI 94 (263)
Q Consensus 16 vlVtGas~giG~~~a~~l~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 94 (263)
++||||++|||+++++.|+++|++|++++|. .+..++..+++.+.+.++.++.+|+++++++.++++++.+.+ +++|+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i~~ 79 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEH-GAYYG 79 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHc-CCCCE
Confidence 5899999999999999999999999888765 455667777777667789999999999999999999988887 78999
Q ss_pred EEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHh-HHHhhCCCceEEEEccccccccCCCCcchhhHHHHHHHH
Q 024752 95 LINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAH-PLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQL 173 (263)
Q Consensus 95 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~-~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~ 173 (263)
+|||+|.....++.+.+.++|++.+++|+.++++++++++ |.+++++.++||++||..+..+.++...|+++|++++.+
T Consensus 80 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~ 159 (239)
T TIGR01831 80 VVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGA 159 (239)
T ss_pred EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHHHHHH
Confidence 9999998877777778999999999999999999999875 555656678999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCcEEE
Q 024752 174 TKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVIC 253 (263)
Q Consensus 174 ~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~ 253 (263)
+++++.|+.++||++++|+||+++|++...... .........|+++..+|+|+++.+.||+++.+.+++|+.+.
T Consensus 160 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~ 233 (239)
T TIGR01831 160 TKALAVELAKRKITVNCIAPGLIDTEMLAEVEH------DLDEALKTVPMNRMGQPAEVASLAGFLMSDGASYVTRQVIS 233 (239)
T ss_pred HHHHHHHHhHhCeEEEEEEEccCccccchhhhH------HHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCccCCEEE
Confidence 999999999999999999999999998764321 11333446788999999999999999999999999999999
Q ss_pred eCCCc
Q 024752 254 VDGGY 258 (263)
Q Consensus 254 ~dgG~ 258 (263)
+|||.
T Consensus 234 ~~gg~ 238 (239)
T TIGR01831 234 VNGGM 238 (239)
T ss_pred ecCCc
Confidence 99995
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=277.36 Aligned_cols=248 Identities=26% Similarity=0.419 Sum_probs=199.8
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCC----chhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHH
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN----ETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 84 (263)
+++++|+++||||++|||+++++.|+++|++|++++++ .+..++..+++...+.++.++++|++++++++++++++
T Consensus 4 ~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~ 83 (257)
T PRK12744 4 HSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDA 83 (257)
T ss_pred CCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHH
Confidence 34679999999999999999999999999997776643 34455556666555667888999999999999999999
Q ss_pred HhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchh
Q 024752 85 SSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYA 164 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~ 164 (263)
.+.+ +++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|.|++ .+++++++|.......+....|+
T Consensus 84 ~~~~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~~~iv~~~ss~~~~~~~~~~~Y~ 160 (257)
T PRK12744 84 KAAF-GRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND--NGKIVTLVTSLLGAFTPFYSAYA 160 (257)
T ss_pred HHhh-CCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc--CCCEEEEecchhcccCCCcccch
Confidence 9988 79999999999877777778899999999999999999999999999865 46777764333323456788999
Q ss_pred hHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCC--CCCChhhHHHHHHHHcCC
Q 024752 165 SSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPML--RPGEPNEVSSVVAFLCLS 242 (263)
Q Consensus 165 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~va~~~~~l~s~ 242 (263)
++|+|++.|+++++.|+.++||+|++++||++.|++......... ...........|.. +..+|+|+++++.||+++
T Consensus 161 ~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 239 (257)
T PRK12744 161 GSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEA-VAYHKTAAALSPFSKTGLTDIEDIVPFIRFLVTD 239 (257)
T ss_pred hhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccch-hhcccccccccccccCCCCCHHHHHHHHHHhhcc
Confidence 999999999999999999999999999999999997643221111 00001111123333 678899999999999996
Q ss_pred CCCCccCcEEEeCCCcccc
Q 024752 243 ATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 243 ~~~~~~G~~i~~dgG~~~~ 261 (263)
..+++|+.+.+|||+.++
T Consensus 240 -~~~~~g~~~~~~gg~~~~ 257 (257)
T PRK12744 240 -GWWITGQTILINGGYTTK 257 (257)
T ss_pred -cceeecceEeecCCccCC
Confidence 578999999999998753
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=283.11 Aligned_cols=238 Identities=23% Similarity=0.281 Sum_probs=208.3
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
+..++++|+++||||++|||+++++.|+++|++|++++|+.+.++++.+++.. +.++..+.+|++++++++++++++.+
T Consensus 3 ~~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~ 81 (296)
T PRK05872 3 PMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG-DDRVLTVVADVTDLAAMQAAAEEAVE 81 (296)
T ss_pred CCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC-CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 44578999999999999999999999999999999999999988888777643 45577778999999999999999999
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhH
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASS 166 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s 166 (263)
.+ +++|++|||||+....++.+.+.++|++.+++|+.++++++++++|.|.++ .|+||++||..+..+.++...|++|
T Consensus 82 ~~-g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~as 159 (296)
T PRK05872 82 RF-GGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGYVLQVSSLAAFAAAPGMAAYCAS 159 (296)
T ss_pred Hc-CCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCEEEEEeCHhhcCCCCCchHHHHH
Confidence 88 799999999999887888889999999999999999999999999999775 4899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhc--CCCCCCCChhhHHHHHHHHcCCCC
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLR--TPMLRPGEPNEVSSVVAFLCLSAT 244 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~va~~~~~l~s~~~ 244 (263)
|++++.|+++++.|+.++||+|++++||+++|++........... ..+... .|..+..+|+|+++.+.+++++..
T Consensus 160 Kaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~---~~~~~~~~~p~~~~~~~~~va~~i~~~~~~~~ 236 (296)
T PRK05872 160 KAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAF---RELRARLPWPLRRTTSVEKCAAAFVDGIERRA 236 (296)
T ss_pred HHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhH---HHHHhhCCCcccCCCCHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999876543321111 222222 366788899999999999999888
Q ss_pred CCccCc
Q 024752 245 SYVTGQ 250 (263)
Q Consensus 245 ~~~~G~ 250 (263)
.++++.
T Consensus 237 ~~i~~~ 242 (296)
T PRK05872 237 RRVYAP 242 (296)
T ss_pred CEEEch
Confidence 877765
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-40 Score=272.18 Aligned_cols=232 Identities=28% Similarity=0.410 Sum_probs=195.7
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeC-CchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-NETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
.+++|+++||||++|||++++++|+++|++|+++.| +.+..+++.++. .+.++.+|+++++++.+++++ +
T Consensus 3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~-----~~~~~~~D~~~~~~~~~~~~~----~ 73 (237)
T PRK12742 3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET-----GATAVQTDSADRDAVIDVVRK----S 73 (237)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh-----CCeEEecCCCCHHHHHHHHHH----h
Confidence 367999999999999999999999999999988766 444444443332 245778999999988777653 3
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccc-ccCCCCcchhhHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGV-IAIPMCSIYASSK 167 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~-~~~~~~~~Y~~sK 167 (263)
+++|++|||||.....+..+.+.++|++.+++|+.+++.+++++++.|++ .+++|++||..+. .+.++...|+++|
T Consensus 74 -~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~~sK 150 (237)
T PRK12742 74 -GALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPE--GGRIIIIGSVNGDRMPVAGMAAYAASK 150 (237)
T ss_pred -CCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc--CCeEEEEeccccccCCCCCCcchHHhH
Confidence 68999999999877666777889999999999999999999999999864 5899999998874 4667889999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
++++.++++++.++.++||+||+|+||+++|++..... ... .......|++++.+|+|+++.+.||+++.+.++
T Consensus 151 aa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~---~~~---~~~~~~~~~~~~~~p~~~a~~~~~l~s~~~~~~ 224 (237)
T PRK12742 151 SALQGMARGLARDFGPRGITINVVQPGPIDTDANPANG---PMK---DMMHSFMAIKRHGRPEEVAGMVAWLAGPEASFV 224 (237)
T ss_pred HHHHHHHHHHHHHHhhhCeEEEEEecCcccCCcccccc---HHH---HHHHhcCCCCCCCCHHHHHHHHHHHcCcccCcc
Confidence 99999999999999999999999999999999864321 111 223345678899999999999999999999999
Q ss_pred cCcEEEeCCCcc
Q 024752 248 TGQVICVDGGYS 259 (263)
Q Consensus 248 ~G~~i~~dgG~~ 259 (263)
+|+.+.+|||+.
T Consensus 225 ~G~~~~~dgg~~ 236 (237)
T PRK12742 225 TGAMHTIDGAFG 236 (237)
T ss_pred cCCEEEeCCCcC
Confidence 999999999975
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-40 Score=274.01 Aligned_cols=244 Identities=30% Similarity=0.427 Sum_probs=211.1
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEeeCC-chhHHHHHHHHHhcC--CceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRN-ETELNQRIQEWKSKG--LQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 16 vlVtGas~giG~~~a~~l~~~g~~V~~~~r~-~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
++||||++|||+++++.|+++|++|++++|+ .+.+++..+++.... ..+..+++|+++++++.++++++.+.+ +++
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i 80 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAM-GGL 80 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHc-CCc
Confidence 7999999999999999999999999999998 666777766665432 235568899999999999999999988 789
Q ss_pred cEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHHH
Q 024752 93 NILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQ 172 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~ 172 (263)
|++|||||.....++.+.+.+++++.+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|+++|++++.
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~~ 160 (251)
T PRK07069 81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVAS 160 (251)
T ss_pred cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHHHHH
Confidence 99999999987777888899999999999999999999999999998778999999999999888899999999999999
Q ss_pred HHHHHHHHHccCC--cEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCc
Q 024752 173 LTKNLACEWAKDK--IRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQ 250 (263)
Q Consensus 173 ~~~~~a~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~ 250 (263)
++++++.|+.+++ |+++.|+||+++|++...........+.........|..++.+|+|+++.+++|+++...+++|+
T Consensus 161 ~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~ 240 (251)
T PRK07069 161 LTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASDESRFVTGA 240 (251)
T ss_pred HHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHHHHHHHHHHcCccccCccCC
Confidence 9999999998765 99999999999999876432211111122334446677888999999999999999988999999
Q ss_pred EEEeCCCccc
Q 024752 251 VICVDGGYSV 260 (263)
Q Consensus 251 ~i~~dgG~~~ 260 (263)
.|.+|||.+.
T Consensus 241 ~i~~~~g~~~ 250 (251)
T PRK07069 241 ELVIDGGICA 250 (251)
T ss_pred EEEECCCeec
Confidence 9999999764
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-40 Score=272.30 Aligned_cols=242 Identities=32% Similarity=0.433 Sum_probs=212.3
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
++++|+++||||+++||++++++|+++|+.|++.+|+.+.+++..+++ +.++.++.+|+++.++++++++++.+.+
T Consensus 3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 78 (245)
T PRK12936 3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL---GERVKIFPANLSDRDEVKALGQKAEADL- 78 (245)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHc-
Confidence 567999999999999999999999999999999999988777665443 3467888999999999999999999988
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
+++|++|||||.....++.+.+.++|++.+++|+.+++++++++.+.+.+++.++||++||..+..+.+....|+++|++
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sk~a 158 (245)
T PRK12936 79 EGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAG 158 (245)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchHHHHHH
Confidence 78999999999887777777889999999999999999999999998887778899999999999888889999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccC
Q 024752 170 MNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTG 249 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G 249 (263)
++.+++.++.++.+.|+++++|+||+++|++....... . ........|..++.+|+|+++++.+|+++...+++|
T Consensus 159 ~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~ia~~~~~l~~~~~~~~~G 233 (245)
T PRK12936 159 MIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLNDK--Q---KEAIMGAIPMKRMGTGAEVASAVAYLASSEAAYVTG 233 (245)
T ss_pred HHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccChH--H---HHHHhcCCCCCCCcCHHHHHHHHHHHcCccccCcCC
Confidence 99999999999999999999999999999876543211 1 122233567788889999999999999988889999
Q ss_pred cEEEeCCCccc
Q 024752 250 QVICVDGGYSV 260 (263)
Q Consensus 250 ~~i~~dgG~~~ 260 (263)
+.+++|||..+
T Consensus 234 ~~~~~~~g~~~ 244 (245)
T PRK12936 234 QTIHVNGGMAM 244 (245)
T ss_pred CEEEECCCccc
Confidence 99999999764
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-40 Score=274.69 Aligned_cols=250 Identities=28% Similarity=0.373 Sum_probs=217.5
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
++++|++|||||+++||++++++|+++|++|++++|+++..++..+++.+.+.++.++.+|+++++++.++++++.+.+
T Consensus 4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~- 82 (262)
T PRK13394 4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERF- 82 (262)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence 4779999999999999999999999999999999999998888888887777778889999999999999999998887
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHH-hhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLL-KSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+++|++|||||.....++.+.+.+++++.+++|+.+++.+++++++.| ++.+.++||++||..+..+.+....|+++|+
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~ 162 (262)
T PRK13394 83 GSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKH 162 (262)
T ss_pred CCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCcccHHHHH
Confidence 789999999998877777778899999999999999999999999999 6666789999999988888888889999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccc------hhHHHHH-HhHhcCCCCCCCChhhHHHHHHHHcC
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDS------NFLEHAN-RMVLRTPMLRPGEPNEVSSVVAFLCL 241 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~~~~va~~~~~l~s 241 (263)
+++.++++++.++.+.||++++|+||+++|++........ ...+... .+....+.+.+.+++|+++++.++++
T Consensus 163 a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~ 242 (262)
T PRK13394 163 GLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLSS 242 (262)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHcC
Confidence 9999999999999989999999999999999764332111 0111111 12234566789999999999999998
Q ss_pred CCCCCccCcEEEeCCCccc
Q 024752 242 SATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 242 ~~~~~~~G~~i~~dgG~~~ 260 (263)
....+++|+.+++|+|+.+
T Consensus 243 ~~~~~~~g~~~~~~~g~~~ 261 (262)
T PRK13394 243 FPSAALTGQSFVVSHGWFM 261 (262)
T ss_pred ccccCCcCCEEeeCCceec
Confidence 8778899999999999764
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-40 Score=276.34 Aligned_cols=249 Identities=29% Similarity=0.371 Sum_probs=217.2
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc--CCceEEEeccCCCHHHHHHHHHHHH
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
.+++++|+++|||++++||+++++.|+++|++|++++|+.+..+...+++... +.++.++.+|+++++++.++++++.
T Consensus 2 ~~~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 81 (276)
T PRK05875 2 QLSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAAT 81 (276)
T ss_pred CcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 35688999999999999999999999999999999999988877777766543 3468888999999999999999999
Q ss_pred hhcCCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchh
Q 024752 86 SQFDGKLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYA 164 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~ 164 (263)
+.+ +++|++|||||.... .++.+.+.++|.+.+++|+.+++.+++++++.|.+++.++|+++||..+..+.++..+|+
T Consensus 82 ~~~-~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~ 160 (276)
T PRK05875 82 AWH-GRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYG 160 (276)
T ss_pred HHc-CCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchH
Confidence 988 799999999997643 466678899999999999999999999999999887788999999999988888889999
Q ss_pred hHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCC
Q 024752 165 SSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244 (263)
Q Consensus 165 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~ 244 (263)
++|++++.++++++.++.+.||+++.|+||+++|++........... ..+....|..++++++|+++++.+|+++..
T Consensus 161 ~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~dva~~~~~l~~~~~ 237 (276)
T PRK05875 161 VTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELS---ADYRACTPLPRVGEVEDVANLAMFLLSDAA 237 (276)
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHH---HHHHcCCCCCCCcCHHHHHHHHHHHcCchh
Confidence 99999999999999999999999999999999999875433222211 233345677888899999999999999888
Q ss_pred CCccCcEEEeCCCccc
Q 024752 245 SYVTGQVICVDGGYSV 260 (263)
Q Consensus 245 ~~~~G~~i~~dgG~~~ 260 (263)
.+++|+.+++|||+.+
T Consensus 238 ~~~~g~~~~~~~g~~~ 253 (276)
T PRK05875 238 SWITGQVINVDGGHML 253 (276)
T ss_pred cCcCCCEEEECCCeec
Confidence 8899999999999875
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=273.57 Aligned_cols=233 Identities=27% Similarity=0.386 Sum_probs=199.2
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
|++++|+++|||+++|||++++++|+++|++|++++|+.... ...++.++.+|++++ ++++.+.+
T Consensus 1 ~~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~~~~~~~D~~~~------~~~~~~~~ 65 (235)
T PRK06550 1 QEFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD---------LSGNFHFLQLDLSDD------LEPLFDWV 65 (235)
T ss_pred CCCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc---------cCCcEEEEECChHHH------HHHHHHhh
Confidence 568899999999999999999999999999999999986431 123578889999987 34444455
Q ss_pred CCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 89 DGKLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 89 ~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+++|++|||||.... .++.+.+.++|++.+++|+.++++++++++|.|.+++.++||++||..+..+.++...|+++|
T Consensus 66 -~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK 144 (235)
T PRK06550 66 -PSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASK 144 (235)
T ss_pred -CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHHHH
Confidence 789999999997643 456778899999999999999999999999999887789999999999998888899999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
++++.++++++.|+.++||++++|+||+++|++........... .......|++++.+|+|+++++.||+++.+.++
T Consensus 145 ~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~ 221 (235)
T PRK06550 145 HALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLA---DWVARETPIKRWAEPEEVAELTLFLASGKADYM 221 (235)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHH---HHHhccCCcCCCCCHHHHHHHHHHHcChhhccC
Confidence 99999999999999999999999999999999864322222221 233446788899999999999999999988999
Q ss_pred cCcEEEeCCCccc
Q 024752 248 TGQVICVDGGYSV 260 (263)
Q Consensus 248 ~G~~i~~dgG~~~ 260 (263)
+|+.+.+|||+++
T Consensus 222 ~g~~~~~~gg~~~ 234 (235)
T PRK06550 222 QGTIVPIDGGWTL 234 (235)
T ss_pred CCcEEEECCceec
Confidence 9999999999864
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-40 Score=273.37 Aligned_cols=249 Identities=29% Similarity=0.395 Sum_probs=219.3
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
+++|+++|||++++||++++++|+++|++|++++|+++..++..+++...+.++..+.+|+++++++.++++++.+.+ +
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~ 80 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETF-G 80 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence 678999999999999999999999999999999999999888888887767788999999999999999999999987 7
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHH
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAM 170 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~ 170 (263)
++|++|||||.....++.+.+.+++++.+++|+.+++.+++.+++.|++++.++||++||..+..+.++...|+++|+++
T Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~k~a~ 160 (258)
T PRK12429 81 GVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGL 160 (258)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHHHHHH
Confidence 89999999998877777888999999999999999999999999999988889999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEEecCcccCCccccccccc------hhHHH-HHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 171 NQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDS------NFLEH-ANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 171 ~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~------~~~~~-~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
+.+++.++.|+.+.||+++.++||+++|++........ ..... ...+....+.+++.+++|+++++.+++.+.
T Consensus 161 ~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~ 240 (258)
T PRK12429 161 IGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLASFA 240 (258)
T ss_pred HHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHHHHHHHHHHcCcc
Confidence 99999999999999999999999999999865422110 01111 112233446678899999999999999887
Q ss_pred CCCccCcEEEeCCCccc
Q 024752 244 TSYVTGQVICVDGGYSV 260 (263)
Q Consensus 244 ~~~~~G~~i~~dgG~~~ 260 (263)
...++|+.+++|||++.
T Consensus 241 ~~~~~g~~~~~~~g~~~ 257 (258)
T PRK12429 241 AKGVTGQAWVVDGGWTA 257 (258)
T ss_pred ccCccCCeEEeCCCEec
Confidence 78899999999999874
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-40 Score=271.78 Aligned_cols=242 Identities=30% Similarity=0.422 Sum_probs=211.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchh-HHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-LNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
|+++|||++++||++++++|+++|++|++++|+... ..+...+....+.++.++.+|+++++++.++++++.+.+ +++
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-~~i 81 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEE-GPV 81 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CCC
Confidence 689999999999999999999999999999998642 223333333345568899999999999999999999988 789
Q ss_pred cEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHHH
Q 024752 93 NILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQ 172 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~ 172 (263)
|++|||+|.....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.++...|+++|+++++
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~~ 161 (245)
T PRK12824 82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIG 161 (245)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHHHHHHHH
Confidence 99999999987777788899999999999999999999999999998878999999999998888899999999999999
Q ss_pred HHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCcEE
Q 024752 173 LTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVI 252 (263)
Q Consensus 173 ~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i 252 (263)
++++++.++.+.||+++.++||+++|++...... . ....+....|.+...+++|+++.+.+|+++...+++|+.+
T Consensus 162 ~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~ 236 (245)
T PRK12824 162 FTKALASEGARYGITVNCIAPGYIATPMVEQMGP--E---VLQSIVNQIPMKRLGTPEEIAAAVAFLVSEAAGFITGETI 236 (245)
T ss_pred HHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCH--H---HHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEE
Confidence 9999999999999999999999999998654321 1 1233445667888889999999999999988889999999
Q ss_pred EeCCCcccc
Q 024752 253 CVDGGYSVT 261 (263)
Q Consensus 253 ~~dgG~~~~ 261 (263)
.+|||..++
T Consensus 237 ~~~~g~~~~ 245 (245)
T PRK12824 237 SINGGLYMH 245 (245)
T ss_pred EECCCeecC
Confidence 999998775
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-40 Score=270.75 Aligned_cols=222 Identities=18% Similarity=0.235 Sum_probs=193.0
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
|++++|+++||||++|||++++++|+++|++|++++|+++.++++.+++...+.++..+.+|++++++++++++++.+++
T Consensus 1 ~~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (227)
T PRK08862 1 MDIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQF 80 (227)
T ss_pred CCCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHh
Confidence 57899999999999999999999999999999999999999999888887767778889999999999999999999998
Q ss_pred CC-CccEEEeCCCCCC-CCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccccccCCCCcchhh
Q 024752 89 DG-KLNILINNAGTFI-PKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVIAIPMCSIYAS 165 (263)
Q Consensus 89 ~~-~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~ 165 (263)
+ ++|++|||||... ..++.+.+.++|.+.+++|+.+++.+++.++|+|.+++ +|+||++||..+. ++...|++
T Consensus 81 -g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~---~~~~~Y~a 156 (227)
T PRK08862 81 -NRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH---QDLTGVES 156 (227)
T ss_pred -CCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC---CCcchhHH
Confidence 6 8999999998654 35678889999999999999999999999999998754 6899999997643 56778999
Q ss_pred HHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCC
Q 024752 166 SKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245 (263)
Q Consensus 166 sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~ 245 (263)
+|+++.+|+++++.|++++||+||+|+||+++|+... ....+ ... .+|++.+..||++ ++
T Consensus 157 sKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~---~~~~~----~~~-----------~~~~~~~~~~l~~--~~ 216 (227)
T PRK08862 157 SNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGEL---DAVHW----AEI-----------QDELIRNTEYIVA--NE 216 (227)
T ss_pred HHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCcc---CHHHH----HHH-----------HHHHHhheeEEEe--cc
Confidence 9999999999999999999999999999999998311 00111 111 1799999999997 67
Q ss_pred CccCcEEEe
Q 024752 246 YVTGQVICV 254 (263)
Q Consensus 246 ~~~G~~i~~ 254 (263)
++||+.|.-
T Consensus 217 ~~tg~~~~~ 225 (227)
T PRK08862 217 YFSGRVVEA 225 (227)
T ss_pred cccceEEee
Confidence 999998753
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=270.15 Aligned_cols=242 Identities=31% Similarity=0.492 Sum_probs=210.6
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEee-CCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCS-RNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
+++|+++||||+++||++++++|+++|++|++.. |+++..++..+++.+.+.++.++++|+++++++.++++++.+.+
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 82 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHF- 82 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence 6789999999999999999999999999988755 45566666767776666779999999999999999999999998
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
+++|++|||||......+.+.+.+++++.+++|+.+++.++++++|.|.+.+.+++|++||..+..+.++...|+++|++
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a 162 (247)
T PRK12935 83 GKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAG 162 (247)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchHHHHHH
Confidence 89999999999987777778899999999999999999999999999988777899999999988888889999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccC
Q 024752 170 MNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTG 249 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G 249 (263)
++.++++++.|+.+.||+++.++||+++|++...... . .........+..++..|+|+++++++++.+. .+++|
T Consensus 163 ~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~--~---~~~~~~~~~~~~~~~~~edva~~~~~~~~~~-~~~~g 236 (247)
T PRK12935 163 MLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPE--E---VRQKIVAKIPKKRFGQADEIAKGVVYLCRDG-AYITG 236 (247)
T ss_pred HHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccH--H---HHHHHHHhCCCCCCcCHHHHHHHHHHHcCcc-cCccC
Confidence 9999999999999999999999999999987654321 1 1122333456677889999999999999754 57999
Q ss_pred cEEEeCCCcc
Q 024752 250 QVICVDGGYS 259 (263)
Q Consensus 250 ~~i~~dgG~~ 259 (263)
+.+++|||..
T Consensus 237 ~~~~i~~g~~ 246 (247)
T PRK12935 237 QQLNINGGLY 246 (247)
T ss_pred CEEEeCCCcc
Confidence 9999999964
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-40 Score=272.53 Aligned_cols=239 Identities=28% Similarity=0.373 Sum_probs=203.7
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc--CCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
+++|+++||||++|||+++|+.|+++|++|++++|+++..++..+++... +..+.++.+|+++++++.++++++.+.+
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 81 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY 81 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 57899999999999999999999999999999999999888888877542 2346677999999999999999999888
Q ss_pred CCCccEEEeCCCCCC---CCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCC-------
Q 024752 89 DGKLNILINNAGTFI---PKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIP------- 158 (263)
Q Consensus 89 ~~~id~li~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~------- 158 (263)
+++|++||||+... ..++.+.+.+++++.+++|+.+++.++++++|.|++++.++||++||..+..+..
T Consensus 82 -~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~ 160 (256)
T PRK09186 82 -GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGT 160 (256)
T ss_pred -CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhcccc
Confidence 78999999998643 2456778999999999999999999999999999988788999999987654311
Q ss_pred ---CCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHH
Q 024752 159 ---MCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSV 235 (263)
Q Consensus 159 ---~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~ 235 (263)
....|+++|+++++++++++.|+.++||+++.|+||++.++.... . ...+....+..++.+|+|++++
T Consensus 161 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~------~---~~~~~~~~~~~~~~~~~dva~~ 231 (256)
T PRK09186 161 SMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEA------F---LNAYKKCCNGKGMLDPDDICGT 231 (256)
T ss_pred ccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHH------H---HHHHHhcCCccCCCCHHHhhhh
Confidence 123699999999999999999999999999999999998764211 1 1222334466778899999999
Q ss_pred HHHHcCCCCCCccCcEEEeCCCcc
Q 024752 236 VAFLCLSATSYVTGQVICVDGGYS 259 (263)
Q Consensus 236 ~~~l~s~~~~~~~G~~i~~dgG~~ 259 (263)
+++++++.+.+++|+.|.+|||++
T Consensus 232 ~~~l~~~~~~~~~g~~~~~~~g~~ 255 (256)
T PRK09186 232 LVFLLSDQSKYITGQNIIVDDGFS 255 (256)
T ss_pred HhheeccccccccCceEEecCCcc
Confidence 999999988999999999999975
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-40 Score=299.65 Aligned_cols=246 Identities=33% Similarity=0.536 Sum_probs=214.1
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
..++|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++ +.++.++.+|++++++++++++++.+.+
T Consensus 2 ~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 77 (520)
T PRK06484 2 KAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL---GPDHHALAMDVSDEAQIREGFEQLHREF- 77 (520)
T ss_pred CCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEeccCCHHHHHHHHHHHHHHh-
Confidence 357999999999999999999999999999999999988877766554 4567889999999999999999999998
Q ss_pred CCccEEEeCCCCCC--CCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCc-eEEEEccccccccCCCCcchhhH
Q 024752 90 GKLNILINNAGTFI--PKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNG-NIIFISSVAGVIAIPMCSIYASS 166 (263)
Q Consensus 90 ~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-~iv~vsS~~~~~~~~~~~~Y~~s 166 (263)
+++|+||||||+.. ..++.+.+.++|++.+++|+.+++.++++++|+|++++.| +||++||..+..+.++...|+++
T Consensus 78 g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~as 157 (520)
T PRK06484 78 GRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSAS 157 (520)
T ss_pred CCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHH
Confidence 79999999999843 2456788999999999999999999999999999876555 99999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
|+++++|+++++.|+.++||+|++|+||+++|++........... ........|..+..+|+++++.+.||+++...+
T Consensus 158 Kaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~va~~v~~l~~~~~~~ 235 (520)
T PRK06484 158 KAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLD--PSAVRSRIPLGRLGRPEEIAEAVFFLASDQASY 235 (520)
T ss_pred HHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhh--hHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence 999999999999999999999999999999999876543221111 122233567778889999999999999999999
Q ss_pred ccCcEEEeCCCcccc
Q 024752 247 VTGQVICVDGGYSVT 261 (263)
Q Consensus 247 ~~G~~i~~dgG~~~~ 261 (263)
++|+.+.+|||+...
T Consensus 236 ~~G~~~~~~gg~~~~ 250 (520)
T PRK06484 236 ITGSTLVVDGGWTVY 250 (520)
T ss_pred ccCceEEecCCeecc
Confidence 999999999998643
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-40 Score=274.74 Aligned_cols=238 Identities=24% Similarity=0.266 Sum_probs=199.8
Q ss_pred EEEEecCCCchHHHHHHHHHH----CCCeEEEeeCCchhHHHHHHHHHh--cCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 15 TALVTGGTKGIGYAVVEELAA----FGAIVHTCSRNETELNQRIQEWKS--KGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~----~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
+++||||++|||++++++|++ .|++|++++|+++.++++.+++.. .+.++.++.+|++++++++++++++.+.+
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP 81 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence 689999999999999999997 799999999999999888888875 24568889999999999999999998876
Q ss_pred CCC----ccEEEeCCCCCCCC--CCCC-CCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC--CceEEEEccccccccCCC
Q 024752 89 DGK----LNILINNAGTFIPK--ETTE-FTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG--NGNIIFISSVAGVIAIPM 159 (263)
Q Consensus 89 ~~~----id~li~~ag~~~~~--~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~vsS~~~~~~~~~ 159 (263)
++ .|++|||||..... ...+ .+.++|++.|++|+.+++.+++.++|.|++++ .++||++||..+..+.++
T Consensus 82 -g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~ 160 (256)
T TIGR01500 82 -RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKG 160 (256)
T ss_pred -ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCC
Confidence 43 36999999975432 2233 35789999999999999999999999998753 479999999999988889
Q ss_pred CcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHH
Q 024752 160 CSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFL 239 (263)
Q Consensus 160 ~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l 239 (263)
...|++||++++.|+++++.|++++||+||+|+||+++|++.....+.....+....+....|.+++.+|+|+++.+++|
T Consensus 161 ~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l 240 (256)
T TIGR01500 161 WALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAKGKLVDPKVSAQKLLSL 240 (256)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998764322110111113344556888999999999999999
Q ss_pred cCCCCCCccCcEEEe
Q 024752 240 CLSATSYVTGQVICV 254 (263)
Q Consensus 240 ~s~~~~~~~G~~i~~ 254 (263)
++ ..+++||+++.+
T Consensus 241 ~~-~~~~~~G~~~~~ 254 (256)
T TIGR01500 241 LE-KDKFKSGAHVDY 254 (256)
T ss_pred Hh-cCCcCCcceeec
Confidence 96 567899998864
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-40 Score=281.50 Aligned_cols=225 Identities=26% Similarity=0.320 Sum_probs=199.5
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
+++++|+++||||++|||++++++|+++|++|++++|+++.+++..+++.+.+.++.++.+|++|+++++++++++.+.+
T Consensus 3 ~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 82 (330)
T PRK06139 3 GPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFG 82 (330)
T ss_pred cCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhc
Confidence 45789999999999999999999999999999999999999999998888777788899999999999999999999887
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+++|++|||||+...+++.+.+.++|++.+++|+.++++++++++|+|++++.|+||+++|..+..+.|....|++||+
T Consensus 83 -g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~asKa 161 (330)
T PRK06139 83 -GRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKF 161 (330)
T ss_pred -CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHHHHH
Confidence 8899999999998888888999999999999999999999999999999888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccC-CcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCC
Q 024752 169 AMNQLTKNLACEWAKD-KIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS 242 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~-gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~ 242 (263)
++.+|+++++.|+.+. ||+|++|+||+++|++......... . ...+.....+|+++|+.+++++..
T Consensus 162 al~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~~~-----~---~~~~~~~~~~pe~vA~~il~~~~~ 228 (330)
T PRK06139 162 GLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYTG-----R---RLTPPPPVYDPRRVAKAVVRLADR 228 (330)
T ss_pred HHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccccc-----c---cccCCCCCCCHHHHHHHHHHHHhC
Confidence 9999999999999874 9999999999999998753221100 0 011233456899999999888753
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-39 Score=267.14 Aligned_cols=241 Identities=31% Similarity=0.429 Sum_probs=213.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeC-CchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-NETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
|+++|||++++||++++++|+++|++|+++.| +++..++..+++...+.++.++.+|+++++++.++++++.+.+ +++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i 79 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAEL-GPI 79 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence 78999999999999999999999999999888 6666666666665556678899999999999999999999987 789
Q ss_pred cEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHHH
Q 024752 93 NILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQ 172 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~ 172 (263)
|++|||||.....++.+.+.+++++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|+++|++++.
T Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~ 159 (242)
T TIGR01829 80 DVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIG 159 (242)
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHHHHHH
Confidence 99999999887777778899999999999999999999999999998878899999999988888889999999999999
Q ss_pred HHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCcEE
Q 024752 173 LTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVI 252 (263)
Q Consensus 173 ~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i 252 (263)
++++++.++.+.||+++.++||+++|++...... . ....+....|..+..+|+++++.+.||+++...+++|+.|
T Consensus 160 ~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~ 234 (242)
T TIGR01829 160 FTKALAQEGATKGVTVNTISPGYIATDMVMAMRE--D---VLNSIVAQIPVGRLGRPEEIAAAVAFLASEEAGYITGATL 234 (242)
T ss_pred HHHHHHHHhhhhCeEEEEEeeCCCcCccccccch--H---HHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEE
Confidence 9999999999999999999999999998654321 1 1233444568888899999999999999988889999999
Q ss_pred EeCCCccc
Q 024752 253 CVDGGYSV 260 (263)
Q Consensus 253 ~~dgG~~~ 260 (263)
.+|||+.+
T Consensus 235 ~~~gg~~~ 242 (242)
T TIGR01829 235 SINGGLYM 242 (242)
T ss_pred EecCCccC
Confidence 99999753
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=272.83 Aligned_cols=241 Identities=25% Similarity=0.305 Sum_probs=196.4
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeC-CchhHHHHHHHHHh-cCCceEEEeccCCCHHHH----HHHHHHHHh
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-NETELNQRIQEWKS-KGLQVSGSVCDLKIRAQR----EKLMETVSS 86 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~----~~~~~~~~~ 86 (263)
.++++||||++|||++++++|+++|++|++++| +.+.++++.+++.. .+.++.++.+|++|++++ +++++.+.+
T Consensus 1 ~~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~ 80 (267)
T TIGR02685 1 APAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFR 80 (267)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHH
Confidence 378999999999999999999999999998765 56677777777754 245677889999999866 555666666
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCH-----------HHHHHHHHhhhHhHHHHHHHHhHHHhhC------CCceEEEEc
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTE-----------EDFSTVMTTNFESAYHLSQLAHPLLKSA------GNGNIIFIS 149 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~~~iv~vs 149 (263)
.+ +++|+||||||...+.++.+.+. ++|.+++++|+.+++.++++++|.|++. ..++|++++
T Consensus 81 ~~-g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~ 159 (267)
T TIGR02685 81 AF-GRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLC 159 (267)
T ss_pred cc-CCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEeh
Confidence 66 78999999999876555443333 3589999999999999999999999643 246899999
Q ss_pred cccccccCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCC-CCCC
Q 024752 150 SVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPML-RPGE 228 (263)
Q Consensus 150 S~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 228 (263)
|..+..+.++..+|++||+++++++++++.|+.++||+|++|+||++.|+.... .... ..+....|+. +..+
T Consensus 160 s~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~----~~~~---~~~~~~~~~~~~~~~ 232 (267)
T TIGR02685 160 DAMTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMP----FEVQ---EDYRRKVPLGQREAS 232 (267)
T ss_pred hhhccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccc----hhHH---HHHHHhCCCCcCCCC
Confidence 999888888899999999999999999999999999999999999998763211 1111 2222345654 6789
Q ss_pred hhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 229 PNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 229 ~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
|+|+++.++||+++.+.+++|+.+.+|||++++
T Consensus 233 ~~~va~~~~~l~~~~~~~~~G~~~~v~gg~~~~ 265 (267)
T TIGR02685 233 AEQIADVVIFLVSPKAKYITGTCIKVDGGLSLT 265 (267)
T ss_pred HHHHHHHHHHHhCcccCCcccceEEECCceecc
Confidence 999999999999999999999999999998764
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-39 Score=270.06 Aligned_cols=248 Identities=28% Similarity=0.379 Sum_probs=215.4
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAI-VHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
+++|+++|||++++||++++++|+++|++ |++++|+.+..++..+++...+.++.++.+|+++++++.++++.+.+.+
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 82 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF- 82 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh-
Confidence 67899999999999999999999999998 9999999888877777776666778889999999999999999999988
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccccccCCCCcchhhHHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+++|++|||+|.....++.+.+.++|++.+++|+.+++.+++++++.|.+++ .+++|++||..+..+.++...|+++|+
T Consensus 83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~ 162 (260)
T PRK06198 83 GRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKG 162 (260)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHHHHH
Confidence 7899999999988777777889999999999999999999999999997754 589999999998888888899999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccccc--chhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKD--SNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
++++++++++.|+.+.||+++.++||+++|++....... .....+........|.+++.+++|+++.+.+++++...+
T Consensus 163 a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~ 242 (260)
T PRK06198 163 ALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAFLLSDESGL 242 (260)
T ss_pred HHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHHHHHHHHHHHcChhhCC
Confidence 999999999999999999999999999999975322111 011111223334567788899999999999999988889
Q ss_pred ccCcEEEeCCCcc
Q 024752 247 VTGQVICVDGGYS 259 (263)
Q Consensus 247 ~~G~~i~~dgG~~ 259 (263)
++|+.|.+|+|..
T Consensus 243 ~~G~~~~~~~~~~ 255 (260)
T PRK06198 243 MTGSVIDFDQSVW 255 (260)
T ss_pred ccCceEeECCccc
Confidence 9999999999864
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=270.44 Aligned_cols=241 Identities=30% Similarity=0.425 Sum_probs=206.7
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
++||+++||||++|||.+++++|+++|++|++++|+....++..+++. ..++.+|++++++++++++++.+.+ +
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-----~~~~~~D~~~~~~~~~~~~~~~~~~-~ 78 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG-----GLFVPTDVTDEDAVNALFDTAAETY-G 78 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-----CcEEEeeCCCHHHHHHHHHHHHHHc-C
Confidence 679999999999999999999999999999999999877666555432 2577899999999999999998887 7
Q ss_pred CccEEEeCCCCCCC--CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCC-CCcchhhHH
Q 024752 91 KLNILINNAGTFIP--KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIP-MCSIYASSK 167 (263)
Q Consensus 91 ~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-~~~~Y~~sK 167 (263)
++|++|||||...+ .++.+.+.+.|++.+++|+.+++++++.++|.|++++.++||++||..+..+.+ +...|+++|
T Consensus 79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~~~Y~~sK 158 (255)
T PRK06057 79 SVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASK 158 (255)
T ss_pred CCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCCcchHHHH
Confidence 89999999998643 345677889999999999999999999999999887778999999987776653 677899999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
++++.+++.++.++.++||++++|+||+++|++........ .+...+.....|.+++.+|+|+++++.+|+++...++
T Consensus 159 aal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~ 236 (255)
T PRK06057 159 GGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKD--PERAARRLVHVPMGRFAEPEEIAAAVAFLASDDASFI 236 (255)
T ss_pred HHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCC--HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCc
Confidence 99999999999999999999999999999999865433211 1111223335678889999999999999999999999
Q ss_pred cCcEEEeCCCcc
Q 024752 248 TGQVICVDGGYS 259 (263)
Q Consensus 248 ~G~~i~~dgG~~ 259 (263)
+|+.+.+|||..
T Consensus 237 ~g~~~~~~~g~~ 248 (255)
T PRK06057 237 TASTFLVDGGIS 248 (255)
T ss_pred cCcEEEECCCee
Confidence 999999999965
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-39 Score=267.46 Aligned_cols=244 Identities=28% Similarity=0.378 Sum_probs=211.0
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
++++|+++||||+++||++++++|+++|++|++++|+++..+++.+++...+..+..+.+|+++++++.++++++.+.+
T Consensus 3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~- 81 (250)
T PRK07774 3 RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAF- 81 (250)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh-
Confidence 4789999999999999999999999999999999999888777777776555567889999999999999999999988
Q ss_pred CCccEEEeCCCCCC---CCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhH
Q 024752 90 GKLNILINNAGTFI---PKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASS 166 (263)
Q Consensus 90 ~~id~li~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s 166 (263)
+++|+||||||+.. ..++.+.+.+++++.+++|+.++++++++++|.|.+.+.++||++||..+.. +...|++|
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---~~~~Y~~s 158 (250)
T PRK07774 82 GGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL---YSNFYGLA 158 (250)
T ss_pred CCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC---CccccHHH
Confidence 78999999999864 2455677899999999999999999999999999887789999999987653 45789999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
|++++.++++++.++.+.||+++.++||.++|++........ .........|.....+++|+++++++++++....
T Consensus 159 K~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~ 234 (250)
T PRK07774 159 KVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKE----FVADMVKGIPLSRMGTPEDLVGMCLFLLSDEASW 234 (250)
T ss_pred HHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHH----HHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhhC
Confidence 999999999999999999999999999999999876433221 1233444567777889999999999999877667
Q ss_pred ccCcEEEeCCCcccc
Q 024752 247 VTGQVICVDGGYSVT 261 (263)
Q Consensus 247 ~~G~~i~~dgG~~~~ 261 (263)
.+|+.+++|+|.+++
T Consensus 235 ~~g~~~~v~~g~~~~ 249 (250)
T PRK07774 235 ITGQIFNVDGGQIIR 249 (250)
T ss_pred cCCCEEEECCCeecc
Confidence 899999999998764
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-39 Score=266.88 Aligned_cols=240 Identities=31% Similarity=0.422 Sum_probs=205.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEe-eCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTC-SRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
|+++||||++|||+++++.|+++|++|+++ .|+++..++...++...+.++.++.+|+++++++.++++++.+.+ +++
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i 81 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAF-GRL 81 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhc-CCC
Confidence 789999999999999999999999998775 467777777777777666778999999999999999999998887 789
Q ss_pred cEEEeCCCCCCC-CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC---CceEEEEccccccccCCC-CcchhhHH
Q 024752 93 NILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG---NGNIIFISSVAGVIAIPM-CSIYASSK 167 (263)
Q Consensus 93 d~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~iv~vsS~~~~~~~~~-~~~Y~~sK 167 (263)
|++|||||.... .++.+.+.+++++.+++|+.+++.+++.+++.|..++ .++||++||..+..+.+. ...|+++|
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~sK 161 (248)
T PRK06947 82 DALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSK 161 (248)
T ss_pred CEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHhhH
Confidence 999999998754 4567788999999999999999999999999987653 578999999988877664 56899999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
++++.++++++.++.+.||+|+.|+||+++|++..... ... .........|..+..+++|+++.+++++++..+++
T Consensus 162 ~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~-~~~---~~~~~~~~~~~~~~~~~e~va~~~~~l~~~~~~~~ 237 (248)
T PRK06947 162 GAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGG-QPG---RAARLGAQTPLGRAGEADEVAETIVWLLSDAASYV 237 (248)
T ss_pred HHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccC-CHH---HHHHHhhcCCCCCCcCHHHHHHHHHHHcCccccCc
Confidence 99999999999999999999999999999999854311 111 11223345677788899999999999999988999
Q ss_pred cCcEEEeCCCc
Q 024752 248 TGQVICVDGGY 258 (263)
Q Consensus 248 ~G~~i~~dgG~ 258 (263)
+|+.|.+|||.
T Consensus 238 ~G~~~~~~gg~ 248 (248)
T PRK06947 238 TGALLDVGGGR 248 (248)
T ss_pred CCceEeeCCCC
Confidence 99999999984
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=265.72 Aligned_cols=214 Identities=25% Similarity=0.279 Sum_probs=181.6
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCccE
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNI 94 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 94 (263)
+++||||++|||+++++.|+++|++|++++|+.+++++..+++ .+.++++|++++++++++++++. +++|+
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~----~~id~ 72 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-----DVDAIVCDNTDPASLEEARGLFP----HHLDT 72 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCcEEecCCCCHHHHHHHHHHHh----hcCcE
Confidence 5899999999999999999999999999999988777666553 25678899999999999987763 36899
Q ss_pred EEeCCCCCCC------CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 95 LINNAGTFIP------KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 95 li~~ag~~~~------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+|||||.... .++.+ +.++|++.+++|+.++++++++++|.|++ +|+||++||.. .+....|+++|+
T Consensus 73 lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~Iv~isS~~----~~~~~~Y~asKa 145 (223)
T PRK05884 73 IVNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS--GGSIISVVPEN----PPAGSAEAAIKA 145 (223)
T ss_pred EEECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCeEEEEecCC----CCCccccHHHHH
Confidence 9999985321 12333 47899999999999999999999999965 58999999976 345678999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCcc
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~ 248 (263)
|+++|+++++.|++++||+||+|+||+++|++..... ..|. ..|+|+++.+.||+++.+.+++
T Consensus 146 al~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~~--------------~~p~---~~~~~ia~~~~~l~s~~~~~v~ 208 (223)
T PRK05884 146 ALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDGLS--------------RTPP---PVAAEIARLALFLTTPAARHIT 208 (223)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhhcc--------------CCCC---CCHHHHHHHHHHHcCchhhccC
Confidence 9999999999999999999999999999998642210 1232 3799999999999999999999
Q ss_pred CcEEEeCCCcccc
Q 024752 249 GQVICVDGGYSVT 261 (263)
Q Consensus 249 G~~i~~dgG~~~~ 261 (263)
|+.+.+|||+..+
T Consensus 209 G~~i~vdgg~~~~ 221 (223)
T PRK05884 209 GQTLHVSHGALAH 221 (223)
T ss_pred CcEEEeCCCeecc
Confidence 9999999999765
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=265.28 Aligned_cols=244 Identities=33% Similarity=0.445 Sum_probs=210.8
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEE-eeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHT-CSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
+++|+++||||+++||+++++.|+++|++|++ ..|+.++.++..+++...+.++.++.+|++|++++.++++++.+.++
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~ 83 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ 83 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence 67899999999999999999999999999877 47888877777777765566788899999999999999999988752
Q ss_pred -----CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchh
Q 024752 90 -----GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYA 164 (263)
Q Consensus 90 -----~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~ 164 (263)
+++|++|||||.....++.+.+.+.|++.+++|+.+++++++.+++.|.+ .+++|++||..+..+.++...|+
T Consensus 84 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~v~~sS~~~~~~~~~~~~Y~ 161 (254)
T PRK12746 84 IRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA--EGRVINISSAEVRLGFTGSIAYG 161 (254)
T ss_pred cccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECCHHhcCCCCCCcchH
Confidence 36999999999887777788899999999999999999999999999865 47999999999888888999999
Q ss_pred hHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCC
Q 024752 165 SSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244 (263)
Q Consensus 165 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~ 244 (263)
++|++++.++++++.++.++|++++.++||+++|++........... .......+.++..+++|+++.+.+++++.+
T Consensus 162 ~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~dva~~~~~l~~~~~ 238 (254)
T PRK12746 162 LSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIR---NFATNSSVFGRIGQVEDIADAVAFLASSDS 238 (254)
T ss_pred hhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHH---HHHHhcCCcCCCCCHHHHHHHHHHHcCccc
Confidence 99999999999999999999999999999999999876543322222 222234566778899999999999999877
Q ss_pred CCccCcEEEeCCCcc
Q 024752 245 SYVTGQVICVDGGYS 259 (263)
Q Consensus 245 ~~~~G~~i~~dgG~~ 259 (263)
.+++|+.++++||.+
T Consensus 239 ~~~~g~~~~i~~~~~ 253 (254)
T PRK12746 239 RWVTGQIIDVSGGFC 253 (254)
T ss_pred CCcCCCEEEeCCCcc
Confidence 889999999999965
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=263.91 Aligned_cols=245 Identities=36% Similarity=0.525 Sum_probs=216.9
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEe-eCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTC-SRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
|++++|+++||||+++||+++++.|+++|++|+++ +|+++..++..+++...+.++.++.+|+++++++.++++++.+.
T Consensus 1 ~~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (247)
T PRK05565 1 MKLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEK 80 (247)
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 56889999999999999999999999999999998 99988888777777666667889999999999999999999888
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+ +++|++|||+|.....++.+.+.+++++.+++|+.+++.++++++|.+.+++.+++|++||..+..+.+....|+.+|
T Consensus 81 ~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK 159 (247)
T PRK05565 81 F-GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASK 159 (247)
T ss_pred h-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHHHHH
Confidence 7 789999999998866677788999999999999999999999999999888789999999999988888889999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
++++.++++++.++.+.|+++++++||+++|++.+...... ...+....+..+..+++++++.+.+++++....+
T Consensus 160 ~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~ 234 (247)
T PRK05565 160 GAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEED-----KEGLAEEIPLGRLGKPEEIAKVVLFLASDDASYI 234 (247)
T ss_pred HHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChHH-----HHHHHhcCCCCCCCCHHHHHHHHHHHcCCccCCc
Confidence 99999999999999999999999999999998876543221 1122223456677899999999999999999999
Q ss_pred cCcEEEeCCCcc
Q 024752 248 TGQVICVDGGYS 259 (263)
Q Consensus 248 ~G~~i~~dgG~~ 259 (263)
+|+.+++|+|+.
T Consensus 235 ~g~~~~~~~~~~ 246 (247)
T PRK05565 235 TGQIITVDGGWT 246 (247)
T ss_pred cCcEEEecCCcc
Confidence 999999999974
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-38 Score=263.52 Aligned_cols=243 Identities=31% Similarity=0.448 Sum_probs=209.0
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
|++++++++|||++++||+++++.|+++|++|++++|+..+.++..+++...+.++.++.+|++++++++++++.+.+.+
T Consensus 1 ~~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (253)
T PRK08217 1 MDLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDF 80 (253)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45789999999999999999999999999999999999988888888877667788899999999999999999998887
Q ss_pred CCCccEEEeCCCCCCCCC--------C-CCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-CCceEEEEccccccccCC
Q 024752 89 DGKLNILINNAGTFIPKE--------T-TEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-GNGNIIFISSVAGVIAIP 158 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~--------~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~~~~~~ 158 (263)
+++|++|||||...... + .+.+.+++++.+++|+.+++.+.+.++|.|.++ ..++|+++||.. ..+.+
T Consensus 81 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~-~~~~~ 158 (253)
T PRK08217 81 -GQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA-RAGNM 158 (253)
T ss_pred -CCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc-ccCCC
Confidence 78999999999764322 1 567889999999999999999999999999765 457899998864 45667
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHH
Q 024752 159 MCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAF 238 (263)
Q Consensus 159 ~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ 238 (263)
+...|+++|++++.++++++.++.++||++++++||+++|++..... + .....+....|.++..+++|+++++.+
T Consensus 159 ~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~a~~~~~ 233 (253)
T PRK08217 159 GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMK--P---EALERLEKMIPVGRLGEPEEIAHTVRF 233 (253)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC--H---HHHHHHHhcCCcCCCcCHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999875432 1 112334455677888999999999999
Q ss_pred HcCCCCCCccCcEEEeCCCccc
Q 024752 239 LCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 239 l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
|++ ..+++|+.|++|||+.+
T Consensus 234 l~~--~~~~~g~~~~~~gg~~~ 253 (253)
T PRK08217 234 IIE--NDYVTGRVLEIDGGLRL 253 (253)
T ss_pred HHc--CCCcCCcEEEeCCCccC
Confidence 995 35789999999999864
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=263.66 Aligned_cols=241 Identities=29% Similarity=0.382 Sum_probs=205.2
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEee-CCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCS-RNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
+|+++|||++++||++++++|+++|++|++.. |+++..++..+++...+.++.++.+|+++++++.++++++.+.+ ++
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~ 80 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDREL-GR 80 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHh-CC
Confidence 57999999999999999999999999988876 45555666666666656678889999999999999999999988 89
Q ss_pred ccEEEeCCCCCCC-CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC---CceEEEEccccccccCCC-CcchhhH
Q 024752 92 LNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG---NGNIIFISSVAGVIAIPM-CSIYASS 166 (263)
Q Consensus 92 id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~iv~vsS~~~~~~~~~-~~~Y~~s 166 (263)
+|++|||||.... .++.+.+.++|++.+++|+.+++.+++++++.|.++. .|+||++||..+..+.++ ...|+++
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~~s 160 (248)
T PRK06123 81 LDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAAS 160 (248)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchHHH
Confidence 9999999998754 4566788999999999999999999999999997642 478999999988887776 3679999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
|++++.++++++.|+.+.||+++.|+||++.|++..... .+ ..........|+.+..+|+|+++++.+++++...+
T Consensus 161 Kaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~-~~---~~~~~~~~~~p~~~~~~~~d~a~~~~~l~~~~~~~ 236 (248)
T PRK06123 161 KGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGG-EP---GRVDRVKAGIPMGRGGTAEEVARAILWLLSDEASY 236 (248)
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccC-CH---HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence 999999999999999999999999999999999754321 11 11123444568888889999999999999988889
Q ss_pred ccCcEEEeCCCc
Q 024752 247 VTGQVICVDGGY 258 (263)
Q Consensus 247 ~~G~~i~~dgG~ 258 (263)
++|+.+++|||.
T Consensus 237 ~~g~~~~~~gg~ 248 (248)
T PRK06123 237 TTGTFIDVSGGR 248 (248)
T ss_pred ccCCEEeecCCC
Confidence 999999999984
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-39 Score=266.09 Aligned_cols=225 Identities=17% Similarity=0.232 Sum_probs=195.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCC-ceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL-QVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
|+++||||++|||+++|++|+ +|++|++++|+.++++++.+++.+.+. .+.++++|++|+++++++++++.+.+ +++
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~i 78 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELA-GEI 78 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhc-CCC
Confidence 579999999999999999999 599999999999999999888876554 47889999999999999999999988 899
Q ss_pred cEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccccccCCCCcchhhHHHHHH
Q 024752 93 NILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVIAIPMCSIYASSKVAMN 171 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~ 171 (263)
|++|||||+....+..+.+.+.+.+.+++|+.+++++++.++|.|.+++ +|+||++||..+..+.++...|+++|+|++
T Consensus 79 d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~ 158 (246)
T PRK05599 79 SLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGLD 158 (246)
T ss_pred CEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHHH
Confidence 9999999987655555677788899999999999999999999998764 689999999999998889999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCcE
Q 024752 172 QLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQV 251 (263)
Q Consensus 172 ~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~ 251 (263)
+|+++++.|++++||+||+|+||+++|++...... .....+|+|+|+.++++++.... ++.
T Consensus 159 ~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~~----------------~~~~~~pe~~a~~~~~~~~~~~~---~~~ 219 (246)
T PRK05599 159 AFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMKP----------------APMSVYPRDVAAAVVSAITSSKR---STT 219 (246)
T ss_pred HHHHHHHHHhcCCCceEEEecCCcccchhhcCCCC----------------CCCCCCHHHHHHHHHHHHhcCCC---Cce
Confidence 99999999999999999999999999998643211 11125799999999999876543 566
Q ss_pred EEeCCCcc
Q 024752 252 ICVDGGYS 259 (263)
Q Consensus 252 i~~dgG~~ 259 (263)
+.++++..
T Consensus 220 ~~~~~~~~ 227 (246)
T PRK05599 220 LWIPGRLR 227 (246)
T ss_pred EEeCccHH
Confidence 77777653
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=263.14 Aligned_cols=242 Identities=30% Similarity=0.408 Sum_probs=207.1
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
..+++++|+++|||++++||+++++.|+++|++|++++|+++..++...+. .+.++.+|+++++++.++++.
T Consensus 3 ~~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~--- 74 (245)
T PRK07060 3 MAFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-----GCEPLRLDVGDDAAIRAALAA--- 74 (245)
T ss_pred cccccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCeEEEecCCCHHHHHHHHHH---
Confidence 446789999999999999999999999999999999999987766554432 256788999999988887765
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccccccCCCCcchhh
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVIAIPMCSIYAS 165 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~ 165 (263)
+ +++|++|||||.....+..+.+.++|++.+++|+.+++.+++++++.+.+++ .++||++||..+..+.++...|++
T Consensus 75 -~-~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~ 152 (245)
T PRK07060 75 -A-GAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCA 152 (245)
T ss_pred -h-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhHH
Confidence 3 6899999999998777777788999999999999999999999999987654 489999999999888888899999
Q ss_pred HHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCC
Q 024752 166 SKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245 (263)
Q Consensus 166 sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~ 245 (263)
+|++++.++++++.++.+.||++++++||+++|++.......... ...+....|.+++.+++|+++++.+++++...
T Consensus 153 sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~ 229 (245)
T PRK07060 153 SKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQK---SGPMLAAIPLGRFAEVDDVAAPILFLLSDAAS 229 (245)
T ss_pred HHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHH---HHHHHhcCCCCCCCCHHHHHHHHHHHcCcccC
Confidence 999999999999999998999999999999999986433222111 13333456788899999999999999998888
Q ss_pred CccCcEEEeCCCcccc
Q 024752 246 YVTGQVICVDGGYSVT 261 (263)
Q Consensus 246 ~~~G~~i~~dgG~~~~ 261 (263)
+++|+.|++|||+..+
T Consensus 230 ~~~G~~~~~~~g~~~~ 245 (245)
T PRK07060 230 MVSGVSLPVDGGYTAR 245 (245)
T ss_pred CccCcEEeECCCccCC
Confidence 9999999999998653
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=263.19 Aligned_cols=232 Identities=22% Similarity=0.299 Sum_probs=201.5
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc-CCceEEEeccCCC--HHHHHHHHHHHHh
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGSVCDLKI--RAQREKLMETVSS 86 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~--~~~~~~~~~~~~~ 86 (263)
+|++|+++||||++|||+++++.|+++|++|++++|+++..++..+++... +..+..+++|+++ .+++.++++++.+
T Consensus 3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~ 82 (239)
T PRK08703 3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAE 82 (239)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHH
Confidence 478899999999999999999999999999999999999888888877654 3356778899975 6788999999888
Q ss_pred hcCCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhh
Q 024752 87 QFDGKLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYAS 165 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~ 165 (263)
.+.+++|++|||||.... .++.+.+.++|++.+++|+.++++++++++|.|.+.+.+++|+++|..+..+.++...|++
T Consensus 83 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~ 162 (239)
T PRK08703 83 ATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGA 162 (239)
T ss_pred HhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccchHH
Confidence 764689999999997643 4677889999999999999999999999999998877899999999999988888899999
Q ss_pred HHHHHHHHHHHHHHHHccC-CcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCC
Q 024752 166 SKVAMNQLTKNLACEWAKD-KIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244 (263)
Q Consensus 166 sK~a~~~~~~~~a~e~~~~-gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~ 244 (263)
||++++.++++++.|+.++ +|+|++|+||+|+|++......... ...+.+++|+++.+.|++++.+
T Consensus 163 sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~ 229 (239)
T PRK08703 163 SKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGEA-------------KSERKSYGDVLPAFVWWASAES 229 (239)
T ss_pred hHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCCCCC-------------ccccCCHHHHHHHHHHHhCccc
Confidence 9999999999999999876 6999999999999998654322111 1134589999999999999999
Q ss_pred CCccCcEEEe
Q 024752 245 SYVTGQVICV 254 (263)
Q Consensus 245 ~~~~G~~i~~ 254 (263)
.++||++|.+
T Consensus 230 ~~~~g~~~~~ 239 (239)
T PRK08703 230 KGRSGEIVYL 239 (239)
T ss_pred cCcCCeEeeC
Confidence 9999999864
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-39 Score=269.68 Aligned_cols=229 Identities=24% Similarity=0.378 Sum_probs=195.1
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|+++++++.++++++.+.+ +
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g 82 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLL-G 82 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHc-C
Confidence 789999999999999999999999999999999999998888888887667778899999999999999999999988 8
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccccccCCCCcchhhHHHH
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
++|++|||||+...+++.+.+.++|++.+++|+.++++++++++|.|.+++ +|+||++||..+..+.++...|+++|++
T Consensus 83 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a 162 (275)
T PRK05876 83 HVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYG 162 (275)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHHHHH
Confidence 999999999998778888899999999999999999999999999998765 6899999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhH-HH--HHHhHhcCC-CCCCCChhhHHHHHHHHc
Q 024752 170 MNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFL-EH--ANRMVLRTP-MLRPGEPNEVSSVVAFLC 240 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~-~~--~~~~~~~~~-~~~~~~~~~va~~~~~l~ 240 (263)
+++|+++++.|+.++||+|++|+||+++|++........... .. ........+ .....+|+|+++.++.-+
T Consensus 163 ~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai 237 (275)
T PRK05876 163 VVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAI 237 (275)
T ss_pred HHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHHHHHHHHHH
Confidence 999999999999999999999999999999865432110000 00 000000011 233578999999987544
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-38 Score=263.53 Aligned_cols=244 Identities=30% Similarity=0.443 Sum_probs=208.3
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc-hhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE-TELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
.|+++|||++++||++++++|+++|++|++++|+. +..++..++++..+.++.++.+|+++++++.++++++.+.+ ++
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~ 80 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAW-GR 80 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhc-CC
Confidence 48999999999999999999999999999999864 44455556665556678999999999999999999999988 78
Q ss_pred ccEEEeCCCCCCC--CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC------CceEEEEccccccccCCCCcch
Q 024752 92 LNILINNAGTFIP--KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG------NGNIIFISSVAGVIAIPMCSIY 163 (263)
Q Consensus 92 id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~~~iv~vsS~~~~~~~~~~~~Y 163 (263)
+|++|||||.... .++.+.+.++|++.+++|+.+++++++++.+.|+++. .++||++||..+..+.++...|
T Consensus 81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y 160 (256)
T PRK12745 81 IDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEY 160 (256)
T ss_pred CCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCccc
Confidence 9999999998643 4567788999999999999999999999999998754 3579999999998888888999
Q ss_pred hhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 164 ASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 164 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
+++|++++.++++++.|+.++||+++.|+||+++|++...... ....... ....|..++.+++|+++++.+++++.
T Consensus 161 ~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~d~a~~i~~l~~~~ 236 (256)
T PRK12745 161 CISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTA--KYDALIA--KGLVPMPRWGEPEDVARAVAALASGD 236 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccch--hHHhhhh--hcCCCcCCCcCHHHHHHHHHHHhCCc
Confidence 9999999999999999999999999999999999987654321 1111111 11357778899999999999999988
Q ss_pred CCCccCcEEEeCCCcccc
Q 024752 244 TSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 244 ~~~~~G~~i~~dgG~~~~ 261 (263)
..+++|+.+++|||.+.+
T Consensus 237 ~~~~~G~~~~i~gg~~~~ 254 (256)
T PRK12745 237 LPYSTGQAIHVDGGLSIP 254 (256)
T ss_pred ccccCCCEEEECCCeecc
Confidence 889999999999998765
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-38 Score=259.42 Aligned_cols=247 Identities=34% Similarity=0.480 Sum_probs=215.1
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCch-hHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET-ELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
|++++|+++|||++++||++++++|+++|++|+++.|+.. ..+...+++...+.++..+.+|+++++++.++++++.+.
T Consensus 1 ~~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (248)
T PRK05557 1 MSLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAE 80 (248)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 5678999999999999999999999999999988777665 355566666656677889999999999999999999988
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+ +++|++||+||.....+..+.+.+.+++.+++|+.+++.+.+++++.+.+.+.+++|++||..+..+.++...|+++|
T Consensus 81 ~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~~sk 159 (248)
T PRK05557 81 F-GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASK 159 (248)
T ss_pred c-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhHHHH
Confidence 7 789999999998877777778899999999999999999999999999887778999999998888888899999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
++++.++++++.++.+.|++++.++||+++|++..... .... .......+.+++.+++|+++++.+|+.+...++
T Consensus 160 ~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~ 234 (248)
T PRK05557 160 AGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALP--EDVK---EAILAQIPLGRLGQPEEIASAVAFLASDEAAYI 234 (248)
T ss_pred HHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccC--hHHH---HHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCc
Confidence 99999999999999999999999999999998865432 1111 233345577778899999999999998878889
Q ss_pred cCcEEEeCCCcccc
Q 024752 248 TGQVICVDGGYSVT 261 (263)
Q Consensus 248 ~G~~i~~dgG~~~~ 261 (263)
+|+.+++|||++++
T Consensus 235 ~g~~~~i~~~~~~~ 248 (248)
T PRK05557 235 TGQTLHVNGGMVMG 248 (248)
T ss_pred cccEEEecCCccCC
Confidence 99999999998864
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-38 Score=260.00 Aligned_cols=242 Identities=37% Similarity=0.523 Sum_probs=209.5
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeC----CchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR----NETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
++++|+++||||+++||+++++.|+++|++|++++| +.+..++..+++...+.++.++.+|++++++++++++++.
T Consensus 3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 82 (249)
T PRK12827 3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGV 82 (249)
T ss_pred CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 367899999999999999999999999999998665 4445555556665556678899999999999999999998
Q ss_pred hhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHh-HHHhhCCCceEEEEccccccccCCCCcchh
Q 024752 86 SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAH-PLLKSAGNGNIIFISSVAGVIAIPMCSIYA 164 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~-~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~ 164 (263)
+.+ +++|++|||||.....++.+.+.++|++.+++|+.+++.+++++. +.|++++.+++|++||..+..+.++...|+
T Consensus 83 ~~~-~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~ 161 (249)
T PRK12827 83 EEF-GRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYA 161 (249)
T ss_pred HHh-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCCchhH
Confidence 887 789999999999877778888999999999999999999999999 676666678999999999988888899999
Q ss_pred hHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCC
Q 024752 165 SSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244 (263)
Q Consensus 165 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~ 244 (263)
.+|++++.++++++.++.+.|++++.++||+++|++....... .+.....|.....+++|+++.+.+++++..
T Consensus 162 ~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~va~~~~~l~~~~~ 234 (249)
T PRK12827 162 ASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPT-------EHLLNPVPVQRLGEPDEVAALVAFLVSDAA 234 (249)
T ss_pred HHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchH-------HHHHhhCCCcCCcCHHHHHHHHHHHcCccc
Confidence 9999999999999999998999999999999999976543211 222334566667789999999999999888
Q ss_pred CCccCcEEEeCCCcc
Q 024752 245 SYVTGQVICVDGGYS 259 (263)
Q Consensus 245 ~~~~G~~i~~dgG~~ 259 (263)
.+++|+.+.+|||..
T Consensus 235 ~~~~g~~~~~~~g~~ 249 (249)
T PRK12827 235 SYVTGQVIPVDGGFC 249 (249)
T ss_pred CCccCcEEEeCCCCC
Confidence 899999999999963
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-39 Score=276.90 Aligned_cols=226 Identities=22% Similarity=0.309 Sum_probs=200.5
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
..+++|+++||||++|||++++++|+++|++|++++|+++.+++..+++...+.++.++.+|++|+++++++++++.+++
T Consensus 4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~ 83 (334)
T PRK07109 4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEEL 83 (334)
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHC
Confidence 35789999999999999999999999999999999999999998888888777889999999999999999999999998
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+++|++|||||.....++.+.+.+++++.+++|+.++++++++++|.|++++.++||++||..+..+.+....|+++|+
T Consensus 84 -g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK~ 162 (334)
T PRK07109 84 -GPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKH 162 (334)
T ss_pred -CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHHHHHH
Confidence 7999999999988777888899999999999999999999999999999887899999999999999889999999999
Q ss_pred HHHHHHHHHHHHHcc--CCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 169 AMNQLTKNLACEWAK--DKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 169 a~~~~~~~~a~e~~~--~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
++++|+++++.|+.. .+|+++.|+||+++|++........ . ....|.....+|+|+|++++++++..
T Consensus 163 a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~~------~--~~~~~~~~~~~pe~vA~~i~~~~~~~ 231 (334)
T PRK07109 163 AIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSRL------P--VEPQPVPPIYQPEVVADAILYAAEHP 231 (334)
T ss_pred HHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhhc------c--ccccCCCCCCCHHHHHHHHHHHHhCC
Confidence 999999999999975 4799999999999999764321100 0 11224456678999999999998754
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=260.32 Aligned_cols=242 Identities=28% Similarity=0.326 Sum_probs=205.4
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeC-CchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-NETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
++..+|+++||||++|||++++++|+++|++|+++++ +.+..+.+.+++...+.++.++.+|++|.+++.++++++.+.
T Consensus 5 ~~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 84 (258)
T PRK09134 5 SMAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAA 84 (258)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3466899999999999999999999999999988765 455666677777666677889999999999999999999888
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+ +++|++|||||.....++.+.+.++|++.+++|+.+++++++++.+.|.+...+++|+++|..+..+.|....|+++|
T Consensus 85 ~-~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~~sK 163 (258)
T PRK09134 85 L-GPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTLSK 163 (258)
T ss_pred c-CCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHHHHH
Confidence 7 799999999998877777888999999999999999999999999999887778999999987777777778899999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
++++.++++++.++.+. |++++|+||++.|+.... .. .........+.++..+++|++++++++++ ..++
T Consensus 164 ~a~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~~~~---~~----~~~~~~~~~~~~~~~~~~d~a~~~~~~~~--~~~~ 233 (258)
T PRK09134 164 AALWTATRTLAQALAPR-IRVNAIGPGPTLPSGRQS---PE----DFARQHAATPLGRGSTPEEIAAAVRYLLD--APSV 233 (258)
T ss_pred HHHHHHHHHHHHHhcCC-cEEEEeecccccCCcccC---hH----HHHHHHhcCCCCCCcCHHHHHHHHHHHhc--CCCc
Confidence 99999999999999875 999999999998864211 01 11222334567778899999999999986 3578
Q ss_pred cCcEEEeCCCcccc
Q 024752 248 TGQVICVDGGYSVT 261 (263)
Q Consensus 248 ~G~~i~~dgG~~~~ 261 (263)
+|+.+.+|||..++
T Consensus 234 ~g~~~~i~gg~~~~ 247 (258)
T PRK09134 234 TGQMIAVDGGQHLA 247 (258)
T ss_pred CCCEEEECCCeecc
Confidence 99999999998654
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=259.97 Aligned_cols=242 Identities=25% Similarity=0.333 Sum_probs=208.7
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
+|+++||||+++||++++++|+++|++|++++|+.+..+++.+++. +.++.++.+|+++++++.++++++.+++ +++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~ 78 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG--DARFVPVACDLTDAASLAAALANAAAER-GPV 78 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence 5899999999999999999999999999999999988877776652 3468889999999999999999999888 789
Q ss_pred cEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHHH
Q 024752 93 NILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQ 172 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~ 172 (263)
|++|||+|.....++.+.+.++|.+.+++|+.+++.+++++++.+.+++.++||++||..+... .+...|+.+|++++.
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-~~~~~y~~sK~a~~~ 157 (257)
T PRK07074 79 DVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA-LGHPAYSAAKAGLIH 157 (257)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC-CCCcccHHHHHHHHH
Confidence 9999999988777777889999999999999999999999999998887899999999776543 456789999999999
Q ss_pred HHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCcEE
Q 024752 173 LTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVI 252 (263)
Q Consensus 173 ~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i 252 (263)
++++++.|+.++||+++.++||+++|++........ .+.........|..++..++|+++++.+|+++...+++|+.+
T Consensus 158 ~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~ 235 (257)
T PRK07074 158 YTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAAN--PQVFEELKKWYPLQDFATPDDVANAVLFLASPAARAITGVCL 235 (257)
T ss_pred HHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCcCCcEE
Confidence 999999999999999999999999999764322111 111122223457788899999999999999988889999999
Q ss_pred EeCCCccc
Q 024752 253 CVDGGYSV 260 (263)
Q Consensus 253 ~~dgG~~~ 260 (263)
++|+|...
T Consensus 236 ~~~~g~~~ 243 (257)
T PRK07074 236 PVDGGLTA 243 (257)
T ss_pred EeCCCcCc
Confidence 99999865
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-38 Score=291.69 Aligned_cols=253 Identities=27% Similarity=0.316 Sum_probs=215.9
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc--CCceEEEeccCCCHHHHHHHHHHHH
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
..++++|++|||||++|||++++++|+++|++|++++|+.+.++...+++... ...+..+.+|+++++++.++++++.
T Consensus 409 ~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~ 488 (676)
T TIGR02632 409 EKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVA 488 (676)
T ss_pred CcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 34578999999999999999999999999999999999998888777776542 2357789999999999999999999
Q ss_pred hhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccccccCCCCcchh
Q 024752 86 SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVIAIPMCSIYA 164 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~ 164 (263)
+.+ +++|++|||||.....++.+.+.++|+..+++|+.+++.+++.+++.|++++ .++||++||..+..+.++..+|+
T Consensus 489 ~~~-g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~aY~ 567 (676)
T TIGR02632 489 LAY-GGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYS 567 (676)
T ss_pred Hhc-CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCHHHH
Confidence 998 8999999999987777788889999999999999999999999999998765 57999999999998888999999
Q ss_pred hHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCC--ccccccccc-------hhHHHHHHhHhcCCCCCCCChhhHHHH
Q 024752 165 SSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTP--LLDTVEKDS-------NFLEHANRMVLRTPMLRPGEPNEVSSV 235 (263)
Q Consensus 165 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~--~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~va~~ 235 (263)
++|++++.++++++.|+.+.||+||+|+||.|.++ +........ ...+....+....++++..+|+|++++
T Consensus 568 aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~peDVA~a 647 (676)
T TIGR02632 568 AAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPADIAEA 647 (676)
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCcCHHHHHHH
Confidence 99999999999999999999999999999999653 221110000 011112234456788899999999999
Q ss_pred HHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 236 VAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 236 ~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
+.+|+++...++||+.|++|||+...
T Consensus 648 v~~L~s~~~~~~TG~~i~vDGG~~~~ 673 (676)
T TIGR02632 648 VFFLASSKSEKTTGCIITVDGGVPAA 673 (676)
T ss_pred HHHHhCCcccCCcCcEEEECCCchhc
Confidence 99999988889999999999998654
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=257.91 Aligned_cols=245 Identities=33% Similarity=0.506 Sum_probs=216.8
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
+++|+++||||+++||+++++.|+++|++|++++|+.++.....+++...+.++.++.+|+++++++.++++++.+.+ +
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~ 82 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDF-G 82 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh-C
Confidence 578999999999999999999999999999999999888887777777666678899999999999999999999888 7
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccc-ccCCCCcchhhHHHH
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGV-IAIPMCSIYASSKVA 169 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~-~~~~~~~~Y~~sK~a 169 (263)
++|++|||+|.....++.+.+.+++++.++.|+.+++.+++.++|.|.+++.+++|++||..+. .+.++...|+.+|++
T Consensus 83 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~~sK~a 162 (251)
T PRK12826 83 RLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKAG 162 (251)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHHHHHHH
Confidence 8999999999887777778899999999999999999999999999988778899999999888 777888899999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccC
Q 024752 170 MNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTG 249 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G 249 (263)
++.++++++.++.+.|++++.++||+++|+......... . ...+....|.+++.+++|+++.+.+++++...+++|
T Consensus 163 ~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g 238 (251)
T PRK12826 163 LVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQ-W---AEAIAAAIPLGRLGEPEDIAAAVLFLASDEARYITG 238 (251)
T ss_pred HHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchH-H---HHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCC
Confidence 999999999999989999999999999999865433211 1 122333567778899999999999999888888999
Q ss_pred cEEEeCCCccc
Q 024752 250 QVICVDGGYSV 260 (263)
Q Consensus 250 ~~i~~dgG~~~ 260 (263)
+.+.+|||..+
T Consensus 239 ~~~~~~~g~~~ 249 (251)
T PRK12826 239 QTLPVDGGATL 249 (251)
T ss_pred cEEEECCCccC
Confidence 99999999865
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=262.17 Aligned_cols=226 Identities=26% Similarity=0.318 Sum_probs=192.8
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
+++|+++||||++|||++++++|+++|++|++++|+.+++++... ..+.++.+|++++++++++++++.+.+ +
T Consensus 1 ~~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~------~~~~~~~~Dv~~~~~~~~~~~~~~~~~-~ 73 (273)
T PRK06182 1 MQKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS------LGVHPLSLDVTDEASIKAAVDTIIAEE-G 73 (273)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh------CCCeEEEeeCCCHHHHHHHHHHHHHhc-C
Confidence 368999999999999999999999999999999999877654432 236788999999999999999999887 7
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHH
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAM 170 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~ 170 (263)
++|++|||||+...+++.+.+.+++++.+++|+.+++.+++.++|.|++++.++||++||..+..+.+....|+++|+++
T Consensus 74 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~ 153 (273)
T PRK06182 74 RIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFAL 153 (273)
T ss_pred CCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHHHHH
Confidence 99999999999887888889999999999999999999999999999988789999999998888888888999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEEecCcccCCccccccc-------cchhHH----HHHHhHhcCCCCCCCChhhHHHHHHHH
Q 024752 171 NQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEK-------DSNFLE----HANRMVLRTPMLRPGEPNEVSSVVAFL 239 (263)
Q Consensus 171 ~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~-------~~~~~~----~~~~~~~~~~~~~~~~~~~va~~~~~l 239 (263)
++++++++.|+.+.||++++|+||+++|++...... ...... ....+....+.++..+|+|+|++++++
T Consensus 154 ~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~ 233 (273)
T PRK06182 154 EGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVIADAISKA 233 (273)
T ss_pred HHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHH
Confidence 999999999999999999999999999998532110 011111 112333445677888999999999999
Q ss_pred cCCC
Q 024752 240 CLSA 243 (263)
Q Consensus 240 ~s~~ 243 (263)
++..
T Consensus 234 ~~~~ 237 (273)
T PRK06182 234 VTAR 237 (273)
T ss_pred HhCC
Confidence 8743
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-37 Score=254.83 Aligned_cols=246 Identities=37% Similarity=0.503 Sum_probs=217.2
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
|++.+|+++||||+++||+++++.|+++|++|++++|++++.+....++...+.++.++.+|+++++++.++++++.+.+
T Consensus 1 ~~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (246)
T PRK05653 1 MSLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAF 80 (246)
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 46778999999999999999999999999999999999988888787777667788899999999999999999998887
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+++|++||++|.....+..+.+.+++++.++.|+.+++++++++.|+|.+.+.++||++||..+..+.+....|+.+|+
T Consensus 81 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~ 159 (246)
T PRK05653 81 -GALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKA 159 (246)
T ss_pred -CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHhHHH
Confidence 7899999999988777777889999999999999999999999999998877789999999988888888889999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCcc
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~ 248 (263)
+++.+++++++++.+.|++++.++||.+.+++...... .. ........|...+.+++|+++.+.+++++...+++
T Consensus 160 ~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~ 234 (246)
T PRK05653 160 GVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPE--EV---KAEILKEIPLGRLGQPEEVANAVAFLASDAASYIT 234 (246)
T ss_pred HHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhH--HH---HHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCcc
Confidence 99999999999999889999999999999987653211 11 12233345667788999999999999998888899
Q ss_pred CcEEEeCCCccc
Q 024752 249 GQVICVDGGYSV 260 (263)
Q Consensus 249 G~~i~~dgG~~~ 260 (263)
|+.++++||..+
T Consensus 235 g~~~~~~gg~~~ 246 (246)
T PRK05653 235 GQVIPVNGGMYM 246 (246)
T ss_pred CCEEEeCCCeeC
Confidence 999999999753
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-38 Score=268.34 Aligned_cols=237 Identities=19% Similarity=0.204 Sum_probs=196.4
Q ss_pred EEecCCCchHHHHHHHHHHCC-CeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCccEE
Q 024752 17 LVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNIL 95 (263)
Q Consensus 17 lVtGas~giG~~~a~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~l 95 (263)
+||||++|||++++++|+++| ++|++++|+.+..++..+++...+.++.++.+|+++.++++++++++.+.+ +++|++
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~-~~iD~l 79 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSG-RPLDVL 79 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcC-CCCCEE
Confidence 699999999999999999999 999999999988888877775445568889999999999999999998876 789999
Q ss_pred EeCCCCCCC-CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC--CceEEEEcccccccc----------------
Q 024752 96 INNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG--NGNIIFISSVAGVIA---------------- 156 (263)
Q Consensus 96 i~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~vsS~~~~~~---------------- 156 (263)
|||||+... .+..+.+.++|++.|++|+.|++.++++++|.|++++ .|+||++||..+..+
T Consensus 80 InnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~ 159 (308)
T PLN00015 80 VCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLR 159 (308)
T ss_pred EECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhh
Confidence 999998644 3456788999999999999999999999999998875 589999999876421
Q ss_pred -------------------CCCCcchhhHHHHHHHHHHHHHHHHcc-CCcEEEEEecCcc-cCCccccccccchhHHHHH
Q 024752 157 -------------------IPMCSIYASSKVAMNQLTKNLACEWAK-DKIRVNTVAPWVI-RTPLLDTVEKDSNFLEHAN 215 (263)
Q Consensus 157 -------------------~~~~~~Y~~sK~a~~~~~~~~a~e~~~-~gi~v~~v~PG~v-~t~~~~~~~~~~~~~~~~~ 215 (263)
.++..+|++||+|...+++.+++++.+ .||+|++|+||+| .|++.+..... .....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~---~~~~~ 236 (308)
T PLN00015 160 GLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPL---FRLLF 236 (308)
T ss_pred hhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHH---HHHHH
Confidence 123467999999999999999999975 6999999999999 78887543211 11111
Q ss_pred HhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCC
Q 024752 216 RMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGG 257 (263)
Q Consensus 216 ~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG 257 (263)
......+.+++.+|++.++.+++++++.....+|+.+..||+
T Consensus 237 ~~~~~~~~~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~~g~ 278 (308)
T PLN00015 237 PPFQKYITKGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWNGG 278 (308)
T ss_pred HHHHHHHhcccccHHHhhhhhhhhccccccCCCccccccCCc
Confidence 111233455678899999999999998877899999999886
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-37 Score=255.19 Aligned_cols=247 Identities=32% Similarity=0.396 Sum_probs=205.9
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeC-CchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-NETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
+++++|+++||||+++||++++++|+++|++|++..| +.+...+....+...+.++..+.+|+++++++.++++++.+.
T Consensus 2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (252)
T PRK06077 2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDR 81 (252)
T ss_pred CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999887765 444455555556555667788999999999999999999998
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+ +++|++|||||.....++.+.+.+.+++.+++|+.+++.+++++.|.|++ .+++|++||..+..+.++...|+++|
T Consensus 82 ~-~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK 158 (252)
T PRK06077 82 Y-GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE--GGAIVNIASVAGIRPAYGLSIYGAMK 158 (252)
T ss_pred c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc--CcEEEEEcchhccCCCCCchHHHHHH
Confidence 8 79999999999987777777889999999999999999999999999876 47999999999998889999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
++++.++++++.|+++ +|+++.+.||+++|++............ ........+.+++.+|+|++++++++++. ..+
T Consensus 159 ~~~~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~dva~~~~~~~~~--~~~ 234 (252)
T PRK06077 159 AAVINLTKYLALELAP-KIRVNAIAPGFVKTKLGESLFKVLGMSE-KEFAEKFTLMGKILDPEEVAEFVAAILKI--ESI 234 (252)
T ss_pred HHHHHHHHHHHHHHhc-CCEEEEEeeCCccChHHHhhhhcccccH-HHHHHhcCcCCCCCCHHHHHHHHHHHhCc--ccc
Confidence 9999999999999988 9999999999999997644322111000 01111223456778999999999998863 357
Q ss_pred cCcEEEeCCCccccC
Q 024752 248 TGQVICVDGGYSVTG 262 (263)
Q Consensus 248 ~G~~i~~dgG~~~~~ 262 (263)
+|+.+++|+|+.+.+
T Consensus 235 ~g~~~~i~~g~~~~~ 249 (252)
T PRK06077 235 TGQVFVLDSGESLKG 249 (252)
T ss_pred CCCeEEecCCeeccC
Confidence 899999999998764
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-37 Score=254.19 Aligned_cols=233 Identities=30% Similarity=0.385 Sum_probs=199.8
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
+++|+++||||+++||++++++|+++|++|++++|+.+.. . ...++.+|++++++++++++++.+.+
T Consensus 1 ~~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~---------~--~~~~~~~D~~~~~~~~~~~~~~~~~~-- 67 (234)
T PRK07577 1 MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD---------F--PGELFACDLADIEQTAATLAQINEIH-- 67 (234)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc---------c--CceEEEeeCCCHHHHHHHHHHHHHhC--
Confidence 3579999999999999999999999999999999987541 0 12467899999999999999988875
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHH
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAM 170 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~ 170 (263)
++|++|||+|.....++.+.+.+++++.+++|+.+++.+.++++|.|++++.++||++||.. ..+.+....|+++|+++
T Consensus 68 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~-~~~~~~~~~Y~~sK~a~ 146 (234)
T PRK07577 68 PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRA-IFGALDRTSYSAAKSAL 146 (234)
T ss_pred CCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccc-ccCCCCchHHHHHHHHH
Confidence 58999999999877777788999999999999999999999999999988788999999985 34667788999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCc
Q 024752 171 NQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQ 250 (263)
Q Consensus 171 ~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~ 250 (263)
+.++++++.|+.++||++++|+||+++|++.......... .........|..+...|+|+++.+.+|+++...+++|+
T Consensus 147 ~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~ 224 (234)
T PRK07577 147 VGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSE--EEKRVLASIPMRRLGTPEEVAAAIAFLLSDDAGFITGQ 224 (234)
T ss_pred HHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchh--HHHHHhhcCCCCCCcCHHHHHHHHHHHhCcccCCccce
Confidence 9999999999999999999999999999987543221111 11223335677777899999999999999888899999
Q ss_pred EEEeCCCcc
Q 024752 251 VICVDGGYS 259 (263)
Q Consensus 251 ~i~~dgG~~ 259 (263)
.+.+|||.+
T Consensus 225 ~~~~~g~~~ 233 (234)
T PRK07577 225 VLGVDGGGS 233 (234)
T ss_pred EEEecCCcc
Confidence 999999975
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-37 Score=259.31 Aligned_cols=217 Identities=25% Similarity=0.352 Sum_probs=193.3
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
|++++|+++||||++|||++++++|+++|++|++++|+++.+++..+++. ++.++.+|+++++++.++++++.+.+
T Consensus 1 ~~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (273)
T PRK07825 1 DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG----LVVGGPLDVTDPASFAAFLDAVEADL 76 (273)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----cceEEEccCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999999999999999999988777666543 46788999999999999999999988
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+++|++|||||+....++.+.+.+++++++++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|+++|+
T Consensus 77 -~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 155 (273)
T PRK07825 77 -GPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKH 155 (273)
T ss_pred -CCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHHHH
Confidence 7899999999998877888889999999999999999999999999999988899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCC
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~ 244 (263)
++++|+++++.|+.++||+++.|+||+++|++....... ......+++|+++.++.++....
T Consensus 156 a~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~~~--------------~~~~~~~~~~va~~~~~~l~~~~ 217 (273)
T PRK07825 156 AVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTGGA--------------KGFKNVEPEDVAAAIVGTVAKPR 217 (273)
T ss_pred HHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhcccccc--------------cCCCCCCHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999999986543110 11235689999999988876543
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=252.21 Aligned_cols=240 Identities=30% Similarity=0.368 Sum_probs=205.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEE-eeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHT-CSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
|+++||||+++||++++++|+++|++|++ ..|+++..++...++...+.++..+++|++++++++++++++.+.+ +++
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~-~~i 80 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHD-EPL 80 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhC-CCC
Confidence 68999999999999999999999999876 5688877777777776666678889999999999999999998887 899
Q ss_pred cEEEeCCCCCCC-CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC---CceEEEEccccccccCCC-CcchhhHH
Q 024752 93 NILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG---NGNIIFISSVAGVIAIPM-CSIYASSK 167 (263)
Q Consensus 93 d~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~iv~vsS~~~~~~~~~-~~~Y~~sK 167 (263)
|++|||||.... .++.+.+.++|+..+++|+.+++.+++++++.|.++. .++||++||..+..+.++ ...|+++|
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~sK 160 (247)
T PRK09730 81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASK 160 (247)
T ss_pred CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHhHH
Confidence 999999997633 5567788999999999999999999999999998753 578999999988877775 46899999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
++++.++++++.|+.+.||++++++||+++|++...... .. .........|..+..+++|+++.+.+++++...++
T Consensus 161 ~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~ 236 (247)
T PRK09730 161 GAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGE-PG---RVDRVKSNIPMQRGGQPEEVAQAIVWLLSDKASYV 236 (247)
T ss_pred HHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCC-HH---HHHHHHhcCCCCCCcCHHHHHHHHHhhcChhhcCc
Confidence 999999999999999999999999999999997543211 11 11233345677777899999999999999888899
Q ss_pred cCcEEEeCCCc
Q 024752 248 TGQVICVDGGY 258 (263)
Q Consensus 248 ~G~~i~~dgG~ 258 (263)
+|+.+.+|||.
T Consensus 237 ~g~~~~~~g~~ 247 (247)
T PRK09730 237 TGSFIDLAGGK 247 (247)
T ss_pred cCcEEecCCCC
Confidence 99999999984
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-37 Score=276.36 Aligned_cols=238 Identities=26% Similarity=0.327 Sum_probs=203.2
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc--hhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE--TELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
+++|+++|||+++|||++++++|+++|++|++++|.. +.+++..+++ + ...+.+|++++++++++++.+.+.+
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~---~--~~~~~~Dv~~~~~~~~~~~~~~~~~ 282 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV---G--GTALALDITAPDAPARIAEHLAERH 282 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc---C--CeEEEEeCCCHHHHHHHHHHHHHhC
Confidence 6789999999999999999999999999999999853 2233333222 2 3567899999999999999999887
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+++|++|||||+.....+.+.+.++|++.+++|+.+++++.+++.+.+..+++++||++||..+..+.++...|+++|+
T Consensus 283 -g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~asKa 361 (450)
T PRK08261 283 -GGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASKA 361 (450)
T ss_pred -CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHHHHHH
Confidence 7899999999998877788899999999999999999999999999766556789999999999988889999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCcc
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~ 248 (263)
++++|+++++.|+.++||++|+|+||+++|++....... .. +......++.+...|+|+++++.||+++.+.++|
T Consensus 362 al~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~--~~---~~~~~~~~l~~~~~p~dva~~~~~l~s~~~~~it 436 (450)
T PRK08261 362 GVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPFA--TR---EAGRRMNSLQQGGLPVDVAETIAWLASPASGGVT 436 (450)
T ss_pred HHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccchh--HH---HHHhhcCCcCCCCCHHHHHHHHHHHhChhhcCCC
Confidence 999999999999999999999999999999887543211 11 1111234566778899999999999999999999
Q ss_pred CcEEEeCCCcc
Q 024752 249 GQVICVDGGYS 259 (263)
Q Consensus 249 G~~i~~dgG~~ 259 (263)
|+.|.+|||..
T Consensus 437 G~~i~v~g~~~ 447 (450)
T PRK08261 437 GNVVRVCGQSL 447 (450)
T ss_pred CCEEEECCCcc
Confidence 99999999754
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=251.00 Aligned_cols=238 Identities=30% Similarity=0.409 Sum_probs=207.3
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
.+.+++|+++|||++++||++++++|+++|++|++++|++.+..+..+++... .+..+.+|+++.+++.++++++.+.
T Consensus 2 ~~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (239)
T PRK12828 2 EHSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD--ALRIGGIDLVDPQAARRAVDEVNRQ 79 (239)
T ss_pred CCCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc--CceEEEeecCCHHHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999999988777666665443 3566789999999999999999998
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+ +++|++||++|.....+..+.+.+++++.+++|+.+++.+++++++.|++++.+++|++||..+..+.++...|+++|
T Consensus 80 ~-~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk 158 (239)
T PRK12828 80 F-GRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAK 158 (239)
T ss_pred h-CCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcchhHHHH
Confidence 8 799999999998766666677899999999999999999999999999887789999999999888888889999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
++++.++++++.++.+.|++++.+.||++++++....... .+...+.+++|+++++.+++++...++
T Consensus 159 ~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~~-------------~~~~~~~~~~dva~~~~~~l~~~~~~~ 225 (239)
T PRK12828 159 AGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMPD-------------ADFSRWVTPEQIAAVIAFLLSDEAQAI 225 (239)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCCc-------------hhhhcCCCHHHHHHHHHHHhCcccccc
Confidence 9999999999999988899999999999999854322111 122346789999999999999877789
Q ss_pred cCcEEEeCCCcccc
Q 024752 248 TGQVICVDGGYSVT 261 (263)
Q Consensus 248 ~G~~i~~dgG~~~~ 261 (263)
+|+.+.+|||..++
T Consensus 226 ~g~~~~~~g~~~~~ 239 (239)
T PRK12828 226 TGASIPVDGGVALP 239 (239)
T ss_pred cceEEEecCCEeCc
Confidence 99999999998653
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-37 Score=257.37 Aligned_cols=240 Identities=27% Similarity=0.317 Sum_probs=200.8
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
.+|+++||||+++||++++++|+++|++|++++|+.+.+++..+.+ +..+..+++|+++++++.++++++.+.+ ++
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~ 77 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY---GDRLLPLALDVTDRAAVFAAVETAVEHF-GR 77 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc---cCCeeEEEccCCCHHHHHHHHHHHHHHc-CC
Confidence 4789999999999999999999999999999999988776655432 3457888999999999999999999887 78
Q ss_pred ccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHH
Q 024752 92 LNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMN 171 (263)
Q Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~ 171 (263)
+|++|||||.....++.+.+.++|++.+++|+.+++.+++.++|.|++++.+++|++||..+..+.+....|+++|++++
T Consensus 78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~ 157 (275)
T PRK08263 78 LDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALE 157 (275)
T ss_pred CCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHHHHHH
Confidence 99999999998888888899999999999999999999999999999887889999999999999899999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEEecCcccCCccccccc----cchhHHHHHHhHhcCCCCCC-CChhhHHHHHHHHcCCCCCC
Q 024752 172 QLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEK----DSNFLEHANRMVLRTPMLRP-GEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 172 ~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~va~~~~~l~s~~~~~ 246 (263)
.++++++.|+.+.||+++.++||+++|++...... ...............+...+ .+|+|+++.+++++....
T Consensus 158 ~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l~~~~~-- 235 (275)
T PRK08263 158 GMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAAEALLKLVDAEN-- 235 (275)
T ss_pred HHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHHHHHHHHHcCCC--
Confidence 99999999999999999999999999998742211 11111111223333455666 899999999999987542
Q ss_pred ccCcEEEeCCC
Q 024752 247 VTGQVICVDGG 257 (263)
Q Consensus 247 ~~G~~i~~dgG 257 (263)
..++.+...++
T Consensus 236 ~~~~~~~~~~~ 246 (275)
T PRK08263 236 PPLRLFLGSGV 246 (275)
T ss_pred CCeEEEeCchH
Confidence 24566654443
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-37 Score=239.26 Aligned_cols=248 Identities=25% Similarity=0.360 Sum_probs=220.5
Q ss_pred CCCCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 9 WSLKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 9 ~~~~~k~vlVtGas--~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
..|+||+.||+|-. ++|+..||+.|.++|+++..+..++ ++++...++.+.-.....++||++++++++++++++.+
T Consensus 2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~ 80 (259)
T COG0623 2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKK 80 (259)
T ss_pred CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHH
Confidence 46899999999987 6999999999999999999999887 66666666655434467789999999999999999999
Q ss_pred hcCCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcc
Q 024752 87 QFDGKLNILINNAGTFIP----KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSI 162 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~ 162 (263)
++ +++|.+||+.+..+. +.+.+.+.|.|...+++..++...+.+++.|.|.. +|.+|.++-..+....|.+..
T Consensus 81 ~~-g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~--ggSiltLtYlgs~r~vPnYNv 157 (259)
T COG0623 81 KW-GKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN--GGSILTLTYLGSERVVPNYNV 157 (259)
T ss_pred hh-CcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC--CCcEEEEEeccceeecCCCch
Confidence 99 899999999998863 56777999999999999999999999999999977 789999999888889999999
Q ss_pred hhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCC
Q 024752 163 YASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS 242 (263)
Q Consensus 163 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~ 242 (263)
.+.+|++||+-+|.+|.+++++|||||.|+-|++.|=-.+.... +.....+.....|+++..+.|||.+...||+||
T Consensus 158 MGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~---f~~~l~~~e~~aPl~r~vt~eeVG~tA~fLlSd 234 (259)
T COG0623 158 MGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGD---FRKMLKENEANAPLRRNVTIEEVGNTAAFLLSD 234 (259)
T ss_pred hHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhcccc---HHHHHHHHHhhCCccCCCCHHHhhhhHHHHhcc
Confidence 99999999999999999999999999999999999865544432 333345566678999999999999999999999
Q ss_pred CCCCccCcEEEeCCCccccCC
Q 024752 243 ATSYVTGQVICVDGGYSVTGF 263 (263)
Q Consensus 243 ~~~~~~G~~i~~dgG~~~~~~ 263 (263)
-++-+||+++.+|+|+++.||
T Consensus 235 LssgiTGei~yVD~G~~i~~m 255 (259)
T COG0623 235 LSSGITGEIIYVDSGYHIMGM 255 (259)
T ss_pred hhcccccceEEEcCCceeecc
Confidence 999999999999999999987
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-36 Score=252.50 Aligned_cols=250 Identities=35% Similarity=0.521 Sum_probs=212.0
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
...++++|+++||||+++||++++++|+++|++|++++|+.+..++..++.... ++.++.+|+++++++.++++++.+
T Consensus 5 ~~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~ 82 (264)
T PRK12829 5 LLKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGA--KVTATVADVADPAQVERVFDTAVE 82 (264)
T ss_pred HhhccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcC--ceEEEEccCCCHHHHHHHHHHHHH
Confidence 445688999999999999999999999999999999999988777666554332 578899999999999999999998
Q ss_pred hcCCCccEEEeCCCCC-CCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCC-ceEEEEccccccccCCCCcchh
Q 024752 87 QFDGKLNILINNAGTF-IPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGN-GNIIFISSVAGVIAIPMCSIYA 164 (263)
Q Consensus 87 ~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~iv~vsS~~~~~~~~~~~~Y~ 164 (263)
.+ +++|+|||+||.. ...+....+.+++++.+++|+.+++++++.+++.+.+.+. ++|+++||..+..+.+....|+
T Consensus 83 ~~-~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~ 161 (264)
T PRK12829 83 RF-GGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYA 161 (264)
T ss_pred Hh-CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhH
Confidence 88 7899999999987 4455667889999999999999999999999999887665 7899999988888888888999
Q ss_pred hHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccccc------chhHHHHHHhHhcCCCCCCCChhhHHHHHHH
Q 024752 165 SSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKD------SNFLEHANRMVLRTPMLRPGEPNEVSSVVAF 238 (263)
Q Consensus 165 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ 238 (263)
.+|++++.+++.++.++...++++++++||+++|++....... ..............|..++.+++|+++++.+
T Consensus 162 ~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~ 241 (264)
T PRK12829 162 ASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATALF 241 (264)
T ss_pred HHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 9999999999999999988899999999999999986543221 1111122333344577778999999999999
Q ss_pred HcCCCCCCccCcEEEeCCCcc
Q 024752 239 LCLSATSYVTGQVICVDGGYS 259 (263)
Q Consensus 239 l~s~~~~~~~G~~i~~dgG~~ 259 (263)
++++....++|+.+++|||..
T Consensus 242 l~~~~~~~~~g~~~~i~~g~~ 262 (264)
T PRK12829 242 LASPAARYITGQAISVDGNVE 262 (264)
T ss_pred HcCccccCccCcEEEeCCCcc
Confidence 998777789999999999975
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-37 Score=263.04 Aligned_cols=241 Identities=22% Similarity=0.243 Sum_probs=193.0
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
+..++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++. .+.++.+|+++.++++++++++.+
T Consensus 20 ~~~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~----~v~~~~~Dl~d~~~v~~~~~~~~~ 95 (315)
T PRK06196 20 AGHDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID----GVEVVMLDLADLESVRAFAERFLD 95 (315)
T ss_pred cCCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh----hCeEEEccCCCHHHHHHHHHHHHh
Confidence 3467899999999999999999999999999999999999988877776653 267889999999999999999998
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccc-----------
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVI----------- 155 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~----------- 155 (263)
.+ +++|+||||||+.... .+.+.++|+..+++|+.+++.++++++|.|++++.++||++||..+..
T Consensus 96 ~~-~~iD~li~nAg~~~~~--~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~ 172 (315)
T PRK06196 96 SG-RRIDILINNAGVMACP--ETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFT 172 (315)
T ss_pred cC-CCCCEEEECCCCCCCC--CccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCcc
Confidence 87 7999999999986432 345678899999999999999999999999987778999999976532
Q ss_pred -cCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhH-hcCCCC-CCCChhhH
Q 024752 156 -AIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMV-LRTPML-RPGEPNEV 232 (263)
Q Consensus 156 -~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~v 232 (263)
+.++...|+.||++++.+++.++.++.++||++++|+||+++|++........... ..... ...|+. +..+|+++
T Consensus 173 ~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 250 (315)
T PRK06196 173 RGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVA--LGWVDEHGNPIDPGFKTPAQG 250 (315)
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhh--hhhhhhhhhhhhhhcCCHhHH
Confidence 22345679999999999999999999999999999999999999875543211110 00110 112222 45789999
Q ss_pred HHHHHHHcCCCCCCccCcEEEeCC
Q 024752 233 SSVVAFLCLSATSYVTGQVICVDG 256 (263)
Q Consensus 233 a~~~~~l~s~~~~~~~G~~i~~dg 256 (263)
+..++||++......+|..+..|.
T Consensus 251 a~~~~~l~~~~~~~~~~g~~~~~~ 274 (315)
T PRK06196 251 AATQVWAATSPQLAGMGGLYCEDC 274 (315)
T ss_pred HHHHHHHhcCCccCCCCCeEeCCC
Confidence 999999997554444555555453
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=250.47 Aligned_cols=227 Identities=28% Similarity=0.320 Sum_probs=198.8
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
++|+++|||++++||++++++|+++|++|++++|+++..+++.+++.+.+.++.++.+|+++++++.++++.+.+.+ ++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~ 83 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQF-GC 83 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHc-CC
Confidence 46899999999999999999999999999999999988888877777666778899999999999999999999988 78
Q ss_pred ccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHH
Q 024752 92 LNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMN 171 (263)
Q Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~ 171 (263)
+|++|||||.....++.+.+.+++++.+++|+.+++++++.++|.|.+++.++||++||..+..+.++...|+.+|++++
T Consensus 84 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~ 163 (241)
T PRK07454 84 PDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALA 163 (241)
T ss_pred CCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHHHHHHHH
Confidence 99999999988777777888999999999999999999999999999887899999999999888888999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCc
Q 024752 172 QLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQ 250 (263)
Q Consensus 172 ~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~ 250 (263)
.++++++.|+.+.||+++.|+||+++|++........ ........+++|+++++.+++++....+.+.
T Consensus 164 ~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~~~~-----------~~~~~~~~~~~~va~~~~~l~~~~~~~~~~~ 231 (241)
T PRK07454 164 AFTKCLAEEERSHGIRVCTITLGAVNTPLWDTETVQA-----------DFDRSAMLSPEQVAQTILHLAQLPPSAVIED 231 (241)
T ss_pred HHHHHHHHHhhhhCCEEEEEecCcccCCccccccccc-----------ccccccCCCHHHHHHHHHHHHcCCccceeee
Confidence 9999999999999999999999999999854211110 0112345789999999999999765554444
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-37 Score=257.26 Aligned_cols=245 Identities=22% Similarity=0.306 Sum_probs=205.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCc-eEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQ-VSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.. ..++.+|++++++++++++++.+.+ +++
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i 79 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAH-GSM 79 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhc-CCC
Confidence 57999999999999999999999999999999998888887777654443 4567899999999999999999887 789
Q ss_pred cEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-CCceEEEEccccccccCCCCcchhhHHHHHH
Q 024752 93 NILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-GNGNIIFISSVAGVIAIPMCSIYASSKVAMN 171 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~ 171 (263)
|++|||+|.....++.+.+.++|++.+++|+.+++.++++++|.|.++ ..++||++||..+..+.++...|+++|++++
T Consensus 80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~ 159 (272)
T PRK07832 80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLR 159 (272)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHHHH
Confidence 999999998877778889999999999999999999999999999764 3589999999998888888999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEEecCcccCCccccccccc-h-hHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccC
Q 024752 172 QLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDS-N-FLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTG 249 (263)
Q Consensus 172 ~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G 249 (263)
+++++++.|+.++||+|+.|+||+++|++........ . ..+....+... ..++..+|+|+|+.+++++. ...++++
T Consensus 160 ~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~vA~~~~~~~~-~~~~~~~ 237 (272)
T PRK07832 160 GLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDR-FRGHAVTPEKAAEKILAGVE-KNRYLVY 237 (272)
T ss_pred HHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHh-cccCCCCHHHHHHHHHHHHh-cCCeEEe
Confidence 9999999999999999999999999999876532110 0 00001111111 24556799999999999885 5578889
Q ss_pred cEEEeCCCcccc
Q 024752 250 QVICVDGGYSVT 261 (263)
Q Consensus 250 ~~i~~dgG~~~~ 261 (263)
+.+.+++|+.+.
T Consensus 238 ~~~~~~~~~~~~ 249 (272)
T PRK07832 238 TSPDIRALYWFK 249 (272)
T ss_pred cCcchHHHHHHH
Confidence 988888886654
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-36 Score=249.61 Aligned_cols=247 Identities=34% Similarity=0.449 Sum_probs=211.2
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
+|++||||++++||+++++.|+++|++|++++|+.+..+.+.+++...+.++..+.+|+++++++.++++++.+.+ +++
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~ 79 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEF-GGL 79 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc-CCC
Confidence 5789999999999999999999999999999999988888877776666678899999999999999999999887 789
Q ss_pred cEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHHH
Q 024752 93 NILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQ 172 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~ 172 (263)
|++|||||.....+..+.+.+++++.+++|+.+++.+++++++.|++.+.+++|++||..+..+.+....|+.+|++++.
T Consensus 80 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~~ 159 (255)
T TIGR01963 80 DILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIG 159 (255)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHHHHHHHHH
Confidence 99999999887766677789999999999999999999999999988878899999999888888889999999999999
Q ss_pred HHHHHHHHHccCCcEEEEEecCcccCCccccccccc------hhHHHH-HHhHhcCCCCCCCChhhHHHHHHHHcCCCCC
Q 024752 173 LTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDS------NFLEHA-NRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245 (263)
Q Consensus 173 ~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~ 245 (263)
++++++.++.+.||+++.++||++++++........ ...... .......+...+.+++|+++++++++++...
T Consensus 160 ~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~ 239 (255)
T TIGR01963 160 LTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFLASDAAA 239 (255)
T ss_pred HHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHHcCcccc
Confidence 999999999888999999999999998754322110 000000 1122233555688999999999999987666
Q ss_pred CccCcEEEeCCCccc
Q 024752 246 YVTGQVICVDGGYSV 260 (263)
Q Consensus 246 ~~~G~~i~~dgG~~~ 260 (263)
.++|+.+++|||++.
T Consensus 240 ~~~g~~~~~~~g~~~ 254 (255)
T TIGR01963 240 GITGQAIVLDGGWTA 254 (255)
T ss_pred CccceEEEEcCcccc
Confidence 789999999999874
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=254.46 Aligned_cols=226 Identities=23% Similarity=0.300 Sum_probs=196.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
|+++||||+||||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|+++++++.++++++.+.+ +++|
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~-~~id 79 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKW-GGID 79 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence 579999999999999999999999999999999999888888887777788999999999999999999999887 7899
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHHHH
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQL 173 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~ 173 (263)
++|||||....+.+.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|+++|++++++
T Consensus 80 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~ 159 (270)
T PRK05650 80 VIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVAL 159 (270)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHHHHH
Confidence 99999999888888888999999999999999999999999999888778999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 174 TKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 174 ~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
+++++.|+.+.||+++.|+||+++|++........... ...........+.+++|+|+.++..+...
T Consensus 160 ~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~vA~~i~~~l~~~ 226 (270)
T PRK05650 160 SETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAM---KAQVGKLLEKSPITAADIADYIYQQVAKG 226 (270)
T ss_pred HHHHHHHhcccCcEEEEEecCccccCcccccccCchhH---HHHHHHHhhcCCCCHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999876543322111 11111111233468999999998777543
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=257.18 Aligned_cols=220 Identities=26% Similarity=0.367 Sum_probs=190.1
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
+.+++++|+++||||++|||+++++.|+++|++|++++|+.+.++++.+++...+.++.++.+|++|++++.++++++.+
T Consensus 34 ~~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 113 (293)
T PRK05866 34 QPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEK 113 (293)
T ss_pred CCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 45678899999999999999999999999999999999999988888888876666788999999999999999999999
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCC--CHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccc-cCCCCcch
Q 024752 87 QFDGKLNILINNAGTFIPKETTEF--TEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVI-AIPMCSIY 163 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-~~~~~~~Y 163 (263)
.+ +++|++|||||.....++.+. +++++++.+++|+.|++.++++++|.|++++.++||++||.++.. +.++...|
T Consensus 114 ~~-g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~~~Y 192 (293)
T PRK05866 114 RI-GGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVY 192 (293)
T ss_pred Hc-CCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCcchH
Confidence 88 799999999998876655442 468899999999999999999999999988889999999976654 35777899
Q ss_pred hhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcC
Q 024752 164 ASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCL 241 (263)
Q Consensus 164 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s 241 (263)
+++|+|+++|+++++.|+.++||++++|+||+++|++........ . ....+|+++|+.++..+.
T Consensus 193 ~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~~~~-------------~-~~~~~pe~vA~~~~~~~~ 256 (293)
T PRK05866 193 NASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTKAYD-------------G-LPALTADEAAEWMVTAAR 256 (293)
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccccccccc-------------C-CCCCCHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999875321100 1 123579999998877664
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=280.24 Aligned_cols=236 Identities=22% Similarity=0.235 Sum_probs=202.6
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
....+++++++||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++.+|+++++++.++++++.+
T Consensus 309 ~~~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 388 (582)
T PRK05855 309 PRGPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRA 388 (582)
T ss_pred ccccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 34567889999999999999999999999999999999999999888888877777889999999999999999999998
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccccccCCCCcchhh
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVIAIPMCSIYAS 165 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~ 165 (263)
.+ +++|++|||||+...+++.+.+.+++++++++|+.|+++++++++|.|.+++ +|+||++||.++..+.++...|++
T Consensus 389 ~~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~ 467 (582)
T PRK05855 389 EH-GVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYAT 467 (582)
T ss_pred hc-CCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHH
Confidence 88 8999999999998878888899999999999999999999999999998875 489999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchh---HHHHHHhHhcCCCCCCCChhhHHHHHHHHcCC
Q 024752 166 SKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNF---LEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS 242 (263)
Q Consensus 166 sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~ 242 (263)
||+++++++++++.|++++||+|++|+||+|+|++.......... .+.........+..+..+|+++++.+++.++.
T Consensus 468 sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~~~~~ 547 (582)
T PRK05855 468 SKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPEKVAKAIVDAVKR 547 (582)
T ss_pred HHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhccccCCCHHHHHHHHHHHHHc
Confidence 999999999999999999999999999999999987654211100 00001111122233445899999999998865
Q ss_pred C
Q 024752 243 A 243 (263)
Q Consensus 243 ~ 243 (263)
.
T Consensus 548 ~ 548 (582)
T PRK05855 548 N 548 (582)
T ss_pred C
Confidence 4
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-36 Score=247.29 Aligned_cols=244 Identities=35% Similarity=0.528 Sum_probs=210.6
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCC-chhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN-ETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
++.|+++||||+|+||++++++|+++|++|++..|+ .+..+...+.+...+.++.++.+|+++++++.++++++.+.+
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~- 82 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERF- 82 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHc-
Confidence 567899999999999999999999999998775655 444555566666566778899999999999999999998887
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
+++|++||+||.....++.+.+.+++++.+++|+.+++++++.+++.+++.+.+++|++||..+..+.++...|+.+|++
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~~sK~~ 162 (249)
T PRK12825 83 GRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAG 162 (249)
T ss_pred CCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHHHHHHH
Confidence 78999999999877777778899999999999999999999999999988878899999999998888888999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccC
Q 024752 170 MNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTG 249 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G 249 (263)
++.+++.++.++.+.|++++.++||+++|++.......... .. ....|.+++.+++|+++.+.+++++....++|
T Consensus 163 ~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g 237 (249)
T PRK12825 163 LVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEARE----AK-DAETPLGRSGTPEDIARAVAFLCSDASDYITG 237 (249)
T ss_pred HHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHH----hh-hccCCCCCCcCHHHHHHHHHHHhCccccCcCC
Confidence 99999999999998899999999999999987654322111 11 11356777889999999999999887788999
Q ss_pred cEEEeCCCccc
Q 024752 250 QVICVDGGYSV 260 (263)
Q Consensus 250 ~~i~~dgG~~~ 260 (263)
+.++++||..+
T Consensus 238 ~~~~i~~g~~~ 248 (249)
T PRK12825 238 QVIEVTGGVDV 248 (249)
T ss_pred CEEEeCCCEee
Confidence 99999999765
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-36 Score=252.75 Aligned_cols=228 Identities=21% Similarity=0.255 Sum_probs=192.0
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
.+|+++||||+||||++++++|+++|++|++++|+++.++.+... .+.++.++.+|+++++++.++++.+.+.+ ++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~~~~-~~ 78 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL---HPDRALARLLDVTDFDAIDAVVADAEATF-GP 78 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh---cCCCeeEEEccCCCHHHHHHHHHHHHHHh-CC
Confidence 478999999999999999999999999999999998776555432 23467888999999999999999999888 78
Q ss_pred ccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHH
Q 024752 92 LNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMN 171 (263)
Q Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~ 171 (263)
+|++|||||....++..+.+.++|++.+++|+.++++++++++|+|++++.++||++||..+..+.++...|+++|++++
T Consensus 79 ~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~~ 158 (277)
T PRK06180 79 IDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALE 158 (277)
T ss_pred CCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHHHHHHH
Confidence 99999999998777788889999999999999999999999999999887889999999999999899999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEEecCcccCCcccccccc-----chhHH---HHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 172 QLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKD-----SNFLE---HANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 172 ~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-----~~~~~---~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
.++++++.|+.+.|+++++|+||+++|++....... ..... .........+..++.+|+|+++++.+++...
T Consensus 159 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~ 238 (277)
T PRK06180 159 GISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQAILAAVESD 238 (277)
T ss_pred HHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999875432111 11111 1111112234556788999999999887654
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-38 Score=244.58 Aligned_cols=237 Identities=27% Similarity=0.391 Sum_probs=195.4
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc--CCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
|+++||++++||+.||||++++++|+++|..+.++..+.+..+..+ ++++. ...+.+++||+++..+++++++++.+
T Consensus 1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~a-kL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~ 79 (261)
T KOG4169|consen 1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIA-KLQAINPSVSVIFIKCDVTNRGDLEAAFDKILA 79 (261)
T ss_pred CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHH-HHhccCCCceEEEEEeccccHHHHHHHHHHHHH
Confidence 6889999999999999999999999999999888888877755443 44432 45699999999999999999999999
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC---CceEEEEccccccccCCCCcch
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG---NGNIIFISSVAGVIAIPMCSIY 163 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~iv~vsS~~~~~~~~~~~~Y 163 (263)
+| +.+|++||+||+. ++.+|++.+++|+.|..+-....+|+|.+++ +|-||++||..+..+.|..+.|
T Consensus 80 ~f-g~iDIlINgAGi~--------~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY 150 (261)
T KOG4169|consen 80 TF-GTIDILINGAGIL--------DDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVY 150 (261)
T ss_pred Hh-CceEEEEcccccc--------cchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhh
Confidence 99 8999999999986 4566999999999999999999999999864 5789999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHH--ccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcC
Q 024752 164 ASSKVAMNQLTKNLACEW--AKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCL 241 (263)
Q Consensus 164 ~~sK~a~~~~~~~~a~e~--~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s 241 (263)
++||+++.+|+||++.+. .+.||+++++|||++.|.+...+.....+.+..+...+........+|.+++..++-...
T Consensus 151 ~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~~q~~~~~a~~~v~aiE 230 (261)
T KOG4169|consen 151 AASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERAPKQSPACCAINIVNAIE 230 (261)
T ss_pred hhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHcccCCHHHHHHHHHHHHh
Confidence 999999999999998865 467999999999999999987764322211111112111122224568888888776654
Q ss_pred CCCCCccCcEEEeCCCc
Q 024752 242 SATSYVTGQVICVDGGY 258 (263)
Q Consensus 242 ~~~~~~~G~~i~~dgG~ 258 (263)
. ..+|+.+.+|.|.
T Consensus 231 ~---~~NGaiw~v~~g~ 244 (261)
T KOG4169|consen 231 Y---PKNGAIWKVDSGS 244 (261)
T ss_pred h---ccCCcEEEEecCc
Confidence 3 4689999999986
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=260.36 Aligned_cols=213 Identities=25% Similarity=0.313 Sum_probs=176.8
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc--CCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
..|++++||||++|||+++|++|+++|++|++++|++++++++.+++... +.++..+.+|+++ ++.+.++++.+.+
T Consensus 51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~ 128 (320)
T PLN02780 51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETI 128 (320)
T ss_pred ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHh
Confidence 36899999999999999999999999999999999999999998888754 3467888999985 2333444444443
Q ss_pred C-CCccEEEeCCCCCCC--CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccc--cCCCCcch
Q 024752 89 D-GKLNILINNAGTFIP--KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVI--AIPMCSIY 163 (263)
Q Consensus 89 ~-~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~--~~~~~~~Y 163 (263)
+ .++|++|||||+... .++.+.+.+++++.+++|+.|++.++++++|.|.+++.|+||++||.++.. +.|....|
T Consensus 129 ~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y 208 (320)
T PLN02780 129 EGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVY 208 (320)
T ss_pred cCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHH
Confidence 1 257799999998753 457788999999999999999999999999999988889999999998864 35778999
Q ss_pred hhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcC
Q 024752 164 ASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCL 241 (263)
Q Consensus 164 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s 241 (263)
++||+++++|+++++.|++++||+|++|+||+|+|++..... . .. ...+|+++|+.++.-..
T Consensus 209 ~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~~--~-------------~~-~~~~p~~~A~~~~~~~~ 270 (320)
T PLN02780 209 AATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIRR--S-------------SF-LVPSSDGYARAALRWVG 270 (320)
T ss_pred HHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccccC--C-------------CC-CCCCHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999865210 0 00 12478999998876654
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-36 Score=247.69 Aligned_cols=232 Identities=26% Similarity=0.324 Sum_probs=202.3
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcC-CceEEEeccCC--CHHHHHHHHHHHHh
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG-LQVSGSVCDLK--IRAQREKLMETVSS 86 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~--~~~~~~~~~~~~~~ 86 (263)
-+++|+++|||++++||.+++++|+++|++|++++|+.+..++..+++...+ .++.++.+|++ +++++.++++.+.+
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE 88 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence 3689999999999999999999999999999999999988888877776543 35667777875 78999999999998
Q ss_pred hcCCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhh
Q 024752 87 QFDGKLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYAS 165 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~ 165 (263)
.+ +++|++|||||.... .++.+.+.+.|++.+++|+.++++++++++|.|.+++.++||++||..+..+.++...|++
T Consensus 89 ~~-~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~ 167 (247)
T PRK08945 89 QF-GRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAV 167 (247)
T ss_pred Hh-CCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCcccHH
Confidence 88 799999999998644 4566788999999999999999999999999999888899999999999888889999999
Q ss_pred HHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCC
Q 024752 166 SKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245 (263)
Q Consensus 166 sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~ 245 (263)
+|++++.++++++.++...||++++++||++.|++........ +..++.+|+|+++.+.+++++...
T Consensus 168 sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~ 234 (247)
T PRK08945 168 SKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFPGE-------------DPQKLKTPEDIMPLYLYLMGDDSR 234 (247)
T ss_pred HHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcCcc-------------cccCCCCHHHHHHHHHHHhCcccc
Confidence 9999999999999999999999999999999998753322111 123467899999999999999999
Q ss_pred CccCcEEEeC
Q 024752 246 YVTGQVICVD 255 (263)
Q Consensus 246 ~~~G~~i~~d 255 (263)
+++|+.+...
T Consensus 235 ~~~g~~~~~~ 244 (247)
T PRK08945 235 RKNGQSFDAQ 244 (247)
T ss_pred ccCCeEEeCC
Confidence 9999987543
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-36 Score=253.72 Aligned_cols=225 Identities=21% Similarity=0.263 Sum_probs=187.6
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
+|+++||||++|||++++++|+++|++|++++|+.+.++++.+ . .+.++.+|++++++++++++++.+.+++++
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~----~--~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~i 77 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA----E--GLEAFQLDYAEPESIAALVAQVLELSGGRL 77 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----C--CceEEEccCCCHHHHHHHHHHHHHHcCCCc
Confidence 6899999999999999999999999999999999877655432 1 367789999999999999999987765789
Q ss_pred cEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHHH
Q 024752 93 NILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQ 172 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~ 172 (263)
|++|||||+...+++.+.+.+++++.+++|+.|++.+++.++|.|++++.++||++||..+..+.++...|++||+++++
T Consensus 78 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~ 157 (277)
T PRK05993 78 DALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEG 157 (277)
T ss_pred cEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHHHHHHH
Confidence 99999999988888888999999999999999999999999999998888999999999999888899999999999999
Q ss_pred HHHHHHHHHccCCcEEEEEecCcccCCcccccccc--------c-----hhHHHHHHhHh-cCCCCCCCChhhHHHHHHH
Q 024752 173 LTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKD--------S-----NFLEHANRMVL-RTPMLRPGEPNEVSSVVAF 238 (263)
Q Consensus 173 ~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--------~-----~~~~~~~~~~~-~~~~~~~~~~~~va~~~~~ 238 (263)
++++++.|+.++||+|++|+||+++|++....... . ...+....... ..+.....+|+++++.++.
T Consensus 158 ~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~~ 237 (277)
T PRK05993 158 LSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLGPEAVYAVLLH 237 (277)
T ss_pred HHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCCHHHHHHHHHH
Confidence 99999999999999999999999999987543211 0 00000011111 1122234679999999987
Q ss_pred HcCCC
Q 024752 239 LCLSA 243 (263)
Q Consensus 239 l~s~~ 243 (263)
.+...
T Consensus 238 a~~~~ 242 (277)
T PRK05993 238 ALTAP 242 (277)
T ss_pred HHcCC
Confidence 76543
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-36 Score=246.77 Aligned_cols=229 Identities=27% Similarity=0.412 Sum_probs=193.1
Q ss_pred EEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCccEEE
Q 024752 17 LVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILI 96 (263)
Q Consensus 17 lVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~li 96 (263)
+||||++|||++++++|+++|++|++++|+.+..++...+++. +.++.++.+|+++++++.++++++ +++|++|
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~-----~~id~li 74 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG-GAPVRTAALDITDEAAVDAFFAEA-----GPFDHVV 74 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCceEEEEccCCCHHHHHHHHHhc-----CCCCEEE
Confidence 6999999999999999999999999999998887777666642 556888999999999999988753 6899999
Q ss_pred eCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHHHHHHH
Q 024752 97 NNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKN 176 (263)
Q Consensus 97 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~~~~ 176 (263)
||+|.....++.+.+.+++++++++|+.+++++++ .+.+. +.++||++||..+..+.++...|+++|+++++++++
T Consensus 75 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~--~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~ 150 (230)
T PRK07041 75 ITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIA--PGGSLTFVSGFAAVRPSASGVLQGAINAALEALARG 150 (230)
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhc--CCeEEEEECchhhcCCCCcchHHHHHHHHHHHHHHH
Confidence 99999877777788999999999999999999999 44443 468999999999998888899999999999999999
Q ss_pred HHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCC
Q 024752 177 LACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDG 256 (263)
Q Consensus 177 ~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dg 256 (263)
++.|+.+ |++++++||+++|++........ ............|.++..+|+|+++++.+|+++ .+++|+.+.+||
T Consensus 151 la~e~~~--irv~~i~pg~~~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~--~~~~G~~~~v~g 225 (230)
T PRK07041 151 LALELAP--VRVNTVSPGLVDTPLWSKLAGDA-REAMFAAAAERLPARRVGQPEDVANAILFLAAN--GFTTGSTVLVDG 225 (230)
T ss_pred HHHHhhC--ceEEEEeecccccHHHHhhhccc-hHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcC--CCcCCcEEEeCC
Confidence 9999975 99999999999999865332111 111122334456777888999999999999974 579999999999
Q ss_pred Cccc
Q 024752 257 GYSV 260 (263)
Q Consensus 257 G~~~ 260 (263)
|..+
T Consensus 226 g~~~ 229 (230)
T PRK07041 226 GHAI 229 (230)
T ss_pred Ceec
Confidence 9865
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-36 Score=279.67 Aligned_cols=249 Identities=30% Similarity=0.396 Sum_probs=217.0
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
.++||+++||||+||||+++++.|+++|++|++++|+.+.++...+++... .++.++.+|+++++++.++++++.+.+
T Consensus 419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~~~~~- 496 (681)
T PRK08324 419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP-DRALGVACDVTDEAAVQAAFEEAALAF- 496 (681)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc-CcEEEEEecCCCHHHHHHHHHHHHHHc-
Confidence 468999999999999999999999999999999999998888777776544 568899999999999999999999888
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCC-ceEEEEccccccccCCCCcchhhHHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGN-GNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+++|++|||||.....++.+.+.++|++.+++|+.+++.+++++.+.|++++. ++||++||..+..+.++...|+++|+
T Consensus 497 g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~asKa 576 (681)
T PRK08324 497 GGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKA 576 (681)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHHHHH
Confidence 78999999999988888888999999999999999999999999999988764 89999999999988889999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcc--cCCccccccccc-------hhHHHHHHhHhcCCCCCCCChhhHHHHHHHH
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVI--RTPLLDTVEKDS-------NFLEHANRMVLRTPMLRPGEPNEVSSVVAFL 239 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v--~t~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l 239 (263)
+++.++++++.++.+.||++|.|+||.+ .|++........ ...+....+....+++++..++|++++++++
T Consensus 577 a~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~l 656 (681)
T PRK08324 577 AELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVVFL 656 (681)
T ss_pred HHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHHHHH
Confidence 9999999999999999999999999999 787654321100 0011112344566788899999999999999
Q ss_pred cCCCCCCccCcEEEeCCCccc
Q 024752 240 CLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 240 ~s~~~~~~~G~~i~~dgG~~~ 260 (263)
+++...+.+|+.+++|||...
T Consensus 657 ~s~~~~~~tG~~i~vdgG~~~ 677 (681)
T PRK08324 657 ASGLLSKTTGAIITVDGGNAA 677 (681)
T ss_pred hCccccCCcCCEEEECCCchh
Confidence 987778899999999999764
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-36 Score=249.72 Aligned_cols=214 Identities=25% Similarity=0.283 Sum_probs=185.8
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
+|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+ ++.++.+|+++++++.++++++.+++ +++
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~-g~i 79 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAA-RVSVYAADVRDADALAAAAADFIAAH-GLP 79 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCC-eeEEEEcCCCCHHHHHHHHHHHHHhC-CCC
Confidence 4799999999999999999999999999999999988877766664433 78899999999999999999999888 789
Q ss_pred cEEEeCCCCCCCCCC-CCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHH
Q 024752 93 NILINNAGTFIPKET-TEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMN 171 (263)
Q Consensus 93 d~li~~ag~~~~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~ 171 (263)
|++|||||....... .+.+.+++++++++|+.|++++++.++|.|++++.++||++||..+..+.+....|++||++++
T Consensus 80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~ 159 (257)
T PRK07024 80 DVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAI 159 (257)
T ss_pred CEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHHHHH
Confidence 999999998654333 3378899999999999999999999999999888899999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 172 QLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 172 ~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
.++++++.|+.++||++++|+||+++|++..... .+.....+|+++++.++..+...
T Consensus 160 ~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~---------------~~~~~~~~~~~~a~~~~~~l~~~ 216 (257)
T PRK07024 160 KYLESLRVELRPAGVRVVTIAPGYIRTPMTAHNP---------------YPMPFLMDADRFAARAARAIARG 216 (257)
T ss_pred HHHHHHHHHhhccCcEEEEEecCCCcCchhhcCC---------------CCCCCccCHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999754321 11122357999999988777544
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=250.66 Aligned_cols=245 Identities=22% Similarity=0.294 Sum_probs=203.9
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc--CCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
+++|+++||||+|+||+++++.|+++|++|++++|+.+..++..+++... +.++.++.+|++|++++++ ++++.+.+
T Consensus 1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~ 79 (280)
T PRK06914 1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI 79 (280)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc
Confidence 46799999999999999999999999999999999998887777666543 3468889999999999999 88888887
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+++|++|||||....+...+.+.+++++.+++|+.+++.++++++|.|++.+.++||++||..+..+.++...|+++|+
T Consensus 80 -~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 158 (280)
T PRK06914 80 -GRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKY 158 (280)
T ss_pred -CCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHHhHH
Confidence 7999999999988777777889999999999999999999999999998887889999999999888889999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccc--------cchhHHHHHHhHh--cCCCCCCCChhhHHHHHHH
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEK--------DSNFLEHANRMVL--RTPMLRPGEPNEVSSVVAF 238 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~--------~~~~~~~~~~~~~--~~~~~~~~~~~~va~~~~~ 238 (263)
+++.++++++.|+.++||+++.++||+++|++...... ............. ..+..++.+|+|+++++++
T Consensus 159 ~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 238 (280)
T PRK06914 159 ALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPIDVANLIVE 238 (280)
T ss_pred HHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHHHHHHHHHH
Confidence 99999999999999999999999999999997643211 0111111111111 1245667899999999999
Q ss_pred HcCCCCCCccCcEEEeCCCccc
Q 024752 239 LCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 239 l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
++++... +..+++++|+.+
T Consensus 239 ~~~~~~~---~~~~~~~~~~~~ 257 (280)
T PRK06914 239 IAESKRP---KLRYPIGKGVKL 257 (280)
T ss_pred HHcCCCC---CcccccCCchHH
Confidence 9986654 246777776654
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=250.81 Aligned_cols=232 Identities=25% Similarity=0.335 Sum_probs=194.1
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++++++++++++.+.+.+
T Consensus 3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~- 81 (287)
T PRK06194 3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERF- 81 (287)
T ss_pred CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence 4678999999999999999999999999999999999888888888877666678889999999999999999999988
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCC------ceEEEEccccccccCCCCcch
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGN------GNIIFISSVAGVIAIPMCSIY 163 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~------~~iv~vsS~~~~~~~~~~~~Y 163 (263)
+++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.++.. ++||++||..+..+.++...|
T Consensus 82 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y 161 (287)
T PRK06194 82 GAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIY 161 (287)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcch
Confidence 89999999999988777788899999999999999999999999999987654 799999999999888889999
Q ss_pred hhHHHHHHHHHHHHHHHHcc--CCcEEEEEecCcccCCccccccccc-----------hhHHHHHHhHhcCCCCCCCChh
Q 024752 164 ASSKVAMNQLTKNLACEWAK--DKIRVNTVAPWVIRTPLLDTVEKDS-----------NFLEHANRMVLRTPMLRPGEPN 230 (263)
Q Consensus 164 ~~sK~a~~~~~~~~a~e~~~--~gi~v~~v~PG~v~t~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~ 230 (263)
+++|++++.++++++.|+.. .+|++++++||+++|++.......+ ++.. ..............+++
T Consensus 162 ~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~ 240 (287)
T PRK06194 162 NVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLI-AQAMSQKAVGSGKVTAE 240 (287)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhH-HHHHHHhhhhccCCCHH
Confidence 99999999999999999874 5799999999999999865432110 0000 01111111111236899
Q ss_pred hHHHHHHHHcCCC
Q 024752 231 EVSSVVAFLCLSA 243 (263)
Q Consensus 231 ~va~~~~~l~s~~ 243 (263)
|+|+.+..++...
T Consensus 241 dva~~i~~~~~~~ 253 (287)
T PRK06194 241 EVAQLVFDAIRAG 253 (287)
T ss_pred HHHHHHHHHHHcC
Confidence 9999998876533
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-35 Score=246.93 Aligned_cols=235 Identities=18% Similarity=0.226 Sum_probs=197.5
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
..++++.|+++||||+++||++++++|+++|++|++++|+.+..++...++...+.++.++.+|+++++++.++++++.+
T Consensus 4 ~~~~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 83 (274)
T PRK07775 4 FEPHPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEE 83 (274)
T ss_pred CCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 34467889999999999999999999999999999999998877777666666566788899999999999999999988
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhH
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASS 166 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s 166 (263)
.+ +++|++|||||.....+..+.+.+.+++.+++|+.++++++++++|.|.+++.++||++||..+..+.++...|+++
T Consensus 84 ~~-~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s 162 (274)
T PRK07775 84 AL-GEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAA 162 (274)
T ss_pred hc-CCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHHHH
Confidence 87 78999999999877767777889999999999999999999999999988778899999999988888888899999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhH--hcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMV--LRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
|++++.++++++.++.+.||++++|+||+++|++........ ......... ......++..++|++++++++++..
T Consensus 163 K~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~ 240 (274)
T PRK07775 163 KAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEV-IGPMLEDWAKWGQARHDYFLRASDLARAITFVAETP 240 (274)
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhh-hhHHHHHHHHhcccccccccCHHHHHHHHHHHhcCC
Confidence 999999999999999988999999999999998754322111 110001111 1122355789999999999998753
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=247.84 Aligned_cols=222 Identities=27% Similarity=0.335 Sum_probs=193.8
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
|++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++ ..+.++.++.+|+++++++.++++.+.+ +
T Consensus 1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~ 78 (263)
T PRK09072 1 MDLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-PYPGRHRWVVADLTSEAGREAVLARARE-M 78 (263)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHHHh-c
Confidence 5678999999999999999999999999999999999998888887777 3456788999999999999999999876 5
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+++|++|||||.....++.+.+.+++++.+++|+.|++++++.++|+|.+++.+++|++||..+..+.++...|+++|+
T Consensus 79 -~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~ 157 (263)
T PRK09072 79 -GGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKF 157 (263)
T ss_pred -CCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHHHHH
Confidence 7899999999988777778889999999999999999999999999998887799999999999888888999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
++..++++++.|+.++||+|+.++||+++|++....... .. .....+..+|+|+++.+++++...
T Consensus 158 a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~---------~~-~~~~~~~~~~~~va~~i~~~~~~~ 222 (263)
T PRK09072 158 ALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQA---------LN-RALGNAMDDPEDVAAAVLQAIEKE 222 (263)
T ss_pred HHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhccc---------cc-ccccCCCCCHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999999875432110 00 011124568999999999988754
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-36 Score=246.61 Aligned_cols=220 Identities=27% Similarity=0.311 Sum_probs=183.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC--CeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
|+++||||++|||++++++|+++| +.|++..|+.... ..+.++.++++|++++++++++.+ ++ ++
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~--------~~~~~~~~~~~Dls~~~~~~~~~~----~~-~~ 67 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD--------FQHDNVQWHALDVTDEAEIKQLSE----QF-TQ 67 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc--------cccCceEEEEecCCCHHHHHHHHH----hc-CC
Confidence 579999999999999999999985 5677777765421 123467889999999999888543 34 78
Q ss_pred ccEEEeCCCCCCC------CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccc---cCCCCcc
Q 024752 92 LNILINNAGTFIP------KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVI---AIPMCSI 162 (263)
Q Consensus 92 id~li~~ag~~~~------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~---~~~~~~~ 162 (263)
+|++|||||.... .++.+.+.+.|++.+++|+.+++.+++.++|.|++++.++++++||..+.. +.+++..
T Consensus 68 id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~~ 147 (235)
T PRK09009 68 LDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYS 147 (235)
T ss_pred CCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcch
Confidence 9999999998753 345677889999999999999999999999999887778999999865533 3456678
Q ss_pred hhhHHHHHHHHHHHHHHHHcc--CCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHc
Q 024752 163 YASSKVAMNQLTKNLACEWAK--DKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC 240 (263)
Q Consensus 163 Y~~sK~a~~~~~~~~a~e~~~--~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~ 240 (263)
|+++|++++.|+++++.|+.+ .||+|++|+||+++|++..... ...|..++.+|+|+++.+.+++
T Consensus 148 Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~-------------~~~~~~~~~~~~~~a~~~~~l~ 214 (235)
T PRK09009 148 YRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQ-------------QNVPKGKLFTPEYVAQCLLGII 214 (235)
T ss_pred hhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchh-------------hccccCCCCCHHHHHHHHHHHH
Confidence 999999999999999999986 6999999999999999865321 1235566789999999999999
Q ss_pred CCCCCCccCcEEEeCCCcc
Q 024752 241 LSATSYVTGQVICVDGGYS 259 (263)
Q Consensus 241 s~~~~~~~G~~i~~dgG~~ 259 (263)
++..++++|+.+.+|||+.
T Consensus 215 ~~~~~~~~g~~~~~~g~~~ 233 (235)
T PRK09009 215 ANATPAQSGSFLAYDGETL 233 (235)
T ss_pred HcCChhhCCcEEeeCCcCC
Confidence 9988899999999999984
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-35 Score=242.44 Aligned_cols=244 Identities=31% Similarity=0.471 Sum_probs=202.6
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc-hhHHHHHHHHHhc-CCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE-TELNQRIQEWKSK-GLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
.+++|+++||||+++||++++++|+++|++|++++|+. +..+...+.+... +..+.++.+|+++++++.++++++.+.
T Consensus 3 ~~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 82 (249)
T PRK09135 3 TDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAA 82 (249)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 35679999999999999999999999999999999864 4455555555433 345788999999999999999999988
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+ +++|++|||||.....++.+.+.+++++.+++|+.+++++++++.|.+.++ .+.+++++|..+..+.++...|+.+|
T Consensus 83 ~-~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Y~~sK 160 (249)
T PRK09135 83 F-GRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ-RGAIVNITDIHAERPLKGYPVYCAAK 160 (249)
T ss_pred c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC-CeEEEEEeChhhcCCCCCchhHHHHH
Confidence 8 789999999998777677777889999999999999999999999998765 47888888877777778889999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
++++.++++++.++.+ ++++++++||+++|++....... ..........+....++++|+++++.+++.+ ..+.
T Consensus 161 ~~~~~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~-~~~~ 234 (249)
T PRK09135 161 AALEMLTRSLALELAP-EVRVNAVAPGAILWPEDGNSFDE----EARQAILARTPLKRIGTPEDIAEAVRFLLAD-ASFI 234 (249)
T ss_pred HHHHHHHHHHHHHHCC-CCeEEEEEeccccCccccccCCH----HHHHHHHhcCCcCCCcCHHHHHHHHHHHcCc-cccc
Confidence 9999999999999976 79999999999999985432111 1112333445667778899999999888875 4567
Q ss_pred cCcEEEeCCCcccc
Q 024752 248 TGQVICVDGGYSVT 261 (263)
Q Consensus 248 ~G~~i~~dgG~~~~ 261 (263)
+|+.+++++|..++
T Consensus 235 ~g~~~~i~~g~~~~ 248 (249)
T PRK09135 235 TGQILAVDGGRSLT 248 (249)
T ss_pred cCcEEEECCCeecc
Confidence 99999999998754
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-36 Score=248.27 Aligned_cols=236 Identities=26% Similarity=0.269 Sum_probs=191.6
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCch-hHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET-ELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
+++|+++||||+||||+++++.|+++|++|++++|+.. ..+....++...+.++.++.+|+++++++.++++++.+.+
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 82 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEF- 82 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC-
Confidence 67899999999999999999999999999999999764 4556666666556678889999999999999999998887
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccc-----ccCCCCcchh
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGV-----IAIPMCSIYA 164 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~-----~~~~~~~~Y~ 164 (263)
+++|++|||||...... .+++..+++|+.+++++++++.|.|.+ .+++|++||..+. .+.+.+..|+
T Consensus 83 ~~~d~vi~~ag~~~~~~------~~~~~~~~vn~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~~~~~~Y~ 154 (248)
T PRK07806 83 GGLDALVLNASGGMESG------MDEDYAMRLNRDAQRNLARAALPLMPA--GSRVVFVTSHQAHFIPTVKTMPEYEPVA 154 (248)
T ss_pred CCCcEEEECCCCCCCCC------CCcceeeEeeeHHHHHHHHHHHhhccC--CceEEEEeCchhhcCccccCCccccHHH
Confidence 78999999998643221 124678999999999999999999864 4799999996543 2334567899
Q ss_pred hHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCC
Q 024752 165 SSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244 (263)
Q Consensus 165 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~ 244 (263)
++|++++.++++++.|++++||+|++|+||++.|++......... ..... ....|.+++.+|+|+++++.++++ +
T Consensus 155 ~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~dva~~~~~l~~--~ 229 (248)
T PRK07806 155 RSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLN-PGAIE--ARREAAGKLYTVSEFAAEVARAVT--A 229 (248)
T ss_pred HHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCC-HHHHH--HHHhhhcccCCHHHHHHHHHHHhh--c
Confidence 999999999999999999999999999999999987644321111 11111 123577889999999999999997 4
Q ss_pred CCccCcEEEeCCCccc
Q 024752 245 SYVTGQVICVDGGYSV 260 (263)
Q Consensus 245 ~~~~G~~i~~dgG~~~ 260 (263)
.+++|+.++++||...
T Consensus 230 ~~~~g~~~~i~~~~~~ 245 (248)
T PRK07806 230 PVPSGHIEYVGGADYF 245 (248)
T ss_pred cccCccEEEecCccce
Confidence 5789999999999764
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-36 Score=254.95 Aligned_cols=242 Identities=23% Similarity=0.231 Sum_probs=192.1
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc--CCceEEEeccCCCHHHHHHHHHHHH
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
-.++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++... +.++.++.+|+++.++++++++++.
T Consensus 11 ~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~ 90 (306)
T PRK06197 11 IPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALR 90 (306)
T ss_pred cccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence 36789999999999999999999999999999999999998888777776542 4568889999999999999999999
Q ss_pred hhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccc----------
Q 024752 86 SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVI---------- 155 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~---------- 155 (263)
+.+ +++|++|||||+.... .+.+.++++..|++|+.|++.+++.++|.|++.+.++||++||..+..
T Consensus 91 ~~~-~~iD~li~nAg~~~~~--~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~ 167 (306)
T PRK06197 91 AAY-PRIDLLINNAGVMYTP--KQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQ 167 (306)
T ss_pred hhC-CCCCEEEECCccccCC--CccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccC
Confidence 888 7999999999986543 245678899999999999999999999999987778999999986543
Q ss_pred ---cCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEE--ecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChh
Q 024752 156 ---AIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTV--APWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPN 230 (263)
Q Consensus 156 ---~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v--~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (263)
+.++...|+.||++++.+++.++.++++.|++++++ +||+|+|++.+..... ........ .|. ...+++
T Consensus 168 ~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~~--~~~~~~~~---~~~-~~~~~~ 241 (306)
T PRK06197 168 WERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPRA--LRPVATVL---APL-LAQSPE 241 (306)
T ss_pred cccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcHH--HHHHHHHH---Hhh-hcCCHH
Confidence 223456899999999999999999999888877665 6999999987654321 11111111 121 123567
Q ss_pred hHHHHHHHHcCCCCCCccCcEEEeCCCcc
Q 024752 231 EVSSVVAFLCLSATSYVTGQVICVDGGYS 259 (263)
Q Consensus 231 ~va~~~~~l~s~~~~~~~G~~i~~dgG~~ 259 (263)
+.+...++++. .....+|+.+..||+..
T Consensus 242 ~g~~~~~~~~~-~~~~~~g~~~~~~~~~~ 269 (306)
T PRK06197 242 MGALPTLRAAT-DPAVRGGQYYGPDGFGE 269 (306)
T ss_pred HHHHHHHHHhc-CCCcCCCeEEccCcccc
Confidence 66666666655 34456899988887653
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-35 Score=242.79 Aligned_cols=243 Identities=40% Similarity=0.561 Sum_probs=202.3
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchh--HHHHHHHHHhcC-CceEEEeccCCC-HHHHHHHHHHH
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE--LNQRIQEWKSKG-LQVSGSVCDLKI-RAQREKLMETV 84 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~--~~~~~~~~~~~~-~~~~~~~~D~~~-~~~~~~~~~~~ 84 (263)
+++++|+++|||+++|||+++|+.|+++|++|+++.|+.+. .+...+.....+ ..+.+..+|+++ +++++.+++++
T Consensus 1 ~~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~ 80 (251)
T COG1028 1 MDLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAA 80 (251)
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHH
Confidence 46789999999999999999999999999998888887664 344443333222 357788899998 99999999999
Q ss_pred HhhcCCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCC-cc
Q 024752 85 SSQFDGKLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMC-SI 162 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~-~~ 162 (263)
.+.+ |++|++|||||+... .++.+.+.++|++.+++|+.+++.+++.+.|.++++ +||++||..+. ..++. ..
T Consensus 81 ~~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~Iv~isS~~~~-~~~~~~~~ 155 (251)
T COG1028 81 EEEF-GRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ---RIVNISSVAGL-GGPPGQAA 155 (251)
T ss_pred HHHc-CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC---eEEEECCchhc-CCCCCcch
Confidence 9998 889999999999887 488889999999999999999999999888888843 99999999999 77774 99
Q ss_pred hhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCC
Q 024752 163 YASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS 242 (263)
Q Consensus 163 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~ 242 (263)
|++||+|+++|+++++.|+.++||++++|+||++.|++........ ... ........+..+...|+++++.+.++.+.
T Consensus 156 Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (251)
T COG1028 156 YAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALESAE-LEA-LKRLAARIPLGRLGTPEEVAAAVAFLASD 233 (251)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhhhhh-hhH-HHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 9999999999999999999999999999999999999987654432 000 11111122555778899999999988876
Q ss_pred C-CCCccCcEEEeCCCc
Q 024752 243 A-TSYVTGQVICVDGGY 258 (263)
Q Consensus 243 ~-~~~~~G~~i~~dgG~ 258 (263)
. ..+++|+.+.+|||.
T Consensus 234 ~~~~~~~g~~~~~~~~~ 250 (251)
T COG1028 234 EAASYITGQTLPVDGGL 250 (251)
T ss_pred chhccccCCEEEeCCCC
Confidence 4 678999999999986
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=247.20 Aligned_cols=239 Identities=23% Similarity=0.248 Sum_probs=195.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc-hhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC-C
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE-TELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG-K 91 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~-~ 91 (263)
|+++||||++|||++++++|+++|++|++++|++ +.+++..+ ..+.++.++.+|++++++++++++++.+.++. .
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 78 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAE---QYNSNLTFHSLDLQDVHELETNFNEILSSIQEDN 78 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHh---ccCCceEEEEecCCCHHHHHHHHHHHHHhcCccc
Confidence 6899999999999999999999999999999987 33333222 23456888999999999999999998876521 2
Q ss_pred --ccEEEeCCCCCCC-CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-CCceEEEEccccccccCCCCcchhhHH
Q 024752 92 --LNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-GNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 92 --id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
.+++|+|||...+ .++.+.+.++|.+.+++|+.+++.+++.++|.|++. ..++||++||..+..+.++...|+++|
T Consensus 79 ~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK 158 (251)
T PRK06924 79 VSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSK 158 (251)
T ss_pred CCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHhHHH
Confidence 2389999998654 567788999999999999999999999999999874 357999999999988888999999999
Q ss_pred HHHHHHHHHHHHHHc--cCCcEEEEEecCcccCCcccccccc-chhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCC
Q 024752 168 VAMNQLTKNLACEWA--KDKIRVNTVAPWVIRTPLLDTVEKD-SNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~--~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~ 244 (263)
++++.++++++.|++ +.||+|++|.||+++|++....... .........+....+.+++.+|+|+++.+++++++.
T Consensus 159 aa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~- 237 (251)
T PRK06924 159 AGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGKLLSPEYVAKALRNLLETE- 237 (251)
T ss_pred HHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCCcCCHHHHHHHHHHHHhcc-
Confidence 999999999999985 4689999999999999986532111 111111123333446778899999999999999874
Q ss_pred CCccCcEEEeCC
Q 024752 245 SYVTGQVICVDG 256 (263)
Q Consensus 245 ~~~~G~~i~~dg 256 (263)
.+++|+.+.+|.
T Consensus 238 ~~~~G~~~~v~~ 249 (251)
T PRK06924 238 DFPNGEVIDIDE 249 (251)
T ss_pred cCCCCCEeehhh
Confidence 789999999885
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-35 Score=240.81 Aligned_cols=237 Identities=37% Similarity=0.547 Sum_probs=205.8
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEeeCCc-hhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCccE
Q 024752 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE-TELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNI 94 (263)
Q Consensus 16 vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 94 (263)
++|||++++||++++++|+++|++|++++|+. +..+...+++...+.++..+.+|++++++++++++.+.+.+ +++|+
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id~ 79 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEEL-GPIDI 79 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh-CCCCE
Confidence 58999999999999999999999999998875 45555666666666678899999999999999999998887 78999
Q ss_pred EEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHHHHH
Q 024752 95 LINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLT 174 (263)
Q Consensus 95 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~~ 174 (263)
+||++|.....+..+.+.+++++.+++|+.+++.+++.+.+.+.+.+.+++|++||..+..+.++...|+++|++++.++
T Consensus 80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~~ 159 (239)
T TIGR01830 80 LVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFT 159 (239)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHHHHHHHH
Confidence 99999987666666778899999999999999999999999998777789999999999888889999999999999999
Q ss_pred HHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCcEEEe
Q 024752 175 KNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVICV 254 (263)
Q Consensus 175 ~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~ 254 (263)
++++.++...|++++.++||+++|++..... .... ..+....+..++.+++|+++.+++++++...+.+|+.+++
T Consensus 160 ~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~ 234 (239)
T TIGR01830 160 KSLAKELASRNITVNAVAPGFIDTDMTDKLS--EKVK---KKILSQIPLGRFGTPEEVANAVAFLASDEASYITGQVIHV 234 (239)
T ss_pred HHHHHHHhhcCeEEEEEEECCCCChhhhhcC--hHHH---HHHHhcCCcCCCcCHHHHHHHHHHHhCcccCCcCCCEEEe
Confidence 9999999989999999999999998754322 1111 2233456777888999999999999988777899999999
Q ss_pred CCCc
Q 024752 255 DGGY 258 (263)
Q Consensus 255 dgG~ 258 (263)
|+|.
T Consensus 235 ~~g~ 238 (239)
T TIGR01830 235 DGGM 238 (239)
T ss_pred CCCc
Confidence 9985
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-35 Score=253.02 Aligned_cols=241 Identities=18% Similarity=0.165 Sum_probs=191.1
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCC-CeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
.+|+++||||++|||++++++|+++| ++|++++|+.++.++..+++...+.++..+.+|+++.++++++++++.+.+ +
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~ 80 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESG-R 80 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhC-C
Confidence 47899999999999999999999999 999999999988888877776555668888999999999999999998887 7
Q ss_pred CccEEEeCCCCCCC-CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC--CceEEEEcccccccc-----------
Q 024752 91 KLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG--NGNIIFISSVAGVIA----------- 156 (263)
Q Consensus 91 ~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~vsS~~~~~~----------- 156 (263)
++|++|||||+..+ .+..+.+.++|++.+++|+.+++++++.++|.|++++ .++||++||..+...
T Consensus 81 ~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~ 160 (314)
T TIGR01289 81 PLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKAN 160 (314)
T ss_pred CCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCccc
Confidence 89999999998643 2334578899999999999999999999999998764 489999999876421
Q ss_pred ----------------------CCCCcchhhHHHHHHHHHHHHHHHHc-cCCcEEEEEecCcc-cCCccccccccchhHH
Q 024752 157 ----------------------IPMCSIYASSKVAMNQLTKNLACEWA-KDKIRVNTVAPWVI-RTPLLDTVEKDSNFLE 212 (263)
Q Consensus 157 ----------------------~~~~~~Y~~sK~a~~~~~~~~a~e~~-~~gi~v~~v~PG~v-~t~~~~~~~~~~~~~~ 212 (263)
..+..+|++||+|+..+++.+++++. ++||+|++|+||+| .|++..........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~-- 238 (314)
T TIGR01289 161 LGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRT-- 238 (314)
T ss_pred ccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHH--
Confidence 12345699999999999999999995 46999999999999 69987543211100
Q ss_pred HHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCC
Q 024752 213 HANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDG 256 (263)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dg 256 (263)
............+.++++.++.+++++.+.....+|..+..++
T Consensus 239 -~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~ 281 (314)
T TIGR01289 239 -LFPPFQKYITKGYVSEEEAGERLAQVVSDPKLKKSGVYWSWGN 281 (314)
T ss_pred -HHHHHHHHHhccccchhhhhhhhHHhhcCcccCCCceeeecCC
Confidence 0000011112235679999999988777654445788776544
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-35 Score=241.81 Aligned_cols=232 Identities=22% Similarity=0.307 Sum_probs=192.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
++++||||++|||+++++.|+++|++|++++|+++.++.+.+++ +.++.++.+|+++++++.++++++.+.+ +++|
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~i~~~~~~~~~~~-~~id 76 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEW-RNID 76 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---ccceEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence 47999999999999999999999999999999988776665543 3468889999999999999999998887 7899
Q ss_pred EEEeCCCCCC-CCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHHH
Q 024752 94 ILINNAGTFI-PKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQ 172 (263)
Q Consensus 94 ~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~ 172 (263)
++|||||... ..++.+.+.++|++++++|+.+++.++++++|.|.+++.++||++||..+..+.++...|+++|++++.
T Consensus 77 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~ 156 (248)
T PRK10538 77 VLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQ 156 (248)
T ss_pred EEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHHHHHHHH
Confidence 9999999764 345667789999999999999999999999999998878899999999988888888999999999999
Q ss_pred HHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCcEE
Q 024752 173 LTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVI 252 (263)
Q Consensus 173 ~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i 252 (263)
+++.++.++.+.||++++|+||++.++............ ..... .....+.+|+|+|+++.++++....+.+++..
T Consensus 157 ~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~ 232 (248)
T PRK10538 157 FSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDG-KAEKT---YQNTVALTPEDVSEAVWWVATLPAHVNINTLE 232 (248)
T ss_pred HHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHH-HHHhh---ccccCCCCHHHHHHHHHHHhcCCCcccchhhc
Confidence 999999999999999999999999855543211111110 00111 11224568999999999999877777777654
Q ss_pred E
Q 024752 253 C 253 (263)
Q Consensus 253 ~ 253 (263)
.
T Consensus 233 ~ 233 (248)
T PRK10538 233 M 233 (248)
T ss_pred c
Confidence 3
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-35 Score=247.25 Aligned_cols=224 Identities=26% Similarity=0.321 Sum_probs=189.9
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
++|+++||||+||||++++++|+++|++|++++|+.+..+. ...+.++.+|++|+++++++++.+.+.+ ++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~~~~~~~-g~ 73 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP--------IPGVELLELDVTDDASVQAAVDEVIARA-GR 73 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc--------cCCCeeEEeecCCHHHHHHHHHHHHHhC-CC
Confidence 46899999999999999999999999999999998765432 1347788999999999999999999988 79
Q ss_pred ccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHH
Q 024752 92 LNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMN 171 (263)
Q Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~ 171 (263)
+|++|||||....+++.+.+.+++++.+++|+.+++.++++++|.|++++.++||++||..+..+.|....|+++|++++
T Consensus 74 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 153 (270)
T PRK06179 74 IDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVE 153 (270)
T ss_pred CCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHHHHHH
Confidence 99999999998878888889999999999999999999999999999988899999999999999889999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEEecCcccCCccccccccc-hh---HHHHHH--hHhcCCCCCCCChhhHHHHHHHHcCCCC
Q 024752 172 QLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDS-NF---LEHANR--MVLRTPMLRPGEPNEVSSVVAFLCLSAT 244 (263)
Q Consensus 172 ~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-~~---~~~~~~--~~~~~~~~~~~~~~~va~~~~~l~s~~~ 244 (263)
.++++++.|++++||+++.|+||+++|++........ .. ...... .....+..+..+|+++++.++.++....
T Consensus 154 ~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~~ 232 (270)
T PRK06179 154 GYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVVKAALGPW 232 (270)
T ss_pred HHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999999999875432211 10 000000 1111244566789999999999887543
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-35 Score=245.43 Aligned_cols=214 Identities=20% Similarity=0.217 Sum_probs=182.0
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCC-CeEEEeeCCchh-HHHHHHHHHhcCC-ceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETE-LNQRIQEWKSKGL-QVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g-~~V~~~~r~~~~-~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
++|+++||||++|||+++|++|+++| ++|++++|+.+. +++..+++...+. ++.++.+|+++++++.++++++.+ +
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~ 85 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-G 85 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-c
Confidence 47899999999999999999999995 899999999886 7888888776543 688999999999999999998876 4
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+++|++|||+|..........+.++..+.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|++||+
T Consensus 86 -g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~sKa 164 (253)
T PRK07904 86 -GDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGSTKA 164 (253)
T ss_pred -CCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHHHHH
Confidence 7899999999986442222224556678899999999999999999999988899999999988777788889999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
++.+|+++++.|+.++||+++.|+||+++|++...... .....+|+|+|+.++..+...
T Consensus 165 a~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~~----------------~~~~~~~~~~A~~i~~~~~~~ 223 (253)
T PRK07904 165 GLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAKE----------------APLTVDKEDVAKLAVTAVAKG 223 (253)
T ss_pred HHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCCC----------------CCCCCCHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999997653221 012357999999998877644
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=239.56 Aligned_cols=221 Identities=27% Similarity=0.352 Sum_probs=195.7
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
++++|+++|||++++||++++++|+++|++|++++|++++.++..+++...+.++.++.+|+++++++.++++++.+.+
T Consensus 4 ~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 82 (239)
T PRK07666 4 SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNEL- 82 (239)
T ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence 3678999999999999999999999999999999999988888888877666778899999999999999999998888
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
+++|++|||+|.....++.+.++++|++.+++|+.+++++++++.|.|.+++.+++|++||..+..+.++...|+.+|++
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 162 (239)
T PRK07666 83 GSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFG 162 (239)
T ss_pred CCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcchHHHHHH
Confidence 78999999999877677778899999999999999999999999999988878999999999999898888999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 170 MNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
++.++++++.|+.+.||+++.|+||++.|++........ . ......+++|+++.+..+++..
T Consensus 163 ~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~-----------~-~~~~~~~~~~~a~~~~~~l~~~ 224 (239)
T PRK07666 163 VLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGLTD-----------G-NPDKVMQPEDLAEFIVAQLKLN 224 (239)
T ss_pred HHHHHHHHHHHhhccCcEEEEEecCcccCcchhhccccc-----------c-CCCCCCCHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999999764332110 0 1124568999999999888654
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-35 Score=251.19 Aligned_cols=242 Identities=24% Similarity=0.256 Sum_probs=189.2
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc--CCceEEEeccCCCHHHHHHHHHHHH
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
..+++||+++||||++|||++++++|+++|++|++++|+.++.++..+++... +.++.++.+|+++.++++++++++.
T Consensus 9 ~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~ 88 (313)
T PRK05854 9 VPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLR 88 (313)
T ss_pred CcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHH
Confidence 45689999999999999999999999999999999999999988888887653 3468899999999999999999999
Q ss_pred hhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc---------
Q 024752 86 SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA--------- 156 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~--------- 156 (263)
+.+ +++|++|||||+... +..+.+.++|+..|++|+++++.+++.++|.|++. .++||++||..+..+
T Consensus 89 ~~~-~~iD~li~nAG~~~~-~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~~~~~~~ 165 (313)
T PRK05854 89 AEG-RPIHLLINNAGVMTP-PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAINWDDLNW 165 (313)
T ss_pred HhC-CCccEEEECCccccC-CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcCcccccc
Confidence 887 899999999998654 33356789999999999999999999999999865 589999999877543
Q ss_pred ---CCCCcchhhHHHHHHHHHHHHHHHH--ccCCcEEEEEecCcccCCccccccc---c-chhHHHHHHhHhcCCCCCCC
Q 024752 157 ---IPMCSIYASSKVAMNQLTKNLACEW--AKDKIRVNTVAPWVIRTPLLDTVEK---D-SNFLEHANRMVLRTPMLRPG 227 (263)
Q Consensus 157 ---~~~~~~Y~~sK~a~~~~~~~~a~e~--~~~gi~v~~v~PG~v~t~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~ 227 (263)
.++...|+.||+|+..|++.++.++ ...||+||+++||+++|++...... . ..+.....+...... ....
T Consensus 166 ~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 244 (313)
T PRK05854 166 ERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLSARG-FLVG 244 (313)
T ss_pred cccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHHhhcc-cccC
Confidence 2445689999999999999999865 4578999999999999998754211 0 111101111111011 1234
Q ss_pred ChhhHHHHHHHHcCCCCCCccCcEEEe
Q 024752 228 EPNEVSSVVAFLCLSATSYVTGQVICV 254 (263)
Q Consensus 228 ~~~~va~~~~~l~s~~~~~~~G~~i~~ 254 (263)
++++.+...++++.+... -+|..+.-
T Consensus 245 ~~~~ga~~~l~~a~~~~~-~~g~~~~~ 270 (313)
T PRK05854 245 TVESAILPALYAATSPDA-EGGAFYGP 270 (313)
T ss_pred CHHHHHHHhhheeeCCCC-CCCcEECC
Confidence 688888888887754322 24665543
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-34 Score=241.43 Aligned_cols=239 Identities=21% Similarity=0.300 Sum_probs=195.7
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
.|++|||||+|+||++++++|+++|++|++++|+++..++..++. +.++.++.+|+++.+++.++++++.+.+ +++
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i 77 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY---GDRLWVLQLDVTDSAAVRAVVDRAFAAL-GRI 77 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCceEEEEccCCCHHHHHHHHHHHHHHc-CCC
Confidence 478999999999999999999999999999999987766554432 3467889999999999999999988887 789
Q ss_pred cEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHHH
Q 024752 93 NILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQ 172 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~ 172 (263)
|+||||||.....+..+.+.+++++.+++|+.++++++++++|+|++++.++||++||..+..+.|+...|++||++++.
T Consensus 78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~ 157 (276)
T PRK06482 78 DVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEG 157 (276)
T ss_pred CEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHHHHHHHH
Confidence 99999999988777778889999999999999999999999999988878899999999988888889999999999999
Q ss_pred HHHHHHHHHccCCcEEEEEecCcccCCccccccccc-------hhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCC
Q 024752 173 LTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDS-------NFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245 (263)
Q Consensus 173 ~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~ 245 (263)
++++++.++.+.||+++.++||.+.|++........ ............-+...+.+++|++++++..+....
T Consensus 158 ~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~a~~~~~~~~~- 236 (276)
T PRK06482 158 FVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAIPGDPQKMVQAMIASADQTP- 236 (276)
T ss_pred HHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccCCCCCCHHHHHHHHHHHHcCCC-
Confidence 999999999999999999999999998764332111 001111111112223335789999999888775332
Q ss_pred CccCcEEEeCCCc
Q 024752 246 YVTGQVICVDGGY 258 (263)
Q Consensus 246 ~~~G~~i~~dgG~ 258 (263)
.+..+++.+|.
T Consensus 237 --~~~~~~~g~~~ 247 (276)
T PRK06482 237 --APRRLTLGSDA 247 (276)
T ss_pred --CCeEEecChHH
Confidence 25667777664
|
|
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=227.44 Aligned_cols=240 Identities=30% Similarity=0.419 Sum_probs=208.8
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
+.||-+.+|||+.+|+|++.+++|+++|+.|++.+-.+.+.++.++++ +.++.+.++|++.++++..++...+.+|
T Consensus 6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel---g~~~vf~padvtsekdv~aala~ak~kf- 81 (260)
T KOG1199|consen 6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL---GGKVVFTPADVTSEKDVRAALAKAKAKF- 81 (260)
T ss_pred hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh---CCceEEeccccCcHHHHHHHHHHHHhhc-
Confidence 357899999999999999999999999999999999999888888776 6789999999999999999999999999
Q ss_pred CCccEEEeCCCCCCCC------CCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC------CCceEEEEccccccccC
Q 024752 90 GKLNILINNAGTFIPK------ETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA------GNGNIIFISSVAGVIAI 157 (263)
Q Consensus 90 ~~id~li~~ag~~~~~------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~~~iv~vsS~~~~~~~ 157 (263)
|++|.++||||+.-.- .-...+.|+|++.+++|++|+|+.++...-.|-++ ++|.||+..|.+++.+-
T Consensus 82 grld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq 161 (260)
T KOG1199|consen 82 GRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQ 161 (260)
T ss_pred cceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCc
Confidence 9999999999987331 12346789999999999999999999999998754 35799999999999999
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHh-HhcCCC-CCCCChhhHHHH
Q 024752 158 PMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRM-VLRTPM-LRPGEPNEVSSV 235 (263)
Q Consensus 158 ~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~va~~ 235 (263)
.+..+|++||.++.+++--+++.++..|||+++|.||.++||+....++.- ..+ ....|. .+.+.|.|.+..
T Consensus 162 ~gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpekv------~~fla~~ipfpsrlg~p~eyahl 235 (260)
T KOG1199|consen 162 TGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPEKV------KSFLAQLIPFPSRLGHPHEYAHL 235 (260)
T ss_pred cchhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhHHH------HHHHHHhCCCchhcCChHHHHHH
Confidence 999999999999999999999999999999999999999999987665432 222 233453 467889999988
Q ss_pred HHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 236 VAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 236 ~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
+..+. +..+++|++|.+||...+.
T Consensus 236 vqaii--enp~lngevir~dgalrm~ 259 (260)
T KOG1199|consen 236 VQAII--ENPYLNGEVIRFDGALRMP 259 (260)
T ss_pred HHHHH--hCcccCCeEEEecceecCC
Confidence 76665 6779999999999988763
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=240.98 Aligned_cols=219 Identities=25% Similarity=0.309 Sum_probs=188.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
|+++||||++|||++++++|+++|++|++++|+.+..+++..++. +.++.++.+|+++++++.++++.+.+.+.+++|
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id 79 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG--AGNAWTGALDVTDRAAWDAALADFAAATGGRLD 79 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCC
Confidence 789999999999999999999999999999999988777766553 456889999999999999999988776337899
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHHHH
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQL 173 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~ 173 (263)
+||||||.....++.+.+.+++++.+++|+.+++.+++++.+.|++++.++||++||..+..+.++...|+.||++++.+
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~ 159 (260)
T PRK08267 80 VLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGL 159 (260)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHHHHHHH
Confidence 99999999877778888999999999999999999999999999988789999999999999988999999999999999
Q ss_pred HHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcC
Q 024752 174 TKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCL 241 (263)
Q Consensus 174 ~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s 241 (263)
+++++.++.++||++++|.||+++|++....... .. ..... ......+|+++++.+..++.
T Consensus 160 ~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~-~~----~~~~~--~~~~~~~~~~va~~~~~~~~ 220 (260)
T PRK08267 160 TEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNE-VD----AGSTK--RLGVRLTPEDVAEAVWAAVQ 220 (260)
T ss_pred HHHHHHHhcccCcEEEEEecCCcCCcccccccch-hh----hhhHh--hccCCCCHHHHHHHHHHHHh
Confidence 9999999999999999999999999987541110 00 00111 12234678999999998874
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-35 Score=238.91 Aligned_cols=193 Identities=24% Similarity=0.283 Sum_probs=177.0
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
..-+..+|.|+|||+.+|+|+.+|++|.+.|++|++.+-+++..+++..+.. ..+...++.|+|++++++++.+.+++
T Consensus 23 ~~~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~--s~rl~t~~LDVT~~esi~~a~~~V~~ 100 (322)
T KOG1610|consen 23 VLDSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK--SPRLRTLQLDVTKPESVKEAAQWVKK 100 (322)
T ss_pred cccccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc--CCcceeEeeccCCHHHHHHHHHHHHH
Confidence 3345778999999999999999999999999999999999998888887765 45677889999999999999999999
Q ss_pred hcC-CCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchh
Q 024752 87 QFD-GKLNILINNAGTFI-PKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYA 164 (263)
Q Consensus 87 ~~~-~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~ 164 (263)
... ..+-.||||||+.. .++.+..+.+++.+++++|++|++.++++++|++++. +||||++||+.+..+.|..++|+
T Consensus 101 ~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~a-rGRvVnvsS~~GR~~~p~~g~Y~ 179 (322)
T KOG1610|consen 101 HLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRA-RGRVVNVSSVLGRVALPALGPYC 179 (322)
T ss_pred hcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhc-cCeEEEecccccCccCcccccch
Confidence 862 34999999999774 4777888999999999999999999999999999886 59999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccc
Q 024752 165 SSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLD 202 (263)
Q Consensus 165 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~ 202 (263)
+||+|++.|+.++++|+.+.||+|..|.||.+.|++..
T Consensus 180 ~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~ 217 (322)
T KOG1610|consen 180 VSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN 217 (322)
T ss_pred hhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence 99999999999999999999999999999999999986
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-34 Score=237.46 Aligned_cols=213 Identities=24% Similarity=0.304 Sum_probs=188.1
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc--CCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
+|+++||||++|||++++++|+++|++|++++|++++.++..+++... +.++.++++|+++++++.++++++.+.+ +
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~ 80 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDEL-G 80 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence 689999999999999999999999999999999998888887776543 5578899999999999999999999988 8
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCC-CcchhhHHHH
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPM-CSIYASSKVA 169 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~-~~~Y~~sK~a 169 (263)
++|++|||||+....++.+.+.+.+++.+++|+.+++.++++++|.|++.+.++||++||..+..+.+. ...|+.||++
T Consensus 81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a 160 (248)
T PRK08251 81 GLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKAG 160 (248)
T ss_pred CCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHHHHHHH
Confidence 999999999998777777788999999999999999999999999998877889999999988888775 6889999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCC
Q 024752 170 MNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS 242 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~ 242 (263)
++.++++++.++.+.||++++|+||+++|++...... .....+++++++.++..+..
T Consensus 161 ~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~----------------~~~~~~~~~~a~~i~~~~~~ 217 (248)
T PRK08251 161 VASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAKS----------------TPFMVDTETGVKALVKAIEK 217 (248)
T ss_pred HHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcccc----------------CCccCCHHHHHHHHHHHHhc
Confidence 9999999999999889999999999999998654321 11235689999988766653
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-34 Score=234.57 Aligned_cols=235 Identities=24% Similarity=0.340 Sum_probs=196.8
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
|++++|+++||||+++||.++++.|+++|++|++++|+.+..+...+++... .++.++.+|++++++++++++++.+.+
T Consensus 1 ~~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 79 (238)
T PRK05786 1 MRLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY-GNIHYVVGDVSSTESARNVIEKAAKVL 79 (238)
T ss_pred CCcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEECCCCCHHHHHHHHHHHHHHh
Confidence 4578999999999999999999999999999999999988877665665543 357889999999999999999988877
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccc-cCCCCcchhhHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVI-AIPMCSIYASSK 167 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-~~~~~~~Y~~sK 167 (263)
+++|.+|+++|.....++. +.+++++.+++|+.+++.+++.++|.|++ ++++|++||..+.. +.+....|+++|
T Consensus 80 -~~id~ii~~ag~~~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~~Y~~sK 154 (238)
T PRK05786 80 -NAIDGLVVTVGGYVEDTVE--EFSGLEEMLTNHIKIPLYAVNASLRFLKE--GSSIVLVSSMSGIYKASPDQLSYAVAK 154 (238)
T ss_pred -CCCCEEEEcCCCcCCCchH--HHHHHHHHHHHhchHHHHHHHHHHHHHhc--CCEEEEEecchhcccCCCCchHHHHHH
Confidence 7899999999976544333 34889999999999999999999999865 58999999987643 556678899999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCC-CCCCChhhHHHHHHHHcCCCCCC
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPM-LRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
++++.++++++.++.+.||+++.|+||+++|++.... .+ .. ..+. ....+++++++.+.+++++...+
T Consensus 155 ~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~----~~----~~---~~~~~~~~~~~~~va~~~~~~~~~~~~~ 223 (238)
T PRK05786 155 AGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPER----NW----KK---LRKLGDDMAPPEDFAKVIIWLLTDEADW 223 (238)
T ss_pred HHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchh----hh----hh---hccccCCCCCHHHHHHHHHHHhcccccC
Confidence 9999999999999999999999999999999864211 00 11 0111 23568999999999999988888
Q ss_pred ccCcEEEeCCCccc
Q 024752 247 VTGQVICVDGGYSV 260 (263)
Q Consensus 247 ~~G~~i~~dgG~~~ 260 (263)
++|+.+.+|||..+
T Consensus 224 ~~g~~~~~~~~~~~ 237 (238)
T PRK05786 224 VDGVVIPVDGGARL 237 (238)
T ss_pred ccCCEEEECCcccc
Confidence 99999999999765
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=231.39 Aligned_cols=199 Identities=27% Similarity=0.296 Sum_probs=172.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
++++|||+++|||+++++.|+++ ++|++++|+.. .+++|++++++++++++++ +++|
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~-----~~id 57 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------------DVQVDITDPASIRALFEKV-----GKVD 57 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------------ceEecCCChHHHHHHHHhc-----CCCC
Confidence 36999999999999999999999 99999999753 3579999999999988753 6899
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHHHH
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQL 173 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~ 173 (263)
++|||||.....++.+.+.++|++.+++|+.++++++++++|+|++ .++|+++||..+..+.++...|+++|+++++|
T Consensus 58 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~ 135 (199)
T PRK07578 58 AVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND--GGSFTLTSGILSDEPIPGGASAATVNGALEGF 135 (199)
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCeEEEEcccccCCCCCCchHHHHHHHHHHHH
Confidence 9999999877777788899999999999999999999999999975 48999999999988888999999999999999
Q ss_pred HHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCcEEE
Q 024752 174 TKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVIC 253 (263)
Q Consensus 174 ~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~ 253 (263)
+++++.|+ ++||++++|+||+++|++.... ...+.....+|+|+++.+..+++. ..+|+.++
T Consensus 136 ~~~la~e~-~~gi~v~~i~Pg~v~t~~~~~~--------------~~~~~~~~~~~~~~a~~~~~~~~~---~~~g~~~~ 197 (199)
T PRK07578 136 VKAAALEL-PRGIRINVVSPTVLTESLEKYG--------------PFFPGFEPVPAARVALAYVRSVEG---AQTGEVYK 197 (199)
T ss_pred HHHHHHHc-cCCeEEEEEcCCcccCchhhhh--------------hcCCCCCCCCHHHHHHHHHHHhcc---ceeeEEec
Confidence 99999999 8899999999999999863211 012334567899999999888763 57899987
Q ss_pred eC
Q 024752 254 VD 255 (263)
Q Consensus 254 ~d 255 (263)
+.
T Consensus 198 ~~ 199 (199)
T PRK07578 198 VG 199 (199)
T ss_pred cC
Confidence 63
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=243.79 Aligned_cols=240 Identities=17% Similarity=0.143 Sum_probs=187.8
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++...+.++.++.+|+++.+++.++++++.+.+
T Consensus 3 ~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~- 81 (322)
T PRK07453 3 QDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALG- 81 (322)
T ss_pred CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhC-
Confidence 4678999999999999999999999999999999999998888888775445578889999999999999999987765
Q ss_pred CCccEEEeCCCCCCCC-CCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCC--ceEEEEcccccccc----------
Q 024752 90 GKLNILINNAGTFIPK-ETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGN--GNIIFISSVAGVIA---------- 156 (263)
Q Consensus 90 ~~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~iv~vsS~~~~~~---------- 156 (263)
+++|+||||||+.... ...+.+.++|+..+++|+.|+++++++++|.|++.+. ++||++||.....+
T Consensus 82 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~ 161 (322)
T PRK07453 82 KPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPA 161 (322)
T ss_pred CCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCC
Confidence 7899999999986442 3345688999999999999999999999999987653 69999999754320
Q ss_pred -------------------------CCCCcchhhHHHHHHHHHHHHHHHHc-cCCcEEEEEecCcc-cCCccccccccch
Q 024752 157 -------------------------IPMCSIYASSKVAMNQLTKNLACEWA-KDKIRVNTVAPWVI-RTPLLDTVEKDSN 209 (263)
Q Consensus 157 -------------------------~~~~~~Y~~sK~a~~~~~~~~a~e~~-~~gi~v~~v~PG~v-~t~~~~~~~~~~~ 209 (263)
..+..+|+.||.+.+.+++.+++++. ..||++++++||+| .|++.+.....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~-- 239 (322)
T PRK07453 162 PADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRNTPPL-- 239 (322)
T ss_pred ccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcccccCCHH--
Confidence 11245799999999999999999995 46999999999999 58876543211
Q ss_pred hHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCcEEE
Q 024752 210 FLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVIC 253 (263)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~ 253 (263)
......+..........++++.++.+++++.+.....+|..+.
T Consensus 240 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~ 282 (322)
T PRK07453 240 -FQKLFPWFQKNITGGYVSQELAGERVAQVVADPEFAQSGVHWS 282 (322)
T ss_pred -HHHHHHHHHHHHhhceecHHHHhhHHHHhhcCcccCCCCceee
Confidence 1111111111112233567777777877776554456888776
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=236.54 Aligned_cols=223 Identities=29% Similarity=0.375 Sum_probs=192.8
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
+++++||||+++||+++++.|+++|++|++++|++...++..+++...+.++.++.+|++++++++++++++.+++ +++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i 79 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARF-GGI 79 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-CCC
Confidence 4789999999999999999999999999999999888888777777666778899999999999999999999888 789
Q ss_pred cEEEeCCCCCCCCCCCCC-CHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHH
Q 024752 93 NILINNAGTFIPKETTEF-TEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMN 171 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~ 171 (263)
|++|||||.....++.+. +.+++++.+++|+.+++.+++.+.|.|.++ .+++|++||..+..+.++...|+++|++++
T Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~ 158 (263)
T PRK06181 80 DILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-RGQIVVVSSLAGLTGVPTRSGYAASKHALH 158 (263)
T ss_pred CEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCEEEEEecccccCCCCCccHHHHHHHHHH
Confidence 999999998877777777 899999999999999999999999998765 489999999999888888899999999999
Q ss_pred HHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCC--CCCCCChhhHHHHHHHHcCCC
Q 024752 172 QLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTP--MLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 172 ~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~va~~~~~l~s~~ 243 (263)
.++++++.++.+.|++++++.||++.|++........... ....+ ...+.+|+|+++.+.+++...
T Consensus 159 ~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~------~~~~~~~~~~~~~~~dva~~i~~~~~~~ 226 (263)
T PRK06181 159 GFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGKP------LGKSPMQESKIMSAEECAEAILPAIARR 226 (263)
T ss_pred HHHHHHHHHhhhcCceEEEEecCccccCcchhhccccccc------cccccccccCCCCHHHHHHHHHHHhhCC
Confidence 9999999999999999999999999999875432111000 00111 235788999999999998743
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=222.06 Aligned_cols=186 Identities=30% Similarity=0.435 Sum_probs=171.5
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
|.+.|.++|||||++|||+++|++|.+.|.+|++++|+++++++..++. ..++...||+.|.++.+++++.+++.|
T Consensus 1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~----p~~~t~v~Dv~d~~~~~~lvewLkk~~ 76 (245)
T COG3967 1 MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN----PEIHTEVCDVADRDSRRELVEWLKKEY 76 (245)
T ss_pred CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC----cchheeeecccchhhHHHHHHHHHhhC
Confidence 5678999999999999999999999999999999999999988887664 447788999999999999999999999
Q ss_pred CCCccEEEeCCCCCCCCCCC--CCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhH
Q 024752 89 DGKLNILINNAGTFIPKETT--EFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASS 166 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~--~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s 166 (263)
..++++|||||+.....+. +-..++.++.+.+|++++.++++.++|++.+++.+.||+|||..+..+....+.|+++
T Consensus 77 -P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaT 155 (245)
T COG3967 77 -PNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCAT 155 (245)
T ss_pred -CchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhh
Confidence 8899999999998664443 3456778889999999999999999999999989999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCC
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTP 199 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~ 199 (263)
|+|+..|+.+|+..++..+|+|.-+.|-.|+|+
T Consensus 156 KAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 156 KAAIHSYTLALREQLKDTSVEVIELAPPLVDTT 188 (245)
T ss_pred HHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence 999999999999999999999999999999996
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-34 Score=221.37 Aligned_cols=225 Identities=25% Similarity=0.267 Sum_probs=184.2
Q ss_pred CCEEEEecCCCchHHHHHHHHHHC-CCe-EEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc-C
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAF-GAI-VHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF-D 89 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~-g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~ 89 (263)
-|.++||||++|||..++++|.+. |.. ++...|+++.+.+..+.....+.+++.++.|+++.+++.++++++.+-- .
T Consensus 3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~ 82 (249)
T KOG1611|consen 3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGS 82 (249)
T ss_pred CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhccc
Confidence 466999999999999999999976 555 4556677887644444444457889999999999999999999999873 2
Q ss_pred CCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCC-----------ceEEEEcccccccc-
Q 024752 90 GKLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGN-----------GNIIFISSVAGVIA- 156 (263)
Q Consensus 90 ~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-----------~~iv~vsS~~~~~~- 156 (263)
..+|+++||||+... ....+.+.+.|.+.+++|.+|+..+.|+++|++++... +.||++||.++..+
T Consensus 83 ~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~~ 162 (249)
T KOG1611|consen 83 DGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIGG 162 (249)
T ss_pred CCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccCC
Confidence 469999999999865 45566788999999999999999999999999987642 48999999877643
Q ss_pred --CCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHH
Q 024752 157 --IPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSS 234 (263)
Q Consensus 157 --~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~ 234 (263)
..+..+|.+||+|++.|+|+++.|+++.+|-|..+|||||.|+|..... ..++||-+.
T Consensus 163 ~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~~a--------------------~ltveeSts 222 (249)
T KOG1611|consen 163 FRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGKKA--------------------ALTVEESTS 222 (249)
T ss_pred CCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCCCc--------------------ccchhhhHH
Confidence 2346789999999999999999999999999999999999999986321 135677666
Q ss_pred HHHHHcCCCCCCccCcEEEeCCC
Q 024752 235 VVAFLCLSATSYVTGQVICVDGG 257 (263)
Q Consensus 235 ~~~~l~s~~~~~~~G~~i~~dgG 257 (263)
.++.....-....+|..++.|+-
T Consensus 223 ~l~~~i~kL~~~hnG~ffn~dlt 245 (249)
T KOG1611|consen 223 KLLASINKLKNEHNGGFFNRDGT 245 (249)
T ss_pred HHHHHHHhcCcccCcceEccCCC
Confidence 66665555556678999998874
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-33 Score=234.96 Aligned_cols=220 Identities=24% Similarity=0.319 Sum_probs=182.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
|+++||||++|||+++++.|+++|++|++++|+.+..++..+ . .+.++.+|++++++++++++++.+.+ +++|
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~----~--~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id 74 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA----A--GFTAVQLDVNDGAALARLAEELEAEH-GGLD 74 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----C--CCeEEEeeCCCHHHHHHHHHHHHHhc-CCCC
Confidence 789999999999999999999999999999999876654432 2 35678999999999999999998887 7899
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHHHH
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQL 173 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~ 173 (263)
++|||||....+++.+.+.+++++.+++|+.+++.++++++|.|++. .++||++||..+..+.+....|+++|++++.+
T Consensus 75 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~ 153 (274)
T PRK05693 75 VLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS-RGLVVNIGSVSGVLVTPFAGAYCASKAAVHAL 153 (274)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCEEEEECCccccCCCCCccHHHHHHHHHHHH
Confidence 99999998877778888999999999999999999999999999764 58999999999988888899999999999999
Q ss_pred HHHHHHHHccCCcEEEEEecCcccCCcccccccc--------chhHHHHHHhH--hcCCCCCCCChhhHHHHHHHHcC
Q 024752 174 TKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKD--------SNFLEHANRMV--LRTPMLRPGEPNEVSSVVAFLCL 241 (263)
Q Consensus 174 ~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--------~~~~~~~~~~~--~~~~~~~~~~~~~va~~~~~l~s 241 (263)
+++++.|++++||+|++|+||+++|++....... ..+........ .........+|+++++.++..+.
T Consensus 154 ~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~ 231 (274)
T PRK05693 154 SDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFARQLLAAVQ 231 (274)
T ss_pred HHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHh
Confidence 9999999999999999999999999987543211 11111001110 11112334579999999876654
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-33 Score=230.74 Aligned_cols=212 Identities=24% Similarity=0.284 Sum_probs=185.6
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc-CCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
.|+++||||++|||++++++|+++|++|++++|++++.++..+++... +.++.++++|++++++++++++++.+ +
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~----~ 76 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA----L 76 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh----c
Confidence 378999999999999999999999999999999998887777766543 45788999999999999999988753 4
Q ss_pred ccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHH
Q 024752 92 LNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMN 171 (263)
Q Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~ 171 (263)
+|++|||+|.....+..+.+.+++.+.+++|+.++++++++++|.|.+++.+++|++||..+..+.++...|+++|++++
T Consensus 77 ~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 156 (243)
T PRK07102 77 PDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALT 156 (243)
T ss_pred CCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHHHHHHH
Confidence 69999999987766777889999999999999999999999999999888899999999998888888899999999999
Q ss_pred HHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 172 QLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 172 ~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
+++++++.|+.+.||++++|+||+++|++..... .|.....+|+++++.+...++..
T Consensus 157 ~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~---------------~~~~~~~~~~~~a~~i~~~~~~~ 213 (243)
T PRK07102 157 AFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGLK---------------LPGPLTAQPEEVAKDIFRAIEKG 213 (243)
T ss_pred HHHHHHHHHhhccCcEEEEEecCcccChhhhccC---------------CCccccCCHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999998654321 12234567999999998887754
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-35 Score=224.82 Aligned_cols=185 Identities=25% Similarity=0.337 Sum_probs=169.6
Q ss_pred CCEEEEecCC-CchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 13 GMTALVTGGT-KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 13 ~k~vlVtGas-~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
.|+|+|||++ ||||.+++++|++.|+.|+++.|..+...++..+. .+....+|+++++++..+..++++...|+
T Consensus 7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~-----gl~~~kLDV~~~~~V~~v~~evr~~~~Gk 81 (289)
T KOG1209|consen 7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQF-----GLKPYKLDVSKPEEVVTVSGEVRANPDGK 81 (289)
T ss_pred CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhh-----CCeeEEeccCChHHHHHHHHHHhhCCCCc
Confidence 5889998887 69999999999999999999999998877776442 37788999999999999999999954489
Q ss_pred ccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHH
Q 024752 92 LNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMN 171 (263)
Q Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~ 171 (263)
+|+|+||||.....|..|.+.++.++.|++|++|+..+++++...+.+ .+|+||+++|..++.+.|..+.|++||+|+.
T Consensus 82 ld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lik-aKGtIVnvgSl~~~vpfpf~~iYsAsKAAih 160 (289)
T KOG1209|consen 82 LDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIK-AKGTIVNVGSLAGVVPFPFGSIYSASKAAIH 160 (289)
T ss_pred eEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHH-ccceEEEecceeEEeccchhhhhhHHHHHHH
Confidence 999999999999999999999999999999999999999999855555 4699999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEEecCcccCCcccc
Q 024752 172 QLTKNLACEWAKDKIRVNTVAPWVIRTPLLDT 203 (263)
Q Consensus 172 ~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~ 203 (263)
.+++.|+.|+++.||+|..+.||.|.|++.+.
T Consensus 161 ay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k 192 (289)
T KOG1209|consen 161 AYARTLRLELKPFGVRVINAITGGVATDIADK 192 (289)
T ss_pred HhhhhcEEeeeccccEEEEecccceecccccC
Confidence 99999999999999999999999999998755
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=263.67 Aligned_cols=219 Identities=26% Similarity=0.370 Sum_probs=191.6
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
-++++|+++||||++|||++++++|+++|++|++++|+++.++++.+++...+.++.++.+|+++.++++++++++.+.+
T Consensus 367 ~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 446 (657)
T PRK07201 367 GPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEH 446 (657)
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 36889999999999999999999999999999999999999988888887767789999999999999999999999998
Q ss_pred CCCccEEEeCCCCCCCCCCCCC--CHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhH
Q 024752 89 DGKLNILINNAGTFIPKETTEF--TEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASS 166 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s 166 (263)
+++|++|||||......+.+. +.+++++.+++|+.++++++++++|.|++++.++||++||..+..+.++...|+++
T Consensus 447 -g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s 525 (657)
T PRK07201 447 -GHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVAS 525 (657)
T ss_pred -CCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchHHHH
Confidence 789999999998755443322 36889999999999999999999999998888999999999999888889999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCC
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS 242 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~ 242 (263)
|+++++|+++++.|+.++||+|++|+||+|+|++....... ......+|+++|+.++..+..
T Consensus 526 K~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~~--------------~~~~~~~~~~~a~~i~~~~~~ 587 (657)
T PRK07201 526 KAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKRY--------------NNVPTISPEEAADMVVRAIVE 587 (657)
T ss_pred HHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCccccc--------------cCCCCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999986532110 112245789999988876543
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-34 Score=239.61 Aligned_cols=236 Identities=28% Similarity=0.360 Sum_probs=192.5
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHh--cCCceEEEeccCCCHHHHHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS--KGLQVSGSVCDLKIRAQREKLMET 83 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~ 83 (263)
...+++++++++|||+++|||+++|+.|+.+|++|++.+|+.+..++..+++.. ...++.++++|+++.+++.+++++
T Consensus 28 ~~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~ 107 (314)
T KOG1208|consen 28 THGIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEE 107 (314)
T ss_pred eccccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHH
Confidence 467789999999999999999999999999999999999999999999999885 355688899999999999999999
Q ss_pred HHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc-------
Q 024752 84 VSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA------- 156 (263)
Q Consensus 84 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~------- 156 (263)
+.+.+ +++|++|||||+..+.. ..+.|.++..|++|++|++.+++.++|.|++...+|||++||......
T Consensus 108 ~~~~~-~~ldvLInNAGV~~~~~--~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~ 184 (314)
T KOG1208|consen 108 FKKKE-GPLDVLINNAGVMAPPF--SLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLS 184 (314)
T ss_pred HHhcC-CCccEEEeCcccccCCc--ccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhcc
Confidence 99887 89999999999997765 567789999999999999999999999999887799999999875110
Q ss_pred ------CCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChh
Q 024752 157 ------IPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPN 230 (263)
Q Consensus 157 ------~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (263)
+.....|+.||.++..+++.|++.+.+ ||.+++++||.+.|+...+.. .+. ..+.........-+++
T Consensus 185 ~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r~~---~~~---~~l~~~l~~~~~ks~~ 257 (314)
T KOG1208|consen 185 GEKAKLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSRVN---LLL---RLLAKKLSWPLTKSPE 257 (314)
T ss_pred chhccCccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccceecch---HHH---HHHHHHHHHHhccCHH
Confidence 222335999999999999999999988 999999999999999444311 111 1111111111123688
Q ss_pred hHHHHHHHHcC-CCCCCccCcE
Q 024752 231 EVSSVVAFLCL-SATSYVTGQV 251 (263)
Q Consensus 231 ~va~~~~~l~s-~~~~~~~G~~ 251 (263)
.-|++.++.+. +.-...+|..
T Consensus 258 ~ga~t~~~~a~~p~~~~~sg~y 279 (314)
T KOG1208|consen 258 QGAATTCYAALSPELEGVSGKY 279 (314)
T ss_pred HHhhheehhccCccccCccccc
Confidence 88998887765 4444556655
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=232.53 Aligned_cols=226 Identities=22% Similarity=0.283 Sum_probs=184.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHH-HHhhcC--C
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMET-VSSQFD--G 90 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~~~~~~--~ 90 (263)
++++||||++|||++++++|+++|++|++++|+.... . ....+.++.++++|+++.+++++++++ +.+.++ +
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 76 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L---AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA 76 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h---hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence 4799999999999999999999999999999986542 1 122345688899999999999998877 555442 4
Q ss_pred CccEEEeCCCCCCC-CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHH
Q 024752 91 KLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 91 ~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
++|++|||||.... .++.+.+.++|++.+++|+.+++.+++.+.+.|.+++.++||++||..+..+.++...|+++|++
T Consensus 77 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a 156 (243)
T PRK07023 77 SRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKAA 156 (243)
T ss_pred CceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHHHHHHH
Confidence 79999999998765 56677889999999999999999999999999988778999999999999898899999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccc-hhHHHHHHhHhcCCCCCCCChhhHHH-HHHHHcCCCCC
Q 024752 170 MNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDS-NFLEHANRMVLRTPMLRPGEPNEVSS-VVAFLCLSATS 245 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~va~-~~~~l~s~~~~ 245 (263)
++++++.++.+ .+.||+++.|+||+++|++........ ........+....|.++..+|+|+++ .+.+|.++.-.
T Consensus 157 ~~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~~~~ 233 (243)
T PRK07023 157 LDHHARAVALD-ANRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKASGALSTPEDAARRLIAYLLSDDFG 233 (243)
T ss_pred HHHHHHHHHhc-CCCCcEEEEecCCccccHHHHHHHhcccccchHHHHHHHhhhcCCCCCHHHHHHHHHHHHhccccC
Confidence 99999999999 778999999999999999865432111 00111123334557788899999999 56678776543
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-33 Score=227.43 Aligned_cols=225 Identities=29% Similarity=0.411 Sum_probs=193.8
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
.+.+++++||||+|+||++++++|+++|++|++++|+++..++..+++... .++.++.+|+++++++.++++++.+.+
T Consensus 3 ~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~- 80 (237)
T PRK07326 3 SLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK-GNVLGLAADVRDEADVQRAVDAIVAAF- 80 (237)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc-CcEEEEEccCCCHHHHHHHHHHHHHHc-
Confidence 467899999999999999999999999999999999998888777777544 568889999999999999999998887
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
+++|++||++|.....++.+.+.+++++.+++|+.+++.+++++++.| +++.++||++||..+..+.++...|+++|++
T Consensus 81 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a 159 (237)
T PRK07326 81 GGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPAL-KRGGGYIINISSLAGTNFFAGGAAYNASKFG 159 (237)
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHH-HHCCeEEEEECChhhccCCCCCchHHHHHHH
Confidence 789999999998877777788999999999999999999999999998 4446899999999888888888899999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccC
Q 024752 170 MNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTG 249 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G 249 (263)
++.+++.++.|+.+.|++++.|+||++.|++........ .....+++|+++.+.+++......+.+
T Consensus 160 ~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~--------------~~~~~~~~d~a~~~~~~l~~~~~~~~~ 225 (237)
T PRK07326 160 LVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPSEK--------------DAWKIQPEDIAQLVLDLLKMPPRTLPS 225 (237)
T ss_pred HHHHHHHHHHHhcccCcEEEEEeeccccCcccccccchh--------------hhccCCHHHHHHHHHHHHhCCcccccc
Confidence 999999999999999999999999999998754322110 011257999999999998876654544
Q ss_pred cE
Q 024752 250 QV 251 (263)
Q Consensus 250 ~~ 251 (263)
+.
T Consensus 226 ~~ 227 (237)
T PRK07326 226 KI 227 (237)
T ss_pred ce
Confidence 43
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-32 Score=226.38 Aligned_cols=204 Identities=21% Similarity=0.251 Sum_probs=171.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
++++||||++|||++++++|+++|++|++++|+++.++++.++ ..++.++++|++++++++++++++. ..+|
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~----~~~d 73 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ----SANIFTLAFDVTDHPGTKAALSQLP----FIPE 73 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh----cCCCeEEEeeCCCHHHHHHHHHhcc----cCCC
Confidence 7899999999999999999999999999999998766555432 3457889999999999999988763 3579
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHHHH
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQL 173 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~ 173 (263)
.+|+|||.....+..+.+.++|++.+++|+.++++++++++|.|.+ ++++|++||..+..+.++...|+++|++++.+
T Consensus 74 ~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~ 151 (240)
T PRK06101 74 LWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC--GHRVVIVGSIASELALPRAEAYGASKAAVAYF 151 (240)
T ss_pred EEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCeEEEEechhhccCCCCCchhhHHHHHHHHH
Confidence 9999999764444455789999999999999999999999999965 47899999999999989999999999999999
Q ss_pred HHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCC
Q 024752 174 TKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS 242 (263)
Q Consensus 174 ~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~ 242 (263)
+++++.|+.++||++++++||+++|++...... ......+++++++.++.....
T Consensus 152 ~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~~---------------~~~~~~~~~~~a~~i~~~i~~ 205 (240)
T PRK06101 152 ARTLQLDLRPKGIEVVTVFPGFVATPLTDKNTF---------------AMPMIITVEQASQEIRAQLAR 205 (240)
T ss_pred HHHHHHHHHhcCceEEEEeCCcCCCCCcCCCCC---------------CCCcccCHHHHHHHHHHHHhc
Confidence 999999999999999999999999998653211 111235789999988765543
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-33 Score=228.41 Aligned_cols=205 Identities=28% Similarity=0.347 Sum_probs=168.7
Q ss_pred HHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCccEEEeCCCCCCCCCCC
Q 024752 29 VVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETT 108 (263)
Q Consensus 29 ~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~ 108 (263)
+|++|+++|++|++++|++++.+. ..++++|+++.++++++++++. +++|+||||||....
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~~-----------~~~~~~Dl~~~~~v~~~~~~~~----~~iD~li~nAG~~~~---- 61 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMTL-----------DGFIQADLGDPASIDAAVAALP----GRIDALFNIAGVPGT---- 61 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhhh-----------hHhhcccCCCHHHHHHHHHHhc----CCCeEEEECCCCCCC----
Confidence 478999999999999999775421 2356899999999999988763 589999999997522
Q ss_pred CCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccc---------------------------cCCCCc
Q 024752 109 EFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVI---------------------------AIPMCS 161 (263)
Q Consensus 109 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~---------------------------~~~~~~ 161 (263)
+.+++.+++|+.+++.+++.++|.|.+ .|+||++||.++.. +.++..
T Consensus 62 ----~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (241)
T PRK12428 62 ----APVELVARVNFLGLRHLTEALLPRMAP--GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALAT 135 (241)
T ss_pred ----CCHHHhhhhchHHHHHHHHHHHHhccC--CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCccc
Confidence 347899999999999999999999965 48999999998762 455678
Q ss_pred chhhHHHHHHHHHHHHH-HHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHc
Q 024752 162 IYASSKVAMNQLTKNLA-CEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC 240 (263)
Q Consensus 162 ~Y~~sK~a~~~~~~~~a-~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~ 240 (263)
.|++||+++++++++++ .|++++||+||+|+||+++|++......... ..... ....|+++..+|+|+++++.||+
T Consensus 136 ~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~-~~~~~--~~~~~~~~~~~pe~va~~~~~l~ 212 (241)
T PRK12428 136 GYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLG-QERVD--SDAKRMGRPATADEQAAVLVFLC 212 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhh-hHhhh--hcccccCCCCCHHHHHHHHHHHc
Confidence 89999999999999999 9999999999999999999998754321110 00011 12357788889999999999999
Q ss_pred CCCCCCccCcEEEeCCCcccc
Q 024752 241 LSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 241 s~~~~~~~G~~i~~dgG~~~~ 261 (263)
++.+.+++|+.+.+|||+...
T Consensus 213 s~~~~~~~G~~i~vdgg~~~~ 233 (241)
T PRK12428 213 SDAARWINGVNLPVDGGLAAT 233 (241)
T ss_pred ChhhcCccCcEEEecCchHHH
Confidence 988899999999999998654
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-31 Score=222.21 Aligned_cols=221 Identities=24% Similarity=0.292 Sum_probs=181.2
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
+|++|||||+|+||+++++.|+++|++|++++|+.+..+++.+.....+.++.++.+|+++++++.++++ +++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~i 74 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE-------WDV 74 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc-------CCC
Confidence 5799999999999999999999999999999999887777766666666678899999999998877653 479
Q ss_pred cEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHHH
Q 024752 93 NILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQ 172 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~ 172 (263)
|++|||||.....+..+.+.+.+++.+++|+.+++.+++.+++.+.+++.++||++||..+..+.++...|+++|++++.
T Consensus 75 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~~ 154 (257)
T PRK09291 75 DVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEA 154 (257)
T ss_pred CEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHHHHHHHHH
Confidence 99999999988778888899999999999999999999999999988877999999999988888888999999999999
Q ss_pred HHHHHHHHHccCCcEEEEEecCcccCCcccccccc-chh---HHH-HHHhHhcCCCCCCCChhhHHHHHHHHcC
Q 024752 173 LTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKD-SNF---LEH-ANRMVLRTPMLRPGEPNEVSSVVAFLCL 241 (263)
Q Consensus 173 ~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~---~~~-~~~~~~~~~~~~~~~~~~va~~~~~l~s 241 (263)
+++.++.++.+.||+++.|+||++.|++....... ..+ ... ........|. ...+++++++.+..++.
T Consensus 155 ~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~ 227 (257)
T PRK09291 155 IAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPL-EQFDPQEMIDAMVEVIP 227 (257)
T ss_pred HHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhccc-cCCCHHHHHHHHHHHhc
Confidence 99999999999999999999999999875432211 000 000 0000111222 23578898888776554
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-32 Score=220.68 Aligned_cols=219 Identities=23% Similarity=0.231 Sum_probs=192.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc--CCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
+.++|||+++|||+++|.++..+|++|.++.|+.++++++.++++-. ...+.+..+|++|.+++..++++++... +.
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~-~~ 112 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLE-GP 112 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhcc-CC
Confidence 68999999999999999999999999999999999999999998743 2337789999999999999999999887 89
Q ss_pred ccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccccccCCCCcchhhHHHHH
Q 024752 92 LNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVIAIPMCSIYASSKVAM 170 (263)
Q Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~ 170 (263)
+|.+|+|||...++.+.+.+.+.++..+++|++++++++++.++.|++.. .|+|+.+||.++..+.+++++|+++|+|+
T Consensus 113 ~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~al 192 (331)
T KOG1210|consen 113 IDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFAL 192 (331)
T ss_pred cceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHHH
Confidence 99999999999999999999999999999999999999999999999875 67999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHH
Q 024752 171 NQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAF 238 (263)
Q Consensus 171 ~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ 238 (263)
.+++.+++.|+.++||+|..+.|+.+.||.+.......+.. .+..+ -.....++|++|++++-
T Consensus 193 rgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP~~---t~ii~--g~ss~~~~e~~a~~~~~ 255 (331)
T KOG1210|consen 193 RGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKPEE---TKIIE--GGSSVIKCEEMAKAIVK 255 (331)
T ss_pred HHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCchh---eeeec--CCCCCcCHHHHHHHHHh
Confidence 99999999999999999999999999999875543322211 11111 12233568999988764
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=224.31 Aligned_cols=191 Identities=28% Similarity=0.374 Sum_probs=171.2
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc-CCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
--|++++||||+.|||++.|++||++|.+|++++|++++++.+++|+.+. +..+..+.+|+++++.+-+.+.+..+ +
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~--~ 124 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLA--G 124 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhc--C
Confidence 34699999999999999999999999999999999999999999999865 56788999999988763222222222 2
Q ss_pred CCccEEEeCCCCCC--CCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 90 GKLNILINNAGTFI--PKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 90 ~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
..+-+||||+|... |..+.+.+.+.+++.+.+|..+...+.+.++|.|.++++|-||++||.++..+.|....|+++|
T Consensus 125 ~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK 204 (312)
T KOG1014|consen 125 LDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASK 204 (312)
T ss_pred CceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHH
Confidence 47999999999987 5567888888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccc
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDT 203 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~ 203 (263)
+.++.|+++|+.||..+||.|-++.|..|.|+|..-
T Consensus 205 ~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~ 240 (312)
T KOG1014|consen 205 AFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKY 240 (312)
T ss_pred HHHHHHHHHHHHHHHhcCeEEEEeehhheecccccc
Confidence 999999999999999999999999999999998743
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-32 Score=211.88 Aligned_cols=163 Identities=39% Similarity=0.557 Sum_probs=153.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCC--chhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRN--ETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
|+++||||++|||++++++|+++|. +|++++|+ .+..+++.+++...+.++.++++|++++++++++++++.+.+ +
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~ 79 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRF-G 79 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHH-S
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccc-c
Confidence 7899999999999999999999966 78999999 777888888888888889999999999999999999999887 8
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHH
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAM 170 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~ 170 (263)
++|++|||||....+++.+.+.++|++.|++|+.+++++.++++| ++.++||++||..+..+.|+...|+++|+|+
T Consensus 80 ~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~~g~iv~~sS~~~~~~~~~~~~Y~askaal 155 (167)
T PF00106_consen 80 PLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP----QGGGKIVNISSIAGVRGSPGMSAYSASKAAL 155 (167)
T ss_dssp SESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HTTEEEEEEEEGGGTSSSTTBHHHHHHHHHH
T ss_pred cccccccccccccccccccccchhhhhccccccceeeeeeehhee----ccccceEEecchhhccCCCCChhHHHHHHHH
Confidence 999999999999988888899999999999999999999999999 3479999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 024752 171 NQLTKNLACEW 181 (263)
Q Consensus 171 ~~~~~~~a~e~ 181 (263)
++|++++++|+
T Consensus 156 ~~~~~~la~e~ 166 (167)
T PF00106_consen 156 RGLTQSLAAEL 166 (167)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 99999999996
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-31 Score=217.52 Aligned_cols=183 Identities=31% Similarity=0.376 Sum_probs=164.8
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
|++++|+++||||+|+||++++++|+++|+ +|++++|+.++.++ .+.++.++.+|+++++++.++++..
T Consensus 2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~--- 71 (238)
T PRK08264 2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-------LGPRVVPLQLDVTDPASVAAAAEAA--- 71 (238)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-------cCCceEEEEecCCCHHHHHHHHHhc---
Confidence 568899999999999999999999999999 99999999876543 3456888999999999998877653
Q ss_pred cCCCccEEEeCCCC-CCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhH
Q 024752 88 FDGKLNILINNAGT-FIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASS 166 (263)
Q Consensus 88 ~~~~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s 166 (263)
+++|++||++|. ....++.+.+.+++.+.+++|+.+++.+++++.|.+++++.+++|++||..+..+.++...|+.+
T Consensus 72 --~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~s 149 (238)
T PRK08264 72 --SDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSAS 149 (238)
T ss_pred --CCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHhHHH
Confidence 679999999998 45566778899999999999999999999999999988878999999999998888888999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccc
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDT 203 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~ 203 (263)
|++++.+++.++.++.+.|++++.++||.++|++...
T Consensus 150 K~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~ 186 (238)
T PRK08264 150 KAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAG 186 (238)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEeCCccccccccc
Confidence 9999999999999999999999999999999987543
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-31 Score=219.88 Aligned_cols=224 Identities=25% Similarity=0.292 Sum_probs=184.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
|+++||||+|+||+++++.|+++|++|++++|+.++.+... .. .+..+.+|+++++++.++++.+.+..++++|
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~----~~--~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~ 76 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN----SL--GFTGILLDLDDPESVERAADEVIALTDNRLY 76 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH----hC--CCeEEEeecCCHHHHHHHHHHHHHhcCCCCe
Confidence 78999999999999999999999999999999987665442 22 3677899999999999999988775446899
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHHHH
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQL 173 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~ 173 (263)
.+|||+|.....++.+.+.+++++.+++|+.|++++++.++|.|++.+.++||++||..+..+.++...|+++|++++.+
T Consensus 77 ~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~~~ 156 (256)
T PRK08017 77 GLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAW 156 (256)
T ss_pred EEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHHHHHHHHH
Confidence 99999998776777788999999999999999999999999999988788999999998888888899999999999999
Q ss_pred HHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 174 TKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 174 ~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
+++++.++.+.|++++.++||+++|++........... ...........+.+++|+++.+..++......
T Consensus 157 ~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~ 226 (256)
T PRK08017 157 SDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDK---PVENPGIAARFTLGPEAVVPKLRHALESPKPK 226 (256)
T ss_pred HHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhcc---chhhhHHHhhcCCCHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999998765432211000 00000000123478999999999888765443
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.7e-30 Score=212.68 Aligned_cols=180 Identities=22% Similarity=0.334 Sum_probs=155.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
|+++|||+++|||++++++|+++|++|++++|+++..+++. ++ .++.+..+|++++++++++++.+.+ +++|
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~----~~~~~~~~D~~d~~~~~~~~~~~~~---~~id 73 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ-AL----PGVHIEKLDMNDPASLDQLLQRLQG---QRFD 73 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH-hc----cccceEEcCCCCHHHHHHHHHHhhc---CCCC
Confidence 78999999999999999999999999999999987655432 21 2467788999999999999988753 4799
Q ss_pred EEEeCCCCCCC--CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC---CCCcchhhHHH
Q 024752 94 ILINNAGTFIP--KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI---PMCSIYASSKV 168 (263)
Q Consensus 94 ~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~---~~~~~Y~~sK~ 168 (263)
++|||||+... .++.+.+.+++++.+++|+.+++.++++++|.|++. .++++++||..+..+. .....|+++|+
T Consensus 74 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~ 152 (225)
T PRK08177 74 LLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG-QGVLAFMSSQLGSVELPDGGEMPLYKASKA 152 (225)
T ss_pred EEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc-CCEEEEEccCccccccCCCCCccchHHHHH
Confidence 99999998743 346678899999999999999999999999998754 4799999997765543 35678999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccc
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLD 202 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~ 202 (263)
+++.++++++.|++++||++++|+||+++|++..
T Consensus 153 a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~ 186 (225)
T PRK08177 153 ALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGG 186 (225)
T ss_pred HHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCC
Confidence 9999999999999999999999999999999864
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-29 Score=204.78 Aligned_cols=213 Identities=23% Similarity=0.269 Sum_probs=174.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
|+++||||+++||++++++|+++|++|++++|+++..+++. .. .+.++.+|+++.++++++++++.. +++|
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~----~~--~~~~~~~D~~~~~~v~~~~~~~~~---~~~d 72 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ----AL--GAEALALDVADPASVAGLAWKLDG---EALD 72 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH----hc--cceEEEecCCCHHHHHHHHHHhcC---CCCC
Confidence 68999999999999999999999999999999987665443 22 245789999999999998876632 4799
Q ss_pred EEEeCCCCCCC--CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCC---cchhhHHH
Q 024752 94 ILINNAGTFIP--KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMC---SIYASSKV 168 (263)
Q Consensus 94 ~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~---~~Y~~sK~ 168 (263)
++|||+|.... .+..+.+.++|++.+++|+.+++.++++++|.|.+. .+++++++|..+..+.... ..|+++|+
T Consensus 73 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~ 151 (222)
T PRK06953 73 AAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA-GGVLAVLSSRMGSIGDATGTTGWLYRASKA 151 (222)
T ss_pred EEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc-CCeEEEEcCcccccccccCCCccccHHhHH
Confidence 99999998633 345567899999999999999999999999998664 5899999998776653332 25999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCcc
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~ 248 (263)
+++.+++.++.++. +++++.|+||+++|++.... .+..+++.+..+..++.......+
T Consensus 152 a~~~~~~~~~~~~~--~i~v~~v~Pg~i~t~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~ 209 (222)
T PRK06953 152 ALNDALRAASLQAR--HATCIALHPGWVRTDMGGAQ--------------------AALDPAQSVAGMRRVIAQATRRDN 209 (222)
T ss_pred HHHHHHHHHhhhcc--CcEEEEECCCeeecCCCCCC--------------------CCCCHHHHHHHHHHHHHhcCcccC
Confidence 99999999998863 79999999999999985421 123578888888776655567889
Q ss_pred CcEEEeCCCc
Q 024752 249 GQVICVDGGY 258 (263)
Q Consensus 249 G~~i~~dgG~ 258 (263)
|+.+..|++.
T Consensus 210 ~~~~~~~~~~ 219 (222)
T PRK06953 210 GRFFQYDGVE 219 (222)
T ss_pred ceEEeeCCcC
Confidence 9999999763
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-29 Score=208.39 Aligned_cols=198 Identities=18% Similarity=0.143 Sum_probs=150.8
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
+..+++|+++||||++|||++++++|+++|++|++++|+.....+. . ... ....+.+|+++.+++.+.
T Consensus 9 ~~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~---~-~~~-~~~~~~~D~~~~~~~~~~------- 76 (245)
T PRK12367 9 QSTWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSES---N-DES-PNEWIKWECGKEESLDKQ------- 76 (245)
T ss_pred HHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhh---h-ccC-CCeEEEeeCCCHHHHHHh-------
Confidence 3457899999999999999999999999999999999987322111 1 111 235678999999887643
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC---CCceEEEEccccccccCCCCcchh
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA---GNGNIIFISSVAGVIAIPMCSIYA 164 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~~~iv~vsS~~~~~~~~~~~~Y~ 164 (263)
+ +++|++|||||+... .+.+.++|++.+++|+.++++++++++|.|.++ +++.+++.+|.++..+ ++...|+
T Consensus 77 ~-~~iDilVnnAG~~~~---~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-~~~~~Y~ 151 (245)
T PRK12367 77 L-ASLDVLILNHGINPG---GRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-ALSPSYE 151 (245)
T ss_pred c-CCCCEEEECCccCCc---CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-CCCchhH
Confidence 3 689999999997533 345789999999999999999999999999763 2334545556555443 4567899
Q ss_pred hHHHHHHHHH---HHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcC
Q 024752 165 SSKVAMNQLT---KNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCL 241 (263)
Q Consensus 165 ~sK~a~~~~~---~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s 241 (263)
+||+|+..+. +.++.|+.+.|++++.++||+++|++.. ....+|+++|+.+++.+.
T Consensus 152 aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~---------------------~~~~~~~~vA~~i~~~~~ 210 (245)
T PRK12367 152 ISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNP---------------------IGIMSADFVAKQILDQAN 210 (245)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccCc---------------------cCCCCHHHHHHHHHHHHh
Confidence 9999986544 4444455778999999999999988631 013579999999988876
Q ss_pred CC
Q 024752 242 SA 243 (263)
Q Consensus 242 ~~ 243 (263)
..
T Consensus 211 ~~ 212 (245)
T PRK12367 211 LG 212 (245)
T ss_pred cC
Confidence 44
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.6e-29 Score=203.13 Aligned_cols=220 Identities=27% Similarity=0.320 Sum_probs=180.9
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
.|+++||||+++||+++++.|+++ ++|++++|+.+..++..++. ..+.++.+|+++++++.++++.+ +++
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~-----~~i 72 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL----PGATPFPVDLTDPEAIAAAVEQL-----GRL 72 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh----ccceEEecCCCCHHHHHHHHHhc-----CCC
Confidence 589999999999999999999999 99999999987665544332 24678899999999988887653 579
Q ss_pred cEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHHH
Q 024752 93 NILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQ 172 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~ 172 (263)
|++||++|.....+..+.+.++|.+.+++|+.+.+.+.+.+++.|++. .+++|++||..+..+.++...|+.+|++++.
T Consensus 73 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~~~~~y~~~K~a~~~ 151 (227)
T PRK08219 73 DVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLRANPGWGSYAASKFALRA 151 (227)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcCcCCCCchHHHHHHHHHH
Confidence 999999998776667778899999999999999999999999998876 5799999999998888889999999999999
Q ss_pred HHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCcEE
Q 024752 173 LTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVI 252 (263)
Q Consensus 173 ~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i 252 (263)
+++.++.++... ++++++.||++++++........ ....+..++.+++|+++.++++++... .|++.
T Consensus 152 ~~~~~~~~~~~~-i~~~~i~pg~~~~~~~~~~~~~~---------~~~~~~~~~~~~~dva~~~~~~l~~~~---~~~~~ 218 (227)
T PRK08219 152 LADALREEEPGN-VRVTSVHPGRTDTDMQRGLVAQE---------GGEYDPERYLRPETVAKAVRFAVDAPP---DAHIT 218 (227)
T ss_pred HHHHHHHHhcCC-ceEEEEecCCccchHhhhhhhhh---------ccccCCCCCCCHHHHHHHHHHHHcCCC---CCccc
Confidence 999999988766 99999999999887644322110 112244567899999999999987543 36665
Q ss_pred EeCC
Q 024752 253 CVDG 256 (263)
Q Consensus 253 ~~dg 256 (263)
++..
T Consensus 219 ~~~~ 222 (227)
T PRK08219 219 EVVV 222 (227)
T ss_pred eEEE
Confidence 5543
|
|
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-29 Score=197.85 Aligned_cols=239 Identities=24% Similarity=0.189 Sum_probs=185.9
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
+|++|+||+|.|||..++..+..++-.+...+++....+ ......+.+........|++...-+.++.+..++++ ++.
T Consensus 6 r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~-~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~-gkr 83 (253)
T KOG1204|consen 6 RKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE-LEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKG-GKR 83 (253)
T ss_pred ceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc-ccceEEEecCCcceechHHHHHHHHHHHHhhhhhcC-Cce
Confidence 678999999999999999998888765544444433322 111111123334445667887777788888888876 799
Q ss_pred cEEEeCCCCCCCC---CCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccccccCCCCcchhhHHH
Q 024752 93 NILINNAGTFIPK---ETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 93 d~li~~ag~~~~~---~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
|++|||||...+- ..+..|.++|.+.|+.|+++.+.+.+.++|.+++.+ .+.+|++||.++..++++++.|+.+|+
T Consensus 84 ~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~~Ka 163 (253)
T KOG1204|consen 84 DIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCSSKA 163 (253)
T ss_pred eEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhhhHH
Confidence 9999999988662 234678899999999999999999999999999874 789999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccc-hhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDS-NFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
|.++|.+.+|.|=. .+|++.++.||.++|+|.....+.. ..+.....+......++..+|...++.+..|+-... .+
T Consensus 164 Ar~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~~ll~~~~~a~~l~~L~e~~~-f~ 241 (253)
T KOG1204|consen 164 ARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESGQLLDPQVTAKVLAKLLEKGD-FV 241 (253)
T ss_pred HHHHHHHHHhhcCc-cceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcCCcCChhhHHHHHHHHHHhcC-cc
Confidence 99999999999866 7999999999999999986665544 222222344444456777889999999988875443 78
Q ss_pred cCcEEEeC
Q 024752 248 TGQVICVD 255 (263)
Q Consensus 248 ~G~~i~~d 255 (263)
+||.+.+.
T Consensus 242 sG~~vdy~ 249 (253)
T KOG1204|consen 242 SGQHVDYY 249 (253)
T ss_pred cccccccc
Confidence 99988653
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-26 Score=202.73 Aligned_cols=199 Identities=24% Similarity=0.229 Sum_probs=153.8
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
..+++++|+++||||+||||++++++|+++|++|++++|+.+++++.. ......+..+.+|+++++++.+.+
T Consensus 172 ta~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~---~~~~~~v~~v~~Dvsd~~~v~~~l----- 243 (406)
T PRK07424 172 TALSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEI---NGEDLPVKTLHWQVGQEAALAELL----- 243 (406)
T ss_pred cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---hhcCCCeEEEEeeCCCHHHHHHHh-----
Confidence 345788999999999999999999999999999999999876654332 222334677889999998876543
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCC----ceEEEEccccccccCCCCcc
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGN----GNIIFISSVAGVIAIPMCSI 162 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~----~~iv~vsS~~~~~~~~~~~~ 162 (263)
+++|++|||||.... .+.+.+++++.+++|+.|++.++++++|.|++++. +.+|++|+ +. ...+....
T Consensus 244 ---~~IDiLInnAGi~~~---~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~-~~~~~~~~ 315 (406)
T PRK07424 244 ---EKVDILIINHGINVH---GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AE-VNPAFSPL 315 (406)
T ss_pred ---CCCCEEEECCCcCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-cc-ccCCCchH
Confidence 579999999997643 25688999999999999999999999999987642 34566554 33 33344567
Q ss_pred hhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCC
Q 024752 163 YASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS 242 (263)
Q Consensus 163 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~ 242 (263)
|++||+|+..+++ ++++. .++.+..+.||+++|++.+ . ...+||++|+.+++.++.
T Consensus 316 Y~ASKaAl~~l~~-l~~~~--~~~~I~~i~~gp~~t~~~~--------------------~-~~~spe~vA~~il~~i~~ 371 (406)
T PRK07424 316 YELSKRALGDLVT-LRRLD--APCVVRKLILGPFKSNLNP--------------------I-GVMSADWVAKQILKLAKR 371 (406)
T ss_pred HHHHHHHHHHHHH-HHHhC--CCCceEEEEeCCCcCCCCc--------------------C-CCCCHHHHHHHHHHHHHC
Confidence 9999999999985 44442 4677788899999887631 1 125799999999988876
Q ss_pred CCC
Q 024752 243 ATS 245 (263)
Q Consensus 243 ~~~ 245 (263)
...
T Consensus 372 ~~~ 374 (406)
T PRK07424 372 DFR 374 (406)
T ss_pred CCC
Confidence 654
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-25 Score=228.99 Aligned_cols=183 Identities=21% Similarity=0.203 Sum_probs=160.5
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHC-CCeEEEeeCCc-------------------------------------------
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAF-GAIVHTCSRNE------------------------------------------- 47 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~-g~~V~~~~r~~------------------------------------------- 47 (263)
+++++|||||++|||.+++++|+++ |++|++++|+.
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence 4899999999999999999999998 69999999982
Q ss_pred ----hhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhh
Q 024752 48 ----TELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNF 123 (263)
Q Consensus 48 ----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~ 123 (263)
....+..+++.+.+.++.++.||++|.++++++++++.+. +++|.||||||+...+.+.+.+.++|++.|++|+
T Consensus 2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~--g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv 2153 (2582)
T TIGR02813 2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT--LQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKV 2153 (2582)
T ss_pred cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh--CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHH
Confidence 1112233445556778999999999999999999999876 4799999999998888889999999999999999
Q ss_pred HhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccc
Q 024752 124 ESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLD 202 (263)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~ 202 (263)
.|.+++++++.+.+ .++||++||..+..+.++...|+++|++++.+++.++.++. +++|++|+||+++|+|..
T Consensus 2154 ~G~~~Ll~al~~~~----~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~--~irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813 2154 DGLLSLLAALNAEN----IKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNP--SAKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred HHHHHHHHHHHHhC----CCeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcC--CcEEEEEECCeecCCccc
Confidence 99999999986543 35899999999999999999999999999999999999874 499999999999998863
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-25 Score=177.35 Aligned_cols=244 Identities=18% Similarity=0.197 Sum_probs=188.3
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCC-----eEEEeeCCchhHHHHHHHHHhcC----CceEEEeccCCCHHHHHHHHHH
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGA-----IVHTCSRNETELNQRIQEWKSKG----LQVSGSVCDLKIRAQREKLMET 83 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~-----~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~ 83 (263)
.|+++|||+++|||.++|.+|.+..- ++++++|+-.+++++++.+.+.. .++.++..|+++..++.++..+
T Consensus 3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d 82 (341)
T KOG1478|consen 3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD 82 (341)
T ss_pred ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence 58999999999999999999987643 58899999999999999998753 3588999999999999999999
Q ss_pred HHhhcCCCccEEEeCCCCCCCCCCCC---------------------------CCHHHHHHHHHhhhHhHHHHHHHHhHH
Q 024752 84 VSSQFDGKLNILINNAGTFIPKETTE---------------------------FTEEDFSTVMTTNFESAYHLSQLAHPL 136 (263)
Q Consensus 84 ~~~~~~~~id~li~~ag~~~~~~~~~---------------------------~~~~~~~~~~~~n~~~~~~~~~~~~~~ 136 (263)
+.++| .++|+++.|||+.....+.. .+.+++...|+.|++|++++++.+.|+
T Consensus 83 i~~rf-~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl 161 (341)
T KOG1478|consen 83 IKQRF-QRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL 161 (341)
T ss_pred HHHHh-hhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence 99999 89999999999885433221 257889999999999999999999999
Q ss_pred HhhCCCceEEEEccccccc---------cCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccccc
Q 024752 137 LKSAGNGNIIFISSVAGVI---------AIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKD 207 (263)
Q Consensus 137 ~~~~~~~~iv~vsS~~~~~---------~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~ 207 (263)
+-...+..+|++||..+.. ...+..+|..||.+++-+.-++-+.+.+.|+..++++||..-|.++......
T Consensus 162 l~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~~~~l~~ 241 (341)
T KOG1478|consen 162 LCHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSFSEYLNP 241 (341)
T ss_pred hhcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchhhhhhhh
Confidence 9988888999999988754 3457788999999999999999999999999999999999999887665432
Q ss_pred chhHHHHHHhH-h---cCCCCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCcc
Q 024752 208 SNFLEHANRMV-L---RTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYS 259 (263)
Q Consensus 208 ~~~~~~~~~~~-~---~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~ 259 (263)
--+.-....+. . ..|-. -.+|-..+++.+|++-.... ---|.|-..+..+
T Consensus 242 ~~~~~~~~~fyl~rllgspwh-~id~y~aa~A~vw~~l~~p~-~~~q~iKygsAtt 295 (341)
T KOG1478|consen 242 FTYFGMLCGFYLARLLGSPWH-NIDPYKAANAPVWVTLANPN-FEKQDIKYGSATT 295 (341)
T ss_pred HHHHHHHHHHHHHHHhcCccc-ccCccccccchhhhhhcCcc-cccccchhhhccc
Confidence 21111111111 1 11211 13566677777766532222 2235555444433
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.3e-25 Score=171.78 Aligned_cols=175 Identities=24% Similarity=0.343 Sum_probs=150.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHH---HHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQR---IQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
|+++||||+++||++++++|+++|+ .|++++|+.+..+.. .+++...+.++.++.+|++++++++++++++.+.+
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 79 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARL- 79 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence 5799999999999999999999997 688888876554432 34555556678889999999999999999998887
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
+++|.+|||+|.....++.+.+.+++++.+++|+.+++.+++.+. +.+.++++++||..+..+.++...|+++|++
T Consensus 80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~ 155 (180)
T smart00822 80 GPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTR----DLPLDFFVLFSSVAGVLGNPGQANYAAANAF 155 (180)
T ss_pred CCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhc----cCCcceEEEEccHHHhcCCCCchhhHHHHHH
Confidence 899999999998776677788999999999999999999999983 3446899999999998888889999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEEecCccc
Q 024752 170 MNQLTKNLACEWAKDKIRVNTVAPWVIR 197 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~v~~v~PG~v~ 197 (263)
++.+++.++. .|+++..+.||++.
T Consensus 156 ~~~~~~~~~~----~~~~~~~~~~g~~~ 179 (180)
T smart00822 156 LDALAAHRRA----RGLPATSINWGAWA 179 (180)
T ss_pred HHHHHHHHHh----cCCceEEEeecccc
Confidence 9999987643 58999999999875
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.9e-24 Score=192.69 Aligned_cols=221 Identities=18% Similarity=0.149 Sum_probs=165.2
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc-----C----CceEEEeccCCCHHHHHHHH
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-----G----LQVSGSVCDLKIRAQREKLM 81 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-----~----~~~~~~~~D~~~~~~~~~~~ 81 (263)
.+||+++||||+|+||++++++|+++|++|++++|+.+.++.+.+++... + .++.++.+|+++.+++.+++
T Consensus 78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL 157 (576)
T PLN03209 78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL 157 (576)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence 46899999999999999999999999999999999999887776655431 1 35788999999998876643
Q ss_pred HHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccc-ccCCCC
Q 024752 82 ETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGV-IAIPMC 160 (263)
Q Consensus 82 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~-~~~~~~ 160 (263)
+.+|+||||+|.... ...++...+++|+.+..++++++. +.+.++||++||..+. .+.+.
T Consensus 158 --------ggiDiVVn~AG~~~~------~v~d~~~~~~VN~~Gt~nLl~Aa~----~agVgRIV~VSSiga~~~g~p~- 218 (576)
T PLN03209 158 --------GNASVVICCIGASEK------EVFDVTGPYRIDYLATKNLVDAAT----VAKVNHFILVTSLGTNKVGFPA- 218 (576)
T ss_pred --------cCCCEEEEccccccc------cccchhhHHHHHHHHHHHHHHHHH----HhCCCEEEEEccchhcccCccc-
Confidence 579999999997532 122467889999999999999984 3456899999998764 23222
Q ss_pred cchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHc
Q 024752 161 SIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC 240 (263)
Q Consensus 161 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~ 240 (263)
..|. +|.++..+.+.+..++...||+++.|+||++.+++..... .... .......+.++.+..+|||+.++|++
T Consensus 219 ~~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~~-t~~v----~~~~~d~~~gr~isreDVA~vVvfLa 292 (576)
T PLN03209 219 AILN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYKE-THNL----TLSEEDTLFGGQVSNLQVAELMACMA 292 (576)
T ss_pred cchh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCcccccc-ccce----eeccccccCCCccCHHHHHHHHHHHH
Confidence 2344 7888888888898999899999999999999987543211 1110 11111245677789999999999999
Q ss_pred CCCCCCccCcEEEeCCC
Q 024752 241 LSATSYVTGQVICVDGG 257 (263)
Q Consensus 241 s~~~~~~~G~~i~~dgG 257 (263)
++... -.++++.+-.+
T Consensus 293 sd~~a-s~~kvvevi~~ 308 (576)
T PLN03209 293 KNRRL-SYCKVVEVIAE 308 (576)
T ss_pred cCchh-ccceEEEEEeC
Confidence 85431 23556655444
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.7e-24 Score=185.28 Aligned_cols=219 Identities=16% Similarity=0.100 Sum_probs=157.7
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCC--CeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
+++|+++||||+|+||++++++|+++| ++|++++|+......+.+++. ..++.++.+|++|++++.++++
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~l~~~~~------ 73 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP--APCLRFFIGDVRDKERLTRALR------ 73 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHh------
Confidence 578999999999999999999999986 689999998765444433331 2457889999999999887763
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
.+|++||+||.... +..+ .+..+.+++|+.++.++++++.+ .+.++||++||..... +...|+++|+
T Consensus 74 --~iD~Vih~Ag~~~~-~~~~---~~~~~~~~~Nv~g~~~ll~aa~~----~~~~~iV~~SS~~~~~---p~~~Y~~sK~ 140 (324)
T TIGR03589 74 --GVDYVVHAAALKQV-PAAE---YNPFECIRTNINGAQNVIDAAID----NGVKRVVALSTDKAAN---PINLYGATKL 140 (324)
T ss_pred --cCCEEEECcccCCC-chhh---cCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeCCCCCC---CCCHHHHHHH
Confidence 58999999997543 2222 22356899999999999999854 4457999999975443 3467999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCC------CCCCChhhHHHHHHHHcCC
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPM------LRPGEPNEVSSVVAFLCLS 242 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~va~~~~~l~s~ 242 (263)
+.+.++++++.++...|+++++++||.+..|...-. ..+......-....|. ..+..++|++++++.++..
T Consensus 141 ~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~~i---~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~ 217 (324)
T TIGR03589 141 ASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGSVV---PFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLER 217 (324)
T ss_pred HHHHHHHHHHhhccccCcEEEEEeecceeCCCCCcH---HHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhh
Confidence 999999999888888899999999999998742111 1111110000001121 2357899999999877643
Q ss_pred CCCCccCcEEEeCCC
Q 024752 243 ATSYVTGQVICVDGG 257 (263)
Q Consensus 243 ~~~~~~G~~i~~dgG 257 (263)
.. .|+.+ +..|
T Consensus 218 ~~---~~~~~-~~~~ 228 (324)
T TIGR03589 218 ML---GGEIF-VPKI 228 (324)
T ss_pred CC---CCCEE-ccCC
Confidence 21 35655 4444
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-23 Score=182.87 Aligned_cols=231 Identities=14% Similarity=0.010 Sum_probs=165.3
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
++||++|||||+|+||++++++|+++|++|++++|+..........+. .+.++.++.+|+++.+++.++++. .
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~------~ 74 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLN-LAKKIEDHFGDIRDAAKLRKAIAE------F 74 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHh-hcCCceEEEccCCCHHHHHHHHhh------c
Confidence 578999999999999999999999999999999998765443333332 233577789999999999888874 2
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccc------------cCC
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVI------------AIP 158 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~------------~~~ 158 (263)
++|++||+|+.... ..+.+++...+++|+.+++++++++.+. ...+++|++||...+. +..
T Consensus 75 ~~d~vih~A~~~~~----~~~~~~~~~~~~~N~~g~~~ll~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~ 147 (349)
T TIGR02622 75 KPEIVFHLAAQPLV----RKSYADPLETFETNVMGTVNLLEAIRAI---GSVKAVVNVTSDKCYRNDEWVWGYRETDPLG 147 (349)
T ss_pred CCCEEEECCccccc----ccchhCHHHHHHHhHHHHHHHHHHHHhc---CCCCEEEEEechhhhCCCCCCCCCccCCCCC
Confidence 68999999996432 2355677889999999999999987321 1246999999965431 123
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHcc----CCcEEEEEecCcccCCccccccccchhHHHHHHhHhc--------CCCCCC
Q 024752 159 MCSIYASSKVAMNQLTKNLACEWAK----DKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLR--------TPMLRP 226 (263)
Q Consensus 159 ~~~~Y~~sK~a~~~~~~~~a~e~~~----~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~ 226 (263)
+...|+.+|.+.+.+++.++.++.+ +|++++.++|+.+..|..... .............. .....+
T Consensus 148 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~--~~~~~~~~~~~~~g~~~~~~~g~~~rd~ 225 (349)
T TIGR02622 148 GHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAE--DRLIPDVIRAFSSNKIVIIRNPDATRPW 225 (349)
T ss_pred CCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchh--hhhhHHHHHHHhcCCCeEECCCCcccce
Confidence 4568999999999999999988865 489999999999998753111 01111111111111 112345
Q ss_pred CChhhHHHHHHHHcCCC--CCCccCcEEEeCCC
Q 024752 227 GEPNEVSSVVAFLCLSA--TSYVTGQVICVDGG 257 (263)
Q Consensus 227 ~~~~~va~~~~~l~s~~--~~~~~G~~i~~dgG 257 (263)
...+|++++++.++... .....|+.+++.+|
T Consensus 226 i~v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~ 258 (349)
T TIGR02622 226 QHVLEPLSGYLLLAEKLFTGQAEFAGAWNFGPR 258 (349)
T ss_pred eeHHHHHHHHHHHHHHHhhcCccccceeeeCCC
Confidence 67899999988766421 11123679999875
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.9e-23 Score=177.07 Aligned_cols=223 Identities=14% Similarity=0.124 Sum_probs=160.4
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc--CCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
++|++|||||+|+||++++++|+++|++|+++.|+....+......... ..++.++.+|+++++++.++++
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------- 76 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID------- 76 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------
Confidence 4799999999999999999999999999999999877654432222211 2468889999999998887763
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCC-----------
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIP----------- 158 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~----------- 158 (263)
++|++||+||.... ..+.+.+.+.+++|+.+++++++++.+.+ +.++||++||..+..+..
T Consensus 77 -~~d~vih~A~~~~~----~~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~~E 148 (325)
T PLN02989 77 -GCETVFHTASPVAI----TVKTDPQVELINPAVNGTINVLRTCTKVS---SVKRVILTSSMAAVLAPETKLGPNDVVDE 148 (325)
T ss_pred -CCCEEEEeCCCCCC----CCCCChHHHHHHHHHHHHHHHHHHHHHcC---CceEEEEecchhheecCCccCCCCCccCc
Confidence 58999999996532 22345678899999999999999987653 247999999986643211
Q ss_pred -----------CCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhH-hcCCC---
Q 024752 159 -----------MCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMV-LRTPM--- 223 (263)
Q Consensus 159 -----------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~--- 223 (263)
....|+.||.+.+.+++.++.++ |++++.++|+.++.|....... .......... ...+.
T Consensus 149 ~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~~~~~~--~~~~~i~~~~~~~~~~~~~ 223 (325)
T PLN02989 149 TFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDN---EIDLIVLNPGLVTGPILQPTLN--FSVAVIVELMKGKNPFNTT 223 (325)
T ss_pred CCCCchhHhcccccchHHHHHHHHHHHHHHHHHc---CCeEEEEcCCceeCCCCCCCCC--chHHHHHHHHcCCCCCCCc
Confidence 02469999999999999887654 8999999999999987543211 0011111111 11222
Q ss_pred -CCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCC
Q 024752 224 -LRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGG 257 (263)
Q Consensus 224 -~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG 257 (263)
..+..++|++++++.++..... +..++++|+
T Consensus 224 ~r~~i~v~Dva~a~~~~l~~~~~---~~~~ni~~~ 255 (325)
T PLN02989 224 HHRFVDVRDVALAHVKALETPSA---NGRYIIDGP 255 (325)
T ss_pred CcCeeEHHHHHHHHHHHhcCccc---CceEEEecC
Confidence 3567789999998877653321 346788554
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-22 Score=160.24 Aligned_cols=173 Identities=21% Similarity=0.319 Sum_probs=139.6
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCc---hhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNE---TELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
++||||+.+|||..+++.|+++|+ +|++++|+. ...++..+++++.+.++.++.+|++|++++.++++++.+.+ +
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~-~ 80 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRF-G 80 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTS-S
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhcc-C
Confidence 689999999999999999999987 799999993 34556788888889999999999999999999999999998 8
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHH
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAM 170 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~ 170 (263)
+++.|||+||.....++.+.+.+++++.+...+.+..++.+.+.+ .+-..+|.+||+.+..+.++...|+++.+.+
T Consensus 81 ~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~----~~l~~~i~~SSis~~~G~~gq~~YaaAN~~l 156 (181)
T PF08659_consen 81 PIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN----RPLDFFILFSSISSLLGGPGQSAYAAANAFL 156 (181)
T ss_dssp -EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT----TTTSEEEEEEEHHHHTT-TTBHHHHHHHHHH
T ss_pred CcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhc----CCCCeEEEECChhHhccCcchHhHHHHHHHH
Confidence 999999999998888899999999999999999999999998844 4457999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEEecCcc
Q 024752 171 NQLTKNLACEWAKDKIRVNTVAPWVI 196 (263)
Q Consensus 171 ~~~~~~~a~e~~~~gi~v~~v~PG~v 196 (263)
+.+++..+. .|.++.+|..|..
T Consensus 157 da~a~~~~~----~g~~~~sI~wg~W 178 (181)
T PF08659_consen 157 DALARQRRS----RGLPAVSINWGAW 178 (181)
T ss_dssp HHHHHHHHH----TTSEEEEEEE-EB
T ss_pred HHHHHHHHh----CCCCEEEEEcccc
Confidence 999986544 3778888887754
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.3e-22 Score=172.75 Aligned_cols=232 Identities=17% Similarity=0.053 Sum_probs=155.3
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHH-HHHHHHH----hcCCceEEEeccCCCHHHHHHHHHH
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN-QRIQEWK----SKGLQVSGSVCDLKIRAQREKLMET 83 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~-~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~~ 83 (263)
-|+++|++|||||+|+||++++++|+++|++|++++|+..... ...+.+. ..+.++.++.+|+++.+++.++++.
T Consensus 2 ~~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 81 (340)
T PLN02653 2 GDPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDD 81 (340)
T ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHH
Confidence 3688999999999999999999999999999999998754211 1112211 1234578899999999999888875
Q ss_pred HHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEcccccccc------
Q 024752 84 VSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVIA------ 156 (263)
Q Consensus 84 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~------ 156 (263)
. .+|+|||+|+...... ..+..+..+++|+.++.++++++.+.+.+++ ..++|++||...+..
T Consensus 82 ~------~~d~Vih~A~~~~~~~----~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~ 151 (340)
T PLN02653 82 I------KPDEVYNLAAQSHVAV----SFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQS 151 (340)
T ss_pred c------CCCEEEECCcccchhh----hhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCC
Confidence 3 5899999999764432 3345677889999999999999987765431 137889988643321
Q ss_pred ----CCCCcchhhHHHHHHHHHHHHHHHHcc---CCcEEEEEecCcccCCccccccccchhHHHHHHhHh----------
Q 024752 157 ----IPMCSIYASSKVAMNQLTKNLACEWAK---DKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVL---------- 219 (263)
Q Consensus 157 ----~~~~~~Y~~sK~a~~~~~~~~a~e~~~---~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------- 219 (263)
..+...|+.||.+.+.++++++.++.- .++.++.+.|+.-.+.+ ...+.........
T Consensus 152 E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~------~~~~~~~~~~~~~~~~~~~~~g~ 225 (340)
T PLN02653 152 ETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFV------TRKITRAVGRIKVGLQKKLFLGN 225 (340)
T ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccc------hhHHHHHHHHHHcCCCCceEeCC
Confidence 113567999999999999999887631 12333334444222110 0011111111111
Q ss_pred cCCCCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCccc
Q 024752 220 RTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 220 ~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
......+...+|++++++.++... .+..+++.+|..+
T Consensus 226 g~~~rd~i~v~D~a~a~~~~~~~~----~~~~yni~~g~~~ 262 (340)
T PLN02653 226 LDASRDWGFAGDYVEAMWLMLQQE----KPDDYVVATEESH 262 (340)
T ss_pred CcceecceeHHHHHHHHHHHHhcC----CCCcEEecCCCce
Confidence 111235678999999998877532 1467999888754
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.1e-22 Score=169.79 Aligned_cols=224 Identities=17% Similarity=0.134 Sum_probs=157.0
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHh--cCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS--KGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
+-+||+++||||+|+||++++++|+++|++|+++.|+....+........ ...++.++.+|+++++++.++++
T Consensus 2 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 76 (322)
T PLN02986 2 NGGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE----- 76 (322)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh-----
Confidence 35689999999999999999999999999999999987655433322221 12457889999999998887774
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccc-cC---------
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVI-AI--------- 157 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-~~--------- 157 (263)
.+|++||+|+..... ..+...+.+++|+.++.++++++... .+.++||++||..... +.
T Consensus 77 ---~~d~vih~A~~~~~~-----~~~~~~~~~~~nv~gt~~ll~~~~~~---~~v~rvV~~SS~~~~~~~~~~~~~~~~~ 145 (322)
T PLN02986 77 ---GCDAVFHTASPVFFT-----VKDPQTELIDPALKGTINVLNTCKET---PSVKRVILTSSTAAVLFRQPPIEANDVV 145 (322)
T ss_pred ---CCCEEEEeCCCcCCC-----CCCchhhhhHHHHHHHHHHHHHHHhc---CCccEEEEecchhheecCCccCCCCCCc
Confidence 489999999964321 11223568999999999999987432 2346999999986531 11
Q ss_pred -------C-----CCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcC----
Q 024752 158 -------P-----MCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRT---- 221 (263)
Q Consensus 158 -------~-----~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~---- 221 (263)
| ....|+.||.+.+.+++.+.+++ |++++.++|+.+.+|........ .......+....
T Consensus 146 ~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~~~--~~~~~~~~~~g~~~~~ 220 (322)
T PLN02986 146 DETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDN---GIDMVVLNPGFICGPLLQPTLNF--SVELIVDFINGKNLFN 220 (322)
T ss_pred CcccCCChHHhhccccchHHHHHHHHHHHHHHHHHh---CCeEEEEcccceeCCCCCCCCCc--cHHHHHHHHcCCCCCC
Confidence 0 13569999999999998887654 89999999999999875431110 001111111111
Q ss_pred -CCCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCC
Q 024752 222 -PMLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGG 257 (263)
Q Consensus 222 -~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG 257 (263)
....+.+++|+|++++.++..... ++.++++|.
T Consensus 221 ~~~~~~v~v~Dva~a~~~al~~~~~---~~~yni~~~ 254 (322)
T PLN02986 221 NRFYRFVDVRDVALAHIKALETPSA---NGRYIIDGP 254 (322)
T ss_pred CcCcceeEHHHHHHHHHHHhcCccc---CCcEEEecC
Confidence 123467899999999877654322 347888543
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-21 Score=169.14 Aligned_cols=239 Identities=12% Similarity=0.040 Sum_probs=166.7
Q ss_pred ccccccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHh-----cCCceEEEeccCCCHHHH
Q 024752 3 DFREQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS-----KGLQVSGSVCDLKIRAQR 77 (263)
Q Consensus 3 ~~~~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~ 77 (263)
++.+..+-|++|+++||||+|.||++++++|.++|++|++++|..........+... ...++.++.+|+++.+.+
T Consensus 5 ~~~~~~~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l 84 (348)
T PRK15181 5 EELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDC 84 (348)
T ss_pred hhhhhcccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHH
Confidence 345677889999999999999999999999999999999999866543322222211 113577889999998887
Q ss_pred HHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC
Q 024752 78 EKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI 157 (263)
Q Consensus 78 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~ 157 (263)
.++++ .+|+|||.|+...... +.++....+++|+.|+.++++++ ++.+..++|++||...+...
T Consensus 85 ~~~~~--------~~d~ViHlAa~~~~~~----~~~~~~~~~~~Nv~gt~nll~~~----~~~~~~~~v~~SS~~vyg~~ 148 (348)
T PRK15181 85 QKACK--------NVDYVLHQAALGSVPR----SLKDPIATNSANIDGFLNMLTAA----RDAHVSSFTYAASSSTYGDH 148 (348)
T ss_pred HHHhh--------CCCEEEECccccCchh----hhhCHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEeechHhhCCC
Confidence 77663 4899999999754322 23344567999999999999988 44455699999997544211
Q ss_pred -----------CCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccccc-chhHHHHHHhHhcCC---
Q 024752 158 -----------PMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKD-SNFLEHANRMVLRTP--- 222 (263)
Q Consensus 158 -----------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~--- 222 (263)
.+...|+.+|.+.+.+++.++.++ |+++..++|+.+..|........ ..+...........+
T Consensus 149 ~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~ 225 (348)
T PRK15181 149 PDLPKIEERIGRPLSPYAVTKYVNELYADVFARSY---EFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYI 225 (348)
T ss_pred CCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEE
Confidence 134579999999999998876554 89999999999998864322111 111111122221111
Q ss_pred ------CCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCccc
Q 024752 223 ------MLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 223 ------~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
...+...+|++++++..+........|+.+++.+|..+
T Consensus 226 ~g~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~yni~~g~~~ 269 (348)
T PRK15181 226 NGDGSTSRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDRT 269 (348)
T ss_pred eCCCCceEeeEEHHHHHHHHHHHHhcccccCCCCEEEecCCCcE
Confidence 12346699999998765543222235889999888654
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.8e-21 Score=166.67 Aligned_cols=192 Identities=14% Similarity=0.099 Sum_probs=146.4
Q ss_pred CCCCEEEEecCCCchHHH--HHHHHHHCCCeEEEeeCCchhH------------HHHHHHHHhcCCceEEEeccCCCHHH
Q 024752 11 LKGMTALVTGGTKGIGYA--VVEELAAFGAIVHTCSRNETEL------------NQRIQEWKSKGLQVSGSVCDLKIRAQ 76 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~--~a~~l~~~g~~V~~~~r~~~~~------------~~~~~~~~~~~~~~~~~~~D~~~~~~ 76 (263)
-.+|++||||+++|||.+ +|+.| +.|++|+++++..+.. +.+.+.+.+.+..+..+.||++++++
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~ 117 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI 117 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 457999999999999999 89999 9999988888543221 23344444556667889999999999
Q ss_pred HHHHHHHHHhhcCCCccEEEeCCCCCCCCC-----------------CC-----------------CCCHHHHHHHHHhh
Q 024752 77 REKLMETVSSQFDGKLNILINNAGTFIPKE-----------------TT-----------------EFTEEDFSTVMTTN 122 (263)
Q Consensus 77 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~-----------------~~-----------------~~~~~~~~~~~~~n 122 (263)
++++++++.+.+ |++|+||||+|...... +. ..+.++++..+.+.
T Consensus 118 v~~lie~I~e~~-G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~vM 196 (398)
T PRK13656 118 KQKVIELIKQDL-GQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVKVM 196 (398)
T ss_pred HHHHHHHHHHhc-CCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHHhh
Confidence 999999999999 89999999999874311 10 12334444444332
Q ss_pred hH-hHHHH--HHHHhHHHhhCCCceEEEEccccccccCCCC--cchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCccc
Q 024752 123 FE-SAYHL--SQLAHPLLKSAGNGNIIFISSVAGVIAIPMC--SIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIR 197 (263)
Q Consensus 123 ~~-~~~~~--~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~--~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~ 197 (263)
-- ..... .+...+.|.+ ++++|..|...+....|.+ +..+.+|++|+..++.++.+|++.|+|+|++.+|.+.
T Consensus 197 ggedw~~Wi~al~~a~lla~--g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~~~ 274 (398)
T PRK13656 197 GGEDWELWIDALDEAGVLAE--GAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKAVV 274 (398)
T ss_pred ccchHHHHHHHHHhcccccC--CcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCccc
Confidence 22 11223 3344455543 6899999999888877776 5899999999999999999999999999999999999
Q ss_pred CCccccccc
Q 024752 198 TPLLDTVEK 206 (263)
Q Consensus 198 t~~~~~~~~ 206 (263)
|.-.+..+.
T Consensus 275 T~Ass~Ip~ 283 (398)
T PRK13656 275 TQASSAIPV 283 (398)
T ss_pred chhhhcCCC
Confidence 987666543
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.1e-21 Score=168.32 Aligned_cols=226 Identities=12% Similarity=0.034 Sum_probs=158.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeE-EEeeCCchhH--HHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIV-HTCSRNETEL--NQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V-~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
|++|||||+|+||+++++.|.++|+.+ ++++|..... ... ..+ ..+.++.++.+|++|.++++++++. .
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~------~ 73 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSL-APV-AQSERFAFEKVDICDRAELARVFTE------H 73 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhh-hhc-ccCCceEEEECCCcChHHHHHHHhh------c
Confidence 689999999999999999999999874 4555543211 111 111 1223577889999999998888764 3
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHh---h--CCCceEEEEccccccc----------
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLK---S--AGNGNIIFISSVAGVI---------- 155 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~--~~~~~iv~vsS~~~~~---------- 155 (263)
++|+|||+||..... .+.++++..+++|+.++.++++++.+.|. + ++..++|++||...+.
T Consensus 74 ~~D~Vih~A~~~~~~----~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~ 149 (355)
T PRK10217 74 QPDCVMHLAAESHVD----RSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFT 149 (355)
T ss_pred CCCEEEECCcccCcc----hhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcC
Confidence 689999999975432 24567789999999999999999987542 1 2235999999965322
Q ss_pred ---cCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcC--C-------C
Q 024752 156 ---AIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRT--P-------M 223 (263)
Q Consensus 156 ---~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--~-------~ 223 (263)
+..+...|+.||.+.+.+++.++.++ ++++..++|+.+..|..... .............. + .
T Consensus 150 E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~---~~~~~~~~~~~~~~~~~~~g~g~~~ 223 (355)
T PRK10217 150 ETTPYAPSSPYSASKASSDHLVRAWLRTY---GLPTLITNCSNNYGPYHFPE---KLIPLMILNALAGKPLPVYGNGQQI 223 (355)
T ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCeEEEeeeeeeCCCCCcc---cHHHHHHHHHhcCCCceEeCCCCee
Confidence 12245679999999999999987775 78999999999988754211 11111111111111 1 2
Q ss_pred CCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCccc
Q 024752 224 LRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 224 ~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
..+..++|+++++..++... ..|+.+++.+|..+
T Consensus 224 ~~~i~v~D~a~a~~~~~~~~---~~~~~yni~~~~~~ 257 (355)
T PRK10217 224 RDWLYVEDHARALYCVATTG---KVGETYNIGGHNER 257 (355)
T ss_pred eCcCcHHHHHHHHHHHHhcC---CCCCeEEeCCCCcc
Confidence 34678999999988776532 24789999998764
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.6e-21 Score=167.68 Aligned_cols=211 Identities=15% Similarity=0.118 Sum_probs=150.3
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc--CCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
..|++|||||+|+||++++++|+++|++|++++|+....+......... ..++.++.+|+++.+.+.++++
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~------- 76 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR------- 76 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------
Confidence 4689999999999999999999999999999999876655443322211 2357888999999988877763
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC----C-------
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI----P------- 158 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~----~------- 158 (263)
.+|+|||+|+..... ..+..++.+++|+.++.++++++.+.. ..++||++||.....+. +
T Consensus 77 -~~d~ViH~A~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~aa~~~~---~~~r~v~~SS~~~~~~~~~~~~~~~E~~~ 147 (351)
T PLN02650 77 -GCTGVFHVATPMDFE-----SKDPENEVIKPTVNGMLSIMKACAKAK---TVRRIVFTSSAGTVNVEEHQKPVYDEDCW 147 (351)
T ss_pred -CCCEEEEeCCCCCCC-----CCCchhhhhhHHHHHHHHHHHHHHhcC---CceEEEEecchhhcccCCCCCCccCcccC
Confidence 479999999864321 112235788999999999999985431 13699999997543211 0
Q ss_pred -----------CCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHh------cC
Q 024752 159 -----------MCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVL------RT 221 (263)
Q Consensus 159 -----------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~------~~ 221 (263)
+...|+.||.+.+.+++.++.++ |++++.++|+.+.+|........ .+......... ..
T Consensus 148 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~Gp~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 223 (351)
T PLN02650 148 SDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAEN---GLDFISIIPTLVVGPFISTSMPP-SLITALSLITGNEAHYSII 223 (351)
T ss_pred CchhhhhccccccchHHHHHHHHHHHHHHHHHHc---CCeEEEECCCceECCCCCCCCCc-cHHHHHHHhcCCccccCcC
Confidence 11369999999999999887764 89999999999999875432111 11111110000 01
Q ss_pred CCCCCCChhhHHHHHHHHcCC
Q 024752 222 PMLRPGEPNEVSSVVAFLCLS 242 (263)
Q Consensus 222 ~~~~~~~~~~va~~~~~l~s~ 242 (263)
....+..++|++++++.++..
T Consensus 224 ~~r~~v~V~Dva~a~~~~l~~ 244 (351)
T PLN02650 224 KQGQFVHLDDLCNAHIFLFEH 244 (351)
T ss_pred CCcceeeHHHHHHHHHHHhcC
Confidence 224678899999999888764
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-20 Score=164.14 Aligned_cols=215 Identities=17% Similarity=0.156 Sum_probs=152.5
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
+.+++++|||||+|+||++++++|+++|++|++++|+....+.+..++.. +.++.++.+|+++.+++.++++
T Consensus 7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~------- 78 (353)
T PLN02896 7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE-GDRLRLFRADLQEEGSFDEAVK------- 78 (353)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc-CCeEEEEECCCCCHHHHHHHHc-------
Confidence 34678999999999999999999999999999999987766555544432 3568889999999988877763
Q ss_pred CCccEEEeCCCCCCCCC-CCCCCHHHH--HHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC---------
Q 024752 90 GKLNILINNAGTFIPKE-TTEFTEEDF--STVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI--------- 157 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~-~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~--------- 157 (263)
.+|+|||+|+...... ....+.+.+ ...++.|+.++.++++++.+.. +.++||++||...+...
T Consensus 79 -~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~---~~~~~v~~SS~~vyg~~~~~~~~~~~ 154 (353)
T PLN02896 79 -GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK---TVKRVVFTSSISTLTAKDSNGRWRAV 154 (353)
T ss_pred -CCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC---CccEEEEEechhhccccccCCCCCCc
Confidence 5899999999765432 122233333 4577888899999999985431 24699999997654311
Q ss_pred ----------------CCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhc-
Q 024752 158 ----------------PMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLR- 220 (263)
Q Consensus 158 ----------------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~- 220 (263)
+....|+.||.+.+.+++.++.++ |+++..++|+.|..|...... .............
T Consensus 155 ~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~--~~~~~~~~~~~~g~ 229 (353)
T PLN02896 155 VDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN---GIDLVSVITTTVAGPFLTPSV--PSSIQVLLSPITGD 229 (353)
T ss_pred cCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCcCCCC--CchHHHHHHHhcCC
Confidence 011379999999999999887665 899999999999998653211 1111111100000
Q ss_pred ---CC----------CCCCCChhhHHHHHHHHcC
Q 024752 221 ---TP----------MLRPGEPNEVSSVVAFLCL 241 (263)
Q Consensus 221 ---~~----------~~~~~~~~~va~~~~~l~s 241 (263)
.+ ...+..++|++++++.++.
T Consensus 230 ~~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~ 263 (353)
T PLN02896 230 SKLFSILSAVNSRMGSIALVHIEDICDAHIFLME 263 (353)
T ss_pred ccccccccccccccCceeEEeHHHHHHHHHHHHh
Confidence 00 1245789999999987765
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.8e-21 Score=164.64 Aligned_cols=219 Identities=15% Similarity=0.128 Sum_probs=153.8
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHH-HHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQ-RIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
+++|+++||||+|+||++++++|+++|++|++++|+.+.... ...++.....++.++.+|+++.+++.++++
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 80 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID------- 80 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh-------
Confidence 568999999999999999999999999999999998764322 122332222357888999999998887764
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC----C-------
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI----P------- 158 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~----~------- 158 (263)
.+|+|||+|+... +++.+.+++|+.++.++++++. +.+.++||++||..+..+. +
T Consensus 81 -~~d~Vih~A~~~~---------~~~~~~~~~nv~gt~~ll~aa~----~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~ 146 (342)
T PLN02214 81 -GCDGVFHTASPVT---------DDPEQMVEPAVNGAKFVINAAA----EAKVKRVVITSSIGAVYMDPNRDPEAVVDES 146 (342)
T ss_pred -cCCEEEEecCCCC---------CCHHHHHHHHHHHHHHHHHHHH----hcCCCEEEEeccceeeeccCCCCCCcccCcc
Confidence 5899999999641 2356789999999999999984 3445699999997543321 0
Q ss_pred ----------CCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcC-----CC
Q 024752 159 ----------MCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRT-----PM 223 (263)
Q Consensus 159 ----------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-----~~ 223 (263)
....|+.||.+.+.+++.++.++ |+++..++|+.|..|....... .............. ..
T Consensus 147 ~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---g~~~v~lRp~~vyGp~~~~~~~-~~~~~~~~~~~g~~~~~~~~~ 222 (342)
T PLN02214 147 CWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEK---GVDLVVLNPVLVLGPPLQPTIN-ASLYHVLKYLTGSAKTYANLT 222 (342)
T ss_pred cCCChhhccccccHHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCCCCCC-chHHHHHHHHcCCcccCCCCC
Confidence 12369999999999998887665 8999999999999886432111 11111011111111 11
Q ss_pred CCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCC
Q 024752 224 LRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGG 257 (263)
Q Consensus 224 ~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG 257 (263)
..+.+++|++++++.++.... .|..+++.++
T Consensus 223 ~~~i~V~Dva~a~~~al~~~~---~~g~yn~~~~ 253 (342)
T PLN02214 223 QAYVDVRDVALAHVLVYEAPS---ASGRYLLAES 253 (342)
T ss_pred cCeeEHHHHHHHHHHHHhCcc---cCCcEEEecC
Confidence 246789999999887664321 2345666543
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.4e-20 Score=161.70 Aligned_cols=211 Identities=18% Similarity=0.131 Sum_probs=148.4
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHH--HHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQ--EWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
+++|+++||||+|+||+++++.|+++|++|+++.|+......... .+.. ..++.++.+|+++++++.++++
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~------ 79 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQE-LGDLKIFGADLTDEESFEAPIA------ 79 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCC-CCceEEEEcCCCChHHHHHHHh------
Confidence 558999999999999999999999999999988888654432221 1111 1257888999999988877663
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc------------
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA------------ 156 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~------------ 156 (263)
++|+|||+|+.... . ..+.+...+++|+.++.++++++.+. .+.+++|++||.+.+..
T Consensus 80 --~~d~vih~A~~~~~---~--~~~~~~~~~~~nv~g~~~ll~a~~~~---~~~~~~v~~SS~~~~g~~~~~~~~~~~~E 149 (338)
T PLN00198 80 --GCDLVFHVATPVNF---A--SEDPENDMIKPAIQGVHNVLKACAKA---KSVKRVILTSSAAAVSINKLSGTGLVMNE 149 (338)
T ss_pred --cCCEEEEeCCCCcc---C--CCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeecceeeeccCCCCCCceecc
Confidence 57999999985321 1 12334567899999999999998442 23579999999765431
Q ss_pred ------------CCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHh-----
Q 024752 157 ------------IPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVL----- 219 (263)
Q Consensus 157 ------------~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~----- 219 (263)
.++...|+.||.+.+.+++.++.++ |++++.++|+.|..|....... ...........
T Consensus 150 ~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~R~~~vyGp~~~~~~~--~~~~~~~~~~~~~~~~ 224 (338)
T PLN00198 150 KNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEEN---NIDLITVIPTLMAGPSLTSDIP--SSLSLAMSLITGNEFL 224 (338)
T ss_pred ccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHhc---CceEEEEeCCceECCCccCCCC--CcHHHHHHHHcCCccc
Confidence 1234569999999999999887654 8999999999999986432111 10000001000
Q ss_pred -----cCC----CCCCCChhhHHHHHHHHcCCC
Q 024752 220 -----RTP----MLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 220 -----~~~----~~~~~~~~~va~~~~~l~s~~ 243 (263)
..+ ...+..++|++++++.++...
T Consensus 225 ~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~~ 257 (338)
T PLN00198 225 INGLKGMQMLSGSISITHVEDVCRAHIFLAEKE 257 (338)
T ss_pred cccccccccccCCcceeEHHHHHHHHHHHhhCc
Confidence 011 135688999999998877543
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.6e-20 Score=166.52 Aligned_cols=233 Identities=14% Similarity=0.099 Sum_probs=158.5
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhH----------------HHHHHHHH-hcCCceEEEecc
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETEL----------------NQRIQEWK-SKGLQVSGSVCD 70 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~----------------~~~~~~~~-~~~~~~~~~~~D 70 (263)
+-++++|++|||||+|+||++++++|+++|++|++++|..... .+..+.+. ..+.++.++.+|
T Consensus 42 ~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 121 (442)
T PLN02572 42 SSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGD 121 (442)
T ss_pred CccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECC
Confidence 3458899999999999999999999999999999987532110 01111111 113357889999
Q ss_pred CCCHHHHHHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCC-ceEEEEc
Q 024752 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGN-GNIIFIS 149 (263)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~iv~vs 149 (263)
++|.+++.++++. .++|+|||+|+.... +....+.++++..+++|+.|++++++++.. .+. .++|++|
T Consensus 122 l~d~~~v~~~l~~------~~~D~ViHlAa~~~~-~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~----~gv~~~~V~~S 190 (442)
T PLN02572 122 ICDFEFLSEAFKS------FEPDAVVHFGEQRSA-PYSMIDRSRAVFTQHNNVIGTLNVLFAIKE----FAPDCHLVKLG 190 (442)
T ss_pred CCCHHHHHHHHHh------CCCCEEEECCCcccC-hhhhcChhhHHHHHHHHHHHHHHHHHHHHH----hCCCccEEEEe
Confidence 9999999888874 268999999976432 233345566788899999999999999844 232 4899999
Q ss_pred ccccccc------------------------CCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccc
Q 024752 150 SVAGVIA------------------------IPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVE 205 (263)
Q Consensus 150 S~~~~~~------------------------~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~ 205 (263)
|...+.. ..+...|+.||.+.+.+++.++..+ |+.+..++|+.++.|......
T Consensus 191 S~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~---gl~~v~lR~~~vyGp~~~~~~ 267 (442)
T PLN02572 191 TMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETM 267 (442)
T ss_pred cceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhc---CCCEEEEecccccCCCCcccc
Confidence 9764421 1123579999999999998876654 899999999999988643210
Q ss_pred c----------c----chhHHHHHHhHhcCC---------CCCCCChhhHHHHHHHHcCCCCCCccC--cEEEeCC
Q 024752 206 K----------D----SNFLEHANRMVLRTP---------MLRPGEPNEVSSVVAFLCLSATSYVTG--QVICVDG 256 (263)
Q Consensus 206 ~----------~----~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~~~l~s~~~~~~~G--~~i~~dg 256 (263)
. . ........+.....+ ...+..++|++++++.++.... ..| ..+++++
T Consensus 268 ~~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~--~~g~~~i~Nigs 341 (442)
T PLN02572 268 MDEELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPA--KPGEFRVFNQFT 341 (442)
T ss_pred cccccccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChh--hcCceeEEEeCC
Confidence 0 0 001111111111111 1246779999999987765321 134 4677754
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.9e-20 Score=161.91 Aligned_cols=237 Identities=15% Similarity=0.147 Sum_probs=159.3
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHH----hcCCceEEEeccCCCHHHHHHHHHHH
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWK----SKGLQVSGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~~~ 84 (263)
|++++|+++||||+|+||++++++|+++|++|++++|...........+. ..+.++.++.+|+++++++.++++.
T Consensus 1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~- 79 (352)
T PLN02240 1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAS- 79 (352)
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHh-
Confidence 56889999999999999999999999999999999875433222222221 1234578889999999999888764
Q ss_pred HhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc--------
Q 024752 85 SSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA-------- 156 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-------- 156 (263)
..+|+|||+|+...... +.+++.+.+++|+.++.++++++ ++.+.+++|++||...+..
T Consensus 80 -----~~~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~E 146 (352)
T PLN02240 80 -----TRFDAVIHFAGLKAVGE----SVAKPLLYYDNNLVGTINLLEVM----AKHGCKKLVFSSSATVYGQPEEVPCTE 146 (352)
T ss_pred -----CCCCEEEEccccCCccc----cccCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEccHHHhCCCCCCCCCC
Confidence 36899999999754322 34567889999999999999876 4444579999999643321
Q ss_pred ---CCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccc-cc-----cchhHHHHHHhHh-cC-----
Q 024752 157 ---IPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTV-EK-----DSNFLEHANRMVL-RT----- 221 (263)
Q Consensus 157 ---~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~-~~-----~~~~~~~~~~~~~-~~----- 221 (263)
..+...|+.+|.+.+.+++.++.+ ..++++..++|+.+..+..... .. ...+......... ..
T Consensus 147 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (352)
T PLN02240 147 EFPLSATNPYGRTKLFIEEICRDIHAS--DPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTV 224 (352)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHh--cCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEE
Confidence 123567999999999999988754 2367888888776655321100 00 0111111111111 00
Q ss_pred -----------CCCCCCChhhHHHHHHHHcCCC--CCCccCcEEEeCCCcccc
Q 024752 222 -----------PMLRPGEPNEVSSVVAFLCLSA--TSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 222 -----------~~~~~~~~~~va~~~~~l~s~~--~~~~~G~~i~~dgG~~~~ 261 (263)
....+..++|++++++.++... .....|+.+++.+|..++
T Consensus 225 ~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s 277 (352)
T PLN02240 225 FGNDYPTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTS 277 (352)
T ss_pred eCCCCCCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEe
Confidence 1123466899999877655321 122457899999887654
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.1e-20 Score=161.31 Aligned_cols=230 Identities=14% Similarity=0.033 Sum_probs=149.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchh-----HHHHHHHHH-hcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-----LNQRIQEWK-SKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~-----~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
|++|||||+|+||++++++|+++|++|++++|+... .+.+..+.. ..+..+.++.+|++|.+++.++++..
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~--- 77 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI--- 77 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence 689999999999999999999999999999998642 111111110 01235788999999999998888742
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc-----------
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA----------- 156 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~----------- 156 (263)
++|+|||+|+...... +.+.-...+++|+.++.++++++.+.-.+ +..++|++||...+..
T Consensus 78 ---~~d~ViH~Aa~~~~~~----~~~~~~~~~~~n~~gt~~ll~a~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~E~~~ 149 (343)
T TIGR01472 78 ---KPTEIYNLAAQSHVKV----SFEIPEYTADVDGIGTLRLLEAVRTLGLI-KSVKFYQASTSELYGKVQEIPQNETTP 149 (343)
T ss_pred ---CCCEEEECCcccccch----hhhChHHHHHHHHHHHHHHHHHHHHhCCC-cCeeEEEeccHHhhCCCCCCCCCCCCC
Confidence 5899999999765422 22334567889999999999998653111 1248999999754321
Q ss_pred CCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHh----------cCCCCCC
Q 024752 157 IPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVL----------RTPMLRP 226 (263)
Q Consensus 157 ~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~ 226 (263)
..+...|+.||.+.+.+++.++.++ |+.+....+..+..|..........+.....+... ......+
T Consensus 150 ~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~ 226 (343)
T TIGR01472 150 FYPRSPYAAAKLYAHWITVNYREAY---GLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDW 226 (343)
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHh---CCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCc
Confidence 1245679999999999999988776 44443333333333321110000111111111111 1123456
Q ss_pred CChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 227 GEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 227 ~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
...+|++++++.++.... +..+++.+|..++
T Consensus 227 i~V~D~a~a~~~~~~~~~----~~~yni~~g~~~s 257 (343)
T TIGR01472 227 GHAKDYVEAMWLMLQQDK----PDDYVIATGETHS 257 (343)
T ss_pred eeHHHHHHHHHHHHhcCC----CccEEecCCCcee
Confidence 789999999887664321 3579998886543
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=9e-21 Score=147.77 Aligned_cols=145 Identities=19% Similarity=0.215 Sum_probs=121.4
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
..|++++|+++||||++|||+++++.|++.|++|++++|+.+..++..+++...+.++.++.+|+++.+++.++++++.+
T Consensus 10 ~~~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~ 89 (169)
T PRK06720 10 MKMKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLN 89 (169)
T ss_pred cccccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 35778999999999999999999999999999999999998888887788776566778889999999999999999998
Q ss_pred hcCCCccEEEeCCCCCCCC-CCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-------CceEEEEccccccc
Q 024752 87 QFDGKLNILINNAGTFIPK-ETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-------NGNIIFISSVAGVI 155 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-------~~~iv~vsS~~~~~ 155 (263)
.+ +++|++|||||+.... ++.+.+.++ ++ .+|+.+.+..++.+.+.|.+++ .||+..|||.+..+
T Consensus 90 ~~-G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (169)
T PRK06720 90 AF-SRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQSF 162 (169)
T ss_pred Hc-CCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccccc
Confidence 88 8999999999987754 444445444 44 7777788889999999987653 57888888876543
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.9e-20 Score=158.35 Aligned_cols=220 Identities=12% Similarity=0.045 Sum_probs=151.1
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchh--HHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE--LNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
++=++|+++||||+|+||++++++|+++|++|+++.|+... ..+...++...+.++.++.+|+++.+++.+++
T Consensus 2 ~~~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l----- 76 (297)
T PLN02583 2 FDESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDAL----- 76 (297)
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHH-----
Confidence 44568999999999999999999999999999999986432 22233333222346788899999999887665
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC-C-------
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI-P------- 158 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-~------- 158 (263)
...|.++|.++.... .+ +++++.+++|+.+++++++++.+.+ +.++||++||..+.... +
T Consensus 77 ---~~~d~v~~~~~~~~~-----~~-~~~~~~~~~nv~gt~~ll~aa~~~~---~v~riV~~SS~~a~~~~~~~~~~~~~ 144 (297)
T PLN02583 77 ---KGCSGLFCCFDPPSD-----YP-SYDEKMVDVEVRAAHNVLEACAQTD---TIEKVVFTSSLTAVIWRDDNISTQKD 144 (297)
T ss_pred ---cCCCEEEEeCccCCc-----cc-ccHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEecchHheecccccCCCCCC
Confidence 357888887653211 11 2467899999999999999996653 24799999998664211 0
Q ss_pred ------C--------CcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCC--
Q 024752 159 ------M--------CSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTP-- 222 (263)
Q Consensus 159 ------~--------~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-- 222 (263)
. ...|+.||...+.+++.++++. |+++++|+|++|.+|....... .. .......+
T Consensus 145 ~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---gi~~v~lrp~~v~Gp~~~~~~~---~~---~~~~~~~~~~ 215 (297)
T PLN02583 145 VDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMDR---GVNMVSINAGLLMGPSLTQHNP---YL---KGAAQMYENG 215 (297)
T ss_pred CCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHHh---CCcEEEEcCCcccCCCCCCchh---hh---cCCcccCccc
Confidence 0 0159999999999998876553 8999999999999886532110 00 00000011
Q ss_pred CCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCC
Q 024752 223 MLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGG 257 (263)
Q Consensus 223 ~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG 257 (263)
...+.+++|+|++++..+... ...| .+.+.++
T Consensus 216 ~~~~v~V~Dva~a~~~al~~~--~~~~-r~~~~~~ 247 (297)
T PLN02583 216 VLVTVDVNFLVDAHIRAFEDV--SSYG-RYLCFNH 247 (297)
T ss_pred CcceEEHHHHHHHHHHHhcCc--ccCC-cEEEecC
Confidence 123678999999987766432 2234 4555444
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.1e-20 Score=158.47 Aligned_cols=210 Identities=16% Similarity=0.135 Sum_probs=146.4
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHH--hcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWK--SKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
++|++|||||+|+||++++++|+++|++|++++|+............ ....++.++.+|+++++++.++++
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 75 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD------- 75 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc-------
Confidence 57899999999999999999999999999999998765432222111 112467889999999988777763
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccc-c-cC----------
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGV-I-AI---------- 157 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~-~-~~---------- 157 (263)
.+|+|||+|+...... .+...+.+++|+.++.++++++.... +..++|++||..+. . +.
T Consensus 76 -~~d~Vih~A~~~~~~~-----~~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~v~~SS~~~~~y~~~~~~~~~~~~E 146 (322)
T PLN02662 76 -GCEGVFHTASPFYHDV-----TDPQAELIDPAVKGTLNVLRSCAKVP---SVKRVVVTSSMAAVAYNGKPLTPDVVVDE 146 (322)
T ss_pred -CCCEEEEeCCcccCCC-----CChHHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEccCHHHhcCCCcCCCCCCcCCc
Confidence 5799999999653211 11225789999999999999984321 34699999997532 1 11
Q ss_pred -----CC-----CcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHh---cCC--
Q 024752 158 -----PM-----CSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVL---RTP-- 222 (263)
Q Consensus 158 -----~~-----~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---~~~-- 222 (263)
|. ...|+.+|.+.+.+++.+..++ |++++.++|+.+.+|....... .......+... ..+
T Consensus 147 ~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lRp~~v~Gp~~~~~~~--~~~~~~~~~~~~~~~~~~~ 221 (322)
T PLN02662 147 TWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKEN---GIDMVTINPAMVIGPLLQPTLN--TSAEAILNLINGAQTFPNA 221 (322)
T ss_pred ccCCChhHhhcccchHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCcccCCCCCCCCC--chHHHHHHHhcCCccCCCC
Confidence 10 1369999999999988776554 8999999999999986533211 00111111111 111
Q ss_pred CCCCCChhhHHHHHHHHcCC
Q 024752 223 MLRPGEPNEVSSVVAFLCLS 242 (263)
Q Consensus 223 ~~~~~~~~~va~~~~~l~s~ 242 (263)
...+..++|++++++.++..
T Consensus 222 ~~~~i~v~Dva~a~~~~~~~ 241 (322)
T PLN02662 222 SYRWVDVRDVANAHIQAFEI 241 (322)
T ss_pred CcCeEEHHHHHHHHHHHhcC
Confidence 23568899999999877654
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.5e-20 Score=157.09 Aligned_cols=224 Identities=14% Similarity=0.061 Sum_probs=155.5
Q ss_pred EEEEecCCCchHHHHHHHHHHCC--CeEEEeeCCchh-HHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 15 TALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETE-LNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g--~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
+++||||+|+||++++++|++.| .+|++++|.... ..+....+.. ..++.++.+|+++++++.++++. .+
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~------~~ 73 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED-NPRYRFVKGDIGDRELVSRLFTE------HQ 73 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc-CCCcEEEEcCCcCHHHHHHHHhh------cC
Confidence 48999999999999999999987 689888774321 1111122211 23577889999999999888763 25
Q ss_pred ccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc------------CCC
Q 024752 92 LNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA------------IPM 159 (263)
Q Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~------------~~~ 159 (263)
+|+|||+|+..... .+.+.++..+++|+.++.++++++.+.+. +.++|++||...+.. ..+
T Consensus 74 ~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~ 146 (317)
T TIGR01181 74 PDAVVHFAAESHVD----RSISGPAAFIETNVVGTYTLLEAVRKYWH---EFRFHHISTDEVYGDLEKGDAFTETTPLAP 146 (317)
T ss_pred CCEEEEcccccCch----hhhhCHHHHHHHHHHHHHHHHHHHHhcCC---CceEEEeeccceeCCCCCCCCcCCCCCCCC
Confidence 89999999976432 24456778899999999999998854322 358999998653321 113
Q ss_pred CcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCC---------CCCCCChh
Q 024752 160 CSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTP---------MLRPGEPN 230 (263)
Q Consensus 160 ~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~ 230 (263)
...|+.+|.+.+.+++.++.++ ++++..++|+.+..+...... .............+ ...+..++
T Consensus 147 ~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~i~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 220 (317)
T TIGR01181 147 SSPYSASKAASDHLVRAYHRTY---GLPALITRCSNNYGPYQFPEK---LIPLMITNALAGKPLPVYGDGQQVRDWLYVE 220 (317)
T ss_pred CCchHHHHHHHHHHHHHHHHHh---CCCeEEEEeccccCCCCCccc---HHHHHHHHHhcCCCceEeCCCceEEeeEEHH
Confidence 4579999999999999887765 799999999999877532211 11111122221111 11355689
Q ss_pred hHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 231 EVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 231 ~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
|+++++..++... ..|+.+++.++..++
T Consensus 221 D~a~~~~~~~~~~---~~~~~~~~~~~~~~s 248 (317)
T TIGR01181 221 DHCRAIYLVLEKG---RVGETYNIGGGNERT 248 (317)
T ss_pred HHHHHHHHHHcCC---CCCceEEeCCCCcee
Confidence 9999998877543 357899998886554
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1e-19 Score=158.59 Aligned_cols=225 Identities=14% Similarity=0.058 Sum_probs=154.6
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCe-EEEeeCCch--hHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGAI-VHTCSRNET--ELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~~-V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
++|||||+|+||++++++|+++|+. |+.+++... ..+.. ..+. .+.++.++.+|++|.+++.+++++ .+
T Consensus 2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~------~~ 73 (352)
T PRK10084 2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESL-ADVS-DSERYVFEHADICDRAELDRIFAQ------HQ 73 (352)
T ss_pred eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHH-Hhcc-cCCceEEEEecCCCHHHHHHHHHh------cC
Confidence 6899999999999999999999976 555665431 11111 1111 123577789999999999888864 36
Q ss_pred ccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-----CCceEEEEcccccccc----------
Q 024752 92 LNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-----GNGNIIFISSVAGVIA---------- 156 (263)
Q Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~vsS~~~~~~---------- 156 (263)
+|+|||+|+...... +.+..++.+++|+.++.++++++.+.|.+. +..++|++||...+..
T Consensus 74 ~d~vih~A~~~~~~~----~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 149 (352)
T PRK10084 74 PDAVMHLAAESHVDR----SITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENS 149 (352)
T ss_pred CCEEEECCcccCCcc----hhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcccccccc
Confidence 999999999754322 223456789999999999999998876421 2358999999653321
Q ss_pred -----------CCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcC--C-
Q 024752 157 -----------IPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRT--P- 222 (263)
Q Consensus 157 -----------~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--~- 222 (263)
..+...|+.||.+.+.+++.++.++ |+++..+.|+.+..|..... .............. +
T Consensus 150 ~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~vilr~~~v~Gp~~~~~---~~~~~~~~~~~~~~~~~~ 223 (352)
T PRK10084 150 EELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY---GLPTIVTNCSNNYGPYHFPE---KLIPLVILNALEGKPLPI 223 (352)
T ss_pred ccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeccceeCCCcCcc---chHHHHHHHHhcCCCeEE
Confidence 1234679999999999999988775 77888889998887753211 01111111111111 1
Q ss_pred ------CCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCccc
Q 024752 223 ------MLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 223 ------~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
...+..++|+++++..++... ..|+.+++.++..+
T Consensus 224 ~~~g~~~~~~v~v~D~a~a~~~~l~~~---~~~~~yni~~~~~~ 264 (352)
T PRK10084 224 YGKGDQIRDWLYVEDHARALYKVVTEG---KAGETYNIGGHNEK 264 (352)
T ss_pred eCCCCeEEeeEEHHHHHHHHHHHHhcC---CCCceEEeCCCCcC
Confidence 123567999999998776532 24789999888654
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.8e-19 Score=154.88 Aligned_cols=231 Identities=15% Similarity=0.082 Sum_probs=154.5
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHh-cCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS-KGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
+++||||+|+||+++++.|+++|++|++++|...........+.. .+.++.++.+|+++.+++.++++. .++|
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~------~~~d 75 (338)
T PRK10675 2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD------HAID 75 (338)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc------CCCC
Confidence 699999999999999999999999999988754433332222222 233567788999999988887753 3699
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC------------CCCc
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI------------PMCS 161 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~------------~~~~ 161 (263)
++||+|+...... ..+.....+++|+.++.++++++ ++.+.+++|++||...+... .+..
T Consensus 76 ~vvh~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~ 147 (338)
T PRK10675 76 TVIHFAGLKAVGE----SVQKPLEYYDNNVNGTLRLISAM----RAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQS 147 (338)
T ss_pred EEEECCccccccc----hhhCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCC
Confidence 9999999764322 22345668899999999998876 55556799999997543210 2357
Q ss_pred chhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccc-c-----cchhHHHHHHhHh-c----------CC--
Q 024752 162 IYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVE-K-----DSNFLEHANRMVL-R----------TP-- 222 (263)
Q Consensus 162 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~-~-----~~~~~~~~~~~~~-~----------~~-- 222 (263)
.|+.+|.+.+.+++.++.+. .++++..++|+.+..+...... . ...+.....+... . .|
T Consensus 148 ~Y~~sK~~~E~~~~~~~~~~--~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (338)
T PRK10675 148 PYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTE 225 (338)
T ss_pred hhHHHHHHHHHHHHHHHHhc--CCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCC
Confidence 89999999999999986553 2578888887777665321110 0 0111111111111 0 01
Q ss_pred C----CCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 223 M----LRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 223 ~----~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
. ..+...+|++++++.++........|+.+++.+|..++
T Consensus 226 ~g~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s 268 (338)
T PRK10675 226 DGTGVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSS 268 (338)
T ss_pred CCcEEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCcee
Confidence 1 23577999999987665432122336899998887554
|
|
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.7e-19 Score=148.46 Aligned_cols=227 Identities=17% Similarity=0.147 Sum_probs=164.6
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHH--HHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQ--RIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
.+++|+||||+|.||++++++|+++|++|..+.|+++..+. .+.+++..+.+...+.+|++++++++++++
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~------- 77 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID------- 77 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh-------
Confidence 68999999999999999999999999999999999988544 355555556668899999999999999985
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC-CCC--------
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI-PMC-------- 160 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-~~~-------- 160 (263)
..|+|+|.|........ + .-.+.++..+.|+.++++++... +.-.|||+.||.++.... +..
T Consensus 78 -gcdgVfH~Asp~~~~~~---~--~e~~li~pav~Gt~nVL~ac~~~---~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE 148 (327)
T KOG1502|consen 78 -GCDGVFHTASPVDFDLE---D--PEKELIDPAVKGTKNVLEACKKT---KSVKRVVYTSSTAAVRYNGPNIGENSVVDE 148 (327)
T ss_pred -CCCEEEEeCccCCCCCC---C--cHHhhhhHHHHHHHHHHHHHhcc---CCcceEEEeccHHHhccCCcCCCCCccccc
Confidence 48999999997654321 1 22378999999999999999432 125799999999987643 111
Q ss_pred -------------cchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhH--HHHHHhHhcCCC--
Q 024752 161 -------------SIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFL--EHANRMVLRTPM-- 223 (263)
Q Consensus 161 -------------~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~--~~~~~~~~~~~~-- 223 (263)
..|..||...|..+..++.|. |+...+|+|+.|-.|............ +.........+-
T Consensus 149 ~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~---~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~ 225 (327)
T KOG1502|consen 149 ESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKEN---GLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFW 225 (327)
T ss_pred ccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHhC---CccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCc
Confidence 248888877776666666554 799999999999999876632221111 111111111111
Q ss_pred CCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCcc
Q 024752 224 LRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYS 259 (263)
Q Consensus 224 ~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~ 259 (263)
..+.+.+|||.+.+++...... .|+.|.++...+
T Consensus 226 ~~~VdVrDVA~AHv~a~E~~~a--~GRyic~~~~~~ 259 (327)
T KOG1502|consen 226 LAFVDVRDVALAHVLALEKPSA--KGRYICVGEVVS 259 (327)
T ss_pred eeeEeHHHHHHHHHHHHcCccc--CceEEEecCccc
Confidence 1257899999998877754332 488887766543
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.8e-19 Score=145.82 Aligned_cols=224 Identities=15% Similarity=0.073 Sum_probs=164.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchh-HHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETE-LNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
+++|||||+|+||+++++.+.+... +|+.++.-.-. -.+..+.+. ...+..+++.|+.|.+.+.+++++ .
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~-~~~~~~fv~~DI~D~~~v~~~~~~------~ 73 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVE-DSPRYRFVQGDICDRELVDRLFKE------Y 73 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhh-cCCCceEEeccccCHHHHHHHHHh------c
Confidence 5789999999999999999988765 46777763211 111222222 235689999999999988888864 3
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccc-------------cC
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVI-------------AI 157 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-------------~~ 157 (263)
++|+++|-|+-++... +.++....+++|++|++.+++++..+..+ -|++.||+...+- +.
T Consensus 74 ~~D~VvhfAAESHVDR----SI~~P~~Fi~TNv~GT~~LLEaar~~~~~---frf~HISTDEVYG~l~~~~~~FtE~tp~ 146 (340)
T COG1088 74 QPDAVVHFAAESHVDR----SIDGPAPFIQTNVVGTYTLLEAARKYWGK---FRFHHISTDEVYGDLGLDDDAFTETTPY 146 (340)
T ss_pred CCCeEEEechhccccc----cccChhhhhhcchHHHHHHHHHHHHhccc---ceEEEeccccccccccCCCCCcccCCCC
Confidence 7999999999887654 66777888999999999999999554322 4899999865432 34
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCC---------CCCCC
Q 024752 158 PMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPM---------LRPGE 228 (263)
Q Consensus 158 ~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~ 228 (263)
.+.++|++|||+-+.|++++.+.| |+.++..++..-+.|..... +-++....+.....|+ +.|..
T Consensus 147 ~PsSPYSASKAasD~lVray~~TY---glp~~ItrcSNNYGPyqfpE---KlIP~~I~nal~g~~lpvYGdG~~iRDWl~ 220 (340)
T COG1088 147 NPSSPYSASKAASDLLVRAYVRTY---GLPATITRCSNNYGPYQFPE---KLIPLMIINALLGKPLPVYGDGLQIRDWLY 220 (340)
T ss_pred CCCCCcchhhhhHHHHHHHHHHHc---CCceEEecCCCCcCCCcCch---hhhHHHHHHHHcCCCCceecCCcceeeeEE
Confidence 567889999999999999998887 89999888887777765432 1222222333333332 34566
Q ss_pred hhhHHHHHHHHcCCCCCCccCcEEEeCCCccc
Q 024752 229 PNEVSSVVAFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 229 ~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
++|=+.++..++..... |+++|++||.-.
T Consensus 221 VeDh~~ai~~Vl~kg~~---GE~YNIgg~~E~ 249 (340)
T COG1088 221 VEDHCRAIDLVLTKGKI---GETYNIGGGNER 249 (340)
T ss_pred eHhHHHHHHHHHhcCcC---CceEEeCCCccc
Confidence 89999998877765543 999999998643
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.85 E-value=2e-19 Score=157.50 Aligned_cols=213 Identities=12% Similarity=0.087 Sum_probs=146.5
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc------CCceEEEeccCCCHHHHHHHH
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK------GLQVSGSVCDLKIRAQREKLM 81 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~ 81 (263)
..+.++|++|||||+|+||++++++|+++|++|+++.|+.+..+.+ +++... ...+.++.+|+++.+++.+++
T Consensus 48 ~~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i 126 (367)
T PLN02686 48 GADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAF 126 (367)
T ss_pred ccCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHH
Confidence 5578899999999999999999999999999999988887655443 232211 124778899999999988877
Q ss_pred HHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-CCceEEEEccccc-ccc---
Q 024752 82 ETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-GNGNIIFISSVAG-VIA--- 156 (263)
Q Consensus 82 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~-~~~--- 156 (263)
+ .+|.+||.|+......... ......++|+.++.++++++ ++. +-.++|++||..+ .++
T Consensus 127 ~--------~~d~V~hlA~~~~~~~~~~----~~~~~~~~nv~gt~~llea~----~~~~~v~r~V~~SS~~~~vyg~~~ 190 (367)
T PLN02686 127 D--------GCAGVFHTSAFVDPAGLSG----YTKSMAELEAKASENVIEAC----VRTESVRKCVFTSSLLACVWRQNY 190 (367)
T ss_pred H--------hccEEEecCeeeccccccc----ccchhhhhhHHHHHHHHHHH----HhcCCccEEEEeccHHHhcccccC
Confidence 4 3689999998764432111 11244678999999999987 332 3569999999631 110
Q ss_pred -----C--------------CCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHh
Q 024752 157 -----I--------------PMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRM 217 (263)
Q Consensus 157 -----~--------------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~ 217 (263)
. .+...|+.||.+.+.+++.++.+ .|++++.++|+.|++|........ .........
T Consensus 191 ~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~gl~~v~lRp~~vyGp~~~~~~~~-~~~~~~~g~ 266 (367)
T PLN02686 191 PHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KGLKLATICPALVTGPGFFRRNST-ATIAYLKGA 266 (367)
T ss_pred CCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cCceEEEEcCCceECCCCCCCCCh-hHHHHhcCC
Confidence 0 01236999999999999987765 489999999999999864321111 111111110
Q ss_pred HhcCCC--CCCCChhhHHHHHHHHcC
Q 024752 218 VLRTPM--LRPGEPNEVSSVVAFLCL 241 (263)
Q Consensus 218 ~~~~~~--~~~~~~~~va~~~~~l~s 241 (263)
....+. ..+.+++|++++++.++.
T Consensus 267 ~~~~g~g~~~~v~V~Dva~A~~~al~ 292 (367)
T PLN02686 267 QEMLADGLLATADVERLAEAHVCVYE 292 (367)
T ss_pred CccCCCCCcCeEEHHHHHHHHHHHHh
Confidence 001111 136779999999876664
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.8e-19 Score=156.22 Aligned_cols=226 Identities=21% Similarity=0.187 Sum_probs=178.6
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhc--CCceEEEeccCCCHHHHHHHHHHHH
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSK--GLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
-.++||++|||||+|.||+++++++++.+. ++++.+|++.+......++... ..+..++-+|+.|.+.+..++..
T Consensus 246 ~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~-- 323 (588)
T COG1086 246 AMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEG-- 323 (588)
T ss_pred hHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhc--
Confidence 348899999999999999999999999987 6999999999999998888864 46788899999999999998873
Q ss_pred hhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhh
Q 024752 86 SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYAS 165 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~ 165 (263)
-++|+++|.|+.-+.+.. +....+.+.+|++|+.++++++ .+.+-.++|.+|+.-+..| ...|++
T Consensus 324 ----~kvd~VfHAAA~KHVPl~----E~nP~Eai~tNV~GT~nv~~aa----~~~~V~~~V~iSTDKAV~P---tNvmGa 388 (588)
T COG1086 324 ----HKVDIVFHAAALKHVPLV----EYNPEEAIKTNVLGTENVAEAA----IKNGVKKFVLISTDKAVNP---TNVMGA 388 (588)
T ss_pred ----CCCceEEEhhhhccCcch----hcCHHHHHHHhhHhHHHHHHHH----HHhCCCEEEEEecCcccCC---chHhhH
Confidence 489999999998776543 3456778999999999999999 5666789999999877755 467999
Q ss_pred HHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCC--------CCCCChhhHHHHHH
Q 024752 166 SKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPM--------LRPGEPNEVSSVVA 237 (263)
Q Consensus 166 sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~va~~~~ 237 (263)
||...|.++++++.+....+.++..++-|.|-....+-.+. +. .+..+.-|. +-+.+..|.++.++
T Consensus 389 TKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViPl---Fk---~QI~~GgplTvTdp~mtRyfMTI~EAv~LVl 462 (588)
T COG1086 389 TKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIPL---FK---KQIAEGGPLTVTDPDMTRFFMTIPEAVQLVL 462 (588)
T ss_pred HHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCCHHH---HH---HHHHcCCCccccCCCceeEEEEHHHHHHHHH
Confidence 99999999999988777667899999999997654332211 11 222222221 22456788888877
Q ss_pred HHcCCCCCCccCcEEEeCCCccc
Q 024752 238 FLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 238 ~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
.-.... -+|+.+.+|-|.++
T Consensus 463 qA~a~~---~gGeifvldMGepv 482 (588)
T COG1086 463 QAGAIA---KGGEIFVLDMGEPV 482 (588)
T ss_pred HHHhhc---CCCcEEEEcCCCCe
Confidence 655433 36999999998765
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.2e-19 Score=154.80 Aligned_cols=226 Identities=16% Similarity=0.175 Sum_probs=151.3
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHC-CCeEEEeeCCchhHHHHHHHHH-hcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAF-GAIVHTCSRNETELNQRIQEWK-SKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~-g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
++.++||||||+|+||++++++|+++ |++|++++|+......+..... ....++.++.+|++|.+++.++++
T Consensus 12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~------ 85 (386)
T PLN02427 12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK------ 85 (386)
T ss_pred ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh------
Confidence 44568999999999999999999998 5899999988665433321100 012358899999999988877663
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC---------C-
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI---------P- 158 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~---------~- 158 (263)
.+|+|||+|+...+.... ++-.+.+..|+.++.++++++ ++.+ .++|++||...+... |
T Consensus 86 --~~d~ViHlAa~~~~~~~~----~~~~~~~~~n~~gt~~ll~aa----~~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~ 154 (386)
T PLN02427 86 --MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDHPL 154 (386)
T ss_pred --cCCEEEEcccccChhhhh----hChHHHHHHHHHHHHHHHHHH----HhcC-CEEEEEeeeeeeCCCcCCCCCccccc
Confidence 479999999975432211 122344668999999999887 3333 699999997533210 0
Q ss_pred -----------------------CCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccc----cc---c
Q 024752 159 -----------------------MCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVE----KD---S 208 (263)
Q Consensus 159 -----------------------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~----~~---~ 208 (263)
....|+.+|.+.+.+++.++.. .|+.+..++|+.|..|...... .. .
T Consensus 155 ~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~ 231 (386)
T PLN02427 155 RQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 231 (386)
T ss_pred ccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cCCceEEecccceeCCCCCccccccccccccc
Confidence 1136999999999999876543 4899999999999988532110 00 1
Q ss_pred hhH-HHHHHhHhcCC---------CCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCC
Q 024752 209 NFL-EHANRMVLRTP---------MLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGG 257 (263)
Q Consensus 209 ~~~-~~~~~~~~~~~---------~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG 257 (263)
.+. ..........| ...+...+|++++++.++... ....|+.+++.+|
T Consensus 232 ~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~-~~~~g~~yni~~~ 289 (386)
T PLN02427 232 RVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENP-ARANGHIFNVGNP 289 (386)
T ss_pred hHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCc-ccccCceEEeCCC
Confidence 111 11111211211 124677999999998776432 1235789999886
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.1e-18 Score=150.21 Aligned_cols=230 Identities=17% Similarity=0.111 Sum_probs=156.6
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCccE
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNI 94 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 94 (263)
+++||||+|+||++++++|+++|++|++++|......+...++... .++..+.+|+++++++.++++. .++|+
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~------~~~d~ 73 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERI-TRVTFVEGDLRDRELLDRLFEE------HKIDA 73 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccc-cceEEEECCCCCHHHHHHHHHh------CCCcE
Confidence 4799999999999999999999999998876544322222222221 1577889999999999888763 47999
Q ss_pred EEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC-----------CCCcch
Q 024752 95 LINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI-----------PMCSIY 163 (263)
Q Consensus 95 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----------~~~~~Y 163 (263)
+||+||.....+ ..++..+.++.|+.++..+++++ .+.+.+++|++||...+... .+...|
T Consensus 74 vv~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y 145 (328)
T TIGR01179 74 VIHFAGLIAVGE----SVQDPLKYYRNNVVNTLNLLEAM----QQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPY 145 (328)
T ss_pred EEECccccCcch----hhcCchhhhhhhHHHHHHHHHHH----HhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCch
Confidence 999999764332 33445678899999999999886 44445799999986543211 133679
Q ss_pred hhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccc-----ccchhHHHHHHhHh-----------cCCC----
Q 024752 164 ASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVE-----KDSNFLEHANRMVL-----------RTPM---- 223 (263)
Q Consensus 164 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~~~~~~-----------~~~~---- 223 (263)
+.+|++.+.+++.++.+. .++++..++|+.+..+...... ....+......... ..|.
T Consensus 146 ~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 223 (328)
T TIGR01179 146 GRSKLMSERILRDLSKAD--PGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGT 223 (328)
T ss_pred HHHHHHHHHHHHHHHHhc--cCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCc
Confidence 999999999999887652 4799999999988876432211 01111111111110 0111
Q ss_pred --CCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 224 --LRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 224 --~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
..+...+|+++++..++........|+.+++.++..++
T Consensus 224 ~~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s 263 (328)
T TIGR01179 224 CVRDYIHVMDLADAHLAALEYLLNGGESHVYNLGYGQGFS 263 (328)
T ss_pred eEEeeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCccc
Confidence 23567899999988776532222457899998876554
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.7e-18 Score=142.02 Aligned_cols=202 Identities=17% Similarity=0.094 Sum_probs=134.1
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCH-HHHHHHHHHHHhhc
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR-AQREKLMETVSSQF 88 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~ 88 (263)
+.++|+++||||+|+||++++++|++.|++|+++.|+.+....... .+..+.++.+|+++. +++.+.+
T Consensus 14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~l~~~~------- 82 (251)
T PLN00141 14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP----QDPSLQIVRADVTEGSDKLVEAI------- 82 (251)
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc----cCCceEEEEeeCCCCHHHHHHHh-------
Confidence 3567899999999999999999999999999999999876543321 133588899999983 3332222
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccc---cCCCCcchhh
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVI---AIPMCSIYAS 165 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~---~~~~~~~Y~~ 165 (263)
...+|++|+++|...... . ...+++|+.+..++++++ .+.+.++||++||...+. +.+....|..
T Consensus 83 ~~~~d~vi~~~g~~~~~~--~------~~~~~~n~~~~~~ll~a~----~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~ 150 (251)
T PLN00141 83 GDDSDAVICATGFRRSFD--P------FAPWKVDNFGTVNLVEAC----RKAGVTRFILVSSILVNGAAMGQILNPAYIF 150 (251)
T ss_pred hcCCCEEEECCCCCcCCC--C------CCceeeehHHHHHHHHHH----HHcCCCEEEEEccccccCCCcccccCcchhH
Confidence 136899999998642211 0 112468888988888887 455568999999986432 2223445766
Q ss_pred HHHHHHHHHHHHHHH--HccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 166 SKVAMNQLTKNLACE--WAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 166 sK~a~~~~~~~~a~e--~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
.|.+...+...+..| +...|++++.|+||++.++.......... ...+...+.+++|+|+.+..++...
T Consensus 151 ~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~~~~~---------~~~~~~~~i~~~dvA~~~~~~~~~~ 221 (251)
T PLN00141 151 LNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNIVMEP---------EDTLYEGSISRDQVAEVAVEALLCP 221 (251)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceEEECC---------CCccccCcccHHHHHHHHHHHhcCh
Confidence 665444333222222 45679999999999998764321110000 0011223578999999999887543
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.82 E-value=7e-18 Score=147.21 Aligned_cols=228 Identities=19% Similarity=0.161 Sum_probs=150.5
Q ss_pred EEEEecCCCchHHHHHHHHHHCC--CeEEEeeCCchhH---HHHHHHHHhcC--------CceEEEeccCCCHHH--HHH
Q 024752 15 TALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETEL---NQRIQEWKSKG--------LQVSGSVCDLKIRAQ--REK 79 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g--~~V~~~~r~~~~~---~~~~~~~~~~~--------~~~~~~~~D~~~~~~--~~~ 79 (263)
+|+||||+|+||++++++|+++| ++|+++.|+.... +.+.+.+.... .++.++.+|++++.- -..
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 48999999999999999999999 6799999987632 22222222111 468889999986531 011
Q ss_pred HHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC--
Q 024752 80 LMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI-- 157 (263)
Q Consensus 80 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-- 157 (263)
....+. ..+|++||||+..... ..++..+++|+.++.++++.+. +.+..+++++||.......
T Consensus 81 ~~~~~~----~~~d~vih~a~~~~~~-------~~~~~~~~~nv~g~~~ll~~a~----~~~~~~~v~iSS~~v~~~~~~ 145 (367)
T TIGR01746 81 EWERLA----ENVDTIVHNGALVNWV-------YPYSELRAANVLGTREVLRLAA----SGRAKPLHYVSTISVLAAIDL 145 (367)
T ss_pred HHHHHH----hhCCEEEeCCcEeccC-------CcHHHHhhhhhHHHHHHHHHHh----hCCCceEEEEccccccCCcCC
Confidence 112221 4689999999975421 2356678899999999998873 3444569999998765321
Q ss_pred --------------CCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhH-HHHHHhH--hc
Q 024752 158 --------------PMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFL-EHANRMV--LR 220 (263)
Q Consensus 158 --------------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~-~~~~~~~--~~ 220 (263)
.....|+.+|.+.+.+++.++. .|++++.++||.+.++............ ....... ..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~ 221 (367)
T TIGR01746 146 STVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGA 221 (367)
T ss_pred CCccccccccccccccCCChHHHHHHHHHHHHHHHh----cCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCC
Confidence 1134699999999998876543 3899999999999976322211111111 1111100 11
Q ss_pred CCC-----CCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 221 TPM-----LRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 221 ~~~-----~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
.|. ..+.++++++++++.++.......+|+.+++.++..++
T Consensus 222 ~p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s 267 (367)
T TIGR01746 222 YPDSPELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVS 267 (367)
T ss_pred CCCCCccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCC
Confidence 221 22677899999999887655443458999999876543
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.3e-18 Score=146.56 Aligned_cols=223 Identities=17% Similarity=0.171 Sum_probs=156.5
Q ss_pred EEecCCCchHHHHHHHHHHCC--CeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCccE
Q 024752 17 LVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNI 94 (263)
Q Consensus 17 lVtGas~giG~~~a~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 94 (263)
|||||+|+||++++++|+++| .+|.++++.+..... ...... ....++.+|+++++++.++++ ..|+
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~~~~-~~~~~~~~Di~d~~~l~~a~~--------g~d~ 69 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDLQKS-GVKEYIQGDITDPESLEEALE--------GVDV 69 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhhhcc-cceeEEEeccccHHHHHHHhc--------CCce
Confidence 699999999999999999999 689888887654321 111111 123388999999999999884 5799
Q ss_pred EEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC-----------------
Q 024752 95 LINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI----------------- 157 (263)
Q Consensus 95 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~----------------- 157 (263)
|||.|+...... ....++++++|+.|+-++++++ ++.+-.++|++||.......
T Consensus 70 V~H~Aa~~~~~~-----~~~~~~~~~vNV~GT~nvl~aa----~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~ 140 (280)
T PF01073_consen 70 VFHTAAPVPPWG-----DYPPEEYYKVNVDGTRNVLEAA----RKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPS 140 (280)
T ss_pred EEEeCccccccC-----cccHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccc
Confidence 999999764432 3456889999999999999998 45567899999999875430
Q ss_pred CCCcchhhHHHHHHHHHHHHHH-HHc-cCCcEEEEEecCcccCCccccccccchhHHHHHH------hHhcCCCCCCCCh
Q 024752 158 PMCSIYASSKVAMNQLTKNLAC-EWA-KDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANR------MVLRTPMLRPGEP 229 (263)
Q Consensus 158 ~~~~~Y~~sK~a~~~~~~~~a~-e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 229 (263)
.....|+.||+..|.++..... ++. ...++..+|+|..|..|.-...... ..+.... .....-...+..+
T Consensus 141 ~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~--~~~~~~~g~~~~~~g~~~~~~~~vyV 218 (280)
T PF01073_consen 141 SPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPR--LVKMVRSGLFLFQIGDGNNLFDFVYV 218 (280)
T ss_pred cccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccch--hhHHHHhcccceeecCCCceECcEeH
Confidence 1334799999999999987654 222 1258999999999998864332211 1111010 0001112235668
Q ss_pred hhHHHHHHHHcC---CC--CCCccCcEEEeCCCcccc
Q 024752 230 NEVSSVVAFLCL---SA--TSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 230 ~~va~~~~~l~s---~~--~~~~~G~~i~~dgG~~~~ 261 (263)
+++|++.+..+. +. ...+.||.+.+..|..+.
T Consensus 219 ~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~~ 255 (280)
T PF01073_consen 219 ENVAHAHVLAAQALLEPGKPERVAGQAYFITDGEPVP 255 (280)
T ss_pred HHHHHHHHHHHHHhccccccccCCCcEEEEECCCccC
Confidence 999998753221 22 456899999999887765
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.3e-18 Score=140.48 Aligned_cols=216 Identities=22% Similarity=0.225 Sum_probs=158.0
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCccEE
Q 024752 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNIL 95 (263)
Q Consensus 16 vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~l 95 (263)
||||||+|.||.+++++|.++|+.|+.+.|..........+. ++.++.+|+++.+.++++++.. .+|++
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~dl~~~~~~~~~~~~~------~~d~v 69 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL-----NVEFVIGDLTDKEQLEKLLEKA------NIDVV 69 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT-----TEEEEESETTSHHHHHHHHHHH------TESEE
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc-----eEEEEEeecccccccccccccc------CceEE
Confidence 799999999999999999999999888888776544333221 6889999999999999998864 68999
Q ss_pred EeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC-----------CCCcchh
Q 024752 96 INNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI-----------PMCSIYA 164 (263)
Q Consensus 96 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----------~~~~~Y~ 164 (263)
||+|+..... .+.+.....++.|+.+..++++++ ++.+..++|++||...+... .+...|+
T Consensus 70 i~~a~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~ 141 (236)
T PF01370_consen 70 IHLAAFSSNP----ESFEDPEEIIEANVQGTRNLLEAA----REAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYG 141 (236)
T ss_dssp EEEBSSSSHH----HHHHSHHHHHHHHHHHHHHHHHHH----HHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHH
T ss_pred EEeecccccc----cccccccccccccccccccccccc----cccccccccccccccccccccccccccccccccccccc
Confidence 9999975311 134667888999999999998888 44445799999996544322 1345699
Q ss_pred hHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCC---------CCCCCChhhHHHH
Q 024752 165 SSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTP---------MLRPGEPNEVSSV 235 (263)
Q Consensus 165 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~va~~ 235 (263)
.+|...+.+.+.+..+. ++++..++|+.+..+......................| ...+...+|++++
T Consensus 142 ~~K~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~ 218 (236)
T PF01370_consen 142 ASKRAAEELLRDYAKKY---GLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEA 218 (236)
T ss_dssp HHHHHHHHHHHHHHHHH---TSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHH
T ss_pred ccccccccccccccccc---ccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHH
Confidence 99999999999988776 89999999999998881111111111122222222221 1224568999999
Q ss_pred HHHHcCCCCCCccCcEEEeC
Q 024752 236 VAFLCLSATSYVTGQVICVD 255 (263)
Q Consensus 236 ~~~l~s~~~~~~~G~~i~~d 255 (263)
+..++.... ..|+.+|+.
T Consensus 219 ~~~~~~~~~--~~~~~yNig 236 (236)
T PF01370_consen 219 IVAALENPK--AAGGIYNIG 236 (236)
T ss_dssp HHHHHHHSC--TTTEEEEES
T ss_pred HHHHHhCCC--CCCCEEEeC
Confidence 988876444 568888873
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.7e-18 Score=159.28 Aligned_cols=223 Identities=16% Similarity=0.129 Sum_probs=154.0
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHC-CCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHH-HHHHHHHHHhhc
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAF-GAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQ-REKLMETVSSQF 88 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~ 88 (263)
+++|+||||||+|+||++++++|+++ |++|++++|+........ ...++.++.+|+++.++ +++++
T Consensus 313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~-----~~~~~~~~~gDl~d~~~~l~~~l------- 380 (660)
T PRK08125 313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFL-----GHPRFHFVEGDISIHSEWIEYHI------- 380 (660)
T ss_pred hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhc-----CCCceEEEeccccCcHHHHHHHh-------
Confidence 67899999999999999999999986 799999999875432211 12357788999998655 33333
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC-----------
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI----------- 157 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~----------- 157 (263)
..+|+|||+|+...+.. ..+..+..+++|+.++.++++++. +.+ .++|++||...+...
T Consensus 381 -~~~D~ViHlAa~~~~~~----~~~~~~~~~~~Nv~~t~~ll~a~~----~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~ 450 (660)
T PRK08125 381 -KKCDVVLPLVAIATPIE----YTRNPLRVFELDFEENLKIIRYCV----KYN-KRIIFPSTSEVYGMCTDKYFDEDTSN 450 (660)
T ss_pred -cCCCEEEECccccCchh----hccCHHHHHHhhHHHHHHHHHHHH----hcC-CeEEEEcchhhcCCCCCCCcCccccc
Confidence 35899999999765432 122345678999999999999984 333 699999996533210
Q ss_pred ----C---CCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccc-----ccchhHHHHHHhHhcCC---
Q 024752 158 ----P---MCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVE-----KDSNFLEHANRMVLRTP--- 222 (263)
Q Consensus 158 ----~---~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~--- 222 (263)
| +...|+.||.+.+.+++.++.++ |+++..++|+.+..|...... ................+
T Consensus 451 ~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~---g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~ 527 (660)
T PRK08125 451 LIVGPINKQRWIYSVSKQLLDRVIWAYGEKE---GLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKL 527 (660)
T ss_pred cccCCCCCCccchHHHHHHHHHHHHHHHHhc---CCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEE
Confidence 1 12369999999999999886654 799999999999987543211 01111111122221111
Q ss_pred ------CCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCc
Q 024752 223 ------MLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGY 258 (263)
Q Consensus 223 ------~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~ 258 (263)
...+...+|++++++.++........|+.+++.+|.
T Consensus 528 ~g~g~~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~ 569 (660)
T PRK08125 528 VDGGKQKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPD 569 (660)
T ss_pred eCCCceeeceeeHHHHHHHHHHHHhccccccCCeEEEcCCCC
Confidence 123677999999988776533223468999998874
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.4e-18 Score=146.01 Aligned_cols=211 Identities=24% Similarity=0.204 Sum_probs=148.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
++++||||+|+||+++++.|+++|++|++++|+++..... . ...+.++.+|+++.+++.++++ .+|
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~--~~~~~~~~~D~~~~~~l~~~~~--------~~d 66 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL----E--GLDVEIVEGDLRDPASLRKAVA--------GCR 66 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc----c--cCCceEEEeeCCCHHHHHHHHh--------CCC
Confidence 4699999999999999999999999999999987653221 1 1247788999999988877763 579
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCC---------------
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIP--------------- 158 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~--------------- 158 (263)
++||+|+.... ..++++..+++|+.++.++++++. +.+.+++|++||...+...+
T Consensus 67 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~ 136 (328)
T TIGR03466 67 ALFHVAADYRL------WAPDPEEMYAANVEGTRNLLRAAL----EAGVERVVYTSSVATLGVRGDGTPADETTPSSLDD 136 (328)
T ss_pred EEEEeceeccc------CCCCHHHHHHHHHHHHHHHHHHHH----HhCCCeEEEEechhhcCcCCCCCCcCccCCCCccc
Confidence 99999985421 123356789999999999999874 44457999999976543211
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCC-----CCCCCChhhHH
Q 024752 159 MCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTP-----MLRPGEPNEVS 233 (263)
Q Consensus 159 ~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~va 233 (263)
....|+.+|.+.+.+++.++.+ .|+++..++|+.+..+............. .......| ...+...+|++
T Consensus 137 ~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~~~G~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~D~a 211 (328)
T TIGR03466 137 MIGHYKRSKFLAEQAALEMAAE---KGLPVVIVNPSTPIGPRDIKPTPTGRIIV--DFLNGKMPAYVDTGLNLVHVDDVA 211 (328)
T ss_pred ccChHHHHHHHHHHHHHHHHHh---cCCCEEEEeCCccCCCCCCCCCcHHHHHH--HHHcCCCceeeCCCcceEEHHHHH
Confidence 1347999999999999987665 38999999999998765322111111100 10111111 12356799999
Q ss_pred HHHHHHcCCCCCCccCcEEEeCC
Q 024752 234 SVVAFLCLSATSYVTGQVICVDG 256 (263)
Q Consensus 234 ~~~~~l~s~~~~~~~G~~i~~dg 256 (263)
+++..++... ..|+.+++++
T Consensus 212 ~a~~~~~~~~---~~~~~~~~~~ 231 (328)
T TIGR03466 212 EGHLLALERG---RIGERYILGG 231 (328)
T ss_pred HHHHHHHhCC---CCCceEEecC
Confidence 9987766442 2578888853
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.1e-17 Score=145.60 Aligned_cols=219 Identities=14% Similarity=0.109 Sum_probs=149.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHC-CCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCC-CHHHHHHHHHHHHhhcCCC
Q 024752 14 MTALVTGGTKGIGYAVVEELAAF-GAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLK-IRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~~~ 91 (263)
|+|+||||+|.||++++++|+++ |++|++++|+.+...... . ...+.++.+|++ +.+.+.+++ .+
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~----~-~~~~~~~~~Dl~~~~~~~~~~~--------~~ 68 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLV----N-HPRMHFFEGDITINKEWIEYHV--------KK 68 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhc----c-CCCeEEEeCCCCCCHHHHHHHH--------cC
Confidence 57999999999999999999986 699999998764332221 1 234788899998 666555543 35
Q ss_pred ccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC--------------
Q 024752 92 LNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI-------------- 157 (263)
Q Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-------------- 157 (263)
+|+|||+|+...+.. ..++.+..+++|+.++.++++++ ++.+ .++|++||...+...
T Consensus 69 ~d~ViH~aa~~~~~~----~~~~p~~~~~~n~~~~~~ll~aa----~~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~ 139 (347)
T PRK11908 69 CDVILPLVAIATPAT----YVKQPLRVFELDFEANLPIVRSA----VKYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVY 139 (347)
T ss_pred CCEEEECcccCChHH----hhcCcHHHHHHHHHHHHHHHHHH----HhcC-CeEEEEecceeeccCCCcCcCcccccccc
Confidence 899999999764432 22344577899999999999887 3343 699999997543210
Q ss_pred ----CCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccc-----ccchhHHHHHHhHhcC-------
Q 024752 158 ----PMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVE-----KDSNFLEHANRMVLRT------- 221 (263)
Q Consensus 158 ----~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~~~~~~~~------- 221 (263)
.+...|+.+|.+.+.+++.++.+ .|+.+..+.|+.+..|...... ...-............
T Consensus 140 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 216 (347)
T PRK11908 140 GPINKPRWIYACSKQLMDRVIWAYGME---EGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDG 216 (347)
T ss_pred CcCCCccchHHHHHHHHHHHHHHHHHH---cCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecC
Confidence 01226999999999999887654 3889999999999887543211 0111111122222111
Q ss_pred --CCCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCC
Q 024752 222 --PMLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGG 257 (263)
Q Consensus 222 --~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG 257 (263)
....+...+|++++++.++........|+.+++.++
T Consensus 217 g~~~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~ 254 (347)
T PRK11908 217 GSQKRAFTDIDDGIDALMKIIENKDGVASGKIYNIGNP 254 (347)
T ss_pred CceeeccccHHHHHHHHHHHHhCccccCCCCeEEeCCC
Confidence 123468899999999887754322245889999875
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.3e-17 Score=156.94 Aligned_cols=226 Identities=12% Similarity=0.035 Sum_probs=154.9
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHC--CCeEEEeeCCc--hhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAF--GAIVHTCSRNE--TELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~--g~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
..++|+||||||+|+||++++++|+++ +++|+.++|.. .....+... ....++.++.+|+++.+.+..++..
T Consensus 3 ~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~--~~~~~v~~~~~Dl~d~~~~~~~~~~-- 78 (668)
T PLN02260 3 TYEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPS--KSSPNFKFVKGDIASADLVNYLLIT-- 78 (668)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhc--ccCCCeEEEECCCCChHHHHHHHhh--
Confidence 356899999999999999999999998 67899888753 122111111 1124588899999998877665432
Q ss_pred hhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEcccccccc--------
Q 024752 86 SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVIA-------- 156 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~-------- 156 (263)
..+|+|||+|+...... +.++....+++|+.++.++++++ ++.+ .+++|++||...+..
T Consensus 79 ----~~~D~ViHlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~vkr~I~~SS~~vyg~~~~~~~~~ 146 (668)
T PLN02260 79 ----EGIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDADVG 146 (668)
T ss_pred ----cCCCEEEECCCccCchh----hhhCHHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEcchHHhCCCccccccC
Confidence 46999999999764322 22334567899999999999987 3333 469999999754321
Q ss_pred ------CCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCC--------
Q 024752 157 ------IPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTP-------- 222 (263)
Q Consensus 157 ------~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-------- 222 (263)
..+...|+.+|.+.+.+++.+..++ ++++..++|+.|+.+..... ..............+
T Consensus 147 ~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~~---~l~~vilR~~~VyGp~~~~~---~~i~~~~~~a~~g~~i~i~g~g~ 220 (668)
T PLN02260 147 NHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPE---KLIPKFILLAMQGKPLPIHGDGS 220 (668)
T ss_pred ccccCCCCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECcccccCcCCCcc---cHHHHHHHHHhCCCCeEEecCCC
Confidence 1134579999999999999876654 79999999999998753211 111111111111111
Q ss_pred -CCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCccc
Q 024752 223 -MLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 223 -~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
...+...+|+++++..++.... .|+.+++.++..+
T Consensus 221 ~~r~~ihV~Dva~a~~~~l~~~~---~~~vyni~~~~~~ 256 (668)
T PLN02260 221 NVRSYLYCEDVAEAFEVVLHKGE---VGHVYNIGTKKER 256 (668)
T ss_pred ceEeeEEHHHHHHHHHHHHhcCC---CCCEEEECCCCee
Confidence 1235679999999887764332 4789999887654
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.8e-19 Score=145.78 Aligned_cols=219 Identities=18% Similarity=0.185 Sum_probs=149.5
Q ss_pred EEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhc--CCce----EEEeccCCCHHHHHHHHHHHHhhc
Q 024752 16 ALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSK--GLQV----SGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 16 vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~--~~~~----~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
||||||+|.||++++++|++.+. .+++++|++..+-+...++... +.++ .++.+|++|.+.+..++++
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~----- 75 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEE----- 75 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhh-----
Confidence 79999999999999999999986 7999999999999998888532 2223 3568899999988888754
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
.++|+++|.|+.-+.+..+ +...+.+++|++|+.++++++ .+.+-.++|++|+.-+..| ...|++||.
T Consensus 76 -~~pdiVfHaAA~KhVpl~E----~~p~eav~tNv~GT~nv~~aa----~~~~v~~~v~ISTDKAv~P---tnvmGatKr 143 (293)
T PF02719_consen 76 -YKPDIVFHAAALKHVPLME----DNPFEAVKTNVLGTQNVAEAA----IEHGVERFVFISTDKAVNP---TNVMGATKR 143 (293)
T ss_dssp --T-SEEEE------HHHHC----CCHHHHHHHHCHHHHHHHHHH----HHTT-SEEEEEEECGCSS-----SHHHHHHH
T ss_pred -cCCCEEEEChhcCCCChHH----hCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEccccccCCC---CcHHHHHHH
Confidence 4899999999987664433 345778999999999999999 4455679999999877654 478999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCC--------CCCCChhhHHHHHHHHc
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPM--------LRPGEPNEVSSVVAFLC 240 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~va~~~~~l~ 240 (263)
..|.++.+++......+.++.+|+-|.|.....+- ++-+..+..+.-|+ +-+.+++|.++.++.-+
T Consensus 144 laE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSV------ip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~ 217 (293)
T PF02719_consen 144 LAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSV------IPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQAA 217 (293)
T ss_dssp HHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSC------HHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcH------HHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHHH
Confidence 99999999988876778999999999886533221 11222333333332 22467889999887655
Q ss_pred CCCCCCccCcEEEeCCCccc
Q 024752 241 LSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 241 s~~~~~~~G~~i~~dgG~~~ 260 (263)
.-.. .|+.+..|=|.++
T Consensus 218 ~~~~---~geifvl~mg~~v 234 (293)
T PF02719_consen 218 ALAK---GGEIFVLDMGEPV 234 (293)
T ss_dssp HH-----TTEEEEE---TCE
T ss_pred hhCC---CCcEEEecCCCCc
Confidence 4332 4888888887765
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.2e-17 Score=147.15 Aligned_cols=223 Identities=15% Similarity=0.132 Sum_probs=148.2
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHH--HHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQ--RIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
+.++++++||||+|+||+++++.|+++|++|++++|+....+. ...+.......+.++.+|++|++++.++++..
T Consensus 57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~--- 133 (390)
T PLN02657 57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE--- 133 (390)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh---
Confidence 4567899999999999999999999999999999998765431 11122222345788999999999999888743
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+.++|+||||++..... . ...+++|+.++.++++++ ++.+.+++|++||..... +...|..+|
T Consensus 134 -~~~~D~Vi~~aa~~~~~-----~----~~~~~vn~~~~~~ll~aa----~~~gv~r~V~iSS~~v~~---p~~~~~~sK 196 (390)
T PLN02657 134 -GDPVDVVVSCLASRTGG-----V----KDSWKIDYQATKNSLDAG----REVGAKHFVLLSAICVQK---PLLEFQRAK 196 (390)
T ss_pred -CCCCcEEEECCccCCCC-----C----ccchhhHHHHHHHHHHHH----HHcCCCEEEEEeeccccC---cchHHHHHH
Confidence 12799999999843211 1 123567888888888876 455567999999986542 345688899
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhc-CCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLR-TPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
...+...+. ...|++...++|+.+..++........... ....+... .+...+.+.+|+++.+..++.+..
T Consensus 197 ~~~E~~l~~-----~~~gl~~tIlRp~~~~~~~~~~~~~~~~g~-~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~-- 268 (390)
T PLN02657 197 LKFEAELQA-----LDSDFTYSIVRPTAFFKSLGGQVEIVKDGG-PYVMFGDGKLCACKPISEADLASFIADCVLDES-- 268 (390)
T ss_pred HHHHHHHHh-----ccCCCCEEEEccHHHhcccHHHHHhhccCC-ceEEecCCcccccCceeHHHHHHHHHHHHhCcc--
Confidence 988877654 245899999999987654321100000000 00000000 011124678899998887764332
Q ss_pred ccCcEEEeCC-Cccc
Q 024752 247 VTGQVICVDG-GYSV 260 (263)
Q Consensus 247 ~~G~~i~~dg-G~~~ 260 (263)
..|+.+++.| |..+
T Consensus 269 ~~~~~~~Iggp~~~~ 283 (390)
T PLN02657 269 KINKVLPIGGPGKAL 283 (390)
T ss_pred ccCCEEEcCCCCccc
Confidence 3578999987 4443
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.9e-17 Score=142.59 Aligned_cols=228 Identities=15% Similarity=0.101 Sum_probs=153.2
Q ss_pred ccccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHH
Q 024752 5 REQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 5 ~~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 84 (263)
++..|--++|+|+||||+|.||+++++.|.++|++|++++|...... ........++.+|+++.+.+..++
T Consensus 13 ~~~~~~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~------~~~~~~~~~~~~Dl~d~~~~~~~~--- 83 (370)
T PLN02695 13 REPYWPSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM------SEDMFCHEFHLVDLRVMENCLKVT--- 83 (370)
T ss_pred CCCCCCCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc------ccccccceEEECCCCCHHHHHHHH---
Confidence 44555667899999999999999999999999999999998653211 011112456789999987766654
Q ss_pred HhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccc---------
Q 024752 85 SSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVI--------- 155 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~--------- 155 (263)
.++|+|||+|+......... .+....+..|+.++.++++++ ++.+..++|++||...+.
T Consensus 84 -----~~~D~Vih~Aa~~~~~~~~~---~~~~~~~~~N~~~t~nll~aa----~~~~vk~~V~~SS~~vYg~~~~~~~~~ 151 (370)
T PLN02695 84 -----KGVDHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEAA----RINGVKRFFYASSACIYPEFKQLETNV 151 (370)
T ss_pred -----hCCCEEEEcccccCCccccc---cCchhhHHHHHHHHHHHHHHH----HHhCCCEEEEeCchhhcCCccccCcCC
Confidence 35799999998654322111 122445778999999999987 444456999999974321
Q ss_pred --------cCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhH-HHHHHhH---hcCC-
Q 024752 156 --------AIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFL-EHANRMV---LRTP- 222 (263)
Q Consensus 156 --------~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~-~~~~~~~---~~~~- 222 (263)
+..+...|+.+|.+.+.+++.++..+ |+++..++|+.+..|............ ....... ...+
T Consensus 152 ~~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~~---g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 228 (370)
T PLN02695 152 SLKESDAWPAEPQDAYGLEKLATEELCKHYTKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEM 228 (370)
T ss_pred CcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEE
Confidence 12234579999999999998876554 899999999999987532111111111 1111111 1111
Q ss_pred ------CCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCccc
Q 024752 223 ------MLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 223 ------~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
...+...+|+++++..+.... .++.+++.+|..+
T Consensus 229 ~g~g~~~r~~i~v~D~a~ai~~~~~~~----~~~~~nv~~~~~~ 268 (370)
T PLN02695 229 WGDGKQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV 268 (370)
T ss_pred eCCCCeEEeEEeHHHHHHHHHHHHhcc----CCCceEecCCCce
Confidence 123567899999988776532 2578899887654
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.77 E-value=8.3e-17 Score=143.78 Aligned_cols=220 Identities=15% Similarity=0.091 Sum_probs=146.5
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
-++|+||||||+|+||++++++|+++|++|++++|......+..... ....++.++..|+.++. + .
T Consensus 117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~-~~~~~~~~i~~D~~~~~-----l--------~ 182 (442)
T PLN02206 117 RKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHH-FSNPNFELIRHDVVEPI-----L--------L 182 (442)
T ss_pred cCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhh-ccCCceEEEECCccChh-----h--------c
Confidence 46789999999999999999999999999999987643222211111 11234677788886542 1 2
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc--------------
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA-------------- 156 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-------------- 156 (263)
.+|+|||+|+...+.. ..++..+.+++|+.++.++++++. +.+ .++|++||...+..
T Consensus 183 ~~D~ViHlAa~~~~~~----~~~~p~~~~~~Nv~gt~nLleaa~----~~g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~ 253 (442)
T PLN02206 183 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQVETYWGNV 253 (442)
T ss_pred CCCEEEEeeeecchhh----hhcCHHHHHHHHHHHHHHHHHHHH----HhC-CEEEEECChHHhCCCCCCCCCccccccC
Confidence 5899999999764322 122346789999999999999983 333 48999999865421
Q ss_pred --CCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCC---------CCC
Q 024752 157 --IPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTP---------MLR 225 (263)
Q Consensus 157 --~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 225 (263)
......|+.+|.+.+.+++.+...+ |+++..+.|+.+..|...... ...+...........+ ...
T Consensus 254 ~P~~~~s~Y~~SK~~aE~~~~~y~~~~---g~~~~ilR~~~vyGp~~~~~~-~~~v~~~i~~~l~~~~i~i~g~G~~~rd 329 (442)
T PLN02206 254 NPIGVRSCYDEGKRTAETLTMDYHRGA---NVEVRIARIFNTYGPRMCIDD-GRVVSNFVAQALRKEPLTVYGDGKQTRS 329 (442)
T ss_pred CCCCccchHHHHHHHHHHHHHHHHHHh---CCCeEEEEeccccCCCCCccc-cchHHHHHHHHHcCCCcEEeCCCCEEEe
Confidence 1123569999999999998776554 799999999999877532110 0111111122221111 113
Q ss_pred CCChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 226 PGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 226 ~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
+...+|+++++..++... .+..+|+.+|..++
T Consensus 330 fi~V~Dva~ai~~a~e~~----~~g~yNIgs~~~~s 361 (442)
T PLN02206 330 FQFVSDLVEGLMRLMEGE----HVGPFNLGNPGEFT 361 (442)
T ss_pred EEeHHHHHHHHHHHHhcC----CCceEEEcCCCcee
Confidence 567999999988776432 13489998876543
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.9e-17 Score=138.65 Aligned_cols=217 Identities=14% Similarity=0.157 Sum_probs=140.4
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh--hcCCCcc
Q 024752 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS--QFDGKLN 93 (263)
Q Consensus 16 vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~~~~id 93 (263)
||||||+|+||++++++|++.|+.++++.|+....... .. ...+|++|..+.+.+++.+.+ .+ +++|
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-~~---------~~~~~~~d~~~~~~~~~~~~~~~~~-~~~d 70 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-VN---------LVDLDIADYMDKEDFLAQIMAGDDF-GDIE 70 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-Hh---------hhhhhhhhhhhHHHHHHHHhccccc-CCcc
Confidence 79999999999999999999999766655544322111 01 123566666555555554432 22 4799
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc-----------CCCCcc
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA-----------IPMCSI 162 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~~~~~~ 162 (263)
+|||+|+...... .+. +..++.|+.++.++++++ ++.+ .++|++||...+.. ..+...
T Consensus 71 ~Vih~A~~~~~~~---~~~---~~~~~~n~~~t~~ll~~~----~~~~-~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~ 139 (308)
T PRK11150 71 AIFHEGACSSTTE---WDG---KYMMDNNYQYSKELLHYC----LERE-IPFLYASSAATYGGRTDDFIEEREYEKPLNV 139 (308)
T ss_pred EEEECceecCCcC---CCh---HHHHHHHHHHHHHHHHHH----HHcC-CcEEEEcchHHhCcCCCCCCccCCCCCCCCH
Confidence 9999999654321 122 346899999999999998 3433 47999999754321 113457
Q ss_pred hhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhH-HHHHHhHhcC-C---------CCCCCChhh
Q 024752 163 YASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFL-EHANRMVLRT-P---------MLRPGEPNE 231 (263)
Q Consensus 163 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~-~~~~~~~~~~-~---------~~~~~~~~~ 231 (263)
|+.+|.+.+.+++.++.+ .++++..++|+.+..+............ .......... + ...+...+|
T Consensus 140 Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D 216 (308)
T PRK11150 140 YGYSKFLFDEYVRQILPE---ANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGD 216 (308)
T ss_pred HHHHHHHHHHHHHHHHHH---cCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHH
Confidence 999999999998877554 3799999999999987543211111111 0001111111 1 123568999
Q ss_pred HHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 232 VSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 232 va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
++++++.++... .+..+++.+|..++
T Consensus 217 ~a~a~~~~~~~~----~~~~yni~~~~~~s 242 (308)
T PRK11150 217 VAAVNLWFWENG----VSGIFNCGTGRAES 242 (308)
T ss_pred HHHHHHHHHhcC----CCCeEEcCCCCcee
Confidence 999987766432 24699998887543
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.2e-16 Score=136.69 Aligned_cols=216 Identities=23% Similarity=0.236 Sum_probs=150.7
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCccE
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNI 94 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 94 (263)
.|||||++|+||++++++|.++|++|+.++|......... ..+.++.+|+++.+....+.+. ..|+
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~-------~~d~ 67 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-------SGVEFVVLDLTDRDLVDELAKG-------VPDA 67 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-------cccceeeecccchHHHHHHHhc-------CCCE
Confidence 3999999999999999999999999999999876544332 2467788999988555554431 1299
Q ss_pred EEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC-----------CCCc--
Q 024752 95 LINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI-----------PMCS-- 161 (263)
Q Consensus 95 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----------~~~~-- 161 (263)
+||+|+........ .. .....+.+|+.++.++++++ ++.+..++|+.||.....+. +..+
T Consensus 68 vih~aa~~~~~~~~--~~-~~~~~~~~nv~gt~~ll~aa----~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~ 140 (314)
T COG0451 68 VIHLAAQSSVPDSN--AS-DPAEFLDVNVDGTLNLLEAA----RAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLN 140 (314)
T ss_pred EEEccccCchhhhh--hh-CHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCC
Confidence 99999987553311 11 45678999999999999998 44567899996665543321 1112
Q ss_pred chhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCC---C-------CCCCChhh
Q 024752 162 IYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTP---M-------LRPGEPNE 231 (263)
Q Consensus 162 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~---~-------~~~~~~~~ 231 (263)
.|+.+|.+.|.+++.+.. ..|+.+..+.|+.+..|................+.....+ . ..+...+|
T Consensus 141 ~Yg~sK~~~E~~~~~~~~---~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 217 (314)
T COG0451 141 PYGVSKLAAEQLLRAYAR---LYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDD 217 (314)
T ss_pred HHHHHHHHHHHHHHHHHH---HhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHH
Confidence 499999999999998887 4589999999999988765443111111111111222222 1 12456899
Q ss_pred HHHHHHHHcCCCCCCccCcEEEeCCCc
Q 024752 232 VSSVVAFLCLSATSYVTGQVICVDGGY 258 (263)
Q Consensus 232 va~~~~~l~s~~~~~~~G~~i~~dgG~ 258 (263)
+++++..++..... + .+++.++.
T Consensus 218 ~a~~~~~~~~~~~~---~-~~ni~~~~ 240 (314)
T COG0451 218 VADALLLALENPDG---G-VFNIGSGT 240 (314)
T ss_pred HHHHHHHHHhCCCC---c-EEEeCCCC
Confidence 99999888765443 3 88888774
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.1e-16 Score=136.78 Aligned_cols=206 Identities=17% Similarity=0.178 Sum_probs=140.7
Q ss_pred EEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCccEEE
Q 024752 17 LVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILI 96 (263)
Q Consensus 17 lVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~li 96 (263)
|||||+|.||+++++.|++.|+.|+++.+. ..+|+++.+++.++++. .++|+||
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~--------------------~~~Dl~~~~~l~~~~~~------~~~d~Vi 54 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH--------------------KELDLTRQADVEAFFAK------EKPTYVI 54 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecc--------------------ccCCCCCHHHHHHHHhc------cCCCEEE
Confidence 699999999999999999999987765432 14799999988887764 3689999
Q ss_pred eCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC-------------C---CC
Q 024752 97 NNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI-------------P---MC 160 (263)
Q Consensus 97 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-------------~---~~ 160 (263)
|+|+....... ..++....+++|+.++.++++++ ++.+.+++|++||...+.+. + ..
T Consensus 55 h~A~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~ 127 (306)
T PLN02725 55 LAAAKVGGIHA---NMTYPADFIRENLQIQTNVIDAA----YRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTN 127 (306)
T ss_pred Eeeeeecccch---hhhCcHHHHHHHhHHHHHHHHHH----HHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCc
Confidence 99997532110 11233567889999999999998 44445799999997543211 1 12
Q ss_pred cchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccccc----chhHHHH-HHhH----------hcCCCCC
Q 024752 161 SIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKD----SNFLEHA-NRMV----------LRTPMLR 225 (263)
Q Consensus 161 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----~~~~~~~-~~~~----------~~~~~~~ 225 (263)
..|+.+|.+.+.+++.+..++ ++++..++|+.+..+........ ..+.... .... ...+...
T Consensus 128 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~ 204 (306)
T PLN02725 128 EWYAIAKIAGIKMCQAYRIQY---GWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLRE 204 (306)
T ss_pred chHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeec
Confidence 349999999999988876655 79999999999988753211110 1111110 0000 1112235
Q ss_pred CCChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 226 PGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 226 ~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
+..++|+++++..++.... .+..+++.+|..++
T Consensus 205 ~i~v~Dv~~~~~~~~~~~~---~~~~~ni~~~~~~s 237 (306)
T PLN02725 205 FLHVDDLADAVVFLMRRYS---GAEHVNVGSGDEVT 237 (306)
T ss_pred cccHHHHHHHHHHHHhccc---cCcceEeCCCCccc
Confidence 6789999999988775432 24567898876643
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.1e-16 Score=132.79 Aligned_cols=198 Identities=17% Similarity=0.129 Sum_probs=138.8
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCccE
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNI 94 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 94 (263)
+++||||+|+||++++++|.++|++|++++|. .+|+.+.+++.++++. .++|+
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~---------------------~~d~~~~~~~~~~~~~------~~~d~ 53 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS---------------------QLDLTDPEALERLLRA------IRPDA 53 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---------------------ccCCCCHHHHHHHHHh------CCCCE
Confidence 37999999999999999999999999999885 3799999998888763 36899
Q ss_pred EEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc-----------CCCCcch
Q 024752 95 LINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA-----------IPMCSIY 163 (263)
Q Consensus 95 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~~~~~~Y 163 (263)
+||+|+...... .....+..+++|+.++.++++++. +.+ .++|++||...+.+ ..+...|
T Consensus 54 vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y 124 (287)
T TIGR01214 54 VVNTAAYTDVDG----AESDPEKAFAVNALAPQNLARAAA----RHG-ARLVHISTDYVFDGEGKRPYREDDATNPLNVY 124 (287)
T ss_pred EEECCccccccc----cccCHHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEeeeeeecCCCCCCCCCCCCCCCcchh
Confidence 999999754321 223456788999999999999873 333 48999999654321 1124579
Q ss_pred hhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCC-------CCCCCChhhHHHHH
Q 024752 164 ASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTP-------MLRPGEPNEVSSVV 236 (263)
Q Consensus 164 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~va~~~ 236 (263)
+.+|.+.+.+++.+ +.++..++|+.+..+....... ..+. .......+ ...+...+|+++++
T Consensus 125 ~~~K~~~E~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~v~v~Dva~a~ 193 (287)
T TIGR01214 125 GQSKLAGEQAIRAA-------GPNALIVRTSWLYGGGGGRNFV-RTML---RLAGRGEELRVVDDQIGSPTYAKDLARVI 193 (287)
T ss_pred hHHHHHHHHHHHHh-------CCCeEEEEeeecccCCCCCCHH-HHHH---HHhhcCCCceEecCCCcCCcCHHHHHHHH
Confidence 99999999888764 4688999999998776311100 0011 11111111 12345689999998
Q ss_pred HHHcCCCCCCccCcEEEeCCCcccc
Q 024752 237 AFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 237 ~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
..++.... .-++.+++.++..++
T Consensus 194 ~~~~~~~~--~~~~~~ni~~~~~~s 216 (287)
T TIGR01214 194 AALLQRLA--RARGVYHLANSGQCS 216 (287)
T ss_pred HHHHhhcc--CCCCeEEEECCCCcC
Confidence 88775431 136678887665443
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.75 E-value=8.1e-17 Score=132.03 Aligned_cols=159 Identities=20% Similarity=0.186 Sum_probs=127.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
+.+|||||+|-||++.+..|++.|++|++++.-.....+...... ..++..|+.|.+-+.+++++ .+||
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~-----~~f~~gDi~D~~~L~~vf~~------~~id 69 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ-----FKFYEGDLLDRALLTAVFEE------NKID 69 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhcc-----CceEEeccccHHHHHHHHHh------cCCC
Confidence 479999999999999999999999999999987766554443321 57889999999988888875 5899
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccc-----------cCCCCcc
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVI-----------AIPMCSI 162 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-----------~~~~~~~ 162 (263)
.|||.||....+. |.+...+.++.|+.|+..+++++ ++.+-.+|||-||.+.+- +..+..+
T Consensus 70 aViHFAa~~~VgE----Sv~~Pl~Yy~NNv~gTl~Ll~am----~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NP 141 (329)
T COG1087 70 AVVHFAASISVGE----SVQNPLKYYDNNVVGTLNLIEAM----LQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINP 141 (329)
T ss_pred EEEECccccccch----hhhCHHHHHhhchHhHHHHHHHH----HHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCc
Confidence 9999999877665 77888999999999999999997 666666788777755432 1124568
Q ss_pred hhhHHHHHHHHHHHHHHHHccCCcEEEEEecC
Q 024752 163 YASSKVAMNQLTKNLACEWAKDKIRVNTVAPW 194 (263)
Q Consensus 163 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG 194 (263)
|+.||.+.|.+.+.+++.+ +.++..++-.
T Consensus 142 YG~sKlm~E~iL~d~~~a~---~~~~v~LRYF 170 (329)
T COG1087 142 YGRSKLMSEEILRDAAKAN---PFKVVILRYF 170 (329)
T ss_pred chhHHHHHHHHHHHHHHhC---CCcEEEEEec
Confidence 9999999999999998776 4666666533
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.2e-16 Score=139.83 Aligned_cols=218 Identities=13% Similarity=0.064 Sum_probs=145.6
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
+.++|+||||+|+||+++++.|+++|++|++++|......+....+. ...++.++..|+.+.. + .+
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~-~~~~~~~~~~Di~~~~-----~--------~~ 184 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLF-GNPRFELIRHDVVEPI-----L--------LE 184 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhc-cCCceEEEECcccccc-----c--------cC
Confidence 35689999999999999999999999999999986433222211111 1234677778886531 1 35
Q ss_pred ccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc---------------
Q 024752 92 LNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA--------------- 156 (263)
Q Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~--------------- 156 (263)
+|+|||+|+...+... ..+....+++|+.++.++++++. +.+ .++|++||...+..
T Consensus 185 ~D~ViHlAa~~~~~~~----~~~p~~~~~~Nv~gT~nLleaa~----~~g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~~ 255 (436)
T PLN02166 185 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLEHPQKETYWGNVN 255 (436)
T ss_pred CCEEEECceeccchhh----ccCHHHHHHHHHHHHHHHHHHHH----HhC-CEEEEECcHHHhCCCCCCCCCccccccCC
Confidence 8999999997544321 12346789999999999999983 333 48999999764321
Q ss_pred -CCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCC---------CCCC
Q 024752 157 -IPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTP---------MLRP 226 (263)
Q Consensus 157 -~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~ 226 (263)
......|+.+|.+.+.+++.+...+ ++++..+.|+.++.+..... ....+.........+.+ ...+
T Consensus 256 p~~p~s~Yg~SK~~aE~~~~~y~~~~---~l~~~ilR~~~vYGp~~~~~-~~~~i~~~i~~~l~~~~i~v~g~g~~~rdf 331 (436)
T PLN02166 256 PIGERSCYDEGKRTAETLAMDYHRGA---GVEVRIARIFNTYGPRMCLD-DGRVVSNFVAQTIRKQPMTVYGDGKQTRSF 331 (436)
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHHh---CCCeEEEEEccccCCCCCCC-ccchHHHHHHHHhcCCCcEEeCCCCeEEee
Confidence 1123469999999999999876554 79999999999988753211 00111111122222111 1235
Q ss_pred CChhhHHHHHHHHcCCCCCCccCcEEEeCCCccc
Q 024752 227 GEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 227 ~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
...+|+++++..++... .+..+|+.+|..+
T Consensus 332 i~V~Dva~ai~~~~~~~----~~giyNIgs~~~~ 361 (436)
T PLN02166 332 QYVSDLVDGLVALMEGE----HVGPFNLGNPGEF 361 (436)
T ss_pred EEHHHHHHHHHHHHhcC----CCceEEeCCCCcE
Confidence 67899999988776432 2458999887654
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.1e-16 Score=134.35 Aligned_cols=219 Identities=16% Similarity=0.110 Sum_probs=145.1
Q ss_pred EEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCccE
Q 024752 16 ALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNI 94 (263)
Q Consensus 16 vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 94 (263)
||||||+|.||+++++.|.+.|+ .|++++|..... .. .++. ...+..|+++++.++.+.+. .+ .++|+
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~-~~~~-----~~~~~~d~~~~~~~~~~~~~---~~-~~~D~ 69 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KF-LNLA-----DLVIADYIDKEDFLDRLEKG---AF-GKIEA 69 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hh-hhhh-----heeeeccCcchhHHHHHHhh---cc-CCCCE
Confidence 68999999999999999999998 688887765321 11 1111 12456788877666655542 23 57999
Q ss_pred EEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc-----------CCCCcch
Q 024752 95 LINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA-----------IPMCSIY 163 (263)
Q Consensus 95 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~~~~~~Y 163 (263)
|||+|+.... +.++.+..+++|+.++.++++++. +.+ .++|++||...+.. ..+...|
T Consensus 70 vvh~A~~~~~------~~~~~~~~~~~n~~~~~~ll~~~~----~~~-~~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y 138 (314)
T TIGR02197 70 IFHQGACSDT------TETDGEYMMENNYQYSKRLLDWCA----EKG-IPFIYASSAATYGDGEAGFREGRELERPLNVY 138 (314)
T ss_pred EEECccccCc------cccchHHHHHHHHHHHHHHHHHHH----HhC-CcEEEEccHHhcCCCCCCcccccCcCCCCCHH
Confidence 9999996432 233457789999999999999874 333 48999999764421 1145679
Q ss_pred hhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccch-hHHHHHHhHhcCC---------------CCCCC
Q 024752 164 ASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSN-FLEHANRMVLRTP---------------MLRPG 227 (263)
Q Consensus 164 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~---------------~~~~~ 227 (263)
+.+|.+.+.+++.+..+. ..++++..++|+.+..+.......... ............+ ...+.
T Consensus 139 ~~sK~~~e~~~~~~~~~~-~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i 217 (314)
T TIGR02197 139 GYSKFLFDQYVRRRVLPE-ALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFV 217 (314)
T ss_pred HHHHHHHHHHHHHHhHhh-ccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeE
Confidence 999999999998644332 225788999999998775321111111 1111122211111 12466
Q ss_pred ChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 228 EPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 228 ~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
..+|+++++..++.. . .+..+++.++..++
T Consensus 218 ~v~D~a~~i~~~~~~-~---~~~~yni~~~~~~s 247 (314)
T TIGR02197 218 YVKDVVDVNLWLLEN-G---VSGIFNLGTGRARS 247 (314)
T ss_pred EHHHHHHHHHHHHhc-c---cCceEEcCCCCCcc
Confidence 789999999887754 1 46699998887654
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=7.3e-16 Score=132.54 Aligned_cols=208 Identities=14% Similarity=0.073 Sum_probs=139.0
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCccE
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNI 94 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 94 (263)
+++||||+|.||++++++|.++|++|.+++|+..+.... .. ..+.++.+|++|++++.++++ .+|+
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l----~~--~~v~~v~~Dl~d~~~l~~al~--------g~d~ 67 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFL----KE--WGAELVYGDLSLPETLPPSFK--------GVTA 67 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhH----hh--cCCEEEECCCCCHHHHHHHHC--------CCCE
Confidence 699999999999999999999999999999987543222 11 247788999999998877763 5899
Q ss_pred EEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHHHHH
Q 024752 95 LINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLT 174 (263)
Q Consensus 95 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~~ 174 (263)
+||+++.... +.....++|+.++.++++++ ++.+-.++|++||..+.. . +...|..+|...+.+.
T Consensus 68 Vi~~~~~~~~---------~~~~~~~~~~~~~~~l~~aa----~~~gvkr~I~~Ss~~~~~-~-~~~~~~~~K~~~e~~l 132 (317)
T CHL00194 68 IIDASTSRPS---------DLYNAKQIDWDGKLALIEAA----KAAKIKRFIFFSILNAEQ-Y-PYIPLMKLKSDIEQKL 132 (317)
T ss_pred EEECCCCCCC---------CccchhhhhHHHHHHHHHHH----HHcCCCEEEEeccccccc-c-CCChHHHHHHHHHHHH
Confidence 9998763211 12335678888988888887 555567999999864321 1 2356888898877665
Q ss_pred HHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCcEEEe
Q 024752 175 KNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVICV 254 (263)
Q Consensus 175 ~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~ 254 (263)
+ ..|++.+.++|+.+..++...... +.................+.+.+|+++++..++.... ..|+.+++
T Consensus 133 ~-------~~~l~~tilRp~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~~ni 202 (317)
T CHL00194 133 K-------KSGIPYTIFRLAGFFQGLISQYAI-PILEKQPIWITNESTPISYIDTQDAAKFCLKSLSLPE--TKNKTFPL 202 (317)
T ss_pred H-------HcCCCeEEEeecHHhhhhhhhhhh-hhccCCceEecCCCCccCccCHHHHHHHHHHHhcCcc--ccCcEEEe
Confidence 4 248999999998765332211100 0000000000000111234567999999887765322 25899999
Q ss_pred CCCcccc
Q 024752 255 DGGYSVT 261 (263)
Q Consensus 255 dgG~~~~ 261 (263)
.|+..++
T Consensus 203 ~g~~~~s 209 (317)
T CHL00194 203 VGPKSWN 209 (317)
T ss_pred cCCCccC
Confidence 9987654
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=8.3e-16 Score=131.11 Aligned_cols=147 Identities=14% Similarity=0.143 Sum_probs=111.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
+++|||||+|.||++++++|.++| +|+.++|... .+..|++|.+.+.++++. .++|
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-----------------~~~~Dl~d~~~~~~~~~~------~~~D 56 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST-----------------DYCGDFSNPEGVAETVRK------IRPD 56 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-----------------cccCCCCCHHHHHHHHHh------cCCC
Confidence 369999999999999999999999 7888887531 235799999998888763 3689
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc-----------CCCCcc
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA-----------IPMCSI 162 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~~~~~~ 162 (263)
+|||+|+...... ..++.+..+.+|+.++.++++++ ++.+ .++|++||...+.+ ..+...
T Consensus 57 ~Vih~Aa~~~~~~----~~~~~~~~~~~N~~~~~~l~~aa----~~~g-~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~ 127 (299)
T PRK09987 57 VIVNAAAHTAVDK----AESEPEFAQLLNATSVEAIAKAA----NEVG-AWVVHYSTDYVFPGTGDIPWQETDATAPLNV 127 (299)
T ss_pred EEEECCccCCcch----hhcCHHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEccceEECCCCCCCcCCCCCCCCCCH
Confidence 9999999765432 22334667889999999999988 3333 58999999654321 113357
Q ss_pred hhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCc
Q 024752 163 YASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPL 200 (263)
Q Consensus 163 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~ 200 (263)
|+.+|.+.|.+++.+.. +...++|+++..|.
T Consensus 128 Yg~sK~~~E~~~~~~~~-------~~~ilR~~~vyGp~ 158 (299)
T PRK09987 128 YGETKLAGEKALQEHCA-------KHLIFRTSWVYAGK 158 (299)
T ss_pred HHHHHHHHHHHHHHhCC-------CEEEEecceecCCC
Confidence 99999999999875432 34778899888764
|
|
| >KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.7e-15 Score=111.38 Aligned_cols=218 Identities=19% Similarity=0.163 Sum_probs=167.7
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc-CC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF-DG 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~ 90 (263)
.-.+|+|.|+-|.+|.+|++.|..+++.|.-++-.+... . ..-..+..|-+=.|+-+.+++++-+.+ +.
T Consensus 2 sagrVivYGGkGALGSacv~~FkannywV~siDl~eNe~---------A-d~sI~V~~~~swtEQe~~v~~~vg~sL~ge 71 (236)
T KOG4022|consen 2 SAGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQ---------A-DSSILVDGNKSWTEQEQSVLEQVGSSLQGE 71 (236)
T ss_pred CCceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccc---------c-cceEEecCCcchhHHHHHHHHHHHHhhccc
Confidence 346899999999999999999999999998877654321 1 112344556666677777888877765 35
Q ss_pred CccEEEeCCCCCCCCCCCCCC-HHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHH
Q 024752 91 KLNILINNAGTFIPKETTEFT-EEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
++|.++|-||.+..+.....+ ....+-+++..++....-.+....+++. +|-+-..+.-++..+.|++..|+++|+|
T Consensus 72 kvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~--GGLL~LtGAkaAl~gTPgMIGYGMAKaA 149 (236)
T KOG4022|consen 72 KVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKP--GGLLQLTGAKAALGGTPGMIGYGMAKAA 149 (236)
T ss_pred ccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCC--CceeeecccccccCCCCcccchhHHHHH
Confidence 799999999987665433222 2445667788888877777777777655 5666677777788899999999999999
Q ss_pred HHHHHHHHHHHHc--cCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 170 MNQLTKNLACEWA--KDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 170 ~~~~~~~~a~e~~--~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
+..++++++.+-. +.|-.+.+|.|=..+|||.+...++.++. .|.+.+.+++..+-...+..+--
T Consensus 150 VHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~ADfs-------------sWTPL~fi~e~flkWtt~~~RPs 216 (236)
T KOG4022|consen 150 VHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNADFS-------------SWTPLSFISEHFLKWTTETSRPS 216 (236)
T ss_pred HHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCCccc-------------CcccHHHHHHHHHHHhccCCCCC
Confidence 9999999998865 56888999999999999999988766543 45568899999887777777777
Q ss_pred cCcEEEe
Q 024752 248 TGQVICV 254 (263)
Q Consensus 248 ~G~~i~~ 254 (263)
+|..|.+
T Consensus 217 sGsLlqi 223 (236)
T KOG4022|consen 217 SGSLLQI 223 (236)
T ss_pred CCceEEE
Confidence 8887765
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.5e-14 Score=133.58 Aligned_cols=222 Identities=17% Similarity=0.132 Sum_probs=144.0
Q ss_pred EEEEecCCCchHHHHHHHHH--HCCCeEEEeeCCchhHHHHHHHHHhcC-CceEEEeccCCCHHHH--HHHHHHHHhhcC
Q 024752 15 TALVTGGTKGIGYAVVEELA--AFGAIVHTCSRNETELNQRIQEWKSKG-LQVSGSVCDLKIRAQR--EKLMETVSSQFD 89 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~--~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~--~~~~~~~~~~~~ 89 (263)
++|||||+|.||+++++.|+ +.|++|++++|+... ..........+ .++.++.+|+++++.. ...++.+
T Consensus 2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----- 75 (657)
T PRK07201 2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----- 75 (657)
T ss_pred eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-----
Confidence 69999999999999999999 589999999997543 11211111111 4688899999985321 1112222
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC------------
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI------------ 157 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~------------ 157 (263)
.++|++||+|+...... + .....++|+.++.++++++ .+.+..++|++||...+...
T Consensus 76 ~~~D~Vih~Aa~~~~~~----~---~~~~~~~nv~gt~~ll~~a----~~~~~~~~v~~SS~~v~g~~~~~~~e~~~~~~ 144 (657)
T PRK07201 76 GDIDHVVHLAAIYDLTA----D---EEAQRAANVDGTRNVVELA----ERLQAATFHHVSSIAVAGDYEGVFREDDFDEG 144 (657)
T ss_pred cCCCEEEECceeecCCC----C---HHHHHHHHhHHHHHHHHHH----HhcCCCeEEEEeccccccCccCccccccchhh
Confidence 36899999999754321 2 3456789999999998887 44456799999997654211
Q ss_pred -CCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccccc---c-hhHHHHHHhHh---cCC-------
Q 024752 158 -PMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKD---S-NFLEHANRMVL---RTP------- 222 (263)
Q Consensus 158 -~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---~-~~~~~~~~~~~---~~~------- 222 (263)
.....|+.+|...+.+++. ..|+++..++|+.+..+........ . .+......... ..+
T Consensus 145 ~~~~~~Y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (657)
T PRK07201 145 QGLPTPYHRTKFEAEKLVRE------ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGG 218 (657)
T ss_pred cCCCCchHHHHHHHHHHHHH------cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCC
Confidence 1235699999999998863 2489999999999987532211000 0 00011111100 011
Q ss_pred CCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 223 MLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 223 ~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
...+.+.+|+++++..++.. ....|+.+++.++..++
T Consensus 219 ~~~~v~vddva~ai~~~~~~--~~~~g~~~ni~~~~~~s 255 (657)
T PRK07201 219 RTNIVPVDYVADALDHLMHK--DGRDGQTFHLTDPKPQR 255 (657)
T ss_pred eeeeeeHHHHHHHHHHHhcC--cCCCCCEEEeCCCCCCc
Confidence 11245589999999887753 23468999998876543
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.9e-14 Score=129.10 Aligned_cols=224 Identities=15% Similarity=0.099 Sum_probs=146.1
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC---eEEEeeCCchh---HHHHHHHHH---------h-c--------CCceEE
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGA---IVHTCSRNETE---LNQRIQEWK---------S-K--------GLQVSG 66 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~---~V~~~~r~~~~---~~~~~~~~~---------~-~--------~~~~~~ 66 (263)
++||+|+||||+|+||++++++|++.+. +|+++.|.... .+.+..++. + . ..++.+
T Consensus 9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~ 88 (491)
T PLN02996 9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP 88 (491)
T ss_pred hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence 6899999999999999999999997643 67888886532 111111111 0 0 146889
Q ss_pred EeccCCCH-------HHHHHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhh
Q 024752 67 SVCDLKIR-------AQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKS 139 (263)
Q Consensus 67 ~~~D~~~~-------~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 139 (263)
+..|++++ +.++.++ ..+|+|||+|+..... +..+..+++|+.|+.++++++...
T Consensus 89 i~GDl~~~~LGLs~~~~~~~l~--------~~vD~ViH~AA~v~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~--- 150 (491)
T PLN02996 89 VPGDISYDDLGVKDSNLREEMW--------KEIDIVVNLAATTNFD-------ERYDVALGINTLGALNVLNFAKKC--- 150 (491)
T ss_pred EecccCCcCCCCChHHHHHHHH--------hCCCEEEECccccCCc-------CCHHHHHHHHHHHHHHHHHHHHhc---
Confidence 99999843 3333433 3589999999976421 245778999999999999988432
Q ss_pred CCCceEEEEccccccccC---------C----------------------------------------------------
Q 024752 140 AGNGNIIFISSVAGVIAI---------P---------------------------------------------------- 158 (263)
Q Consensus 140 ~~~~~iv~vsS~~~~~~~---------~---------------------------------------------------- 158 (263)
.+..++|++||...+... +
T Consensus 151 ~~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (491)
T PLN02996 151 VKVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLH 230 (491)
T ss_pred CCCCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhC
Confidence 234589999987654210 0
Q ss_pred -CCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccccc-ch--hH-HHHHHhHhcC---------CCC
Q 024752 159 -MCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKD-SN--FL-EHANRMVLRT---------PML 224 (263)
Q Consensus 159 -~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~--~~-~~~~~~~~~~---------~~~ 224 (263)
....|+.||++.|.+++.++ .|+.+..++|+.|..+...+...- +. .. .......... ...
T Consensus 231 ~~pn~Y~~TK~~aE~lv~~~~-----~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~ 305 (491)
T PLN02996 231 GWPNTYVFTKAMGEMLLGNFK-----ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVL 305 (491)
T ss_pred CCCCchHhhHHHHHHHHHHhc-----CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeec
Confidence 11359999999999997542 289999999999988765432211 00 00 0001111111 123
Q ss_pred CCCChhhHHHHHHHHcCCCC-CCccCcEEEeCCC
Q 024752 225 RPGEPNEVSSVVAFLCLSAT-SYVTGQVICVDGG 257 (263)
Q Consensus 225 ~~~~~~~va~~~~~l~s~~~-~~~~G~~i~~dgG 257 (263)
.+.++++++++++..+.... ..-.+.++++.+|
T Consensus 306 D~v~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~ 339 (491)
T PLN02996 306 DVIPADMVVNAMIVAMAAHAGGQGSEIIYHVGSS 339 (491)
T ss_pred ceecccHHHHHHHHHHHHhhccCCCCcEEEecCC
Confidence 45678999999876654321 1124788999988
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.8e-14 Score=136.08 Aligned_cols=184 Identities=15% Similarity=0.122 Sum_probs=131.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
++++||||+|+||++++++|+++|++|++++|+.... ....+.++.+|+++.+++.++++ .+|
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~---------~~~~v~~v~gDL~D~~~l~~al~--------~vD 63 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS---------WPSSADFIAADIRDATAVESAMT--------GAD 63 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh---------cccCceEEEeeCCCHHHHHHHHh--------CCC
Confidence 3699999999999999999999999999999975321 01246788999999998887763 589
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHHHH
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQL 173 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~ 173 (263)
++||+|+.... .+++|+.++.++++++ ++.+.+++|++||.. |.+.+.+
T Consensus 64 ~VVHlAa~~~~-------------~~~vNv~GT~nLLeAa----~~~gvkr~V~iSS~~--------------K~aaE~l 112 (854)
T PRK05865 64 VVAHCAWVRGR-------------NDHINIDGTANVLKAM----AETGTGRIVFTSSGH--------------QPRVEQM 112 (854)
T ss_pred EEEECCCcccc-------------hHHHHHHHHHHHHHHH----HHcCCCeEEEECCcH--------------HHHHHHH
Confidence 99999985321 4678999998887776 555567999999853 8777766
Q ss_pred HHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCC------CCCCChhhHHHHHHHHcCCCCCCc
Q 024752 174 TKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPM------LRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 174 ~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
++ ..|+.+..+.|+.++.+..... ....... ...+. ..+...+|+++++..++.... .
T Consensus 113 l~-------~~gl~~vILRp~~VYGP~~~~~------i~~ll~~-~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~--~ 176 (854)
T PRK05865 113 LA-------DCGLEWVAVRCALIFGRNVDNW------VQRLFAL-PVLPAGYADRVVQVVHSDDAQRLLVRALLDTV--I 176 (854)
T ss_pred HH-------HcCCCEEEEEeceEeCCChHHH------HHHHhcC-ceeccCCCCceEeeeeHHHHHHHHHHHHhCCC--c
Confidence 63 2489999999999998742211 1000000 00111 135778999999887764221 2
Q ss_pred cCcEEEeCCCcccc
Q 024752 248 TGQVICVDGGYSVT 261 (263)
Q Consensus 248 ~G~~i~~dgG~~~~ 261 (263)
.|..+++.+|..++
T Consensus 177 ~ggvyNIgsg~~~S 190 (854)
T PRK05865 177 DSGPVNLAAPGELT 190 (854)
T ss_pred CCCeEEEECCCccc
Confidence 36689998876543
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.60 E-value=4e-14 Score=117.40 Aligned_cols=156 Identities=21% Similarity=0.207 Sum_probs=125.0
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHH---hcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWK---SKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
++.||||||+|.||++.+.+|.++|+.|+++|.-........+.++ ..+..+.++..|+.|.+.++++++..
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~----- 76 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV----- 76 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence 6899999999999999999999999999999865443333333222 23577999999999999999988763
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc-----------C-
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA-----------I- 157 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~- 157 (263)
++|.|+|-|+....+. +.+...+....|+.|+++++..+ ++.+...+|+.||...+.. .
T Consensus 77 -~fd~V~Hfa~~~~vge----S~~~p~~Y~~nNi~gtlnlLe~~----~~~~~~~~V~sssatvYG~p~~ip~te~~~t~ 147 (343)
T KOG1371|consen 77 -KFDAVMHFAALAAVGE----SMENPLSYYHNNIAGTLNLLEVM----KAHNVKALVFSSSATVYGLPTKVPITEEDPTD 147 (343)
T ss_pred -CCceEEeehhhhccch----hhhCchhheehhhhhHHHHHHHH----HHcCCceEEEecceeeecCcceeeccCcCCCC
Confidence 6999999999887765 55666888999999999999887 5555678999888765421 1
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHc
Q 024752 158 PMCSIYASSKVAMNQLTKNLACEWA 182 (263)
Q Consensus 158 ~~~~~Y~~sK~a~~~~~~~~a~e~~ 182 (263)
.+...|+.+|.+++.+..++...+.
T Consensus 148 ~p~~pyg~tK~~iE~i~~d~~~~~~ 172 (343)
T KOG1371|consen 148 QPTNPYGKTKKAIEEIIHDYNKAYG 172 (343)
T ss_pred CCCCcchhhhHHHHHHHHhhhcccc
Confidence 2567899999999999999887664
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.60 E-value=1e-13 Score=109.66 Aligned_cols=172 Identities=17% Similarity=0.084 Sum_probs=123.8
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCccEE
Q 024752 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNIL 95 (263)
Q Consensus 16 vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~l 95 (263)
|+|+||+|.+|+.++++|.++|++|.++.|++++.++ ..++..+.+|+.|++++.+++ ...|++
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--------~~~~~~~~~d~~d~~~~~~al--------~~~d~v 64 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--------SPGVEIIQGDLFDPDSVKAAL--------KGADAV 64 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--------CTTEEEEESCTTCHHHHHHHH--------TTSSEE
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--------ccccccceeeehhhhhhhhhh--------hhcchh
Confidence 7899999999999999999999999999999997766 457899999999998888877 468999
Q ss_pred EeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCC---------cchhhH
Q 024752 96 INNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMC---------SIYASS 166 (263)
Q Consensus 96 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~---------~~Y~~s 166 (263)
|+++|.... + ...++.+++.+++.+..++|++||.......+.. ..|...
T Consensus 65 i~~~~~~~~--------~-------------~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (183)
T PF13460_consen 65 IHAAGPPPK--------D-------------VDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARD 123 (183)
T ss_dssp EECCHSTTT--------H-------------HHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHH
T ss_pred hhhhhhhcc--------c-------------ccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHH
Confidence 999975322 1 3445555666677777899999998766543331 245555
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHc
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC 240 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~ 240 (263)
|...+.+. ...+++...++|+++..+.......... .......+.+.+|+|++++.++
T Consensus 124 ~~~~e~~~-------~~~~~~~~ivrp~~~~~~~~~~~~~~~~---------~~~~~~~~i~~~DvA~~~~~~l 181 (183)
T PF13460_consen 124 KREAEEAL-------RESGLNWTIVRPGWIYGNPSRSYRLIKE---------GGPQGVNFISREDVAKAIVEAL 181 (183)
T ss_dssp HHHHHHHH-------HHSTSEEEEEEESEEEBTTSSSEEEESS---------TSTTSHCEEEHHHHHHHHHHHH
T ss_pred HHHHHHHH-------HhcCCCEEEEECcEeEeCCCcceeEEec---------cCCCCcCcCCHHHHHHHHHHHh
Confidence 55444333 2348999999999998775331111000 0111224567899999988765
|
... |
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.58 E-value=7e-14 Score=119.64 Aligned_cols=230 Identities=18% Similarity=0.176 Sum_probs=155.5
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCC--CeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
.+..+++||||+|.+|++++++|.+++ ..+.+++..+....-...+......++.++.+|+.+..++.+++.
T Consensus 2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~------ 75 (361)
T KOG1430|consen 2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQ------ 75 (361)
T ss_pred CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhcc------
Confidence 357899999999999999999999998 689998887752211111111134668899999999988888774
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc------------
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA------------ 156 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~------------ 156 (263)
.. .++|+|+...+.- -..+.+..+++|+.|+.+++.++ .+.+..++|++||.....+
T Consensus 76 --~~-~Vvh~aa~~~~~~----~~~~~~~~~~vNV~gT~nvi~~c----~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p 144 (361)
T KOG1430|consen 76 --GA-VVVHCAASPVPDF----VENDRDLAMRVNVNGTLNVIEAC----KELGVKRLIYTSSAYVVFGGEPIINGDESLP 144 (361)
T ss_pred --Cc-eEEEeccccCccc----cccchhhheeecchhHHHHHHHH----HHhCCCEEEEecCceEEeCCeecccCCCCCC
Confidence 45 7777777654432 23357889999999999999888 6667789999999876542
Q ss_pred CCC--CcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcC----CCCCCCChh
Q 024752 157 IPM--CSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRT----PMLRPGEPN 230 (263)
Q Consensus 157 ~~~--~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 230 (263)
.|. ...|+.||+-.|.+++.... ..+....+++|-.|+.|.-+...+.-.-......+.... -...+...+
T Consensus 145 ~p~~~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~ 221 (361)
T KOG1430|consen 145 YPLKHIDPYGESKALAEKLVLEANG---SDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGDGENLNDFTYGE 221 (361)
T ss_pred CccccccccchHHHHHHHHHHHhcC---CCCeeEEEEccccccCCCCccccHHHHHHHHccCceEEeeccccccceEEec
Confidence 232 35899999999999987654 446899999999999887654332110000001111111 111122244
Q ss_pred hHHHH--HHHHcC-CCCCCccCcEEEeCCCccc
Q 024752 231 EVSSV--VAFLCL-SATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 231 ~va~~--~~~l~s-~~~~~~~G~~i~~dgG~~~ 260 (263)
.++.+ +...+. +.+..++||.+.+..|..+
T Consensus 222 Nva~ahilA~~aL~~~~~~~~Gq~yfI~d~~p~ 254 (361)
T KOG1430|consen 222 NVAWAHILAARALLDKSPSVNGQFYFITDDTPV 254 (361)
T ss_pred hhHHHHHHHHHHHHhcCCccCceEEEEeCCCcc
Confidence 44444 222222 2667789999999988764
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.9e-13 Score=114.56 Aligned_cols=197 Identities=18% Similarity=0.118 Sum_probs=118.8
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
.+++|||||+|+||+++++.|+++|++|+... .|+++.+.+...++. .++
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~------------------------~~~~~~~~v~~~l~~------~~~ 58 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS------------------------GRLENRASLEADIDA------VKP 58 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCEEEEec------------------------CccCCHHHHHHHHHh------cCC
Confidence 36899999999999999999999999987432 234455444444432 368
Q ss_pred cEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccc-----------------
Q 024752 93 NILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVI----------------- 155 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~----------------- 155 (263)
|+|||+||....... +...++....+++|+.++.++++++. +.+. +.+++||...+.
T Consensus 59 D~ViH~Aa~~~~~~~-~~~~~~p~~~~~~Nv~gt~~ll~aa~----~~gv-~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~ 132 (298)
T PLN02778 59 THVFNAAGVTGRPNV-DWCESHKVETIRANVVGTLTLADVCR----ERGL-VLTNYATGCIFEYDDAHPLGSGIGFKEED 132 (298)
T ss_pred CEEEECCcccCCCCc-hhhhhCHHHHHHHHHHHHHHHHHHHH----HhCC-CEEEEecceEeCCCCCCCcccCCCCCcCC
Confidence 999999998653211 11234557789999999999999983 3333 455555433210
Q ss_pred -cCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCC-CCCCChhhHH
Q 024752 156 -AIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPM-LRPGEPNEVS 233 (263)
Q Consensus 156 -~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va 233 (263)
+.+....|+.+|.+.+.+++.++.. .++|+ ++...+-.. ....+............. ..+...+|++
T Consensus 133 ~p~~~~s~Yg~sK~~~E~~~~~y~~~---~~lr~-----~~~~~~~~~---~~~~fi~~~~~~~~~~~~~~s~~yv~D~v 201 (298)
T PLN02778 133 TPNFTGSFYSKTKAMVEELLKNYENV---CTLRV-----RMPISSDLS---NPRNFITKITRYEKVVNIPNSMTILDELL 201 (298)
T ss_pred CCCCCCCchHHHHHHHHHHHHHhhcc---EEeee-----cccCCcccc---cHHHHHHHHHcCCCeeEcCCCCEEHHHHH
Confidence 0112357999999999999876532 23443 221111000 000111111111110111 2356788999
Q ss_pred HHHHHHcCCCCCCccCcEEEeCCCccc
Q 024752 234 SVVAFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 234 ~~~~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
++++.++... .+ ..+++.+|..+
T Consensus 202 ~al~~~l~~~---~~-g~yNigs~~~i 224 (298)
T PLN02778 202 PISIEMAKRN---LT-GIYNFTNPGVV 224 (298)
T ss_pred HHHHHHHhCC---CC-CeEEeCCCCcc
Confidence 9888776432 23 49999877654
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.56 E-value=5.8e-13 Score=110.28 Aligned_cols=180 Identities=15% Similarity=0.105 Sum_probs=133.7
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCccEE
Q 024752 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNIL 95 (263)
Q Consensus 16 vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~l 95 (263)
+||||++|-+|.+|++.|. .+..|+.++|.. +|++|.+.+.+++.+ -++|+|
T Consensus 3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~---------------------~Ditd~~~v~~~i~~------~~PDvV 54 (281)
T COG1091 3 ILITGANGQLGTELRRALP-GEFEVIATDRAE---------------------LDITDPDAVLEVIRE------TRPDVV 54 (281)
T ss_pred EEEEcCCChHHHHHHHHhC-CCceEEeccCcc---------------------ccccChHHHHHHHHh------hCCCEE
Confidence 9999999999999999999 778999988864 799999999999986 389999
Q ss_pred EeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCC-----------CCcchh
Q 024752 96 INNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIP-----------MCSIYA 164 (263)
Q Consensus 96 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-----------~~~~Y~ 164 (263)
||+|++..... -+.+-+..+.+|..++.++++++ ++ -+.++|++|+...+.|.. +...|+
T Consensus 55 In~AAyt~vD~----aE~~~e~A~~vNa~~~~~lA~aa----~~-~ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG 125 (281)
T COG1091 55 INAAAYTAVDK----AESEPELAFAVNATGAENLARAA----AE-VGARLVHISTDYVFDGEKGGPYKETDTPNPLNVYG 125 (281)
T ss_pred EECcccccccc----ccCCHHHHHHhHHHHHHHHHHHH----HH-hCCeEEEeecceEecCCCCCCCCCCCCCCChhhhh
Confidence 99999976654 33446788999999999999998 33 357999999877654332 346799
Q ss_pred hHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHH-hHhc-------CCCCCCCChhhHHHHH
Q 024752 165 SSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANR-MVLR-------TPMLRPGEPNEVSSVV 236 (263)
Q Consensus 165 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~va~~~ 236 (263)
.||.+.|..++... -+...++..|+......++. ..+.+ .... --.+.+...+|+|+++
T Consensus 126 ~sKl~GE~~v~~~~-------~~~~I~Rtswv~g~~g~nFv------~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i 192 (281)
T COG1091 126 RSKLAGEEAVRAAG-------PRHLILRTSWVYGEYGNNFV------KTMLRLAKEGKELKVVDDQYGSPTYTEDLADAI 192 (281)
T ss_pred HHHHHHHHHHHHhC-------CCEEEEEeeeeecCCCCCHH------HHHHHHhhcCCceEEECCeeeCCccHHHHHHHH
Confidence 99999999998653 34555666777655432221 11111 1111 1235567789999999
Q ss_pred HHHcCCCCC
Q 024752 237 AFLCLSATS 245 (263)
Q Consensus 237 ~~l~s~~~~ 245 (263)
..|+.....
T Consensus 193 ~~ll~~~~~ 201 (281)
T COG1091 193 LELLEKEKE 201 (281)
T ss_pred HHHHhcccc
Confidence 987765543
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.56 E-value=5.3e-14 Score=119.14 Aligned_cols=198 Identities=21% Similarity=0.182 Sum_probs=127.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
+++||||++|.||.++.+.|.++|+.|+.++|. ..|++|.+++.+++.+. ++|
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~---------------------~~dl~d~~~~~~~~~~~------~pd 53 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRS---------------------DLDLTDPEAVAKLLEAF------KPD 53 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT---------------------CS-TTSHHHHHHHHHHH--------S
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch---------------------hcCCCCHHHHHHHHHHh------CCC
Confidence 379999999999999999999999999999887 47999999999888764 699
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC-----------CCCcc
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI-----------PMCSI 162 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----------~~~~~ 162 (263)
+|||+||+..+.. -.++.+..+.+|+.++..+++.+ .+. +.++|++||...+.+. .+...
T Consensus 54 ~Vin~aa~~~~~~----ce~~p~~a~~iN~~~~~~la~~~----~~~-~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~ 124 (286)
T PF04321_consen 54 VVINCAAYTNVDA----CEKNPEEAYAINVDATKNLAEAC----KER-GARLIHISTDYVFDGDKGGPYTEDDPPNPLNV 124 (286)
T ss_dssp EEEE------HHH----HHHSHHHHHHHHTHHHHHHHHHH----HHC-T-EEEEEEEGGGS-SSTSSSB-TTS----SSH
T ss_pred eEeccceeecHHh----hhhChhhhHHHhhHHHHHHHHHH----HHc-CCcEEEeeccEEEcCCcccccccCCCCCCCCH
Confidence 9999999864322 23456778999999999999998 333 5799999998655332 13467
Q ss_pred hhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHH-hHhcC-------CCCCCCChhhHHH
Q 024752 163 YASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANR-MVLRT-------PMLRPGEPNEVSS 234 (263)
Q Consensus 163 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~~~~~va~ 234 (263)
|+-+|...|..++.. .+ ....++++++..+-. ..+..+... ..... ....+...+|+|+
T Consensus 125 YG~~K~~~E~~v~~~----~~---~~~IlR~~~~~g~~~------~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~ 191 (286)
T PF04321_consen 125 YGRSKLEGEQAVRAA----CP---NALILRTSWVYGPSG------RNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLAR 191 (286)
T ss_dssp HHHHHHHHHHHHHHH-----S---SEEEEEE-SEESSSS------SSHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHH
T ss_pred HHHHHHHHHHHHHHh----cC---CEEEEecceecccCC------CchhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHH
Confidence 999999999988762 12 667788888877721 122222111 11111 1233456899999
Q ss_pred HHHHHcCCCC-CCccCcEEEeCCCccc
Q 024752 235 VVAFLCLSAT-SYVTGQVICVDGGYSV 260 (263)
Q Consensus 235 ~~~~l~s~~~-~~~~G~~i~~dgG~~~ 260 (263)
.+..++.... ..-.+.++++.|...+
T Consensus 192 ~i~~l~~~~~~~~~~~Giyh~~~~~~~ 218 (286)
T PF04321_consen 192 VILELIEKNLSGASPWGIYHLSGPERV 218 (286)
T ss_dssp HHHHHHHHHHH-GGG-EEEE---BS-E
T ss_pred HHHHHHHhcccccccceeEEEecCccc
Confidence 9988875331 1123677887776544
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function | Back alignment and domain information |
|---|
Probab=99.55 E-value=7.1e-13 Score=110.69 Aligned_cols=184 Identities=14% Similarity=0.105 Sum_probs=150.0
Q ss_pred CCEEEEecC-CCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC-
Q 024752 13 GMTALVTGG-TKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG- 90 (263)
Q Consensus 13 ~k~vlVtGa-s~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~- 90 (263)
.++|+|.|. +.-|++.+|.-|-++|+.|+++..+.++.+....+- ...+..+..|..++.++...+.+..+.+..
T Consensus 3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~---~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p 79 (299)
T PF08643_consen 3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED---RPDIRPLWLDDSDPSSIHASLSRFASLLSRP 79 (299)
T ss_pred eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc---CCCCCCcccCCCCCcchHHHHHHHHHHhcCC
Confidence 478999995 789999999999999999999999987655554432 334777788888887877777777665511
Q ss_pred ------------CccEEEeCCCCC-CCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC--CCceEEEEc-ccccc
Q 024752 91 ------------KLNILINNAGTF-IPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA--GNGNIIFIS-SVAGV 154 (263)
Q Consensus 91 ------------~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~iv~vs-S~~~~ 154 (263)
.+..+|...... ..++++.++.++|.+.++.|++.++.+++.++|+|+.+ ++.+||.+. |+.+.
T Consensus 80 ~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~ss 159 (299)
T PF08643_consen 80 HVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISSS 159 (299)
T ss_pred CCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhhc
Confidence 345555554433 45789999999999999999999999999999999982 345666555 77777
Q ss_pred ccCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCC
Q 024752 155 IAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTP 199 (263)
Q Consensus 155 ~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~ 199 (263)
...|...+-.....++.+|+++|++|+.++||.|..+..|.++-.
T Consensus 160 l~~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~ 204 (299)
T PF08643_consen 160 LNPPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIG 204 (299)
T ss_pred cCCCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccc
Confidence 888899999999999999999999999999999999999998865
|
One of the proteins P32792 from SWISSPROT has been localised to the mitochondria []. |
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.3e-13 Score=113.09 Aligned_cols=164 Identities=18% Similarity=0.169 Sum_probs=100.7
Q ss_pred EecCCCchHHHHHHHHHHCCC--eEEEeeCCchh---HHHHHHHHH----------hcCCceEEEeccCCCHHH-H-HHH
Q 024752 18 VTGGTKGIGYAVVEELAAFGA--IVHTCSRNETE---LNQRIQEWK----------SKGLQVSGSVCDLKIRAQ-R-EKL 80 (263)
Q Consensus 18 VtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~---~~~~~~~~~----------~~~~~~~~~~~D~~~~~~-~-~~~ 80 (263)
||||+|++|.++..+|++.+. +|+++.|.... .+.+.+.+. ....++.++..|++++.- + ...
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999976 89999998743 222222221 125689999999998541 1 122
Q ss_pred HHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC---
Q 024752 81 METVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI--- 157 (263)
Q Consensus 81 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~--- 157 (263)
++++. ..+|++||||+...... .+++..++|+.|+.++++.+. +.+..+++++||.......
T Consensus 81 ~~~L~----~~v~~IiH~Aa~v~~~~-------~~~~~~~~NV~gt~~ll~la~----~~~~~~~~~iSTa~v~~~~~~~ 145 (249)
T PF07993_consen 81 YQELA----EEVDVIIHCAASVNFNA-------PYSELRAVNVDGTRNLLRLAA----QGKRKRFHYISTAYVAGSRPGT 145 (249)
T ss_dssp HHHHH----HH--EEEE--SS-SBS--------S--EEHHHHHHHHHHHHHHHT----SSS---EEEEEEGGGTTS-TTT
T ss_pred hhccc----cccceeeecchhhhhcc-------cchhhhhhHHHHHHHHHHHHH----hccCcceEEeccccccCCCCCc
Confidence 23332 35899999999765432 345578899999999999983 3334599999993221110
Q ss_pred -----------------CCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCC
Q 024752 158 -----------------PMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTP 199 (263)
Q Consensus 158 -----------------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~ 199 (263)
.....|..||..-|.+++..+.+. |+.+..++||.|-..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~---g~p~~I~Rp~~i~g~ 201 (249)
T PF07993_consen 146 IEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRH---GLPVTIYRPGIIVGD 201 (249)
T ss_dssp --SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH------EEEEEE-EEE-S
T ss_pred ccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcC---CceEEEEecCccccc
Confidence 123579999999999999887653 899999999999763
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.50 E-value=4.8e-13 Score=108.76 Aligned_cols=227 Identities=15% Similarity=0.039 Sum_probs=155.4
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHC--CCeEEEeeCCchhH-HHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAF--GAIVHTCSRNETEL-NQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~--g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
.++.|.++|||+.|.||.+.+..++.. .++.+.++.-.-.. ....+++ ....+..++..|+.+...+.-.+.+
T Consensus 3 ~~~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~-~n~p~ykfv~~di~~~~~~~~~~~~--- 78 (331)
T KOG0747|consen 3 TYKEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPV-RNSPNYKFVEGDIADADLVLYLFET--- 78 (331)
T ss_pred CCccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhh-ccCCCceEeeccccchHHHHhhhcc---
Confidence 345599999999999999999998875 34444443321111 1122222 1235678899999988777766653
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc----------
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA---------- 156 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~---------- 156 (263)
.++|.|+|.|+...... +.-+--...+.|++++..+++..+... +-.++|++|+...+..
T Consensus 79 ---~~id~vihfaa~t~vd~----s~~~~~~~~~nnil~t~~Lle~~~~sg---~i~~fvhvSTdeVYGds~~~~~~~E~ 148 (331)
T KOG0747|consen 79 ---EEIDTVIHFAAQTHVDR----SFGDSFEFTKNNILSTHVLLEAVRVSG---NIRRFVHVSTDEVYGDSDEDAVVGEA 148 (331)
T ss_pred ---CchhhhhhhHhhhhhhh----hcCchHHHhcCCchhhhhHHHHHHhcc---CeeEEEEecccceecCcccccccccc
Confidence 68999999999875533 222234457889999999999985443 3469999999765421
Q ss_pred --CCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhH------hcCCCCCCCC
Q 024752 157 --IPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMV------LRTPMLRPGE 228 (263)
Q Consensus 157 --~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 228 (263)
..+..+|+++|+|.+++.+++...| |+.+..++-+.|+.|.....-.-+.+........ .......+..
T Consensus 149 s~~nPtnpyAasKaAaE~~v~Sy~~sy---~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~ 225 (331)
T KOG0747|consen 149 SLLNPTNPYAASKAAAEMLVRSYGRSY---GLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLY 225 (331)
T ss_pred ccCCCCCchHHHHHHHHHHHHHHhhcc---CCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEe
Confidence 1234679999999999999998877 8999999999999998765433333332111111 1122344667
Q ss_pred hhhHHHHHHHHcCCCCCCccCcEEEeCC
Q 024752 229 PNEVSSVVAFLCLSATSYVTGQVICVDG 256 (263)
Q Consensus 229 ~~~va~~~~~l~s~~~~~~~G~~i~~dg 256 (263)
.+|+++++-..+-... .|+.+|+.-
T Consensus 226 veD~~ea~~~v~~Kg~---~geIYNIgt 250 (331)
T KOG0747|consen 226 VEDVSEAFKAVLEKGE---LGEIYNIGT 250 (331)
T ss_pred HHHHHHHHHHHHhcCC---ccceeeccC
Confidence 9999999887776543 489988864
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.50 E-value=6.8e-12 Score=127.20 Aligned_cols=228 Identities=16% Similarity=0.154 Sum_probs=145.8
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCC----CeEEEeeCCchhHHH---HHHHHHhc-------CCceEEEeccCCCHHHH-
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFG----AIVHTCSRNETELNQ---RIQEWKSK-------GLQVSGSVCDLKIRAQR- 77 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g----~~V~~~~r~~~~~~~---~~~~~~~~-------~~~~~~~~~D~~~~~~~- 77 (263)
.++|+|||++|+||.++++.|++.+ .+|+...|+....+. ..+..... ..++.++.+|++++.-.
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence 5889999999999999999999987 789999997544322 22222111 13688899999864210
Q ss_pred -HHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc
Q 024752 78 -EKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA 156 (263)
Q Consensus 78 -~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~ 156 (263)
...++++. ..+|++||||+..... .+ +......|+.|+.++++.+. +.+..+++++||...+..
T Consensus 1051 ~~~~~~~l~----~~~d~iiH~Aa~~~~~----~~---~~~~~~~nv~gt~~ll~~a~----~~~~~~~v~vSS~~v~~~ 1115 (1389)
T TIGR03443 1051 SDEKWSDLT----NEVDVIIHNGALVHWV----YP---YSKLRDANVIGTINVLNLCA----EGKAKQFSFVSSTSALDT 1115 (1389)
T ss_pred CHHHHHHHH----hcCCEEEECCcEecCc----cC---HHHHHHhHHHHHHHHHHHHH----hCCCceEEEEeCeeecCc
Confidence 11122221 4689999999976421 12 33455689999999999873 334568999999754411
Q ss_pred -----------------C-----------CCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccc
Q 024752 157 -----------------I-----------PMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDS 208 (263)
Q Consensus 157 -----------------~-----------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~ 208 (263)
. .....|+.||.+.+.+++.++. .|+.+..++||.|..+.........
T Consensus 1116 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~~~~ 1191 (1389)
T TIGR03443 1116 EYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RGLRGCIVRPGYVTGDSKTGATNTD 1191 (1389)
T ss_pred ccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CCCCEEEECCCccccCCCcCCCCch
Confidence 0 0124599999999999886533 4899999999999876443322222
Q ss_pred hhHHHHHHh---HhcCC----CCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCcc
Q 024752 209 NFLEHANRM---VLRTP----MLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYS 259 (263)
Q Consensus 209 ~~~~~~~~~---~~~~~----~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~ 259 (263)
.+.....+. ....| ...+.+.++++++++.++........+..+++.++..
T Consensus 1192 ~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~ 1249 (1389)
T TIGR03443 1192 DFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPR 1249 (1389)
T ss_pred hHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCC
Confidence 221111111 01122 1346679999999988765432223356777777644
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.4e-12 Score=109.04 Aligned_cols=214 Identities=16% Similarity=0.077 Sum_probs=122.1
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCccEE
Q 024752 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNIL 95 (263)
Q Consensus 16 vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~l 95 (263)
+|||||+|.||.++++.|++.|++|++++|+......... .. ..|+.. .. ..+.+ ..+|+|
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--------~~--~~~~~~-~~-------~~~~~-~~~D~V 61 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW--------EG--YKPWAP-LA-------ESEAL-EGADAV 61 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc--------ee--eecccc-cc-------hhhhc-CCCCEE
Confidence 6899999999999999999999999999998865432110 00 112221 11 11223 569999
Q ss_pred EeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCC--ceEEEEccccccccC----------C-CCcc
Q 024752 96 INNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGN--GNIIFISSVAGVIAI----------P-MCSI 162 (263)
Q Consensus 96 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~iv~vsS~~~~~~~----------~-~~~~ 162 (263)
||+||..... ...+.+.....+++|+.++.++++++ ++.+. ..+|+.|+...+... + +...
T Consensus 62 vh~a~~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~ 135 (292)
T TIGR01777 62 INLAGEPIAD--KRWTEERKQEIRDSRIDTTRALVEAI----AAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDF 135 (292)
T ss_pred EECCCCCccc--ccCCHHHHHHHHhcccHHHHHHHHHH----HhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCCh
Confidence 9999975331 12344566778899999999888888 44332 234444443211100 0 1112
Q ss_pred hhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHH--HHhHhcCCCCCCCChhhHHHHHHHHc
Q 024752 163 YASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHA--NRMVLRTPMLRPGEPNEVSSVVAFLC 240 (263)
Q Consensus 163 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~va~~~~~l~ 240 (263)
|...+...+...+ .+...++.+..++|+.+..+............... ...........+...+|+++++..++
T Consensus 136 ~~~~~~~~e~~~~----~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l 211 (292)
T TIGR01777 136 LAELCRDWEEAAQ----AAEDLGTRVVLLRTGIVLGPKGGALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFAL 211 (292)
T ss_pred HHHHHHHHHHHhh----hchhcCCceEEEeeeeEECCCcchhHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHHHh
Confidence 3333333333332 22345899999999999877421110000000000 00001112235677999999998887
Q ss_pred CCCCCCccCcEEEeCCCcccc
Q 024752 241 LSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 241 s~~~~~~~G~~i~~dgG~~~~ 261 (263)
..... +..+++.++..++
T Consensus 212 ~~~~~---~g~~~~~~~~~~s 229 (292)
T TIGR01777 212 ENASI---SGPVNATAPEPVR 229 (292)
T ss_pred cCccc---CCceEecCCCccC
Confidence 54322 3468887766543
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.8e-12 Score=108.56 Aligned_cols=200 Identities=11% Similarity=0.023 Sum_probs=122.0
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCccE
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNI 94 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 94 (263)
+++||||+|.+|++++++|.++|++|.++.|++++... ..+..+.+|+.|++++..+++.... ..+.+|.
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~---------~~~~~~~~d~~d~~~l~~a~~~~~~-~~g~~d~ 70 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG---------PNEKHVKFDWLDEDTWDNPFSSDDG-MEPEISA 70 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC---------CCCccccccCCCHHHHHHHHhcccC-cCCceeE
Confidence 38999999999999999999999999999999875321 2345667899999999998865322 2123899
Q ss_pred EEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHHHHH
Q 024752 95 LINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLT 174 (263)
Q Consensus 95 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~~ 174 (263)
++++++... +. .+ ..+.+++.+++.+-.+||++||.....+.+ .+...+.+.
T Consensus 71 v~~~~~~~~-------~~--~~------------~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~~-------~~~~~~~~l 122 (285)
T TIGR03649 71 VYLVAPPIP-------DL--AP------------PMIKFIDFARSKGVRRFVLLSASIIEKGGP-------AMGQVHAHL 122 (285)
T ss_pred EEEeCCCCC-------Ch--hH------------HHHHHHHHHHHcCCCEEEEeeccccCCCCc-------hHHHHHHHH
Confidence 999887421 10 00 112334444666678999999865433211 222222222
Q ss_pred HHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHh-HhcCCCCCCCChhhHHHHHHHHcCCCCCCccCcEEE
Q 024752 175 KNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRM-VLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVIC 253 (263)
Q Consensus 175 ~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~ 253 (263)
+. ..|+....++|+++..++....... ...+..... ........+.+++|+++++..++.+.. ..|+.++
T Consensus 123 ~~------~~gi~~tilRp~~f~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~--~~~~~~~ 193 (285)
T TIGR03649 123 DS------LGGVEYTVLRPTWFMENFSEEFHVE-AIRKENKIYSATGDGKIPFVSADDIARVAYRALTDKV--APNTDYV 193 (285)
T ss_pred Hh------ccCCCEEEEeccHHhhhhccccccc-ccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCCC--cCCCeEE
Confidence 21 1389999999998876543211100 000000000 001112346789999999887776432 2366677
Q ss_pred eCCCcccc
Q 024752 254 VDGGYSVT 261 (263)
Q Consensus 254 ~dgG~~~~ 261 (263)
+-|+..++
T Consensus 194 l~g~~~~s 201 (285)
T TIGR03649 194 VLGPELLT 201 (285)
T ss_pred eeCCccCC
Confidence 76665443
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.44 E-value=3e-12 Score=104.26 Aligned_cols=213 Identities=16% Similarity=0.064 Sum_probs=148.9
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHH--H--HHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN--Q--RIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~--~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
+|++||||-+|--|..+++.|++.|+.|..+.|...... . +.+.-...+.++..+.+|++|...+.++++++
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v---- 77 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV---- 77 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc----
Confidence 699999999999999999999999999999988743221 1 11111122445888999999999999999875
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccc-----------cC
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVI-----------AI 157 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-----------~~ 157 (263)
.+|-++|.|+.++.+. +.++.+...+++.+|+.+++.++.-.- .+.-|+..-||..-+- +.
T Consensus 78 --~PdEIYNLaAQS~V~v----SFe~P~~T~~~~~iGtlrlLEaiR~~~--~~~~rfYQAStSE~fG~v~~~pq~E~TPF 149 (345)
T COG1089 78 --QPDEIYNLAAQSHVGV----SFEQPEYTADVDAIGTLRLLEAIRILG--EKKTRFYQASTSELYGLVQEIPQKETTPF 149 (345)
T ss_pred --Cchhheeccccccccc----cccCcceeeeechhHHHHHHHHHHHhC--CcccEEEecccHHhhcCcccCccccCCCC
Confidence 7899999999987654 777788899999999999999974332 2235676666644321 34
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHc---cCCcEEEEEecCcccCCccccccccchhHHHHHHhH----------hcCCCC
Q 024752 158 PMCSIYASSKVAMNQLTKNLACEWA---KDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMV----------LRTPML 224 (263)
Q Consensus 158 ~~~~~Y~~sK~a~~~~~~~~a~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~----------~~~~~~ 224 (263)
.+.++|+++|.....++..++..|. ..||-+|.-+|. ....+-...+.....+.. +.....
T Consensus 150 yPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~------Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkR 223 (345)
T COG1089 150 YPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPL------RGETFVTRKITRAVARIKLGLQDKLYLGNLDAKR 223 (345)
T ss_pred CCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCC------CccceehHHHHHHHHHHHccccceEEeccccccc
Confidence 4668899999999999999988763 456666665554 222222212211111111 122345
Q ss_pred CCCChhhHHHHHHHHcCCC
Q 024752 225 RPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 225 ~~~~~~~va~~~~~l~s~~ 243 (263)
.|+...|.+++...++..+
T Consensus 224 DWG~A~DYVe~mwlmLQq~ 242 (345)
T COG1089 224 DWGHAKDYVEAMWLMLQQE 242 (345)
T ss_pred cccchHHHHHHHHHHHccC
Confidence 6888999999877666543
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.1e-11 Score=109.31 Aligned_cols=202 Identities=19% Similarity=0.239 Sum_probs=126.1
Q ss_pred CCCCEEEEe----cCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHH-------HHHHHhcCCceEEEeccCCCHHHHHH
Q 024752 11 LKGMTALVT----GGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR-------IQEWKSKGLQVSGSVCDLKIRAQREK 79 (263)
Q Consensus 11 ~~~k~vlVt----Gas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~~~~~~~~D~~~~~~~~~ 79 (263)
...++|||| ||+|.||+++++.|++.|++|++++|+....... ..++.. ..+.++.+|+++ +.+
T Consensus 50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~v~~v~~D~~d---~~~ 124 (378)
T PLN00016 50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSS--AGVKTVWGDPAD---VKS 124 (378)
T ss_pred cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhh--cCceEEEecHHH---HHh
Confidence 345789999 9999999999999999999999999987653221 112221 236778888865 333
Q ss_pred HHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCC
Q 024752 80 LMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPM 159 (263)
Q Consensus 80 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~ 159 (263)
++. . ..+|+|||+++. +. .+...+++++ ++.+-.++|++||...+.....
T Consensus 125 ~~~----~--~~~d~Vi~~~~~---------~~-----------~~~~~ll~aa----~~~gvkr~V~~SS~~vyg~~~~ 174 (378)
T PLN00016 125 KVA----G--AGFDVVYDNNGK---------DL-----------DEVEPVADWA----KSPGLKQFLFCSSAGVYKKSDE 174 (378)
T ss_pred hhc----c--CCccEEEeCCCC---------CH-----------HHHHHHHHHH----HHcCCCEEEEEccHhhcCCCCC
Confidence 321 1 468999999762 11 1223344443 5556679999999765432110
Q ss_pred --------CcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcC----C-----
Q 024752 160 --------CSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRT----P----- 222 (263)
Q Consensus 160 --------~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~----~----- 222 (263)
..++. +|...+.+.+ ..++.+..++|+.+..+...... ...+. ....... +
T Consensus 175 ~p~~E~~~~~p~~-sK~~~E~~l~-------~~~l~~~ilRp~~vyG~~~~~~~-~~~~~---~~~~~~~~i~~~g~g~~ 242 (378)
T PLN00016 175 PPHVEGDAVKPKA-GHLEVEAYLQ-------KLGVNWTSFRPQYIYGPGNNKDC-EEWFF---DRLVRGRPVPIPGSGIQ 242 (378)
T ss_pred CCCCCCCcCCCcc-hHHHHHHHHH-------HcCCCeEEEeceeEECCCCCCch-HHHHH---HHHHcCCceeecCCCCe
Confidence 11122 7888876654 24899999999999987532210 00011 1111111 1
Q ss_pred CCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 223 MLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 223 ~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
...+...+|+++++..++... ...|+.+++.++..++
T Consensus 243 ~~~~i~v~Dva~ai~~~l~~~--~~~~~~yni~~~~~~s 279 (378)
T PLN00016 243 LTQLGHVKDLASMFALVVGNP--KAAGQIFNIVSDRAVT 279 (378)
T ss_pred eeceecHHHHHHHHHHHhcCc--cccCCEEEecCCCccC
Confidence 123566899999998777542 2357999998876543
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.9e-11 Score=103.89 Aligned_cols=165 Identities=19% Similarity=0.169 Sum_probs=120.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHC-CCeEEEeeCCch---hHHHHHHHHH-------hcCCceEEEeccCCCH------HH
Q 024752 14 MTALVTGGTKGIGYAVVEELAAF-GAIVHTCSRNET---ELNQRIQEWK-------SKGLQVSGSVCDLKIR------AQ 76 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~-g~~V~~~~r~~~---~~~~~~~~~~-------~~~~~~~~~~~D~~~~------~~ 76 (263)
+++++|||+|++|..+..+|..+ .++|++..|-+. ..+++.+.+. ....++..+..|++.+ ..
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 57999999999999999998865 569999888654 2223333332 2356799999999842 23
Q ss_pred HHHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc
Q 024752 77 REKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA 156 (263)
Q Consensus 77 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~ 156 (263)
.+++. ..+|.+|||++..+.- ..+.+....|+.|+..+++.+ ...+.+.+.+|||++....
T Consensus 81 ~~~La--------~~vD~I~H~gA~Vn~v-------~pYs~L~~~NVlGT~evlrLa----~~gk~Kp~~yVSsisv~~~ 141 (382)
T COG3320 81 WQELA--------ENVDLIIHNAALVNHV-------FPYSELRGANVLGTAEVLRLA----ATGKPKPLHYVSSISVGET 141 (382)
T ss_pred HHHHh--------hhcceEEecchhhccc-------CcHHHhcCcchHhHHHHHHHH----hcCCCceeEEEeeeeeccc
Confidence 33332 5699999999987542 236778899999999999987 3333456999999876431
Q ss_pred C--------------------CCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcc
Q 024752 157 I--------------------PMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLL 201 (263)
Q Consensus 157 ~--------------------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~ 201 (263)
. .....|+-||.+.|-+++... ..|.++..++||+|-.+-.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~----~rGLpv~I~Rpg~I~gds~ 202 (382)
T COG3320 142 EYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAG----DRGLPVTIFRPGYITGDSR 202 (382)
T ss_pred cccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHh----hcCCCeEEEecCeeeccCc
Confidence 1 123679999999999998654 4499999999999966554
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=2e-11 Score=113.44 Aligned_cols=190 Identities=18% Similarity=0.186 Sum_probs=122.5
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCccE
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNI 94 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 94 (263)
+++||||+|+||++++++|.++|++|++++|..... ....+.++.+|++++. +.+++ ..+|+
T Consensus 2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---------~~~~ve~v~~Dl~d~~-l~~al--------~~~D~ 63 (699)
T PRK12320 2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---------LDPRVDYVCASLRNPV-LQELA--------GEADA 63 (699)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---------ccCCceEEEccCCCHH-HHHHh--------cCCCE
Confidence 699999999999999999999999999999875421 1234778899999873 33332 35899
Q ss_pred EEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHHHHH
Q 024752 95 LINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLT 174 (263)
Q Consensus 95 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~~ 174 (263)
+||+|+..... ...+|+.++.++++++ ++.+ .++|++||..+ .+ ..|. ..+.+.
T Consensus 64 VIHLAa~~~~~------------~~~vNv~Gt~nLleAA----~~~G-vRiV~~SS~~G---~~--~~~~----~aE~ll 117 (699)
T PRK12320 64 VIHLAPVDTSA------------PGGVGITGLAHVANAA----ARAG-ARLLFVSQAAG---RP--ELYR----QAETLV 117 (699)
T ss_pred EEEcCccCccc------------hhhHHHHHHHHHHHHH----HHcC-CeEEEEECCCC---CC--cccc----HHHHHH
Confidence 99999863211 1247999999999987 4443 48999998642 11 1232 223332
Q ss_pred HHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCcEEEe
Q 024752 175 KNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVICV 254 (263)
Q Consensus 175 ~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~ 254 (263)
+ ..++.+..+.|+.++.+...... ...+...........|. .....+|++++++.++.... +| .+|+
T Consensus 118 ~-------~~~~p~~ILR~~nVYGp~~~~~~-~r~I~~~l~~~~~~~pI-~vIyVdDvv~alv~al~~~~---~G-iyNI 184 (699)
T PRK12320 118 S-------TGWAPSLVIRIAPPVGRQLDWMV-CRTVATLLRSKVSARPI-RVLHLDDLVRFLVLALNTDR---NG-VVDL 184 (699)
T ss_pred H-------hcCCCEEEEeCceecCCCCcccH-hHHHHHHHHHHHcCCce-EEEEHHHHHHHHHHHHhCCC---CC-EEEE
Confidence 2 13578899999999887432110 01111111111111111 12478999999887765321 35 9999
Q ss_pred CCCcccc
Q 024752 255 DGGYSVT 261 (263)
Q Consensus 255 dgG~~~~ 261 (263)
.||..++
T Consensus 185 G~~~~~S 191 (699)
T PRK12320 185 ATPDTTN 191 (699)
T ss_pred eCCCeeE
Confidence 9997664
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.39 E-value=4.9e-11 Score=112.53 Aligned_cols=141 Identities=16% Similarity=0.109 Sum_probs=99.0
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
.+++|||||+|.||+++++.|.++|++|.. ...|++|.+.+...+.. .++
T Consensus 380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~------------------------~~~~l~d~~~v~~~i~~------~~p 429 (668)
T PLN02260 380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEY------------------------GKGRLEDRSSLLADIRN------VKP 429 (668)
T ss_pred CceEEEECCCchHHHHHHHHHHhCCCeEEe------------------------eccccccHHHHHHHHHh------hCC
Confidence 467999999999999999999999988731 12367777777666653 268
Q ss_pred cEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccc-----------c-----
Q 024752 93 NILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVI-----------A----- 156 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-----------~----- 156 (263)
|+|||+|+....... +...++....+++|+.++.++++++. +.+ .+++++||...+. +
T Consensus 430 d~Vih~Aa~~~~~~~-~~~~~~~~~~~~~N~~gt~~l~~a~~----~~g-~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~ 503 (668)
T PLN02260 430 THVFNAAGVTGRPNV-DWCESHKVETIRANVVGTLTLADVCR----ENG-LLMMNFATGCIFEYDAKHPEGSGIGFKEED 503 (668)
T ss_pred CEEEECCcccCCCCC-ChHHhCHHHHHHHHhHHHHHHHHHHH----HcC-CeEEEEcccceecCCcccccccCCCCCcCC
Confidence 999999998643211 22344567889999999999999983 333 3566776643211 0
Q ss_pred --CCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEe
Q 024752 157 --IPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVA 192 (263)
Q Consensus 157 --~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~ 192 (263)
.+....|+.||.+.|.+++.+.. ...+|+..+.
T Consensus 504 ~~~~~~~~Yg~sK~~~E~~~~~~~~---~~~~r~~~~~ 538 (668)
T PLN02260 504 KPNFTGSFYSKTKAMVEELLREYDN---VCTLRVRMPI 538 (668)
T ss_pred CCCCCCChhhHHHHHHHHHHHhhhh---heEEEEEEec
Confidence 12236799999999999987632 2245555554
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.37 E-value=3.2e-11 Score=110.77 Aligned_cols=229 Identities=13% Similarity=0.077 Sum_probs=142.3
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCC---eEEEeeCCchh--HH-HHHHHH---------Hh-c--------C
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGA---IVHTCSRNETE--LN-QRIQEW---------KS-K--------G 61 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~---~V~~~~r~~~~--~~-~~~~~~---------~~-~--------~ 61 (263)
...--+++|+|+||||+|+||..++++|++.+. +|+++.|.... .. .+.+++ .+ . .
T Consensus 112 ~I~~f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~ 191 (605)
T PLN02503 112 GIAEFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFML 191 (605)
T ss_pred chhhhhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCcccccccc
Confidence 333347899999999999999999999998653 68888886432 22 221222 11 1 2
Q ss_pred CceEEEeccCCCHH------HHHHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhH
Q 024752 62 LQVSGSVCDLKIRA------QREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHP 135 (263)
Q Consensus 62 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 135 (263)
.++.++..|++++. ..+.+. ..+|+|||+|+..... +.++..+++|+.|+.++++.+..
T Consensus 192 ~Ki~~v~GDl~d~~LGLs~~~~~~L~--------~~vDiVIH~AA~v~f~-------~~~~~a~~vNV~GT~nLLelA~~ 256 (605)
T PLN02503 192 SKLVPVVGNVCESNLGLEPDLADEIA--------KEVDVIINSAANTTFD-------ERYDVAIDINTRGPCHLMSFAKK 256 (605)
T ss_pred ccEEEEEeeCCCcccCCCHHHHHHHH--------hcCCEEEECccccccc-------cCHHHHHHHHHHHHHHHHHHHHH
Confidence 46888999999862 333222 3589999999976421 34677899999999999998743
Q ss_pred HHhhCCCceEEEEccccccc---------cCC------------------------------------------------
Q 024752 136 LLKSAGNGNIIFISSVAGVI---------AIP------------------------------------------------ 158 (263)
Q Consensus 136 ~~~~~~~~~iv~vsS~~~~~---------~~~------------------------------------------------ 158 (263)
. ....++|++||..... .++
T Consensus 257 ~---~~lk~fV~vSTayVyG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l 333 (605)
T PLN02503 257 C---KKLKLFLQVSTAYVNGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKM 333 (605)
T ss_pred c---CCCCeEEEccCceeecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHh
Confidence 2 1235789998865321 111
Q ss_pred ------------CCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccch---hH-HHHHHhHhc--
Q 024752 159 ------------MCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSN---FL-EHANRMVLR-- 220 (263)
Q Consensus 159 ------------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~---~~-~~~~~~~~~-- 220 (263)
.-..|.-+|+..|.+++..+ .++.+..++|..|.+....+++..-+ .. .........
T Consensus 334 ~~~g~~~~~~~~~pNtYt~TK~lAE~lV~~~~-----~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~l 408 (605)
T PLN02503 334 KDLGLERAKLYGWQDTYVFTKAMGEMVINSMR-----GDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQL 408 (605)
T ss_pred hhcccchhhhCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEcCCEecccccCCccccccCccccchhhhheeccce
Confidence 01458888888888887332 37999999999996544333221100 00 000000000
Q ss_pred -------CCCCCCCChhhHHHHHHHHcCC-C-CCCccCcEEEeCCC
Q 024752 221 -------TPMLRPGEPNEVSSVVAFLCLS-A-TSYVTGQVICVDGG 257 (263)
Q Consensus 221 -------~~~~~~~~~~~va~~~~~l~s~-~-~~~~~G~~i~~dgG 257 (263)
.......++|.|+++++..+.. . .....++++++.++
T Consensus 409 r~~~~~~~~~~DiVPVD~vvna~i~a~a~~~~~~~~~~~vYn~ts~ 454 (605)
T PLN02503 409 TGFLADPNGVLDVVPADMVVNATLAAMAKHGGAAKPEINVYQIASS 454 (605)
T ss_pred eEEEeCCCeeEeEEeecHHHHHHHHHHHhhhcccCCCCCEEEeCCC
Confidence 0112235578899987765321 1 11236899999877
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.6e-11 Score=110.66 Aligned_cols=161 Identities=19% Similarity=0.249 Sum_probs=118.8
Q ss_pred CCEEE----EecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 13 GMTAL----VTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 13 ~k~vl----VtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
|..++ |+||++|+|.++++.|...|+.|+.+.+.+..... ..
T Consensus 34 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~---------------------------------~~- 79 (450)
T PRK08261 34 GQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAA---------------------------------GW- 79 (450)
T ss_pred CCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCcccccccc---------------------------------Cc-
Confidence 34555 88889999999999999999999987765541100 00
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
..+++.+++-+-.. .+.+++ .+.+.+++..++.|.+ .|+||+++|..... ....|+++|+
T Consensus 80 ~~~~~~~~~d~~~~-------~~~~~l--------~~~~~~~~~~l~~l~~--~griv~i~s~~~~~---~~~~~~~aka 139 (450)
T PRK08261 80 GDRFGALVFDATGI-------TDPADL--------KALYEFFHPVLRSLAP--CGRVVVLGRPPEAA---ADPAAAAAQR 139 (450)
T ss_pred CCcccEEEEECCCC-------CCHHHH--------HHHHHHHHHHHHhccC--CCEEEEEccccccC---CchHHHHHHH
Confidence 13455444322211 022332 2444667777787754 58999999977653 3456999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCcc
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~ 248 (263)
++.++++++++|+ ++|++++.|.|++ ..++++++++.|++++.+.+++
T Consensus 140 al~gl~rsla~E~-~~gi~v~~i~~~~-------------------------------~~~~~~~~~~~~l~s~~~a~~~ 187 (450)
T PRK08261 140 ALEGFTRSLGKEL-RRGATAQLVYVAP-------------------------------GAEAGLESTLRFFLSPRSAYVS 187 (450)
T ss_pred HHHHHHHHHHHHh-hcCCEEEEEecCC-------------------------------CCHHHHHHHHHHhcCCccCCcc
Confidence 9999999999999 7799999998863 2478889999999999999999
Q ss_pred CcEEEeCCCcc
Q 024752 249 GQVICVDGGYS 259 (263)
Q Consensus 249 G~~i~~dgG~~ 259 (263)
||.+.++++..
T Consensus 188 g~~i~~~~~~~ 198 (450)
T PRK08261 188 GQVVRVGAADA 198 (450)
T ss_pred CcEEEecCCcc
Confidence 99999998764
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.3e-10 Score=91.27 Aligned_cols=173 Identities=18% Similarity=0.094 Sum_probs=117.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
++++||||+ |+|.++++.|+++|++|++.+|+++..+.+...+.. ..++.++.+|++|++++.++++.+.+.+ +++|
T Consensus 1 m~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~-~~~i~~~~~Dv~d~~sv~~~i~~~l~~~-g~id 77 (177)
T PRK08309 1 MHALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT-PESITPLPLDYHDDDALKLAIKSTIEKN-GPFD 77 (177)
T ss_pred CEEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc-CCcEEEEEccCCCHHHHHHHHHHHHHHc-CCCe
Confidence 468999998 677779999999999999999998877766655543 4568889999999999999999998887 7899
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHHHH
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQL 173 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~ 173 (263)
.+|+.+-...+ -.+..++...=.+.+.-+++.+-...+..+
T Consensus 78 ~lv~~vh~~~~----------------------~~~~~~~~~~gv~~~~~~~~h~~gs~~~~~----------------- 118 (177)
T PRK08309 78 LAVAWIHSSAK----------------------DALSVVCRELDGSSETYRLFHVLGSAASDP----------------- 118 (177)
T ss_pred EEEEeccccch----------------------hhHHHHHHHHccCCCCceEEEEeCCcCCch-----------------
Confidence 99988775322 233334322111122237888764333111
Q ss_pred HHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHc-CCCCCCccCcE
Q 024752 174 TKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC-LSATSYVTGQV 251 (263)
Q Consensus 174 ~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~-s~~~~~~~G~~ 251 (263)
+..+..+...++...-|..|++..+- ..||.+.+|+++.++.-. ++.+.++.|+.
T Consensus 119 -~~~~~~~~~~~~~~~~i~lgf~~~~~----------------------~~rwlt~~ei~~gv~~~~~~~~~~~~~g~~ 174 (177)
T PRK08309 119 -RIPSEKIGPARCSYRRVILGFVLEDT----------------------YSRWLTHEEISDGVIKAIESDADEHVVGTV 174 (177)
T ss_pred -hhhhhhhhhcCCceEEEEEeEEEeCC----------------------ccccCchHHHHHHHHHHHhcCCCeEEEEEe
Confidence 11222333445677778888875432 236778899999877544 45555666653
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.7e-11 Score=99.86 Aligned_cols=211 Identities=17% Similarity=0.138 Sum_probs=143.5
Q ss_pred cccccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHH
Q 024752 4 FREQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMET 83 (263)
Q Consensus 4 ~~~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 83 (263)
.+.+.+..++++++||||+|+||++|+.+|..+|+.|++++.-..........+.. ..++..+..|+..+ ++
T Consensus 18 ~~~~~~p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~-~~~fel~~hdv~~p-----l~-- 89 (350)
T KOG1429|consen 18 LREQVKPSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIG-HPNFELIRHDVVEP-----LL-- 89 (350)
T ss_pred hhhcccCCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhcc-CcceeEEEeechhH-----HH--
Confidence 34667778899999999999999999999999999999999876665544443322 23455566676543 33
Q ss_pred HHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc-------
Q 024752 84 VSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA------- 156 (263)
Q Consensus 84 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~------- 156 (263)
..+|.++|.|+...+... ...-.+.+..|+.++.+++..+ + +-++|+++.|+...+..
T Consensus 90 ------~evD~IyhLAapasp~~y----~~npvktIktN~igtln~lgla----k-rv~aR~l~aSTseVYgdp~~hpq~ 154 (350)
T KOG1429|consen 90 ------KEVDQIYHLAAPASPPHY----KYNPVKTIKTNVIGTLNMLGLA----K-RVGARFLLASTSEVYGDPLVHPQV 154 (350)
T ss_pred ------HHhhhhhhhccCCCCccc----ccCccceeeecchhhHHHHHHH----H-HhCceEEEeecccccCCcccCCCc
Confidence 347888898887765432 2233567889999999999887 2 23579999988765421
Q ss_pred ---------CCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCC----
Q 024752 157 ---------IPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPM---- 223 (263)
Q Consensus 157 ---------~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---- 223 (263)
....+.|.-.|...+.|+..+.++ .||.|...++..++.|...-..... ......+.....|+
T Consensus 155 e~ywg~vnpigpr~cydegKr~aE~L~~~y~k~---~giE~rIaRifNtyGPrm~~~dgrv-vsnf~~q~lr~epltv~g 230 (350)
T KOG1429|consen 155 ETYWGNVNPIGPRSCYDEGKRVAETLCYAYHKQ---EGIEVRIARIFNTYGPRMHMDDGRV-VSNFIAQALRGEPLTVYG 230 (350)
T ss_pred cccccccCcCCchhhhhHHHHHHHHHHHHhhcc---cCcEEEEEeeecccCCccccCCChh-hHHHHHHHhcCCCeEEEc
Confidence 123456999999999999877655 4999999998888877653322111 01111222222232
Q ss_pred -----CCCCChhhHHHHHHHHcC
Q 024752 224 -----LRPGEPNEVSSVVAFLCL 241 (263)
Q Consensus 224 -----~~~~~~~~va~~~~~l~s 241 (263)
..+...+|..+.++.|..
T Consensus 231 ~G~qtRSF~yvsD~Vegll~Lm~ 253 (350)
T KOG1429|consen 231 DGKQTRSFQYVSDLVEGLLRLME 253 (350)
T ss_pred CCcceEEEEeHHHHHHHHHHHhc
Confidence 234457888888777664
|
|
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.8e-11 Score=98.78 Aligned_cols=103 Identities=14% Similarity=0.094 Sum_probs=79.5
Q ss_pred CEEEEecC-CCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 14 MTALVTGG-TKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 14 k~vlVtGa-s~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
.+=.||.. +||||+++|++|+++|++|+++++... +... ....+|+++.+++.++++++.+.+ +++
T Consensus 15 ~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~~----~~~~~Dv~d~~s~~~l~~~v~~~~-g~i 81 (227)
T TIGR02114 15 SVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKPE----PHPNLSIREIETTKDLLITLKELV-QEH 81 (227)
T ss_pred CceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------cccc----cCCcceeecHHHHHHHHHHHHHHc-CCC
Confidence 44556655 578999999999999999999876311 0000 013589999999999999999988 789
Q ss_pred cEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHH
Q 024752 93 NILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQL 132 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 132 (263)
|++|||||+....++.+.+.++|++++.. +.+.+.+-
T Consensus 82 DiLVnnAgv~d~~~~~~~s~e~~~~~~~~---~~~~~~~~ 118 (227)
T TIGR02114 82 DILIHSMAVSDYTPVYMTDLEQVQASDNL---NEFLSKQN 118 (227)
T ss_pred CEEEECCEeccccchhhCCHHHHhhhcch---hhhhcccc
Confidence 99999999987778888999999987544 55555543
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.20 E-value=4.5e-10 Score=91.66 Aligned_cols=201 Identities=18% Similarity=0.183 Sum_probs=118.5
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCccEE
Q 024752 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNIL 95 (263)
Q Consensus 16 vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~l 95 (263)
++||||+|.||++++.+|.+.|+.|+++.|++.+.+.... ..+. ..+.+.+.....+|+|
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~------~~v~--------------~~~~~~~~~~~~~Dav 60 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH------PNVT--------------LWEGLADALTLGIDAV 60 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC------cccc--------------ccchhhhcccCCCCEE
Confidence 5899999999999999999999999999999876543321 0000 1111111111369999
Q ss_pred EeCCCCCCCCC-CCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-CCceEEEEccccccccCCCCcchhhHHH----H
Q 024752 96 INNAGTFIPKE-TTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-GNGNIIFISSVAGVIAIPMCSIYASSKV----A 169 (263)
Q Consensus 96 i~~ag~~~~~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~~~~~~~~~~Y~~sK~----a 169 (263)
||.||...... + +.+.-+..++ +-...++.+.+...+. .++++..-+|..++++......|.-... .
T Consensus 61 INLAG~~I~~rrW---t~~~K~~i~~----SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~F 133 (297)
T COG1090 61 INLAGEPIAERRW---TEKQKEEIRQ----SRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDF 133 (297)
T ss_pred EECCCCccccccC---CHHHHHHHHH----HHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCCh
Confidence 99999864432 3 3333344433 3444555555555532 3456666667777776544433332222 2
Q ss_pred HHHHHHHHHHHH---ccCCcEEEEEecCcccCCccccccccchhHHHH--HHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 170 MNQLTKNLACEW---AKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHA--NRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 170 ~~~~~~~~a~e~---~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
+..+++.+-.+. ...|+||..++-|.|-++-...........+.. .++........|...||.++++.|+....
T Consensus 134 la~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~ 212 (297)
T COG1090 134 LAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENE 212 (297)
T ss_pred HHHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCc
Confidence 334444443332 245899999999999876544433322221100 11222222334677999999999998653
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.13 E-value=3.7e-10 Score=92.76 Aligned_cols=201 Identities=20% Similarity=0.207 Sum_probs=121.2
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCccEE
Q 024752 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNIL 95 (263)
Q Consensus 16 vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~l 95 (263)
|+|+||+|.+|+.+++.|++.+++|.++.|+... +..+++...+. ..+.+|+.+++++.+++ ..+|.+
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~~g~--~vv~~d~~~~~~l~~al--------~g~d~v 68 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQALGA--EVVEADYDDPESLVAAL--------KGVDAV 68 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHHTTT--EEEES-TT-HHHHHHHH--------TTCSEE
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhcccc--eEeecccCCHHHHHHHH--------cCCceE
Confidence 6899999999999999999999999999999843 34444555444 56699999999998888 478999
Q ss_pred EeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCC----CCcchhhHHHHHH
Q 024752 96 INNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIP----MCSIYASSKVAMN 171 (263)
Q Consensus 96 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~----~~~~Y~~sK~a~~ 171 (263)
|++.+..... . ......+++++ ++.+-.++|+ ||........ +...+-..|..++
T Consensus 69 ~~~~~~~~~~-----~-----------~~~~~~li~Aa----~~agVk~~v~-ss~~~~~~~~~~~~p~~~~~~~k~~ie 127 (233)
T PF05368_consen 69 FSVTPPSHPS-----E-----------LEQQKNLIDAA----KAAGVKHFVP-SSFGADYDESSGSEPEIPHFDQKAEIE 127 (233)
T ss_dssp EEESSCSCCC-----H-----------HHHHHHHHHHH----HHHT-SEEEE-SEESSGTTTTTTSTTHHHHHHHHHHHH
T ss_pred EeecCcchhh-----h-----------hhhhhhHHHhh----hccccceEEE-EEecccccccccccccchhhhhhhhhh
Confidence 9998865411 1 11223445555 4445678875 4443333111 1122223566665
Q ss_pred HHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCC---CCC-ChhhHHHHHHHHcCCCCCCc
Q 024752 172 QLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPML---RPG-EPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 172 ~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~va~~~~~l~s~~~~~~ 247 (263)
.+.+. .|+..+.|+||+.......................-..+.. .+. +.+|+++.+..++.+...+.
T Consensus 128 ~~l~~-------~~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~ 200 (233)
T PF05368_consen 128 EYLRE-------SGIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHN 200 (233)
T ss_dssp HHHHH-------CTSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTT
T ss_pred hhhhh-------ccccceeccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhc
Confidence 55443 38999999999886554432221100000000000011211 233 67999999988887754444
Q ss_pred cCcEEEeCC
Q 024752 248 TGQVICVDG 256 (263)
Q Consensus 248 ~G~~i~~dg 256 (263)
.|..+.+.|
T Consensus 201 ~~~~~~~~~ 209 (233)
T PF05368_consen 201 NGKTIFLAG 209 (233)
T ss_dssp EEEEEEEGG
T ss_pred CCEEEEeCC
Confidence 788888755
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.91 E-value=3.7e-08 Score=78.11 Aligned_cols=204 Identities=15% Similarity=0.097 Sum_probs=131.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC---eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGA---IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
|+++|||++|=.|++|.+.+.+.|. +.++.+.. .+|+++.++.++++++ .
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk---------------------d~DLt~~a~t~~lF~~------e 54 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK---------------------DADLTNLADTRALFES------E 54 (315)
T ss_pred ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc---------------------cccccchHHHHHHHhc------c
Confidence 7899999999999999999999876 34443322 3799999999999885 5
Q ss_pred CccEEEeCCCCCCC-CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccc--------------
Q 024752 91 KLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVI-------------- 155 (263)
Q Consensus 91 ~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-------------- 155 (263)
++-++||.|+.... -.-..-..+-|.+.+++| -+.++.+ .+.+-.++++..|.+-+.
T Consensus 55 kPthVIhlAAmVGGlf~N~~ynldF~r~Nl~in----dNVlhsa----~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~ 126 (315)
T KOG1431|consen 55 KPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQIN----DNVLHSA----HEHGVKKVVSCLSTCIFPDKTSYPIDETMVHN 126 (315)
T ss_pred CCceeeehHhhhcchhhcCCCchHHHhhcceec----hhHHHHH----HHhchhhhhhhcceeecCCCCCCCCCHHHhcc
Confidence 78899999875432 111122445555555444 3555555 334445677777755331
Q ss_pred --cCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccccc----chhHHHH-----------HHhH
Q 024752 156 --AIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKD----SNFLEHA-----------NRMV 218 (263)
Q Consensus 156 --~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----~~~~~~~-----------~~~~ 218 (263)
+.|....|+.+|..+.-..+.++.++ |-...++.|-.+..|--.-.++. +.+.... .-+.
T Consensus 127 gpphpsN~gYsyAKr~idv~n~aY~~qh---g~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwG 203 (315)
T KOG1431|consen 127 GPPHPSNFGYSYAKRMIDVQNQAYRQQH---GRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWG 203 (315)
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHh---CCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEec
Confidence 22345669999998888888888776 55677777766655432111111 1111111 1223
Q ss_pred hcCCCCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCc
Q 024752 219 LRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGY 258 (263)
Q Consensus 219 ~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~ 258 (263)
...|++.+...+|.|++++|++.+-. .=+.|++..|.
T Consensus 204 sG~PlRqFiys~DLA~l~i~vlr~Y~---~vEpiils~ge 240 (315)
T KOG1431|consen 204 SGSPLRQFIYSDDLADLFIWVLREYE---GVEPIILSVGE 240 (315)
T ss_pred CCChHHHHhhHhHHHHHHHHHHHhhc---CccceEeccCc
Confidence 35688888889999999999986432 24566666665
|
|
| >COG4982 3-oxoacyl-[acyl-carrier protein] | Back alignment and domain information |
|---|
Probab=98.89 E-value=2.6e-07 Score=82.99 Aligned_cols=242 Identities=17% Similarity=0.132 Sum_probs=154.7
Q ss_pred ccCCCCCCEEEEecCC-CchHHHHHHHHHHCCCeEEEeeCCc-hhHHHHHHHHHhc----CCceEEEeccCCCHHHHHHH
Q 024752 7 QRWSLKGMTALVTGGT-KGIGYAVVEELAAFGAIVHTCSRNE-TELNQRIQEWKSK----GLQVSGSVCDLKIRAQREKL 80 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas-~giG~~~a~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~ 80 (263)
......+|++||||++ +.||-+++.+|++.|++|+++..+- +...+..+.+... +...-.++.++....+++.+
T Consensus 390 ~~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAl 469 (866)
T COG4982 390 NGGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDAL 469 (866)
T ss_pred CCCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHH
Confidence 4566889999999999 6899999999999999999877554 4455666666643 45567788999999999999
Q ss_pred HHHHHhhc-------------CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC---Cce
Q 024752 81 METVSSQF-------------DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG---NGN 144 (263)
Q Consensus 81 ~~~~~~~~-------------~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~ 144 (263)
++.+-.+. .-.+|.+|-.|++...+.+.+..... +-.+++-++....++-.+.++-..++ +-+
T Consensus 470 IewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsra-E~~~rilLw~V~Rliggl~~~~s~r~v~~R~h 548 (866)
T COG4982 470 IEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRA-EFAMRILLWNVLRLIGGLKKQGSSRGVDTRLH 548 (866)
T ss_pred HHHhccccccccCCcceecccccCcceeeecccCCccCccccCCchH-HHHHHHHHHHHHHHHHHhhhhccccCcccceE
Confidence 99876543 12488999999887777666554422 33344445555555555544433321 234
Q ss_pred EEEEcccc-ccccCCCCcchhhHHHHHHHHHHHHHHHHc-cCCcEEEEEecCccc-CCccccccccchhHHHHHHhHhcC
Q 024752 145 IIFISSVA-GVIAIPMCSIYASSKVAMNQLTKNLACEWA-KDKIRVNTVAPWVIR-TPLLDTVEKDSNFLEHANRMVLRT 221 (263)
Q Consensus 145 iv~vsS~~-~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~-~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~ 221 (263)
+|.=.|.. +++ .+.+.|+-+|++++.++.-+..|-. ..-+.+..-.-||+. |.+... .+.+.+..++..
T Consensus 549 VVLPgSPNrG~F--GgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGLMg~---Ndiiv~aiEk~G--- 620 (866)
T COG4982 549 VVLPGSPNRGMF--GGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTGLMGH---NDIIVAAIEKAG--- 620 (866)
T ss_pred EEecCCCCCCcc--CCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeeccccccCC---cchhHHHHHHhC---
Confidence 55444432 222 3568899999999998877666532 112555555668876 333322 222222223221
Q ss_pred CCCCCCChhhHHHHHHHHcCCCCCC---ccCcEEEeCCCcc
Q 024752 222 PMLRPGEPNEVSSVVAFLCLSATSY---VTGQVICVDGGYS 259 (263)
Q Consensus 222 ~~~~~~~~~~va~~~~~l~s~~~~~---~~G~~i~~dgG~~ 259 (263)
-+-.+.+|++..++-|++.+... -+--..+++||..
T Consensus 621 --V~tyS~~EmA~~LLgL~saev~e~a~~~PI~aDLtGGL~ 659 (866)
T COG4982 621 --VRTYSTDEMAFNLLGLASAEVVELAASSPITADLTGGLG 659 (866)
T ss_pred --ceecCHHHHHHHHHhhccHHHHHHHhcCCeEeeccCccc
Confidence 13346899999988888754221 1233556667754
|
|
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.2e-08 Score=89.77 Aligned_cols=83 Identities=22% Similarity=0.207 Sum_probs=64.6
Q ss_pred CCCCCCEEEEecC----------------CCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCC
Q 024752 9 WSLKGMTALVTGG----------------TKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLK 72 (263)
Q Consensus 9 ~~~~~k~vlVtGa----------------s~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~ 72 (263)
-+++||+++|||| +|++|.++|++|+++|++|++++++.. .+ .. . ....+|++
T Consensus 184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-------~~-~--~~~~~dv~ 252 (399)
T PRK05579 184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-------TP-A--GVKRIDVE 252 (399)
T ss_pred cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-------CC-C--CcEEEccC
Confidence 4689999999999 455999999999999999999998763 11 01 1 12467999
Q ss_pred CHHHHHHHHHHHHhhcCCCccEEEeCCCCCCCCC
Q 024752 73 IRAQREKLMETVSSQFDGKLNILINNAGTFIPKE 106 (263)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~ 106 (263)
+.+++.+++. +.+ +++|++|||||+....+
T Consensus 253 ~~~~~~~~v~---~~~-~~~DilI~~Aav~d~~~ 282 (399)
T PRK05579 253 SAQEMLDAVL---AAL-PQADIFIMAAAVADYRP 282 (399)
T ss_pred CHHHHHHHHH---Hhc-CCCCEEEEccccccccc
Confidence 8888777765 445 78999999999876554
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.7e-08 Score=85.54 Aligned_cols=87 Identities=20% Similarity=0.169 Sum_probs=68.6
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEeeCCc---hhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHH
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAI-VHTCSRNE---TELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMET 83 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~-V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 83 (263)
..++++|+++|+|+ ||+|++++..|++.|++ |++++|+. ++++++.+++......+....+|+++.+++...+
T Consensus 121 ~~~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~-- 197 (289)
T PRK12548 121 GVDVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEI-- 197 (289)
T ss_pred CCCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhh--
Confidence 34688999999999 69999999999999996 99999997 6777777777654445556678888776665543
Q ss_pred HHhhcCCCccEEEeCCCCCC
Q 024752 84 VSSQFDGKLNILINNAGTFI 103 (263)
Q Consensus 84 ~~~~~~~~id~li~~ag~~~ 103 (263)
...|+||||..++-
T Consensus 198 ------~~~DilINaTp~Gm 211 (289)
T PRK12548 198 ------ASSDILVNATLVGM 211 (289)
T ss_pred ------ccCCEEEEeCCCCC
Confidence 35699999987653
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.86 E-value=2.3e-07 Score=77.72 Aligned_cols=198 Identities=19% Similarity=0.119 Sum_probs=124.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
+.++||||+|.+|++++++|.++|++|.+..|+++...... ..+.+...|+.++.++...+ ..+|
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-------~~v~~~~~d~~~~~~l~~a~--------~G~~ 65 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-------GGVEVVLGDLRDPKSLVAGA--------KGVD 65 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-------CCcEEEEeccCCHhHHHHHh--------cccc
Confidence 46899999999999999999999999999999998876654 45788899999999988887 3678
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHHHH
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQL 173 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~ 173 (263)
.+++..+... +.. ..............+... .+..+++.+|+..+.. .....|..+|...+..
T Consensus 66 ~~~~i~~~~~-~~~---------~~~~~~~~~~~~~a~~a~-----~~~~~~~~~s~~~~~~--~~~~~~~~~~~~~e~~ 128 (275)
T COG0702 66 GVLLISGLLD-GSD---------AFRAVQVTAVVRAAEAAG-----AGVKHGVSLSVLGADA--ASPSALARAKAAVEAA 128 (275)
T ss_pred EEEEEecccc-ccc---------chhHHHHHHHHHHHHHhc-----CCceEEEEeccCCCCC--CCccHHHHHHHHHHHH
Confidence 8888877654 221 111222333333333331 2345777777765543 2346799999999988
Q ss_pred HHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCC--C--CCCCChhhHHHHHHHHcCCCCCCccC
Q 024752 174 TKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTP--M--LRPGEPNEVSSVVAFLCLSATSYVTG 249 (263)
Q Consensus 174 ~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~va~~~~~l~s~~~~~~~G 249 (263)
.++. |+.-..+.|-.+..+..... ............+ . ..+...+|++..+...+.... ..|
T Consensus 129 l~~s-------g~~~t~lr~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~--~~~ 194 (275)
T COG0702 129 LRSS-------GIPYTTLRRAAFYLGAGAAF-----IEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPA--TAG 194 (275)
T ss_pred HHhc-------CCCeEEEecCeeeeccchhH-----HHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCc--ccC
Confidence 8754 66655565333322221111 0000000000011 1 234668899998776654332 456
Q ss_pred cEEEeCCC
Q 024752 250 QVICVDGG 257 (263)
Q Consensus 250 ~~i~~dgG 257 (263)
+.+.+.|-
T Consensus 195 ~~~~l~g~ 202 (275)
T COG0702 195 RTYELAGP 202 (275)
T ss_pred cEEEccCC
Confidence 77766654
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.8e-08 Score=94.36 Aligned_cols=178 Identities=17% Similarity=0.234 Sum_probs=145.5
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEeeCCchhHH---HHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAI-VHTCSRNETELN---QRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~-V~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
-..|..+|+||=||.|+++++.|.++|++ +++++|+--+.. .....+...|..+..-..|++..+....++++..+
T Consensus 1766 hpeksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~k 1845 (2376)
T KOG1202|consen 1766 HPEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNK 1845 (2376)
T ss_pred CccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhh
Confidence 34689999999999999999999999995 888998754432 33455667788888888999999999999988766
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhH
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASS 166 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s 166 (263)
. +.+-.++|.|.+...+-+++.++++|.+.-+..+.++.++-+...+..-+ -..+|..||...-.+..+...|+.+
T Consensus 1846 l--~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~--LdyFv~FSSvscGRGN~GQtNYG~a 1921 (2376)
T KOG1202|consen 1846 L--GPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPE--LDYFVVFSSVSCGRGNAGQTNYGLA 1921 (2376)
T ss_pred c--ccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcc--cceEEEEEeecccCCCCcccccchh
Confidence 5 68999999999888888999999999999999999999988876554433 3589999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcc
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVI 196 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v 196 (263)
.++++.+++--+.+ |..=.+|..|.|
T Consensus 1922 NS~MERiceqRr~~----GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1922 NSAMERICEQRRHE----GFPGTAIQWGAI 1947 (2376)
T ss_pred hHHHHHHHHHhhhc----CCCcceeeeecc
Confidence 99999999754333 444445555544
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.7e-07 Score=76.87 Aligned_cols=212 Identities=20% Similarity=0.187 Sum_probs=136.9
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
-++.|-++-|.||+|++|+.++.+|++.|-.|++--|-.+..-.-.+-..+ -+++.+...|+.|+++|+++++
T Consensus 57 sS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGd-LGQvl~~~fd~~DedSIr~vvk------ 129 (391)
T KOG2865|consen 57 SSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGD-LGQVLFMKFDLRDEDSIRAVVK------ 129 (391)
T ss_pred ccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeeccc-ccceeeeccCCCCHHHHHHHHH------
Confidence 457788999999999999999999999999999988865432222111111 2458999999999999999986
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
.-+++||..|.-.+.. ..+. -++|+.++-.+++.+ ++.+--++|.+|+..+. ....+-|=-+|+
T Consensus 130 --~sNVVINLIGrd~eTk--nf~f------~Dvn~~~aerlAric----ke~GVerfIhvS~Lgan--v~s~Sr~LrsK~ 193 (391)
T KOG2865|consen 130 --HSNVVINLIGRDYETK--NFSF------EDVNVHIAERLARIC----KEAGVERFIHVSCLGAN--VKSPSRMLRSKA 193 (391)
T ss_pred --hCcEEEEeeccccccC--Cccc------ccccchHHHHHHHHH----HhhChhheeehhhcccc--ccChHHHHHhhh
Confidence 3489999999643311 1222 346777776666666 66667799999987643 333455777888
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCC--------CCCChhhHHHHHHHHc
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPML--------RPGEPNEVSSVVAFLC 240 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~va~~~~~l~ 240 (263)
+.|-.++. ++. ..+.|.|.-+....-+-... +...|.+ ..-.|+. .+..+-|||.+|+--+
T Consensus 194 ~gE~aVrd---afP----eAtIirPa~iyG~eDrfln~---ya~~~rk-~~~~pL~~~GekT~K~PVyV~DVaa~IvnAv 262 (391)
T KOG2865|consen 194 AGEEAVRD---AFP----EATIIRPADIYGTEDRFLNY---YASFWRK-FGFLPLIGKGEKTVKQPVYVVDVAAAIVNAV 262 (391)
T ss_pred hhHHHHHh---hCC----cceeechhhhcccchhHHHH---HHHHHHh-cCceeeecCCcceeeccEEEehHHHHHHHhc
Confidence 88776653 232 23456676554322111110 1111121 1123332 2345789999998777
Q ss_pred CCCCCCccCcEEEeCC
Q 024752 241 LSATSYVTGQVICVDG 256 (263)
Q Consensus 241 s~~~~~~~G~~i~~dg 256 (263)
.|.++ .|.++.+-|
T Consensus 263 kDp~s--~Gktye~vG 276 (391)
T KOG2865|consen 263 KDPDS--MGKTYEFVG 276 (391)
T ss_pred cCccc--cCceeeecC
Confidence 65533 587777665
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.75 E-value=1.7e-07 Score=82.99 Aligned_cols=178 Identities=17% Similarity=0.181 Sum_probs=119.1
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCC--C-eEEEeeCCchh--HHH---------HHHHHHhc----CCceEEEeccC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFG--A-IVHTCSRNETE--LNQ---------RIQEWKSK----GLQVSGSVCDL 71 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g--~-~V~~~~r~~~~--~~~---------~~~~~~~~----~~~~~~~~~D~ 71 (263)
-++||+++||||+|++|+-+.+.|++.- . ++++.-|.... .++ +.+.+.+. -.++..+..|+
T Consensus 9 f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi 88 (467)
T KOG1221|consen 9 FYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDI 88 (467)
T ss_pred HhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccc
Confidence 4789999999999999999999999763 2 67777775422 111 22222221 24577888898
Q ss_pred CCHHHHHHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccc
Q 024752 72 KIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSV 151 (263)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~ 151 (263)
++++---+.-+.- ... ..+|++||+|+.... .|.++..+.+|.+|+.++++.+....+- ..++.+|+.
T Consensus 89 ~~~~LGis~~D~~-~l~-~eV~ivih~AAtvrF-------de~l~~al~iNt~Gt~~~l~lak~~~~l---~~~vhVSTA 156 (467)
T KOG1221|consen 89 SEPDLGISESDLR-TLA-DEVNIVIHSAATVRF-------DEPLDVALGINTRGTRNVLQLAKEMVKL---KALVHVSTA 156 (467)
T ss_pred cCcccCCChHHHH-HHH-hcCCEEEEeeeeecc-------chhhhhhhhhhhHhHHHHHHHHHHhhhh---heEEEeehh
Confidence 8754432221111 111 579999999996532 3557888999999999999998665433 478888875
Q ss_pred cccc----------cC------------------------------CCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEE
Q 024752 152 AGVI----------AI------------------------------PMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTV 191 (263)
Q Consensus 152 ~~~~----------~~------------------------------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v 191 (263)
.... +. .....|.-+|+..|.+...-+ .+..+..+
T Consensus 157 y~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~-----~~lPivIi 231 (467)
T KOG1221|consen 157 YSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA-----ENLPLVII 231 (467)
T ss_pred heecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc-----cCCCeEEE
Confidence 5431 00 012458888888888876433 36788888
Q ss_pred ecCcccCCccccc
Q 024752 192 APWVIRTPLLDTV 204 (263)
Q Consensus 192 ~PG~v~t~~~~~~ 204 (263)
+|..|.+....+.
T Consensus 232 RPsiI~st~~EP~ 244 (467)
T KOG1221|consen 232 RPSIITSTYKEPF 244 (467)
T ss_pred cCCceeccccCCC
Confidence 8888876655443
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.6e-07 Score=74.95 Aligned_cols=86 Identities=21% Similarity=0.198 Sum_probs=68.8
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
..++++++++|+|++|++|+.+++.|++.|++|++++|+.++++++.+++.+.. ......+|..+.+++.++++
T Consensus 23 ~~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~----- 96 (194)
T cd01078 23 GKDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF-GEGVGAVETSDDAARAAAIK----- 96 (194)
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc-CCcEEEeeCCCHHHHHHHHh-----
Confidence 468999999999999999999999999999999999999988888877765321 23344678888888766663
Q ss_pred cCCCccEEEeCCCCC
Q 024752 88 FDGKLNILINNAGTF 102 (263)
Q Consensus 88 ~~~~id~li~~ag~~ 102 (263)
..|++|++....
T Consensus 97 ---~~diVi~at~~g 108 (194)
T cd01078 97 ---GADVVFAAGAAG 108 (194)
T ss_pred ---cCCEEEECCCCC
Confidence 468888876644
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.2e-07 Score=77.52 Aligned_cols=100 Identities=16% Similarity=0.087 Sum_probs=68.2
Q ss_pred CEEEEecCCCc-hHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 14 MTALVTGGTKG-IGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 14 k~vlVtGas~g-iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
.+-.||+.|+| ||+++|+.|+++|++|++++|+..... .....+.++.++ +..+..+.+.+.+ +.+
T Consensus 16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~-------~~~~~v~~i~v~-----s~~~m~~~l~~~~-~~~ 82 (229)
T PRK06732 16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP-------EPHPNLSIIEIE-----NVDDLLETLEPLV-KDH 82 (229)
T ss_pred CceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccC-------CCCCCeEEEEEe-----cHHHHHHHHHHHh-cCC
Confidence 46677766665 999999999999999999987642100 011234444432 2233333343444 578
Q ss_pred cEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhH
Q 024752 93 NILINNAGTFIPKETTEFTEEDFSTVMTTNFESA 126 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~ 126 (263)
|++|||||+....+....+.++|.+++++|.+..
T Consensus 83 DivIh~AAvsd~~~~~~~~~~~~~~~~~v~~~~~ 116 (229)
T PRK06732 83 DVLIHSMAVSDYTPVYMTDLEEVSASDNLNEFLT 116 (229)
T ss_pred CEEEeCCccCCceehhhhhhhhhhhhhhhhhhhc
Confidence 9999999998766666678889999988877654
|
|
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.4e-07 Score=82.85 Aligned_cols=110 Identities=18% Similarity=0.189 Sum_probs=76.6
Q ss_pred CCCCCEEEEecC---------------CCc-hHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCC
Q 024752 10 SLKGMTALVTGG---------------TKG-IGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKI 73 (263)
Q Consensus 10 ~~~~k~vlVtGa---------------s~g-iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 73 (263)
+++||+++|||| |+| +|.++|+.|..+|++|+++.++.... ... ....+|+++
T Consensus 182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---------~~~--~~~~~~v~~ 250 (390)
T TIGR00521 182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL---------TPP--GVKSIKVST 250 (390)
T ss_pred ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC---------CCC--CcEEEEecc
Confidence 589999999999 566 99999999999999999988765321 111 124579999
Q ss_pred HHHH-HHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCC--HHHHHHHHHhhhHhHHHHHHHHh
Q 024752 74 RAQR-EKLMETVSSQFDGKLNILINNAGTFIPKETTEFT--EEDFSTVMTTNFESAYHLSQLAH 134 (263)
Q Consensus 74 ~~~~-~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~--~~~~~~~~~~n~~~~~~~~~~~~ 134 (263)
.+++ ++++++. + +++|++|+|||+....+....+ .....+.+.+|+.-.--+++.+.
T Consensus 251 ~~~~~~~~~~~~---~-~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~ 310 (390)
T TIGR00521 251 AEEMLEAALNEL---A-KDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVR 310 (390)
T ss_pred HHHHHHHHHHhh---c-ccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHH
Confidence 8888 5555342 3 6799999999998765532211 11112345577777777777663
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.61 E-value=8e-07 Score=77.51 Aligned_cols=174 Identities=19% Similarity=0.161 Sum_probs=108.9
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
..+-.+|+|+||+|.+|+-+++.|.++|+.|.+..|+.+..++... +.........+..|.....++..-+.... .
T Consensus 76 ~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~~~~d~~~~~v~~~~~~~~d~~~~~~~~~---~ 151 (411)
T KOG1203|consen 76 SKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-VFFVDLGLQNVEADVVTAIDILKKLVEAV---P 151 (411)
T ss_pred CCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-ccccccccceeeeccccccchhhhhhhhc---c
Confidence 3567899999999999999999999999999999999998887766 21112233444455554444333222211 1
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
....+++.++|.-+... +..--..+...|..+++.++ +..+-.|++++||+.+....+....+.. .+
T Consensus 152 ~~~~~v~~~~ggrp~~e-------d~~~p~~VD~~g~knlvdA~----~~aGvk~~vlv~si~~~~~~~~~~~~~~--~~ 218 (411)
T KOG1203|consen 152 KGVVIVIKGAGGRPEEE-------DIVTPEKVDYEGTKNLVDAC----KKAGVKRVVLVGSIGGTKFNQPPNILLL--NG 218 (411)
T ss_pred ccceeEEecccCCCCcc-------cCCCcceecHHHHHHHHHHH----HHhCCceEEEEEeecCcccCCCchhhhh--hh
Confidence 12456666666443321 12223345677778888887 5556679999999887655443333331 11
Q ss_pred HHHHH-HHHHHHHccCCcEEEEEecCcccCCc
Q 024752 170 MNQLT-KNLACEWAKDKIRVNTVAPWVIRTPL 200 (263)
Q Consensus 170 ~~~~~-~~~a~e~~~~gi~v~~v~PG~v~t~~ 200 (263)
+..-. +....++...|+.-..|.||..+.+.
T Consensus 219 ~~~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~~ 250 (411)
T KOG1203|consen 219 LVLKAKLKAEKFLQDSGLPYTIIRPGGLEQDT 250 (411)
T ss_pred hhhHHHHhHHHHHHhcCCCcEEEeccccccCC
Confidence 11111 12333445679999999999886543
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.60 E-value=4e-06 Score=64.70 Aligned_cols=185 Identities=14% Similarity=0.093 Sum_probs=117.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
+++.|.||||-.|..|+++..++|+.|+++.|++.+.... ..+..++.|+.+++++.+.+ ...|
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~--------~~~~i~q~Difd~~~~a~~l--------~g~D 64 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR--------QGVTILQKDIFDLTSLASDL--------AGHD 64 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc--------ccceeecccccChhhhHhhh--------cCCc
Confidence 4678999999999999999999999999999999876543 13567789999998886665 4689
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC--------CC--Ccch
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI--------PM--CSIY 163 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~--------~~--~~~Y 163 (263)
+||..-|...++. .+. +....+++...++..+..|++.|+...+..-. |. ...|
T Consensus 65 aVIsA~~~~~~~~-----~~~-----------~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~ 128 (211)
T COG2910 65 AVISAFGAGASDN-----DEL-----------HSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYK 128 (211)
T ss_pred eEEEeccCCCCCh-----hHH-----------HHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHH
Confidence 9999888654332 111 11224555666677678899999987765422 22 2234
Q ss_pred hhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccc--cccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHc
Q 024752 164 ASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLD--TVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC 240 (263)
Q Consensus 164 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~ 240 (263)
..+++..+ +.+.|..+ .++.-+-++|-..-.|..+ .+.... +.+.....-....+.+|.|-+++--+
T Consensus 129 ~~A~~~ae-~L~~Lr~~---~~l~WTfvSPaa~f~PGerTg~yrlgg------D~ll~n~~G~SrIS~aDYAiA~lDe~ 197 (211)
T COG2910 129 PEALAQAE-FLDSLRAE---KSLDWTFVSPAAFFEPGERTGNYRLGG------DQLLVNAKGESRISYADYAIAVLDEL 197 (211)
T ss_pred HHHHHHHH-HHHHHhhc---cCcceEEeCcHHhcCCccccCceEecc------ceEEEcCCCceeeeHHHHHHHHHHHH
Confidence 44444444 33445444 3588888999877666321 111111 11111112224566778777765433
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.46 E-value=2.6e-07 Score=74.33 Aligned_cols=220 Identities=17% Similarity=0.066 Sum_probs=136.1
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHH-HHHHHHHh-----cCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN-QRIQEWKS-----KGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
.|++||||-+|-=|+.+++-|+..|+.|-.+-|...... ..++.+.. .+........|++|...+.+++..+
T Consensus 28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i-- 105 (376)
T KOG1372|consen 28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI-- 105 (376)
T ss_pred ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc--
Confidence 369999999999999999999999999988777654332 22233322 2455667779999999999998865
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccc-----------c
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGV-----------I 155 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~-----------~ 155 (263)
+++-+.|.|+.++..- +.+--+..-++...|++.++.++...-... +-++--.|+..-+ .
T Consensus 106 ----kPtEiYnLaAQSHVkv----SFdlpeYTAeVdavGtLRlLdAi~~c~l~~-~VrfYQAstSElyGkv~e~PQsE~T 176 (376)
T KOG1372|consen 106 ----KPTEVYNLAAQSHVKV----SFDLPEYTAEVDAVGTLRLLDAIRACRLTE-KVRFYQASTSELYGKVQEIPQSETT 176 (376)
T ss_pred ----CchhhhhhhhhcceEE----EeecccceeeccchhhhhHHHHHHhcCccc-ceeEEecccHhhcccccCCCcccCC
Confidence 6788889999877653 233334556778899999988875443222 2344433332211 1
Q ss_pred cCCCCcchhhHHHHHHHHHHHHHHHH---ccCCcEEEEEecCcccCCccccccccch---hH-HHHHHhHhcCCCCCCCC
Q 024752 156 AIPMCSIYASSKVAMNQLTKNLACEW---AKDKIRVNTVAPWVIRTPLLDTVEKDSN---FL-EHANRMVLRTPMLRPGE 228 (263)
Q Consensus 156 ~~~~~~~Y~~sK~a~~~~~~~~a~e~---~~~gi~v~~v~PG~v~t~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~ 228 (263)
+..+.++|+++|-+...++-.++..| +..||-+|.-+|--=++-..+.....-. .. +....+.+......|+.
T Consensus 177 PFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGh 256 (376)
T KOG1372|consen 177 PFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGH 256 (376)
T ss_pred CCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccch
Confidence 33456789999999887776666554 4567777766663211111111110000 00 00001111234566788
Q ss_pred hhhHHHHHHHHcCCC
Q 024752 229 PNEVSSVVAFLCLSA 243 (263)
Q Consensus 229 ~~~va~~~~~l~s~~ 243 (263)
..|-+++...++..+
T Consensus 257 A~dYVEAMW~mLQ~d 271 (376)
T KOG1372|consen 257 AGDYVEAMWLMLQQD 271 (376)
T ss_pred hHHHHHHHHHHHhcC
Confidence 888888876665543
|
|
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=4.1e-07 Score=74.27 Aligned_cols=86 Identities=23% Similarity=0.189 Sum_probs=54.8
Q ss_pred CCCCEEEEecCC----------------CchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCH
Q 024752 11 LKGMTALVTGGT----------------KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR 74 (263)
Q Consensus 11 ~~~k~vlVtGas----------------~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 74 (263)
|+||+||||+|. |.+|.++|+.|.++|+.|+++++......... ..+.....+..|
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~----~~~~~~~~V~s~---- 72 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDI----NNQLELHPFEGI---- 72 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCccc----CCceeEEEEecH----
Confidence 579999999886 99999999999999999998886432111000 001122333332
Q ss_pred HHHHHHHHHHHhhcCCCccEEEeCCCCCCCCC
Q 024752 75 AQREKLMETVSSQFDGKLNILINNAGTFIPKE 106 (263)
Q Consensus 75 ~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~ 106 (263)
.++...+.++.+. .++|++||+|++....+
T Consensus 73 ~d~~~~l~~~~~~--~~~D~VIH~AAvsD~~~ 102 (229)
T PRK09620 73 IDLQDKMKSIITH--EKVDAVIMAAAGSDWVV 102 (229)
T ss_pred HHHHHHHHHHhcc--cCCCEEEECccccceec
Confidence 2222333333322 36899999999986654
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=98.32 E-value=5.1e-06 Score=62.31 Aligned_cols=79 Identities=28% Similarity=0.404 Sum_probs=60.1
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAI-VHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
++++|+++|.|+ ||.|++++..|++.|++ |.++.|+.++++++.+++. +..+..... .+ +.+.+
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~--~~~~~~~~~--~~---~~~~~------- 73 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFG--GVNIEAIPL--ED---LEEAL------- 73 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHT--GCSEEEEEG--GG---HCHHH-------
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcC--ccccceeeH--HH---HHHHH-------
Confidence 799999999998 89999999999999996 9999999999999988872 223444333 22 22222
Q ss_pred CCCccEEEeCCCCCCC
Q 024752 89 DGKLNILINNAGTFIP 104 (263)
Q Consensus 89 ~~~id~li~~ag~~~~ 104 (263)
...|++|++.+....
T Consensus 74 -~~~DivI~aT~~~~~ 88 (135)
T PF01488_consen 74 -QEADIVINATPSGMP 88 (135)
T ss_dssp -HTESEEEE-SSTTST
T ss_pred -hhCCeEEEecCCCCc
Confidence 367999999887544
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.29 E-value=6.2e-06 Score=66.09 Aligned_cols=163 Identities=18% Similarity=0.243 Sum_probs=109.1
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHC-CC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAF-GA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~-g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
+.+-+..++||||+-|-+|..+|..|..+ |- .|++.+.-.....-+ ..| -++..|+-|..++++++-
T Consensus 39 s~~~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~-----~~G---PyIy~DILD~K~L~eIVV--- 107 (366)
T KOG2774|consen 39 SQTQKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVT-----DVG---PYIYLDILDQKSLEEIVV--- 107 (366)
T ss_pred cccCCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhhc-----ccC---CchhhhhhccccHHHhhc---
Confidence 34566789999999999999999998865 65 577776544332111 112 256688888888777764
Q ss_pred hhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC-------C
Q 024752 86 SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI-------P 158 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-------~ 158 (263)
..+||-+||-.+....- .+...--..++|+.|..++++.+..+ .--+|+-|.-+.++. |
T Consensus 108 ---n~RIdWL~HfSALLSAv-----GE~NVpLA~~VNI~GvHNil~vAa~~------kL~iFVPSTIGAFGPtSPRNPTP 173 (366)
T KOG2774|consen 108 ---NKRIDWLVHFSALLSAV-----GETNVPLALQVNIRGVHNILQVAAKH------KLKVFVPSTIGAFGPTSPRNPTP 173 (366)
T ss_pred ---ccccceeeeHHHHHHHh-----cccCCceeeeecchhhhHHHHHHHHc------CeeEeecccccccCCCCCCCCCC
Confidence 26899999987654221 22233345789999999999987332 233555554444431 1
Q ss_pred ------CCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEe-cCcccC
Q 024752 159 ------MCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVA-PWVIRT 198 (263)
Q Consensus 159 ------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~-PG~v~t 198 (263)
+...|+.||.-.|.+-+.+...| |+.+.++. ||.+..
T Consensus 174 dltIQRPRTIYGVSKVHAEL~GEy~~hrF---g~dfr~~rfPg~is~ 217 (366)
T KOG2774|consen 174 DLTIQRPRTIYGVSKVHAELLGEYFNHRF---GVDFRSMRFPGIISA 217 (366)
T ss_pred CeeeecCceeechhHHHHHHHHHHHHhhc---CccceecccCccccc
Confidence 22459999999999998886665 77776664 666643
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.28 E-value=1.4e-05 Score=68.65 Aligned_cols=148 Identities=11% Similarity=0.046 Sum_probs=95.4
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
.++|.|+|++|.+|.+++..|+..+. .++++++++ .+....++....... ...++++.++..+.+ .
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~~~~~--~i~~~~~~~d~~~~l--------~ 85 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHINTPA--QVRGFLGDDQLGDAL--------K 85 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhCCcCc--eEEEEeCCCCHHHHc--------C
Confidence 46899999999999999999997765 799999987 222222333222211 222433333333333 4
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcc-ccc----c--------ccC
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISS-VAG----V--------IAI 157 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS-~~~----~--------~~~ 157 (263)
..|++|+.||..... .+++++.+..|.-....+.+.+ .+....++++++| ... . .+.
T Consensus 86 ~aDiVVitAG~~~~~------g~~R~dll~~N~~i~~~i~~~i----~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~ 155 (323)
T PLN00106 86 GADLVIIPAGVPRKP------GMTRDDLFNINAGIVKTLCEAV----AKHCPNALVNIISNPVNSTVPIAAEVLKKAGVY 155 (323)
T ss_pred CCCEEEEeCCCCCCC------CCCHHHHHHHHHHHHHHHHHHH----HHHCCCeEEEEeCCCccccHHHHHHHHHHcCCC
Confidence 689999999975331 2346777888887766666555 5554445555554 432 1 245
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHc
Q 024752 158 PMCSIYASSKVAMNQLTKNLACEWA 182 (263)
Q Consensus 158 ~~~~~Y~~sK~a~~~~~~~~a~e~~ 182 (263)
|....|+.++.-...|-..++.++.
T Consensus 156 p~~~viG~~~LDs~Rl~~~lA~~lg 180 (323)
T PLN00106 156 DPKKLFGVTTLDVVRANTFVAEKKG 180 (323)
T ss_pred CcceEEEEecchHHHHHHHHHHHhC
Confidence 6677899988666678888888875
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=98.28 E-value=5e-06 Score=75.07 Aligned_cols=78 Identities=22% Similarity=0.317 Sum_probs=59.8
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc-hhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE-TELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
|++++|+++|+|+++ +|.++|+.|+++|++|.+++++. +..++..+++...+ +..+..|..+. .
T Consensus 1 ~~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~------------~ 65 (450)
T PRK14106 1 MELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELG--IELVLGEYPEE------------F 65 (450)
T ss_pred CCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC--CEEEeCCcchh------------H
Confidence 468899999999888 99999999999999999999985 44445455554433 44566777651 1
Q ss_pred cCCCccEEEeCCCCC
Q 024752 88 FDGKLNILINNAGTF 102 (263)
Q Consensus 88 ~~~~id~li~~ag~~ 102 (263)
. +.+|+||+++|+.
T Consensus 66 ~-~~~d~vv~~~g~~ 79 (450)
T PRK14106 66 L-EGVDLVVVSPGVP 79 (450)
T ss_pred h-hcCCEEEECCCCC
Confidence 1 5789999999975
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.21 E-value=7.3e-06 Score=71.44 Aligned_cols=77 Identities=25% Similarity=0.303 Sum_probs=66.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC-CeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
+++||.|+ |++|+.+|..|+++| .+|.+.+|+.++..++..... .++..+++|+.+.+++.++++ ..
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~---~~v~~~~vD~~d~~al~~li~--------~~ 69 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIG---GKVEALQVDAADVDALVALIK--------DF 69 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhcc---ccceeEEecccChHHHHHHHh--------cC
Confidence 67899999 999999999999999 799999999998887765532 378899999999999988885 33
Q ss_pred cEEEeCCCCC
Q 024752 93 NILINNAGTF 102 (263)
Q Consensus 93 d~li~~ag~~ 102 (263)
|++||++...
T Consensus 70 d~VIn~~p~~ 79 (389)
T COG1748 70 DLVINAAPPF 79 (389)
T ss_pred CEEEEeCCch
Confidence 9999999865
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.17 E-value=1.3e-05 Score=69.02 Aligned_cols=75 Identities=25% Similarity=0.221 Sum_probs=56.3
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHC-C-CeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAF-G-AIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~-g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
.++++|+++||||+|.||+.++++|+++ | .++++++|+..++..+..++.. .|+. ++.+
T Consensus 151 ~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~---------~~i~---~l~~------- 211 (340)
T PRK14982 151 IDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG---------GKIL---SLEE------- 211 (340)
T ss_pred cCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc---------ccHH---hHHH-------
Confidence 3689999999999999999999999865 5 4899999998888777665421 1221 1222
Q ss_pred hcCCCccEEEeCCCCCC
Q 024752 87 QFDGKLNILINNAGTFI 103 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~ 103 (263)
.+ ...|++|+.++...
T Consensus 212 ~l-~~aDiVv~~ts~~~ 227 (340)
T PRK14982 212 AL-PEADIVVWVASMPK 227 (340)
T ss_pred HH-ccCCEEEECCcCCc
Confidence 22 46899999999754
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.16 E-value=2.1e-05 Score=67.52 Aligned_cols=147 Identities=15% Similarity=0.046 Sum_probs=92.1
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCC--CeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
++.++|.|+|++|.+|..++..|+..+ ..+++++++. .+....++...... ....+.+++.+..+.+
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~--~~g~a~Dl~~~~~~--~~v~~~td~~~~~~~l------- 74 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG--APGVAADLSHIDTP--AKVTGYADGELWEKAL------- 74 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC--CcccccchhhcCcC--ceEEEecCCCchHHHh-------
Confidence 566799999999999999999999665 4799999932 22222233322222 2234555544422332
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccc-------------c
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGV-------------I 155 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~-------------~ 155 (263)
...|++|+++|.... +.+++.+.+..|+.....+.+++ ++.+..++|+++|-... .
T Consensus 75 -~gaDvVVitaG~~~~------~~~tR~dll~~N~~i~~~i~~~i----~~~~~~~iviv~SNPvdv~~~~~~~~~~~~s 143 (321)
T PTZ00325 75 -RGADLVLICAGVPRK------PGMTRDDLFNTNAPIVRDLVAAV----ASSAPKAIVGIVSNPVNSTVPIAAETLKKAG 143 (321)
T ss_pred -CCCCEEEECCCCCCC------CCCCHHHHHHHHHHHHHHHHHHH----HHHCCCeEEEEecCcHHHHHHHHHhhhhhcc
Confidence 468999999997432 12346777888886666555555 66666678888774421 2
Q ss_pred cCCCCcchhhHHHHHHH--HHHHHHHHH
Q 024752 156 AIPMCSIYASSKVAMNQ--LTKNLACEW 181 (263)
Q Consensus 156 ~~~~~~~Y~~sK~a~~~--~~~~~a~e~ 181 (263)
+.|....|+.+ .|++ |-..++..+
T Consensus 144 g~p~~~viG~g--~LDs~R~r~~la~~l 169 (321)
T PTZ00325 144 VYDPRKLFGVT--TLDVVRARKFVAEAL 169 (321)
T ss_pred CCChhheeech--hHHHHHHHHHHHHHh
Confidence 34556678886 2553 445555555
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.13 E-value=1.3e-05 Score=61.47 Aligned_cols=158 Identities=17% Similarity=0.146 Sum_probs=103.7
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
+-++++.++|.||+|-.|..+.+++++.+. +|+++.|.+....++ +..+.....|.+..++.....
T Consensus 14 f~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at-------~k~v~q~~vDf~Kl~~~a~~~----- 81 (238)
T KOG4039|consen 14 FRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT-------DKVVAQVEVDFSKLSQLATNE----- 81 (238)
T ss_pred HhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc-------cceeeeEEechHHHHHHHhhh-----
Confidence 568899999999999999999999999986 799999875332222 233455567776555443332
Q ss_pred hcCCCccEEEeCCCCCCCCC-CCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhh
Q 024752 87 QFDGKLNILINNAGTFIPKE-TTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYAS 165 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~ 165 (263)
..+|+++++-|...... .+.+ +.+.---.+.+++++ ++++-.+|+.+||..+...+ ...|--
T Consensus 82 ---qg~dV~FcaLgTTRgkaGadgf--------ykvDhDyvl~~A~~A----Ke~Gck~fvLvSS~GAd~sS--rFlY~k 144 (238)
T KOG4039|consen 82 ---QGPDVLFCALGTTRGKAGADGF--------YKVDHDYVLQLAQAA----KEKGCKTFVLVSSAGADPSS--RFLYMK 144 (238)
T ss_pred ---cCCceEEEeecccccccccCce--------EeechHHHHHHHHHH----HhCCCeEEEEEeccCCCccc--ceeeee
Confidence 46899999988653321 1111 111111112333443 56667799999998776543 345778
Q ss_pred HHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcc
Q 024752 166 SKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLL 201 (263)
Q Consensus 166 sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~ 201 (263)
.|.-++.=+..|-.+ ++..++||++..+..
T Consensus 145 ~KGEvE~~v~eL~F~------~~~i~RPG~ll~~R~ 174 (238)
T KOG4039|consen 145 MKGEVERDVIELDFK------HIIILRPGPLLGERT 174 (238)
T ss_pred ccchhhhhhhhcccc------EEEEecCcceecccc
Confidence 888887766544322 677889999976554
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=98.13 E-value=1.5e-05 Score=70.52 Aligned_cols=76 Identities=26% Similarity=0.356 Sum_probs=60.1
Q ss_pred EEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 16 ALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 16 vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
|+|.|+ |.+|+.+++.|++.+- +|++.+|+.++++++.+++ .+.++....+|+.|.+++.++++ .-|
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~~--------~~d 69 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL--LGDRVEAVQVDVNDPESLAELLR--------GCD 69 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT----TTTTEEEEE--TTTHHHHHHHHT--------TSS
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc--cccceeEEEEecCCHHHHHHHHh--------cCC
Confidence 689999 9999999999999874 7999999999988887665 45679999999999999888874 459
Q ss_pred EEEeCCCCC
Q 024752 94 ILINNAGTF 102 (263)
Q Consensus 94 ~li~~ag~~ 102 (263)
++||++|..
T Consensus 70 vVin~~gp~ 78 (386)
T PF03435_consen 70 VVINCAGPF 78 (386)
T ss_dssp EEEE-SSGG
T ss_pred EEEECCccc
Confidence 999999964
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.99 E-value=3.1e-05 Score=65.69 Aligned_cols=80 Identities=19% Similarity=0.281 Sum_probs=69.0
Q ss_pred EEEEecCCCchHHHHHHHHHH----CCCeEEEeeCCchhHHHHHHHHHhcC----CceEEEeccCCCHHHHHHHHHHHHh
Q 024752 15 TALVTGGTKGIGYAVVEELAA----FGAIVHTCSRNETELNQRIQEWKSKG----LQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~----~g~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
-++|.||||..|.-+++++.+ .|..+.+.+|+++++++.++.+.+.. .....+.||.+|++++.+.+.+
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~--- 83 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQ--- 83 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhh---
Confidence 479999999999999999999 78899999999999999999887653 2233788999999999998864
Q ss_pred hcCCCccEEEeCCCCC
Q 024752 87 QFDGKLNILINNAGTF 102 (263)
Q Consensus 87 ~~~~~id~li~~ag~~ 102 (263)
-.+++||+|..
T Consensus 84 -----~~vivN~vGPy 94 (423)
T KOG2733|consen 84 -----ARVIVNCVGPY 94 (423)
T ss_pred -----hEEEEeccccc
Confidence 48999999965
|
|
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=97.97 E-value=0.00015 Score=61.77 Aligned_cols=79 Identities=19% Similarity=0.313 Sum_probs=55.2
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
+|++++|+|+++++|.++++.+...|++|++++++++..+.+ .+ .+.+. ..|..+++..+.+.+.. . +..
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~---~g~~~---~~~~~~~~~~~~~~~~~-~--~~~ 213 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV-RQ---AGADA---VFNYRAEDLADRILAAT-A--GQG 213 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HH---cCCCE---EEeCCCcCHHHHHHHHc-C--CCc
Confidence 589999999999999999999999999999999988765544 22 22221 23444444333332222 1 136
Q ss_pred ccEEEeCCC
Q 024752 92 LNILINNAG 100 (263)
Q Consensus 92 id~li~~ag 100 (263)
+|.+++++|
T Consensus 214 ~d~vi~~~~ 222 (325)
T cd08253 214 VDVIIEVLA 222 (325)
T ss_pred eEEEEECCc
Confidence 999999987
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.94 E-value=5e-05 Score=65.49 Aligned_cols=118 Identities=14% Similarity=0.158 Sum_probs=70.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC-------CeEEEeeCCchh--HHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHH
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFG-------AIVHTCSRNETE--LNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g-------~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 84 (263)
-+++||||+|.+|.+++..|+..+ ..|+++++++.. ++....++... ......|++...+..+.+
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~---~~~~~~~~~~~~~~~~~l--- 76 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDC---AFPLLKSVVATTDPEEAF--- 76 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhc---cccccCCceecCCHHHHh---
Confidence 368999999999999999999854 589999996532 22211111110 001112333222222222
Q ss_pred HhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC--CCceEEEEcccc
Q 024752 85 SSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA--GNGNIIFISSVA 152 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~iv~vsS~~ 152 (263)
...|+||+.||..... ..+ -.+.++.|+ .+++.+.+.+.+. ..+.+|.+|...
T Consensus 77 -----~~aDiVI~tAG~~~~~---~~~---R~~l~~~N~----~i~~~i~~~i~~~~~~~~iiivvsNPv 131 (325)
T cd01336 77 -----KDVDVAILVGAMPRKE---GME---RKDLLKANV----KIFKEQGEALDKYAKKNVKVLVVGNPA 131 (325)
T ss_pred -----CCCCEEEEeCCcCCCC---CCC---HHHHHHHHH----HHHHHHHHHHHHhCCCCeEEEEecCcH
Confidence 4689999999985332 122 255666666 4556666666665 367777777644
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.92 E-value=3.1e-05 Score=69.88 Aligned_cols=82 Identities=22% Similarity=0.287 Sum_probs=56.8
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
|++++|+++|||+++ +|.++|+.|++.|++|++.+++........+++...+..+. ... +..++ .+
T Consensus 1 ~~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~--~~~--~~~~~---~~------ 66 (447)
T PRK02472 1 TEYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVI--CGS--HPLEL---LD------ 66 (447)
T ss_pred CCcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEE--eCC--CCHHH---hc------
Confidence 567899999999986 99999999999999999999876554444455554443322 111 11111 10
Q ss_pred CCCccEEEeCCCCCCCC
Q 024752 89 DGKLNILINNAGTFIPK 105 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~ 105 (263)
..+|+||+++|+....
T Consensus 67 -~~~d~vV~s~gi~~~~ 82 (447)
T PRK02472 67 -EDFDLMVKNPGIPYTN 82 (447)
T ss_pred -CcCCEEEECCCCCCCC
Confidence 2489999999986543
|
|
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.91 E-value=8.5e-05 Score=56.83 Aligned_cols=81 Identities=20% Similarity=0.240 Sum_probs=59.5
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCC-CeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
...++++++++|+|+ |++|.++++.|.+.| .+|.+++|+++..++..+++.... +..+.++.++.
T Consensus 13 ~~~~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-------- 78 (155)
T cd01065 13 AGIELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-----IAIAYLDLEEL-------- 78 (155)
T ss_pred hCCCCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-----cceeecchhhc--------
Confidence 345688999999998 899999999999996 789999999988887776654321 12233333221
Q ss_pred hhcCCCccEEEeCCCCCCC
Q 024752 86 SQFDGKLNILINNAGTFIP 104 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~ 104 (263)
. ...|++|++.+....
T Consensus 79 --~-~~~Dvvi~~~~~~~~ 94 (155)
T cd01065 79 --L-AEADLIINTTPVGMK 94 (155)
T ss_pred --c-ccCCEEEeCcCCCCC
Confidence 1 578999999986543
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=97.87 E-value=6.1e-05 Score=59.44 Aligned_cols=81 Identities=23% Similarity=0.208 Sum_probs=50.1
Q ss_pred CCCCEEEEecCC----------------CchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCH
Q 024752 11 LKGMTALVTGGT----------------KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR 74 (263)
Q Consensus 11 ~~~k~vlVtGas----------------~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 74 (263)
|+||+||||+|. |-.|.++|+.+..+|+.|+++..... ... ...+.. .++...
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~--------p~~~~~--i~v~sa 69 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP--------PPGVKV--IRVESA 69 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS-------------TTEEE--EE-SSH
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc--------cccceE--EEecch
Confidence 689999999886 78899999999999999999888742 110 122333 345555
Q ss_pred HHHHHHHHHHHhhcCCCccEEEeCCCCCCCCC
Q 024752 75 AQREKLMETVSSQFDGKLNILINNAGTFIPKE 106 (263)
Q Consensus 75 ~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~ 106 (263)
+++.+.+. +.+ ..-|++|++|++....+
T Consensus 70 ~em~~~~~---~~~-~~~Di~I~aAAVsDf~p 97 (185)
T PF04127_consen 70 EEMLEAVK---ELL-PSADIIIMAAAVSDFRP 97 (185)
T ss_dssp HHHHHHHH---HHG-GGGSEEEE-SB--SEEE
T ss_pred hhhhhhhc---ccc-CcceeEEEecchhheee
Confidence 55555544 444 34599999999986644
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00017 Score=60.59 Aligned_cols=79 Identities=16% Similarity=0.217 Sum_probs=58.7
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
...++|+++|+|+ ||+|++++..|++.|++|.+++|+.++.+++.+++...+. +.....| + . ..
T Consensus 113 ~~~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~-~~~~~~~-----~---~------~~ 176 (270)
T TIGR00507 113 PLRPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGE-IQAFSMD-----E---L------PL 176 (270)
T ss_pred CCccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCc-eEEechh-----h---h------cc
Confidence 4467899999999 6999999999999999999999999988888877654322 2221111 1 0 11
Q ss_pred CCCccEEEeCCCCCCC
Q 024752 89 DGKLNILINNAGTFIP 104 (263)
Q Consensus 89 ~~~id~li~~ag~~~~ 104 (263)
...|++||+.+....
T Consensus 177 -~~~DivInatp~gm~ 191 (270)
T TIGR00507 177 -HRVDLIINATSAGMS 191 (270)
T ss_pred -cCccEEEECCCCCCC
Confidence 468999999987643
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.80 E-value=9.1e-05 Score=62.56 Aligned_cols=79 Identities=22% Similarity=0.361 Sum_probs=58.1
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCC-CeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
..++++|+++|+|+ ||+|++++..|++.| .+|++++|+.++.+++.+++.... .+. .++ +...
T Consensus 118 ~~~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~-~~~---~~~----~~~~------- 181 (278)
T PRK00258 118 GVDLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG-KAE---LDL----ELQE------- 181 (278)
T ss_pred CCCCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc-cee---ecc----cchh-------
Confidence 45789999999997 899999999999999 689999999998888877764321 011 111 1111
Q ss_pred hcCCCccEEEeCCCCCC
Q 024752 87 QFDGKLNILINNAGTFI 103 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~ 103 (263)
.. ...|++||+....-
T Consensus 182 ~~-~~~DivInaTp~g~ 197 (278)
T PRK00258 182 EL-ADFDLIINATSAGM 197 (278)
T ss_pred cc-ccCCEEEECCcCCC
Confidence 11 46899999987654
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00063 Score=72.44 Aligned_cols=179 Identities=15% Similarity=0.139 Sum_probs=113.6
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
.+.++.++|++.+++++.+++.+|.++|+.|+.+..... ..+........+-.+...-.+.+++..+++.+....
T Consensus 1752 ~~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 1826 (2582)
T TIGR02813 1752 KQSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWV----VSHSASPLASAIASVTLGTIDDTSIEAVIKDIEEKT- 1826 (2582)
T ss_pred cccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeecccc----ccccccccccccccccccccchHHHHHHHHhhhccc-
Confidence 355788999988999999999999999999887643221 000000001111222344445677777777776654
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcch------
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIY------ 163 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y------ 163 (263)
+.++.+||..+...... ...+...+...-...+...|.++|.+.+.+...+++.++.++...+..++......
T Consensus 1827 ~~~~g~i~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~~~vsr~~G~~g~~~~~~~~~~~~~ 1905 (2582)
T TIGR02813 1827 AQIDGFIHLQPQHKSVA-DKVDAIELPEAAKQSLMLAFLFAKLLNVKLATNARASFVTVSRIDGGFGYSNGDADSGTQQV 1905 (2582)
T ss_pred cccceEEEecccccccc-ccccccccchhhHHHHHHHHHHHHhhchhhccCCCeEEEEEEecCCccccCCcccccccccc
Confidence 78999999877543210 00000011111113344457777777676666667899999998877775432221
Q ss_pred --hhHHHHHHHHHHHHHHHHccCCcEEEEEecC
Q 024752 164 --ASSKVAMNQLTKNLACEWAKDKIRVNTVAPW 194 (263)
Q Consensus 164 --~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG 194 (263)
....+++.+|+|+++.|+...-+|...+.|.
T Consensus 1906 ~~~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~ 1938 (2582)
T TIGR02813 1906 KAELNQAALAGLTKTLNHEWNAVFCRALDLAPK 1938 (2582)
T ss_pred ccchhhhhHHHHHHhHHHHCCCCeEEEEeCCCC
Confidence 3458899999999999998777777777775
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00021 Score=65.73 Aligned_cols=49 Identities=22% Similarity=0.181 Sum_probs=43.6
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHH
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEW 57 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~ 57 (263)
..++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++
T Consensus 374 ~~~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l 422 (529)
T PLN02520 374 GSPLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV 422 (529)
T ss_pred ccCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence 35688999999999 69999999999999999999999988888777654
|
|
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00091 Score=57.47 Aligned_cols=79 Identities=25% Similarity=0.416 Sum_probs=56.8
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
++++++|+|+++++|.++++.+...|++|+.++++.+..+.+ .+ .+.. ...|..+.+....+.+... .+.
T Consensus 166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~---~~~~---~~~~~~~~~~~~~~~~~~~---~~~ 235 (342)
T cd08266 166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KE---LGAD---YVIDYRKEDFVREVRELTG---KRG 235 (342)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HH---cCCC---eEEecCChHHHHHHHHHhC---CCC
Confidence 578999999999999999999999999999999988765543 22 2221 1235555555554443332 146
Q ss_pred ccEEEeCCC
Q 024752 92 LNILINNAG 100 (263)
Q Consensus 92 id~li~~ag 100 (263)
+|.+++++|
T Consensus 236 ~d~~i~~~g 244 (342)
T cd08266 236 VDVVVEHVG 244 (342)
T ss_pred CcEEEECCc
Confidence 999999988
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00078 Score=58.22 Aligned_cols=78 Identities=24% Similarity=0.426 Sum_probs=54.0
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC-C
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG-K 91 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~-~ 91 (263)
|+++||+||+||+|...++.....|+.++++..+.++.+ ...+ .+.... .|..+++ +.+++++..++ .
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~---lGAd~v---i~y~~~~----~~~~v~~~t~g~g 211 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKE---LGADHV---INYREED----FVEQVRELTGGKG 211 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHh---cCCCEE---EcCCccc----HHHHHHHHcCCCC
Confidence 899999999999999999999999987777777666655 4433 333222 2233222 44555554434 5
Q ss_pred ccEEEeCCCC
Q 024752 92 LNILINNAGT 101 (263)
Q Consensus 92 id~li~~ag~ 101 (263)
+|+++...|.
T Consensus 212 vDvv~D~vG~ 221 (326)
T COG0604 212 VDVVLDTVGG 221 (326)
T ss_pred ceEEEECCCH
Confidence 9999999984
|
|
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00051 Score=59.17 Aligned_cols=149 Identities=13% Similarity=0.112 Sum_probs=95.0
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCC-------eEEEeeCCchh--HHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHH
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGA-------IVHTCSRNETE--LNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMET 83 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~-------~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 83 (263)
-++|.|+|++|.+|.+++..|+..|. .++++++++.. ++..+.++...-..... ...++. ++ .+.
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~-~~~i~~-~~----~~~ 75 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLA-EIVITD-DP----NVA 75 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccC-ceEEec-Cc----HHH
Confidence 46899999999999999999998876 69999995433 44444444322100000 001110 01 111
Q ss_pred HHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC--CceEEEEcccccc-------
Q 024752 84 VSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG--NGNIIFISSVAGV------- 154 (263)
Q Consensus 84 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~vsS~~~~------- 154 (263)
+ ..-|++|..||.... + ..+ -.+.+..|+ .+++.+.+.+.+.. .+.+|.+|-....
T Consensus 76 ----~-~daDivvitaG~~~k-~--g~t---R~dll~~N~----~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k 140 (322)
T cd01338 76 ----F-KDADWALLVGAKPRG-P--GME---RADLLKANG----KIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAMK 140 (322)
T ss_pred ----h-CCCCEEEEeCCCCCC-C--CCc---HHHHHHHHH----HHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHHH
Confidence 1 467999999997432 2 123 344566665 56666666666653 6777777764432
Q ss_pred -c-cCCCCcchhhHHHHHHHHHHHHHHHHc
Q 024752 155 -I-AIPMCSIYASSKVAMNQLTKNLACEWA 182 (263)
Q Consensus 155 -~-~~~~~~~Y~~sK~a~~~~~~~~a~e~~ 182 (263)
. +.|....|+.++.--..|...+++.+.
T Consensus 141 ~sg~~p~~~ViG~t~LDs~Rl~~~la~~lg 170 (322)
T cd01338 141 NAPDIPPDNFTAMTRLDHNRAKSQLAKKAG 170 (322)
T ss_pred HcCCCChHheEEehHHHHHHHHHHHHHHhC
Confidence 2 266677899999999999999998885
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00084 Score=57.83 Aligned_cols=113 Identities=17% Similarity=0.178 Sum_probs=69.2
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-------eEEEeeCCc--hhHHHHHHHHHhcCCceEEEeccCCCHHHHH----HHH
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGA-------IVHTCSRNE--TELNQRIQEWKSKGLQVSGSVCDLKIRAQRE----KLM 81 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~----~~~ 81 (263)
+|.|+||+|.+|..++..|+..|. .++++++++ +.++ ....|+.+..... ...
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~--------------g~~~Dl~d~~~~~~~~~~i~ 67 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALE--------------GVVMELQDCAFPLLKGVVIT 67 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccc--------------eeeeehhhhcccccCCcEEe
Confidence 589999999999999999998663 499999987 4322 2233433321000 000
Q ss_pred HHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC--CCceEEEEcccc
Q 024752 82 ETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA--GNGNIIFISSVA 152 (263)
Q Consensus 82 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~iv~vsS~~ 152 (263)
....+.+ ...|++|+.||..... .++-.+.+..|+ .+++.+.+.+.+. +.+.+|.+|-..
T Consensus 68 ~~~~~~~-~~aDiVVitAG~~~~~------g~tR~dll~~N~----~i~~~i~~~i~~~~~~~~iiivvsNPv 129 (323)
T cd00704 68 TDPEEAF-KDVDVAILVGAFPRKP------GMERADLLRKNA----KIFKEQGEALNKVAKPTVKVLVVGNPA 129 (323)
T ss_pred cChHHHh-CCCCEEEEeCCCCCCc------CCcHHHHHHHhH----HHHHHHHHHHHHhCCCCeEEEEeCCcH
Confidence 1111222 5689999999975321 123445666665 5667777777766 356777776443
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.001 Score=58.94 Aligned_cols=83 Identities=11% Similarity=0.039 Sum_probs=58.7
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
+.|+|||||++..+|.++++.|.+.|++|++++.++.......+.+. ....+...-.+++...+.+.++.++. +
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d----~~~~~p~p~~d~~~~~~~L~~i~~~~--~ 76 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAVD----GFYTIPSPRWDPDAYIQALLSIVQRE--N 76 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhhh----heEEeCCCCCCHHHHHHHHHHHHHHc--C
Confidence 46899999999999999999999999999999998765433222221 12233333445555556666666653 6
Q ss_pred ccEEEeCCC
Q 024752 92 LNILINNAG 100 (263)
Q Consensus 92 id~li~~ag 100 (263)
+|++|....
T Consensus 77 id~vIP~~e 85 (389)
T PRK06849 77 IDLLIPTCE 85 (389)
T ss_pred CCEEEECCh
Confidence 899998765
|
|
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.001 Score=57.28 Aligned_cols=115 Identities=17% Similarity=0.167 Sum_probs=70.4
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-------eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHH--HH--HHH
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGA-------IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQRE--KL--MET 83 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~--~~--~~~ 83 (263)
+|.|+|++|.+|.+++..|+..+. .++++++++... .......|+.+..... .. ...
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~------------~a~g~~~Dl~d~~~~~~~~~~~~~~ 68 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK------------VLEGVVMELMDCAFPLLDGVVPTHD 68 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc------------ccceeEeehhcccchhcCceeccCC
Confidence 478999999999999999998654 499999965431 0122334444433100 00 001
Q ss_pred HHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC--CCceEEEEcccc
Q 024752 84 VSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA--GNGNIIFISSVA 152 (263)
Q Consensus 84 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~iv~vsS~~ 152 (263)
..+.+ ...|++|+.||.... +.+++.+.+..|+ .+++.+.+.+.+. ..+.+|.+|-..
T Consensus 69 ~~~~~-~~aDiVVitAG~~~~------~~~tr~~ll~~N~----~i~k~i~~~i~~~~~~~~iiivvsNPv 128 (324)
T TIGR01758 69 PAVAF-TDVDVAILVGAFPRK------EGMERRDLLSKNV----KIFKEQGRALDKLAKKDCKVLVVGNPA 128 (324)
T ss_pred hHHHh-CCCCEEEEcCCCCCC------CCCcHHHHHHHHH----HHHHHHHHHHHhhCCCCeEEEEeCCcH
Confidence 11222 568999999997532 1233566777776 5666666666765 357777777544
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >PRK14968 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0034 Score=49.37 Aligned_cols=121 Identities=19% Similarity=0.192 Sum_probs=73.5
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCc---eEEEeccCCCHHHHHHHHHHHHhh
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQ---VSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
.+++++|-.|++.|. ++..+++++.+|+.++++++..+...+.+...+.. +.++.+|+.+. ..
T Consensus 22 ~~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---------~~-- 87 (188)
T PRK14968 22 KKGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP---------FR-- 87 (188)
T ss_pred cCCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc---------cc--
Confidence 467889999988776 56666666899999999998877776666544322 77778886431 11
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHh---HHHHHHHHhHHHhhCCCceEEEEc
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFES---AYHLSQLAHPLLKSAGNGNIIFIS 149 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~---~~~~~~~~~~~~~~~~~~~iv~vs 149 (263)
..++|.++.|..+....+.... .+.+...+..+..+ .-.+++.+.+.|+. +|.++++.
T Consensus 88 -~~~~d~vi~n~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~Lk~--gG~~~~~~ 148 (188)
T PRK14968 88 -GDKFDVILFNPPYLPTEEEEEW-DDWLNYALSGGKDGREVIDRFLDEVGRYLKP--GGRILLLQ 148 (188)
T ss_pred -ccCceEEEECCCcCCCCchhhh-hhhhhhhhccCcChHHHHHHHHHHHHHhcCC--CeEEEEEE
Confidence 1368999999886554332111 11222222222222 22356666666654 56766654
|
|
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0062 Score=50.93 Aligned_cols=143 Identities=13% Similarity=0.126 Sum_probs=82.3
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchh-------------------HHHHHHHHHhcCCceEEEec-
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETE-------------------LNQRIQEWKSKGLQVSGSVC- 69 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~-------------------~~~~~~~~~~~~~~~~~~~~- 69 (263)
++++.|+|.|+ ||+|..+++.|++.|. ++.+++.+.-. .+...+.+.+....+.....
T Consensus 28 L~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~ 106 (268)
T PRK15116 28 FADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVD 106 (268)
T ss_pred hcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEe
Confidence 67888999976 5899999999999996 78888876422 12223333332222222111
Q ss_pred cCCCHHHHHHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEc
Q 024752 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFIS 149 (263)
Q Consensus 70 D~~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vs 149 (263)
+.-+++....++. .+.|++|.+.... ..-..+.+.+ ++. +-.+|..+
T Consensus 107 ~~i~~e~~~~ll~-------~~~D~VIdaiD~~---------------------~~k~~L~~~c----~~~-~ip~I~~g 153 (268)
T PRK15116 107 DFITPDNVAEYMS-------AGFSYVIDAIDSV---------------------RPKAALIAYC----RRN-KIPLVTTG 153 (268)
T ss_pred cccChhhHHHHhc-------CCCCEEEEcCCCH---------------------HHHHHHHHHH----HHc-CCCEEEEC
Confidence 2222333333321 3467777666621 1111222333 333 34566665
Q ss_pred cccccccCCCCcchhhHHHHHHHHHHHHHHHHcc-CCcE
Q 024752 150 SVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAK-DKIR 187 (263)
Q Consensus 150 S~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~-~gi~ 187 (263)
...+.........-..+|.-...|++.+++++.+ +||+
T Consensus 154 Gag~k~dp~~~~~~di~~t~~~pla~~~R~~lr~~~~~~ 192 (268)
T PRK15116 154 GAGGQIDPTQIQVVDLAKTIQDPLAAKLRERLKSDFGVV 192 (268)
T ss_pred CcccCCCCCeEEEEeeecccCChHHHHHHHHHHHhhCCC
Confidence 5554443333344567778888999999999997 6774
|
|
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.001 Score=56.33 Aligned_cols=80 Identities=21% Similarity=0.261 Sum_probs=56.8
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
++++|.++|.|+ ||.+++++..|++.|+ +|.++.|+.++.+++++++.... .+.. +...+++.. ..
T Consensus 122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~-~~~~----~~~~~~~~~-------~~ 188 (282)
T TIGR01809 122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVG-VITR----LEGDSGGLA-------IE 188 (282)
T ss_pred ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcC-ccee----ccchhhhhh-------cc
Confidence 578999999987 8889999999999998 69999999999988887764321 1111 111111111 11
Q ss_pred CCCccEEEeCCCCCC
Q 024752 89 DGKLNILINNAGTFI 103 (263)
Q Consensus 89 ~~~id~li~~ag~~~ 103 (263)
...|+|||+.....
T Consensus 189 -~~~DiVInaTp~g~ 202 (282)
T TIGR01809 189 -KAAEVLVSTVPADV 202 (282)
T ss_pred -cCCCEEEECCCCCC
Confidence 46899999988753
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0014 Score=55.49 Aligned_cols=80 Identities=13% Similarity=0.075 Sum_probs=57.5
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
.++++|+++|.|+ ||.|++++..|++.|+ +|.+++|+.++.+++++++......+..... +++.+.
T Consensus 123 ~~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~-----~~~~~~------- 189 (284)
T PRK12549 123 PDASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAG-----SDLAAA------- 189 (284)
T ss_pred cCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEec-----cchHhh-------
Confidence 4678899999997 6689999999999998 7999999999999988887643222222111 111111
Q ss_pred cCCCccEEEeCCCCC
Q 024752 88 FDGKLNILINNAGTF 102 (263)
Q Consensus 88 ~~~~id~li~~ag~~ 102 (263)
. ...|+|||+...+
T Consensus 190 ~-~~aDiVInaTp~G 203 (284)
T PRK12549 190 L-AAADGLVHATPTG 203 (284)
T ss_pred h-CCCCEEEECCcCC
Confidence 1 4579999995443
|
|
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0017 Score=56.21 Aligned_cols=80 Identities=18% Similarity=0.294 Sum_probs=54.0
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
.|++++|+|++|++|..+++.+...|++|+.++++.++.+.+.+.+ +... . .|-.+.++..+.+.+. .++.
T Consensus 151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l---Ga~~-v--i~~~~~~~~~~~i~~~---~~~g 221 (338)
T cd08295 151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL---GFDD-A--FNYKEEPDLDAALKRY---FPNG 221 (338)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCce-e--EEcCCcccHHHHHHHh---CCCC
Confidence 4899999999999999999988899999999999887766554323 2211 1 2222222333333222 2246
Q ss_pred ccEEEeCCC
Q 024752 92 LNILINNAG 100 (263)
Q Consensus 92 id~li~~ag 100 (263)
+|+++.+.|
T Consensus 222 vd~v~d~~g 230 (338)
T cd08295 222 IDIYFDNVG 230 (338)
T ss_pred cEEEEECCC
Confidence 999999887
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0099 Score=44.81 Aligned_cols=112 Identities=12% Similarity=0.077 Sum_probs=72.8
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchhHHHHHHHHHhc---C-CceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSK---G-LQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
+|.|.|++|.+|.+++..|...+. ++++++++++.++....+++.. . .+..... .+.++ +
T Consensus 2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~~-----------~ 67 (141)
T PF00056_consen 2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYEA-----------L 67 (141)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGGG-----------G
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---ccccc-----------c
Confidence 688999999999999999999976 6999999998888777777642 2 2222222 22111 1
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-CCceEEEEccc
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-GNGNIIFISSV 151 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~ 151 (263)
..-|++|..||..... ..+ -.+.++.|..- ++.+.+.+.+. ..+.++.++..
T Consensus 68 -~~aDivvitag~~~~~---g~s---R~~ll~~N~~i----~~~~~~~i~~~~p~~~vivvtNP 120 (141)
T PF00056_consen 68 -KDADIVVITAGVPRKP---GMS---RLDLLEANAKI----VKEIAKKIAKYAPDAIVIVVTNP 120 (141)
T ss_dssp -TTESEEEETTSTSSST---TSS---HHHHHHHHHHH----HHHHHHHHHHHSTTSEEEE-SSS
T ss_pred -ccccEEEEeccccccc---ccc---HHHHHHHhHhH----HHHHHHHHHHhCCccEEEEeCCc
Confidence 4689999999975321 123 44556666644 44444444443 45677776543
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0077 Score=49.31 Aligned_cols=146 Identities=16% Similarity=0.166 Sum_probs=84.4
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCch-------------------hHHHHHHHHHhcCC--ceEEEe
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNET-------------------ELNQRIQEWKSKGL--QVSGSV 68 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~-------------------~~~~~~~~~~~~~~--~~~~~~ 68 (263)
+++++|+|.|+ ||+|..+++.|++.|. +++++|.+.- +.+...+.+.+... ++..+.
T Consensus 9 L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~ 87 (231)
T cd00755 9 LRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE 87 (231)
T ss_pred HhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee
Confidence 56788999876 5899999999999998 7888887642 23333344443332 233333
Q ss_pred ccCCCHHHHHHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEE
Q 024752 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFI 148 (263)
Q Consensus 69 ~D~~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~v 148 (263)
..++ ++....++ ..++|++|.+... . ..-..+.+.+ ++. +-.+|..
T Consensus 88 ~~i~-~~~~~~l~-------~~~~D~VvdaiD~----------~-----------~~k~~L~~~c----~~~-~ip~I~s 133 (231)
T cd00755 88 EFLT-PDNSEDLL-------GGDPDFVVDAIDS----------I-----------RAKVALIAYC----RKR-KIPVISS 133 (231)
T ss_pred eecC-HhHHHHHh-------cCCCCEEEEcCCC----------H-----------HHHHHHHHHH----HHh-CCCEEEE
Confidence 3333 23333322 1357777777542 1 1112222333 232 3355555
Q ss_pred ccccccccCCCCcchhhHHHHHHHHHHHHHHHHccCCcE--EEEE
Q 024752 149 SSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR--VNTV 191 (263)
Q Consensus 149 sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~--v~~v 191 (263)
.+..+.........-..+|.-...+++.+++++.++|++ +.+|
T Consensus 134 ~g~g~~~dp~~i~i~di~~t~~~pla~~~R~~Lrk~~~~~~~~~v 178 (231)
T cd00755 134 MGAGGKLDPTRIRVADISKTSGDPLARKVRKRLRKRGIFFGVPVV 178 (231)
T ss_pred eCCcCCCCCCeEEEccEeccccCcHHHHHHHHHHHcCCCCCeEEE
Confidence 444443332223445566777788999999999998885 4444
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0019 Score=55.45 Aligned_cols=115 Identities=15% Similarity=0.062 Sum_probs=63.9
Q ss_pred CEEEEecCCCchHHHHHHHHHH-C--CCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 14 MTALVTGGTKGIGYAVVEELAA-F--GAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~-~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
++++|.||+|++|.+++..+.. . +..+.+++|++. .+...-++...+. ...+.. .+.+++.+.+ .
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~~~-~~~i~~--~~~~d~~~~l--------~ 68 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHIPT-AVKIKG--FSGEDPTPAL--------E 68 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcCCC-CceEEE--eCCCCHHHHc--------C
Confidence 5789999999999999998865 3 347888898754 2211112222111 111121 1111111111 3
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcc
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISS 150 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS 150 (263)
..|++|.++|...... ++-.+.+..|....-.+ .+.|.+....++|.+.|
T Consensus 69 ~~DiVIitaG~~~~~~------~~R~dll~~N~~i~~~i----i~~i~~~~~~~ivivvs 118 (312)
T PRK05086 69 GADVVLISAGVARKPG------MDRSDLFNVNAGIVKNL----VEKVAKTCPKACIGIIT 118 (312)
T ss_pred CCCEEEEcCCCCCCCC------CCHHHHHHHHHHHHHHH----HHHHHHhCCCeEEEEcc
Confidence 5899999999754321 12345567776554444 44456554445555554
|
|
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0017 Score=56.57 Aligned_cols=80 Identities=16% Similarity=0.291 Sum_probs=53.8
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
+|++++|+|++|++|..+++.+...|++|+.++++.++.+.+.+++ +.... .|-.+.++..+.+.+. .++.
T Consensus 158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l---Ga~~v---i~~~~~~~~~~~i~~~---~~~g 228 (348)
T PLN03154 158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFDEA---FNYKEEPDLDAALKRY---FPEG 228 (348)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc---CCCEE---EECCCcccHHHHHHHH---CCCC
Confidence 5899999999999999999988889999999988887765543333 32211 1222222233333222 2246
Q ss_pred ccEEEeCCC
Q 024752 92 LNILINNAG 100 (263)
Q Consensus 92 id~li~~ag 100 (263)
+|+++.+.|
T Consensus 229 vD~v~d~vG 237 (348)
T PLN03154 229 IDIYFDNVG 237 (348)
T ss_pred cEEEEECCC
Confidence 999999988
|
|
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0047 Score=53.13 Aligned_cols=79 Identities=16% Similarity=0.234 Sum_probs=53.6
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
+|++++|+|++|++|..+++.+...|++|+.+++++++.+.+ ++ .+.... .|-.+.+...+.+... .++.
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~---lGa~~v---i~~~~~~~~~~~~~~~---~~~g 207 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KK---LGFDVA---FNYKTVKSLEETLKKA---SPDG 207 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HH---cCCCEE---EeccccccHHHHHHHh---CCCC
Confidence 588999999999999999998888999999999987765544 33 233221 1222222333333332 2246
Q ss_pred ccEEEeCCC
Q 024752 92 LNILINNAG 100 (263)
Q Consensus 92 id~li~~ag 100 (263)
+|+++.+.|
T Consensus 208 vdvv~d~~G 216 (325)
T TIGR02825 208 YDCYFDNVG 216 (325)
T ss_pred eEEEEECCC
Confidence 999999887
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >COG2130 Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0016 Score=54.57 Aligned_cols=109 Identities=16% Similarity=0.175 Sum_probs=76.1
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
-.|++++|++|+|..|.-+.+.-.-.|++|+.+.-.+++..-+.+++. -.. -.|-..+ ++.+.+++..+.
T Consensus 149 k~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lG---fD~---~idyk~~----d~~~~L~~a~P~ 218 (340)
T COG2130 149 KAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELG---FDA---GIDYKAE----DFAQALKEACPK 218 (340)
T ss_pred CCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcC---Cce---eeecCcc----cHHHHHHHHCCC
Confidence 348999999999999988777666679999999999988776665542 111 1233332 333444444456
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI 157 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~ 157 (263)
.||+.+-|.|. .++.++++.|.. .+||+..+-++.+...
T Consensus 219 GIDvyfeNVGg--------------------------~v~DAv~~~ln~--~aRi~~CG~IS~YN~~ 257 (340)
T COG2130 219 GIDVYFENVGG--------------------------EVLDAVLPLLNL--FARIPVCGAISQYNAP 257 (340)
T ss_pred CeEEEEEcCCc--------------------------hHHHHHHHhhcc--ccceeeeeehhhcCCC
Confidence 79999999995 234566666655 6899999888777543
|
|
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0025 Score=53.91 Aligned_cols=83 Identities=13% Similarity=0.084 Sum_probs=57.5
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
.++++|+++|.|+ ||-+++++..|++.|+ ++.++.|+.++.+++++.+............+. .+.....
T Consensus 123 ~~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~~---~~~~~~~------ 192 (283)
T PRK14027 123 PNAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDA---RGIEDVI------ 192 (283)
T ss_pred cCcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecCH---hHHHHHH------
Confidence 3577899999998 7889999999999998 699999999999988877653211111111221 1111111
Q ss_pred cCCCccEEEeCCCCCC
Q 024752 88 FDGKLNILINNAGTFI 103 (263)
Q Consensus 88 ~~~~id~li~~ag~~~ 103 (263)
...|++||+...+-
T Consensus 193 --~~~divINaTp~Gm 206 (283)
T PRK14027 193 --AAADGVVNATPMGM 206 (283)
T ss_pred --hhcCEEEEcCCCCC
Confidence 35799999987653
|
|
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0031 Score=55.51 Aligned_cols=77 Identities=18% Similarity=0.154 Sum_probs=55.1
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
++++.++|.|+ |.+|+..++.+...|++|++++|++++++.+.... +.. +..+..+.+.+.+.+ .
T Consensus 165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~---g~~---v~~~~~~~~~l~~~l--------~ 229 (370)
T TIGR00518 165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF---GGR---IHTRYSNAYEIEDAV--------K 229 (370)
T ss_pred CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc---Cce---eEeccCCHHHHHHHH--------c
Confidence 46678999988 78999999999999999999999987766554332 111 223445555544443 3
Q ss_pred CccEEEeCCCCC
Q 024752 91 KLNILINNAGTF 102 (263)
Q Consensus 91 ~id~li~~ag~~ 102 (263)
..|++|+++++.
T Consensus 230 ~aDvVI~a~~~~ 241 (370)
T TIGR00518 230 RADLLIGAVLIP 241 (370)
T ss_pred cCCEEEEccccC
Confidence 579999998763
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00021 Score=46.83 Aligned_cols=39 Identities=26% Similarity=0.372 Sum_probs=24.5
Q ss_pred cCCCCC-CEEEEecCCCchHHH--HHHHHHHCCCeEEEeeCCc
Q 024752 8 RWSLKG-MTALVTGGTKGIGYA--VVEELAAFGAIVHTCSRNE 47 (263)
Q Consensus 8 ~~~~~~-k~vlVtGas~giG~~--~a~~l~~~g~~V~~~~r~~ 47 (263)
+-.++| |+|||+|+|+|.|++ ++..| ..|++.+.+....
T Consensus 33 ~~~~~GpK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fEk 74 (78)
T PF12242_consen 33 QGKINGPKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFEK 74 (78)
T ss_dssp C---TS-SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE---
T ss_pred cCCCCCCceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeecc
Confidence 344566 999999999999999 66666 6788887776543
|
|
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0015 Score=58.26 Aligned_cols=75 Identities=13% Similarity=0.262 Sum_probs=55.7
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
++++|+++|.|+ |++|+.+++.|++.|+ +++++.|+.++.+++..++.. . ..+ ..++....+
T Consensus 178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~--~--~~~-----~~~~l~~~l------- 240 (414)
T PRK13940 178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN--A--SAH-----YLSELPQLI------- 240 (414)
T ss_pred CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC--C--eEe-----cHHHHHHHh-------
Confidence 589999999999 9999999999999996 799999999888887766521 1 111 112222222
Q ss_pred CCCccEEEeCCCCC
Q 024752 89 DGKLNILINNAGTF 102 (263)
Q Consensus 89 ~~~id~li~~ag~~ 102 (263)
...|++|++.+..
T Consensus 241 -~~aDiVI~aT~a~ 253 (414)
T PRK13940 241 -KKADIIIAAVNVL 253 (414)
T ss_pred -ccCCEEEECcCCC
Confidence 4679999998854
|
|
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.019 Score=48.99 Aligned_cols=43 Identities=28% Similarity=0.380 Sum_probs=37.8
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHH
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN 51 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~ 51 (263)
..++++++++|.|. |++|+.++..|...|++|.+++|+++..+
T Consensus 147 ~~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~ 189 (296)
T PRK08306 147 PITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLA 189 (296)
T ss_pred CCCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 45788999999997 67999999999999999999999976543
|
|
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.00097 Score=53.43 Aligned_cols=48 Identities=29% Similarity=0.327 Sum_probs=42.4
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHH
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE 56 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~ 56 (263)
..+++||+++|+|.+ .+|+.+++.|.+.|++|++++++++..++..++
T Consensus 23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~ 70 (200)
T cd01075 23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAEL 70 (200)
T ss_pred CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence 578999999999996 899999999999999999999998777666544
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0017 Score=58.44 Aligned_cols=82 Identities=22% Similarity=0.191 Sum_probs=57.5
Q ss_pred CCCCCCEEEEecCC----------------CchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCC
Q 024752 9 WSLKGMTALVTGGT----------------KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLK 72 (263)
Q Consensus 9 ~~~~~k~vlVtGas----------------~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~ 72 (263)
-+|+||+||||+|. |-.|.+||+.+..+|++|.++.-...- .....+..+. +.
T Consensus 252 ~~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~~---------~~p~~v~~i~--V~ 320 (475)
T PRK13982 252 KPLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVDL---------ADPQGVKVIH--VE 320 (475)
T ss_pred cccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcCC---------CCCCCceEEE--ec
Confidence 36999999999986 678999999999999999998744320 0112233333 33
Q ss_pred CHHHHHHHHHHHHhhcCCCccEEEeCCCCCCCCC
Q 024752 73 IRAQREKLMETVSSQFDGKLNILINNAGTFIPKE 106 (263)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~ 106 (263)
+..+..+.+.+.+ +.|++|++|++....+
T Consensus 321 ---ta~eM~~av~~~~--~~Di~I~aAAVaDyrp 349 (475)
T PRK13982 321 ---SARQMLAAVEAAL--PADIAIFAAAVADWRV 349 (475)
T ss_pred ---CHHHHHHHHHhhC--CCCEEEEeccccceee
Confidence 3455555555555 3699999999986654
|
|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0021 Score=54.54 Aligned_cols=45 Identities=22% Similarity=0.437 Sum_probs=39.3
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHH
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQ 52 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~ 52 (263)
..++++||+++|.|. |++|+++++.|...|++|.+.+|+++..+.
T Consensus 145 ~~~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~ 189 (287)
T TIGR02853 145 TDFTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR 189 (287)
T ss_pred cCCCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 346899999999999 669999999999999999999999875443
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0071 Score=50.02 Aligned_cols=79 Identities=28% Similarity=0.332 Sum_probs=52.8
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
.++++++|+|+++ +|+.+++.+...|.+|+.++++++..+.. ++. +... ..|..+.+....+. ...++
T Consensus 133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~---~~~~~~~~~~~~~~----~~~~~ 200 (271)
T cd05188 133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KEL---GADH---VIDYKEEDLEEELR----LTGGG 200 (271)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHh---CCce---eccCCcCCHHHHHH----HhcCC
Confidence 4688999999999 99999999999999999999987665443 222 2211 12333333333322 11125
Q ss_pred CccEEEeCCCC
Q 024752 91 KLNILINNAGT 101 (263)
Q Consensus 91 ~id~li~~ag~ 101 (263)
.+|+++++++.
T Consensus 201 ~~d~vi~~~~~ 211 (271)
T cd05188 201 GADVVIDAVGG 211 (271)
T ss_pred CCCEEEECCCC
Confidence 79999999884
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0076 Score=51.64 Aligned_cols=113 Identities=14% Similarity=0.130 Sum_probs=73.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC--CeEEEeeCCchhHHHHHHHHHhc----CCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETELNQRIQEWKSK----GLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
+++.|.|+ |++|++++..|+..| ..+++++|+++..+....++.+. +...... . .+.++ +
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~--~~~~~-------l--- 66 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-A--GDYSD-------C--- 66 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-c--CCHHH-------h---
Confidence 36788896 899999999999999 47999999999888887777542 1222221 1 12211 1
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-CCceEEEEcccc
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-GNGNIIFISSVA 152 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~ 152 (263)
..-|++|+++|.... + ..+. .+.++.|. .+++...+.+++. ..+.++++|-..
T Consensus 67 --~~aDIVIitag~~~~-~--g~~R---~dll~~N~----~i~~~~~~~i~~~~~~~~vivvsNP~ 120 (306)
T cd05291 67 --KDADIVVITAGAPQK-P--GETR---LDLLEKNA----KIMKSIVPKIKASGFDGIFLVASNPV 120 (306)
T ss_pred --CCCCEEEEccCCCCC-C--CCCH---HHHHHHHH----HHHHHHHHHHHHhCCCeEEEEecChH
Confidence 467999999997432 1 1232 34556665 4455555555554 356777777544
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0077 Score=51.78 Aligned_cols=117 Identities=9% Similarity=0.043 Sum_probs=77.1
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchhHHHHHHHHHhcC---CceEEEeccCCCHHHHHHHHHHH
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKG---LQVSGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~ 84 (263)
+-+++++.|+|+ |.+|.+++..++..|. .+.+++++++.++....++...- .++.. .. .+.++
T Consensus 3 ~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i-~~--~~~~~-------- 70 (315)
T PRK00066 3 KKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKI-YA--GDYSD-------- 70 (315)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEE-Ee--CCHHH--------
Confidence 456789999998 9999999999999987 79999999998887777776431 12221 11 11111
Q ss_pred HhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-CCceEEEEcccc
Q 024752 85 SSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-GNGNIIFISSVA 152 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~ 152 (263)
+ ..-|++|..||.... + ..+. .+.++.|. .+++.+.+.+.+. ..+.+++++-..
T Consensus 71 ---~-~~adivIitag~~~k-~--g~~R---~dll~~N~----~i~~~i~~~i~~~~~~~~vivvsNP~ 125 (315)
T PRK00066 71 ---C-KDADLVVITAGAPQK-P--GETR---LDLVEKNL----KIFKSIVGEVMASGFDGIFLVASNPV 125 (315)
T ss_pred ---h-CCCCEEEEecCCCCC-C--CCCH---HHHHHHHH----HHHHHHHHHHHHhCCCeEEEEccCcH
Confidence 1 467999999997432 1 1233 34566665 4445545555553 457777777544
|
|
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0071 Score=52.05 Aligned_cols=76 Identities=24% Similarity=0.270 Sum_probs=53.7
Q ss_pred CCCC-CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 9 WSLK-GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 9 ~~~~-~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
++.+ |++|+|+|++ |+|...++.....|++|++++|++++++...+. +.... .+.++++..+.+-
T Consensus 162 ~~~~pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~l----GAd~~---i~~~~~~~~~~~~------ 227 (339)
T COG1064 162 ANVKPGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKKL----GADHV---INSSDSDALEAVK------ 227 (339)
T ss_pred cCCCCCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHh----CCcEE---EEcCCchhhHHhH------
Confidence 4444 8999999999 999988888778999999999999987655432 33322 2333443333332
Q ss_pred cCCCccEEEeCCC
Q 024752 88 FDGKLNILINNAG 100 (263)
Q Consensus 88 ~~~~id~li~~ag 100 (263)
+.+|+++..++
T Consensus 228 --~~~d~ii~tv~ 238 (339)
T COG1064 228 --EIADAIIDTVG 238 (339)
T ss_pred --hhCcEEEECCC
Confidence 23799999988
|
|
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0014 Score=55.49 Aligned_cols=77 Identities=18% Similarity=0.208 Sum_probs=60.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
..++|.||+|..|.-+|++|+++|.+..+.+|+..+++.+..++. ..+....++ ++..+++.+ ...+
T Consensus 7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG---~~~~~~p~~--~p~~~~~~~--------~~~~ 73 (382)
T COG3268 7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLG---PEAAVFPLG--VPAALEAMA--------SRTQ 73 (382)
T ss_pred eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcC---ccccccCCC--CHHHHHHHH--------hcce
Confidence 568999999999999999999999999999999999998887763 233333333 355555554 4679
Q ss_pred EEEeCCCCCC
Q 024752 94 ILINNAGTFI 103 (263)
Q Consensus 94 ~li~~ag~~~ 103 (263)
+|+||+|...
T Consensus 74 VVlncvGPyt 83 (382)
T COG3268 74 VVLNCVGPYT 83 (382)
T ss_pred EEEecccccc
Confidence 9999999663
|
|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0056 Score=53.12 Aligned_cols=81 Identities=16% Similarity=0.295 Sum_probs=57.2
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCc---------------------hhHHHHHHHHHhc--CCceE
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNE---------------------TELNQRIQEWKSK--GLQVS 65 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~---------------------~~~~~~~~~~~~~--~~~~~ 65 (263)
.+++++|+|.|+ ||+|.++++.|+..|. ++.++|++. .+.+...+.+.+. ..++.
T Consensus 21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~ 99 (338)
T PRK12475 21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIV 99 (338)
T ss_pred hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEE
Confidence 478899999997 7799999999999998 799999874 2344445555543 34456
Q ss_pred EEeccCCCHHHHHHHHHHHHhhcCCCccEEEeCCC
Q 024752 66 GSVCDLKIRAQREKLMETVSSQFDGKLNILINNAG 100 (263)
Q Consensus 66 ~~~~D~~~~~~~~~~~~~~~~~~~~~id~li~~ag 100 (263)
.+..|++ .+.+++++ ...|++|.+..
T Consensus 100 ~~~~~~~-~~~~~~~~--------~~~DlVid~~D 125 (338)
T PRK12475 100 PVVTDVT-VEELEELV--------KEVDLIIDATD 125 (338)
T ss_pred EEeccCC-HHHHHHHh--------cCCCEEEEcCC
Confidence 6666775 33444432 45788888765
|
|
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0045 Score=52.50 Aligned_cols=85 Identities=19% Similarity=0.161 Sum_probs=55.3
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCc---hhHHHHHHHHHhcCC-ceEEEeccCCCHHHHHHHH
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNE---TELNQRIQEWKSKGL-QVSGSVCDLKIRAQREKLM 81 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~---~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~ 81 (263)
...++++|+++|.|+ ||-+++++..|+..|+ +|.++.|++ ++.+++++++..... .+.. .++.+.+.+.
T Consensus 118 ~~~~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~--~~~~~~~~l~--- 191 (288)
T PRK12749 118 SGFDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTV--TDLADQQAFA--- 191 (288)
T ss_pred cCCCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEE--echhhhhhhh---
Confidence 456789999999997 5559999999999997 799999995 466667666543211 1111 1221111111
Q ss_pred HHHHhhcCCCccEEEeCCCCC
Q 024752 82 ETVSSQFDGKLNILINNAGTF 102 (263)
Q Consensus 82 ~~~~~~~~~~id~li~~ag~~ 102 (263)
+.. .+.|+|||+....
T Consensus 192 ----~~~-~~aDivINaTp~G 207 (288)
T PRK12749 192 ----EAL-ASADILTNGTKVG 207 (288)
T ss_pred ----hhc-ccCCEEEECCCCC
Confidence 111 4689999987654
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0017 Score=54.05 Aligned_cols=75 Identities=16% Similarity=0.159 Sum_probs=55.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
+++||+|||+- |+.+++.|.++|++|+.+.++....+.... .+ ...+..+.-+.+++.+++.+ .++|
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~----~g--~~~v~~g~l~~~~l~~~l~~------~~i~ 67 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI----HQ--ALTVHTGALDPQELREFLKR------HSID 67 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc----cC--CceEEECCCCHHHHHHHHHh------cCCC
Confidence 47999999998 999999999999999999998875443321 11 22344666677776666643 4799
Q ss_pred EEEeCCCC
Q 024752 94 ILINNAGT 101 (263)
Q Consensus 94 ~li~~ag~ 101 (263)
+||+.+..
T Consensus 68 ~VIDAtHP 75 (256)
T TIGR00715 68 ILVDATHP 75 (256)
T ss_pred EEEEcCCH
Confidence 99998863
|
This enzyme was found to be a monomer by gel filtration. |
| >PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0095 Score=53.81 Aligned_cols=80 Identities=21% Similarity=0.149 Sum_probs=52.5
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
|++++|+++|+|.+ ++|.++|+.|+++|+.|.+.+.+.... ...+++.....+.+...... .. ..
T Consensus 1 ~~~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~~--~~~~l~~~~~gi~~~~g~~~-~~----~~------- 65 (445)
T PRK04308 1 MTFQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKPE--RVAQIGKMFDGLVFYTGRLK-DA----LD------- 65 (445)
T ss_pred CCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCch--hHHHHhhccCCcEEEeCCCC-HH----HH-------
Confidence 45789999999986 899999999999999999998765431 12223321112333222211 11 11
Q ss_pred CCCccEEEeCCCCCCC
Q 024752 89 DGKLNILINNAGTFIP 104 (263)
Q Consensus 89 ~~~id~li~~ag~~~~ 104 (263)
...|.||...|+...
T Consensus 66 -~~~d~vv~spgi~~~ 80 (445)
T PRK04308 66 -NGFDILALSPGISER 80 (445)
T ss_pred -hCCCEEEECCCCCCC
Confidence 357999999998643
|
|
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0038 Score=52.57 Aligned_cols=83 Identities=20% Similarity=0.222 Sum_probs=60.4
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
.++.+++.++|.|++ |-+++++..|++.|+ ++.++.|+.++++++++.+...+..+.. .+..+.+..
T Consensus 121 ~~~~~~~~vlilGAG-GAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~--~~~~~~~~~--------- 188 (283)
T COG0169 121 PVDVTGKRVLILGAG-GAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEA--AALADLEGL--------- 188 (283)
T ss_pred CcccCCCEEEEECCc-HHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccc--ccccccccc---------
Confidence 377889999999975 569999999999996 7999999999999999888765432111 122111110
Q ss_pred hcCCCccEEEeCCCCCCCC
Q 024752 87 QFDGKLNILINNAGTFIPK 105 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~ 105 (263)
...|++||+...+-.+
T Consensus 189 ---~~~dliINaTp~Gm~~ 204 (283)
T COG0169 189 ---EEADLLINATPVGMAG 204 (283)
T ss_pred ---cccCEEEECCCCCCCC
Confidence 1369999998876544
|
|
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0043 Score=53.73 Aligned_cols=78 Identities=14% Similarity=0.204 Sum_probs=52.6
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
+++++|+|++|++|..+++.....|+ +|+.+++++++.+.+.+++ +.... .|..+ ++..+.+.++ .++.
T Consensus 155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l---Ga~~v---i~~~~-~~~~~~i~~~---~~~g 224 (345)
T cd08293 155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL---GFDAA---INYKT-DNVAERLREL---CPEG 224 (345)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc---CCcEE---EECCC-CCHHHHHHHH---CCCC
Confidence 38999999999999999988888899 7999999887766555433 32221 12222 1222222222 2246
Q ss_pred ccEEEeCCC
Q 024752 92 LNILINNAG 100 (263)
Q Consensus 92 id~li~~ag 100 (263)
+|+++.+.|
T Consensus 225 vd~vid~~g 233 (345)
T cd08293 225 VDVYFDNVG 233 (345)
T ss_pred ceEEEECCC
Confidence 999999887
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0052 Score=52.11 Aligned_cols=80 Identities=23% Similarity=0.413 Sum_probs=54.6
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
++++++|+|+++++|+.+++.+...|++|++++++.+..+.+ +++ +.. ...+..+.+....+.+ ... ++.
T Consensus 139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~---g~~---~~~~~~~~~~~~~~~~-~~~--~~~ 208 (323)
T cd05276 139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL---GAD---VAINYRTEDFAEEVKE-ATG--GRG 208 (323)
T ss_pred CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc---CCC---EEEeCCchhHHHHHHH-HhC--CCC
Confidence 578999999999999999999999999999999987765544 322 221 1233333333333222 211 246
Q ss_pred ccEEEeCCCC
Q 024752 92 LNILINNAGT 101 (263)
Q Consensus 92 id~li~~ag~ 101 (263)
+|.+++++|.
T Consensus 209 ~d~vi~~~g~ 218 (323)
T cd05276 209 VDVILDMVGG 218 (323)
T ss_pred eEEEEECCch
Confidence 9999999983
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding |
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0024 Score=49.64 Aligned_cols=40 Identities=23% Similarity=0.333 Sum_probs=36.3
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCch
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET 48 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~ 48 (263)
.+++||+++|.|++.-+|..+++.|.++|++|.++.|+.+
T Consensus 40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~ 79 (168)
T cd01080 40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTK 79 (168)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCch
Confidence 4799999999999777899999999999999999998753
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0075 Score=52.50 Aligned_cols=81 Identities=23% Similarity=0.373 Sum_probs=53.6
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
-+|+++||.||+||+|...++.....|+..+++.++.+..+ +.+++ |..- ..|-.+++ ..+++++..++
T Consensus 156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~-l~k~l---GAd~---vvdy~~~~----~~e~~kk~~~~ 224 (347)
T KOG1198|consen 156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLE-LVKKL---GADE---VVDYKDEN----VVELIKKYTGK 224 (347)
T ss_pred CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHH-HHHHc---CCcE---eecCCCHH----HHHHHHhhcCC
Confidence 35889999999999999999999999955555555554433 33333 3322 24666633 33333333236
Q ss_pred CccEEEeCCCCC
Q 024752 91 KLNILINNAGTF 102 (263)
Q Consensus 91 ~id~li~~ag~~ 102 (263)
++|+|+.|.|..
T Consensus 225 ~~DvVlD~vg~~ 236 (347)
T KOG1198|consen 225 GVDVVLDCVGGS 236 (347)
T ss_pred CccEEEECCCCC
Confidence 899999999964
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.011 Score=47.35 Aligned_cols=36 Identities=22% Similarity=0.333 Sum_probs=32.5
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRN 46 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~ 46 (263)
.+++++|+|.| .||+|..+++.|+..|. ++.++|.+
T Consensus 18 kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 18 RLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred HhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 47889999998 57999999999999998 79999987
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0087 Score=44.45 Aligned_cols=79 Identities=15% Similarity=0.125 Sum_probs=55.4
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCC-----------------
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKI----------------- 73 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~----------------- 73 (263)
.+++++++.|.+ .|.++|..|++.|++|++++.++...+...+. .+.++..|+.+
T Consensus 15 ~~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~------~~~~v~dDlf~p~~~~y~~a~liysirp 86 (134)
T PRK04148 15 GKNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL------GLNAFVDDLFNPNLEIYKNAKLIYSIRP 86 (134)
T ss_pred ccCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh------CCeEEECcCCCCCHHHHhcCCEEEEeCC
Confidence 456889999998 78889999999999999999999876555332 24566777776
Q ss_pred HHHHHHHHHHHHhhcCCCccEEEeCC
Q 024752 74 RAQREKLMETVSSQFDGKLNILINNA 99 (263)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~id~li~~a 99 (263)
+.++...+-++.++. ..|.+|---
T Consensus 87 p~el~~~~~~la~~~--~~~~~i~~l 110 (134)
T PRK04148 87 PRDLQPFILELAKKI--NVPLIIKPL 110 (134)
T ss_pred CHHHHHHHHHHHHHc--CCCEEEEcC
Confidence 334455555555553 455555443
|
|
| >cd05288 PGDH Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.01 Score=50.90 Aligned_cols=79 Identities=18% Similarity=0.284 Sum_probs=52.8
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
++++++|.|+++++|.++++.+.+.|++|+.++++.++.+...+.+ +.. .. .|..+.+..+. +.+..++.
T Consensus 145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~---g~~-~~--~~~~~~~~~~~----v~~~~~~~ 214 (329)
T cd05288 145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEEL---GFD-AA--INYKTPDLAEA----LKEAAPDG 214 (329)
T ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhc---CCc-eE--EecCChhHHHH----HHHhccCC
Confidence 5789999999999999999999999999999998887655443322 221 11 12222222222 22222246
Q ss_pred ccEEEeCCC
Q 024752 92 LNILINNAG 100 (263)
Q Consensus 92 id~li~~ag 100 (263)
+|+++.++|
T Consensus 215 ~d~vi~~~g 223 (329)
T cd05288 215 IDVYFDNVG 223 (329)
T ss_pred ceEEEEcch
Confidence 999999887
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino |
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0071 Score=51.85 Aligned_cols=75 Identities=29% Similarity=0.421 Sum_probs=51.4
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
.+++++|+|+++++|+++++.+...|++|+.+.++.+..+.+ . ..+.. .. .+. ++ ..+.+.+ . ..
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~-~---~~~~~-~~--~~~---~~---~~~~~~~-~-~~ 226 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL-K---ELGAD-YV--IDG---SK---FSEDVKK-L-GG 226 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-H---HcCCc-EE--Eec---HH---HHHHHHh-c-cC
Confidence 478999999999999999999999999999999887665443 2 22221 11 121 11 2222222 2 36
Q ss_pred ccEEEeCCCC
Q 024752 92 LNILINNAGT 101 (263)
Q Consensus 92 id~li~~ag~ 101 (263)
+|++++++|.
T Consensus 227 ~d~v~~~~g~ 236 (332)
T cd08259 227 ADVVIELVGS 236 (332)
T ss_pred CCEEEECCCh
Confidence 9999999874
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.043 Score=43.00 Aligned_cols=94 Identities=21% Similarity=0.135 Sum_probs=69.7
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
.-+++||+|+=.||+.|+ ++...+-.|+ +|+.++.+++..+-..+...+...++.++.+|+++.
T Consensus 41 ~g~l~g~~V~DlG~GTG~---La~ga~~lGa~~V~~vdiD~~a~ei~r~N~~~l~g~v~f~~~dv~~~------------ 105 (198)
T COG2263 41 RGDLEGKTVLDLGAGTGI---LAIGAALLGASRVLAVDIDPEALEIARANAEELLGDVEFVVADVSDF------------ 105 (198)
T ss_pred cCCcCCCEEEEcCCCcCH---HHHHHHhcCCcEEEEEecCHHHHHHHHHHHHhhCCceEEEEcchhhc------------
Confidence 457999999999998775 3333445675 799999999999988888877778899999998753
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHH
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMT 120 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~ 120 (263)
.+++|.+|-|...+... ...|..-+++.++
T Consensus 106 --~~~~dtvimNPPFG~~~--rhaDr~Fl~~Ale 135 (198)
T COG2263 106 --RGKFDTVIMNPPFGSQR--RHADRPFLLKALE 135 (198)
T ss_pred --CCccceEEECCCCcccc--ccCCHHHHHHHHH
Confidence 36899999998776552 2235554444433
|
|
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0048 Score=50.38 Aligned_cols=76 Identities=18% Similarity=0.254 Sum_probs=58.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
|.++|.|++ -+|+.+|+.|.++|++|++++++++..++..++ ...++.+.+|-++++.++++= -...|
T Consensus 1 m~iiIiG~G-~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~----~~~~~~v~gd~t~~~~L~~ag-------i~~aD 68 (225)
T COG0569 1 MKIIIIGAG-RVGRSVARELSEEGHNVVLIDRDEERVEEFLAD----ELDTHVVIGDATDEDVLEEAG-------IDDAD 68 (225)
T ss_pred CEEEEECCc-HHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh----hcceEEEEecCCCHHHHHhcC-------CCcCC
Confidence 356666665 569999999999999999999999987775442 134778889999988877762 14678
Q ss_pred EEEeCCCC
Q 024752 94 ILINNAGT 101 (263)
Q Consensus 94 ~li~~ag~ 101 (263)
+++...|.
T Consensus 69 ~vva~t~~ 76 (225)
T COG0569 69 AVVAATGN 76 (225)
T ss_pred EEEEeeCC
Confidence 88877764
|
|
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.014 Score=50.77 Aligned_cols=77 Identities=18% Similarity=0.299 Sum_probs=51.6
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
.+|++|+|+|+ |++|...++.+...|+ +|+++++++++++.. .++ |.... .|..++ ++.+ +.+..
T Consensus 168 ~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a-~~l---Ga~~v---i~~~~~-~~~~----~~~~~- 233 (343)
T PRK09880 168 LQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA-REM---GADKL---VNPQND-DLDH----YKAEK- 233 (343)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH-HHc---CCcEE---ecCCcc-cHHH----HhccC-
Confidence 36899999986 8999999998888999 688899988776533 332 33221 233322 2222 22222
Q ss_pred CCccEEEeCCCC
Q 024752 90 GKLNILINNAGT 101 (263)
Q Consensus 90 ~~id~li~~ag~ 101 (263)
+.+|++|.++|.
T Consensus 234 g~~D~vid~~G~ 245 (343)
T PRK09880 234 GYFDVSFEVSGH 245 (343)
T ss_pred CCCCEEEECCCC
Confidence 469999999983
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0071 Score=54.25 Aligned_cols=47 Identities=26% Similarity=0.386 Sum_probs=41.2
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHH
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEW 57 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~ 57 (263)
++++++++|.|+ |.+|+.+++.|...|+ +|++++|+.++.+++++++
T Consensus 179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~ 226 (423)
T PRK00045 179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF 226 (423)
T ss_pred CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc
Confidence 578999999987 9999999999999998 7999999998877776653
|
|
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.029 Score=51.23 Aligned_cols=112 Identities=17% Similarity=0.138 Sum_probs=69.2
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCH-------------HHH
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR-------------AQR 77 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-------------~~~ 77 (263)
..+.+|+|.|+ |.+|+..+..+...|++|+++++++++++.... .|.+. +..|..+. +..
T Consensus 163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes----lGA~~--v~i~~~e~~~~~~gya~~~s~~~~ 235 (509)
T PRK09424 163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES----MGAEF--LELDFEEEGGSGDGYAKVMSEEFI 235 (509)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCeE--EEeccccccccccchhhhcchhHH
Confidence 45889999987 678999999999999999999999987664432 34432 22232221 111
Q ss_pred HHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccc
Q 024752 78 EKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSV 151 (263)
Q Consensus 78 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~ 151 (263)
++..+.+.+.. +..|++|.++|+...+. +..+.+..+..|++ ++.|+.++..
T Consensus 236 ~~~~~~~~~~~-~gaDVVIetag~pg~~a-------------------P~lit~~~v~~mkp--GgvIVdvg~~ 287 (509)
T PRK09424 236 KAEMALFAEQA-KEVDIIITTALIPGKPA-------------------PKLITAEMVASMKP--GSVIVDLAAE 287 (509)
T ss_pred HHHHHHHHhcc-CCCCEEEECCCCCcccC-------------------cchHHHHHHHhcCC--CCEEEEEccC
Confidence 12122222222 46899999999754321 11223555555554 6788888763
|
|
| >PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.003 Score=57.45 Aligned_cols=50 Identities=18% Similarity=0.232 Sum_probs=43.1
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHH
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEW 57 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~ 57 (263)
...++++|+++|+|+ ||+|++++..|++.|++|++.+|+.++.+++.+++
T Consensus 326 ~~~~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~ 375 (477)
T PRK09310 326 KNIPLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRC 375 (477)
T ss_pred cCCCcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence 446788999999996 79999999999999999999999988877666543
|
|
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.01 Score=50.95 Aligned_cols=78 Identities=18% Similarity=0.278 Sum_probs=52.4
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
+|++++|+|+++++|..+++.....|++|+.+++++++.+.+.+ .+..-. .|-.++ +..+.+.+ ..++.
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~----~Ga~~v---i~~~~~-~~~~~v~~---~~~~g 211 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE----LGFDAV---FNYKTV-SLEEALKE---AAPDG 211 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCCCEE---EeCCCc-cHHHHHHH---HCCCC
Confidence 58999999999999999999888999999999988876554432 233211 232222 22222222 22246
Q ss_pred ccEEEeCCC
Q 024752 92 LNILINNAG 100 (263)
Q Consensus 92 id~li~~ag 100 (263)
+|+++.+.|
T Consensus 212 vd~vld~~g 220 (329)
T cd08294 212 IDCYFDNVG 220 (329)
T ss_pred cEEEEECCC
Confidence 999999887
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0042 Score=52.44 Aligned_cols=42 Identities=24% Similarity=0.294 Sum_probs=37.5
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE 47 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~ 47 (263)
....+++||.++|.|+++-.|+.++..|.++|++|.++.|..
T Consensus 152 ~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t 193 (283)
T PRK14192 152 AYNIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT 193 (283)
T ss_pred HcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 456789999999999999999999999999999999888743
|
|
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.02 Score=48.50 Aligned_cols=82 Identities=21% Similarity=0.242 Sum_probs=55.2
Q ss_pred ccccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCC-CHHHHHHHHHH
Q 024752 5 REQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLK-IRAQREKLMET 83 (263)
Q Consensus 5 ~~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~ 83 (263)
++..+. .||++-|+|+.| +|.--++--...|.+|+++++...+.++..+.+ |... ..|.+ +++.++++.+.
T Consensus 175 k~~g~~-pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~L---GAd~---fv~~~~d~d~~~~~~~~ 246 (360)
T KOG0023|consen 175 KRSGLG-PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSL---GADV---FVDSTEDPDIMKAIMKT 246 (360)
T ss_pred HHcCCC-CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhc---Ccce---eEEecCCHHHHHHHHHh
Confidence 344555 799999999998 886555444466999999999988777777665 3332 24666 56555555543
Q ss_pred HHhhcCCCccEEEeC
Q 024752 84 VSSQFDGKLNILINN 98 (263)
Q Consensus 84 ~~~~~~~~id~li~~ 98 (263)
. ++-+|.+++.
T Consensus 247 ~----dg~~~~v~~~ 257 (360)
T KOG0023|consen 247 T----DGGIDTVSNL 257 (360)
T ss_pred h----cCcceeeeec
Confidence 3 3556666554
|
|
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0093 Score=53.37 Aligned_cols=47 Identities=28% Similarity=0.345 Sum_probs=40.9
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCC-CeEEEeeCCchhHHHHHHHH
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEW 57 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g-~~V~~~~r~~~~~~~~~~~~ 57 (263)
++++++++|.|+ |.+|+.+++.|...| .+|++++|+.++.++.++++
T Consensus 177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~ 224 (417)
T TIGR01035 177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL 224 (417)
T ss_pred CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence 588999999997 999999999999999 68999999988777666543
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.021 Score=49.67 Aligned_cols=37 Identities=27% Similarity=0.360 Sum_probs=33.6
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCc
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNE 47 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~ 47 (263)
.++.++|+|.|+ ||+|..+++.|+..|. ++.+++++.
T Consensus 21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~ 58 (339)
T PRK07688 21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDY 58 (339)
T ss_pred HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence 477899999998 8999999999999999 899999874
|
|
| >KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.02 Score=48.03 Aligned_cols=108 Identities=14% Similarity=0.205 Sum_probs=74.6
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
-+|++++|.||+|..|+-+-+--.-.|+.|+..+-+.++..-+..++. ... ..+-.++.++.+++.++ +..
T Consensus 152 k~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G---~d~---afNYK~e~~~~~aL~r~---~P~ 222 (343)
T KOG1196|consen 152 KKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFG---FDD---AFNYKEESDLSAALKRC---FPE 222 (343)
T ss_pred CCCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccC---Ccc---ceeccCccCHHHHHHHh---CCC
Confidence 468999999999999986665555569999999988887766655432 111 12333444566666554 345
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccc
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVI 155 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~ 155 (263)
.||+.+-|.|. .++.+.+..|+. .|||+..+-++.+.
T Consensus 223 GIDiYfeNVGG--------------------------~~lDavl~nM~~--~gri~~CG~ISqYN 259 (343)
T KOG1196|consen 223 GIDIYFENVGG--------------------------KMLDAVLLNMNL--HGRIAVCGMISQYN 259 (343)
T ss_pred cceEEEeccCc--------------------------HHHHHHHHhhhh--ccceEeeeeehhcc
Confidence 69999999995 344566666666 58999988666543
|
|
| >cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.006 Score=45.87 Aligned_cols=44 Identities=25% Similarity=0.321 Sum_probs=39.4
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchh
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE 49 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~ 49 (263)
....+++||.++|.|.+.-.|+.++..|.++|++|..+.++...
T Consensus 21 ~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~ 64 (140)
T cd05212 21 KEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQ 64 (140)
T ss_pred HcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcC
Confidence 45678999999999999999999999999999999998876543
|
NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional |
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.015 Score=51.27 Aligned_cols=81 Identities=19% Similarity=0.278 Sum_probs=53.1
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCC-------------------chhHHHHHHHHHhcCC--ceEEE
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRN-------------------ETELNQRIQEWKSKGL--QVSGS 67 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~-------------------~~~~~~~~~~~~~~~~--~~~~~ 67 (263)
.+++++|+|.|+ ||+|..+++.|+..|. ++.+++++ ..+.+.+.+.+.+... ++..+
T Consensus 132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~ 210 (376)
T PRK08762 132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV 210 (376)
T ss_pred HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence 367888999966 7899999999999999 79999987 3455555555554333 23333
Q ss_pred eccCCCHHHHHHHHHHHHhhcCCCccEEEeCCC
Q 024752 68 VCDLKIRAQREKLMETVSSQFDGKLNILINNAG 100 (263)
Q Consensus 68 ~~D~~~~~~~~~~~~~~~~~~~~~id~li~~ag 100 (263)
...++. +.+..++ ...|+||++..
T Consensus 211 ~~~~~~-~~~~~~~--------~~~D~Vv~~~d 234 (376)
T PRK08762 211 QERVTS-DNVEALL--------QDVDVVVDGAD 234 (376)
T ss_pred eccCCh-HHHHHHH--------hCCCEEEECCC
Confidence 333332 2222222 35688887776
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.011 Score=54.05 Aligned_cols=47 Identities=23% Similarity=0.330 Sum_probs=42.2
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHH
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEW 57 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~ 57 (263)
++.+++++|.|+ |.+|+.+++.|...|+ +|+++.|+.++.+.+..++
T Consensus 263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~ 310 (519)
T PLN00203 263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF 310 (519)
T ss_pred CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh
Confidence 488999999999 9999999999999997 6999999999888877654
|
|
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.027 Score=50.49 Aligned_cols=114 Identities=13% Similarity=0.056 Sum_probs=76.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHC-------CC--eEEEeeCCchhHHHHHHHHHhcC----CceEEEeccCCCHHHHHHH
Q 024752 14 MTALVTGGTKGIGYAVVEELAAF-------GA--IVHTCSRNETELNQRIQEWKSKG----LQVSGSVCDLKIRAQREKL 80 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~-------g~--~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~ 80 (263)
-+|.|+|++|.+|.+++..|+.. |. ++++++++.+.++....++...- .++. +.. .+.++
T Consensus 101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~-i~~--~~ye~---- 173 (444)
T PLN00112 101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVS-IGI--DPYEV---- 173 (444)
T ss_pred eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceE-Eec--CCHHH----
Confidence 46899999999999999999988 65 79999999999988887776531 1111 111 12111
Q ss_pred HHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhh--CCCceEEEEcccc
Q 024752 81 METVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKS--AGNGNIIFISSVA 152 (263)
Q Consensus 81 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~iv~vsS~~ 152 (263)
+ ..-|++|..||.. .++ ..+ -.+.++.|. .+++...+.+.+ ...+.+|.+|-..
T Consensus 174 -------~-kdaDiVVitAG~p-rkp--G~t---R~dLl~~N~----~I~k~i~~~I~~~a~p~~ivIVVsNPv 229 (444)
T PLN00112 174 -------F-QDAEWALLIGAKP-RGP--GME---RADLLDING----QIFAEQGKALNEVASRNVKVIVVGNPC 229 (444)
T ss_pred -------h-CcCCEEEECCCCC-CCC--CCC---HHHHHHHHH----HHHHHHHHHHHHhcCCCeEEEEcCCcH
Confidence 1 4689999999974 222 123 345666666 455666666666 3567888887544
|
|
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.023 Score=47.00 Aligned_cols=37 Identities=32% Similarity=0.395 Sum_probs=32.7
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCc
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNE 47 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~ 47 (263)
.+++++|+|.|+ ||+|..+++.|+..|. ++.++|.+.
T Consensus 29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ 66 (245)
T PRK05690 29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDT 66 (245)
T ss_pred HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 368899999998 9999999999999998 688888764
|
|
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.023 Score=49.01 Aligned_cols=122 Identities=16% Similarity=0.099 Sum_probs=72.5
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCC-CeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
.+.+++.|.|+ |.+|..++..++..| ..+++++++++.++....++.... ........++...+.+ .+
T Consensus 3 ~~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~-~~~~~~~~i~~~~d~~-~l-------- 71 (319)
T PTZ00117 3 VKRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFS-TLVGSNINILGTNNYE-DI-------- 71 (319)
T ss_pred CCCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhc-cccCCCeEEEeCCCHH-Hh--------
Confidence 35678999997 889999999999999 689999999876554333332211 0000001111001112 11
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccc
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAG 153 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~ 153 (263)
..-|++|.++|..... ..+ -.+.+..|. .+.+.+.+.+.+.. .+.+|+++-...
T Consensus 72 ~~ADiVVitag~~~~~---g~~---r~dll~~n~----~i~~~i~~~i~~~~p~a~vivvsNP~d 126 (319)
T PTZ00117 72 KDSDVVVITAGVQRKE---EMT---REDLLTING----KIMKSVAESVKKYCPNAFVICVTNPLD 126 (319)
T ss_pred CCCCEEEECCCCCCCC---CCC---HHHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecChHH
Confidence 3569999999875322 123 244556666 45666666666543 456777766543
|
|
| >TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.04 Score=50.26 Aligned_cols=84 Identities=23% Similarity=0.181 Sum_probs=56.5
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCC-------------HHHH
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKI-------------RAQR 77 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-------------~~~~ 77 (263)
..+.+++|.|+ |.+|...+..+...|+.|++++++.++++.... .+. .++..|..+ .+..
T Consensus 162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~----lGa--~~v~v~~~e~g~~~~gYa~~~s~~~~ 234 (511)
T TIGR00561 162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS----MGA--EFLELDFKEEGGSGDGYAKVMSEEFI 234 (511)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCC--eEEeccccccccccccceeecCHHHH
Confidence 45679999996 899999999999999999999999886554332 222 233334321 2333
Q ss_pred HHHHHHHHhhcCCCccEEEeCCCCC
Q 024752 78 EKLMETVSSQFDGKLNILINNAGTF 102 (263)
Q Consensus 78 ~~~~~~~~~~~~~~id~li~~ag~~ 102 (263)
+...+.+.+.. ...|++|+++-+.
T Consensus 235 ~~~~~~~~e~~-~~~DIVI~Talip 258 (511)
T TIGR00561 235 AAEMELFAAQA-KEVDIIITTALIP 258 (511)
T ss_pred HHHHHHHHHHh-CCCCEEEECcccC
Confidence 33344444444 5799999999543
|
In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff. |
| >TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.067 Score=46.57 Aligned_cols=41 Identities=29% Similarity=0.396 Sum_probs=36.2
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHH
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR 53 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~ 53 (263)
.|++++|.|+ |++|..+++.+...|++|+++++++++.+..
T Consensus 166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~ 206 (349)
T TIGR03201 166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM 206 (349)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence 4899999999 9999999999999999999999988876544
|
Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. |
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.011 Score=50.72 Aligned_cols=74 Identities=22% Similarity=0.277 Sum_probs=54.0
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
++.+++++|.|+ |.+|+.+++.|.+.|. +|++++|++++.+++++++. . .. .+.++..+.+
T Consensus 175 ~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g---~--~~-----~~~~~~~~~l------- 236 (311)
T cd05213 175 NLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELG---G--NA-----VPLDELLELL------- 236 (311)
T ss_pred CccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcC---C--eE-----EeHHHHHHHH-------
Confidence 378999999987 9999999999998774 79999999988877776642 2 11 1222333332
Q ss_pred CCCccEEEeCCCCC
Q 024752 89 DGKLNILINNAGTF 102 (263)
Q Consensus 89 ~~~id~li~~ag~~ 102 (263)
...|++|.+.+..
T Consensus 237 -~~aDvVi~at~~~ 249 (311)
T cd05213 237 -NEADVVISATGAP 249 (311)
T ss_pred -hcCCEEEECCCCC
Confidence 3579999998853
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.045 Score=49.94 Aligned_cols=80 Identities=15% Similarity=0.169 Sum_probs=54.5
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCch-hHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET-ELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
..++++|+++|.|+ |++|.++|+.|+++|++|.++++... ......+.+++.+..+. ..+-..
T Consensus 11 ~~~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~--~~~~~~------------- 74 (480)
T PRK01438 11 HSDWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVR--LGPGPT------------- 74 (480)
T ss_pred ccCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEE--ECCCcc-------------
Confidence 44688999999997 67999999999999999999986543 33334455555444332 222111
Q ss_pred hcCCCccEEEeCCCCCCC
Q 024752 87 QFDGKLNILINNAGTFIP 104 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~ 104 (263)
.. ...|.+|...|+.+.
T Consensus 75 ~~-~~~D~Vv~s~Gi~~~ 91 (480)
T PRK01438 75 LP-EDTDLVVTSPGWRPD 91 (480)
T ss_pred cc-CCCCEEEECCCcCCC
Confidence 01 358999999998643
|
|
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.022 Score=41.84 Aligned_cols=76 Identities=18% Similarity=0.260 Sum_probs=54.9
Q ss_pred EEEEecCCCchHHHHHHHHHH-CCCe-EEEeeCCc----------------------hhHHHHHHHHHhcCCceEEEecc
Q 024752 15 TALVTGGTKGIGYAVVEELAA-FGAI-VHTCSRNE----------------------TELNQRIQEWKSKGLQVSGSVCD 70 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~-~g~~-V~~~~r~~----------------------~~~~~~~~~~~~~~~~~~~~~~D 70 (263)
+|+|.|++|-+|+.+++.+.+ .+.. |..++|+. +.+++..++ .. +..|
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~-----~D---VvID 73 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE-----AD---VVID 73 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH------S---EEEE
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc-----CC---EEEE
Confidence 689999999999999999998 6777 45566766 233333322 12 4579
Q ss_pred CCCHHHHHHHHHHHHhhcCCCccEEEeCCCC
Q 024752 71 LKIRAQREKLMETVSSQFDGKLNILINNAGT 101 (263)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~id~li~~ag~ 101 (263)
+|.++.+...++.+.+. ++.+++-..|.
T Consensus 74 fT~p~~~~~~~~~~~~~---g~~~ViGTTG~ 101 (124)
T PF01113_consen 74 FTNPDAVYDNLEYALKH---GVPLVIGTTGF 101 (124)
T ss_dssp ES-HHHHHHHHHHHHHH---T-EEEEE-SSS
T ss_pred cCChHHhHHHHHHHHhC---CCCEEEECCCC
Confidence 99999999999988775 57888888885
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.026 Score=49.58 Aligned_cols=78 Identities=24% Similarity=0.300 Sum_probs=51.2
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
.|++|+|.|+ +++|..+++.+...|+ +|+++++++++.+.. +++ +.... .|..+++ ..+++.+..++
T Consensus 191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~---Ga~~~---i~~~~~~----~~~~i~~~~~~ 258 (371)
T cd08281 191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-REL---GATAT---VNAGDPN----AVEQVRELTGG 258 (371)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHc---CCceE---eCCCchh----HHHHHHHHhCC
Confidence 4789999985 8999999988888999 699999888776543 332 33211 2333322 22233332224
Q ss_pred CccEEEeCCCC
Q 024752 91 KLNILINNAGT 101 (263)
Q Consensus 91 ~id~li~~ag~ 101 (263)
.+|++|.+.|.
T Consensus 259 g~d~vid~~G~ 269 (371)
T cd08281 259 GVDYAFEMAGS 269 (371)
T ss_pred CCCEEEECCCC
Confidence 69999999883
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd |
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.02 Score=47.95 Aligned_cols=117 Identities=14% Similarity=0.097 Sum_probs=70.4
Q ss_pred EEEecCCCchHHHHHHHHHHCC----CeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 16 ALVTGGTKGIGYAVVEELAAFG----AIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 16 vlVtGas~giG~~~a~~l~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
+.|.|++|.+|..++..|+..| ..|+++|++++.++....+++..-... ....++-.++..+.+ ..
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~--~~~~i~~~~d~~~~~--------~~ 70 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL--ADIKVSITDDPYEAF--------KD 70 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc--cCcEEEECCchHHHh--------CC
Confidence 4689998899999999999999 689999999988887777765431111 011111111112222 46
Q ss_pred ccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-CCceEEEEcccc
Q 024752 92 LNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-GNGNIIFISSVA 152 (263)
Q Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~ 152 (263)
-|++|..+|...... .+. ...+..|+ .+.+.+.+.+++. .++.++++|-..
T Consensus 71 aDiVv~t~~~~~~~g---~~r---~~~~~~n~----~i~~~i~~~i~~~~p~a~~i~~tNP~ 122 (263)
T cd00650 71 ADVVIITAGVGRKPG---MGR---LDLLKRNV----PIVKEIGDNIEKYSPDAWIIVVSNPV 122 (263)
T ss_pred CCEEEECCCCCCCcC---CCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecCcH
Confidence 799999999754321 121 22333343 4445555555543 456777776443
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.015 Score=52.57 Aligned_cols=59 Identities=19% Similarity=0.252 Sum_probs=44.3
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHH
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREK 79 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 79 (263)
.++|.|+ |.+|+++++.|.+.|+.|++++++++..+...+. ..+..+..|.++++.+++
T Consensus 2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~-----~~~~~~~gd~~~~~~l~~ 60 (453)
T PRK09496 2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDR-----LDVRTVVGNGSSPDVLRE 60 (453)
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh-----cCEEEEEeCCCCHHHHHH
Confidence 5888887 9999999999999999999999999876655431 124455667666554444
|
|
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.017 Score=49.53 Aligned_cols=117 Identities=15% Similarity=0.182 Sum_probs=68.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCc--hhHHHHHHHHHhc----CCceEEEeccCCCHHHHHHHHHHHH
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNE--TELNQRIQEWKSK----GLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~--~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
+++.|+|++|.+|..++..|+..|. .|++++|++ +.++....++.+. +.... ...+. +.+. +
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~---i~~~~--d~~~-l---- 70 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAE---IKISS--DLSD-V---- 70 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcE---EEECC--CHHH-h----
Confidence 4689999999999999999999987 499999965 4444333333321 11111 11111 1111 1
Q ss_pred hhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccc
Q 024752 86 SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAG 153 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 153 (263)
..-|++|.++|.... + ..+. .+.++.|+.-...+.+.+.+. ...+.+|++++...
T Consensus 71 ----~~aDiViitag~p~~-~--~~~r---~dl~~~n~~i~~~~~~~i~~~---~~~~~viv~~npvd 125 (309)
T cd05294 71 ----AGSDIVIITAGVPRK-E--GMSR---LDLAKKNAKIVKKYAKQIAEF---APDTKILVVTNPVD 125 (309)
T ss_pred ----CCCCEEEEecCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHHHHH---CCCeEEEEeCCchH
Confidence 467999999997432 1 1232 344555654444444443222 24578888887553
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.017 Score=49.15 Aligned_cols=79 Identities=22% Similarity=0.387 Sum_probs=52.6
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
++++++|+|+++++|..+++.+...|++|+.+.++++..+.. .+ .+.+.. .+..+.+....+.. ... +..
T Consensus 139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~---~g~~~~---~~~~~~~~~~~~~~-~~~--~~~ 208 (325)
T TIGR02824 139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EA---LGADIA---INYREEDFVEVVKA-ETG--GKG 208 (325)
T ss_pred CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HH---cCCcEE---EecCchhHHHHHHH-HcC--CCC
Confidence 578999999999999999999999999999999987765533 32 222211 22223322222222 111 135
Q ss_pred ccEEEeCCC
Q 024752 92 LNILINNAG 100 (263)
Q Consensus 92 id~li~~ag 100 (263)
+|.+++++|
T Consensus 209 ~d~~i~~~~ 217 (325)
T TIGR02824 209 VDVILDIVG 217 (325)
T ss_pred eEEEEECCc
Confidence 999999987
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized. |
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.029 Score=45.35 Aligned_cols=202 Identities=16% Similarity=0.039 Sum_probs=115.0
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
.|++-.+.++-|+.+..|.++++.-...+..|..+.|+..+ ++.+. ....+.+.+.|.-...-.+. ..
T Consensus 48 ~dve~e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k--~~l~s---w~~~vswh~gnsfssn~~k~-------~l 115 (283)
T KOG4288|consen 48 QDVEVEWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENK--QTLSS---WPTYVSWHRGNSFSSNPNKL-------KL 115 (283)
T ss_pred hhhhHHHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCc--chhhC---CCcccchhhccccccCcchh-------hh
Confidence 34555678999999999999999999999999999998652 23222 22334444444321110000 01
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
..+..++-++|.... ...+-.+|=.......++. .+.+..+++++|-...-.+..-...|=-+|.
T Consensus 116 -~g~t~v~e~~ggfgn----------~~~m~~ing~ani~a~kaa----~~~gv~~fvyISa~d~~~~~~i~rGY~~gKR 180 (283)
T KOG4288|consen 116 -SGPTFVYEMMGGFGN----------IILMDRINGTANINAVKAA----AKAGVPRFVYISAHDFGLPPLIPRGYIEGKR 180 (283)
T ss_pred -cCCcccHHHhcCccc----------hHHHHHhccHhhHHHHHHH----HHcCCceEEEEEhhhcCCCCccchhhhccch
Confidence 234555555553321 2334455655556666666 5667789999986543222222235888888
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccc-----c-c---hhHHHHHHhHhcCCC-----CCCCChhhHHH
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEK-----D-S---NFLEHANRMVLRTPM-----LRPGEPNEVSS 234 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~-----~-~---~~~~~~~~~~~~~~~-----~~~~~~~~va~ 234 (263)
+.|.-.. ...+.|-..++||+++....-.-.. - + ...+.+.+...+.|+ ..+...++||.
T Consensus 181 ~AE~Ell------~~~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~ 254 (283)
T KOG4288|consen 181 EAEAELL------KKFRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVAL 254 (283)
T ss_pred HHHHHHH------HhcCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHH
Confidence 7765332 2335677889999998652211000 0 0 111111222233333 23566899999
Q ss_pred HHHHHcCCC
Q 024752 235 VVAFLCLSA 243 (263)
Q Consensus 235 ~~~~l~s~~ 243 (263)
+++--+.|.
T Consensus 255 aal~ai~dp 263 (283)
T KOG4288|consen 255 AALKAIEDP 263 (283)
T ss_pred HHHHhccCC
Confidence 988766554
|
|
| >TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.058 Score=47.11 Aligned_cols=78 Identities=19% Similarity=0.241 Sum_probs=50.5
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCe-EEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC-
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAI-VHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD- 89 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~- 89 (263)
.|++++|.|+ |++|..+++.+...|+. |+.+++++++.+.. ++ .+... + .|..+++..+. +.+..+
T Consensus 176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~-~~---~Ga~~-~--i~~~~~~~~~~----i~~~~~~ 243 (358)
T TIGR03451 176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA-RE---FGATH-T--VNSSGTDPVEA----IRALTGG 243 (358)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HH---cCCce-E--EcCCCcCHHHH----HHHHhCC
Confidence 4889999985 99999999988889995 99998888765544 22 23321 1 23333222222 222222
Q ss_pred CCccEEEeCCCC
Q 024752 90 GKLNILINNAGT 101 (263)
Q Consensus 90 ~~id~li~~ag~ 101 (263)
..+|+++.+.|.
T Consensus 244 ~g~d~vid~~g~ 255 (358)
T TIGR03451 244 FGADVVIDAVGR 255 (358)
T ss_pred CCCCEEEECCCC
Confidence 359999999883
|
Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione. |
| >cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.024 Score=48.17 Aligned_cols=80 Identities=15% Similarity=0.201 Sum_probs=52.9
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
++++++|+|+++++|+++++.+...|++|+.+++++++.+.+ .+. +.. ..+ +..... ....+.+... +..
T Consensus 144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~---g~~-~~~--~~~~~~-~~~~~~~~~~--~~~ 213 (328)
T cd08268 144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LAL---GAA-HVI--VTDEED-LVAEVLRITG--GKG 213 (328)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc---CCC-EEE--ecCCcc-HHHHHHHHhC--CCC
Confidence 578999999999999999999999999999999987765544 222 221 111 222222 2222222211 136
Q ss_pred ccEEEeCCCC
Q 024752 92 LNILINNAGT 101 (263)
Q Consensus 92 id~li~~ag~ 101 (263)
+|++++++|.
T Consensus 214 ~d~vi~~~~~ 223 (328)
T cd08268 214 VDVVFDPVGG 223 (328)
T ss_pred ceEEEECCch
Confidence 9999999883
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.015 Score=49.27 Aligned_cols=82 Identities=15% Similarity=0.086 Sum_probs=56.7
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
....+++||.+.|.|.++-+|+.++..|.++|++|.++.|......+..++ +..+..-+.++..+...+
T Consensus 152 ~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~-------ADIVIsavg~~~~v~~~~---- 220 (301)
T PRK14194 152 DTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQ-------ADIVVAAVGRPRLIDADW---- 220 (301)
T ss_pred HhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhc-------CCEEEEecCChhcccHhh----
Confidence 345789999999999999999999999999999999998776654444332 223333444444444433
Q ss_pred hhcCCCccEEEeCCCCC
Q 024752 86 SQFDGKLNILINNAGTF 102 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~ 102 (263)
-+...+|-..|+.
T Consensus 221 ----ik~GaiVIDvgin 233 (301)
T PRK14194 221 ----LKPGAVVIDVGIN 233 (301)
T ss_pred ----ccCCcEEEEeccc
Confidence 2345566666654
|
|
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.011 Score=49.80 Aligned_cols=42 Identities=24% Similarity=0.241 Sum_probs=37.9
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE 47 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~ 47 (263)
....+++||.++|.|.+.-+|+.++..|.++|++|..+.+..
T Consensus 151 ~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t 192 (286)
T PRK14175 151 HADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS 192 (286)
T ss_pred HcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence 345689999999999999999999999999999999988754
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.019 Score=41.43 Aligned_cols=71 Identities=20% Similarity=0.160 Sum_probs=53.3
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCccEE
Q 024752 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNIL 95 (263)
Q Consensus 16 vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~l 95 (263)
++|.|.+ .+|+.+++.|.+.+.+|++++++++..+...++ + +.++..|.++++.++++-- .+.+.+
T Consensus 1 vvI~G~g-~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~----~--~~~i~gd~~~~~~l~~a~i-------~~a~~v 66 (116)
T PF02254_consen 1 VVIIGYG-RIGREIAEQLKEGGIDVVVIDRDPERVEELREE----G--VEVIYGDATDPEVLERAGI-------EKADAV 66 (116)
T ss_dssp EEEES-S-HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT----T--SEEEES-TTSHHHHHHTTG-------GCESEE
T ss_pred eEEEcCC-HHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhc----c--cccccccchhhhHHhhcCc-------cccCEE
Confidence 4667774 799999999999777999999999876655432 3 6688899999988777521 467888
Q ss_pred EeCCC
Q 024752 96 INNAG 100 (263)
Q Consensus 96 i~~ag 100 (263)
+....
T Consensus 67 v~~~~ 71 (116)
T PF02254_consen 67 VILTD 71 (116)
T ss_dssp EEESS
T ss_pred EEccC
Confidence 77766
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.041 Score=44.49 Aligned_cols=37 Identities=22% Similarity=0.287 Sum_probs=32.7
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCc
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNE 47 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~ 47 (263)
.+++++|+|.|+ ||+|..+++.|+..|. ++.++|.+.
T Consensus 25 ~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ 62 (212)
T PRK08644 25 KLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDV 62 (212)
T ss_pred HHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 477889999995 8999999999999999 599999873
|
|
| >COG3007 Uncharacterized paraquat-inducible protein B [Function unknown] | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.52 Score=39.59 Aligned_cols=184 Identities=17% Similarity=0.149 Sum_probs=104.1
Q ss_pred CCEEEEecCCCchHHHH--HHHHHHCCCeEEEee--CCch-----hH----HHHHHHH-HhcCCceEEEeccCCCHHHHH
Q 024752 13 GMTALVTGGTKGIGYAV--VEELAAFGAIVHTCS--RNET-----EL----NQRIQEW-KSKGLQVSGSVCDLKIRAQRE 78 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~--a~~l~~~g~~V~~~~--r~~~-----~~----~~~~~~~-~~~~~~~~~~~~D~~~~~~~~ 78 (263)
.|+|||.|+|+|.|++. +..|- .|+.-+.+. |... .. .....+. .+.|.-...+..|.-..+--+
T Consensus 41 PKkVLviGaSsGyGLa~RIsaaFG-~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~k~ 119 (398)
T COG3007 41 PKKVLVIGASSGYGLAARISAAFG-PGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEMKQ 119 (398)
T ss_pred CceEEEEecCCcccHHHHHHHHhC-CCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCceeeecccchhhHHHHH
Confidence 58999999999998864 33343 456544433 2111 10 1112222 234555666778988888888
Q ss_pred HHHHHHHhhcCCCccEEEeCCCCCCCCCCC----------------------------------CCCHHHHHHHHHhhhH
Q 024752 79 KLMETVSSQFDGKLNILINNAGTFIPKETT----------------------------------EFTEEDFSTVMTTNFE 124 (263)
Q Consensus 79 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~----------------------------------~~~~~~~~~~~~~n~~ 124 (263)
.+++.+++.+ |++|.+|+.-+...+.... ..+.++++....|.=-
T Consensus 120 kvIe~Ik~~~-g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~~lepAseqEI~~Tv~VMGG 198 (398)
T COG3007 120 KVIEAIKQDF-GKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEATLEPASEQEIADTVAVMGG 198 (398)
T ss_pred HHHHHHHHhh-ccccEEEEeccCccccCCCcchhhHhhhcchhhhccccccccccceeeeeecccccHHHHHHHHHhhCc
Confidence 9999999999 7999999886543211000 0122333333222100
Q ss_pred h-HHHHHHHHhHHHhhCCCceEEEEccccccccCC--CCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccC
Q 024752 125 S-AYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIP--MCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRT 198 (263)
Q Consensus 125 ~-~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~--~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t 198 (263)
- .-..+.+++..-.-..+.+-+..|-+......| ..+.-+.+|.=|+.-+..+...++..|-..+..-.-.+-|
T Consensus 199 eDWq~WidaLl~advlaeg~kTiAfsYiG~~iT~~IYw~GtiG~AK~DLd~~~~~inekLa~~gG~A~vsVlKavVT 275 (398)
T COG3007 199 EDWQMWIDALLEADVLAEGAKTIAFSYIGEKITHPIYWDGTIGRAKKDLDQKSLAINEKLAALGGGARVSVLKAVVT 275 (398)
T ss_pred chHHHHHHHHHhccccccCceEEEEEecCCccccceeeccccchhhhcHHHHHHHHHHHHHhcCCCeeeeehHHHHh
Confidence 0 012333333222222345666666655544433 4577899999999999999999887654554443333333
|
|
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.043 Score=48.07 Aligned_cols=38 Identities=24% Similarity=0.271 Sum_probs=33.2
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNE 47 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~ 47 (263)
-.+++++|+|.|+ ||+|..+++.|+..|. ++.++|.+.
T Consensus 24 ~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 24 QSLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred HHHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 3478899999988 7999999999999998 688888864
|
|
| >COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.03 Score=45.59 Aligned_cols=82 Identities=21% Similarity=0.268 Sum_probs=57.2
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
.+.++.|+.+|=.||++| .+++.+|+.|++|..+|-+++..+.......+.+..+.+.+ ..++++.+
T Consensus 54 ~~~~l~g~~vLDvGCGgG---~Lse~mAr~Ga~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~----------~~~edl~~ 120 (243)
T COG2227 54 LRFDLPGLRVLDVGCGGG---ILSEPLARLGASVTGIDASEKPIEVAKLHALESGVNIDYRQ----------ATVEDLAS 120 (243)
T ss_pred cccCCCCCeEEEecCCcc---HhhHHHHHCCCeeEEecCChHHHHHHHHhhhhccccccchh----------hhHHHHHh
Confidence 344589999999999999 68999999999999999999888766555444433322211 22233333
Q ss_pred hcCCCccEEEeCCCCC
Q 024752 87 QFDGKLNILINNAGTF 102 (263)
Q Consensus 87 ~~~~~id~li~~ag~~ 102 (263)
. +++.|+|++.==+-
T Consensus 121 ~-~~~FDvV~cmEVlE 135 (243)
T COG2227 121 A-GGQFDVVTCMEVLE 135 (243)
T ss_pred c-CCCccEEEEhhHHH
Confidence 3 26899998875443
|
|
| >PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.0099 Score=45.69 Aligned_cols=48 Identities=23% Similarity=0.310 Sum_probs=36.7
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR 53 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~ 53 (263)
....+++||+++|.|.+.-+|+.++..|.++|++|..+....+.+++.
T Consensus 29 ~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~ 76 (160)
T PF02882_consen 29 YYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEI 76 (160)
T ss_dssp HTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHH
T ss_pred hcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccce
Confidence 356789999999999999999999999999999999988776544433
|
Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A .... |
| >PRK14967 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.15 Score=41.44 Aligned_cols=123 Identities=15% Similarity=0.106 Sum_probs=69.5
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
++..+|-.|++.|. ++..+++.|+ +|++++.++..++...+.+...+.++.++..|+.+. + . .+
T Consensus 36 ~~~~vLDlGcG~G~---~~~~la~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~~~------~---~---~~ 100 (223)
T PRK14967 36 PGRRVLDLCTGSGA---LAVAAAAAGAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGDWARA------V---E---FR 100 (223)
T ss_pred CCCeEEEecCCHHH---HHHHHHHcCCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECchhhh------c---c---CC
Confidence 36789999987754 3444555676 899999999887766655554455566666776431 1 1 15
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhh---hHhHHHHHHHHhHHHhhCCCceEEEEcccc
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTN---FESAYHLSQLAHPLLKSAGNGNIIFISSVA 152 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n---~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~ 152 (263)
++|+++.|..+....... .........+..- ......+++.+...|+. +|+++++.+..
T Consensus 101 ~fD~Vi~npPy~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~--gG~l~~~~~~~ 162 (223)
T PRK14967 101 PFDVVVSNPPYVPAPPDA-PPSRGPARAWDAGPDGRAVLDRLCDAAPALLAP--GGSLLLVQSEL 162 (223)
T ss_pred CeeEEEECCCCCCCCccc-ccccChhHhhhCCCcHHHHHHHHHHHHHHhcCC--CcEEEEEEecc
Confidence 789999998765332110 0011111111110 11123345555555544 68888776543
|
|
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.028 Score=43.40 Aligned_cols=85 Identities=15% Similarity=0.090 Sum_probs=57.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHH-------HhcCCceEEEeccCCCHHHHHHHHHH--H
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEW-------KSKGLQVSGSVCDLKIRAQREKLMET--V 84 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~~~~D~~~~~~~~~~~~~--~ 84 (263)
+++-+.|. |-+|..++++|++.|++|.+.+|++++.+++.++- .+.-..+..+..-+.+.+++++++.. +
T Consensus 2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i 80 (163)
T PF03446_consen 2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENI 80 (163)
T ss_dssp BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTH
T ss_pred CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHH
Confidence 45667776 78999999999999999999999998887766431 10011245566778888899999887 6
Q ss_pred HhhcCCCccEEEeCCC
Q 024752 85 SSQFDGKLNILINNAG 100 (263)
Q Consensus 85 ~~~~~~~id~li~~ag 100 (263)
.... .+=.++|.+.-
T Consensus 81 ~~~l-~~g~iiid~sT 95 (163)
T PF03446_consen 81 LAGL-RPGKIIIDMST 95 (163)
T ss_dssp GGGS--TTEEEEE-SS
T ss_pred hhcc-ccceEEEecCC
Confidence 6654 33455555544
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.033 Score=47.56 Aligned_cols=80 Identities=13% Similarity=0.137 Sum_probs=53.1
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
+|.+++|.|+++++|.++++.....|++|+.+.++.+..+.+.+ + +... .+ +-.+. +..+.+.+... +..
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~---g~~~-~~--~~~~~-~~~~~i~~~~~--~~~ 208 (324)
T cd08292 139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-L---GIGP-VV--STEQP-GWQDKVREAAG--GAP 208 (324)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-c---CCCE-EE--cCCCc-hHHHHHHHHhC--CCC
Confidence 47899999999999999999999999999999888776555532 2 2221 11 22222 22222222221 136
Q ss_pred ccEEEeCCCC
Q 024752 92 LNILINNAGT 101 (263)
Q Consensus 92 id~li~~ag~ 101 (263)
+|+++.+.|.
T Consensus 209 ~d~v~d~~g~ 218 (324)
T cd08292 209 ISVALDSVGG 218 (324)
T ss_pred CcEEEECCCC
Confidence 9999998883
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina |
| >TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.1 Score=43.92 Aligned_cols=78 Identities=18% Similarity=0.217 Sum_probs=48.7
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAI-VHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
..+++++|.|+ |++|..+++.+...|++ |+++++++++.+. +++ .+.... .|..+ ..+.+.++. .+
T Consensus 119 ~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~-a~~---~Ga~~~---i~~~~---~~~~~~~~~--~~ 185 (280)
T TIGR03366 119 LKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRREL-ALS---FGATAL---AEPEV---LAERQGGLQ--NG 185 (280)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-HHH---cCCcEe---cCchh---hHHHHHHHh--CC
Confidence 36899999986 89999999988889996 8888887766543 333 232211 12211 112222221 12
Q ss_pred CCccEEEeCCCC
Q 024752 90 GKLNILINNAGT 101 (263)
Q Consensus 90 ~~id~li~~ag~ 101 (263)
..+|+++.+.|.
T Consensus 186 ~g~d~vid~~G~ 197 (280)
T TIGR03366 186 RGVDVALEFSGA 197 (280)
T ss_pred CCCCEEEECCCC
Confidence 359999999883
|
This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. |
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.038 Score=54.59 Aligned_cols=79 Identities=14% Similarity=0.107 Sum_probs=61.9
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCC-Ce-------------EEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHH
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFG-AI-------------VHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQ 76 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g-~~-------------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 76 (263)
-+.|+|+|.|+ |.+|+..++.|++.. +. |.+.+++.+.++++.+.. .++..++.|++|.++
T Consensus 567 ~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~----~~~~~v~lDv~D~e~ 641 (1042)
T PLN02819 567 KKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI----ENAEAVQLDVSDSES 641 (1042)
T ss_pred ccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc----CCCceEEeecCCHHH
Confidence 45789999997 999999999998753 33 888999988877766543 235678899999988
Q ss_pred HHHHHHHHHhhcCCCccEEEeCCCCC
Q 024752 77 REKLMETVSSQFDGKLNILINNAGTF 102 (263)
Q Consensus 77 ~~~~~~~~~~~~~~~id~li~~ag~~ 102 (263)
+.++++ .+|+||++....
T Consensus 642 L~~~v~--------~~DaVIsalP~~ 659 (1042)
T PLN02819 642 LLKYVS--------QVDVVISLLPAS 659 (1042)
T ss_pred HHHhhc--------CCCEEEECCCch
Confidence 777763 489999998754
|
|
| >cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.099 Score=45.42 Aligned_cols=78 Identities=26% Similarity=0.299 Sum_probs=51.4
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
+|++++|+|+ +++|..+++.+...|+ +|+++++++++.+.. .++ +.... .|..+.+. .+++.+..++
T Consensus 172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~~---ga~~~---i~~~~~~~----~~~l~~~~~~ 239 (351)
T cd08233 172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELA-EEL---GATIV---LDPTEVDV----VAEVRKLTGG 239 (351)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh---CCCEE---ECCCccCH----HHHHHHHhCC
Confidence 5789999985 8999999999999999 788888888776544 332 33211 23333222 2223332223
Q ss_pred -CccEEEeCCCC
Q 024752 91 -KLNILINNAGT 101 (263)
Q Consensus 91 -~id~li~~ag~ 101 (263)
.+|+++.+.|.
T Consensus 240 ~~~d~vid~~g~ 251 (351)
T cd08233 240 GGVDVSFDCAGV 251 (351)
T ss_pred CCCCEEEECCCC
Confidence 49999999883
|
(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. |
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.064 Score=43.87 Aligned_cols=81 Identities=19% Similarity=0.293 Sum_probs=53.0
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCc-------------------hhHHHHHHHHHhcCC--ceEEE
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNE-------------------TELNQRIQEWKSKGL--QVSGS 67 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~--~~~~~ 67 (263)
.+++++|+|.| .||+|.++++.|+..|. ++.++|.+. .+.+.+.+.+++... ++..+
T Consensus 18 ~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~ 96 (228)
T cd00757 18 KLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY 96 (228)
T ss_pred HHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence 47788999998 57999999999999998 688886543 334445555554433 34444
Q ss_pred eccCCCHHHHHHHHHHHHhhcCCCccEEEeCCC
Q 024752 68 VCDLKIRAQREKLMETVSSQFDGKLNILINNAG 100 (263)
Q Consensus 68 ~~D~~~~~~~~~~~~~~~~~~~~~id~li~~ag 100 (263)
..+++ .+.+.+++ ...|++|.+..
T Consensus 97 ~~~i~-~~~~~~~~--------~~~DvVi~~~d 120 (228)
T cd00757 97 NERLD-AENAEELI--------AGYDLVLDCTD 120 (228)
T ss_pred cceeC-HHHHHHHH--------hCCCEEEEcCC
Confidence 44443 23333332 35788888766
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH) | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.14 Score=44.69 Aligned_cols=40 Identities=25% Similarity=0.263 Sum_probs=34.3
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHH
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQ 52 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~ 52 (263)
.+++++|+| ++++|..+++.+...|+ +|+.+++++++.+.
T Consensus 177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~ 217 (361)
T cd08231 177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLEL 217 (361)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH
Confidence 688999997 59999999999889999 89999888776543
|
This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.045 Score=49.42 Aligned_cols=79 Identities=16% Similarity=0.082 Sum_probs=60.5
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
....+.++|.|+ |.+|+.+++.|.+.|.+|++++++++..++..++ +..+..+..|.++++.++++- -
T Consensus 228 ~~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~----~~~~~~i~gd~~~~~~L~~~~-------~ 295 (453)
T PRK09496 228 EKPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEE----LPNTLVLHGDGTDQELLEEEG-------I 295 (453)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH----CCCCeEEECCCCCHHHHHhcC-------C
Confidence 356788999999 8999999999999999999999999876655443 234567788999887765542 1
Q ss_pred CCccEEEeCCC
Q 024752 90 GKLNILINNAG 100 (263)
Q Consensus 90 ~~id~li~~ag 100 (263)
.+.|.+|....
T Consensus 296 ~~a~~vi~~~~ 306 (453)
T PRK09496 296 DEADAFIALTN 306 (453)
T ss_pred ccCCEEEECCC
Confidence 46788876555
|
|
| >PRK10309 galactitol-1-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.15 Score=44.30 Aligned_cols=40 Identities=25% Similarity=0.390 Sum_probs=33.8
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCe-EEEeeCCchhHHH
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAI-VHTCSRNETELNQ 52 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~-V~~~~r~~~~~~~ 52 (263)
.|++++|+| ++++|..+++.+...|++ |+.+++++++.+.
T Consensus 160 ~g~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~ 200 (347)
T PRK10309 160 EGKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDINSEKLAL 200 (347)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHH
Confidence 588999997 599999999999999997 7888888877654
|
|
| >cd08244 MDR_enoyl_red Possible enoyl reductase | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.051 Score=46.39 Aligned_cols=78 Identities=21% Similarity=0.313 Sum_probs=53.0
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC-C
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD-G 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~ 90 (263)
.+.+++|+|+++++|..+++.+...|++|+.++++.+..+.+ ++ .+... ..|..+.+..+.+. +..+ .
T Consensus 142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~---~g~~~---~~~~~~~~~~~~~~----~~~~~~ 210 (324)
T cd08244 142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RA---LGADV---AVDYTRPDWPDQVR----EALGGG 210 (324)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HH---cCCCE---EEecCCccHHHHHH----HHcCCC
Confidence 478999999999999999999999999999999888766544 33 22221 12333332223222 2222 3
Q ss_pred CccEEEeCCC
Q 024752 91 KLNILINNAG 100 (263)
Q Consensus 91 ~id~li~~ag 100 (263)
.+|+++++.|
T Consensus 211 ~~d~vl~~~g 220 (324)
T cd08244 211 GVTVVLDGVG 220 (324)
T ss_pred CceEEEECCC
Confidence 5999999987
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr |
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.054 Score=46.81 Aligned_cols=118 Identities=13% Similarity=0.120 Sum_probs=70.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-------eEEEeeCCch--hHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHH
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGA-------IVHTCSRNET--ELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~-------~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 84 (263)
++|.|+|++|.+|..++..|+..|. .++++++++. .++....++...-..... ...++. ++ .
T Consensus 5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~-~~~i~~-~~----y--- 75 (326)
T PRK05442 5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLA-GVVITD-DP----N--- 75 (326)
T ss_pred cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcC-CcEEec-Ch----H---
Confidence 5889999999999999999998764 6999998543 344444343321100000 001110 01 1
Q ss_pred HhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhh-C-CCceEEEEcccc
Q 024752 85 SSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKS-A-GNGNIIFISSVA 152 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~-~~~~iv~vsS~~ 152 (263)
+.+ ..-|++|..||... .+ .++-.+.+..|. .+++.+.+.+.+ . ..+.++.+|-..
T Consensus 76 -~~~-~daDiVVitaG~~~-k~-----g~tR~dll~~Na----~i~~~i~~~i~~~~~~~~iiivvsNPv 133 (326)
T PRK05442 76 -VAF-KDADVALLVGARPR-GP-----GMERKDLLEANG----AIFTAQGKALNEVAARDVKVLVVGNPA 133 (326)
T ss_pred -HHh-CCCCEEEEeCCCCC-CC-----CCcHHHHHHHHH----HHHHHHHHHHHHhCCCCeEEEEeCCch
Confidence 111 46799999999642 22 223455666666 566666666676 3 367788777544
|
|
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.074 Score=42.58 Aligned_cols=36 Identities=25% Similarity=0.272 Sum_probs=32.7
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRN 46 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~ 46 (263)
.++.++|+|.|+ ||+|..++..|++.|. +++++|++
T Consensus 18 ~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 18 KLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence 377899999998 7899999999999999 69999998
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.021 Score=44.92 Aligned_cols=43 Identities=19% Similarity=0.231 Sum_probs=35.6
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHH
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWK 58 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~ 58 (263)
+|.|.|+ |.+|+.+|..|+..|++|.+++++++.++...+.+.
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~ 43 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIE 43 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHH
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHH
Confidence 4678888 899999999999999999999999998877666554
|
1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B .... |
| >PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.0055 Score=43.54 Aligned_cols=38 Identities=32% Similarity=0.315 Sum_probs=33.0
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE 47 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~ 47 (263)
++++||+++|.|+ |.+|..-++.|++.|++|.+++...
T Consensus 3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~ 40 (103)
T PF13241_consen 3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI 40 (103)
T ss_dssp E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence 6899999999999 8889999999999999999999987
|
|
| >cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.049 Score=47.08 Aligned_cols=78 Identities=21% Similarity=0.256 Sum_probs=51.6
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCe-EEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAI-VHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
.|++++|+|+ |++|..+++.+...|++ |+++++++++.+.. +++ +... ..|..+++ .+++.+ +.. +.
T Consensus 163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~---ga~~---~i~~~~~~-~~~~~~-~~~--~~ 230 (339)
T cd08239 163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KAL---GADF---VINSGQDD-VQEIRE-LTS--GA 230 (339)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh---CCCE---EEcCCcch-HHHHHH-HhC--CC
Confidence 4899999986 89999999999999998 99999888765543 333 3221 12333332 222222 111 13
Q ss_pred CccEEEeCCCC
Q 024752 91 KLNILINNAGT 101 (263)
Q Consensus 91 ~id~li~~ag~ 101 (263)
.+|++|.+.|.
T Consensus 231 ~~d~vid~~g~ 241 (339)
T cd08239 231 GADVAIECSGN 241 (339)
T ss_pred CCCEEEECCCC
Confidence 69999999883
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at |
| >PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.032 Score=47.33 Aligned_cols=81 Identities=19% Similarity=0.120 Sum_probs=55.4
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEee-CCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCS-RNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
...+++||+++|.|-++-+|+.+|..|.++|+.|.++. |+.. +++..++ +..+.+-+.+++.+...+
T Consensus 152 ~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~-l~e~~~~-------ADIVIsavg~~~~v~~~~---- 219 (296)
T PRK14188 152 VHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD-LPAVCRR-------ADILVAAVGRPEMVKGDW---- 219 (296)
T ss_pred hCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC-HHHHHhc-------CCEEEEecCChhhcchhe----
Confidence 45689999999999999999999999999999999994 6643 3322221 233444455555444432
Q ss_pred hhcCCCccEEEeCCCCCC
Q 024752 86 SQFDGKLNILINNAGTFI 103 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~ 103 (263)
-+...+|-..|+..
T Consensus 220 ----lk~GavVIDvGin~ 233 (296)
T PRK14188 220 ----IKPGATVIDVGINR 233 (296)
T ss_pred ----ecCCCEEEEcCCcc
Confidence 24556666677654
|
|
| >cd08241 QOR1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.051 Score=46.02 Aligned_cols=42 Identities=36% Similarity=0.478 Sum_probs=37.0
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHH
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR 53 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~ 53 (263)
+++.++|+|+++++|..+++.+...|+.|+.++++.+..+.+
T Consensus 139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~ 180 (323)
T cd08241 139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA 180 (323)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH
Confidence 578999999999999999999999999999999987665443
|
QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic |
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.061 Score=47.63 Aligned_cols=73 Identities=16% Similarity=0.229 Sum_probs=54.8
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
+++|++||.|++ -+|.-+|++|++.|. +|++..|+.++++++++++. .+....+++...+
T Consensus 176 L~~~~vlvIGAG-em~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~----------~~~~~l~el~~~l-------- 236 (414)
T COG0373 176 LKDKKVLVIGAG-EMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG----------AEAVALEELLEAL-------- 236 (414)
T ss_pred cccCeEEEEccc-HHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC----------CeeecHHHHHHhh--------
Confidence 899999999984 579999999999995 79999999999999988764 1222222333333
Q ss_pred CCccEEEeCCCCC
Q 024752 90 GKLNILINNAGTF 102 (263)
Q Consensus 90 ~~id~li~~ag~~ 102 (263)
...|++|.+.|..
T Consensus 237 ~~~DvVissTsa~ 249 (414)
T COG0373 237 AEADVVISSTSAP 249 (414)
T ss_pred hhCCEEEEecCCC
Confidence 4568888887753
|
|
| >PRK12480 D-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.093 Score=45.46 Aligned_cols=89 Identities=19% Similarity=0.168 Sum_probs=56.5
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHH---HHHh--cCCceEEEeccCCCHHHHHHHH-H
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQ---EWKS--KGLQVSGSVCDLKIRAQREKLM-E 82 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~---~~~~--~~~~~~~~~~D~~~~~~~~~~~-~ 82 (263)
.+++|+++.|.|. |.||+++|+.|...|++|+..+|++........ ++.+ ...++..+.+..+.. ....+ +
T Consensus 142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~~--t~~li~~ 218 (330)
T PRK12480 142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANKE--SYHLFDK 218 (330)
T ss_pred cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcHH--HHHHHhH
Confidence 4689999999986 669999999999999999999998754332111 1221 134556666665542 22222 3
Q ss_pred HHHhhcCCCccEEEeCCCCC
Q 024752 83 TVSSQFDGKLNILINNAGTF 102 (263)
Q Consensus 83 ~~~~~~~~~id~li~~ag~~ 102 (263)
...+. -+.+.++-|++.+
T Consensus 219 ~~l~~--mk~gavlIN~aRG 236 (330)
T PRK12480 219 AMFDH--VKKGAILVNAARG 236 (330)
T ss_pred HHHhc--CCCCcEEEEcCCc
Confidence 33333 2456677777654
|
|
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.022 Score=46.32 Aligned_cols=42 Identities=24% Similarity=0.257 Sum_probs=37.4
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHH
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE 56 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~ 56 (263)
++.|.||+|.+|.++++.|++.|++|.+.+|++++.++....
T Consensus 2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~ 43 (219)
T TIGR01915 2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK 43 (219)
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence 588999999999999999999999999999999887766554
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >TIGR00537 hemK_rel_arch HemK-related putative methylase | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.36 Score=37.70 Aligned_cols=77 Identities=21% Similarity=0.232 Sum_probs=56.5
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
.++++++=.|++.|. ++..+++.+.+|+.++.+++..+...+.+...+.++.++.+|+.+. . .+
T Consensus 18 ~~~~~vLdlG~G~G~---~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~------~-------~~ 81 (179)
T TIGR00537 18 LKPDDVLEIGAGTGL---VAIRLKGKGKCILTTDINPFAVKELRENAKLNNVGLDVVMTDLFKG------V-------RG 81 (179)
T ss_pred cCCCeEEEeCCChhH---HHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCceEEEEcccccc------c-------CC
Confidence 456788888887774 4556667777999999999988877777666556677788886541 0 14
Q ss_pred CccEEEeCCCCCC
Q 024752 91 KLNILINNAGTFI 103 (263)
Q Consensus 91 ~id~li~~ag~~~ 103 (263)
++|+++.|.....
T Consensus 82 ~fD~Vi~n~p~~~ 94 (179)
T TIGR00537 82 KFDVILFNPPYLP 94 (179)
T ss_pred cccEEEECCCCCC
Confidence 7899999977643
|
The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes. |
| >cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1 | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.07 Score=45.81 Aligned_cols=77 Identities=14% Similarity=0.141 Sum_probs=47.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
++++++|+++++|..+++.....|++|+.+++++++.+... + .+.... + |..+++..+. +.++.. +..+|
T Consensus 145 ~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~-~---~g~~~~-i--~~~~~~~~~~-v~~~~~--~~~~d 214 (324)
T cd08291 145 KAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK-K---IGAEYV-L--NSSDPDFLED-LKELIA--KLNAT 214 (324)
T ss_pred cEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-H---cCCcEE-E--ECCCccHHHH-HHHHhC--CCCCc
Confidence 45555699999999999888888999999999887655443 2 233221 1 2222222222 222211 13699
Q ss_pred EEEeCCC
Q 024752 94 ILINNAG 100 (263)
Q Consensus 94 ~li~~ag 100 (263)
+++.+.|
T Consensus 215 ~vid~~g 221 (324)
T cd08291 215 IFFDAVG 221 (324)
T ss_pred EEEECCC
Confidence 9999887
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin |
| >TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.1 Score=46.02 Aligned_cols=114 Identities=13% Similarity=0.049 Sum_probs=72.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-e----EEE----eeCCchhHHHHHHHHHhcC----CceEEEeccCCCHHHHHHH
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGA-I----VHT----CSRNETELNQRIQEWKSKG----LQVSGSVCDLKIRAQREKL 80 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~-~----V~~----~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~ 80 (263)
=+|.|+|++|.+|.++|..++..|. . |.+ ++++.+.++....++...- .++. +.. .+.++
T Consensus 45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~-i~~--~~y~~---- 117 (387)
T TIGR01757 45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVS-IGI--DPYEV---- 117 (387)
T ss_pred eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceE-Eec--CCHHH----
Confidence 4689999999999999999998875 3 444 5889988887777776421 1111 111 11111
Q ss_pred HHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhh-C-CCceEEEEcccc
Q 024752 81 METVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKS-A-GNGNIIFISSVA 152 (263)
Q Consensus 81 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~-~~~~iv~vsS~~ 152 (263)
+ ..-|++|..||... .+ .++-.+.+..|+ .+++.+.+.+.+ . ..+.+|.+|-..
T Consensus 118 -------~-kdaDIVVitAG~pr-kp-----g~tR~dll~~N~----~I~k~i~~~I~~~a~~~~iviVVsNPv 173 (387)
T TIGR01757 118 -------F-EDADWALLIGAKPR-GP-----GMERADLLDING----QIFADQGKALNAVASKNCKVLVVGNPC 173 (387)
T ss_pred -------h-CCCCEEEECCCCCC-CC-----CCCHHHHHHHHH----HHHHHHHHHHHHhCCCCeEEEEcCCcH
Confidence 1 46899999999742 22 122345666666 455666666666 3 467788777544
|
This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized. |
| >PTZ00082 L-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.12 Score=44.67 Aligned_cols=123 Identities=11% Similarity=0.026 Sum_probs=72.4
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHh----cCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKS----KGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
++.+++.|.| +|.+|..++..++..|. .|++++++++.+.....++.. .+....... .+|.++ +
T Consensus 4 ~~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d~~~-------l- 72 (321)
T PTZ00082 4 IKRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNNYED-------I- 72 (321)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCCHHH-------h-
Confidence 3457899999 58899999999999995 899999998865432222221 111122111 122211 1
Q ss_pred hhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccc
Q 024752 86 SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAG 153 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~ 153 (263)
..-|++|..+|......-.+.+++ -.+.+..|+ .+.+.+.+.+.+.. .+.++++|-...
T Consensus 73 ----~~aDiVI~tag~~~~~~~~~~~~~-r~~~l~~n~----~i~~~i~~~i~~~~p~a~~iv~sNP~d 132 (321)
T PTZ00082 73 ----AGSDVVIVTAGLTKRPGKSDKEWN-RDDLLPLNA----KIMDEVAEGIKKYCPNAFVIVITNPLD 132 (321)
T ss_pred ----CCCCEEEECCCCCCCCCCCcCCCC-HHHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecCcHH
Confidence 457999999997643221111212 234455554 45666666666643 457777776553
|
|
| >TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.06 Score=47.29 Aligned_cols=79 Identities=18% Similarity=0.232 Sum_probs=52.0
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCC-HHHHHHHHHHHHhhcC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKI-RAQREKLMETVSSQFD 89 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 89 (263)
.|++++|+|+ |++|...++.+...|+ +|+.+++++++.+.. .++ +... ..|..+ .+++.+.+.++ ..
T Consensus 185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~---Ga~~---~i~~~~~~~~~~~~v~~~---~~ 253 (368)
T TIGR02818 185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKL---GATD---CVNPNDYDKPIQEVIVEI---TD 253 (368)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh---CCCe---EEcccccchhHHHHHHHH---hC
Confidence 4889999985 8999999998888999 799999988776544 332 3221 123332 22233333322 22
Q ss_pred CCccEEEeCCCC
Q 024752 90 GKLNILINNAGT 101 (263)
Q Consensus 90 ~~id~li~~ag~ 101 (263)
+.+|++|.++|.
T Consensus 254 ~g~d~vid~~G~ 265 (368)
T TIGR02818 254 GGVDYSFECIGN 265 (368)
T ss_pred CCCCEEEECCCC
Confidence 469999999984
|
The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols. |
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.14 Score=38.09 Aligned_cols=78 Identities=17% Similarity=0.269 Sum_probs=52.6
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCc-------------------hhHHHHHHHHHhc--CCceEEEecc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNE-------------------TELNQRIQEWKSK--GLQVSGSVCD 70 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~-------------------~~~~~~~~~~~~~--~~~~~~~~~D 70 (263)
+++|+|.|+ |++|..+++.|+..|. ++.++|.+. .+.+...+.+.+. ..++..+..+
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~ 80 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK 80 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence 577888875 6899999999999999 688888753 3444555555543 4456666667
Q ss_pred CCCHHHHHHHHHHHHhhcCCCccEEEeCCC
Q 024752 71 LKIRAQREKLMETVSSQFDGKLNILINNAG 100 (263)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~id~li~~ag 100 (263)
+ +++...+++ ...|++|.+..
T Consensus 81 ~-~~~~~~~~~--------~~~d~vi~~~d 101 (135)
T PF00899_consen 81 I-DEENIEELL--------KDYDIVIDCVD 101 (135)
T ss_dssp C-SHHHHHHHH--------HTSSEEEEESS
T ss_pred c-ccccccccc--------cCCCEEEEecC
Confidence 7 334444444 24688888765
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.051 Score=37.09 Aligned_cols=37 Identities=38% Similarity=0.504 Sum_probs=32.7
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHC-CCeEEEeeC
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAF-GAIVHTCSR 45 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~-g~~V~~~~r 45 (263)
..++++|+++|.|+ |..|+.+++.|.+. +.+|.+.+|
T Consensus 18 ~~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r 55 (86)
T cd05191 18 NKSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR 55 (86)
T ss_pred CCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence 46789999999999 99999999999998 567888777
|
Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al |
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.094 Score=40.99 Aligned_cols=32 Identities=19% Similarity=0.245 Sum_probs=28.0
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCc
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNE 47 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~ 47 (263)
+|+|.|+ ||+|..+++.|++.|. ++.++|.+.
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 3677775 8999999999999999 599999986
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >cd08230 glucose_DH Glucose dehydrogenase | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.11 Score=45.28 Aligned_cols=73 Identities=22% Similarity=0.271 Sum_probs=48.2
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCC---chhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN---ETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
.|++|+|+|+ |++|...++.+...|++|++++|+ +++.+ .+++ .+.. . .|..++ +..+ . ...
T Consensus 172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~-~~~~---~Ga~--~--v~~~~~-~~~~----~-~~~ 236 (355)
T cd08230 172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKAD-IVEE---LGAT--Y--VNSSKT-PVAE----V-KLV 236 (355)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHH---cCCE--E--ecCCcc-chhh----h-hhc
Confidence 6889999986 999999998888899999999984 44333 3322 3333 2 233222 2222 1 112
Q ss_pred CCCccEEEeCCC
Q 024752 89 DGKLNILINNAG 100 (263)
Q Consensus 89 ~~~id~li~~ag 100 (263)
+.+|++|.++|
T Consensus 237 -~~~d~vid~~g 247 (355)
T cd08230 237 -GEFDLIIEATG 247 (355)
T ss_pred -CCCCEEEECcC
Confidence 56999999998
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai |
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.13 Score=44.34 Aligned_cols=118 Identities=14% Similarity=0.165 Sum_probs=70.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-------eEEEeeCCc--hhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHH
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGA-------IVHTCSRNE--TELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 84 (263)
-+|.|+|++|.+|.+++..|+..|. .++++++++ +.++....++...-... . .+..-..+. .+.
T Consensus 4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~--~-~~~~i~~~~---~~~- 76 (323)
T TIGR01759 4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPL--L-AGVVATTDP---EEA- 76 (323)
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccc--c-CCcEEecCh---HHH-
Confidence 3689999999999999999998875 699999965 33555555554321000 0 011000000 111
Q ss_pred HhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC--CceEEEEcccc
Q 024752 85 SSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG--NGNIIFISSVA 152 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~vsS~~ 152 (263)
+ ..-|++|..||... .+ .++-.+.+..|+ .+++.+.+.+.+.. .+.++.+|-..
T Consensus 77 ---~-~daDvVVitAG~~~-k~-----g~tR~dll~~Na----~i~~~i~~~i~~~~~~~~iiivvsNPv 132 (323)
T TIGR01759 77 ---F-KDVDAALLVGAFPR-KP-----GMERADLLSKNG----KIFKEQGKALNKVAKKDVKVLVVGNPA 132 (323)
T ss_pred ---h-CCCCEEEEeCCCCC-CC-----CCcHHHHHHHHH----HHHHHHHHHHHhhCCCCeEEEEeCCcH
Confidence 1 45799999999742 22 233455666666 45555555556552 56777776433
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >cd08290 ETR 2-enoyl thioester reductase (ETR) | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.056 Score=46.66 Aligned_cols=85 Identities=19% Similarity=0.273 Sum_probs=51.1
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
++++++|.|+++++|.++++.....|++|+.+.++.+..++..+.+.+.+....+...+.+ ..+..+. +....++.
T Consensus 146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~---i~~~~~~~ 221 (341)
T cd08290 146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELR-SLLATEL---LKSAPGGR 221 (341)
T ss_pred CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccc-cccHHHH---HHHHcCCC
Confidence 5899999999999999999999999999988887764222222222223332221111110 0022222 22222236
Q ss_pred ccEEEeCCC
Q 024752 92 LNILINNAG 100 (263)
Q Consensus 92 id~li~~ag 100 (263)
+|.++.+.|
T Consensus 222 ~d~vld~~g 230 (341)
T cd08290 222 PKLALNCVG 230 (341)
T ss_pred ceEEEECcC
Confidence 999999888
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f |
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.1 Score=42.99 Aligned_cols=38 Identities=29% Similarity=0.352 Sum_probs=32.1
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCch
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNET 48 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~ 48 (263)
.+++++|+|.|+ ||+|..+++.|+..|. ++.++|.+.-
T Consensus 21 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~v 59 (240)
T TIGR02355 21 ALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTV 59 (240)
T ss_pred HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcc
Confidence 477888999876 5899999999999998 6888888653
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.84 Score=37.77 Aligned_cols=79 Identities=18% Similarity=0.265 Sum_probs=56.7
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc-CC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF-DG 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~ 90 (263)
.|..|||--|+||.|..+++.+-..|+.++.+..+.++.+...+ .|. ....|.+.++ .++++.+.. +.
T Consensus 146 pGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~ake----nG~---~h~I~y~~eD----~v~~V~kiTngK 214 (336)
T KOG1197|consen 146 PGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKE----NGA---EHPIDYSTED----YVDEVKKITNGK 214 (336)
T ss_pred CCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHh----cCC---cceeeccchh----HHHHHHhccCCC
Confidence 48899999999999999999999999999999888877665543 222 1234555443 334444433 34
Q ss_pred CccEEEeCCCC
Q 024752 91 KLNILINNAGT 101 (263)
Q Consensus 91 ~id~li~~ag~ 101 (263)
.+|+++-..|.
T Consensus 215 GVd~vyDsvG~ 225 (336)
T KOG1197|consen 215 GVDAVYDSVGK 225 (336)
T ss_pred Cceeeeccccc
Confidence 59999888885
|
|
| >PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.021 Score=48.10 Aligned_cols=43 Identities=19% Similarity=0.300 Sum_probs=37.6
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCch
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET 48 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~ 48 (263)
....+++||.|+|.|.+.-+|+.++..|.++|++|.++.....
T Consensus 150 ~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~ 192 (285)
T PRK14191 150 HYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTK 192 (285)
T ss_pred HhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcH
Confidence 3567899999999999999999999999999999988755443
|
|
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.022 Score=45.74 Aligned_cols=38 Identities=18% Similarity=0.226 Sum_probs=34.7
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE 47 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~ 47 (263)
++++||.++|.|| |.+|...++.|.+.|++|++++++.
T Consensus 6 l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~ 43 (202)
T PRK06718 6 IDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL 43 (202)
T ss_pred EEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 5799999999998 8899999999999999999998764
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.03 Score=43.93 Aligned_cols=46 Identities=33% Similarity=0.336 Sum_probs=38.7
Q ss_pred ccccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHH
Q 024752 5 REQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN 51 (263)
Q Consensus 5 ~~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~ 51 (263)
.....++.||++.|.|. |.||+++|+.|...|++|+.++|......
T Consensus 28 ~~~~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~ 73 (178)
T PF02826_consen 28 RFPGRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE 73 (178)
T ss_dssp TTTBS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred CCCccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh
Confidence 34556799999999976 89999999999999999999999988654
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.14 Score=44.67 Aligned_cols=114 Identities=13% Similarity=0.125 Sum_probs=72.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchhHHHHHHHHHhcC---CceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKG---LQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
++|.|+|+ |.+|.+++..++..+. .+++++.+++.++....++...- ... .+..+ .+.+ .+
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~-~i~~~-~dy~-------~~---- 103 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRT-KILAS-TDYA-------VT---- 103 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCC-EEEeC-CCHH-------Hh----
Confidence 68999996 9999999999998876 69999999988777776665421 111 11111 1211 11
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-CCceEEEEcccc
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-GNGNIIFISSVA 152 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~ 152 (263)
..-|++|..||.... + ..+. .+.+..|+ .+++.+.+.+.+. ..+.+|+++-..
T Consensus 104 -~daDiVVitAG~~~k-~--g~tR---~dll~~N~----~I~~~i~~~I~~~~p~~ivivvtNPv 157 (350)
T PLN02602 104 -AGSDLCIVTAGARQI-P--GESR---LNLLQRNV----ALFRKIIPELAKYSPDTILLIVSNPV 157 (350)
T ss_pred -CCCCEEEECCCCCCC-c--CCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecCch
Confidence 467999999997532 2 1233 34455555 4555555555554 357777777544
|
|
| >PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.17 Score=37.02 Aligned_cols=91 Identities=23% Similarity=0.386 Sum_probs=58.9
Q ss_pred chHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC-CccEEEeCCCCC
Q 024752 24 GIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG-KLNILINNAGTF 102 (263)
Q Consensus 24 giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~-~id~li~~ag~~ 102 (263)
|||...++.+...|++|+++++++++.+.+. +.+.... .|-++.+ +.+++++.+++ .+|++|.++|.
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~----~~Ga~~~---~~~~~~~----~~~~i~~~~~~~~~d~vid~~g~- 68 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAK----ELGADHV---IDYSDDD----FVEQIRELTGGRGVDVVIDCVGS- 68 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHHH----HTTESEE---EETTTSS----HHHHHHHHTTTSSEEEEEESSSS-
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHHH----hhccccc---ccccccc----cccccccccccccceEEEEecCc-
Confidence 6899999999999999999999988765443 2332222 3333332 44455554433 79999999993
Q ss_pred CCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccc
Q 024752 103 IPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVA 152 (263)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~ 152 (263)
.+.+ +.....+++ +|+++.++...
T Consensus 69 ---------~~~~---------------~~~~~~l~~--~G~~v~vg~~~ 92 (130)
T PF00107_consen 69 ---------GDTL---------------QEAIKLLRP--GGRIVVVGVYG 92 (130)
T ss_dssp ---------HHHH---------------HHHHHHEEE--EEEEEEESSTS
T ss_pred ---------HHHH---------------HHHHHHhcc--CCEEEEEEccC
Confidence 2222 333333444 68999998765
|
1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: |
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.078 Score=46.01 Aligned_cols=40 Identities=28% Similarity=0.333 Sum_probs=36.4
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchh
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE 49 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~ 49 (263)
.+++||++.|.|. |.||+.+|+.|...|++|+.++|+...
T Consensus 146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~ 185 (333)
T PRK13243 146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKP 185 (333)
T ss_pred cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCCh
Confidence 5789999999998 899999999999999999999987654
|
|
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.031 Score=41.25 Aligned_cols=88 Identities=14% Similarity=0.113 Sum_probs=52.5
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEe-eCCchhHHHHHHHHHhc--------CCceEEEeccCCCHHHHHHHHHH
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTC-SRNETELNQRIQEWKSK--------GLQVSGSVCDLKIRAQREKLMET 83 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~ 83 (263)
.-++-|.|+ |-+|.++++.|.+.|+.|..+ +|+.+..++....+... -.....+..-+.| +.+..++++
T Consensus 10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpD-daI~~va~~ 87 (127)
T PF10727_consen 10 RLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPD-DAIAEVAEQ 87 (127)
T ss_dssp --EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-C-CHHHHHHHH
T ss_pred ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEech-HHHHHHHHH
Confidence 346778888 788999999999999988765 57776666655543211 1122333333333 378888888
Q ss_pred HHhh--cCCCccEEEeCCCCCC
Q 024752 84 VSSQ--FDGKLNILINNAGTFI 103 (263)
Q Consensus 84 ~~~~--~~~~id~li~~ag~~~ 103 (263)
+... + .+=.+++|+.|-..
T Consensus 88 La~~~~~-~~g~iVvHtSGa~~ 108 (127)
T PF10727_consen 88 LAQYGAW-RPGQIVVHTSGALG 108 (127)
T ss_dssp HHCC--S--TT-EEEES-SS--
T ss_pred HHHhccC-CCCcEEEECCCCCh
Confidence 8876 3 23368999999643
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.14 Score=44.03 Aligned_cols=116 Identities=16% Similarity=0.086 Sum_probs=73.7
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchhHHHHHHHHHhcC---CceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKG---LQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
..+|.|+|+ |.+|.+++..|+..|. .+++++++.+.++....++.... ........ .+.++
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~~----------- 68 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYSV----------- 68 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHHH-----------
Confidence 457899996 9999999999998876 69999999887777776665431 11111111 12211
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-CCceEEEEccccc
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-GNGNIIFISSVAG 153 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~ 153 (263)
+ ..-|++|..||.... + ..+. .+.+..|. .+++.+.+.+.+. .++.++++|-...
T Consensus 69 ~-~~adivvitaG~~~k-~--g~~R---~dll~~N~----~i~~~~~~~i~~~~p~~~vivvsNP~d 124 (312)
T cd05293 69 T-ANSKVVIVTAGARQN-E--GESR---LDLVQRNV----DIFKGIIPKLVKYSPNAILLVVSNPVD 124 (312)
T ss_pred h-CCCCEEEECCCCCCC-C--CCCH---HHHHHHHH----HHHHHHHHHHHHhCCCcEEEEccChHH
Confidence 1 467999999997533 2 2233 34556665 4455555555554 3577887776543
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.081 Score=42.25 Aligned_cols=37 Identities=22% Similarity=0.351 Sum_probs=30.8
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCc
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNE 47 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~ 47 (263)
.+++++|+|.|+ +|+|.++++.|+..|. ++.++|.+.
T Consensus 18 ~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ 55 (197)
T cd01492 18 RLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRT 55 (197)
T ss_pred HHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCc
Confidence 367889999985 5599999999999998 588888653
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.063 Score=45.93 Aligned_cols=77 Identities=21% Similarity=0.243 Sum_probs=51.3
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
.+++++|.|+++++|..+++.....|++|+.+++++++.+.. .++ +.... .|..+. . .+.+.... ++.
T Consensus 146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~v---~~~~~~-~-~~~~~~~~---~~~ 213 (326)
T cd08289 146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL-KKL---GAKEV---IPREEL-Q-EESIKPLE---KQR 213 (326)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH-HHc---CCCEE---EcchhH-H-HHHHHhhc---cCC
Confidence 368999999999999999999999999999999988765544 332 22111 222222 1 12222221 246
Q ss_pred ccEEEeCCC
Q 024752 92 LNILINNAG 100 (263)
Q Consensus 92 id~li~~ag 100 (263)
+|.++.+.|
T Consensus 214 ~d~vld~~g 222 (326)
T cd08289 214 WAGAVDPVG 222 (326)
T ss_pred cCEEEECCc
Confidence 899998876
|
yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH |
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.17 Score=40.45 Aligned_cols=73 Identities=19% Similarity=0.144 Sum_probs=47.4
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEeeCC-chhHHHHHHHHHhc-----------CCceEEEeccCCCHHHHHHHHHH
Q 024752 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRN-ETELNQRIQEWKSK-----------GLQVSGSVCDLKIRAQREKLMET 83 (263)
Q Consensus 16 vlVtGas~giG~~~a~~l~~~g~~V~~~~r~-~~~~~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~ 83 (263)
....||+|-||.+++++|++.|+.|++..|+ ++..+...+.+... ...+.++.... +.+..++.+
T Consensus 3 ~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP~---~a~~~v~~~ 79 (211)
T COG2085 3 IIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVPF---EAIPDVLAE 79 (211)
T ss_pred EEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEeccH---HHHHhHHHH
Confidence 4566889999999999999999998887554 44455444443321 23344444443 356667777
Q ss_pred HHhhcCCC
Q 024752 84 VSSQFDGK 91 (263)
Q Consensus 84 ~~~~~~~~ 91 (263)
+...++++
T Consensus 80 l~~~~~~K 87 (211)
T COG2085 80 LRDALGGK 87 (211)
T ss_pred HHHHhCCe
Confidence 77666444
|
|
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.24 Score=42.44 Aligned_cols=117 Identities=11% Similarity=0.010 Sum_probs=68.8
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
++.|+|++|.+|.++|..|+..|. .+++++.+ .++....++...-.......+. .+ +++. +.+ ..-
T Consensus 2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~-~~-~~~y-------~~~-~da 69 (310)
T cd01337 2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYL-GP-EELK-------KAL-KGA 69 (310)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEec-CC-CchH-------Hhc-CCC
Confidence 688999999999999999998885 79999998 3333333343321111111010 00 0111 112 468
Q ss_pred cEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccc
Q 024752 93 NILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVA 152 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~ 152 (263)
|++|..||.... + .++-.+.++.|..-...+.+.+.++ ...+.+|++|-+.
T Consensus 70 DivvitaG~~~k-~-----g~tR~dll~~N~~i~~~i~~~i~~~---~p~a~vivvtNPv 120 (310)
T cd01337 70 DVVVIPAGVPRK-P-----GMTRDDLFNINAGIVRDLATAVAKA---CPKALILIISNPV 120 (310)
T ss_pred CEEEEeCCCCCC-C-----CCCHHHHHHHHHHHHHHHHHHHHHh---CCCeEEEEccCch
Confidence 999999997422 1 1234556777765444444444332 3467888888766
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd05290 LDH_3 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.45 Score=40.78 Aligned_cols=113 Identities=17% Similarity=0.142 Sum_probs=72.2
Q ss_pred EEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchhHHHHHHHHHhcC-----CceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 16 ALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKG-----LQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 16 vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
|.|.|+ |.+|..+|..|+..+. .+++++.+++.++....++.... .++..... +.+ .+
T Consensus 2 i~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~---~y~-------~~---- 66 (307)
T cd05290 2 LVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAG---DYD-------DC---- 66 (307)
T ss_pred EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEEC---CHH-------Hh----
Confidence 678888 9999999999998886 69999999888777777666421 12222221 211 11
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEcccc
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVA 152 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~ 152 (263)
..-|++|..||.... + ..+.+ -.+.++.|. .+++.+.+.+.+.. ++.++.+|-..
T Consensus 67 -~~aDivvitaG~~~k-p--g~tr~-R~dll~~N~----~I~~~i~~~i~~~~p~~i~ivvsNPv 122 (307)
T cd05290 67 -ADADIIVITAGPSID-P--GNTDD-RLDLAQTNA----KIIREIMGNITKVTKEAVIILITNPL 122 (307)
T ss_pred -CCCCEEEECCCCCCC-C--CCCch-HHHHHHHHH----HHHHHHHHHHHHhCCCeEEEEecCcH
Confidence 467999999997432 2 12211 234455555 56677777767654 45666666544
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.11 Score=39.01 Aligned_cols=31 Identities=23% Similarity=0.321 Sum_probs=27.1
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-eEEEeeCC
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGA-IVHTCSRN 46 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~ 46 (263)
+++|.|+ ||+|.++++.|+..|. ++.+++.+
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 3788887 8999999999999998 68888876
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.15 Score=43.83 Aligned_cols=117 Identities=11% Similarity=0.019 Sum_probs=68.5
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
+|.|+|++|.+|.++|..|+..+. .++++++++ .+..+.++...-.......+. ..++.. +.+ ..-
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~~~~~~i~~~~--~~~~~~-------~~~-~da 68 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHIPTAASVKGFS--GEEGLE-------NAL-KGA 68 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcCCcCceEEEec--CCCchH-------HHc-CCC
Confidence 478999999999999999998886 699999987 222222222211111111000 000111 112 468
Q ss_pred cEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-CCceEEEEccccc
Q 024752 93 NILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-GNGNIIFISSVAG 153 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~ 153 (263)
|++|..||.... + .++-.+.+..|+- +++.+.+.+.+. ..+.+|++|-+..
T Consensus 69 DivvitaG~~~~-~-----g~~R~dll~~N~~----I~~~i~~~i~~~~p~~iiivvsNPvD 120 (312)
T TIGR01772 69 DVVVIPAGVPRK-P-----GMTRDDLFNVNAG----IVKDLVAAVAESCPKAMILVITNPVN 120 (312)
T ss_pred CEEEEeCCCCCC-C-----CccHHHHHHHhHH----HHHHHHHHHHHhCCCeEEEEecCchh
Confidence 999999997432 1 1223445666765 556666555554 4577888877664
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.078 Score=45.01 Aligned_cols=77 Identities=23% Similarity=0.328 Sum_probs=52.1
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
.+|++++|.|+++++|.++++.....|++|+.+.+++++.+.+ .+ .+.... + .+ .. +..+.+.+. +.
T Consensus 141 ~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~---~g~~~~-~-~~--~~-~~~~~i~~~----~~ 207 (320)
T cd08243 141 QPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL-KE---LGADEV-V-ID--DG-AIAEQLRAA----PG 207 (320)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-Hh---cCCcEE-E-ec--Cc-cHHHHHHHh----CC
Confidence 3578999999999999999999999999999999887665444 32 232211 1 11 11 222222222 35
Q ss_pred CccEEEeCCC
Q 024752 91 KLNILINNAG 100 (263)
Q Consensus 91 ~id~li~~ag 100 (263)
.+|.++++.|
T Consensus 208 ~~d~vl~~~~ 217 (320)
T cd08243 208 GFDKVLELVG 217 (320)
T ss_pred CceEEEECCC
Confidence 7999999887
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >PRK06932 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.18 Score=43.40 Aligned_cols=88 Identities=19% Similarity=0.178 Sum_probs=53.4
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHH----HHHHHHhcCCceEEEeccCCCHHHHHHHHH-H
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQ----RIQEWKSKGLQVSGSVCDLKIRAQREKLME-T 83 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-~ 83 (263)
.+++||++.|.|- |.||+++|+.+...|.+|+..+|....... ..+++- ...++..+.+.++... ..++. +
T Consensus 143 ~~l~gktvgIiG~-G~IG~~va~~l~~fg~~V~~~~~~~~~~~~~~~~~l~ell-~~sDiv~l~~Plt~~T--~~li~~~ 218 (314)
T PRK06932 143 TDVRGSTLGVFGK-GCLGTEVGRLAQALGMKVLYAEHKGASVCREGYTPFEEVL-KQADIVTLHCPLTETT--QNLINAE 218 (314)
T ss_pred cccCCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCcccccccccCCHHHHH-HhCCEEEEcCCCChHH--hcccCHH
Confidence 4789999999997 899999999999999999998875421100 011111 1245666666666432 12211 1
Q ss_pred HHhhcCCCccEEEeCCCCC
Q 024752 84 VSSQFDGKLNILINNAGTF 102 (263)
Q Consensus 84 ~~~~~~~~id~li~~ag~~ 102 (263)
..+. -+.+.++-|.|.+
T Consensus 219 ~l~~--mk~ga~lIN~aRG 235 (314)
T PRK06932 219 TLAL--MKPTAFLINTGRG 235 (314)
T ss_pred HHHh--CCCCeEEEECCCc
Confidence 1111 2566666666644
|
|
| >cd05286 QOR2 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.088 Score=44.43 Aligned_cols=42 Identities=26% Similarity=0.321 Sum_probs=37.0
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHH
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR 53 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~ 53 (263)
++++++|.|+++++|.++++.+...|++|+.+++++++.+.+
T Consensus 136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~ 177 (320)
T cd05286 136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA 177 (320)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence 589999999999999999999999999999998887765544
|
Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone |
| >cd08300 alcohol_DH_class_III class III alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.075 Score=46.65 Aligned_cols=79 Identities=20% Similarity=0.276 Sum_probs=53.2
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCH-HHHHHHHHHHHhhcC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR-AQREKLMETVSSQFD 89 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~ 89 (263)
.|++++|.|+ +++|...++.+...|+ +|+.+++++++.+.. .++ +.... .|..+. ++..+.+.++ .+
T Consensus 186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~l---Ga~~~---i~~~~~~~~~~~~v~~~---~~ 254 (368)
T cd08300 186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKF---GATDC---VNPKDHDKPIQQVLVEM---TD 254 (368)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc---CCCEE---EcccccchHHHHHHHHH---hC
Confidence 4899999975 8999999999999999 699999998876544 332 33211 233322 2333333333 22
Q ss_pred CCccEEEeCCCC
Q 024752 90 GKLNILINNAGT 101 (263)
Q Consensus 90 ~~id~li~~ag~ 101 (263)
+.+|+++.+.|.
T Consensus 255 ~g~d~vid~~g~ 266 (368)
T cd08300 255 GGVDYTFECIGN 266 (368)
T ss_pred CCCcEEEECCCC
Confidence 469999999883
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim |
| >cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.088 Score=45.15 Aligned_cols=79 Identities=16% Similarity=0.234 Sum_probs=52.1
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
.+++.++|.|+++.+|.++++.....|++|+.+.++.+..+.+ +++ +... . .+..++ +..+.+.+. .+.
T Consensus 138 ~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~-v--~~~~~~-~~~~~~~~~---~~~ 206 (329)
T cd08250 138 KSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSL---GCDR-P--INYKTE-DLGEVLKKE---YPK 206 (329)
T ss_pred CCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHc---CCce-E--EeCCCc-cHHHHHHHh---cCC
Confidence 3578999999999999999998889999999999887665444 322 2211 1 122222 222233222 224
Q ss_pred CccEEEeCCC
Q 024752 91 KLNILINNAG 100 (263)
Q Consensus 91 ~id~li~~ag 100 (263)
.+|.++++.|
T Consensus 207 ~vd~v~~~~g 216 (329)
T cd08250 207 GVDVVYESVG 216 (329)
T ss_pred CCeEEEECCc
Confidence 5999999877
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.037 Score=46.62 Aligned_cols=45 Identities=27% Similarity=0.384 Sum_probs=39.4
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETEL 50 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~ 50 (263)
....+++||.++|.|-|.-+|+.++..|.++|++|.++.+....+
T Consensus 152 ~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l 196 (285)
T PRK10792 152 RYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNL 196 (285)
T ss_pred HcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCH
Confidence 345789999999999999999999999999999999988765443
|
|
| >PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.023 Score=47.89 Aligned_cols=43 Identities=26% Similarity=0.360 Sum_probs=37.8
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCch
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET 48 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~ 48 (263)
....+++||+++|.|.|.-+|+.++..|.++|++|.++.+...
T Consensus 151 ~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~ 193 (285)
T PRK14189 151 SIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTR 193 (285)
T ss_pred HcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCC
Confidence 4567899999999999999999999999999999998765543
|
|
| >cd05282 ETR_like 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.083 Score=45.05 Aligned_cols=80 Identities=10% Similarity=0.199 Sum_probs=52.6
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
..+.+++|.|+++++|.++++.+...|++|+.+.++.++.+.. ++ .+... ..+..+.....+ +.+... +.
T Consensus 137 ~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~---~g~~~---~~~~~~~~~~~~-~~~~~~--~~ 206 (323)
T cd05282 137 PPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KA---LGADE---VIDSSPEDLAQR-VKEATG--GA 206 (323)
T ss_pred CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-Hh---cCCCE---EecccchhHHHH-HHHHhc--CC
Confidence 3578999999999999999999999999999998888765443 32 22221 112222222222 222211 23
Q ss_pred CccEEEeCCC
Q 024752 91 KLNILINNAG 100 (263)
Q Consensus 91 ~id~li~~ag 100 (263)
.+|.++.+.|
T Consensus 207 ~~d~vl~~~g 216 (323)
T cd05282 207 GARLALDAVG 216 (323)
T ss_pred CceEEEECCC
Confidence 6999999887
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman |
| >cd05292 LDH_2 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.51 Score=40.49 Aligned_cols=112 Identities=11% Similarity=0.077 Sum_probs=68.7
Q ss_pred EEEEecCCCchHHHHHHHHHHCC--CeEEEeeCCchhHHHHHHHHHhcC---CceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 15 TALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETELNQRIQEWKSKG---LQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
++.|.|+ |.+|..++..|+..| ..|++++++++..+..+.++.... ..... .. .+.+ . +
T Consensus 2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i-~~--~d~~-------~----l- 65 (308)
T cd05292 2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRI-YA--GDYA-------D----C- 65 (308)
T ss_pred EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEE-ee--CCHH-------H----h-
Confidence 4788898 899999999999999 479999999887765555554321 11111 11 1211 1 1
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-CCceEEEEcccc
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-GNGNIIFISSVA 152 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~ 152 (263)
..-|++|.+++..... .++..+.+..|+ .+++.+.+.+.+. .++.+++++...
T Consensus 66 ~~aDiViita~~~~~~------~~~r~dl~~~n~----~i~~~~~~~l~~~~~~giiiv~tNP~ 119 (308)
T cd05292 66 KGADVVVITAGANQKP------GETRLDLLKRNV----AIFKEIIPQILKYAPDAILLVVTNPV 119 (308)
T ss_pred CCCCEEEEccCCCCCC------CCCHHHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecCcH
Confidence 4679999999975321 122344455555 4445555444443 357777776543
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd05295 MDH_like Malate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.069 Score=47.95 Aligned_cols=112 Identities=18% Similarity=0.268 Sum_probs=70.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHC---CC----eEEEeeC--CchhHHHHHHHHHhcC----CceEEEeccCCCHHHHHHH
Q 024752 14 MTALVTGGTKGIGYAVVEELAAF---GA----IVHTCSR--NETELNQRIQEWKSKG----LQVSGSVCDLKIRAQREKL 80 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~---g~----~V~~~~r--~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~ 80 (263)
-+|+||||+|-||.++.-++++- |. .+++++. +.+.++..+-++...- ..+.. ..| +. ..
T Consensus 124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i-~~~--~~----ea 196 (452)
T cd05295 124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISV-TTD--LD----VA 196 (452)
T ss_pred eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEE-EEC--CH----HH
Confidence 46999999999999999999984 42 4777888 5777777777666421 11111 111 11 11
Q ss_pred HHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCC--ceEEEEcc
Q 024752 81 METVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGN--GNIIFISS 150 (263)
Q Consensus 81 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~iv~vsS 150 (263)
+ ...|++|..+|.... + .. +-.+.++.|. .+++...+.+.+... -+|+.+.|
T Consensus 197 -------~-~daDvvIitag~prk-~--G~---~R~DLL~~N~----~Ifk~~g~~I~~~a~~~~~VlVv~t 250 (452)
T cd05295 197 -------F-KDAHVIVLLDDFLIK-E--GE---DLEGCIRSRV----AICQLYGPLIEKNAKEDVKVIVAGR 250 (452)
T ss_pred -------h-CCCCEEEECCCCCCC-c--CC---CHHHHHHHHH----HHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 2 568999999997422 2 12 2345566666 455555555565544 56666664
|
These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.095 Score=46.78 Aligned_cols=86 Identities=8% Similarity=0.126 Sum_probs=52.2
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC---eEEEeeCCchhHHHHHHHHHhc----CCceEEEeccCCCHHHHHHHHHHH
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA---IVHTCSRNETELNQRIQEWKSK----GLQVSGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~---~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~ 84 (263)
.|.+++|.|++|++|..+++.+...|+ +|+++++++++++...+..... +.... ..|..+.++..+.+.++
T Consensus 175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~--~i~~~~~~~~~~~v~~~ 252 (410)
T cd08238 175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELL--YVNPATIDDLHATLMEL 252 (410)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEE--EECCCccccHHHHHHHH
Confidence 368999999999999998887776654 7999999988876554321110 11111 12332222333333322
Q ss_pred HhhcCCCccEEEeCCCC
Q 024752 85 SSQFDGKLNILINNAGT 101 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~ 101 (263)
.. +..+|++|.+.|.
T Consensus 253 t~--g~g~D~vid~~g~ 267 (410)
T cd08238 253 TG--GQGFDDVFVFVPV 267 (410)
T ss_pred hC--CCCCCEEEEcCCC
Confidence 21 2359999998873
|
L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found |
| >PTZ00354 alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.11 Score=44.40 Aligned_cols=80 Identities=15% Similarity=0.290 Sum_probs=51.7
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
++..++|.|+++++|..+++.+...|+.++.+.++++..+.+ .+ .+.... .+..+.+...+.+.+... +..
T Consensus 140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~---~g~~~~---~~~~~~~~~~~~~~~~~~--~~~ 210 (334)
T PTZ00354 140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC-KK---LAAIIL---IRYPDEEGFAPKVKKLTG--EKG 210 (334)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HH---cCCcEE---EecCChhHHHHHHHHHhC--CCC
Confidence 478999999999999999999999999988888887765554 22 232211 122222212222222211 135
Q ss_pred ccEEEeCCC
Q 024752 92 LNILINNAG 100 (263)
Q Consensus 92 id~li~~ag 100 (263)
+|.++++.|
T Consensus 211 ~d~~i~~~~ 219 (334)
T PTZ00354 211 VNLVLDCVG 219 (334)
T ss_pred ceEEEECCc
Confidence 999999886
|
|
| >PLN02586 probable cinnamyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.081 Score=46.34 Aligned_cols=74 Identities=20% Similarity=0.258 Sum_probs=49.1
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
.|++|+|.|+ |++|..+++.+...|++|++++.+.++..+..+++ +.... .|..+.+. +.+.. +.
T Consensus 183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~---Ga~~v---i~~~~~~~-------~~~~~-~~ 247 (360)
T PLN02586 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRL---GADSF---LVSTDPEK-------MKAAI-GT 247 (360)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhC---CCcEE---EcCCCHHH-------HHhhc-CC
Confidence 5889999775 89999999998899999988887776554444332 32211 12233222 22222 35
Q ss_pred ccEEEeCCC
Q 024752 92 LNILINNAG 100 (263)
Q Consensus 92 id~li~~ag 100 (263)
+|++|.+.|
T Consensus 248 ~D~vid~~g 256 (360)
T PLN02586 248 MDYIIDTVS 256 (360)
T ss_pred CCEEEECCC
Confidence 899999988
|
|
| >PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.048 Score=45.94 Aligned_cols=44 Identities=23% Similarity=0.298 Sum_probs=38.2
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchh
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE 49 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~ 49 (263)
....+++||.++|.|.|.-+|+.++..|.++|++|.++......
T Consensus 151 ~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~ 194 (284)
T PRK14190 151 EYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKN 194 (284)
T ss_pred HcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchh
Confidence 34568999999999999999999999999999999987655443
|
|
| >COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.099 Score=44.65 Aligned_cols=115 Identities=12% Similarity=0.081 Sum_probs=70.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchhHHHHHHHHHhcCC---ceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKGL---QVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
++|.|+|+ |++|.+++..|+.++. .+++++++++.++-...++..... .-..+..| .+.+ .+
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y~-------~~---- 67 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDYE-------DL---- 67 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CChh-------hh----
Confidence 46889999 9999999999988764 799999997776666555543211 00112222 1111 11
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEcccc
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVA 152 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~ 152 (263)
..-|+++-.||...-+. ++ -.+.++.|.. +.+.+.+.+.+.. ++.++.++-..
T Consensus 68 -~~aDiVvitAG~prKpG---mt---R~DLl~~Na~----I~~~i~~~i~~~~~d~ivlVvtNPv 121 (313)
T COG0039 68 -KGADIVVITAGVPRKPG---MT---RLDLLEKNAK----IVKDIAKAIAKYAPDAIVLVVTNPV 121 (313)
T ss_pred -cCCCEEEEeCCCCCCCC---CC---HHHHHHhhHH----HHHHHHHHHHhhCCCeEEEEecCcH
Confidence 46899999998753221 23 3455667764 4444444445443 46677666544
|
|
| >PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.16 Score=44.79 Aligned_cols=68 Identities=16% Similarity=0.201 Sum_probs=47.5
Q ss_pred ccccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHH-----HHHHHHhcCCceEEEeccCCCH
Q 024752 5 REQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQ-----RIQEWKSKGLQVSGSVCDLKIR 74 (263)
Q Consensus 5 ~~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~~~~~~D~~~~ 74 (263)
++..++++||++.|.|. |.||+.+++.|...|.+|+..++....... -.+++- ...++..+.+-++..
T Consensus 108 r~~g~~L~gktvGIIG~-G~IG~~vA~~l~a~G~~V~~~dp~~~~~~~~~~~~~L~ell-~~sDiI~lh~PLt~~ 180 (378)
T PRK15438 108 ERDGFSLHDRTVGIVGV-GNVGRRLQARLEALGIKTLLCDPPRADRGDEGDFRSLDELV-QEADILTFHTPLFKD 180 (378)
T ss_pred ccCCCCcCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCcccccccccccCCHHHHH-hhCCEEEEeCCCCCC
Confidence 34567899999999998 899999999999999999999864321110 011111 124566666777764
|
|
| >TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.28 Score=43.63 Aligned_cols=116 Identities=17% Similarity=0.201 Sum_probs=63.4
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEE-eeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHT-CSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
.|++++|. ++++||..+++.+...|++++. +++++++++.. +++ +.. . .+.+...+..+.+.++.. +.
T Consensus 185 ~g~~VlV~-G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a-~~~---Ga~--~--v~~~~~~~~~~~v~~~~~--~~ 253 (393)
T TIGR02819 185 PGSTVYIA-GAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQA-RSF---GCE--T--VDLSKDATLPEQIEQILG--EP 253 (393)
T ss_pred CCCEEEEE-CCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHH-HHc---CCe--E--EecCCcccHHHHHHHHcC--CC
Confidence 48899994 5689999999988889997544 45665444333 322 332 1 232222223232322221 13
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccc
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSV 151 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~ 151 (263)
.+|++|.++|....+...+. +. ...-..++..+..+++ +|++++++..
T Consensus 254 g~Dvvid~~G~~~~~~~~~~--------~~---~~~~~~~~~~~~~~~~--~G~i~~~G~~ 301 (393)
T TIGR02819 254 EVDCAVDCVGFEARGHGHDG--------KK---EAPATVLNSLMEVTRV--GGAIGIPGLY 301 (393)
T ss_pred CCcEEEECCCCccccccccc--------cc---cchHHHHHHHHHHhhC--CCEEEEeeec
Confidence 59999999996432111000 00 0222233444444444 6999999864
|
Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent. |
| >PLN02178 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.1 Score=46.06 Aligned_cols=75 Identities=21% Similarity=0.271 Sum_probs=49.7
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
.|++++|.|+ |++|..+++.....|++|++++++.++..+.++++ +.... .|..+.+. +.+.. +.
T Consensus 178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~l---Ga~~~---i~~~~~~~-------v~~~~-~~ 242 (375)
T PLN02178 178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRL---GADSF---LVTTDSQK-------MKEAV-GT 242 (375)
T ss_pred CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhC---CCcEE---EcCcCHHH-------HHHhh-CC
Confidence 5899999986 89999999998899999999888765543343332 33211 12223222 22222 36
Q ss_pred ccEEEeCCCC
Q 024752 92 LNILINNAGT 101 (263)
Q Consensus 92 id~li~~ag~ 101 (263)
+|+++.++|.
T Consensus 243 ~D~vid~~G~ 252 (375)
T PLN02178 243 MDFIIDTVSA 252 (375)
T ss_pred CcEEEECCCc
Confidence 8999999883
|
|
| >PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.1 Score=46.24 Aligned_cols=77 Identities=16% Similarity=0.193 Sum_probs=52.9
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
.++.+.|+++|+|++ .+|+.+++.+.+.|++|+.++.++......... ..+..|..|.+.+.+++++
T Consensus 7 ~~~~~~~~ilIiG~g-~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~ad--------~~~~~~~~d~~~l~~~~~~---- 73 (395)
T PRK09288 7 PLSPSATRVMLLGSG-ELGKEVAIEAQRLGVEVIAVDRYANAPAMQVAH--------RSHVIDMLDGDALRAVIER---- 73 (395)
T ss_pred CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCCchHHhhh--------heEECCCCCHHHHHHHHHH----
Confidence 345567799999876 589999999999999999999887542211110 1345677777766666542
Q ss_pred cCCCccEEEeCC
Q 024752 88 FDGKLNILINNA 99 (263)
Q Consensus 88 ~~~~id~li~~a 99 (263)
.++|.++...
T Consensus 74 --~~id~vi~~~ 83 (395)
T PRK09288 74 --EKPDYIVPEI 83 (395)
T ss_pred --hCCCEEEEee
Confidence 3678887643
|
|
| >PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.045 Score=46.13 Aligned_cols=44 Identities=20% Similarity=0.313 Sum_probs=38.5
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchh
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE 49 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~ 49 (263)
....+++||.++|.|-|.-+|+.++..|.++|++|.++......
T Consensus 157 ~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~ 200 (287)
T PRK14176 157 EYGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDD 200 (287)
T ss_pred HcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCC
Confidence 35678999999999999999999999999999999988765443
|
|
| >cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.1 Score=44.98 Aligned_cols=78 Identities=21% Similarity=0.245 Sum_probs=52.0
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc-CC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF-DG 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~ 90 (263)
++.+++|.|+++++|.++++.+.+.|++|+.+.+++++.+.+ +++ +.+.. .+..+.+...++ .+.. ++
T Consensus 165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~v---~~~~~~~~~~~~----~~~~~~~ 233 (341)
T cd08297 165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA-KEL---GADAF---VDFKKSDDVEAV----KELTGGG 233 (341)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHc---CCcEE---EcCCCccHHHHH----HHHhcCC
Confidence 478999999999999999999999999999999998765543 332 22211 222222222222 2221 24
Q ss_pred CccEEEeCCC
Q 024752 91 KLNILINNAG 100 (263)
Q Consensus 91 ~id~li~~ag 100 (263)
.+|.++++.+
T Consensus 234 ~vd~vl~~~~ 243 (341)
T cd08297 234 GAHAVVVTAV 243 (341)
T ss_pred CCCEEEEcCC
Confidence 6999998665
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha |
| >PLN02740 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.11 Score=45.77 Aligned_cols=79 Identities=20% Similarity=0.232 Sum_probs=52.3
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCH-HHHHHHHHHHHhhcC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR-AQREKLMETVSSQFD 89 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~ 89 (263)
.|++|+|.|+ |++|..+++.+...|+ +|+.+++++++.+.. ++ .+... + .|..++ ++..+.+.++ .+
T Consensus 198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a-~~---~Ga~~-~--i~~~~~~~~~~~~v~~~---~~ 266 (381)
T PLN02740 198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKG-KE---MGITD-F--INPKDSDKPVHERIREM---TG 266 (381)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH-HH---cCCcE-E--EecccccchHHHHHHHH---hC
Confidence 4889999985 9999999999889999 699999988776544 22 23321 1 233322 1233333322 22
Q ss_pred CCccEEEeCCCC
Q 024752 90 GKLNILINNAGT 101 (263)
Q Consensus 90 ~~id~li~~ag~ 101 (263)
+.+|+++.++|.
T Consensus 267 ~g~dvvid~~G~ 278 (381)
T PLN02740 267 GGVDYSFECAGN 278 (381)
T ss_pred CCCCEEEECCCC
Confidence 369999999984
|
|
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.12 Score=43.74 Aligned_cols=40 Identities=23% Similarity=0.265 Sum_probs=33.5
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhH
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETEL 50 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~ 50 (263)
.+++.+|+|.|+ ||+|..+++.|+..|. ++.++|.+.-..
T Consensus 24 kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~ 64 (287)
T PRK08223 24 RLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFEL 64 (287)
T ss_pred HHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcch
Confidence 377889999986 5899999999999998 788888875433
|
|
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.17 Score=40.40 Aligned_cols=36 Identities=17% Similarity=0.340 Sum_probs=31.0
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCc
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNE 47 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~ 47 (263)
+++.+|+|.|+++ +|.++++.|+..|. ++.++|.+.
T Consensus 17 L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ 53 (198)
T cd01485 17 LRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRL 53 (198)
T ss_pred HhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCc
Confidence 6678899998776 99999999999998 588888764
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.15 Score=44.90 Aligned_cols=36 Identities=25% Similarity=0.467 Sum_probs=31.7
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRN 46 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~ 46 (263)
.+++++|+|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus 38 ~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 38 RLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred HhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 377889999987 6899999999999998 79999986
|
|
| >COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.63 Score=38.11 Aligned_cols=138 Identities=18% Similarity=0.195 Sum_probs=83.4
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCch-------------------hHHHHHHHHHhcCCceEEEec-
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNET-------------------ELNQRIQEWKSKGLQVSGSVC- 69 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~- 69 (263)
++...|+|.|. ||.|.-.++.|++.|. ++.+++-+.- +.+-..+.+......+.....
T Consensus 28 l~~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~ 106 (263)
T COG1179 28 LKQAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIN 106 (263)
T ss_pred HhhCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehH
Confidence 56778888886 6789999999999998 6888886542 222223333333444554443
Q ss_pred cCCCHHHHHHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEc
Q 024752 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFIS 149 (263)
Q Consensus 70 D~~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vs 149 (263)
|+-+++.+++++. ..+|++|-+.-.. ..=..++..+ ++++ +-++|
T Consensus 107 ~f~t~en~~~~~~-------~~~DyvIDaiD~v---------------------~~Kv~Li~~c----~~~k---i~vIs 151 (263)
T COG1179 107 DFITEENLEDLLS-------KGFDYVIDAIDSV---------------------RAKVALIAYC----RRNK---IPVIS 151 (263)
T ss_pred hhhCHhHHHHHhc-------CCCCEEEEchhhh---------------------HHHHHHHHHH----HHcC---CCEEe
Confidence 4445666666553 4688887765421 1112333333 3432 23444
Q ss_pred cccc--cccCCCCcchhhHHHHHHHHHHHHHHHHccC
Q 024752 150 SVAG--VIAIPMCSIYASSKVAMNQLTKNLACEWAKD 184 (263)
Q Consensus 150 S~~~--~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~ 184 (263)
|+.+ .........-..+|--.+.|++.++.+|.++
T Consensus 152 s~Gag~k~DPTri~v~DiskT~~DPLa~~vR~~LRk~ 188 (263)
T COG1179 152 SMGAGGKLDPTRIQVADISKTIQDPLAAKVRRKLRKR 188 (263)
T ss_pred eccccCCCCCceEEeeechhhccCcHHHHHHHHHHHh
Confidence 4333 2222234456788888899999999999876
|
|
| >PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.21 Score=45.86 Aligned_cols=127 Identities=15% Similarity=0.100 Sum_probs=70.4
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
+++++|.++|.|. |+.|.++|+.|.++|+.|.+.+...... ..+.+...+..+.+...+.. + ..+
T Consensus 3 ~~~~~~~i~v~G~-G~sG~s~a~~L~~~G~~v~~~D~~~~~~--~~~~L~~~~~~~~~~~g~~~-~----~~~------- 67 (498)
T PRK02006 3 GDLQGPMVLVLGL-GESGLAMARWCARHGARLRVADTREAPP--NLAALRAELPDAEFVGGPFD-P----ALL------- 67 (498)
T ss_pred cccCCCEEEEEee-cHhHHHHHHHHHHCCCEEEEEcCCCCch--hHHHHHhhcCCcEEEeCCCc-h----hHh-------
Confidence 3467899999995 4689999999999999999999765321 12223333222222222111 1 111
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHH--HHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEcccccc
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFST--VMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGV 154 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~--~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~ 154 (263)
...|++|...|+..... .....+.+ ...+.+.+..-++..+++.+..+. ..++|-|+...|.
T Consensus 68 -~~~d~vv~sp~I~~~~~---~~~~~~~~a~~~~i~v~~~~e~~~~~~~~l~~~~~~~~~I~VTGTnGK 132 (498)
T PRK02006 68 -DGVDLVALSPGLSPLEA---ALAPLVAAARERGIPVWGEIELFAQALAALGASGYAPKVLAITGTNGK 132 (498)
T ss_pred -cCCCEEEECCCCCCccc---ccCHHHHHHHHCCCcEEEHHHHHHHHHhhhccccCCCCEEEEECCCcH
Confidence 24699999999753210 00112222 235666766666555544432221 2357777665553
|
|
| >PRK12550 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.044 Score=46.11 Aligned_cols=44 Identities=20% Similarity=0.223 Sum_probs=38.0
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHH
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEW 57 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~ 57 (263)
+|+++|.|+ ||-+++++..|++.|+ +|.++.|+.++.+++++.+
T Consensus 122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~ 166 (272)
T PRK12550 122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY 166 (272)
T ss_pred CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence 578999996 8889999999999998 5999999998888776653
|
|
| >PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.032 Score=46.80 Aligned_cols=43 Identities=23% Similarity=0.283 Sum_probs=37.5
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCch
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET 48 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~ 48 (263)
....+++||.++|.|.|.-+|+.++..|.++|++|.++.....
T Consensus 150 ~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~ 192 (281)
T PRK14183 150 EYEIDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTK 192 (281)
T ss_pred HcCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCc
Confidence 4567899999999999999999999999999999987655443
|
|
| >PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.13 Score=43.97 Aligned_cols=79 Identities=11% Similarity=0.191 Sum_probs=51.4
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
.|.+++|.|+++.+|..+++.+...|++|+.+.++.++.+.+ .+ .+.. ..+ +..+. +..+.+.+... +..
T Consensus 140 ~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~-~~---~g~~-~~~--~~~~~-~~~~~~~~~~~--~~~ 209 (327)
T PRK10754 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRA-KK---AGAW-QVI--NYREE-NIVERVKEITG--GKK 209 (327)
T ss_pred CCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HH---CCCC-EEE--cCCCC-cHHHHHHHHcC--CCC
Confidence 578999999999999999998889999999998887765433 22 2322 122 22221 22222222221 235
Q ss_pred ccEEEeCCC
Q 024752 92 LNILINNAG 100 (263)
Q Consensus 92 id~li~~ag 100 (263)
+|+++.+.|
T Consensus 210 ~d~vl~~~~ 218 (327)
T PRK10754 210 VRVVYDSVG 218 (327)
T ss_pred eEEEEECCc
Confidence 899998877
|
|
| >PLN03139 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.16 Score=44.91 Aligned_cols=39 Identities=23% Similarity=0.344 Sum_probs=35.0
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE 47 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~ 47 (263)
..+++||++.|.| .|.||+.+++.|...|++|+.++|..
T Consensus 194 ~~~L~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~ 232 (386)
T PLN03139 194 AYDLEGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLK 232 (386)
T ss_pred CcCCCCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCC
Confidence 3579999999999 57799999999999999999999874
|
|
| >PRK08410 2-hydroxyacid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.21 Score=42.92 Aligned_cols=38 Identities=32% Similarity=0.246 Sum_probs=34.6
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE 47 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~ 47 (263)
.++.||++.|.|- |.||+++|+.+...|.+|+.++|..
T Consensus 141 ~~L~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~~ 178 (311)
T PRK08410 141 GEIKGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTSG 178 (311)
T ss_pred cccCCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCCc
Confidence 4799999999997 8899999999999999999999854
|
|
| >PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.052 Score=45.78 Aligned_cols=45 Identities=20% Similarity=0.225 Sum_probs=38.8
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETEL 50 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~ 50 (263)
....+++||.++|.|.|.-+|+.++..|.++|++|.++.+....+
T Consensus 148 ~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l 192 (287)
T PRK14173 148 HYGIPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDL 192 (287)
T ss_pred HcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCH
Confidence 345689999999999999999999999999999999877655443
|
|
| >PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.05 Score=45.78 Aligned_cols=46 Identities=24% Similarity=0.344 Sum_probs=39.8
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN 51 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~ 51 (263)
....+++||.++|.|-|.-+|+.++..|.++|++|..+......+.
T Consensus 152 ~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~ 197 (284)
T PRK14177 152 EYGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLP 197 (284)
T ss_pred HhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence 3567899999999999999999999999999999999876554443
|
|
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.047 Score=48.74 Aligned_cols=43 Identities=19% Similarity=0.206 Sum_probs=38.0
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHH
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN 51 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~ 51 (263)
...+.||+++|.|. |.||+.+++.|...|++|+++++++.+..
T Consensus 207 ~~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~ 249 (425)
T PRK05476 207 NVLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICAL 249 (425)
T ss_pred cCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhH
Confidence 44578999999997 68999999999999999999999987653
|
|
| >cd00300 LDH_like L-lactate dehydrogenase-like enzymes | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.36 Score=41.26 Aligned_cols=113 Identities=16% Similarity=0.072 Sum_probs=70.7
Q ss_pred EEEecCCCchHHHHHHHHHHCC--CeEEEeeCCchhHHHHHHHHHhcCCc---eEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 16 ALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETELNQRIQEWKSKGLQ---VSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 16 vlVtGas~giG~~~a~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
+.|.|+ |++|.+++..++..| ..+++++++++.++....++...-.. .....+ .+. +.+ .
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~~-------~~l-----~ 65 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GDY-------ADA-----A 65 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CCH-------HHh-----C
Confidence 357787 679999999999998 57999999998888887777653211 111111 111 111 4
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-CCceEEEEccccc
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-GNGNIIFISSVAG 153 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~ 153 (263)
.-|++|.++|..... ..+ -...+..|+ .+++.+.+.+++. .++.++++|-...
T Consensus 66 ~aDiVIitag~p~~~---~~~---R~~l~~~n~----~i~~~~~~~i~~~~p~~~viv~sNP~d 119 (300)
T cd00300 66 DADIVVITAGAPRKP---GET---RLDLINRNA----PILRSVITNLKKYGPDAIILVVSNPVD 119 (300)
T ss_pred CCCEEEEcCCCCCCC---CCC---HHHHHHHHH----HHHHHHHHHHHHhCCCeEEEEccChHH
Confidence 679999999974321 122 234455555 4455555555554 4677887775543
|
Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot |
| >PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.037 Score=46.40 Aligned_cols=44 Identities=20% Similarity=0.314 Sum_probs=38.4
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchh
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE 49 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~ 49 (263)
....+++||.++|.|-|.-+|+.++..|.++|++|..+.+....
T Consensus 151 ~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~ 194 (278)
T PRK14172 151 SLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKN 194 (278)
T ss_pred HhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCC
Confidence 34568999999999999999999999999999999988765443
|
|
| >PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.058 Score=45.36 Aligned_cols=45 Identities=33% Similarity=0.405 Sum_probs=39.0
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETEL 50 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~ 50 (263)
....+++||.++|.|.|.-+|+.++..|.++|++|..+.+....+
T Consensus 151 ~y~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl 195 (282)
T PRK14180 151 EYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDL 195 (282)
T ss_pred HhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCH
Confidence 345689999999999999999999999999999999887655433
|
|
| >PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.043 Score=41.56 Aligned_cols=41 Identities=20% Similarity=0.190 Sum_probs=34.1
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHH
Q 024752 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWK 58 (263)
Q Consensus 16 vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~ 58 (263)
|+.+|+.+-+|+++|..|.++|.+|++. +.+.-+.+..++.
T Consensus 1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~~ 41 (164)
T PF12076_consen 1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEAP 41 (164)
T ss_pred CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHcC
Confidence 5889999999999999999999999998 5555666665543
|
This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases []. |
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.18 Score=40.58 Aligned_cols=59 Identities=17% Similarity=0.212 Sum_probs=41.4
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCC
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLK 72 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~ 72 (263)
++++||.++|.||+ .+|..-++.|++.|++|++++.+... ...++.+.+ ++.++.-+..
T Consensus 5 l~l~gk~vlVvGgG-~va~rk~~~Ll~~ga~VtVvsp~~~~---~l~~l~~~~-~i~~~~~~~~ 63 (205)
T TIGR01470 5 ANLEGRAVLVVGGG-DVALRKARLLLKAGAQLRVIAEELES---ELTLLAEQG-GITWLARCFD 63 (205)
T ss_pred EEcCCCeEEEECcC-HHHHHHHHHHHHCCCEEEEEcCCCCH---HHHHHHHcC-CEEEEeCCCC
Confidence 56899999999974 56899999999999999999876542 122222222 4555555544
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.08 Score=49.31 Aligned_cols=72 Identities=14% Similarity=0.102 Sum_probs=52.7
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCccE
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNI 94 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 94 (263)
.++|.| .|-+|+++++.|.++|.+|+++++|++..++..+ . ....+..|.++++..+++-- .+.|.
T Consensus 419 hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~----~--g~~~i~GD~~~~~~L~~a~i-------~~a~~ 484 (558)
T PRK10669 419 HALLVG-YGRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE----R--GIRAVLGNAANEEIMQLAHL-------DCARW 484 (558)
T ss_pred CEEEEC-CChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----C--CCeEEEcCCCCHHHHHhcCc-------cccCE
Confidence 445555 4567999999999999999999999987665542 2 35678899999887766421 35677
Q ss_pred EEeCCC
Q 024752 95 LINNAG 100 (263)
Q Consensus 95 li~~ag 100 (263)
++...+
T Consensus 485 viv~~~ 490 (558)
T PRK10669 485 LLLTIP 490 (558)
T ss_pred EEEEcC
Confidence 765544
|
|
| >cd08301 alcohol_DH_plants Plant alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.18 Score=44.24 Aligned_cols=79 Identities=20% Similarity=0.279 Sum_probs=52.2
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCH-HHHHHHHHHHHhhcC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR-AQREKLMETVSSQFD 89 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~ 89 (263)
+|++|+|.|+ +++|...++.+...|+ +|+.+++++++.+.+ ++ .+.... .|..+. +++.+.+.++. +
T Consensus 187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~---~Ga~~~---i~~~~~~~~~~~~v~~~~---~ 255 (369)
T cd08301 187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KK---FGVTEF---VNPKDHDKPVQEVIAEMT---G 255 (369)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HH---cCCceE---EcccccchhHHHHHHHHh---C
Confidence 5899999985 8999999998888999 799999988765543 33 233211 122221 23333333332 2
Q ss_pred CCccEEEeCCCC
Q 024752 90 GKLNILINNAGT 101 (263)
Q Consensus 90 ~~id~li~~ag~ 101 (263)
+.+|+++.+.|.
T Consensus 256 ~~~d~vid~~G~ 267 (369)
T cd08301 256 GGVDYSFECTGN 267 (369)
T ss_pred CCCCEEEECCCC
Confidence 469999999873
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 263 | ||||
| 1ae1_A | 273 | Tropinone Reductase-I Complex With Nadp Length = 27 | 5e-88 | ||
| 1xq1_A | 266 | X-Ray Structure Of Putative Tropinone Reducatse Fro | 3e-87 | ||
| 1ipe_A | 259 | Tropinone Reductase-Ii Complexed With Nadph Length | 3e-78 | ||
| 2ae2_A | 260 | Tropinone Reductase-Ii Complexed With Nadp+ And Pse | 3e-78 | ||
| 1vl8_A | 267 | Crystal Structure Of Gluconate 5-dehydrogenase (tm0 | 8e-34 | ||
| 4b79_A | 242 | The Aeropath Project And Pseudomonas Aeruginosa Hig | 4e-32 | ||
| 2hq1_A | 247 | Crystal Structure Of Orf 1438 A Putative GlucoseRIB | 5e-32 | ||
| 3o4r_A | 261 | Crystal Structure Of Human DehydrogenaseREDUCTASE ( | 1e-28 | ||
| 3cxr_A | 291 | Crystal Structure Of Gluconate 5-Dehydrogase From S | 1e-27 | ||
| 2zat_A | 260 | Crystal Structure Of A Mammalian Reductase Length = | 2e-27 | ||
| 1x1e_A | 239 | Crystal Structure Of Tt0495 Protein From Thermus Th | 1e-25 | ||
| 4g81_D | 255 | Crystal Structure Of A Hexonate Dehydrogenase Ortho | 3e-25 | ||
| 4ibo_A | 271 | Crystal Structure Of A Putative Gluconate Dehydroge | 4e-25 | ||
| 3ftp_A | 270 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 1e-24 | ||
| 3csd_B | 281 | Actinorhodin Polyketide Ketoreductase Mutant P94l B | 1e-24 | ||
| 2rhr_B | 277 | P94l Actinorhodin Ketordeuctase Mutant, With Nadph | 1e-24 | ||
| 2d1y_A | 256 | Crystal Structure Of Tt0321 From Thermus Thermophil | 1e-24 | ||
| 3gaf_A | 256 | 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De | 1e-24 | ||
| 3sj7_A | 252 | Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F | 2e-24 | ||
| 1ahi_A | 255 | 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With | 3e-24 | ||
| 1w4z_A | 281 | Structure Of Actinorhodin Polyketide (Actiii) Reduc | 3e-24 | ||
| 1x7g_A | 261 | Actinorhodin Polyketide Ketoreductase, Act Kr, With | 4e-24 | ||
| 2rh4_A | 277 | Actinorhodin Ketoreductase, Actkr, With Nadph And I | 4e-24 | ||
| 4dbz_A | 281 | Crystal Structure Of V151l Actinorhodin Polyketide | 4e-24 | ||
| 4dc1_A | 281 | Crystal Structure Of Y202f Actinorhodin Polyketide | 4e-24 | ||
| 2b4q_A | 276 | Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex | 7e-24 | ||
| 1yxm_A | 303 | Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa | 7e-24 | ||
| 4dc0_A | 281 | Crystal Structure Of F189w Actinorhodin Polyketide | 8e-24 | ||
| 2uvd_A | 246 | The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier | 2e-23 | ||
| 1spx_A | 278 | Crystal Structure Of Glucose Dehydrogenase Of Caeno | 2e-23 | ||
| 1rwb_A | 261 | Cooperative Effect Of Two Surface Amino Acid Mutati | 2e-23 | ||
| 1zjy_A | 251 | Structure Of R-Specific Alcohol Dehydrogenase (Muta | 2e-23 | ||
| 3tzh_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 3e-23 | ||
| 1nxq_A | 251 | Crystal Structure Of R-Alcohol Dehydrogenase (Radh) | 3e-23 | ||
| 4afn_A | 269 | Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote | 3e-23 | ||
| 3rsh_A | 251 | Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc | 3e-23 | ||
| 3enn_A | 249 | 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN | 4e-23 | ||
| 3emk_A | 246 | 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN | 4e-23 | ||
| 1g6k_A | 261 | Crystal Structure Of Glucose Dehydrogenase Mutant E | 5e-23 | ||
| 2wdz_A | 254 | Crystal Structure Of The Short Chain Dehydrogenase | 5e-23 | ||
| 1gee_A | 261 | Crystal Structure Of Glucose Dehydrogenase Mutant Q | 6e-23 | ||
| 1gco_A | 261 | Crystal Structure Of Glucose Dehydrogenase Complexe | 6e-23 | ||
| 1i01_A | 244 | Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr | 7e-23 | ||
| 3tzc_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 1e-22 | ||
| 3awd_A | 260 | Crystal Structure Of Gox2181 Length = 260 | 1e-22 | ||
| 3r1i_A | 276 | Crystal Structure Of A Short-Chain Type Dehydrogena | 1e-22 | ||
| 3vtz_A | 269 | Structure Of Thermoplasma Volcanium Aldohexose Dehy | 2e-22 | ||
| 3tzk_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 2e-22 | ||
| 1q7c_A | 244 | The Structure Of Betaketoacyl-[acp] Reductase Y151f | 2e-22 | ||
| 3aus_A | 269 | Crystal Structure Of Bacillus Megaterium Glucose De | 2e-22 | ||
| 3ay7_A | 269 | Crystal Structure Of Bacillus Megaterium Glucose De | 2e-22 | ||
| 3ay6_A | 269 | Crystal Structure Of Bacillus Megaterium Glucose De | 2e-22 | ||
| 3uf0_A | 273 | Crystal Structure Of A Putative Nad(P) Dependent Gl | 2e-22 | ||
| 3u09_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 2e-22 | ||
| 3osu_A | 246 | Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro | 2e-22 | ||
| 3gk3_A | 269 | Crystal Structure Of Acetoacetyl-Coa Reductase From | 4e-22 | ||
| 3sju_A | 279 | Hedamycin Polyketide Ketoreductase Bound To Nadph L | 5e-22 | ||
| 2pnf_A | 248 | Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl- | 7e-22 | ||
| 1nff_A | 260 | Crystal Structure Of Rv2002 Gene Product From Mycob | 7e-22 | ||
| 3pk0_A | 262 | Crystal Structure Of Short-Chain DehydrogenaseREDUC | 1e-21 | ||
| 2c07_A | 285 | Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng | 1e-21 | ||
| 1cyd_A | 244 | Carbonyl Reductase Complexed With Nadph And 2-Propa | 3e-21 | ||
| 1wmb_A | 260 | Crystal Structure Of Nad Dependent D-3-Hydroxybutyl | 4e-21 | ||
| 3op4_A | 248 | Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr | 4e-21 | ||
| 2ztm_A | 260 | T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L | 1e-20 | ||
| 2ztu_A | 260 | T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C | 2e-20 | ||
| 1nfr_A | 260 | Rv2002 Gene Product From Mycobacterium Tuberculosis | 2e-20 | ||
| 4dqx_A | 277 | Crystal Structure Of A Short Chain Dehydrogenase Fr | 2e-20 | ||
| 2hsd_A | 253 | The Refined Three-Dimensional Structure Of 3alpha,2 | 2e-20 | ||
| 1uzl_A | 247 | Maba From Mycobacterium Tuberculosis Length = 247 | 2e-20 | ||
| 3rih_A | 293 | Crystal Structure Of A Putative Short Chain Dehydro | 3e-20 | ||
| 1xkq_A | 280 | Crystal Structure Of Short-Chain DehydrogenaseREDUC | 4e-20 | ||
| 3lyl_A | 247 | Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas | 4e-20 | ||
| 2ph3_A | 245 | Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei | 5e-20 | ||
| 2ntn_A | 267 | Crystal Structure Of Maba-c60v/g139a/s144l Length = | 6e-20 | ||
| 1uzm_A | 247 | Maba From Mycobacterium Tuberculosis Length = 247 | 7e-20 | ||
| 3ctm_A | 279 | Crystal Structure Of A Carbonyl Reductase From Cand | 1e-19 | ||
| 4eso_A | 255 | Crystal Structure Of A Putative Oxidoreductase Prot | 1e-19 | ||
| 3vc7_A | 254 | Crystal Structure Of A Putative Oxidoreductase From | 1e-19 | ||
| 3ai1_A | 263 | The Crystal Structure Of L-Sorbose Reductase From G | 1e-19 | ||
| 3grp_A | 266 | 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl- | 1e-19 | ||
| 1iy8_A | 267 | Crystal Structure Of Levodione Reductase Length = 2 | 1e-19 | ||
| 3tzq_B | 271 | Crystal Structure Of A Short-Chain Type Dehydrogena | 1e-19 | ||
| 3f9i_A | 249 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 1e-19 | ||
| 4fn4_A | 254 | Short-chain Nad(h)-dependent Dehydrogenase/reductas | 1e-19 | ||
| 3pgx_A | 280 | Crystal Structure Of A Putative Carveol Dehydrogena | 1e-19 | ||
| 4iin_A | 271 | Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car | 2e-19 | ||
| 3i3o_A | 291 | 2.06 Angstrom Resolution Crystal Structure Of A Sho | 3e-19 | ||
| 4dml_A | 269 | 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn | 3e-19 | ||
| 3ai3_A | 263 | The Crystal Structure Of L-Sorbose Reductase From G | 4e-19 | ||
| 1hdc_A | 254 | Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste | 4e-19 | ||
| 3gdf_A | 267 | Crystal Structure Of The Nadp-Dependent Mannitol De | 5e-19 | ||
| 2nm0_A | 253 | Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl | 5e-19 | ||
| 2q2q_A | 255 | Structure Of D-3-Hydroxybutyrate Dehydrogenase From | 7e-19 | ||
| 1o5i_A | 249 | Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei | 7e-19 | ||
| 2ew8_A | 249 | Crystal Structure Of The (s)-specific 1-phenylethan | 8e-19 | ||
| 2cf2_E | 226 | Architecture Of Mammalian Fatty Acid Synthase Lengt | 9e-19 | ||
| 2zk7_A | 257 | Structure Of A C-Terminal Deletion Mutant Of Thermo | 1e-18 | ||
| 2dtd_A | 264 | Structure Of Thermoplasma Acidophilum Aldohexose De | 1e-18 | ||
| 1edo_A | 244 | The X-Ray Structure Of Beta-Keto Acyl Carrier Prote | 1e-18 | ||
| 4hp8_A | 247 | Crystal Structure Of A Putative 2-Deoxy-D-Gluconate | 1e-18 | ||
| 3v2g_A | 271 | Crystal Structure Of A DehydrogenaseREDUCTASE FROM | 1e-18 | ||
| 4fgs_A | 273 | Crystal Structure Of A Probable Dehydrogenase Prote | 1e-18 | ||
| 1zem_A | 262 | Crystal Structure Of Nad+-Bound Xylitol Dehydrogena | 2e-18 | ||
| 4iiu_A | 267 | Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car | 2e-18 | ||
| 2yz7_A | 260 | X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F | 2e-18 | ||
| 3icc_A | 255 | Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car | 2e-18 | ||
| 3d3w_A | 244 | Structure Of L-Xylulose Reductase With Bound Coenzy | 2e-18 | ||
| 3i4f_A | 264 | Structure Of Putative 3-oxoacyl-reductase From Baci | 2e-18 | ||
| 1pr9_A | 244 | Human L-Xylulose Reductase Holoenzyme Length = 244 | 2e-18 | ||
| 3ijr_A | 291 | 2.05 Angstrom Resolution Crystal Structure Of A Sho | 2e-18 | ||
| 4e4y_A | 244 | The Crystal Structure Of A Short Chain Dehydrogenas | 3e-18 | ||
| 3tox_A | 280 | Crystal Structure Of A Short Chain Dehydrogenase In | 3e-18 | ||
| 2pd6_A | 264 | Structure Of Human Hydroxysteroid Dehydrogenase Typ | 3e-18 | ||
| 1ybv_A | 283 | Structure Of Trihydroxynaphthalene Reductase In Com | 7e-18 | ||
| 1doh_A | 283 | Structure Of Trihydroxynaphthalene Reductase In Com | 8e-18 | ||
| 1xhl_A | 297 | Crystal Structure Of Putative Tropinone Reductase-I | 2e-17 | ||
| 3ezl_A | 256 | Crystal Structure Of Acetyacetyl-Coa Reductase From | 2e-17 | ||
| 3oic_A | 258 | Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl | 2e-17 | ||
| 1hxh_A | 253 | Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D | 3e-17 | ||
| 3d3w_B | 245 | Structure Of L-Xylulose Reductase With Bound Coenzy | 4e-17 | ||
| 3a28_C | 258 | Crystal Structure Of L-2,3-Butanediol Dehydrogenase | 8e-17 | ||
| 2cfc_A | 250 | Structural Basis For Stereo Selectivity In The (R)- | 9e-17 | ||
| 3n74_A | 261 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 1e-16 | ||
| 3oec_A | 317 | Crystal Structure Of Carveol Dehydrogenase From Myc | 1e-16 | ||
| 3ak4_A | 263 | Crystal Structure Of Nadh-Dependent Quinuclidinone | 1e-16 | ||
| 3v2h_A | 281 | The Crystal Structure Of D-Beta-Hydroxybutyrate Deh | 1e-16 | ||
| 4imr_A | 275 | Crystal Structure Of 3-oxoacyl (acyl-carrier-protei | 1e-16 | ||
| 3rkr_A | 262 | Crystal Structure Of A Metagenomic Short-Chain Oxid | 3e-16 | ||
| 3is3_A | 270 | Crystal Structure Of 17beta-Hydroxysteroid Dehydrog | 3e-16 | ||
| 2a4k_A | 263 | 3-Oxoacyl-[acyl Carrier Protein] Reductase From The | 3e-16 | ||
| 3m1l_A | 432 | Crystal Strucutre Of A C-Terminal Trunacted Mutant | 6e-16 | ||
| 3lls_A | 475 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 6e-16 | ||
| 3v1t_C | 462 | Crystal Structure Of A Putative Ketoacyl Reductase | 6e-16 | ||
| 3q6i_A | 446 | Crystal Structure Of Fabg4 And Coenzyme Binary Comp | 6e-16 | ||
| 1geg_A | 256 | Cryatal Structure Analysis Of Meso-2,3-Butanediol D | 7e-16 | ||
| 4fw8_A | 454 | Crystal Structure Of Fabg4 Complexed With Coenzyme | 7e-16 | ||
| 3itd_A | 270 | Crystal Structure Of An Inactive 17beta-Hydroxyster | 1e-15 | ||
| 4e3z_A | 272 | Crystal Structure Of A Oxidoreductase From Rhizobiu | 1e-15 | ||
| 3s55_A | 281 | Crystal Structure Of A Putative Short-Chain Dehydro | 3e-15 | ||
| 2z1n_A | 260 | Crystal Structure Of Ape0912 From Aeropyrum Pernix | 4e-15 | ||
| 3u0b_A | 454 | Crystal Structure Of An Oxidoreductase From Mycobac | 5e-15 | ||
| 1uls_A | 245 | Crystal Structure Of Tt0140 From Thermus Thermophil | 7e-15 | ||
| 4egf_A | 266 | Crystal Structure Of A L-Xylulose Reductase From My | 1e-14 | ||
| 3tsc_A | 277 | Crystal Structure Of Short Chain Dehydrogenase Map_ | 1e-14 | ||
| 2dkn_A | 255 | Crystal Structure Of The 3-alpha-hydroxysteroid Deh | 1e-14 | ||
| 3lf1_A | 265 | Apo Structure Of The Short Chain Oxidoreductase Q9h | 1e-14 | ||
| 3u5t_A | 267 | The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr | 1e-14 | ||
| 2bgk_A | 278 | X-Ray Structure Of Apo-Secoisolariciresinol Dehydro | 2e-14 | ||
| 3r3s_A | 294 | Structure Of The Ygha Oxidoreductase From Salmonell | 3e-14 | ||
| 3v8b_A | 283 | Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro | 3e-14 | ||
| 1fjh_A | 257 | The Crystal Structure Of 3-Alpha-Hydroxysteroid Deh | 3e-14 | ||
| 3uxy_A | 266 | The Crystal Structure Of Short Chain Dehydrogenase | 4e-14 | ||
| 3gvc_A | 277 | Crystal Structure Of Probable Short-Chain Dehydroge | 4e-14 | ||
| 1yde_A | 270 | Crystal Structure Of Human Retinal Short-Chain Dehy | 6e-14 | ||
| 3qiv_A | 253 | Crystal Structure Of A Putative Short-Chain Dehydro | 9e-14 | ||
| 1k2w_A | 256 | Crystal Structure Of Sorbitol Dehydrogenase From R. | 2e-13 | ||
| 3o38_A | 266 | Crystal Structure Of A Short Chain Dehydrogenase Fr | 2e-13 | ||
| 2gdz_A | 267 | Crystal Structure Of 15-Hydroxyprostaglandin Dehydr | 2e-13 | ||
| 3un1_A | 260 | Crystal Structure Of An Oxidoreductase From Sinorhi | 2e-13 | ||
| 2bd0_A | 244 | Chlorobium Tepidum Sepiapterin Reductase Complexed | 2e-13 | ||
| 3nug_A | 247 | Crystal Structure Of Wild Type Tetrameric Pyridoxal | 2e-13 | ||
| 2et6_A | 604 | (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid | 3e-13 | ||
| 4iqg_C | 271 | Crystal Structure Of Bpro0239 Oxidoreductase From P | 3e-13 | ||
| 2ag5_A | 246 | Crystal Structure Of Human Dhrs6 Length = 246 | 4e-13 | ||
| 3tjr_A | 301 | Crystal Structure Of A Rv0851c Ortholog Short Chain | 9e-13 | ||
| 4fc6_A | 277 | Studies On Dcr Shed New Light On Peroxisomal Beta-O | 1e-12 | ||
| 3t4x_A | 267 | Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU | 1e-12 | ||
| 2y93_A | 281 | Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2 | 2e-12 | ||
| 3rku_A | 287 | Substrate Fingerprint And The Structure Of Nadp+ De | 2e-12 | ||
| 3svt_A | 281 | Structure Of A Short-Chain Type DehydrogenaseREDUCT | 2e-12 | ||
| 3sx2_A | 278 | Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Ca | 3e-12 | ||
| 4e6p_A | 259 | Crystal Structure Of A Probable Sorbitol Dehydrogen | 3e-12 | ||
| 1h5q_A | 265 | Mannitol Dehydrogenase From Agaricus Bisporus Lengt | 3e-12 | ||
| 3imf_A | 257 | 1.99 Angstrom Resolution Crystal Structure Of A Sho | 4e-12 | ||
| 3edm_A | 259 | Crystal Structure Of A Short Chain Dehydrogenase Fr | 4e-12 | ||
| 2ilt_A | 275 | Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W | 5e-12 | ||
| 2irw_A | 264 | Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W | 5e-12 | ||
| 3d5q_A | 272 | Crystal Structure Of 11b-Hsd1 In Complex With Triaz | 5e-12 | ||
| 2qq5_A | 260 | Crystal Structure Of Human Sdr Family Member 1 Leng | 5e-12 | ||
| 1xu7_A | 286 | Crystal Structure Of The Interface Open Conformatio | 5e-12 | ||
| 3pdj_A | 273 | Crystal Structure Of Human 11-Beta-Hydroxysteroid D | 5e-12 | ||
| 2rbe_A | 275 | The Discovery Of 2-Anilinothiazolones As 11beta-Hsd | 6e-12 | ||
| 2bel_A | 283 | Structure Of Human 11-Beta-Hydroxysteroid Dehydroge | 6e-12 | ||
| 3ch6_A | 286 | Crystal Structure Of 11beta-Hsd1 Double Mutant (L26 | 7e-12 | ||
| 3ndr_A | 247 | Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro | 8e-12 | ||
| 4bb5_A | 292 | Free-Wilson And Structural Approaches To Co-Optimis | 1e-11 | ||
| 4bb6_A | 292 | Free-Wilson And Structural Approaches To Co-Optimis | 2e-11 | ||
| 4hfr_A | 272 | Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In | 2e-11 | ||
| 1bdb_A | 277 | Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From | 2e-11 | ||
| 3t7c_A | 299 | Crystal Structure Of Carveol Dehydrogenase From Myc | 3e-11 | ||
| 3afm_A | 258 | Crystal Structure Of Aldose Reductase A1-R Responsi | 4e-11 | ||
| 1w6u_A | 302 | Structure Of Human Decr Ternary Complex Length = 30 | 4e-11 | ||
| 3ged_A | 247 | Fingerprint And Structural Analysis Of A Apo Scor E | 5e-11 | ||
| 3gmd_A | 264 | Structure-Based Design Of 7-Azaindole-Pyrrolidines | 6e-11 | ||
| 3kzv_A | 254 | The Crystal Structure Of A Cytoplasmic Protein With | 6e-11 | ||
| 2fwm_X | 250 | Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodih | 2e-10 | ||
| 1y5m_A | 276 | The Crystal Structure Of Murine 11b-Hydroxysteroid | 2e-10 | ||
| 1xg5_A | 279 | Structure Of Human Putative Dehydrogenase Mgc4172 I | 2e-10 | ||
| 3lz6_A | 263 | Guinea Pig 11beta Hydroxysteroid Dehydrogenase With | 7e-10 | ||
| 1ja9_A | 274 | Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen | 8e-10 | ||
| 1xse_A | 295 | Crystal Structure Of Guinea Pig 11beta-Hydroxystero | 9e-10 | ||
| 3dwf_A | 276 | Crystal Structure Of The Guinea Pig 11beta-Hydroxys | 1e-09 | ||
| 3g49_A | 277 | N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b- | 1e-09 | ||
| 2xox_A | 288 | Crystal Structure Of Pteridine Reductase (Ptr1) Fro | 1e-09 | ||
| 3ksu_A | 262 | Crystal Structure Of Short-Chain Dehydrogenase From | 1e-09 | ||
| 3tfo_A | 264 | Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car | 1e-09 | ||
| 3pxx_A | 287 | Crystal Structure Of Carveol Dehydrogenase From Myc | 1e-09 | ||
| 1w73_A | 302 | Binary Structure Of Human Decr Solved By Semet Sad. | 1e-09 | ||
| 1ulu_A | 261 | Crystal Structure Of Tt0143 From Thermus Thermophil | 1e-09 | ||
| 3oif_A | 266 | Crystal Structure Of Enoyl-Acp Reductases I (Fabi) | 2e-09 | ||
| 2p91_A | 285 | Crystal Structure Of Enoyl-[acyl-Carrier-Protein] R | 2e-09 | ||
| 2jap_A | 247 | Clavulanic Acid Dehydrogenase: Structural And Bioch | 2e-09 | ||
| 4da9_A | 280 | Crystal Structure Of Putative Short-Chain Dehydroge | 2e-09 | ||
| 1p33_A | 289 | Pteridine Reductase From Leishmania Tarentolae Comp | 2e-09 | ||
| 2yw9_A | 261 | Crystal Structure Of Tt0143 From Thermus Thermophil | 2e-09 | ||
| 3m1a_A | 281 | The Crystal Structure Of A Short-Chain Dehydrogenas | 3e-09 | ||
| 1e92_A | 288 | Pteridine Reductase 1 From Leishmania Major Complex | 5e-09 | ||
| 2pfg_A | 276 | Crystal Structure Of Human Cbr1 In Complex With Big | 5e-09 | ||
| 2qhx_A | 328 | Structure Of Pteridine Reductase From Leishmania Ma | 5e-09 | ||
| 1w0c_A | 307 | Inhibition Of Leishmania Major Pteridine Reductase | 5e-09 | ||
| 1e7w_A | 291 | One Active Site, Two Modes Of Reduction Correlate T | 5e-09 | ||
| 1zbq_A | 327 | Crystal Structure Of Human 17-beta-hydroxysteroid D | 6e-09 | ||
| 1wma_A | 276 | Crystal Structure Of Human Cbr1 In Complex With Hyd | 6e-09 | ||
| 1e6w_A | 260 | Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co | 1e-08 | ||
| 1e3s_A | 261 | Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co | 1e-08 | ||
| 4gkb_A | 258 | Crystal Structure Of A Short Chain Dehydrogenase Ho | 1e-08 | ||
| 2jah_A | 247 | Biochemical And Structural Analysis Of The Clavulan | 2e-08 | ||
| 1u7t_A | 261 | Crystal Structure Of AbadHSD10 WITH A BOUND INHIBIT | 2e-08 | ||
| 2o23_A | 265 | The Structure Of Wild-Type Human Hadh2 (17beta-Hydr | 2e-08 | ||
| 1so8_A | 261 | Abeta-bound Human Abad Structure [also Known As 3-h | 2e-08 | ||
| 2nwq_A | 272 | Short Chain Dehydrogenase From Pseudomonas Aerugino | 3e-08 | ||
| 2ehd_A | 234 | Crystal Structure Analysis Of Oxidoreductase Length | 3e-08 | ||
| 3ppi_A | 281 | Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenas | 4e-08 | ||
| 1gz6_A | 319 | (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat | 4e-08 | ||
| 4h15_A | 261 | Crystal Structure Of A Short Chain Alcohol Dehydrog | 4e-08 | ||
| 3bmc_A | 288 | Structure Of Pteridine Reductase 1 (Ptr1) From Tryp | 4e-08 | ||
| 3oml_A | 613 | Structure Of Full-Length Peroxisomal Multifunctiona | 4e-08 | ||
| 3asu_A | 248 | Crystal Structure Of Serine Dehydrogenase From Esch | 4e-08 | ||
| 2wd7_A | 268 | Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce | 5e-08 | ||
| 1e3w_A | 261 | Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co | 6e-08 | ||
| 3bmc_B | 288 | Structure Of Pteridine Reductase 1 (Ptr1) From Tryp | 6e-08 | ||
| 1zmo_A | 244 | Apo Structure Of Haloalcohol Dehalogenase Hhea Of A | 6e-08 | ||
| 3uve_A | 286 | Crystal Structure Of Carveol Dehydrogenase ((+)-Tra | 7e-08 | ||
| 3uwr_A | 286 | Crystal Structure Of Carveol Dehydrogenase From Myc | 8e-08 | ||
| 1yb1_A | 272 | Crystal Structure Of Human 17-Beta-Hydroxysteroid D | 9e-08 | ||
| 3e9n_A | 245 | Crystal Structure Of A Putative Short-Chain Dehydro | 1e-07 | ||
| 3uce_A | 223 | Crystal Structure Of A Small-Chain Dehydrogenase In | 1e-07 | ||
| 3p19_A | 266 | Improved Nadph-Dependent Blue Fluorescent Protein L | 2e-07 | ||
| 4ixt_A | 254 | Structure Of A 37-fold Mutant Of Halohydrin Dehalog | 2e-07 | ||
| 3qlj_A | 322 | Crystal Structure Of A Short Chain Dehydrogenase Fr | 3e-07 | ||
| 2c7v_A | 268 | Structure Of Trypanosoma Brucei Pteridine Reductase | 3e-07 | ||
| 3jq7_A | 288 | Crystal Structure Of Pteridine Reductase 1 (Ptr1) F | 4e-07 | ||
| 2wd7_B | 268 | Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce | 4e-07 | ||
| 1n5d_A | 288 | Crystal Structure Of Porcine Testicular Carbonyl Re | 4e-07 | ||
| 3jq7_B | 288 | Crystal Structure Of Pteridine Reductase 1 (Ptr1) F | 4e-07 | ||
| 2jjy_A | 268 | Crystal Structure Of Francisella Tularensis Enoyl R | 4e-07 | ||
| 3g1t_A | 258 | Crystal Structure Of Short Chain Dehydrogenase From | 4e-07 | ||
| 3nrc_A | 280 | Crystal Stucture Of The Francisella Tularensis Enoy | 5e-07 | ||
| 3f5q_A | 262 | Crystal Structure Of Putative Short Chain Dehydroge | 6e-07 | ||
| 3gnt_A | 256 | Crystal Structure Of The Staphylococcus Aureus Enoy | 7e-07 | ||
| 3f1l_A | 252 | The 0.95 A Structure Of An Oxidoreductase, Ycik Fro | 7e-07 | ||
| 4fs3_A | 256 | Crystal Structure Of Staphylococcus Aureus Enoyl-Ac | 7e-07 | ||
| 3gns_A | 260 | Crystal Structure Of The Staphylococcus Aureus Enoy | 7e-07 | ||
| 3pjf_A | 270 | Structure Of Enr G93v Mutant-Nad+-Triclosan Complex | 7e-07 | ||
| 4all_A | 277 | Crystal Structure Of S. Aureus Fabi In Complex With | 7e-07 | ||
| 4ali_A | 282 | Crystal Structure Of S. Aureus Fabi In Complex With | 8e-07 | ||
| 3pje_A | 270 | Structure Of Enr G93s Mutant-Nad+-Triclosan Complex | 1e-06 | ||
| 2hrb_A | 274 | Crystal Structure Of Human Carbonyl Reductase 3, Co | 1e-06 | ||
| 1qsg_A | 265 | Crystal Structure Of Enoyl Reductase Inhibition By | 1e-06 | ||
| 1c14_A | 262 | Crystal Structure Of E Coli Enoyl Reductase-nad+-tr | 1e-06 | ||
| 3pjd_A | 270 | Structure Of Enr G93a Mutant-Nad+-Triclosan Complex | 1e-06 | ||
| 1dfg_A | 261 | X-Ray Structure Of Escherichia Coli Enoyl Reductase | 1e-06 | ||
| 3ek2_A | 271 | Crystal Structure Of Eonyl-(Acyl Carrier Protein) R | 2e-06 | ||
| 3f5s_A | 255 | Crystal Structure Of Putatitve Short Chain Dehydrog | 2e-06 | ||
| 3ojf_A | 257 | Crystal Structure Of The Bacillus Cereus Enoyl-Acyl | 3e-06 | ||
| 3tl3_A | 257 | Structure Of A Short-Chain Type DehydrogenaseREDUCT | 3e-06 | ||
| 1pwx_A | 254 | Crystal Structure Of The Haloalcohol Dehalogenase H | 4e-06 | ||
| 2qio_A | 256 | X-Ray Structure Of Enoyl-Acyl Carrier Protein Reduc | 4e-06 | ||
| 1mxf_A | 276 | Crystal Structure Of Inhibitor Complex Of Putative | 4e-06 | ||
| 3ioy_A | 319 | Structure Of Putative Short-Chain Dehydrogenase (Sa | 6e-06 | ||
| 3k2e_A | 296 | Crystal Structure Of Enoyl-(Acyl-Carrier-Protein) R | 1e-05 | ||
| 3grk_A | 293 | Crystal Structure Of Short Chain Dehydrogenase Redu | 2e-05 | ||
| 1mxh_A | 276 | Crystal Structure Of Substrate Complex Of Putative | 2e-05 | ||
| 3nyw_A | 250 | Crystal Structure Of A Betaketoacyl-[acp] Reductase | 4e-05 | ||
| 3o26_A | 311 | The Structure Of Salutaridine Reductase From Papave | 5e-05 | ||
| 4eit_A | 276 | Crystal Structure Of An Enoyl-(Acyl Carrier Protein | 6e-05 | ||
| 3i1j_A | 247 | Structure Of A Putative Short Chain Dehydrogenase F | 1e-04 | ||
| 3f1k_A | 252 | Crystal Structure Of Ycik From E. Coli, An Oxidored | 1e-04 | ||
| 3iah_A | 256 | Crystal Structure Of Short Chain Dehydrogenase (yci | 2e-04 | ||
| 2pd3_A | 275 | Crystal Structure Of The Helicobacter Pylori Enoyl- | 3e-04 | ||
| 3e9q_A | 273 | Crystal Structure Of The Short Chain Dehydrogenase | 5e-04 | ||
| 3kvo_A | 346 | Crystal Structure Of The Catalytic Domain Of Human | 8e-04 |
| >pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273 | Back alignment and structure |
|
| >pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266 | Back alignment and structure |
|
| >pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259 | Back alignment and structure |
|
| >pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260 | Back alignment and structure |
|
| >pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267 | Back alignment and structure |
|
| >pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242 | Back alignment and structure |
|
| >pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247 | Back alignment and structure |
|
| >pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261 | Back alignment and structure |
|
| >pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291 | Back alignment and structure |
|
| >pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260 | Back alignment and structure |
|
| >pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239 | Back alignment and structure |
|
| >pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255 | Back alignment and structure |
|
| >pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271 | Back alignment and structure |
|
| >pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270 | Back alignment and structure |
|
| >pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281 | Back alignment and structure |
|
| >pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277 | Back alignment and structure |
|
| >pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256 | Back alignment and structure |
|
| >pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256 | Back alignment and structure |
|
| >pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252 | Back alignment and structure |
|
| >pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255 | Back alignment and structure |
|
| >pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281 | Back alignment and structure |
|
| >pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261 | Back alignment and structure |
|
| >pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277 | Back alignment and structure |
|
| >pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281 | Back alignment and structure |
|
| >pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281 | Back alignment and structure |
|
| >pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276 | Back alignment and structure |
|
| >pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303 | Back alignment and structure |
|
| >pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281 | Back alignment and structure |
|
| >pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246 | Back alignment and structure |
|
| >pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278 | Back alignment and structure |
|
| >pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261 | Back alignment and structure |
|
| >pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251 | Back alignment and structure |
|
| >pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251 | Back alignment and structure |
|
| >pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269 | Back alignment and structure |
|
| >pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251 | Back alignment and structure |
|
| >pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249 | Back alignment and structure |
|
| >pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246 | Back alignment and structure |
|
| >pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261 | Back alignment and structure |
|
| >pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254 | Back alignment and structure |
|
| >pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261 | Back alignment and structure |
|
| >pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261 | Back alignment and structure |
|
| >pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244 | Back alignment and structure |
|
| >pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260 | Back alignment and structure |
|
| >pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276 | Back alignment and structure |
|
| >pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269 | Back alignment and structure |
|
| >pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244 | Back alignment and structure |
|
| >pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269 | Back alignment and structure |
|
| >pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269 | Back alignment and structure |
|
| >pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269 | Back alignment and structure |
|
| >pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273 | Back alignment and structure |
|
| >pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246 | Back alignment and structure |
|
| >pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269 | Back alignment and structure |
|
| >pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279 | Back alignment and structure |
|
| >pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248 | Back alignment and structure |
|
| >pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260 | Back alignment and structure |
|
| >pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262 | Back alignment and structure |
|
| >pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285 | Back alignment and structure |
|
| >pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244 | Back alignment and structure |
|
| >pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260 | Back alignment and structure |
|
| >pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248 | Back alignment and structure |
|
| >pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260 | Back alignment and structure |
|
| >pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260 | Back alignment and structure |
|
| >pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260 | Back alignment and structure |
|
| >pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277 | Back alignment and structure |
|
| >pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253 | Back alignment and structure |
|
| >pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247 | Back alignment and structure |
|
| >pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293 | Back alignment and structure |
|
| >pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280 | Back alignment and structure |
|
| >pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247 | Back alignment and structure |
|
| >pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245 | Back alignment and structure |
|
| >pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267 | Back alignment and structure |
|
| >pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247 | Back alignment and structure |
|
| >pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279 | Back alignment and structure |
|
| >pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255 | Back alignment and structure |
|
| >pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254 | Back alignment and structure |
|
| >pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263 | Back alignment and structure |
|
| >pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266 | Back alignment and structure |
|
| >pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267 | Back alignment and structure |
|
| >pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271 | Back alignment and structure |
|
| >pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249 | Back alignment and structure |
|
| >pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254 | Back alignment and structure |
|
| >pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280 | Back alignment and structure |
|
| >pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271 | Back alignment and structure |
|
| >pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291 | Back alignment and structure |
|
| >pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269 | Back alignment and structure |
|
| >pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263 | Back alignment and structure |
|
| >pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254 | Back alignment and structure |
|
| >pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol Dehydrogenase From Cladosporium Herbarum. Length = 267 | Back alignment and structure |
|
| >pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253 | Back alignment and structure |
|
| >pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255 | Back alignment and structure |
|
| >pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Reductase (Tm1169) From Thermotoga Maritima At 2.50 A Resolution Length = 249 | Back alignment and structure |
|
| >pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249 | Back alignment and structure |
|
| >pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226 | Back alignment and structure |
|
| >pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257 | Back alignment and structure |
|
| >pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264 | Back alignment and structure |
|
| >pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244 | Back alignment and structure |
|
| >pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247 | Back alignment and structure |
|
| >pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271 | Back alignment and structure |
|
| >pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273 | Back alignment and structure |
|
| >pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262 | Back alignment and structure |
|
| >pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2.1 A Resolution Length = 267 | Back alignment and structure |
|
| >pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260 | Back alignment and structure |
|
| >pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255 | Back alignment and structure |
|
| >pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244 | Back alignment and structure |
|
| >pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264 | Back alignment and structure |
|
| >pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244 | Back alignment and structure |
|
| >pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291 | Back alignment and structure |
|
| >pdb|4E4Y|A Chain A, The Crystal Structure Of A Short Chain Dehydrogenase Family Protein From Francisella Tularensis Subsp. Tularensis Schu S4 Length = 244 | Back alignment and structure |
|
| >pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280 | Back alignment and structure |
|
| >pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264 | Back alignment and structure |
|
| >pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283 | Back alignment and structure |
|
| >pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297 | Back alignment and structure |
|
| >pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256 | Back alignment and structure |
|
| >pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258 | Back alignment and structure |
|
| >pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253 | Back alignment and structure |
|
| >pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258 | Back alignment and structure |
|
| >pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250 | Back alignment and structure |
|
| >pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261 | Back alignment and structure |
|
| >pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317 | Back alignment and structure |
|
| >pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263 | Back alignment and structure |
|
| >pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281 | Back alignment and structure |
|
| >pdb|4IMR|A Chain A, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein) Reductase (target Efi-506442) From Agrobacterium Tumefaciens C58 With Nadp Bound Length = 275 | Back alignment and structure |
|
| >pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262 | Back alignment and structure |
|
| >pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270 | Back alignment and structure |
|
| >pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263 | Back alignment and structure |
|
| >pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432 | Back alignment and structure |
|
| >pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475 | Back alignment and structure |
|
| >pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462 | Back alignment and structure |
|
| >pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446 | Back alignment and structure |
|
| >pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256 | Back alignment and structure |
|
| >pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454 | Back alignment and structure |
|
| >pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270 | Back alignment and structure |
|
| >pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272 | Back alignment and structure |
|
| >pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281 | Back alignment and structure |
|
| >pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1 Length = 260 | Back alignment and structure |
|
| >pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454 | Back alignment and structure |
|
| >pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245 | Back alignment and structure |
|
| >pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From Mycobacterium Smegmatis Length = 266 | Back alignment and structure |
|
| >pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277 | Back alignment and structure |
|
| >pdb|2DKN|A Chain A, Crystal Structure Of The 3-alpha-hydroxysteroid Dehydrogenase From Pseudomonas Sp. B-0831 Complexed With Nadh Length = 255 | Back alignment and structure |
|
| >pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265 | Back alignment and structure |
|
| >pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267 | Back alignment and structure |
|
| >pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278 | Back alignment and structure |
|
| >pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294 | Back alignment and structure |
|
| >pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283 | Back alignment and structure |
|
| >pdb|1FJH|A Chain A, The Crystal Structure Of 3-Alpha-Hydroxysteroid Dehydrogenase From Comamonas Testosteroni, A Member Of The Short Chain DehydrogenaseREDUCTASE FAMILY Length = 257 | Back alignment and structure |
|
| >pdb|3UXY|A Chain A, The Crystal Structure Of Short Chain Dehydrogenase From Rhodobacter Sphaeroides Length = 266 | Back alignment and structure |
|
| >pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277 | Back alignment and structure |
|
| >pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270 | Back alignment and structure |
|
| >pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253 | Back alignment and structure |
|
| >pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256 | Back alignment and structure |
|
| >pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266 | Back alignment and structure |
|
| >pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267 | Back alignment and structure |
|
| >pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260 | Back alignment and structure |
|
| >pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244 | Back alignment and structure |
|
| >pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247 | Back alignment and structure |
|
| >pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604 | Back alignment and structure |
|
| >pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271 | Back alignment and structure |
|
| >pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6 Length = 246 | Back alignment and structure |
|
| >pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301 | Back alignment and structure |
|
| >pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277 | Back alignment and structure |
|
| >pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267 | Back alignment and structure |
|
| >pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281 | Back alignment and structure |
|
| >pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287 | Back alignment and structure |
|
| >pdb|3SVT|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 281 | Back alignment and structure |
|
| >pdb|3SX2|A Chain A, Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Paratuberculosis In Complex With Nad Length = 278 | Back alignment and structure |
|
| >pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259 | Back alignment and structure |
|
| >pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus Length = 265 | Back alignment and structure |
|
| >pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257 | Back alignment and structure |
|
| >pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Agrobacterium Tumefaciens Length = 259 | Back alignment and structure |
|
| >pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Sulfone Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Ether Inhibitor Length = 264 | Back alignment and structure |
|
| >pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260 | Back alignment and structure |
|
| >pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of Tetrameric 11b-hsd1 Length = 286 | Back alignment and structure |
|
| >pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase 1 (11b-Hsd1) In Complex With 4,4-Disubstituted Cyclohexylbenzamide Inhibitor Length = 273 | Back alignment and structure |
|
| >pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1 Inhibitors Length = 275 | Back alignment and structure |
|
| >pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In Complex With Nadp And Carbenoxolone Length = 283 | Back alignment and structure |
|
| >pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r, F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3- Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone Length = 286 | Back alignment and structure |
|
| >pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247 | Back alignment and structure |
|
| >pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292 | Back alignment and structure |
|
| >pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292 | Back alignment and structure |
|
| >pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In Complex With An Orally Bioavailable Acidic Inhibitor Azd4017. Length = 272 | Back alignment and structure |
|
| >pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From Pseudomonas Sp. Lb400 Length = 277 | Back alignment and structure |
|
| >pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299 | Back alignment and structure |
|
| >pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For Alginate Metabolism Length = 258 | Back alignment and structure |
|
| >pdb|1W6U|A Chain A, Structure Of Human Decr Ternary Complex Length = 302 | Back alignment and structure |
|
| >pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247 | Back alignment and structure |
|
| >pdb|3GMD|A Chain A, Structure-Based Design Of 7-Azaindole-Pyrrolidines As Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I Length = 264 | Back alignment and structure |
|
| >pdb|3KZV|A Chain A, The Crystal Structure Of A Cytoplasmic Protein With Unknown Function From Saccharomyces Cerevisiae Length = 254 | Back alignment and structure |
|
| >pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy Benzoate Dehydrogenase Length = 250 | Back alignment and structure |
|
| >pdb|1Y5M|A Chain A, The Crystal Structure Of Murine 11b-Hydroxysteroid Dehydrogenase: An Important Therapeutic Target For Diabetes Length = 276 | Back alignment and structure |
|
| >pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279 | Back alignment and structure |
|
| >pdb|3LZ6|A Chain A, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With Pf-877423 Length = 263 | Back alignment and structure |
|
| >pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274 | Back alignment and structure |
|
| >pdb|1XSE|A Chain A, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Length = 295 | Back alignment and structure |
|
| >pdb|3DWF|A Chain A, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Mutant F278e Length = 276 | Back alignment and structure |
|
| >pdb|3G49|A Chain A, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of Pf-915275 Length = 277 | Back alignment and structure |
|
| >pdb|2XOX|A Chain A, Crystal Structure Of Pteridine Reductase (Ptr1) From Leishmania Donovani Length = 288 | Back alignment and structure |
|
| >pdb|3KSU|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From Oenococcus Oeni Psu-1 Length = 262 | Back alignment and structure |
|
| >pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264 | Back alignment and structure |
|
| >pdb|3PXX|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nicotinamide Adenine Dinucleotide Length = 287 | Back alignment and structure |
|
| >pdb|1W73|A Chain A, Binary Structure Of Human Decr Solved By Semet Sad. Length = 302 | Back alignment and structure |
|
| >pdb|1ULU|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8 Length = 261 | Back alignment and structure |
|
| >pdb|3OIF|A Chain A, Crystal Structure Of Enoyl-Acp Reductases I (Fabi) From B. Subtilis (Complex With Nad And Tcl) Length = 266 | Back alignment and structure |
|
| >pdb|2P91|A Chain A, Crystal Structure Of Enoyl-[acyl-Carrier-Protein] Reductase (Nadh) From Aquifex Aeolicus Vf5 Length = 285 | Back alignment and structure |
|
| >pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247 | Back alignment and structure |
|
| >pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280 | Back alignment and structure |
|
| >pdb|1P33|A Chain A, Pteridine Reductase From Leishmania Tarentolae Complex With Nadph And Mtx Length = 289 | Back alignment and structure |
|
| >pdb|2YW9|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8 Length = 261 | Back alignment and structure |
|
| >pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281 | Back alignment and structure |
|
| >pdb|1E92|A Chain A, Pteridine Reductase 1 From Leishmania Major Complexed With Nadp+ And Dihydrobiopterin Length = 288 | Back alignment and structure |
|
| >pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2 Length = 276 | Back alignment and structure |
|
| >pdb|2QHX|A Chain A, Structure Of Pteridine Reductase From Leishmania Major Complexed With A Ligand Length = 328 | Back alignment and structure |
|
| >pdb|1W0C|A Chain A, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1) By 2,4,6-Triaminoquinazoline; Structure Of The Nadp Ternary Complex. Length = 307 | Back alignment and structure |
|
| >pdb|1E7W|A Chain A, One Active Site, Two Modes Of Reduction Correlate The Mechanism Of Leishmania Pteridine Reductase With Pterin Metabolism And Antifolate Drug Resistance In Trpanosomes Length = 291 | Back alignment and structure |
|
| >pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327 | Back alignment and structure |
|
| >pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp Length = 276 | Back alignment and structure |
|
| >pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And Estradiol Length = 260 | Back alignment and structure |
|
| >pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh Length = 261 | Back alignment and structure |
|
| >pdb|4GKB|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog (Target Efi- 505321) From Burkholderia Multivorans, Unliganded Structure Length = 258 | Back alignment and structure |
|
| >pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247 | Back alignment and structure |
|
| >pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR Length = 261 | Back alignment and structure |
|
| >pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2 (17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To Nad+ At 1.2 A Length = 265 | Back alignment and structure |
|
| >pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As 3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh), Endoplasmic Reticulum- Associated Amyloid Beta-peptide Binding Protein (erab)] Length = 261 | Back alignment and structure |
|
| >pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272 | Back alignment and structure |
|
| >pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234 | Back alignment and structure |
|
| >pdb|3PPI|A Chain A, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase Type-2 From Mycobacterium Avium Length = 281 | Back alignment and structure |
|
| >pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319 | Back alignment and structure |
|
| >pdb|4H15|A Chain A, Crystal Structure Of A Short Chain Alcohol Dehydrogenase-Related Dehydrogenase (Target Id Nysgrc-011812) From Sinorhizobium Meliloti 1021 In Space Group P21 Length = 261 | Back alignment and structure |
|
| >pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288 | Back alignment and structure |
|
| >pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613 | Back alignment and structure |
|
| >pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248 | Back alignment and structure |
|
| >pdb|2WD7|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268 | Back alignment and structure |
|
| >pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And 3-Keto Butyrate Length = 261 | Back alignment and structure |
|
| >pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288 | Back alignment and structure |
|
| >pdb|1ZMO|A Chain A, Apo Structure Of Haloalcohol Dehalogenase Hhea Of Arthrobacter Sp. Ad2 Length = 244 | Back alignment and structure |
|
| >pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286 | Back alignment and structure |
|
| >pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286 | Back alignment and structure |
|
| >pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid Dehydrogenase Type Xi Length = 272 | Back alignment and structure |
|
| >pdb|3E9N|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM Length = 245 | Back alignment and structure |
|
| >pdb|3UCE|A Chain A, Crystal Structure Of A Small-Chain Dehydrogenase In Complex With Nadph Length = 223 | Back alignment and structure |
|
| >pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein Length = 266 | Back alignment and structure |
|
| >pdb|4IXT|A Chain A, Structure Of A 37-fold Mutant Of Halohydrin Dehalogenase (hhec) Bound To Ethyl (r)-4-cyano-3-hydroxybutyrate Length = 254 | Back alignment and structure |
|
| >pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322 | Back alignment and structure |
|
| >pdb|2C7V|A Chain A, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1) In Ternary Complex With Cofactor And The Antifolate Methotrexate Length = 268 | Back alignment and structure |
|
| >pdb|3JQ7|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288 | Back alignment and structure |
|
| >pdb|2WD7|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268 | Back alignment and structure |
|
| >pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase 20beta-Hydroxysteroid Dehydrogenase Length = 288 | Back alignment and structure |
|
| >pdb|3JQ7|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288 | Back alignment and structure |
|
| >pdb|2JJY|A Chain A, Crystal Structure Of Francisella Tularensis Enoyl Reductase (Ftfabi) With Bound Nad Length = 268 | Back alignment and structure |
|
| >pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258 | Back alignment and structure |
|
| >pdb|3NRC|A Chain A, Crystal Stucture Of The Francisella Tularensis Enoyl-Acyl Carrier Protein Reductase (Fabi) In Complex With Nad+ And Triclosan Length = 280 | Back alignment and structure |
|
| >pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase From Escherichia Coli Cft073 Length = 262 | Back alignment and structure |
|
| >pdb|3GNT|A Chain A, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl Carrier Protein Reductase (Fabi) In Apo Form (Two Molecules In Au) Length = 256 | Back alignment and structure |
|
| >pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From E.Coli Length = 252 | Back alignment and structure |
|
| >pdb|4FS3|A Chain A, Crystal Structure Of Staphylococcus Aureus Enoyl-Acp Reductase In Complex With Nadp And Afn-1252 Length = 256 | Back alignment and structure |
|
| >pdb|3GNS|A Chain A, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl Carrier Protein Reductase (Fabi) In Apo Form (One Molecule In Au) Length = 260 | Back alignment and structure |
|
| >pdb|3PJF|A Chain A, Structure Of Enr G93v Mutant-Nad+-Triclosan Complex Length = 270 | Back alignment and structure |
|
| >pdb|4ALL|A Chain A, Crystal Structure Of S. Aureus Fabi In Complex With Nadp And Triclosan (P212121) Length = 277 | Back alignment and structure |
|
| >pdb|4ALI|A Chain A, Crystal Structure Of S. Aureus Fabi In Complex With Nadp And Triclosan (P1) Length = 282 | Back alignment and structure |
|
| >pdb|3PJE|A Chain A, Structure Of Enr G93s Mutant-Nad+-Triclosan Complex Length = 270 | Back alignment and structure |
|
| >pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed With Nadp+ Length = 274 | Back alignment and structure |
|
| >pdb|1QSG|A Chain A, Crystal Structure Of Enoyl Reductase Inhibition By Triclosan Length = 265 | Back alignment and structure |
|
| >pdb|1C14|A Chain A, Crystal Structure Of E Coli Enoyl Reductase-nad+-triclosan Complex Length = 262 | Back alignment and structure |
|
| >pdb|3PJD|A Chain A, Structure Of Enr G93a Mutant-Nad+-Triclosan Complex Length = 270 | Back alignment and structure |
|
| >pdb|1DFG|A Chain A, X-Ray Structure Of Escherichia Coli Enoyl Reductase With Bound Nad And Benzo-Diazaborine Length = 261 | Back alignment and structure |
|
| >pdb|3EK2|A Chain A, Crystal Structure Of Eonyl-(Acyl Carrier Protein) Reductase From Burkholderia Pseudomallei 1719b Length = 271 | Back alignment and structure |
|
| >pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase From Shigella Flexneri 2a Str. 301 Length = 255 | Back alignment and structure |
|
| >pdb|3OJF|A Chain A, Crystal Structure Of The Bacillus Cereus Enoyl-Acyl Carrier Protein Reductase With Nadp+ And Indole Naphthyridinone (Complex Form) Length = 257 | Back alignment and structure |
|
| >pdb|3TL3|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 257 | Back alignment and structure |
|
| >pdb|1PWX|A Chain A, Crystal Structure Of The Haloalcohol Dehalogenase Hhec Complexed With Bromide Length = 254 | Back alignment and structure |
|
| >pdb|2QIO|A Chain A, X-Ray Structure Of Enoyl-Acyl Carrier Protein Reductase From Bacillus Anthracis With Triclosan Length = 256 | Back alignment and structure |
|
| >pdb|1MXF|A Chain A, Crystal Structure Of Inhibitor Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276 | Back alignment and structure |
|
| >pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319 | Back alignment and structure |
|
| >pdb|3K2E|A Chain A, Crystal Structure Of Enoyl-(Acyl-Carrier-Protein) Reductase From Anaplasma Phagocytophilum At 1.9a Resolution Length = 296 | Back alignment and structure |
|
| >pdb|3GRK|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Reductase Sdr Glucose-Ribitol Dehydrogenase From Brucella Melitensis Length = 293 | Back alignment and structure |
|
| >pdb|1MXH|A Chain A, Crystal Structure Of Substrate Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276 | Back alignment and structure |
|
| >pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250 | Back alignment and structure |
|
| >pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver Somniferum Length = 311 | Back alignment and structure |
|
| >pdb|4EIT|A Chain A, Crystal Structure Of An Enoyl-(Acyl Carrier Protein) Reductase From Bartonella Henselae Length = 276 | Back alignment and structure |
|
| >pdb|3I1J|A Chain A, Structure Of A Putative Short Chain Dehydrogenase From Pseudomonas Syringae Length = 247 | Back alignment and structure |
|
| >pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An Oxidoreductase, Complexed With Nadp+ At 2.6a Resolution Length = 252 | Back alignment and structure |
|
| >pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 In Complex With Nadp And Acetate. Length = 256 | Back alignment and structure |
|
| >pdb|2PD3|A Chain A, Crystal Structure Of The Helicobacter Pylori Enoyl-Acyl Carrier Protein Reductase In Complex With Hydroxydiphenyl Ether Compounds, Triclosan And Diclosan Length = 275 | Back alignment and structure |
|
| >pdb|3E9Q|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase From Shigella Flexneri Length = 273 | Back alignment and structure |
|
| >pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273 | Back alignment and structure |
|---|
Score = 392 bits (1010), Expect = e-139
Identities = 156/264 (59%), Positives = 207/264 (78%), Gaps = 1/264 (0%)
Query: 1 MSDFREQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK 60
M+ E RWSLKG TALVTGG+KGIGYA+VEELA GA V+TCSRNE EL++ ++ W+ K
Sbjct: 9 MNCNNEGRWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK 68
Query: 61 GLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMT 120
GL V GSVCDL R +R+KLM+TV+ FDGKLNIL+NNAG I KE +FTE+D++ +M
Sbjct: 69 GLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMG 128
Query: 121 TNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACE 180
TNFE+AYHLSQ+A+PLLK++ NGN+IF+SS+AG A+P S+Y++SK A+NQ+TK+LACE
Sbjct: 129 TNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACE 188
Query: 181 WAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHA-NRMVLRTPMLRPGEPNEVSSVVAFL 239
WAKD IRVN+VAP VI TPL++T K + + + +++TPM R G+P EVS+++AFL
Sbjct: 189 WAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFL 248
Query: 240 CLSATSYVTGQVICVDGGYSVTGF 263
C A SY+TGQ+I DGG++ G
Sbjct: 249 CFPAASYITGQIIWADGGFTANGG 272
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260 | Back alignment and structure |
|---|
Score = 386 bits (993), Expect = e-137
Identities = 140/255 (54%), Positives = 191/255 (74%)
Query: 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGS 67
RW+L+G TALVTGG++GIGY +VEELA+ GA V+TCSRN+ ELN + +W+SKG +V S
Sbjct: 4 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEAS 63
Query: 68 VCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAY 127
VCDL R++R++LM TV++ F GKLNIL+NNAG I KE ++T ED+S +M+ NFE+AY
Sbjct: 64 VCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAY 123
Query: 128 HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
HLS LAHP LK++ GN++FISSV+G +A+P ++Y ++K AM+QLT+ LA EWAKD IR
Sbjct: 124 HLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIR 183
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
VN V P VI T L++ +D E+ N+++ R + R GEP E++++VAFLC A SYV
Sbjct: 184 VNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYV 243
Query: 248 TGQVICVDGGYSVTG 262
TGQ+I VDGG
Sbjct: 244 TGQIIYVDGGLMANC 258
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266 | Back alignment and structure |
|---|
Score = 385 bits (991), Expect = e-137
Identities = 159/262 (60%), Positives = 198/262 (75%), Gaps = 4/262 (1%)
Query: 2 SDFREQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG 61
+ QRWSLK T LVTGGTKGIG+A+VEE A FGA++HTC+RNE ELN+ + +W+ KG
Sbjct: 3 GAEQSQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKG 62
Query: 62 LQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTT 121
QV+GSVCD +R +REKLM+TVSS F GKL+ILINN G K T ++T EDFS ++T
Sbjct: 63 FQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHIST 122
Query: 122 NFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEW 181
N ESAYHLSQLAHPLLK++G GNIIF+SS+AGV++ + SIY+++K A+NQL +NLACEW
Sbjct: 123 NLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEW 182
Query: 182 AKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCL 241
A D IR N VAP VI TPL + V D E ++ R P+ R GEP EVSS+VAFLC+
Sbjct: 183 ASDGIRANAVAPAVIATPLAEAVYDD----EFKKVVISRKPLGRFGEPEEVSSLVAFLCM 238
Query: 242 SATSYVTGQVICVDGGYSVTGF 263
A SY+TGQ ICVDGG +V GF
Sbjct: 239 PAASYITGQTICVDGGLTVNGF 260
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260 | Back alignment and structure |
|---|
Score = 250 bits (640), Expect = 1e-83
Identities = 81/255 (31%), Positives = 130/255 (50%), Gaps = 5/255 (1%)
Query: 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVS 65
E+R L+ ALVT T GIG A+ LA GA V SR + +++ + + +GL V+
Sbjct: 7 ERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVT 66
Query: 66 GSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTF-IPKETTEFTEEDFSTVMTTNFE 124
G+VC + RE+L+ + G ++IL++NA + TEE + ++ N +
Sbjct: 67 GTVCHVGKAEDRERLVAMAVNLH-GGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVK 125
Query: 125 SAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKD 184
+ +++ P ++ G G+++ +SSV P Y SK A+ LTKNLA E A
Sbjct: 126 ATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPR 185
Query: 185 KIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244
IRVN +AP +I+T + D E M + R G P + + +V+FLC
Sbjct: 186 NIRVNCLAPGLIKTNFSQVLWMDKARKE---YMKESLRIRRLGNPEDCAGIVSFLCSEDA 242
Query: 245 SYVTGQVICVDGGYS 259
SY+TG+ + V GG +
Sbjct: 243 SYITGETVVVGGGTA 257
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244 | Back alignment and structure |
|---|
Score = 245 bits (627), Expect = 6e-82
Identities = 77/253 (30%), Positives = 121/253 (47%), Gaps = 13/253 (5%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
+ G+ ALVTG KGIG V+ L A GA V +R ++L +E +
Sbjct: 4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE----CPGIEPVCV 59
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
DL EK + + G +++L+NNA I + E T+E F + N S + +
Sbjct: 60 DLGDWDATEKALGGI-----GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQV 114
Query: 130 SQLAHPLLKSAGN-GNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
SQ+ + + G G+I+ +SS+ + P Y+S+K AM LTK +A E KIRV
Sbjct: 115 SQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRV 174
Query: 189 NTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248
N+V P V+ T + V D F ++ R P+ + E +V + + FL ++ +
Sbjct: 175 NSVNPTVVLTDMGKKVSADPEFAR---KLKERHPLRKFAEVEDVVNSILFLLSDRSASTS 231
Query: 249 GQVICVDGGYSVT 261
G I VD GY +
Sbjct: 232 GGGILVDAGYLAS 244
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244 | Back alignment and structure |
|---|
Score = 243 bits (624), Expect = 2e-81
Identities = 75/250 (30%), Positives = 117/250 (46%), Gaps = 13/250 (5%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
L G LVTG KGIG V+ L A GA V SR + +L+ ++E +
Sbjct: 4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE----CPGIEPVCV 59
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
DL E+ + +V G +++L+NNA + + E T+E F N + +
Sbjct: 60 DLGDWEATERALGSV-----GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQV 114
Query: 130 SQLAHPLLKSAGN-GNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
SQ+ L + G G I+ +SS A+ S+Y S+K A++ LTK +A E KIRV
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRV 174
Query: 189 NTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248
N V P V+ T + D + + M+ R P+ + E V + + FL + T
Sbjct: 175 NAVNPTVVMTSMGQATWSDPHKAK---TMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTT 231
Query: 249 GQVICVDGGY 258
G + V+GG+
Sbjct: 232 GSTLPVEGGF 241
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281 | Back alignment and structure |
|---|
Score = 245 bits (627), Expect = 2e-81
Identities = 71/257 (27%), Positives = 119/257 (46%), Gaps = 8/257 (3%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN---QRIQEWKSKGLQVSG 66
S + T LVTGG GIG V L A GA V RN +L Q ++ + G +
Sbjct: 8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRY 67
Query: 67 SVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFES 125
D+ + + ++ V++ G+L+ +++ AG T+ E + + N
Sbjct: 68 EPTDITNEDETARAVDAVTAWH-GRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNG 126
Query: 126 AYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDK 185
++ + A + G G+ + ISS+A Y +K A++ L + A E
Sbjct: 127 TMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELGASW 186
Query: 186 IRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245
+RVN++ P +IRT L+ + + + + TP+ R GE +V+++ FL A S
Sbjct: 187 VRVNSIRPGLIRTDLVAAITESAELSS---DYAMCTPLPRQGEVEDVANMAMFLLSDAAS 243
Query: 246 YVTGQVICVDGGYSVTG 262
+VTGQVI VDGG +
Sbjct: 244 FVTGQVINVDGGQMLRR 260
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260 | Back alignment and structure |
|---|
Score = 242 bits (620), Expect = 1e-80
Identities = 77/257 (29%), Positives = 126/257 (49%), Gaps = 7/257 (2%)
Query: 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSG 66
++ L A+VTGG + IG A V LA GA V +E + +++ + +G VS
Sbjct: 7 EKLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSS 66
Query: 67 SVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPK-ETTEFTEEDFSTVMTTNFES 125
V D+ + + +V Q G+++IL+ AG I + + + T+ + + N
Sbjct: 67 VVMDVTNTESVQNAVRSVHEQE-GRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNG 125
Query: 126 AYHLSQLAHPLLKSAGNGNIIFISSVAGVIA--IPMCSIYASSKVAMNQLTKNLACEWAK 183
+ Q ++ G I+ I S++G+I + Y +SK ++Q ++LA EWA
Sbjct: 126 MFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAP 185
Query: 184 DKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243
IR N VAP I T L + + + TPM R G+P+EV+SVV FL A
Sbjct: 186 HGIRANAVAPTYIETTLTRFGMEKPELYD---AWIAGTPMGRVGQPDEVASVVQFLASDA 242
Query: 244 TSYVTGQVICVDGGYSV 260
S +TG ++ VD G++V
Sbjct: 243 ASLMTGAIVNVDAGFTV 259
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266 | Back alignment and structure |
|---|
Score = 240 bits (616), Expect = 5e-80
Identities = 79/253 (31%), Positives = 116/253 (45%), Gaps = 6/253 (2%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE-WKSKGLQVSGSV 68
L G AL+TG TKGIG + AA GA + R+ +EL+ + + G V
Sbjct: 17 RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVA 76
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYH 128
DL +L + F G L++L+NNAG P+ + + F + N +
Sbjct: 77 IDLAEPDAPAELARRAAEAF-GGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPAL 135
Query: 129 LSQLAHPLLKSAGN-GNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
L+ + +AG G II ++S A + +P Y +SK + TK LA E IR
Sbjct: 136 LASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIR 195
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
N+V P V+ T + V D M+ R P+ R P+EVS V +L A S +
Sbjct: 196 ANSVCPTVVLTEMGQRVWGDEAKSA---PMIARIPLGRFAVPHEVSDAVVWLASDAASMI 252
Query: 248 TGQVICVDGGYSV 260
G I VDGGY++
Sbjct: 253 NGVDIPVDGGYTM 265
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255 | Back alignment and structure |
|---|
Score = 236 bits (606), Expect = 2e-78
Identities = 81/250 (32%), Positives = 120/250 (48%), Gaps = 5/250 (2%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
L G TALVTG +G+G+A E LAA GA V T L + + KG G
Sbjct: 6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAF 65
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
D+ E + ++ ++ILINNAG K E E++ V+ TN SA+ +
Sbjct: 66 DVTDELAIEAAFSKLDAEG-IHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLV 124
Query: 130 SQLAHPLLKSAGN-GNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
S+ A + + + G II I S+ A P + Y ++K + LT ++A EWA+ I+
Sbjct: 125 SRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQT 184
Query: 189 NTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248
N + P I T + + +D F + TP R G P E+ FL A+ Y+
Sbjct: 185 NAIGPGYILTDMNTALIEDKQFDS---WVKSSTPSQRWGRPEELIGTAIFLSSKASDYIN 241
Query: 249 GQVICVDGGY 258
GQ+I VDGG+
Sbjct: 242 GQIIYVDGGW 251
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263 | Back alignment and structure |
|---|
Score = 235 bits (603), Expect = 4e-78
Identities = 73/257 (28%), Positives = 119/257 (46%), Gaps = 9/257 (3%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGSV 68
+ G A++TG + GIG A+ E A GA + +R L++ + K K G++V
Sbjct: 4 GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVA 63
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYH 128
D+ + ++E+V S F G +IL+NNAGT + E +E + +A
Sbjct: 64 VDVATPEGVDAVVESVRSSF-GGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVR 122
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
L++ P +++ G G II +S+ V + IY +K A+ +K LA E KD IRV
Sbjct: 123 LARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRV 182
Query: 189 NTVAPWVIRTPLL-----DTVEKDSNFLEHANR--MVLRTPMLRPGEPNEVSSVVAFLCL 241
N + P +I TP + + + + + P+ R P E+++ FLC
Sbjct: 183 NCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLCS 242
Query: 242 SATSYVTGQVICVDGGY 258
+Y G VDGG
Sbjct: 243 ERATYSVGSAYFVDGGM 259
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 235 bits (603), Expect = 5e-78
Identities = 91/261 (34%), Positives = 140/261 (53%), Gaps = 6/261 (2%)
Query: 1 MSDFREQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK 60
++ + L+G ALVTGG++G+G+ + + LA G V SRN E ++ Q+ K
Sbjct: 9 HHHHMKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEK 68
Query: 61 -GLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVM 119
G++ CD+ + +KL+E V +F GKL+ ++N AG EF ++F V+
Sbjct: 69 YGVETMAFRCDVSNYEEVKKLLEAVKEKF-GKLDTVVNAAGINRRHPAEEFPLDEFRQVI 127
Query: 120 TTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAG-VIAIPMCSIYASSKVAMNQLTKNLA 178
N Y++ + A LL+ + N +II I S+ + +P S YA+SK + LTK LA
Sbjct: 128 EVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALA 187
Query: 179 CEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAF 238
EW + IRVN +AP RT + + V D L+ M+ R P+ R G P ++ V F
Sbjct: 188 KEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLD---YMLKRIPLGRTGVPEDLKGVAVF 244
Query: 239 LCLSATSYVTGQVICVDGGYS 259
L YVTGQ+I VDGG++
Sbjct: 245 LASEEAKYVTGQIIFVDGGWT 265
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265 | Back alignment and structure |
|---|
Score = 235 bits (601), Expect = 9e-78
Identities = 71/268 (26%), Positives = 113/268 (42%), Gaps = 15/268 (5%)
Query: 1 MSDFREQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE--WK 58
M + L A+VTGG+ GIG A VE L GA V C+R+ L +
Sbjct: 1 MKPY-----DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQR 55
Query: 59 SKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTV 118
G ++ SVCD+ Q E G +IL+NNAG E T+E +S
Sbjct: 56 FPGARLFASVCDVLDALQVRAFAEACERTL-GCASILVNNAGQGRVSTFAETTDEAWSEE 114
Query: 119 MTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLA 178
+ F S H + P L+S + I+ ++S+ P ++++ + L +++A
Sbjct: 115 LQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMA 174
Query: 179 CEWAKDKIRVNTVAPWVIRTPLLDTV-------EKDSNFLEHANRMVLRTPMLRPGEPNE 231
E+A +RVN + ++ + E D + P+ R G+P E
Sbjct: 175 FEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIE 234
Query: 232 VSSVVAFLCLSATSYVTGQVICVDGGYS 259
+ + FL ++Y TG I V GG S
Sbjct: 235 AARAILFLASPLSAYTTGSHIDVSGGLS 262
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254 | Back alignment and structure |
|---|
Score = 234 bits (599), Expect = 1e-77
Identities = 76/253 (30%), Positives = 117/253 (46%), Gaps = 9/253 (3%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
L G A VTG GIG + AA GA + R L++ QE + V
Sbjct: 8 RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQE--LGAAVAARIVA 65
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
D+ + ++IL+N+AG + E + + VM N + +
Sbjct: 66 DVTDAEAMTAAAAEAEA--VAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWA 123
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSI--YASSKVAMNQLTKNLACEWAKDKIR 187
S+ + + G G I+ + S++G I Y +SK A++QLT+ LA EWA +R
Sbjct: 124 SRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVR 183
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
VN +AP + T + + + E + TPM R GEP+E+++ FL A SYV
Sbjct: 184 VNALAPGYVATEMTLKMRERPELFE---TWLDMTPMGRCGEPSEIAAAALFLASPAASYV 240
Query: 248 TGQVICVDGGYSV 260
TG ++ VDGGY+V
Sbjct: 241 TGAILAVDGGYTV 253
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255 | Back alignment and structure |
|---|
Score = 233 bits (597), Expect = 3e-77
Identities = 85/255 (33%), Positives = 124/255 (48%), Gaps = 6/255 (2%)
Query: 4 FREQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQ 63
F L G A++TG GIG + A GA V N N + E + G Q
Sbjct: 2 FNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ 61
Query: 64 VSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNF 123
CD+ + L + S+ GK++IL+NNAG PK + DF N
Sbjct: 62 AFACRCDITSEQELSALADFAISKL-GKVDILVNNAGGGGPK-PFDMPMADFRRAYELNV 119
Query: 124 ESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAK 183
S +HLSQL P ++ G G I+ I+S+A + YASSK A + L +N+A + +
Sbjct: 120 FSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGE 179
Query: 184 DKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243
IRVN +AP I T L +V E +M+ TP+ R G+P ++++ FLC A
Sbjct: 180 KNIRVNGIAPGAILTDALKSVITP----EIEQKMLQHTPIRRLGQPQDIANAALFLCSPA 235
Query: 244 TSYVTGQVICVDGGY 258
S+V+GQ++ V GG
Sbjct: 236 ASWVSGQILTVSGGG 250
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273 | Back alignment and structure |
|---|
Score = 233 bits (596), Expect = 8e-77
Identities = 75/252 (29%), Positives = 116/252 (46%), Gaps = 6/252 (2%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
SL G TA+VTG GIG A+ A GA V R + + + E G V
Sbjct: 28 SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTD-GVKEVADEIADGGGSAEAVVA 86
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
DL + E +++ ++++L+NNAG E + + V+T N ++A+ L
Sbjct: 87 DLADLEGAANVAEELAA--TRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVL 144
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
S+ + + G+G I+ I+S+ + YA+SK A+ LT+ LA EWA + VN
Sbjct: 145 SRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVN 204
Query: 190 TVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTG 249
+AP + T + D + R P R P ++ FL A SYV G
Sbjct: 205 ALAPGYVVTANTAALRADDERAA---EITARIPAGRWATPEDMVGPAVFLASDAASYVHG 261
Query: 250 QVICVDGGYSVT 261
QV+ VDGG+ +
Sbjct: 262 QVLAVDGGWLAS 273
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276 | Back alignment and structure |
|---|
Score = 232 bits (594), Expect = 2e-76
Identities = 79/256 (30%), Positives = 121/256 (47%), Gaps = 10/256 (3%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
SL G ALVTGG++GIG + + L GA V C+R+ + G
Sbjct: 26 SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPA 84
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
DL A +L + + +L+IL+NNAGT + + VM N S +
Sbjct: 85 DLSSEAGARRLAQALGELS-ARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSC 143
Query: 130 SQLAHPLLKSAGN----GNIIFISSVAGVIAIPMCSI-YASSKVAMNQLTKNLACEWAKD 184
Q PLL+ + + +I I SVAG+ A+ + Y SK A++QL++ LA E +
Sbjct: 144 IQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVGE 203
Query: 185 KIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244
I VN +AP + + + D LE PM R G P E++++ L +A
Sbjct: 204 HINVNVIAPGRFPSRMTRHIANDPQALE---ADSASIPMGRWGRPEEMAALAISLAGTAG 260
Query: 245 SYVTGQVICVDGGYSV 260
+Y+TG VI +DGG+ +
Sbjct: 261 AYMTGNVIPIDGGFHL 276
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276 | Back alignment and structure |
|---|
Score = 230 bits (589), Expect = 1e-75
Identities = 76/253 (30%), Positives = 123/253 (48%), Gaps = 10/253 (3%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
L G AL+TG + GIG V A GA V +R+ L E G + C
Sbjct: 29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRC 88
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
D+ Q +++ ++ + G ++I + NAG + + E+F + TN +
Sbjct: 89 DVTQPDQVRGMLDQMTGEL-GGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLT 147
Query: 130 SQLAHPLLKSAGN-GNIIFISSVAGVIAIP--MCSIYASSKVAMNQLTKNLACEWAKDKI 186
+Q A + G G II +S++G I S Y +SK A+ LTK +A E A +I
Sbjct: 148 AQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQI 207
Query: 187 RVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246
RVN+V+P IRT L++ + ++ + P+ R G P E++ + +L +A+SY
Sbjct: 208 RVNSVSPGYIRTELVEPLA------DYHALWEPKIPLGRMGRPEELTGLYLYLASAASSY 261
Query: 247 VTGQVICVDGGYS 259
+TG I +DGGY+
Sbjct: 262 MTGSDIVIDGGYT 274
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302 | Back alignment and structure |
|---|
Score = 229 bits (587), Expect = 3e-75
Identities = 63/255 (24%), Positives = 107/255 (41%), Gaps = 5/255 (1%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGSV 68
S +G A +TGG G+G + L++ GA SR L ++ S+ G +V
Sbjct: 23 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQ 82
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYH 128
CD++ + + + G NI+INNA T + + T+
Sbjct: 83 CDVRDPDMVQNTVSELIKVA-GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAF 141
Query: 129 LSQ-LAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
++ + L+K+ + I+++ AS+K + ++K+LA EW K +R
Sbjct: 142 VTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMR 201
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
N + P I+T + M+ R P R G E++++ AFLC S++
Sbjct: 202 FNVIQPGPIKTKG--AFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWI 259
Query: 248 TGQVICVDGGYSVTG 262
G VI DGG V
Sbjct: 260 NGAVIKFDGGEEVLI 274
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264 | Back alignment and structure |
|---|
Score = 228 bits (584), Expect = 4e-75
Identities = 54/254 (21%), Positives = 100/254 (39%), Gaps = 9/254 (3%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
L +++G +G + A GA + +R L ++ G + D
Sbjct: 9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTD 68
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHL 129
+ AQ L++ + G+++++INNA K T E + A L
Sbjct: 69 ITDDAQVAHLVDETMKAY-GRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRL 127
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
Q P L+ G ++ ++S+ + Y +K A+ +++ LA E + IRVN
Sbjct: 128 IQGFTPALE-ESKGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIRVN 186
Query: 190 TVAPWVIRTPLLDTVEKDSNFL------EHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243
+V P I L + + + N + + R +EV+S + F+
Sbjct: 187 SVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMASDL 246
Query: 244 TSYVTGQVICVDGG 257
S +TGQ + V+ G
Sbjct: 247 ASGITGQALDVNCG 260
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256 | Back alignment and structure |
|---|
Score = 226 bits (579), Expect = 1e-74
Identities = 87/253 (34%), Positives = 124/253 (49%), Gaps = 6/253 (2%)
Query: 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVS 65
E + L A+VTG GIG A+ A GA V + G +
Sbjct: 5 ESPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAI 64
Query: 66 GSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFES 125
G C++ RE +++ QF GK+ +L+NNAG PK + DF N S
Sbjct: 65 GLECNVTDEQHREAVIKAALDQF-GKITVLVNNAGGGGPK-PFDMPMSDFEWAFKLNLFS 122
Query: 126 AYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDK 185
+ LSQLA P ++ AG G I+ ISS+AG + Y SSK A+N LT+N+A +
Sbjct: 123 LFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMG 182
Query: 186 IRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245
IRVN +AP I+T L TV E M+ TP+ R GE ++++ FLC A +
Sbjct: 183 IRVNAIAPGAIKTDALATVLTP----EIERAMLKHTPLGRLGEAQDIANAALFLCSPAAA 238
Query: 246 YVTGQVICVDGGY 258
+++GQV+ V GG
Sbjct: 239 WISGQVLTVSGGG 251
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273 | Back alignment and structure |
|---|
Score = 226 bits (579), Expect = 2e-74
Identities = 75/251 (29%), Positives = 111/251 (44%), Gaps = 8/251 (3%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
L A++TG T GIG A + A GA V R + L+ I E G G D
Sbjct: 27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAE---IGGGAVGIQAD 83
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
A+ ++L E V ++ G++++L NAG E TEE + N +
Sbjct: 84 SANLAELDRLYEKVKAEA-GRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTV 142
Query: 131 QLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNT 190
Q A PLL A +++ S AG P S+YA+SK A+ +N + IR+NT
Sbjct: 143 QKALPLL--ARGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIRINT 200
Query: 191 VAPWVIRTPLLDTVEKDSNFL--EHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248
++P T L + N + + PM R G EV++ FL +S+VT
Sbjct: 201 LSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLASDDSSFVT 260
Query: 249 GQVICVDGGYS 259
G + VDGG +
Sbjct: 261 GAELFVDGGSA 271
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278 | Back alignment and structure |
|---|
Score = 227 bits (580), Expect = 3e-74
Identities = 82/263 (31%), Positives = 127/263 (48%), Gaps = 15/263 (5%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN---QRIQEWKSKGLQVSGS 67
A++TG + GIG A A GA V R+ L Q+I V+
Sbjct: 4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSV 63
Query: 68 VCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIP----KETTEFTEEDFSTVMTTNF 123
V D+ A +++++ T +F GKL+IL+NNAG IP K T + E + + N
Sbjct: 64 VADVTTDAGQDEILSTTLGKF-GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNL 122
Query: 124 ESAYHLSQLAHPLLKSAGNGNIIFISSVA-GVIAIPMCSIYASSKVAMNQLTKNLACEWA 182
S L++ A P L S G I+ ISS+A G+ A P Y+ +K A++Q T+N A +
Sbjct: 123 RSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLI 181
Query: 183 KDKIRVNTVAPWVIRTPLLDTV----EKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAF 238
+ IRVN+++P ++ T + E F M P G+P +++ V+AF
Sbjct: 182 QHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAF 241
Query: 239 LCLS-ATSYVTGQVICVDGGYSV 260
L +SY+ G + VDGG S+
Sbjct: 242 LADRKTSSYIIGHQLVVDGGSSL 264
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257 | Back alignment and structure |
|---|
Score = 225 bits (575), Expect = 6e-74
Identities = 66/256 (25%), Positives = 118/256 (46%), Gaps = 5/256 (1%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
++K ++TGG+ G+G + A GA V R + +L + E + Q+
Sbjct: 3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQM 62
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
D++ +K++E + +F G+++ILINNA + + +++V+ ++
Sbjct: 63 DVRNTDDIQKMIEQIDEKF-GRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYC 121
Query: 130 SQLAHP-LLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWA-KDKIR 187
SQ ++ GNII + + A P A++K + +TK LA EW K IR
Sbjct: 122 SQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIR 181
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
VN +AP I +K E A R + P+ R G P E++ + +LC +Y+
Sbjct: 182 VNAIAPGPIERT--GGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAAYI 239
Query: 248 TGQVICVDGGYSVTGF 263
G + +DGG + +
Sbjct: 240 NGTCMTMDGGQHLHQY 255
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239 | Back alignment and structure |
|---|
Score = 224 bits (574), Expect = 6e-74
Identities = 80/246 (32%), Positives = 122/246 (49%), Gaps = 15/246 (6%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR 74
ALVTGG++GIG A+ E L A G V SRN E ++ L DL+ +
Sbjct: 4 KALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEA--------AQSLGAVPLPTDLE-K 54
Query: 75 AQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAH 134
+ L++ G L++L++ A + K E + E++ V+ + + A+ L+Q A
Sbjct: 55 DDPKGLVKRALEAL-GGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAA 113
Query: 135 PLLKSAGNGNIIFISSVAGVIAIPMCSI--YASSKVAMNQLTKNLACEWAKDKIRVNTVA 192
P + AG G ++FI SV A I Y ++K A+ LT+ LA EWA+ IRVN +
Sbjct: 114 PHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLC 173
Query: 193 PWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVI 252
P + T + ++ E + R PM R P E++ V A LC Y+TGQ +
Sbjct: 174 PGYVETEFTLPLRQNPELYE---PITARIPMGRWARPEEIARVAAVLCGDEAEYLTGQAV 230
Query: 253 CVDGGY 258
VDGG+
Sbjct: 231 AVDGGF 236
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297 | Back alignment and structure |
|---|
Score = 225 bits (577), Expect = 1e-73
Identities = 69/261 (26%), Positives = 123/261 (47%), Gaps = 13/261 (4%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQ---VSGS 67
G + ++TG + GIG + A GA V RNE L + Q+ G+ ++
Sbjct: 24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAV 83
Query: 68 VCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPK--ETTEFTEEDFSTVMTTNFES 125
V D+ + ++ ++ T ++F GK++IL+NNAG + T+ E + NF++
Sbjct: 84 VADVTEASGQDDIINTTLAKF-GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQA 142
Query: 126 AYHLSQLAHPLLKSAGNGNIIFISS-VAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKD 184
++Q L G I+ +SS VAG A YA +K A++Q T+ A + +
Sbjct: 143 VIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQH 201
Query: 185 KIRVNTVAPWVIRTPLLDTV----EKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC 240
+RVN+V+P + T + + P+ G+P E+++++ FL
Sbjct: 202 GVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLA 261
Query: 241 -LSATSYVTGQVICVDGGYSV 260
+ +SY+ GQ I DGG ++
Sbjct: 262 DRNLSSYIIGQSIVADGGSTL 282
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262 | Back alignment and structure |
|---|
Score = 224 bits (573), Expect = 1e-73
Identities = 72/259 (27%), Positives = 116/259 (44%), Gaps = 13/259 (5%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
G LVTG IG A LA G + N L + + KG++ VCD
Sbjct: 5 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCD 64
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAG-TFIPKETTEFTEEDFSTVMTTNFESAYHL 129
+ +++V F GK++ L NNAG ++ +DF+ V+T N A+H+
Sbjct: 65 VTSEEAVIGTVDSVVRDF-GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHV 123
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
+ + + G I+ +S+AGV P + Y +SK A+ LT+ A + A IRVN
Sbjct: 124 LKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVN 183
Query: 190 TVAPWVIRTPLLDTVEKDSNFL-----------EHANRMVLRTPMLRPGEPNEVSSVVAF 238
++P + + + + A +M+ PM R G+ NE+ VVAF
Sbjct: 184 AISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAF 243
Query: 239 LCLSATSYVTGQVICVDGG 257
L +S++TG + + GG
Sbjct: 244 LLGDDSSFMTGVNLPIAGG 262
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254 | Back alignment and structure |
|---|
Score = 224 bits (573), Expect = 1e-73
Identities = 70/252 (27%), Positives = 119/252 (47%), Gaps = 3/252 (1%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
SLK +VTG GIG A+ ++ A +IV E LNQ +QE + G +V G
Sbjct: 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKA 63
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKE-TTEFTEEDFSTVMTTNFESAYH 128
D+ + E+ + + ++++L NNAG E ++E + V+ N SA++
Sbjct: 64 DVSKKKDVEEFVRRTFETY-SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFY 122
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
S+ P++ G G I+ +S+AG+ + Y +K + LT+++A + IR
Sbjct: 123 SSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRA 182
Query: 189 NTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248
V P ++T + K S L + R EP ++++V+ FL S+V
Sbjct: 183 VAVLPGTVKTNIGLGSSKPSELGMRT-LTKLMSLSSRLAEPEDIANVIVFLASDEASFVN 241
Query: 249 GQVICVDGGYSV 260
G + VDGG +V
Sbjct: 242 GDAVVVDGGLTV 253
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277 | Back alignment and structure |
|---|
Score = 224 bits (573), Expect = 2e-73
Identities = 71/261 (27%), Positives = 108/261 (41%), Gaps = 11/261 (4%)
Query: 1 MSDFREQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK 60
M+ L G A+VTG GIG AV LA G V + + +
Sbjct: 22 MNHPD-----LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI--- 73
Query: 61 GLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMT 120
G + D+ Q +++ + F G ++ L+ NAG + T EDF V+
Sbjct: 74 GCGAAACRVDVSDEQQIIAMVDACVAAF-GGVDKLVANAGVVHLASLIDTTVEDFDRVIA 132
Query: 121 TNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACE 180
N A+ ++ A P + G G I+ +SS+AG +A+ Y SK + QL++ A E
Sbjct: 133 INLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAE 192
Query: 181 WAKDKIRVNTVAPWVIRTPLLDTV--EKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAF 238
IR NT+ P + TP+ T D R ++ R P E++ +V F
Sbjct: 193 LRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVF 252
Query: 239 LCLSATSYVTGQVICVDGGYS 259
L S +TG DGG
Sbjct: 253 LLSDDASMITGTTQIADGGTI 273
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244 | Back alignment and structure |
|---|
Score = 222 bits (569), Expect = 4e-73
Identities = 71/256 (27%), Positives = 110/256 (42%), Gaps = 20/256 (7%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
S LVTGG+KGIG AVVE L +N IQ+ +
Sbjct: 1 SNAMANYLVTGGSKGIGKAVVELLLQNKNHTV--------INIDIQQ-SFSAENLKFIKA 51
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
DL + +++ + + + + NAG I + E V+ N S+ +
Sbjct: 52 DLTKQQDITNVLDII--KN-VSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYF 108
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
+ LK +I+F S IA P Y SK A+ Q+TK+LA + AK +IRVN
Sbjct: 109 IKGLENNLK--VGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVN 166
Query: 190 TVAPWVIRTPLLDTVEKDSNFL------EHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243
TV P + T L + + E + P+ R +P E++ +V FL
Sbjct: 167 TVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDK 226
Query: 244 TSYVTGQVICVDGGYS 259
+ ++TG +I +DGGY+
Sbjct: 227 SKFMTGGLIPIDGGYT 242
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266 | Back alignment and structure |
|---|
Score = 223 bits (570), Expect = 6e-73
Identities = 78/252 (30%), Positives = 122/252 (48%), Gaps = 14/252 (5%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
+G ALVTG GIG AVV L A GA V R + + D
Sbjct: 26 FEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADL-----------HLPGD 74
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
L+ A + L V++ G+L+I++NNAG TE T+ D+S + N E+ + +
Sbjct: 75 LREAAYADGLPGAVAAGL-GRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRIC 133
Query: 131 QLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNT 190
+ A PL+ +AG G I+ ++S G+ P ++Y +K A+ LT+ + + A IR+N
Sbjct: 134 RAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMGMDHAPQGIRINA 193
Query: 191 VAPWVIRTPLLDTVEKDSNFL--EHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248
V P + TP+L T F + P+ R EP +++ VV FL A Y+
Sbjct: 194 VCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLASDAARYLC 253
Query: 249 GQVICVDGGYSV 260
G ++ V+GG +V
Sbjct: 254 GSLVEVNGGKAV 265
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279 | Back alignment and structure |
|---|
Score = 223 bits (570), Expect = 7e-73
Identities = 70/254 (27%), Positives = 117/254 (46%), Gaps = 11/254 (4%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
SLKG A VTG + GIG+AV E A GA V + + K+ G+ C
Sbjct: 31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKC 90
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETT--EFTEEDFSTVMTTNFESAY 127
++ E+ + F G +++ + NAG + + ++ +++ + Y
Sbjct: 91 NISDPKSVEETISQQEKDF-GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVY 149
Query: 128 HLSQLAHPLLKSAGNGNIIFISSVAGVIAIP--MCSIYASSKVAMNQLTKNLACEWAKDK 185
+ S + K G G++I SS++G I + + Y ++K A L K+LA EWA
Sbjct: 150 YCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAP-F 208
Query: 186 IRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245
RVNT++P I T + D KD + TP+ R G E+ +L +A++
Sbjct: 209 ARVNTISPGYIDTDITDFASKDMK-----AKWWQLTPLGREGLTQELVGGYLYLASNAST 263
Query: 246 YVTGQVICVDGGYS 259
+ TG + +DGGY+
Sbjct: 264 FTTGSDVVIDGGYT 277
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277 | Back alignment and structure |
|---|
Score = 222 bits (569), Expect = 9e-73
Identities = 73/251 (29%), Positives = 120/251 (47%), Gaps = 5/251 (1%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
L +VTGG GIG A E A GA V NE + E G + G D
Sbjct: 25 LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANE---IGSKAFGVRVD 81
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
+ E ++E ++++ G++++L+NNAG EE + +M+ N + + S
Sbjct: 82 VSSAKDAESMVEKTTAKW-GRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCS 140
Query: 131 QLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNT 190
+ P+++ G G+II +S AI + Y +SK A++ LT+ +A + AK+ IRVN
Sbjct: 141 KYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAMAMDHAKEGIRVNA 200
Query: 191 VAPWVIRTPLLDTVEKDSNFLEHA-NRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTG 249
VAP I +P + ++ + R M R G E++ + FL + + TG
Sbjct: 201 VAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLASDRSRFATG 260
Query: 250 QVICVDGGYSV 260
++ VDGG S+
Sbjct: 261 SILTVDGGSSI 271
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255 | Back alignment and structure |
|---|
Score = 222 bits (567), Expect = 1e-72
Identities = 74/250 (29%), Positives = 108/250 (43%), Gaps = 8/250 (3%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
+G A+V GGT G+G A V L GA V RNE+ + + +E G +V D
Sbjct: 6 YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREE---FGPRVHALRSD 62
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
+ + L G +++L NAG + + +E + N + A+
Sbjct: 63 IADLNEIAVLGAAAGQTL-GAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTV 121
Query: 131 QLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNT 190
Q PL++ G+I+F SSVA P S+Y++SK A+ LA E IRVN+
Sbjct: 122 QRLTPLIR--EGGSIVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELLPRGIRVNS 179
Query: 191 VAPWVIRTPLLDTVEKDSNFLEH-ANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTG 249
V+P I TP TPM R G +EV+ V FL ++ TG
Sbjct: 180 VSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLA-FEATFTTG 238
Query: 250 QVICVDGGYS 259
+ VDGG
Sbjct: 239 AKLAVDGGLG 248
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277 | Back alignment and structure |
|---|
Score = 222 bits (568), Expect = 1e-72
Identities = 62/253 (24%), Positives = 111/253 (43%), Gaps = 4/253 (1%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE-WKSKGLQVSGSVC 69
L+ A +TGG GIG+ + E G SR+ + ++ + G +
Sbjct: 25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSM 84
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
D++ ++ +F G+++ILIN A + F TVM + +++
Sbjct: 85 DVRAPPAVMAAVDQALKEF-GRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNV 143
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
S++ + G I+ I++ G + S+K A++ +T++LA EW IRVN
Sbjct: 144 SRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVN 203
Query: 190 TVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTG 249
++AP I + + + + V +P+ R G E++ V +L SYVTG
Sbjct: 204 SLAPGPISGT--EGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYLASPLASYVTG 261
Query: 250 QVICVDGGYSVTG 262
V+ DGG +T
Sbjct: 262 AVLVADGGAWLTF 274
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256 | Back alignment and structure |
|---|
Score = 221 bits (566), Expect = 1e-72
Identities = 76/253 (30%), Positives = 119/253 (47%), Gaps = 8/253 (3%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
G LVTGG +GIG A+ + A GA+V C E + + Q D
Sbjct: 4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRP-EGKEVAEAIGGAFFQ-----VD 57
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
L+ +R + +E + G++++L+NNA P ++ V+ N + HLS
Sbjct: 58 LEDERERVRFVEEAAYAL-GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLS 116
Query: 131 QLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNT 190
LA ++ G G I+ ++SV G+ A + Y +SK + LT++LA + A +IRVN
Sbjct: 117 ALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNA 176
Query: 191 VAPWVIRTPLLDTVEKDSNFLEHANR-MVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTG 249
VAP I T + S E R + R G+P EV+ V FL S++TG
Sbjct: 177 VAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITG 236
Query: 250 QVICVDGGYSVTG 262
++ VDGG + +
Sbjct: 237 AILPVDGGMTASF 249
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280 | Back alignment and structure |
|---|
Score = 222 bits (567), Expect = 2e-72
Identities = 72/263 (27%), Positives = 126/263 (47%), Gaps = 15/263 (5%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL---QVSGS 67
T ++TG + GIG A GA V R+ L + Q G+ QV+
Sbjct: 4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV 63
Query: 68 VCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIP----KETTEFTEEDFSTVMTTNF 123
V D+ +++++ + QF GK+++L+NNAG IP T+ + + + N
Sbjct: 64 VADVTTEDGQDQIINSTLKQF-GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNL 122
Query: 124 ESAYHLSQLAHPLLKSAGNGNIIFISS-VAGVIAIPMCSIYASSKVAMNQLTKNLACEWA 182
++ +++ P L ++ G I+ +SS VAG A P YA +K A++Q T++ A + A
Sbjct: 123 QAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLA 181
Query: 183 KDKIRVNTVAPWVIRTPLLDTV----EKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAF 238
K IRVN+V+P ++ T + + + F P+ G+P +++++ F
Sbjct: 182 KFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILF 241
Query: 239 LCLS-ATSYVTGQVICVDGGYSV 260
L + Y+ GQ I DGG S+
Sbjct: 242 LADRNLSFYILGQSIVADGGTSL 264
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261 | Back alignment and structure |
|---|
Score = 219 bits (561), Expect = 1e-71
Identities = 77/258 (29%), Positives = 117/258 (45%), Gaps = 10/258 (3%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
SL+G AL+TG G G + + A GA V R++ + E L V
Sbjct: 6 SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAV---AA 62
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAG-TFIPKETTEFTEEDFSTVMTTNFESAYH 128
D+ A + +E S+F GK++IL+NNAG P+ E+F ++ N Y
Sbjct: 63 DISKEADVDAAVEAALSKF-GKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYL 121
Query: 129 LSQLAHPLLKSAGNG----NIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKD 184
++ P K G I+ ++S P + Y ++K + +TK LA E A
Sbjct: 122 MTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPA 181
Query: 185 KIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244
KIRV + P TPLL T + + E + PM R +P++++ AFLC
Sbjct: 182 KIRVVALNPVAGETPLLTTFMGEDSE-EIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQA 240
Query: 245 SYVTGQVICVDGGYSVTG 262
S +TG + VDGG S+ G
Sbjct: 241 SMITGVALDVDGGRSIGG 258
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271 | Back alignment and structure |
|---|
Score = 219 bits (561), Expect = 1e-71
Identities = 75/251 (29%), Positives = 112/251 (44%), Gaps = 10/251 (3%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
L+ A++TG GIG LA GA V ET+L G V D
Sbjct: 9 LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAAS---VGRGAVHHVVD 65
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKE--TTEFTEEDFSTVMTTNFESAYH 128
L L++ F G+L+I+ NNA P + T+ T + + T N
Sbjct: 66 LTNEVSVRALIDFTIDTF-GRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTML 124
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
+ + A P L SAG G I+ ISS A M + YA +K A+ LT+ +A ++ + +R
Sbjct: 125 MCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRC 184
Query: 189 NTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248
N +AP ++RTP L+ + R GEP+E++ +V FL +++T
Sbjct: 185 NAIAPGLVRTPRLEVGLPQ----PIVDIFATHHLAGRIGEPHEIAELVCFLASDRAAFIT 240
Query: 249 GQVICVDGGYS 259
GQVI D G
Sbjct: 241 GQVIAADSGLL 251
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261 | Back alignment and structure |
|---|
Score = 219 bits (560), Expect = 2e-71
Identities = 79/252 (31%), Positives = 127/252 (50%), Gaps = 6/252 (2%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
L+G ++TG + G+G ++ A A +V E E N ++E K G +
Sbjct: 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
D+ + + L+++ +F GKL+++INNAG P + E + D++ V+ TN A+
Sbjct: 65 DVTVESDVINLVQSAIKEF-GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLG 123
Query: 130 SQLAHP-LLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
S+ A +++ G +I +SSV I P+ YA+SK M +T+ LA E+A IRV
Sbjct: 124 SREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRV 183
Query: 189 NTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248
N + P I TP+ D + PM GEP E+++V A+L S SYVT
Sbjct: 184 NNIGPGAINTPINAEKFADPEQRA---DVESMIPMGYIGEPEEIAAVAAWLASSEASYVT 240
Query: 249 GQVICVDGGYSV 260
G + DGG ++
Sbjct: 241 GITLFADGGMTL 252
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283 | Back alignment and structure |
|---|
Score = 219 bits (561), Expect = 2e-71
Identities = 68/259 (26%), Positives = 107/259 (41%), Gaps = 8/259 (3%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
+ AL+TG GIG A LAA G V R TE+ + E G Q
Sbjct: 25 NQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEA 84
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYH 128
D+ Q + + +F G L+I++ NAG + ++ + N +
Sbjct: 85 DVSDELQMRNAVRDLVLKF-GHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFL 143
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGV--IAIPMCSIYASSKVAMNQLTKNLACEWAKDKI 186
L P LK G G I+ +SS+ G P + Y ++K A + + LA E K I
Sbjct: 144 TLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHI 203
Query: 187 RVNTVAPWVIRTPLLD----TVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS 242
RVN V P I T + D E+++ + + +PG +V+ ++ FL
Sbjct: 204 RVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSE 263
Query: 243 ATSYVTGQVICVDGGYSVT 261
+VTG + +DGG +
Sbjct: 264 RARHVTGSPVWIDGGQGLL 282
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258 | Back alignment and structure |
|---|
Score = 218 bits (558), Expect = 3e-71
Identities = 70/250 (28%), Positives = 118/250 (47%), Gaps = 5/250 (2%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
+ ALVTG ++G+G A LA G IV +R++ + +E + G++V
Sbjct: 2 EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKA 61
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
++ A+ +++ + + F G+L++ +NNA + + + E E + M N ++
Sbjct: 62 NVGQPAKIKEMFQQIDETF-GRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFC 120
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
+Q A L++ G G+I+ ISS+ + + + SK A+ LT+ LA E + +I VN
Sbjct: 121 AQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVN 180
Query: 190 TVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTG 249
V+ I T L + LE TP R E ++ V FL S + G
Sbjct: 181 AVSGGAIDTDALKHFPNREDLLE---DARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRG 237
Query: 250 QVICVDGGYS 259
Q I VDGG S
Sbjct: 238 QTIIVDGGRS 247
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250 | Back alignment and structure |
|---|
Score = 217 bits (556), Expect = 4e-71
Identities = 71/251 (28%), Positives = 110/251 (43%), Gaps = 8/251 (3%)
Query: 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE-WKSKGLQVSGSVCDL 71
A+VTG + G G A+ A G V + L + + W + +V D+
Sbjct: 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADV 61
Query: 72 KIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETT---EFTEEDFSTVMTTNFESAYH 128
+ QF G +++L+NNAG E E F VM N +
Sbjct: 62 ADEGDVNAAIAATMEQF-GAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFL 120
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
+ P + G G I+ I+SVA ++A P S Y +SK A+ QLTK++A ++A IR
Sbjct: 121 GCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRC 180
Query: 189 NTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248
N V P +I TP+ E ++++ R P G +V+ V FL +YV
Sbjct: 181 NAVCPGMIETPMTQWRLDQP---ELRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVN 237
Query: 249 GQVICVDGGYS 259
G + +DG Y+
Sbjct: 238 GAALVMDGAYT 248
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280 | Back alignment and structure |
|---|
Score = 218 bits (559), Expect = 4e-71
Identities = 74/253 (29%), Positives = 109/253 (43%), Gaps = 4/253 (1%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
L+G A+VTG + GIG A A GA V +RN L + E G + + D
Sbjct: 6 LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGD 65
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHL 129
+ A E L+E +F G L+ NNAG E + + E + + TN SA+
Sbjct: 66 VGDEALHEALVELAVRRF-GGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLA 124
Query: 130 SQLAHPLLKSAGNGNIIFISSVAG-VIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
++ P + + G G++ F SS G + YA+SK + L + LA E IRV
Sbjct: 125 AKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIRV 184
Query: 189 NTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248
N + P TP + E + + R P E++ +L S+VT
Sbjct: 185 NALLPGGTDTPANFANLPGAAP-ETRGFVEGLHALKRIARPEEIAEAALYLASDGASFVT 243
Query: 249 GQVICVDGGYSVT 261
G + DGG SVT
Sbjct: 244 GAALLADGGASVT 256
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265 | Back alignment and structure |
|---|
Score = 218 bits (557), Expect = 4e-71
Identities = 73/264 (27%), Positives = 117/264 (44%), Gaps = 15/264 (5%)
Query: 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE-WKSKGLQV 64
S T +VTGG +GIG A +AA GA V R+ + + ++ K G++
Sbjct: 7 GFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKT 66
Query: 65 SGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFE 124
CD+ K ++ + + G ++ LI NAG + K TE T EDF+ V N
Sbjct: 67 KAYQCDVSNTDIVTKTIQQIDADL-GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVF 125
Query: 125 SAYHLSQ-LAHPLLKSAGNGNIIFISSVAGVIAI-------PMCSIYASSKVAMNQLTKN 176
++ + +A L+ G+I+ SS++ I Y SSK A + L K
Sbjct: 126 GVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKG 185
Query: 177 LACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVV 236
LA EWA IRVN ++P + T ++K + + P+ R +P E++
Sbjct: 186 LAAEWASAGIRVNALSPGYVNTDQTAHMDK-----KIRDHQASNIPLNRFAQPEEMTGQA 240
Query: 237 AFLCLSATSYVTGQVICVDGGYSV 260
L +Y+TG +DGG +
Sbjct: 241 ILLLSDHATYMTGGEYFIDGGQLI 264
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251 | Back alignment and structure |
|---|
Score = 217 bits (555), Expect = 6e-71
Identities = 75/252 (29%), Positives = 123/252 (48%), Gaps = 9/252 (3%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
L G A++TGGT GIG A+ + GA V R+ + + + Q+ D
Sbjct: 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD-QIQFFQHD 62
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
KL + F G ++ L+NNAG + K E T ++ ++ N + + +
Sbjct: 63 SSDEDGWTKLFDATEKAF-GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGT 121
Query: 131 QLAHPLLKSAGNG-NIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWA--KDKIR 187
+L +K+ G G +II +SS+ G + P Y +SK A+ ++K+ A + A +R
Sbjct: 122 RLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVR 181
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
VNTV P I+TPL+D + E A +TPM GEPN+++ + +L + + +
Sbjct: 182 VNTVHPGYIKTPLVDDLPGA----EEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFA 237
Query: 248 TGQVICVDGGYS 259
TG VDGGY+
Sbjct: 238 TGSEFVVDGGYT 249
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254 | Back alignment and structure |
|---|
Score = 216 bits (554), Expect = 1e-70
Identities = 75/251 (29%), Positives = 115/251 (45%), Gaps = 10/251 (3%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
L G T ++TGG +G+G + A GA V + E +E G D
Sbjct: 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARE---LGDAARYQHLD 59
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
+ I ++++ +F G ++ L+NNAG + E F V+ N +
Sbjct: 60 VTIEEDWQRVVAYAREEF-GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGM 118
Query: 131 QLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNT 190
+ P +K AG G+I+ ISS AG++ + + S Y +SK + L+K A E D+IRVN+
Sbjct: 119 KTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNS 178
Query: 191 VAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPG-EPNEVSSVVAFLCLSATSYVTG 249
V P + TP+ TPM R G EP E++ V L +SYVTG
Sbjct: 179 VHPGMTYTPMTAETGIRQ-----GEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTG 233
Query: 250 QVICVDGGYSV 260
+ VDGG++
Sbjct: 234 AELAVDGGWTT 244
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 217 bits (554), Expect = 1e-70
Identities = 74/255 (29%), Positives = 119/255 (46%), Gaps = 7/255 (2%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL--QVSGSV 68
L+TGG G+G A LAA GA + + L +V +V
Sbjct: 11 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTV 70
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAY 127
D+ AQ E + + +F G+++ NNAG T FT +F V++ N +
Sbjct: 71 ADVSDEAQVEAYVTATTERF-GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVF 129
Query: 128 HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
+ +++ G+G ++ +SV G+ I S YA++K + LT+N A E+ + IR
Sbjct: 130 LGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIR 189
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFL---EHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244
+N +AP I TP+++ K + + A + P R GE E+++VVAFL
Sbjct: 190 INAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDA 249
Query: 245 SYVTGQVICVDGGYS 259
SYV V+ +DGG S
Sbjct: 250 SYVNATVVPIDGGQS 264
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270 | Back alignment and structure |
|---|
Score = 216 bits (552), Expect = 3e-70
Identities = 74/252 (29%), Positives = 119/252 (47%), Gaps = 9/252 (3%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
G +VTGG +GIG +V GA V C ++E+ QE +CD
Sbjct: 7 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQE----LPGAVFILCD 62
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHL 129
+ + L+ +F G+L+ ++NNAG P + E + + F ++ N Y L
Sbjct: 63 VTQEDDVKTLVSETIRRF-GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTL 121
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
++LA P L+ GN+I ISS+ G I Y ++K A+ +TK LA + + +RVN
Sbjct: 122 TKLALPYLR-KSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVN 180
Query: 190 TVAPWVIRTPLLDTV-EKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248
++P I TPL + + + +L P+ R G+P EV + FL S ++ T
Sbjct: 181 CISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLA-SEANFCT 239
Query: 249 GQVICVDGGYSV 260
G + V GG +
Sbjct: 240 GIELLVTGGAEL 251
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263 | Back alignment and structure |
|---|
Score = 215 bits (550), Expect = 4e-70
Identities = 73/255 (28%), Positives = 114/255 (44%), Gaps = 11/255 (4%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
L G A+VTGG+KGIG A+ L GA V + + ++ G V
Sbjct: 9 DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAV---EV 65
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
D+ RA + M+ G ++L NAG + + T+E++ N +
Sbjct: 66 DVTKRASVDAAMQKAIDAL-GGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLA 124
Query: 130 SQLAHPLLKSAGN-GNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
+Q+A ++ G I+ +S+A + P+ + Y++SK A+ T+ LA E A IRV
Sbjct: 125 NQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRV 184
Query: 189 NTVAPWVIRTPLLDTVEKDSNFLEHA------NRMVLRTPMLRPGEPNEVSSVVAFLCLS 242
N V P ++T + + L V TP+ R EP +V+ VV FL
Sbjct: 185 NCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLASD 244
Query: 243 ATSYVTGQVICVDGG 257
A ++TGQ I V GG
Sbjct: 245 AARFMTGQGINVTGG 259
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260 | Back alignment and structure |
|---|
Score = 215 bits (550), Expect = 5e-70
Identities = 75/249 (30%), Positives = 119/249 (47%), Gaps = 14/249 (5%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
L G ALV+GG +G+G + V + A GA V + E E D
Sbjct: 5 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL---ADAARYVHLD 61
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
+ AQ + ++T + F G L++L+NNAG ++ ++ ++ N +
Sbjct: 62 VTQPAQWKAAVDTAVTAF-GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGI 120
Query: 131 QLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNT 190
+ +K AG G+II ISS+ G+ C Y ++K A+ LTK+ A E IRVN+
Sbjct: 121 RAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNS 180
Query: 191 VAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQ 250
+ P +++TP+ D V +D + +T + R EP EVS++V +L +SY TG
Sbjct: 181 IHPGLVKTPMTDWVPED----------IFQTALGRAAEPVEVSNLVVYLASDESSYSTGA 230
Query: 251 VICVDGGYS 259
VDGG
Sbjct: 231 EFVVDGGTV 239
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255 | Back alignment and structure |
|---|
Score = 214 bits (548), Expect = 6e-70
Identities = 76/255 (29%), Positives = 120/255 (47%), Gaps = 9/255 (3%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
+LKG TALVTG T GIG + + LA GA + + + E G++
Sbjct: 1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPA--PALAEIARHGVKAVHHPA 58
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
DL AQ E L +F G ++IL+NNAG +F E + ++ N + +H
Sbjct: 59 DLSDVAQIEALFALAEREF-GGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHG 117
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
++LA P +++ G II I+SV G++ + Y ++K + LTK + E A + N
Sbjct: 118 TRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCN 177
Query: 190 TVAPWVIRTPLL-----DTVEKDSNFLEHANRMVL-RTPMLRPGEPNEVSSVVAFLCLSA 243
+ P + TPL+ D + L+ + ++ + P L P + +V FLC A
Sbjct: 178 AICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEA 237
Query: 244 TSYVTGQVICVDGGY 258
S V G VDGG+
Sbjct: 238 GSQVRGAAWNVDGGW 252
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264 | Back alignment and structure |
|---|
Score = 215 bits (549), Expect = 7e-70
Identities = 70/256 (27%), Positives = 119/256 (46%), Gaps = 19/256 (7%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
L+ +VTG + GIG A+ E G+ V S ++ + CD
Sbjct: 6 LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHD-----------PGEAKYDHIECD 54
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
+ Q + ++ + ++ G +++L+NNAG + + ++ ++ N Y+ S
Sbjct: 55 VTNPDQVKASIDHIFKEY-GSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYAS 113
Query: 131 QLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNT 190
+ A P + + + +I+ ISSV I S Y +SK A+ LTK++A ++A +R N
Sbjct: 114 KFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAP-LLRCNA 172
Query: 191 VAPWVIRTPLLDTVEKDSNFL------EHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244
V P I TPL+ + + + PM R G+P EV+S VAFL
Sbjct: 173 VCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASREA 232
Query: 245 SYVTGQVICVDGGYSV 260
S++TG + VDGG S+
Sbjct: 233 SFITGTCLYVDGGLSI 248
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260 | Back alignment and structure |
|---|
Score = 214 bits (548), Expect = 8e-70
Identities = 74/256 (28%), Positives = 116/256 (45%), Gaps = 10/256 (3%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS--KGLQVSGS 67
++G A+VT G+ G+G+A ELA GA + SRN +L S G QV
Sbjct: 4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIV 63
Query: 68 VCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAY 127
D++ ++L E G +IL+ + G P E ED+ SA
Sbjct: 64 AGDIREPGDIDRLFEKARD--LGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAV 121
Query: 128 HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
+ + A + G G +++I SV + ++ ++ + + + LA E A +
Sbjct: 122 WVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVT 181
Query: 188 VNTVAPWVIRTPLLDTVEKDS------NFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCL 241
VN V P +I T + ++ ++ E M R PM R G+P E++SVVAFL
Sbjct: 182 VNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFLAS 241
Query: 242 SATSYVTGQVICVDGG 257
S++TG VI VDGG
Sbjct: 242 EKASFITGAVIPVDGG 257
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269 | Back alignment and structure |
|---|
Score = 215 bits (549), Expect = 9e-70
Identities = 76/255 (29%), Positives = 124/255 (48%), Gaps = 18/255 (7%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
A+VTGG+ GIG AVV+ L +GA V + S +E +K D
Sbjct: 12 FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFK----------ID 61
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
+ + ++ +E + ++ G+++IL+NNAG E + ++ N +Y ++
Sbjct: 62 VTNEEEVKEAVEKTTKKY-GRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMA 120
Query: 131 QLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNT 190
+ P++ + G+G+II I+SV A + Y +SK A+ LT+++A ++A KIR N
Sbjct: 121 KYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIRCNA 179
Query: 191 VAPWVIRTPLLDTVEKDSNFL------EHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244
V P I TP++ K + PM R G P EV+ VVAFL +
Sbjct: 180 VCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDRS 239
Query: 245 SYVTGQVICVDGGYS 259
S++TG + VDGG
Sbjct: 240 SFITGACLTVDGGLL 254
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259 | Back alignment and structure |
|---|
Score = 213 bits (546), Expect = 1e-69
Identities = 66/254 (25%), Positives = 103/254 (40%), Gaps = 11/254 (4%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
L+G +AL+TG +GIG A E GA V + Q E G D
Sbjct: 6 LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAE---IGPAAYAVQMD 62
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
+ + + + G L+IL+NNA F E T E + + N
Sbjct: 63 VTRQDSIDAAIAATVEHA-GGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTL 121
Query: 131 QLAHPLLKSAGN-GNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
Q A + + G G II ++S AG + +IY ++K A+ LT++ + K +I VN
Sbjct: 122 QAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRINVN 181
Query: 190 TVAPWVIRTPLLDTVEKDSNFL------EHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243
+AP V+ D V+ E + P R G +++ + FL +
Sbjct: 182 AIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLASAE 241
Query: 244 TSYVTGQVICVDGG 257
+ Y+ Q VDGG
Sbjct: 242 SDYIVSQTYNVDGG 255
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303 | Back alignment and structure |
|---|
Score = 215 bits (549), Expect = 2e-69
Identities = 77/258 (29%), Positives = 117/258 (45%), Gaps = 8/258 (3%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE-----WKSKGLQV 64
L+G A+VTGG GIG A+V+EL G+ V SR L E +K +V
Sbjct: 15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARV 74
Query: 65 SGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFE 124
C+++ + L+++ F GK+N L+NN G + + + V+ TN
Sbjct: 75 IPIQCNIRNEEEVNNLVKSTLDTF-GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLT 133
Query: 125 SAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKD 184
+++ + + G+I+ I P+ +++ + LTK+LA EWA
Sbjct: 134 GTFYMCKAVYSSWMKEHGGSIVNIIVP-TKAGFPLAVHSGAARAGVYNLTKSLALEWACS 192
Query: 185 KIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244
IR+N VAP VI + + P R G P EVSSVV FL A
Sbjct: 193 GIRINCVAPGVIYSQTAVENYGSWG-QSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAA 251
Query: 245 SYVTGQVICVDGGYSVTG 262
S++TGQ + VDGG S+
Sbjct: 252 SFITGQSVDVDGGRSLYT 269
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244 | Back alignment and structure |
|---|
Score = 212 bits (543), Expect = 3e-69
Identities = 52/247 (21%), Positives = 92/247 (37%), Gaps = 10/247 (4%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR 74
ALVT G A VE L G V + + +R + +
Sbjct: 3 IALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRF---ESENPGTIALA---E 56
Query: 75 AQREKLMETVSSQFDGKLNILINNAGTFIPKETT---EFTEEDFSTVMTTNFESAYHLSQ 131
+ E+L++ ++ +++N P +E D + L Q
Sbjct: 57 QKPERLVDATLQHG-EAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQ 115
Query: 132 LAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTV 191
A L++AG ++IFI+S G + +Y ++ A L ++ A ++D I + +
Sbjct: 116 SAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGILLYAI 175
Query: 192 APWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQV 251
P P N E R+ P+ R G P+E+ +++ FL + + GQ
Sbjct: 176 GPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFLASRRAAPIVGQF 235
Query: 252 ICVDGGY 258
GGY
Sbjct: 236 FAFTGGY 242
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281 | Back alignment and structure |
|---|
Score = 212 bits (542), Expect = 1e-68
Identities = 69/259 (26%), Positives = 122/259 (47%), Gaps = 10/259 (3%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE--WKSKGLQVSGS 67
S+ TA++TG T GIG A+ LA GA + + + + + V
Sbjct: 22 SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHH 81
Query: 68 VCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAY 127
D+ ++ +M V+ +F G +IL+NNAG ++ +F E + ++ N S++
Sbjct: 82 PADMTKPSEIADMMAMVADRF-GGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSF 140
Query: 128 HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
H + A P +K G G II I+S G++A P S Y ++K + LTK +A E A+ +
Sbjct: 141 HTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALEVAESGVT 200
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANR-------MVLRTPMLRPGEPNEVSSVVAFLC 240
VN++ P + TPL++ D M+ P + +V+S+ +L
Sbjct: 201 VNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLALYLA 260
Query: 241 LSATSYVTGQVICVDGGYS 259
+ +TG + +DGG++
Sbjct: 261 GDDAAQITGTHVSMDGGWT 279
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267 | Back alignment and structure |
|---|
Score = 211 bits (539), Expect = 2e-68
Identities = 70/259 (27%), Positives = 118/259 (45%), Gaps = 13/259 (5%)
Query: 7 QRWSLKGMTALVTG--GTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQE-WKSKGL 62
+ SLKG +VTG G KG+G A GA + T + + ++E K+ G+
Sbjct: 14 DQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGI 73
Query: 63 QVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTN 122
+ C + EKL++ V + F G+++ I NAG + + E ++ V+ +
Sbjct: 74 KAKAYKCQVDSYESCEKLVKDVVADF-GQIDAFIANAGATADSGILDGSVEAWNHVVQVD 132
Query: 123 FESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA-IPMC-SIYASSKVAMNQLTKNLACE 180
+H ++ K G G+++ +S++G IA P + Y +K + ++LA E
Sbjct: 133 LNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANE 192
Query: 181 WAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC 240
W RVN+++P I T L D V K E PM R G E+ +
Sbjct: 193 WRD-FARVNSISPGYIDTGLSDFVPK-----ETQQLWHSMIPMGRDGLAKELKGAYVYFA 246
Query: 241 LSATSYVTGQVICVDGGYS 259
A++Y TG + +DGGY+
Sbjct: 247 SDASTYTTGADLLIDGGYT 265
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267 | Back alignment and structure |
|---|
Score = 210 bits (538), Expect = 3e-68
Identities = 72/261 (27%), Positives = 119/261 (45%), Gaps = 17/261 (6%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQ--VSGS 67
LKG TALVTG T GIG A+ L A GA V R E +N+ I+E +++ +
Sbjct: 7 QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPV 66
Query: 68 VCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAY 127
V DL + ++E K++ILINN G F P E + +ED+ + N S
Sbjct: 67 VADLGTEQGCQDVIEKY-----PKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGV 121
Query: 128 HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
L++ + G +IFI+S A ++ + Y+++K L+++LA +
Sbjct: 122 RLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAELTTGTNVT 181
Query: 188 VNTVAPWVIRTPLL-----DTVEKDSNFLEHANRMVLRT-----PMLRPGEPNEVSSVVA 237
VNT+ P T + + +E A + ++ + R P E++ +V
Sbjct: 182 VNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHLVT 241
Query: 238 FLCLSATSYVTGQVICVDGGY 258
FL +S + G + +DGG
Sbjct: 242 FLSSPLSSAINGSALRIDGGL 262
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281 | Back alignment and structure |
|---|
Score = 210 bits (537), Expect = 7e-68
Identities = 70/265 (26%), Positives = 114/265 (43%), Gaps = 19/265 (7%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
L G AL+TGG G+G A+V+ A GA V ++ L + G G V D
Sbjct: 3 LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVA---HGGNAVGVVGD 59
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAG-----TFIPKETTEFTEEDFSTVMTTNFES 125
++ +++ E + F GK++ LI NAG T + + + F + N +
Sbjct: 60 VRSLQDQKRAAERCLAAF-GKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKG 118
Query: 126 AYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDK 185
H + P L S+ G+++F S AG +Y ++K A+ L + +A E A
Sbjct: 119 YIHAVKACLPALVSSR-GSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAP-H 176
Query: 186 IRVNTVAPWVIRTPLLDTV-----EKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC 240
+RVN VAP + T L E+ + + A+ + P+ R E + F
Sbjct: 177 VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVFFA 236
Query: 241 LS--ATSYVTGQVICVDGGYSVTGF 263
+ + TG ++ DGG V GF
Sbjct: 237 -TRGDSLPATGALLNYDGGMGVRGF 260
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260 | Back alignment and structure |
|---|
Score = 209 bits (535), Expect = 7e-68
Identities = 46/259 (17%), Positives = 102/259 (39%), Gaps = 17/259 (6%)
Query: 4 FREQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQ 63
+ + +L L+TG ++ +G L G V R E +++ + L
Sbjct: 18 YFQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALY 77
Query: 64 VSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNF 123
D ++ + +Q L +++NA ++ + E ++F+ + + +
Sbjct: 78 -----GDFSCETGIMAFIDLLKTQT-SSLRAVVHNASEWLAETPGE-EADNFTRMFSVHM 130
Query: 124 ESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAK 183
+ Y ++ PLL ++ +I+ IS Y ++K + LT + A +A
Sbjct: 131 LAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARFA- 189
Query: 184 DKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243
++VN +AP ++ D + + ++ + + + +L +
Sbjct: 190 PLVKVNGIAPALLMFQPKDD-------AAYRANALAKSALGIEPGAEVIYQSLRYLL-DS 241
Query: 244 TSYVTGQVICVDGGYSVTG 262
+YVTG + V+GG V G
Sbjct: 242 -TYVTGTTLTVNGGRHVKG 259
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258 | Back alignment and structure |
|---|
Score = 208 bits (532), Expect = 2e-67
Identities = 73/254 (28%), Positives = 122/254 (48%), Gaps = 10/254 (3%)
Query: 13 GMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
A+VTGG +GIG + E+LAA G V + E + + I+ ++ + D
Sbjct: 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLD 61
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
+ +A + ++ + + G ++L+NNAG K E TEED + + N S +
Sbjct: 62 VTDKANFDSAIDEAAEKL-GGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGI 120
Query: 131 QLAHPLLKSAGN-GNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
Q A G G II +S+A + P+ S Y+++K A+ LT+ A E A VN
Sbjct: 121 QAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVN 180
Query: 190 TVAPWVIRTPLLDTVEKD------SNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243
AP ++ T + + ++ + E+ + RP P +V+ +V+FL
Sbjct: 181 AYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLASEN 240
Query: 244 TSYVTGQVICVDGG 257
++YVTGQV+ VDGG
Sbjct: 241 SNYVTGQVMLVDGG 254
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253 | Back alignment and structure |
|---|
Score = 208 bits (531), Expect = 3e-67
Identities = 76/254 (29%), Positives = 113/254 (44%), Gaps = 7/254 (2%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
L+G ALVTGG G+G VV+ L GA V NE Q E G + D
Sbjct: 4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHD 60
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
+ A +M V + G LN+L+NNAG +P + EDFS ++ N ES +
Sbjct: 61 VSSEADWTLVMAAVQRRL-GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGC 119
Query: 131 QLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKD--KIRV 188
Q +K G G+II ++SV+ + I + Y++SK A++ LT+ A K IRV
Sbjct: 120 QQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRV 178
Query: 189 NTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248
N++ P I TP++ E R P ++ +V FL +S ++
Sbjct: 179 NSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMS 238
Query: 249 GQVICVDGGYSVTG 262
G + D G
Sbjct: 239 GSELHADNSILGMG 252
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260 | Back alignment and structure |
|---|
Score = 207 bits (529), Expect = 6e-67
Identities = 77/258 (29%), Positives = 121/258 (46%), Gaps = 10/258 (3%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE--WKSKGLQVSGSV 68
LKG A+VTG T GIG + LAA GA + + ++++ G++V
Sbjct: 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYH 128
DL L++ Q G+++IL+NNAG +F E + ++ N + +H
Sbjct: 62 ADLSKGEAVRGLVDNAVRQM-GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFH 120
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
+ A P +K G G II I+S G++A S Y ++K + TK A E A I
Sbjct: 121 GTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITA 180
Query: 189 NTVAPWVIRTPLL-----DTVEKDSNFLEHANRMVL--RTPMLRPGEPNEVSSVVAFLCL 241
N + P +RTPL+ EK+ E A R +L + P L+ P ++ FL
Sbjct: 181 NAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLAS 240
Query: 242 SATSYVTGQVICVDGGYS 259
A + +TG + VDGG++
Sbjct: 241 DAAAQITGTTVSVDGGWT 258
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250 | Back alignment and structure |
|---|
Score = 206 bits (527), Expect = 9e-67
Identities = 63/258 (24%), Positives = 107/258 (41%), Gaps = 16/258 (6%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
G VTG KGIGYA GA V + T+ + + V
Sbjct: 4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ----------EQYPFATEVM 53
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
D+ AQ ++ + + ++ +L+ L+N AG T + ++ED+ N A++L
Sbjct: 54 DVADAAQVAQVCQRLLAET-ERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNL 112
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
Q + G I+ ++S A S Y +SK A+ L ++ E A +R N
Sbjct: 113 FQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRCN 172
Query: 190 TVAPWVIRTPLLDTVEKDSNFLEHA-----NRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244
V+P T + T+ + E + L P+ + P E+++ + FL
Sbjct: 173 VVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDLA 232
Query: 245 SYVTGQVICVDGGYSVTG 262
S++T Q I VDGG ++
Sbjct: 233 SHITLQDIVVDGGSTLGA 250
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254 | Back alignment and structure |
|---|
Score = 206 bits (526), Expect = 1e-66
Identities = 63/253 (24%), Positives = 111/253 (43%), Gaps = 15/253 (5%)
Query: 13 GMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
G LVTG ++GIG ++V+ L + +V+ +R+E L + +++ + V G + +
Sbjct: 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITE 61
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKET-TEFTEEDFSTVMTTNFESAYHL 129
+ ++L+ GK++ L+ NAG P + E + + NF S L
Sbjct: 62 ---DSVLKQLVNAAVKGH-GKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSL 117
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
+A P LK NGN++F+SS A + Y SSK A+N LA E + +++
Sbjct: 118 VGIALPELK-KTNGNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE--ERQVKAI 174
Query: 190 TVAPWVIRTP----LLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245
VAP ++ T + + V S E + + + ++V A L L
Sbjct: 175 AVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALHGIP 234
Query: 246 -YVTGQVICVDGG 257
V GQ + +
Sbjct: 235 DGVNGQYLSYNDP 247
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260 | Back alignment and structure |
|---|
Score = 206 bits (527), Expect = 1e-66
Identities = 60/252 (23%), Positives = 118/252 (46%), Gaps = 22/252 (8%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
+ ++TG ++GIG +V V SR+ S +
Sbjct: 25 RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKP---------SADPDIHTVAG 75
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
D+ ++++ +F G+++ L+NNAG F+ K E T+ED+ + N +H+
Sbjct: 76 DISKPETADRIVREGIERF-GRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHI 134
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIP--MCSIYASSKVAMNQLTKNLACEWAKDKIR 187
+Q A + G+G+I+ I++ + ++ + +K +N +T++LA E+++ +R
Sbjct: 135 TQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTRSLAMEFSRSGVR 194
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
VN V+P VI+TP+ + + P+ R GE +V V + L ++
Sbjct: 195 VNAVSPGVIKTPMHPAETHST--------LAGLHPVGRMGEIRDVVDAVLY--LEHAGFI 244
Query: 248 TGQVICVDGGYS 259
TG+++ VDGG +
Sbjct: 245 TGEILHVDGGQN 256
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256 | Back alignment and structure |
|---|
Score = 206 bits (526), Expect = 2e-66
Identities = 68/250 (27%), Positives = 103/250 (41%), Gaps = 8/250 (3%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR 74
ALVTG +GIG A+ L G V N+ E G D+ R
Sbjct: 4 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDR 63
Query: 75 AQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAH 134
Q +E G ++++NNAG T E V N + Q A
Sbjct: 64 DQVFAAVEQARKTL-GGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAV 122
Query: 135 PLLKSAGN-GNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAP 193
K G+ G II S AG + P ++Y+SSK A+ LT+ A + A I VN P
Sbjct: 123 EAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCP 182
Query: 194 WVIRTPLLDTVEKD------SNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
+++TP+ +++ R + R EP +V++ V++L + Y+
Sbjct: 183 GIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDYM 242
Query: 248 TGQVICVDGG 257
TGQ + +DGG
Sbjct: 243 TGQSLLIDGG 252
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246 | Back alignment and structure |
|---|
Score = 205 bits (524), Expect = 2e-66
Identities = 70/252 (27%), Positives = 118/252 (46%), Gaps = 12/252 (4%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
L G ++T +GIG A A GA V NE++L + K + V D
Sbjct: 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQE-----LEKYPGIQTRVLD 58
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
+ + Q ++ V +L++L N AG + E+D+ M N S Y +
Sbjct: 59 VTKKKQIDQFANEV-----ERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMI 113
Query: 131 QLAHPLLKSAGNGNIIFISSVAG-VIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
+ P + + +GNII +SSVA V + +Y+++K A+ LTK++A ++ + IR N
Sbjct: 114 KAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCN 173
Query: 190 TVAPWVIRTPLLDT-VEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248
V P + TP L ++ N E N + R R E++ + +L ++YVT
Sbjct: 174 CVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVT 233
Query: 249 GQVICVDGGYSV 260
G + +DGG+S+
Sbjct: 234 GNPVIIDGGWSL 245
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266 | Back alignment and structure |
|---|
Score = 205 bits (525), Expect = 3e-66
Identities = 69/252 (27%), Positives = 110/252 (43%), Gaps = 8/252 (3%)
Query: 11 LKGMTALVTGGT-KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL-QVSGSV 68
LKG LVT GIG GA V +E L + + GL +V V
Sbjct: 20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVV 79
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYH 128
CD+ + L+ + G+L++L+NNAG + T+E++ V+ S
Sbjct: 80 CDVTSTEAVDALITQTVEKA-GRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMR 138
Query: 129 LSQLAHP-LLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
++ A G I+ +SV G A S YA++K + LT+ A E + +R
Sbjct: 139 ATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVR 198
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
+N V+P + R L+ E +R+ R EP EV++ +AFL +SY+
Sbjct: 199 INAVSPSIARHKFLEKTSSS----ELLDRLASDEAFGRAAEPWEVAATIAFLASDYSSYM 254
Query: 248 TGQVICVDGGYS 259
TG+V+ V +
Sbjct: 255 TGEVVSVSSQRA 266
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254 | Back alignment and structure |
|---|
Score = 205 bits (524), Expect = 3e-66
Identities = 53/254 (20%), Positives = 97/254 (38%), Gaps = 15/254 (5%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR 74
TA+VT G L+ G V + + + + + +
Sbjct: 3 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKD------ELEAFAETYPQLKPMSE 56
Query: 75 AQREKLMETVSSQFDGKLNILINNAGTFIPKETT---EFTEEDFSTVMTTNFESAYHLSQ 131
+ +L+E V+S + G++++L++N E ++ ED+ + + L
Sbjct: 57 QEPAELIEAVTSAY-GQVDVLVSNDI--FAPEFQPIDKYAVEDYRGAVEALQIRPFALVN 113
Query: 132 LAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTV 191
+K +G+IIFI+S S Y S++ L L+ E + I V +
Sbjct: 114 AVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAI 173
Query: 192 APWVIRTPL---LDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248
P + + E EH + T + R G E+ +VAFL + Y+T
Sbjct: 174 GPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLT 233
Query: 249 GQVICVDGGYSVTG 262
GQV + GG+ +
Sbjct: 234 GQVFWLAGGFPMIE 247
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253 | Back alignment and structure |
|---|
Score = 205 bits (524), Expect = 3e-66
Identities = 65/256 (25%), Positives = 105/256 (41%), Gaps = 15/256 (5%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
+ +VTG GIG A E LA GA V N ++ + G
Sbjct: 6 RFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAV 65
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKET-----TEFTEEDFSTVMTTNFE 124
D+ + + + ++F G ++ L+NNA I E + M+ N +
Sbjct: 66 DVSDPESAKAMADRTLAEF-GGIDYLVNNAA--IFGGMKLDFLLTIDPEYYKKFMSVNLD 122
Query: 125 SAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKD 184
A ++ + + G G I+ SS A + Y +KV +N LT+ L+ E
Sbjct: 123 GALWCTRAVYKKMTKRGGGAIVNQSSTAAWLYSN---YYGLAKVGINGLTQQLSRELGGR 179
Query: 185 KIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244
IR+N +AP I T T E + +V P+ R G P+++ + FL
Sbjct: 180 NIRINAIAPGPIDTEANRTTTPK----EMVDDIVKGLPLSRMGTPDDLVGMCLFLLSDEA 235
Query: 245 SYVTGQVICVDGGYSV 260
S++TGQ+ VDGG +
Sbjct: 236 SWITGQIFNVDGGQII 251
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249 | Back alignment and structure |
|---|
Score = 205 bits (523), Expect = 4e-66
Identities = 71/247 (28%), Positives = 111/247 (44%), Gaps = 6/247 (2%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
LK A++TGG GIG A+ E A GA + + ++ G +V CD
Sbjct: 5 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNLGRRVLTVKCD 62
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
+ E + V S F G+ +IL+NNAG + E T E + N +S + ++
Sbjct: 63 VSQPGDVEAFGKQVISTF-GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMA 121
Query: 131 QLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNT 190
+ P +K G G II ++S + I + Y S+K A T+ LA + KD I VN
Sbjct: 122 KAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNA 181
Query: 191 VAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQ 250
+AP ++RT + + + R P +++ AFL S++TGQ
Sbjct: 182 IAPSLVRTATTEASALS---AMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQ 238
Query: 251 VICVDGG 257
+ VDGG
Sbjct: 239 TLAVDGG 245
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262 | Back alignment and structure |
|---|
Score = 203 bits (520), Expect = 1e-65
Identities = 59/254 (23%), Positives = 108/254 (42%), Gaps = 11/254 (4%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIV---HTCSRNETELNQRIQEWKSKGLQVSG 66
LK ++ GG K +G + A + + +++ N+ E + +G +V+
Sbjct: 8 DLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVAL 67
Query: 67 SVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESA 126
DL + KL + +F GK++I IN G + K E +E +F + T N + A
Sbjct: 68 YQSDLSNEEEVAKLFDFAEKEF-GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVA 126
Query: 127 YHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKI 186
Y + A + NG+II I++ S YA +K + T+ + E K +I
Sbjct: 127 YFFIKQAAKHMNP--NGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKELMKQQI 184
Query: 187 RVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246
VN +AP + T E E + + + +++ ++ FL + +
Sbjct: 185 SVNAIAPGPMDTSFFYGQETK----ESTAFHKSQAMGNQLTKIEDIAPIIKFLT-TDGWW 239
Query: 247 VTGQVICVDGGYSV 260
+ GQ I +GGY+
Sbjct: 240 INGQTIFANGGYTT 253
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258 | Back alignment and structure |
|---|
Score = 203 bits (518), Expect = 2e-65
Identities = 67/257 (26%), Positives = 115/257 (44%), Gaps = 15/257 (5%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSV 68
LKG L+TG ++GIG A A GA + + +++ I ++ G +
Sbjct: 4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFA 63
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAY 127
DL ++L++ ++F G +++LINNAG + K E + + VM N S
Sbjct: 64 ADLATSEACQQLVDEFVAKF-GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVV 122
Query: 128 HLSQLAHPLLKSAGN-----GNIIFISSVAGVIA-IPMCSIYASSKVAMNQLTKNLACEW 181
++ A P L +A +I S+AG P +Y ++K ++ + KN
Sbjct: 123 MTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVDFH 182
Query: 182 AKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCL 241
KD +R N V+P + T + + +R+ PM R G E++ F
Sbjct: 183 TKDGVRFNIVSPGTVDTAFHADKTQ-----DVRDRISNGIPMGRFGTAEEMAPAFLFFAS 237
Query: 242 -SATSYVTGQVICVDGG 257
A+ Y+TGQV+ ++GG
Sbjct: 238 HLASGYITGQVLDINGG 254
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252 | Back alignment and structure |
|---|
Score = 202 bits (517), Expect = 3e-65
Identities = 59/253 (23%), Positives = 101/253 (39%), Gaps = 19/253 (7%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGSVC 69
L LVTG + GIG A +GA V RNE +L Q + G Q +
Sbjct: 10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 69
Query: 70 DLKI--RAQREKLMETVSSQFDGKLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESA 126
DL ++L + ++ + +L+ +++NAG +E + + VM N +
Sbjct: 70 DLLTCTSENCQQLAQRIAVNY-PRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNAT 128
Query: 127 YHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKI 186
+ L+Q PLL + G+++F SS G YA+SK A + + LA E+ + ++
Sbjct: 129 FMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQ-RL 187
Query: 187 RVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246
RVN + P RT + + + P ++ + +L +
Sbjct: 188 RVNCINPGGTRTAMRASAFPT-------------EDPQKLKTPADIMPLYLWLMGDDSRR 234
Query: 247 VTGQVICVDGGYS 259
TG G
Sbjct: 235 KTGMTFDAQPGRK 247
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278 | Back alignment and structure |
|---|
Score = 202 bits (517), Expect = 6e-65
Identities = 68/255 (26%), Positives = 114/255 (44%), Gaps = 5/255 (1%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
L+ A++TGG GIG + +GA V + + S +S CD
Sbjct: 14 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD-VISFVHCD 72
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETT--EFTEEDFSTVMTTNFESAYH 128
+ L++T ++ GKL+I+ N G + E EDF VM N A+
Sbjct: 73 VTKDEDVRNLVDTTIAKH-GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFL 131
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSI-YASSKVAMNQLTKNLACEWAKDKIR 187
+++ A ++ A G+I+F +S++ A S Y ++K A+ LT +L E + IR
Sbjct: 132 VAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIR 191
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
VN V+P+++ +PLL V + +V+ VA+L + YV
Sbjct: 192 VNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYV 251
Query: 248 TGQVICVDGGYSVTG 262
+G + +DGGY+ T
Sbjct: 252 SGLNLVIDGGYTRTN 266
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267 | Back alignment and structure |
|---|
Score = 200 bits (510), Expect = 5e-64
Identities = 68/256 (26%), Positives = 112/256 (43%), Gaps = 8/256 (3%)
Query: 4 FREQRWSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGL 62
Q A+VTG ++GIG A+ LA+ G +V + + + ++ G
Sbjct: 18 LYFQSMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGG 77
Query: 63 QVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTN 122
+ + D+ A +L T F G +++L+NNAG E + F V+ N
Sbjct: 78 KALTAQADVSDPAAVRRLFATAEEAF-GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVN 136
Query: 123 FESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWA 182
+ ++ + A L+ G II +S+ + P IYA++K + +T L+ E
Sbjct: 137 LKGTFNTLREAAQRLRV--GGRIINMSTSQVGLLHPSYGIYAAAKAGVEAMTHVLSKELR 194
Query: 183 KDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS 242
I VN VAP T L + D E +R P+ R G P +++ VAFL
Sbjct: 195 GRDITVNAVAPGPTATDLFLEGKSD----EVRDRFAKLAPLERLGTPQDIAGAVAFLAGP 250
Query: 243 ATSYVTGQVICVDGGY 258
++V GQV+ +GG
Sbjct: 251 DGAWVNGQVLRANGGI 266
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277 | Back alignment and structure |
|---|
Score = 200 bits (510), Expect = 7e-64
Identities = 68/268 (25%), Positives = 116/268 (43%), Gaps = 20/268 (7%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGA-------------IVHTCSRNETELNQRIQEW 57
L+G A +TG +G G A +AA GA V + +L++ ++
Sbjct: 9 LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLV 68
Query: 58 KSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFST 117
++ ++ +V D + + K+++ + G+L+I++ NAG P+ + T EDF
Sbjct: 69 EAANRRIVAAVVDTRDFDRLRKVVDDGVAAL-GRLDIIVANAGVAAPQAWDDITPEDFRD 127
Query: 118 VMTTNFESAYHLSQLAHPLLKSAGN-GNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKN 176
VM N ++ P + G G+II ISS AG+ P Y +SK A+ L +
Sbjct: 128 VMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGLARA 187
Query: 177 LACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFL-----EHANRMVLRTPMLRPGEPNE 231
A E K IRVN+V P + TP+ + + ++ EP +
Sbjct: 188 FAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPDWVAEPED 247
Query: 232 VSSVVAFLCLSATSYVTGQVICVDGGYS 259
++ V +L + VT I VD G +
Sbjct: 248 IADTVCWLASDESRKVTAAQIPVDQGST 275
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255 | Back alignment and structure |
|---|
Score = 198 bits (505), Expect = 2e-63
Identities = 76/254 (29%), Positives = 123/254 (48%), Gaps = 11/254 (4%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSV 68
LKG ALVTG ++GIG A+ + LA GA + + E + + E +S G
Sbjct: 4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIG 63
Query: 69 CDLKIRAQREKLMETVSSQF-----DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNF 123
+L+ E L ++ ++ K +ILINNAG E TE+ F +++ N
Sbjct: 64 ANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNA 123
Query: 124 ESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAK 183
++ + + Q A L+ N II ISS A I++P Y+ +K A+N +T LA +
Sbjct: 124 KAPFFIIQQALSRLRD--NSRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGA 181
Query: 184 DKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243
I VN + P ++T + + D ++A + + R GE +++ AFL
Sbjct: 182 RGITVNAILPGFVKTDMNAELLSDPMMKQYATTI---SAFNRLGEVEDIADTAAFLASPD 238
Query: 244 TSYVTGQVICVDGG 257
+ +VTGQ+I V GG
Sbjct: 239 SRWVTGQLIDVSGG 252
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249 | Back alignment and structure |
|---|
Score = 197 bits (504), Expect = 3e-63
Identities = 78/250 (31%), Positives = 120/250 (48%), Gaps = 24/250 (9%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
++ LV ++GIG AV + L+ GA V C+RNE L + + VC
Sbjct: 16 GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYV---------VC 66
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETT--EFTEEDFSTVMTTNFESAY 127
DL K ++ + + +++IL+ NAG PK E T EDF + + F +
Sbjct: 67 DL------RKDLDLLFEKV-KEVDILVLNAG--GPKAGFFDELTNEDFKEAIDSLFLNMI 117
Query: 128 HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
+ + P +K G G I+ I+S + + I S+++A+ K L+ E A I
Sbjct: 118 KIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGIT 177
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
VN VAP T + + + E ++ + PM R +P E++SVVAFLC SY+
Sbjct: 178 VNCVAPGWTETERVKELLSE----EKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYL 233
Query: 248 TGQVICVDGG 257
TGQ I VDGG
Sbjct: 234 TGQTIVVDGG 243
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257 | Back alignment and structure |
|---|
Score = 197 bits (504), Expect = 3e-63
Identities = 63/273 (23%), Positives = 98/273 (35%), Gaps = 54/273 (19%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR 74
+++G GIG A + L A G + + E+ + DL
Sbjct: 3 IIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV-----------------IADLSTA 45
Query: 75 AQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAH 134
R++ + V ++ ++ L+ AG + V++ N+ A L
Sbjct: 46 EGRKQAIADVLAKCSKGMDGLVLCAGLGPQ-------TKVLGNVVSVNYFGATELMDAFL 98
Query: 135 PLLKSAGNGNIIFI----------------------------SSVAGVIAIPMCSIYASS 166
P LK + I + V YA S
Sbjct: 99 PALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGS 158
Query: 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRP 226
K A+ + A W + +R+NT+AP TPLL +D + E PM R
Sbjct: 159 KNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESI--AKFVPPMGRR 216
Query: 227 GEPNEVSSVVAFLCLSATSYVTGQVICVDGGYS 259
EP+E++SV+AFL A SYV G I +DGG
Sbjct: 217 AEPSEMASVIAFLMSPAASYVHGAQIVIDGGID 249
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279 | Back alignment and structure |
|---|
Score = 197 bits (503), Expect = 9e-63
Identities = 71/257 (27%), Positives = 117/257 (45%), Gaps = 13/257 (5%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
+ TA VTG + GIG AV LAA G V+ C+R+ ++ + ++ G V GS CD
Sbjct: 22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCD 81
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKET--TEFTEEDFSTVMTTNFESAYH 128
+ + + +F G + IL+N+AG + + ++ V+ TN +
Sbjct: 82 VTSTDEVHAAVAAAVERF-GPIGILVNSAG--RNGGGETADLDDALWADVLDTNLTGVFR 138
Query: 129 LSQLAHPLLK--SAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKI 186
+++ AG G I+ I+S G + + Y +SK + TK++ E AK I
Sbjct: 139 VTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTGI 198
Query: 187 RVNTVAPWVIRTPLLDTVEKDSNFL------EHANRMVLRTPMLRPGEPNEVSSVVAFLC 240
VN V P + TP+ + V + E R + P+ R P EV+ +V +L
Sbjct: 199 TVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLV 258
Query: 241 LSATSYVTGQVICVDGG 257
A + +T Q + V GG
Sbjct: 259 TDAAASITAQALNVCGG 275
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280 | Back alignment and structure |
|---|
Score = 197 bits (503), Expect = 1e-62
Identities = 73/267 (27%), Positives = 123/267 (46%), Gaps = 19/267 (7%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIV-------------HTCSRNETELNQRIQE 56
SL+G A +TG +G G + LAA GA + + +L++ +
Sbjct: 12 SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARL 71
Query: 57 WKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFS 116
+ +G + V D++ A +L+ QF G+L++++ NAG E T+E +
Sbjct: 72 VEDQGRKALTRVLDVRDDAALRELVADGMEQF-GRLDVVVANAGVLSWGRVWELTDEQWD 130
Query: 117 TVMTTNFESAYHLSQLAHPLLKSAGN-GNIIFISSVAGVIAIPMCSIYASSKVAMNQLTK 175
TV+ N + + P + AGN G+I+ +SS AG+ A P Y++SK + LT
Sbjct: 131 TVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALTN 190
Query: 176 NLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANR----MVLRTPMLRPGEPNE 231
LA E + IRVN++ P+ + TP+++ F H + + +E
Sbjct: 191 TLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPNGFMTADE 250
Query: 232 VSSVVAFLCLSATSYVTGQVICVDGGY 258
V+ VVA+L + +TG I VD G
Sbjct: 251 VADVVAWLAGDGSGTLTGTQIPVDKGA 277
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274 | Back alignment and structure |
|---|
Score = 197 bits (502), Expect = 1e-62
Identities = 53/264 (20%), Positives = 98/264 (37%), Gaps = 25/264 (9%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-------LNQRIQEWKSKGL 62
+L G T +TG ++GIG A+ A GA V +++ ++ + G
Sbjct: 3 TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGG 62
Query: 63 QVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTN 122
Q CD++ Q + F G ++IL+NNA + T + + F + N
Sbjct: 63 QGLALKCDIREEDQVRAAVAATVDTF-GGIDILVNNASAIWLRGTLDTPMKRFDLMQQVN 121
Query: 123 FESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA--IPMCSIYASSKVAMNQLTKNLACE 180
++ +Q P L A N +I+ ++ + + Y +K+ M+ +T LA E
Sbjct: 122 ARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGLAAE 181
Query: 181 WAKDKIRVNTVAP-WVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFL 239
+ + +N + P VI T A M+ P ++ +
Sbjct: 182 FGPQGVAINALWPRTVIATD--------------AINMLPGVDAAACRRPEIMADAAHAV 227
Query: 240 CLSATSYVTGQVICVDGGYSVTGF 263
+ GQ + D + G
Sbjct: 228 LTREAAGFHGQFLIDDEVLAQAGI 251
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 195 bits (499), Expect = 2e-62
Identities = 59/261 (22%), Positives = 109/261 (41%), Gaps = 21/261 (8%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGSV 68
+ G ALVTG +GIG A E L GA V N Q + +
Sbjct: 5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQ 64
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYH 128
CD+ + Q V F G+L+IL+NNAG + E+++ + N S
Sbjct: 65 CDVADQQQLRDTFRKVVDHF-GRLDILVNNAG--V------NNEKNWEKTLQINLVSVIS 115
Query: 129 LSQLAHPLLKSAGNGN---IIFISSVAGVIAIPMCSIYASSKVAMNQLTKN--LACEWAK 183
+ L + G II +SS+AG++ + +Y +SK + T++ LA
Sbjct: 116 GTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMN 175
Query: 184 DKIRVNTVAPWVIRTPLLDTVEKDSN---FLEHANRMVLRTPMLRPGEPNEVSSVVAFLC 240
+R+N + P + T +L+++EK+ N ++E+ + + +P +++ + L
Sbjct: 176 SGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLI 235
Query: 241 LSATSYVTGQVICVDGGYSVT 261
+ G ++ + +
Sbjct: 236 --EDDALNGAIMKITTSKGIH 254
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271 | Back alignment and structure |
|---|
Score = 195 bits (499), Expect = 3e-62
Identities = 77/252 (30%), Positives = 114/252 (45%), Gaps = 11/252 (4%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSV 68
SL G TA VTGG++GIG A+ + LA GA + T + E + G +
Sbjct: 28 SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIR 87
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYH 128
D + E+ + G L+IL+N+AG + E T DF VM NF + +
Sbjct: 88 ADNRDAEAIEQAIRETVEAL-GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFV 146
Query: 129 LSQLAHPLLKSAGNGNIIFISS-VAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
+ A L G II I S +A ++ P S+Y++SK A+ LTK LA + I
Sbjct: 147 AIRSASRHLGDGGR--IITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLGPRGIT 204
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
VN V P T + +HA R GEP +++ +VA+L +V
Sbjct: 205 VNIVHPGSTDTDMNPADG------DHAEAQRERIATGSYGEPQDIAGLVAWLAGPQGKFV 258
Query: 248 TGQVICVDGGYS 259
TG + +DGG +
Sbjct: 259 TGASLTIDGGAN 270
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263 | Back alignment and structure |
|---|
Score = 195 bits (498), Expect = 4e-62
Identities = 70/254 (27%), Positives = 118/254 (46%), Gaps = 16/254 (6%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
L G T LVTG GIG A ++ A GA + R E L + + + V D
Sbjct: 4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAA---LEAEAIAVVAD 60
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETT--EFTEEDFSTVMTTNFESAYH 128
+ E + +F G+L+ + + AG + E + V+ N ++
Sbjct: 61 VSDPKAVEAVFAEALEEF-GRLHGVAHFAG--VAHSALSWNLPLEAWEKVLRVNLTGSFL 117
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
+++ A +L+ G+++ SVAG+ A + YA+ K+ + L + LA E A+ +RV
Sbjct: 118 VARKAGEVLE--EGGSLVLTGSVAGLGAFGLAH-YAAGKLGVVGLARTLALELARKGVRV 174
Query: 189 NTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248
N + P +I+TP+ + + V +P+ R G P EV+ FL ++Y+T
Sbjct: 175 NVLLPGLIQTPMTAGLPP-----WAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYIT 229
Query: 249 GQVICVDGGYSVTG 262
GQ + VDGG S+ G
Sbjct: 230 GQALYVDGGRSIVG 243
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264 | Back alignment and structure |
|---|
Score = 195 bits (497), Expect = 5e-62
Identities = 66/253 (26%), Positives = 117/253 (46%), Gaps = 11/253 (4%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSV 68
AL+T GTKG+G V E+L A G + T + T + + +K ++
Sbjct: 4 GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQ 63
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETT--EFTEEDFSTVMTTNFESA 126
D+ + K++E S F GK++ LINNAG ++ + ++ E++++ ++ N +
Sbjct: 64 ADVTKKEDLHKIVEEAMSHF-GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAV 122
Query: 127 YHLSQLAHPLLKSAGNGNIIFIS--SVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKD 184
+HL +L P+++ G II S +A++KV + LTK +A E A+
Sbjct: 123 FHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEY 182
Query: 185 KIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244
I N V P I + + + E TP+ R G +++ ++FLC +
Sbjct: 183 GITANMVCPGDIIGEMKEATIQ-----EARQLKEHNTPIGRSGTGEDIARTISFLCEDDS 237
Query: 245 SYVTGQVICVDGG 257
+TG +I V G
Sbjct: 238 DMITGTIIEVTGA 250
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247 | Back alignment and structure |
|---|
Score = 193 bits (494), Expect = 1e-61
Identities = 71/257 (27%), Positives = 106/257 (41%), Gaps = 19/257 (7%)
Query: 1 MSDFREQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK 60
M D+ LKG LVTG +GIG A AA GA V R E L + + KS
Sbjct: 2 MFDYSAHPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSA 61
Query: 61 GLQ---VSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKE-TTEFTEEDFS 116
G + + Q +L V +F G+L+ L++NA P+ + +EDF
Sbjct: 62 GQPQPLIIALNLENATAQQYRELAARVEHEF-GRLDGLLHNASIIGPRTPLEQLPDEDFM 120
Query: 117 TVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKN 176
VM N + + L++ PLLK + + +I F SS G Y SK A L +
Sbjct: 121 QVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQT 180
Query: 177 LACEW-AKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSV 235
LA E +R N++ P RT + A P+ P P ++ V
Sbjct: 181 LADELEGVTAVRANSINPGATRTGMR------------AQAYPDENPLNNPA-PEDIMPV 227
Query: 236 VAFLCLSATSYVTGQVI 252
+L ++ + GQ +
Sbjct: 228 YLYLMGPDSTGINGQAL 244
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262 | Back alignment and structure |
|---|
Score = 193 bits (494), Expect = 1e-61
Identities = 73/250 (29%), Positives = 111/250 (44%), Gaps = 8/250 (3%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGSV 68
L+G + +VTGGTKGIG + A GA V R+ +++ + + +V G
Sbjct: 7 DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQ 66
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYH 128
D+ RAQ + L +F G ++++ NAG F T E + + N ++
Sbjct: 67 TDVSDRAQCDALAGRAVEEF-GGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFY 125
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVIA-IPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
Q L ++G+G ++ SS+ G I P S Y ++K A + A E A KI
Sbjct: 126 AVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHKIT 185
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
VN + P I T L + E+ M P G P ++ + AFL Y+
Sbjct: 186 VNAIMPGNIMTEGLLENGE-----EYIASMARSIPAGALGTPEDIGHLAAFLATKEAGYI 240
Query: 248 TGQVICVDGG 257
TGQ I VDGG
Sbjct: 241 TGQAIAVDGG 250
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277 | Back alignment and structure |
|---|
Score = 194 bits (495), Expect = 1e-61
Identities = 74/258 (28%), Positives = 123/258 (47%), Gaps = 13/258 (5%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
+ ALVTG T GIG + L G V C+R E L ++E + G++ G C
Sbjct: 19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTC 78
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEF--TEEDFSTVMTTNFESAY 127
D++ + E L+ V ++ G +++L+NNAG P +E + V+ TN +
Sbjct: 79 DVRSVPEIEALVAAVVERY-GPVDVLVNNAG--RPGGGATAELADELWLDVVETNLTGVF 135
Query: 128 HLSQLAHPLLK--SAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDK 185
+++ G G I+ I+S G + + Y++SK + TK L E A+
Sbjct: 136 RVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTG 195
Query: 186 IRVNTVAPWVIRTPLLDTVEKDSNFL------EHANRMVLRTPMLRPGEPNEVSSVVAFL 239
I VN V P + TP+ +V + + + E +R+ R P+ R +P+EV+ +VA+L
Sbjct: 196 ITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYL 255
Query: 240 CLSATSYVTGQVICVDGG 257
+ VT Q + V GG
Sbjct: 256 IGPGAAAVTAQALNVCGG 273
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255 | Back alignment and structure |
|---|
Score = 193 bits (493), Expect = 1e-61
Identities = 56/249 (22%), Positives = 95/249 (38%), Gaps = 8/249 (3%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSV--CDLK 72
+TG GIG A+ E LA G V R + ++ + + V+ + C
Sbjct: 3 VIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGGV 62
Query: 73 IRAQREKLMETVSSQFDGKLNILINNAGTFIPKETT--EFTEEDFSTVMTTNFESAYHLS 130
+ V++ L + +N G + + + +A
Sbjct: 63 LDGLVCCAGVGVTAAN-SGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPG 121
Query: 131 QLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNT 190
P++++ G+ +A + YA SK A+ L + +WA +R+N
Sbjct: 122 AAELPMVEAMLAGDEARAIELAEQQGQTHLA-YAGSKYAVTCLARRNVVDWAGRGVRLNV 180
Query: 191 VAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQ 250
VAP + TPLL + D + P+ R EP EV+ +AFL S++ G
Sbjct: 181 VAPGAVETPLLQASKADPR--YGESTRRFVAPLGRGSEPREVAEAIAFLLGPQASFIHGS 238
Query: 251 VICVDGGYS 259
V+ VDGG
Sbjct: 239 VLFVDGGMD 247
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280 | Back alignment and structure |
|---|
Score = 194 bits (495), Expect = 2e-61
Identities = 71/257 (27%), Positives = 114/257 (44%), Gaps = 11/257 (4%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSV 68
A+VTGG +GIG + LAA G I T + + I E G +V
Sbjct: 26 QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLR 85
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAG-TFIPKET-TEFTEEDFSTVMTTNFESA 126
DL + + ++ V ++F G+++ L+NNAG I ++ + E+F T++ N
Sbjct: 86 ADLADLSSHQATVDAVVAEF-GRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGT 144
Query: 127 YHLSQLAHPLL---KSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAK 183
+Q + + + +II I+SV+ V+ P Y SK + ++ LA A+
Sbjct: 145 VFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCMSKAGLAAFSQGLALRLAE 204
Query: 184 DKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243
I V V P +IR+ + V PM R GEP ++ ++VA L
Sbjct: 205 TGIAVFEVRPGIIRSDMTAAVSGK----YDGLIESGLVPMRRWGEPEDIGNIVAGLAGGQ 260
Query: 244 TSYVTGQVICVDGGYSV 260
+ TG VI DGG S+
Sbjct: 261 FGFATGSVIQADGGLSI 277
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251 | Back alignment and structure |
|---|
Score = 192 bits (489), Expect = 6e-61
Identities = 42/260 (16%), Positives = 87/260 (33%), Gaps = 30/260 (11%)
Query: 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSG 66
R S LV GG+ +G VV+ + + E
Sbjct: 16 PRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADH------------S 63
Query: 67 SVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFES 125
+ + ++E ++S+ K++ + AG + +++ + ++ N S
Sbjct: 64 FTIKDSGEEEIKSVIEKINSKS-IKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYS 122
Query: 126 AYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWA--K 183
A+ + + LL G + + A + Y ++K A + + K+LA E
Sbjct: 123 AFASAHIGAKLLN--QGGLFVLTGASAALNRTSGMIAYGATKAATHHIIKDLASENGGLP 180
Query: 184 DKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243
+ P + TP D+NF + TP+ E + + S
Sbjct: 181 AGSTSLGILPVTLDTPTNRKYMSDANFDD-------WTPLSEVAEK-----LFEWSTNSD 228
Query: 244 TSYVTGQVICVDGGYSVTGF 263
+ G ++ + VT +
Sbjct: 229 SRPTNGSLVKFETKSKVTTW 248
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281 | Back alignment and structure |
|---|
Score = 192 bits (491), Expect = 7e-61
Identities = 58/257 (22%), Positives = 103/257 (40%), Gaps = 12/257 (4%)
Query: 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQV 64
+ + S +G ALVTGG G+G + + L+A G V R L+ E + G V
Sbjct: 26 QGKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIV 85
Query: 65 SGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKET-TEFTEEDFSTVMTTNF 123
VCD+ Q L V ++F +L++L+NNAG+ +P E T E ++ ++ N
Sbjct: 86 RAVVCDVGDPDQVAALFAAVRAEF-ARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANL 144
Query: 124 ESAYHLSQLAHPLLKSAGN--GNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEW 181
A+ +Q A ++K+ G II S++ P + Y ++K A+ LTK+ A +
Sbjct: 145 TGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALDG 204
Query: 182 AKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC- 240
I + T + + ++ V ++
Sbjct: 205 RMHDIACGQIDIGNAATDMTAR------MSTGVLQANGEVAAEPTIPIEHIAEAVVYMAS 258
Query: 241 LSATSYVTGQVICVDGG 257
L ++ V +
Sbjct: 259 LPLSANVLTMTVMATRM 275
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259 | Back alignment and structure |
|---|
Score = 191 bits (488), Expect = 1e-60
Identities = 75/255 (29%), Positives = 112/255 (43%), Gaps = 11/255 (4%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
T +V G + IG A A GA +V T + + E + G
Sbjct: 6 FTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKA 65
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKET-TEFTEEDFSTVMTTNFESAYH 128
DL A+ E + + +F G+++ L++ AG I ++T E E + V+ N S +
Sbjct: 66 DLTNAAEVEAAISAAADKF-GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFL 124
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVI-AIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
++ A P + G I+ SS AG P YA+SK A+ T+ LA E KIR
Sbjct: 125 TAKTALPKMAKGGA--IVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVGP-KIR 181
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
VN V P +I T DT K E R+ T + R G +V+ +VAFL +YV
Sbjct: 182 VNAVCPGMISTTFHDTFTKP----EVRERVAGATSLKREGSSEDVAGLVAFLASDDAAYV 237
Query: 248 TGQVICVDGGYSVTG 262
TG ++GG +
Sbjct: 238 TGACYDINGGVLFSE 252
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247 | Back alignment and structure |
|---|
Score = 191 bits (487), Expect = 1e-60
Identities = 61/250 (24%), Positives = 102/250 (40%), Gaps = 13/250 (5%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
L G TALVTG +GIG A+ LAA GA V N G + D
Sbjct: 4 LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---GKKARAIAAD 60
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETT--EFTEEDFSTVMTTNFESAYH 128
+ + L + + G ++IL+NNA I + + + ++ N +
Sbjct: 61 ISDPGSVKALFAEIQALT-GGIDILVNNAS--IVPFVAWDDVDLDHWRKIIDVNLTGTFI 117
Query: 129 LSQLA-HPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
+++ + + G +I I+S P + Y ++K + T+ LA E K I
Sbjct: 118 VTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNIT 177
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
N V P +I + + + E + + M G+P ++ VV+FL ++
Sbjct: 178 ANAVTPGLIESDGVKASPHN----EAFGFVEMLQAMKGKGQPEHIADVVSFLASDDARWI 233
Query: 248 TGQVICVDGG 257
TGQ + VD G
Sbjct: 234 TGQTLNVDAG 243
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270 | Back alignment and structure |
|---|
Score = 191 bits (487), Expect = 2e-60
Identities = 70/259 (27%), Positives = 118/259 (45%), Gaps = 12/259 (4%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSV 68
L G ALVTG +GIG AV L GA +V + + + + + E K+ G
Sbjct: 15 RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIK 74
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYH 128
D++ + KL + + F G L+I ++N+G + TEE+F V + N +
Sbjct: 75 ADIRQVPEIVKLFDQAVAHF-GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFF 133
Query: 129 LSQLAHPLLKSAGNGNIIFISS-VAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
+++ A+ L G I+ SS + ++P S+Y+ SK A++ + + + KI
Sbjct: 134 VAREAYRHLTE--GGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKIT 191
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFL-------EHANRMVLRTPMLRPGEPNEVSSVVAFLC 240
VN VAP T + V + +P+ R G P +V++VV FL
Sbjct: 192 VNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFLV 251
Query: 241 LSATSYVTGQVICVDGGYS 259
+V G+V+ +DGG +
Sbjct: 252 SKEGEWVNGKVLTLDGGAA 270
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274 | Back alignment and structure |
|---|
Score = 190 bits (486), Expect = 3e-60
Identities = 67/259 (25%), Positives = 111/259 (42%), Gaps = 13/259 (5%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSV 68
L G AL TG +GIG + EL GA +V + + + E K G Q
Sbjct: 18 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQ 77
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYH 128
D+ ++ L + S F G L+ +++N+G + + E T+E F V N +
Sbjct: 78 ADISKPSEVVALFDKAVSHF-GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFF 136
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVI-AIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
++Q + G II SS+A V+ IP ++YA SK A+ + A + +
Sbjct: 137 VAQQGLKHCRR--GGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVT 194
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFL--------EHANRMVLRTPMLRPGEPNEVSSVVAFL 239
VN +AP ++T + D + + P+ R G P ++ V+ L
Sbjct: 195 VNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSAL 254
Query: 240 CLSATSYVTGQVICVDGGY 258
C + ++ GQVI + GG
Sbjct: 255 CQEESEWINGQVIKLTGGG 273
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259 | Back alignment and structure |
|---|
Score = 189 bits (482), Expect = 6e-60
Identities = 49/256 (19%), Positives = 100/256 (39%), Gaps = 16/256 (6%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAF---GAIVHTCSRNETELNQRIQEWKSK--GLQV 64
L ++TG ++G G A+ +LA G+++ +R+E+ L Q +E ++ L+V
Sbjct: 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKV 62
Query: 65 SGSVCDLKIRAQREKLMETVSSQFD---GKLNILINNAGTFIPKET---TEFTEEDFSTV 118
+ DL A ++L+ V + +LINNA T + +
Sbjct: 63 VLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNY 122
Query: 119 MTTNFESAYHLSQLAHPLLKSAGN--GNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKN 176
N S L+ + + ++ ISS+ + +Y + K A + L +
Sbjct: 123 WALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQV 182
Query: 177 LACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVV 236
LA E + +RV + AP + + + S E +++ + + +
Sbjct: 183 LAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKL 240
Query: 237 AFLCLSATSYVTGQVI 252
L L ++ +G +
Sbjct: 241 LGL-LQKDTFQSGAHV 255
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283 | Back alignment and structure |
|---|
Score = 190 bits (484), Expect = 8e-60
Identities = 74/259 (28%), Positives = 123/259 (47%), Gaps = 13/259 (5%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSV 68
SL+G ALVTG +GIG + EL G ++ + + + + K G +
Sbjct: 26 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVK 85
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYH 128
++ + ++ E F GKL+I+ +N+G + T E+F V T N +
Sbjct: 86 ANVGVVEDIVRMFEEAVKIF-GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFF 144
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVI-AIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
+++ A+ L+ G +I + S+ G A+P ++Y+ SK A+ + +A + A KI
Sbjct: 145 VAREAYKHLEI--GGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKIT 202
Query: 188 VNTVAPWVIRTPLLDTV--------EKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFL 239
VN VAP I+T + V E SN V +P+ R G P +++ VV FL
Sbjct: 203 VNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFL 262
Query: 240 CLSATSYVTGQVICVDGGY 258
+ +VTG+VI +DGG
Sbjct: 263 ASNDGGWVTGKVIGIDGGA 281
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293 | Back alignment and structure |
|---|
Score = 189 bits (483), Expect = 2e-59
Identities = 77/250 (30%), Positives = 106/250 (42%), Gaps = 8/250 (3%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGSV 68
L + LVTGGTKGIG + A GA V +R+ EL+ E V G
Sbjct: 38 DLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVR 97
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYH 128
D+ TV F G L+++ NAG F T E S V+ N + +
Sbjct: 98 LDVSDPGSCADAARTVVDAF-GALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVY 156
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVIA-IPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
Q L ++G G +I SS+ G + P S Y +SK A + A E A +
Sbjct: 157 TVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGVT 216
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
VN + P I T L + + E+ + M PM G P ++ + AFL Y+
Sbjct: 217 VNAILPGNILTEGLVDMGE-----EYISGMARSIPMGMLGSPVDIGHLAAFLATDEAGYI 271
Query: 248 TGQVICVDGG 257
TGQ I VDGG
Sbjct: 272 TGQAIVVDGG 281
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285 | Back alignment and structure |
|---|
Score = 189 bits (482), Expect = 2e-59
Identities = 70/250 (28%), Positives = 124/250 (49%), Gaps = 10/250 (4%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
+ ALVTG +GIG + + LA + V SR + + + E KS G + SG
Sbjct: 41 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAG 100
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEF--TEEDFSTVMTTNFESAY 127
D+ + + +++ + ++ ++IL+NNAG I ++ +++ V+ TN S +
Sbjct: 101 DVSKKEEISEVINKILTEH-KNVDILVNNAG--ITRDNLFLRMKNDEWEDVLRTNLNSLF 157
Query: 128 HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
+++Q + + G II ISS+ G+ + Y+SSK + TK+LA E A I
Sbjct: 158 YITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNIT 217
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
VN +AP I + + D + + + ++ P R G P EV+++ FL + Y+
Sbjct: 218 VNAIAPGFISSDMTDKISE-----QIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYI 272
Query: 248 TGQVICVDGG 257
G+V +DGG
Sbjct: 273 NGRVFVIDGG 282
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276 | Back alignment and structure |
|---|
Score = 188 bits (479), Expect = 4e-59
Identities = 53/275 (19%), Positives = 106/275 (38%), Gaps = 31/275 (11%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKS----KGLQV 64
+ + A++TGG + IG+++ L G +V +E + + E + +
Sbjct: 8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLC 67
Query: 65 SGSVCDL-KIRAQREKLMETVSSQFDGKLNILINNAGTFIP-----------KETTEFTE 112
G + + E +++ F G+ ++L+NNA + P + +
Sbjct: 68 KGDLSLSSSLLDCCEDIIDCSFRAF-GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPID 126
Query: 113 EDFSTVMTTNFESAYHLSQLAHPLLKSAG-----NGNIIFISSVAGVIAIPMCSIYASSK 167
+ + +N + L + G N +++ + + +P +Y +K
Sbjct: 127 AQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAK 186
Query: 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRP- 226
A+ LT+ A E A IRVN VAP + P E + + P+ +
Sbjct: 187 HALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQEEYRR-------KVPLGQSE 239
Query: 227 GEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261
+++ +AFL Y+TG + VDGG +
Sbjct: 240 ASAAQIADAIAFLVSKDAGYITGTTLKVDGGLILA 274
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 188 bits (480), Expect = 4e-59
Identities = 67/281 (23%), Positives = 110/281 (39%), Gaps = 31/281 (11%)
Query: 2 SDFREQRWSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQE-WKS 59
S + ++ A+VTG K IG A+ +L G +V + E K
Sbjct: 12 SGLVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKE 71
Query: 60 KGLQVSGSVCDL----KIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEED- 114
+ DL + A E+++ + F G+ ++L+NNA F P + ED
Sbjct: 72 RSNTAVVCQADLTNSNVLPASCEEIINSCFRAF-GRCDVLVNNASAFYPTPLVQGDHEDN 130
Query: 115 ---------FSTVMTTNFESAYHLSQLAHPLLKS------AGNGNIIFISSVAGVIAIPM 159
+ ++ TN + + L+ K + N +I+ +
Sbjct: 131 SNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMA 190
Query: 160 CSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVL 219
S+Y K A+ LT++ A E A IRVN VAP V P+ E+ +
Sbjct: 191 FSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKWRRK------ 244
Query: 220 RTPMLR-PGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYS 259
P+ R +++ V FL + Y+TG +I VDGG S
Sbjct: 245 -VPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS 284
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294 | Back alignment and structure |
|---|
Score = 188 bits (480), Expect = 4e-59
Identities = 79/253 (31%), Positives = 114/253 (45%), Gaps = 15/253 (5%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGA---IVHTCSRNE--TELNQRIQEWKSKGLQVS 65
LK ALVTGG GIG A A GA I + + E ++ I+E K + +
Sbjct: 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLP 106
Query: 66 GSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKET-TEFTEEDFSTVMTTNFE 124
G DL + L+ G L+IL AG + T E F N
Sbjct: 107 G---DLSDESFARSLVHKAREAL-GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVF 162
Query: 125 SAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKD 184
+ + ++Q A PLL G +II SS+ P YA++K A+ ++ LA + A+
Sbjct: 163 ALFWITQEAIPLLP-KG-ASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEK 220
Query: 185 KIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244
IRVN VAP I T L + + + + +TPM R G+P E++ V +L +
Sbjct: 221 GIRVNIVAPGPIWTALQISGGQTQDKIPQ---FGQQTPMKRAGQPAELAPVYVYLASQES 277
Query: 245 SYVTGQVICVDGG 257
SYVT +V V GG
Sbjct: 278 SYVTAEVHGVCGG 290
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317 | Back alignment and structure |
|---|
Score = 189 bits (481), Expect = 5e-59
Identities = 73/273 (26%), Positives = 124/273 (45%), Gaps = 24/273 (8%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGA------------IVHTCSRNETELNQRIQEWK 58
L+G A +TG +G G LA GA + + EL + ++ +
Sbjct: 44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVE 103
Query: 59 SKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTV 118
+G ++ D++ A + +++ ++F G ++IL++N G E T++ +S +
Sbjct: 104 EQGRRIIARQADVRDLASLQAVVDEALAEF-GHIDILVSNVGISNQGEVVSLTDQQWSDI 162
Query: 119 MTTNFESAYHLSQLAHPLLKSAGN-GNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNL 177
+ TN A+H + P + G G++IF+SS G+ P S YA+SK + L +L
Sbjct: 163 LQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLMLSL 222
Query: 178 ACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFL--------EHANRMVLRTPMLRP--G 227
A E + IRVN+V P + T + + FL E A + + +L
Sbjct: 223 ANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLPIPWV 282
Query: 228 EPNEVSSVVAFLCLSATSYVTGQVICVDGGYSV 260
EP +VS+ VA+L Y+ G I VDGG
Sbjct: 283 EPEDVSNAVAWLASDEARYIHGAAIPVDGGQLA 315
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254 | Back alignment and structure |
|---|
Score = 187 bits (476), Expect = 6e-59
Identities = 48/253 (18%), Positives = 86/253 (33%), Gaps = 20/253 (7%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSV 68
L + GIG EL R E + + + ++
Sbjct: 2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61
Query: 69 CDLKI-RAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAY 127
D+ + A+ +KL++ + Q ++ILIN AG + + NF
Sbjct: 62 YDVTVPVAESKKLLKKIFDQL-KTVDILINGAGIL--------DDHQIERTIAINFTGLV 112
Query: 128 HLSQLAHPLL---KSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKD 184
+ + K G I I SV G AI +Y++SK A+ T +LA
Sbjct: 113 NTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPIT 172
Query: 185 KIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244
+ ++ P + RTPL+ T +++L+ R+ +
Sbjct: 173 GVTAYSINPGITRTPLVHTF---NSWLDVEPRVAELLLSHPTQTSEQCGQNFVKA---IE 226
Query: 245 SYVTGQVICVDGG 257
+ G + +D G
Sbjct: 227 ANKNGAIWKLDLG 239
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247 | Back alignment and structure |
|---|
Score = 186 bits (474), Expect = 8e-59
Identities = 89/251 (35%), Positives = 143/251 (56%), Gaps = 11/251 (4%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSV 68
LKG TA+VTG ++G+G A+ +L GA IV S T L+ +E+K+ G+ V +
Sbjct: 2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAK 61
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEF--TEEDFSTVMTTNFESA 126
D+K E +++T F G+++IL+NNAG I ++T +E+D+ V+ TN +SA
Sbjct: 62 GDVKNPEDVENMVKTAMDAF-GRIDILVNNAG--ITRDTLMLKMSEKDWDDVLNTNLKSA 118
Query: 127 YHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKI 186
Y ++ ++ +G II I+S+AG+I + YA+SK + TK++A E+A I
Sbjct: 119 YLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFAAKGI 178
Query: 187 RVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246
N VAP +I+T + D + + + P+ R G P EV++VV FL ++Y
Sbjct: 179 YCNAVAPGIIKTDMTDVLPD-----KVKEMYLNNIPLKRFGTPEEVANVVGFLASDDSNY 233
Query: 247 VTGQVICVDGG 257
+TGQVI +DGG
Sbjct: 234 ITGQVINIDGG 244
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281 | Back alignment and structure |
|---|
Score = 186 bits (476), Expect = 1e-58
Identities = 70/272 (25%), Positives = 108/272 (39%), Gaps = 23/272 (8%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGA---IVHTCSRNET---------ELNQRIQEWK 58
+G TAL+TGG +G+G + LA GA I C ++ +L + + +
Sbjct: 8 FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVE 67
Query: 59 SKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTV 118
G + + D+K RA E + G ++I I NAG E + V
Sbjct: 68 KTGRRCISAKVDVKDRAALESFVAEAEDTL-GGIDIAITNAGISTIALLPEVESAQWDEV 126
Query: 119 MTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLA 178
+ TN ++ P + G I+ +SS+ G A + Y SSK + LTK A
Sbjct: 127 IGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKCAA 186
Query: 179 CEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVL----------RTPMLRPGE 228
+ I VN VAP I TP+ + L +
Sbjct: 187 HDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPFLK 246
Query: 229 PNEVSSVVAFLCLSATSYVTGQVICVDGGYSV 260
P EV+ V FL A+S++TG V+ +D G +
Sbjct: 247 PEEVTRAVLFLVDEASSHITGTVLPIDAGATA 278
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285 | Back alignment and structure |
|---|
Score = 186 bits (475), Expect = 1e-58
Identities = 57/265 (21%), Positives = 98/265 (36%), Gaps = 24/265 (9%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-------LNQRIQEWKSKGL 62
SL+G T ++GG++GIG A+ + +AA GA V +++ + +E + G
Sbjct: 6 SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGG 65
Query: 63 QVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTN 122
Q V D++ + QF G ++I +NNA E + F +
Sbjct: 66 QALPIVGDIRDGDAVAAAVAKTVEQF-GGIDICVNNASAINLGSIEEVPLKRFDLMNGIQ 124
Query: 123 FESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA-IPMCSIYASSKVAMNQLTKNLACEW 181
Y +SQ P +K N +I+ +S + + Y +K M +A E
Sbjct: 125 VRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGIAEEL 184
Query: 182 AKDKIRVNTVAP-WVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC 240
I NT+ P + T + N + M R +P + +
Sbjct: 185 RDAGIASNTLWPRTTVATAAV------------QNLLGGDEAMARSRKPEVYADAAYVVL 232
Query: 241 LSATSYVTGQVICVDGGYS--VTGF 263
+SY ++C D VT
Sbjct: 233 NKPSSYTGNTLLCEDVLLESGVTDL 257
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299 | Back alignment and structure |
|---|
Score = 187 bits (476), Expect = 2e-58
Identities = 61/275 (22%), Positives = 118/275 (42%), Gaps = 27/275 (9%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIV------------HTCSRNETELNQRIQEWK 58
++G A +TG +G G + LA GA + +L + +++ +
Sbjct: 26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVE 85
Query: 59 SKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAG-TFIPKETTEFTEEDFST 117
+ G ++ S D++ + ++ +Q G+L+I++ NA + +
Sbjct: 86 ALGRRIIASQVDVRDFDAMQAAVDDGVTQL-GRLDIVLANAALASEGTRLNRMDPKTWRD 144
Query: 118 VMTTNFESAYHLSQLAHPLLKSAGN-GNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKN 176
++ N A+ +++A P + + G+I+F SS+ G+ Y +SK ++ L +
Sbjct: 145 MIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRT 204
Query: 177 LACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNF-----------LEHANRMVLRTPMLR 225
+A E IRVN V P + TP+L F + A+R + P +
Sbjct: 205 MALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLP-IP 263
Query: 226 PGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSV 260
EP ++S+ + FL Y+TG + VDGG +
Sbjct: 264 YVEPADISNAILFLVSDDARYITGVSLPVDGGALL 298
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286 | Back alignment and structure |
|---|
Score = 186 bits (474), Expect = 2e-58
Identities = 63/279 (22%), Positives = 116/279 (41%), Gaps = 31/279 (11%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIV----------------HTCSRNETELNQRI 54
++G A VTG +G G + LA GA + + +L +
Sbjct: 9 VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETA 68
Query: 55 QEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETT-EFTEE 113
K ++ + D++ + +++ Q G+L+I++ NAG +T + +EE
Sbjct: 69 DLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQL-GRLDIIVANAGIGNGGDTLDKTSEE 127
Query: 114 DFSTVMTTNFESAYHLSQLAHPLLKSAGN-GNIIFISSVAGVIAIPMCSIYASSKVAMNQ 172
D++ ++ N + + P + + G G+II SSV G+ A P Y ++K +
Sbjct: 128 DWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVG 187
Query: 173 LTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNF-----------LEHANRMVLRT 221
L + E + IRVN+V P ++TP+L F + +M
Sbjct: 188 LMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTL 247
Query: 222 PMLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSV 260
P+ EP ++S+ V F Y+TG + +D G +
Sbjct: 248 PI-PWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL 285
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264 | Back alignment and structure |
|---|
Score = 185 bits (473), Expect = 2e-58
Identities = 73/258 (28%), Positives = 120/258 (46%), Gaps = 17/258 (6%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVS---- 65
L+ ALVTG GIG AV LA GA V C + + ++ G +
Sbjct: 4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRG 63
Query: 66 ---GSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEF--TEEDFSTVMT 120
D+ L+E V + F +++++ AG I ++ +E+D+ V+
Sbjct: 64 NHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAG--ITQDEFLLHMSEDDWDKVIA 121
Query: 121 TNFESAYHLSQLA-HPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLAC 179
N + + ++Q A L+ + G+II ISS+ G + + YA+SK + LT+ A
Sbjct: 122 VNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAAR 181
Query: 180 EWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFL 239
E + IR N+V P I TP+ V + + +++ PM G+P +V+ VVAFL
Sbjct: 182 ELGRHGIRCNSVLPGFIATPMTQKVPQ-----KVVDKITEMIPMGHLGDPEDVADVVAFL 236
Query: 240 CLSATSYVTGQVICVDGG 257
+ Y+TG + V GG
Sbjct: 237 ASEDSGYITGTSVEVTGG 254
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272 | Back alignment and structure |
|---|
Score = 185 bits (471), Expect = 5e-58
Identities = 74/253 (29%), Positives = 111/253 (43%), Gaps = 11/253 (4%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
LVTGG++GIG AV A G + + N + + G +
Sbjct: 24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPG 83
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAG-TFIPKETTEFTEEDFSTVMTTNFESAYH 128
D+ A + V QF G+L+ L+NNAG P+ E + E ++ N +
Sbjct: 84 DVGNAADIAAMFSAVDRQF-GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSIL 142
Query: 129 LSQLAHPLL---KSAGNGNIIFISSVAGVIAIP-MCSIYASSKVAMNQLTKNLACEWAKD 184
+ A + S G I+ +SS+A ++ YA+SK A++ T LA E A +
Sbjct: 143 CAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASKAAIDTFTIGLAREVAAE 202
Query: 185 KIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244
IRVN V P +I T L + + A M PM R G P EV+ + +L +
Sbjct: 203 GIRVNAVRPGIIETDLHASGGLP----DRAREMAPSVPMQRAGMPEEVADAILYLLSPSA 258
Query: 245 SYVTGQVICVDGG 257
SYVTG ++ V GG
Sbjct: 259 SYVTGSILNVSGG 271
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270 | Back alignment and structure |
|---|
Score = 184 bits (470), Expect = 6e-58
Identities = 76/250 (30%), Positives = 125/250 (50%), Gaps = 10/250 (4%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
+L A+VTG ++GIG A+ ELA GA+V + E +K GL+ G+V
Sbjct: 25 TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVL 84
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEF--TEEDFSTVMTTNFESAY 127
++ + L+E+ +F G LN+L+NNAG I ++ ++++ V+ TN ++ +
Sbjct: 85 NVNDATAVDALVESTLKEF-GALNVLVNNAG--ITQDQLAMRMKDDEWDAVIDTNLKAVF 141
Query: 128 HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
LS+ + A G I+ I+SV G P YA++K + +T+ LA E I
Sbjct: 142 RLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREIGSRGIT 201
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
VN VAP I T + + + E + + P+ R G P +++ VAFL Y+
Sbjct: 202 VNCVAPGFIDTDMTKGLPQ-----EQQTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYI 256
Query: 248 TGQVICVDGG 257
TG + V+GG
Sbjct: 257 TGTTLHVNGG 266
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247 | Back alignment and structure |
|---|
Score = 184 bits (469), Expect = 6e-58
Identities = 75/251 (29%), Positives = 125/251 (49%), Gaps = 12/251 (4%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
SL ALVTG ++GIG+ V LA+ GA V + ++ + K KG + G V
Sbjct: 2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVL 61
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEF--TEEDFSTVMTTNFESAY 127
++ + + ++ ++IL+NNAG I ++ +E+++ +V+ TN S +
Sbjct: 62 NISDIESIQNFFAEIKAEN-LAIDILVNNAG--ITRDNLMMRMSEDEWQSVINTNLSSIF 118
Query: 128 HLSQLA-HPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKI 186
+S+ ++K G II I SV G P + Y ++K + +K+LA E A I
Sbjct: 119 RMSKECVRGMMK-KRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNI 177
Query: 187 RVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246
VN VAP I T + D + E + + + P + GEP ++++ VAFL Y
Sbjct: 178 TVNVVAPGFIATDMTDKLTD-----EQKSFIATKIPSGQIGEPKDIAAAVAFLASEEAKY 232
Query: 247 VTGQVICVDGG 257
+TGQ + V+GG
Sbjct: 233 ITGQTLHVNGG 243
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256 | Back alignment and structure |
|---|
Score = 184 bits (469), Expect = 6e-58
Identities = 69/260 (26%), Positives = 127/260 (48%), Gaps = 11/260 (4%)
Query: 1 MSDFREQRWSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKS 59
M+ + A VTGG GIG ++ + L G +V C N + +++ K+
Sbjct: 1 MAHHHHHHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKA 60
Query: 60 KGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETT--EFTEEDFST 117
G S ++ ++ + V ++ G++++L+NNAG I ++ + T ED+
Sbjct: 61 LGFDFYASEGNVGDWDSTKQAFDKVKAEV-GEIDVLVNNAG--ITRDVVFRKMTREDWQA 117
Query: 118 VMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNL 177
V+ TN S +++++ + G G II ISSV G + Y+++K ++ T +L
Sbjct: 118 VIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSL 177
Query: 178 ACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVA 237
A E A + VNTV+P I T ++ + + ++V P+ R G P+E+ S+VA
Sbjct: 178 AQEVATKGVTVNTVSPGYIGTDMVKAIRP-----DVLEKIVATIPVRRLGSPDEIGSIVA 232
Query: 238 FLCLSATSYVTGQVICVDGG 257
+L + + TG ++GG
Sbjct: 233 WLASEESGFSTGADFSLNGG 252
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246 | Back alignment and structure |
|---|
Score = 183 bits (467), Expect = 9e-58
Identities = 77/250 (30%), Positives = 125/250 (50%), Gaps = 11/250 (4%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
LKG ALVTG ++GIG A+ +LA GA +V + NE + N+ + E K G
Sbjct: 2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRA 61
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEF--TEEDFSTVMTTNFESAY 127
D+ +++ F G+++IL+NNAG + K+ EE++ TV+ TN + +
Sbjct: 62 DVANAEDVTNMVKQTVDVF-GQVDILVNNAG--VTKDNLLMRMKEEEWDTVINTNLKGVF 118
Query: 128 HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
++ + +G I+ I+SV GV P + Y ++K + LTK A E A I
Sbjct: 119 LCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNIT 178
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
VN +AP I T + D +++ M+ P + GE ++++ V F + Y+
Sbjct: 179 VNAIAPGFIATDMTDVLDE-----NIKAEMLKLIPAAQFGEAQDIANAVTFFASDQSKYI 233
Query: 248 TGQVICVDGG 257
TGQ + VDGG
Sbjct: 234 TGQTLNVDGG 243
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291 | Back alignment and structure |
|---|
Score = 184 bits (470), Expect = 1e-57
Identities = 82/260 (31%), Positives = 121/260 (46%), Gaps = 21/260 (8%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET----ELNQRIQEWKSKGLQVSG 66
LKG L+TGG GIG AV A GA + +E E Q +++ K + + G
Sbjct: 45 LKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPG 104
Query: 67 SVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKET-TEFTEEDFSTVMTTNFES 125
DL + +++ Q G LNIL+NN P++ T E N S
Sbjct: 105 ---DLSDEQHCKDIVQETVRQL-GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFS 160
Query: 126 AYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDK 185
+H+++ A LK II +S+ Y+++K A+ T++L+ +
Sbjct: 161 YFHVTKAALSHLKQGDV--IINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKG 218
Query: 186 IRVNTVAPWVIRTPLLD---TVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS 242
IRVN VAP I TPL+ +K S F + PM RPG+P E++ +L S
Sbjct: 219 IRVNGVAPGPIWTPLIPSSFDEKKVSQFGSN-------VPMQRPGQPYELAPAYVYLASS 271
Query: 243 ATSYVTGQVICVDGGYSVTG 262
+SYVTGQ+I V+GG V G
Sbjct: 272 DSSYVTGQMIHVNGGVIVNG 291
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245 | Back alignment and structure |
|---|
Score = 182 bits (465), Expect = 2e-57
Identities = 68/250 (27%), Positives = 118/250 (47%), Gaps = 16/250 (6%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
LK L+TG GIG A +E A GA + C E L + + + +
Sbjct: 2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVV-----M 56
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEF--TEEDFSTVMTTNFESAY 127
D+ A E+ + G+L+ +++ AG I ++ + ED+ V+ N ++
Sbjct: 57 DVADPASVERGFAEALAHL-GRLDGVVHYAG--ITRDNFHWKMPLEDWELVLRVNLTGSF 113
Query: 128 HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
+++ A ++ G+I+ +S + + + YA+S + LT+ LA E + IR
Sbjct: 114 LVAKAASEAMREKNPGSIVLTASRVYLGNLGQAN-YAASMAGVVGLTRTLALELGRWGIR 172
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
VNT+AP I T + V + + + + TP+ R G+P EV+ FL +S++
Sbjct: 173 VNTLAPGFIETRMTAKVPE-----KVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFI 227
Query: 248 TGQVICVDGG 257
TGQV+ VDGG
Sbjct: 228 TGQVLFVDGG 237
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272 | Back alignment and structure |
|---|
Score = 183 bits (467), Expect = 2e-57
Identities = 56/247 (22%), Positives = 92/247 (37%), Gaps = 14/247 (5%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
A+VTG G+G AV LA G V R L + E L V
Sbjct: 25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCV---PT 81
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYH 128
D+ L +F G++++L NNAGT P + T + V+ TN +
Sbjct: 82 DVTDPDSVRALFTATVEKF-GRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFL 140
Query: 129 LSQLAHPLLK--SAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKI 186
+Q A ++K G II S++ P + Y ++K A+ LTK+ + + I
Sbjct: 141 CTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDGRVHDI 200
Query: 187 RVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC-LSATS 245
+ TP+ ++ + L + + V+S V ++ L +
Sbjct: 201 ACGQIDIGNADTPMAQKMK------AGVPQADLSIKVEPVMDVAHVASAVVYMASLPLDA 254
Query: 246 YVTGQVI 252
V I
Sbjct: 255 NVQFMTI 261
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235 | Back alignment and structure |
|---|
Score = 182 bits (464), Expect = 2e-57
Identities = 52/251 (20%), Positives = 88/251 (35%), Gaps = 20/251 (7%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
+ +VTG G+G A+ L G V R L Q+ G V G V D
Sbjct: 1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL---GNAVIGIVAD 57
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
L + G ++++ AGT +T E VM +N S ++
Sbjct: 58 LAHHEDVDVAFAAAVEWG-GLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVA 116
Query: 131 QLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNT 190
Q L+ G G + + S A + S+Y +SK M ++L E +R+
Sbjct: 117 QQTVRLIGERG-GVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELKDSPLRLVN 175
Query: 191 VAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAF-LCLSATSYVTG 249
+ P IR+ D + P + ++ + L ++ +VT
Sbjct: 176 LYPSGIRSEFWDNTD--------------HVDPSGFMTPEDAAAYMLDALEARSSCHVTD 221
Query: 250 QVICVDGGYSV 260
I + G+
Sbjct: 222 LFIGRNEGHHH 232
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262 | Back alignment and structure |
|---|
Score = 182 bits (465), Expect = 2e-57
Identities = 65/244 (26%), Positives = 111/244 (45%), Gaps = 15/244 (6%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
SL G A+VTG ++GIG A+ +L + GA V +R+ +L +E + G + C
Sbjct: 26 SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHAC 85
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAG-TFIPKETTEFTEEDFSTVMTTNFESAYH 128
DL V + G+ ++L+NNAG + ++ ++ N ++ Y
Sbjct: 86 DLSHSDAIAAFATGVLAAH-GRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYL 144
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
L + P + +A G+II ISS+AG + + Y +SK +N L + A E + ++RV
Sbjct: 145 LLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVRV 204
Query: 189 NTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248
+ VAP +RT + L EP++++ VVA L A
Sbjct: 205 SLVAPGSVRTEFGVGLSAK-------------KSALGAIEPDDIADVVALLATQADQSFI 251
Query: 249 GQVI 252
+V+
Sbjct: 252 SEVL 255
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269 | Back alignment and structure |
|---|
Score = 183 bits (466), Expect = 3e-57
Identities = 80/261 (30%), Positives = 130/261 (49%), Gaps = 20/261 (7%)
Query: 1 MSDFREQRWSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKS 59
M+ L ALVTG ++GIG A+ ELAA GA + + + ++ + +
Sbjct: 21 MTAL-----PLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAA 75
Query: 60 KGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETT--EFTEEDFST 117
G + D+ ++ E L V ++ G+L++L+NNAG I ++T +D+ +
Sbjct: 76 AGGEAFAVKADVSQESEVEALFAAVIERW-GRLDVLVNNAG--ITRDTLLLRMKRDDWQS 132
Query: 118 VMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNL 177
V+ N + S+ A ++ +G II I+SV G + P + Y+++K + LTK +
Sbjct: 133 VLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTV 192
Query: 178 ACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVA 237
A E A I VN VAP I T + + + ++ P+ R GE EV+ VV
Sbjct: 193 AKELASRGITVNAVAPGFIATDMTSELAAEK--------LLEVIPLGRYGEAAEVAGVVR 244
Query: 238 FLCLS-ATSYVTGQVICVDGG 257
FL A +Y+TGQVI +DGG
Sbjct: 245 FLAADPAAAYITGQVINIDGG 265
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246 | Back alignment and structure |
|---|
Score = 181 bits (463), Expect = 3e-57
Identities = 75/250 (30%), Positives = 132/250 (52%), Gaps = 11/250 (4%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
+ALVTG ++GIG ++ +LA G + + ++ + ++E K+KG+
Sbjct: 2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQA 61
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEF--TEEDFSTVMTTNFESAY 127
++ + + +++ V SQF G L++L+NNAG I ++ E+++ V+ TN + +
Sbjct: 62 NVADADEVKAMIKEVVSQF-GSLDVLVNNAG--ITRDNLLMRMKEQEWDDVIDTNLKGVF 118
Query: 128 HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
+ Q A P + +G II +SSV G + P + Y ++K + LTK+ A E A I
Sbjct: 119 NCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGIT 178
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
VN VAP I + + D + E +M+ + P+ R G+ ++++ VAFL Y+
Sbjct: 179 VNAVAPGFIVSDMTDALSD-----ELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYI 233
Query: 248 TGQVICVDGG 257
TGQ I V+GG
Sbjct: 234 TGQTIHVNGG 243
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269 | Back alignment and structure |
|---|
Score = 181 bits (463), Expect = 6e-57
Identities = 73/250 (29%), Positives = 125/250 (50%), Gaps = 10/250 (4%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
A VTGG G+G A+ L G + + S ++ + + G
Sbjct: 23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAV 82
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEF--TEEDFSTVMTTNFESAY 127
D+ E+ E V + F GK+++LINNAG I ++ T T+ D+ VM T+ ++ +
Sbjct: 83 DVADFESCERCAEKVLADF-GKVDVLINNAG--ITRDATFMKMTKGDWDAVMRTDLDAMF 139
Query: 128 HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
++++ + G I+ I SV G + YAS+K ++ TK LA E AK I
Sbjct: 140 NVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETAKRGIT 199
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
VNTV+P + T +++ V +D +++ + P+ R G P+EV++++AFLC +V
Sbjct: 200 VNTVSPGYLATAMVEAVPQDV----LEAKILPQIPVGRLGRPDEVAALIAFLCSDDAGFV 255
Query: 248 TGQVICVDGG 257
TG + ++GG
Sbjct: 256 TGADLAINGG 265
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291 | Back alignment and structure |
|---|
Score = 182 bits (463), Expect = 1e-56
Identities = 66/293 (22%), Positives = 110/293 (37%), Gaps = 48/293 (16%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKG------- 61
+ ALVTG K +G ++ E L A G + R+ E N ++
Sbjct: 6 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITV 65
Query: 62 -----------LQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEF 110
+ + + + + +L+ + + G+ ++L+NNA +F P
Sbjct: 66 QADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRN 124
Query: 111 TEEDF--------------STVMTTNFESAYHLSQLAHPLLKS------AGNGNIIFISS 150
E+ + + +N + Y L + + N +II +
Sbjct: 125 DEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVD 184
Query: 151 VAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNF 210
+ +IY +K A+ LT++ A E A +IRVN V P + D
Sbjct: 185 AMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV-------DDMP 237
Query: 211 LEHANRMVLRTPML-RPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVTG 262
+ P+ R EVS VV FLC S Y+TG + VDGGYS+T
Sbjct: 238 PAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR 290
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278 | Back alignment and structure |
|---|
Score = 180 bits (458), Expect = 5e-56
Identities = 66/270 (24%), Positives = 112/270 (41%), Gaps = 27/270 (10%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIV------------HTCSRNETELNQRIQEWK 58
L G A +TG +G G A LAA GA + EL ++ +
Sbjct: 11 LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE 70
Query: 59 SKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTV 118
G ++ D++ R ++ + G+L+I++ NAG I ++ + V
Sbjct: 71 DIGSRIVARQADVRDRESLSAALQAGLDEL-GRLDIVVANAG--I--APMSAGDDGWHDV 125
Query: 119 MTTNFESAYHLSQLAHPLLKSAGN-GNIIFISSVAGVIAI----PMCSIYASSKVAMNQL 173
+ N YH ++A P L G G+I+ ISS AG+ + P Y ++K + L
Sbjct: 126 IDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGL 185
Query: 174 TKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPM-----LRPGE 228
+ A A IRVN++ P + TP+++ + A M +
Sbjct: 186 MRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMPVEVLA 245
Query: 229 PNEVSSVVAFLCLSATSYVTGQVICVDGGY 258
P +V++ VA+L Y+TG + VD G+
Sbjct: 246 PEDVANAVAWLVSDQARYITGVTLPVDAGF 275
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328 | Back alignment and structure |
|---|
Score = 181 bits (461), Expect = 6e-56
Identities = 66/293 (22%), Positives = 111/293 (37%), Gaps = 48/293 (16%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKG------- 61
+ ALVTG K +G ++ E L A G + R+ E N ++
Sbjct: 43 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITV 102
Query: 62 -----------LQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEF 110
+ + + + + +L+ + + G+ ++L+NNA +F P
Sbjct: 103 QADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRN 161
Query: 111 TEEDF--------------STVMTTNFESAYHLSQLAHPLLKS------AGNGNIIFISS 150
E+ + + +N + Y L + + N +II +
Sbjct: 162 DEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVD 221
Query: 151 VAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNF 210
+ +IY +K A+ LT++ A E A +IRVN V P + +
Sbjct: 222 AMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL----VDDMPPAV 277
Query: 211 LEHANRMVLRTPML-RPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVTG 262
E + P+ R EVS VV FLC S Y+TG + VDGGYS+T
Sbjct: 278 WE---GHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR 327
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260 | Back alignment and structure |
|---|
Score = 178 bits (455), Expect = 9e-56
Identities = 55/253 (21%), Positives = 95/253 (37%), Gaps = 9/253 (3%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
+ G +VTG ++GIG + +L GA V+ R+ L QE +S G Q VC
Sbjct: 2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVC 61
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEF-------TEEDFSTVMTTN 122
D ++ L E V + G+L++L+NNA + + +
Sbjct: 62 DSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVG 121
Query: 123 FESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWA 182
Y S L+ AG G I+ ISS + + Y K A ++L + A E
Sbjct: 122 LRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMFN-VPYGVGKAACDKLAADCAHELR 180
Query: 183 KDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCL- 241
+ + ++ P +++T LL L+ ++ V L
Sbjct: 181 RHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALATD 240
Query: 242 SATSYVTGQVICV 254
++G+V+
Sbjct: 241 PNILSLSGKVLPS 253
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244 | Back alignment and structure |
|---|
Score = 178 bits (454), Expect = 1e-55
Identities = 68/247 (27%), Positives = 120/247 (48%), Gaps = 12/247 (4%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKI 73
+VTG ++GIG A+ L G ++ +R+ + ++ ++ G Q D+
Sbjct: 3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK 62
Query: 74 RAQREKLMETVSSQFDGKLNILINNAGTFIPKETT--EFTEEDFSTVMTTNFESAYHLSQ 131
A E +M+T + G +++++NNAG I ++T + + V+ N + +Q
Sbjct: 63 EADVEAMMKTAIDAW-GTIDVVVNNAG--ITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQ 119
Query: 132 LAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTV 191
A ++ G II I+SV G+I + YA++K + +K A E A I VN V
Sbjct: 120 AATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVV 179
Query: 192 APWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS-ATSYVTGQ 250
P I + + + + + +++ P+ R G+P V+ +V FL LS A SY+TGQ
Sbjct: 180 CPGFIASDMTAKLGE-----DMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQ 234
Query: 251 VICVDGG 257
+DGG
Sbjct: 235 AFTIDGG 241
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248 | Back alignment and structure |
|---|
Score = 177 bits (452), Expect = 2e-55
Identities = 77/252 (30%), Positives = 125/252 (49%), Gaps = 13/252 (5%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSV 68
L+G +LVTG T+GIG A+ E+LA+ G+ ++ T + E + G++ G
Sbjct: 4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVE 63
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEF--TEEDFSTVMTTNFESA 126
+L K E + + ++IL+NNAG I ++ + D+ V+ N
Sbjct: 64 MNLLSEESINKAFEEIYNLV-DGIDILVNNAG--ITRDKLFLRMSLLDWEEVLKVNLTGT 120
Query: 127 YHLSQLA-HPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDK 185
+ ++Q + ++K G I+ ISSV G Y+++K + TK+LA E A
Sbjct: 121 FLVTQNSLRKMIK-QRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRN 179
Query: 186 IRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245
+ VN VAP I T + + + E + + P+ R G P EV++VV FLC S
Sbjct: 180 VLVNAVAPGFIETDMTAVLSE-----EIKQKYKEQIPLGRFGSPEEVANVVLFLCSELAS 234
Query: 246 YVTGQVICVDGG 257
Y+TG+VI V+GG
Sbjct: 235 YITGEVIHVNGG 246
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248 | Back alignment and structure |
|---|
Score = 177 bits (452), Expect = 2e-55
Identities = 79/251 (31%), Positives = 128/251 (50%), Gaps = 15/251 (5%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
+L+G ALVTG ++GIG A+ E LA GA V + +E+ G G
Sbjct: 6 NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYL---GDNGKGMAL 62
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEF--TEEDFSTVMTTNFESAY 127
++ E +++ ++ +F G ++IL+NNAG I ++ EE++S +M TN S +
Sbjct: 63 NVTNPESIEAVLKAITDEF-GGVDILVNNAG--ITRDNLLMRMKEEEWSDIMETNLTSIF 119
Query: 128 HLSQLA-HPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKI 186
LS+ ++K G II + SV G + + YA++K + TK++A E A +
Sbjct: 120 RLSKAVLRGMMK-KRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGV 178
Query: 187 RVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246
VNTVAP I T + + E + + P R G+P E++S VAFL +Y
Sbjct: 179 TVNTVAPGFIETDMTKALND-----EQRTATLAQVPAGRLGDPREIASAVAFLASPEAAY 233
Query: 247 VTGQVICVDGG 257
+TG+ + V+GG
Sbjct: 234 ITGETLHVNGG 244
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287 | Back alignment and structure |
|---|
Score = 178 bits (453), Expect = 4e-55
Identities = 67/283 (23%), Positives = 115/283 (40%), Gaps = 38/283 (13%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIV------------HTCSRNETELNQRIQEWK 58
++ LVTGG +G G + +LA GA + +L + E +
Sbjct: 8 VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVE 67
Query: 59 SKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTV 118
G + + D++ RA + + ++F GKL++++ NAG I + F+
Sbjct: 68 KTGRKAYTAEVDVRDRAAVSRELANAVAEF-GKLDVVVANAG--ICPLGAHLPVQAFADA 124
Query: 119 MTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI-----------PMCSIYASSK 167
+F + A P L +G +II SVAG+IA P + Y+ +K
Sbjct: 125 FDVDFVGVINTVHAALPYLT-SG-ASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAK 182
Query: 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFL------EHANRMVLRT 221
++ T LA + A IR N + P + T +L++ F A+ ++
Sbjct: 183 QLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFP 242
Query: 222 PMLRPG----EPNEVSSVVAFLCLSATSYVTGQVICVDGGYSV 260
M E +++S+ V FL + YVTG VD G +
Sbjct: 243 AMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAML 285
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266 | Back alignment and structure |
|---|
Score = 177 bits (451), Expect = 5e-55
Identities = 72/251 (28%), Positives = 119/251 (47%), Gaps = 15/251 (5%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
L G ALVTG T GIG A+ A GAIV E +L + + G V
Sbjct: 24 KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAAD---LGKDVFVFSA 80
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEF--TEEDFSTVMTTNFESAY 127
+L R ++L E + ++IL+NNAG I ++ ++D+ V+ N +A
Sbjct: 81 NLSDRKSIKQLAEVAEREM-EGIDILVNNAG--ITRDGLFVRMQDQDWDDVLAVNLTAAS 137
Query: 128 HLSQLA-HPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKI 186
L++ H +++ G II I+S+ GV+ P + Y ++K + +K LA E A I
Sbjct: 138 TLTRELIHSMMR-RRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRNI 196
Query: 187 RVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246
VN +AP I++ + D + + ++ PM R G E++ +L +Y
Sbjct: 197 TVNCIAPGFIKSAMTDKLNEK-----QKEAIMAMIPMKRMGIGEEIAFATVYLASDEAAY 251
Query: 247 VTGQVICVDGG 257
+TGQ + ++GG
Sbjct: 252 LTGQTLHINGG 262
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249 | Back alignment and structure |
|---|
Score = 171 bits (436), Expect = 4e-53
Identities = 76/251 (30%), Positives = 122/251 (48%), Gaps = 19/251 (7%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
L G T+L+TG + GIG A+ L G+ V NE +L K VC
Sbjct: 11 DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYT---IEVC 67
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEF--TEEDFSTVMTTNFESAY 127
+L + + L+ L+IL+ NAG I +T ++DF V+ N ++ +
Sbjct: 68 NLANKEECSNLISKT-----SNLDILVCNAG--ITSDTLAIRMKDQDFDKVIDINLKANF 120
Query: 128 HLSQLA-HPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKI 186
L++ A +++ G II ISS+ G+ P + Y +SK + +TK+L+ E A I
Sbjct: 121 ILNREAIKKMIQ-KRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGI 179
Query: 187 RVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246
VN VAP I++ + D + + +V + P+ G P +V+ VAFL + SY
Sbjct: 180 TVNAVAPGFIKSDMTDKLNEK-----QREAIVQKIPLGTYGIPEDVAYAVAFLASNNASY 234
Query: 247 VTGQVICVDGG 257
+TGQ + V+GG
Sbjct: 235 ITGQTLHVNGG 245
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241 | Back alignment and structure |
|---|
Score = 171 bits (435), Expect = 5e-53
Identities = 41/257 (15%), Positives = 80/257 (31%), Gaps = 27/257 (10%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
S + LV GG +G V+ A V + E E S + V +
Sbjct: 4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE-------ASASVIVKMTDS 56
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKET-TEFTEEDFSTVMTTNFESAYH 128
+ Q + + D K++ ++ AG + ++ ++ + + ++
Sbjct: 57 FTEQADQVTAEVGKLLG--DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTI 114
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWA--KDKI 186
S LA LK G + + A + P Y +K A++QL ++LA + +
Sbjct: 115 SSHLATKHLK--EGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGA 172
Query: 187 RVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246
V P + TP+ ++ +
Sbjct: 173 AAIAVLPVTLDTPMNRKSMPEA-------------DFSSWTPLEFLVETFHDWITGNKRP 219
Query: 247 VTGQVICVDGGYSVTGF 263
+G +I V T
Sbjct: 220 NSGSLIQVVTTDGKTEL 236
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236 | Back alignment and structure |
|---|
Score = 170 bits (434), Expect = 7e-53
Identities = 39/257 (15%), Positives = 92/257 (35%), Gaps = 28/257 (10%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
+ +V GG +G A++E G V + + + V G+
Sbjct: 1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADS-------NILVDGNKNW 53
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKET-TEFTEEDFSTVMTTNFESAYHL 129
+ ++ L +T SS +++ + AG + ++ ++ ++ + S+
Sbjct: 54 TE--QEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIA 111
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWA--KDKIR 187
++LA LK G + + A + P Y +K A++ LT +LA + + D
Sbjct: 112 AKLATTHLK--PGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSA 169
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS-ATSY 246
V T+ P + TP+ +++ + +S + ++
Sbjct: 170 VLTIMPVTLDTPMNRKWMPNADH-------------SSWTPLSFISEHLLKWTTETSSRP 216
Query: 247 VTGQVICVDGGYSVTGF 263
+G ++ + +
Sbjct: 217 SSGALLKITTENGTSTI 233
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247 | Back alignment and structure |
|---|
Score = 170 bits (433), Expect = 1e-52
Identities = 72/251 (28%), Positives = 113/251 (45%), Gaps = 23/251 (9%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
+ LVTGG +GIG A+ + LAA G V R + G
Sbjct: 12 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGS-----------GAPKGLFGVEV 60
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEF--TEEDFSTVMTTNFESAY 127
D+ ++ V G + +L++NAG + + TEE F V+ N A+
Sbjct: 61 DVTDSDAVDRAFTAVEEHQ-GPVEVLVSNAG--LSADAFLMRMTEEKFEKVINANLTGAF 117
Query: 128 HLSQLA-HPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKI 186
++Q A + + G +IFI SV+G+ I + YA+SK + + +++A E +K +
Sbjct: 118 RVAQRASRSMQR-NKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANV 176
Query: 187 RVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246
N VAP I T + +++ + P R G P EV+ VV+FL SY
Sbjct: 177 TANVVAPGYIDTDMTRALDE-----RIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASY 231
Query: 247 VTGQVICVDGG 257
++G VI VDGG
Sbjct: 232 ISGAVIPVDGG 242
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245 | Back alignment and structure |
|---|
Score = 170 bits (433), Expect = 1e-52
Identities = 75/247 (30%), Positives = 122/247 (49%), Gaps = 12/247 (4%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQ-VSGSVCDLK 72
AL+TG ++GIG A+ LA G + +N + + +E + +G V+ +L
Sbjct: 3 KALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLL 62
Query: 73 IRAQREKLMETVSSQFDGKLNILINNAGTFIPKETT--EFTEEDFSTVMTTNFESAYHLS 130
L+ + G L+ L+NNAG I ++T +ED+ V+ N + + +
Sbjct: 63 EAEAATALVHQAAEVL-GGLDTLVNNAG--ITRDTLLVRMKDEDWEAVLEANLSAVFRTT 119
Query: 131 QLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNT 190
+ A L+ A G I+ I+SV G++ P + Y +SK + T+ +A E+A+ I VN
Sbjct: 120 REAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITVNA 179
Query: 191 VAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQ 250
VAP I T + + + + E + + P R G P EV+ VAFL Y+TGQ
Sbjct: 180 VAPGFIETEMTERLPQ-----EVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEKAGYITGQ 234
Query: 251 VICVDGG 257
+CVDGG
Sbjct: 235 TLCVDGG 241
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253 | Back alignment and structure |
|---|
Score = 168 bits (429), Expect = 6e-52
Identities = 72/251 (28%), Positives = 113/251 (45%), Gaps = 23/251 (9%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
S + LVTGG +GIG A+ A G V R+ C
Sbjct: 18 SHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSG-----------EPPEGFLAVKC 66
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEF--TEEDFSTVMTTNFESAY 127
D+ Q E+ + + G + +LI NAG + K+ +EEDF++V+ TN +
Sbjct: 67 DITDTEQVEQAYKEIEETH-GPVEVLIANAG--VTKDQLLMRMSEEDFTSVVETNLTGTF 123
Query: 128 HLSQLA-HPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKI 186
+ + A +L+ A G ++ ISSV G++ + YA+SK + ++LA E I
Sbjct: 124 RVVKRANRAMLR-AKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRNI 182
Query: 187 RVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246
N VAP + T + + + +V + P+ R P E+++ V FL SY
Sbjct: 183 TFNVVAPGFVDTDMTKVLTDE-----QRANIVSQVPLGRYARPEEIAATVRFLASDDASY 237
Query: 247 VTGQVICVDGG 257
+TG VI VDGG
Sbjct: 238 ITGAVIPVDGG 248
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252 | Back alignment and structure |
|---|
Score = 167 bits (426), Expect = 1e-51
Identities = 41/231 (17%), Positives = 80/231 (34%), Gaps = 9/231 (3%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
+ + T V G IG + ++ AA G V RN +L + E ++ G ++
Sbjct: 4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSL 63
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
D + + + + L + I N G + E T+ F V + +
Sbjct: 64 DARNEDEVTAFLNAADA--HAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVS 121
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV- 188
+ + L+ + G G I F + A + + +AS+K + + +++A E I V
Sbjct: 122 GRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMPKNIHVA 181
Query: 189 NTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFL 239
+ + + T + E P V+ L
Sbjct: 182 HLIIDSGVDTAWVRER------REQMFGKDALANPDLLMPPAAVAGAYWQL 226
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346 | Back alignment and structure |
|---|
Score = 169 bits (430), Expect = 4e-51
Identities = 52/257 (20%), Positives = 95/257 (36%), Gaps = 26/257 (10%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-------LNQRIQEWKSKGL 62
L G T +TG ++GIG A+ + A GA + ++ + +E ++ G
Sbjct: 42 RLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGG 101
Query: 63 QVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTN 122
+ + D++ Q +E +F G ++IL+NNA T + + +M N
Sbjct: 102 KALPCIVDVRDEQQISAAVEKAIKKF-GGIDILVNNASAISLTNTLDTPTKRLDLMMNVN 160
Query: 123 FESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA--IPMCSIYASSKVAMNQLTKNLACE 180
Y S+ P LK + +I+ IS + Y +K M+ +A E
Sbjct: 161 TRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEE 220
Query: 181 WAKDKIRVNTVAP-WVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFL 239
+ K +I VN + P I T +D + R ++ + A+
Sbjct: 221 F-KGEIAVNALWPKTAIHTAAMDMLGGP------GIESQCRKV--------DIIADAAYS 265
Query: 240 CLSATSYVTGQVICVDG 256
TG + +
Sbjct: 266 IFQKPKSFTGNFVIDEN 282
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454 | Back alignment and structure |
|---|
Score = 168 bits (428), Expect = 8e-50
Identities = 67/252 (26%), Positives = 110/252 (43%), Gaps = 18/252 (7%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKGLQVSGSV 68
L G A+VTG +GIG + E A GA + +L + + L
Sbjct: 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALT----- 265
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEF--TEEDFSTVMTTNFESA 126
D+ +K+ V+ GK++IL+NNAG I ++ E+ + V+ N +
Sbjct: 266 LDVTADDAVDKITAHVTEHHGGKVDILVNNAG--ITRDKLLANMDEKRWDAVIAVNLLAP 323
Query: 127 YHLSQ-LAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDK 185
L++ L G +I +SS+AG+ + YA++K M L + LA A
Sbjct: 324 QRLTEGLVGNGTI-GEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPVLADKG 382
Query: 186 IRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245
I +N VAP I T + T E R+ + + G+P +V+ ++A+ A++
Sbjct: 383 ITINAVAPGFIETKM--TEAIPLATREVGRRLN---SLFQGGQPVDVAELIAYFASPASN 437
Query: 246 YVTGQVICVDGG 257
VTG I V G
Sbjct: 438 AVTGNTIRVCGQ 449
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250 | Back alignment and structure |
|---|
Score = 161 bits (409), Expect = 6e-49
Identities = 49/252 (19%), Positives = 96/252 (38%), Gaps = 19/252 (7%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN---QRIQEWKSKGLQVSG 66
+ A++TG ++GIG + LA G V +R++ L I +
Sbjct: 4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIV 63
Query: 67 SVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESA 126
D+ + + ++ + ++ G ++IL+N A + ++F +M N +
Sbjct: 64 LPLDITDCTKADTEIKDIHQKY-GAVDILVNAAA-MFMDGSLSEPVDNFRKIMEINVIAQ 121
Query: 127 YHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKI 186
Y + + ++K NG I ++S A IY S+K A+ L ++L E A I
Sbjct: 122 YGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPLGI 181
Query: 187 RVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC-LSATS 245
RV T+ P + T + +P+++ + + L LS
Sbjct: 182 RVTTLCPGWVNTDMAKKAGTP-------------FKDEEMIQPDDLLNTIRCLLNLSENV 228
Query: 246 YVTGQVICVDGG 257
+ V +
Sbjct: 229 CIKDIVFEMKKS 240
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244 | Back alignment and structure |
|---|
Score = 160 bits (407), Expect = 9e-49
Identities = 61/245 (24%), Positives = 103/245 (42%), Gaps = 22/245 (8%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGA-------IVHTCSRNETELNQRIQEWKSKGLQVSGS 67
L+TG KGIG A+ E A ++ SR +L + E +++G
Sbjct: 4 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTI 63
Query: 68 VCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAY 127
D+ A +L + ++ G ++ L+NNAG ++ TEEDF M TN + +
Sbjct: 64 TADISDMADVRRLTTHIVERY-GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTF 122
Query: 128 HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
L+Q L++ +G+I FI+SVA A SIY SK L + + K +R
Sbjct: 123 FLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVR 182
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
+ V P + TP+ V+ + P ++++ V L + V
Sbjct: 183 ITDVQPGAVYTPMWGKVDDEM--------------QALMMMPEDIAAPVVQAYLQPSRTV 228
Query: 248 TGQVI 252
++I
Sbjct: 229 VEEII 233
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202 | Back alignment and structure |
|---|
Score = 157 bits (398), Expect = 5e-48
Identities = 47/242 (19%), Positives = 80/242 (33%), Gaps = 43/242 (17%)
Query: 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLK 72
M L+ G + +G AV E L A V T R+ ++ D+
Sbjct: 3 AMKILLIGASGTLGSAVKERLEK-KAEVITAGRHSGDV-----------------TVDIT 44
Query: 73 IRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQL 132
+K+ E V GK++ +++ G+ TE T E + +++ +L L
Sbjct: 45 NIDSIKKMYEQV-----GKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLL 99
Query: 133 AHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVA 192
L G+ + + I + A + A+ K+ A E + IR+NTV+
Sbjct: 100 GIDSLND--KGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMPR-GIRINTVS 156
Query: 193 PWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVI 252
P V+ P P + V S TG+
Sbjct: 157 PNVLEES-----------------WDKLEPFFEGFLPVPAAKVARAFEKSVFGAQTGESY 199
Query: 253 CV 254
V
Sbjct: 200 QV 201
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281 | Back alignment and structure |
|---|
Score = 158 bits (401), Expect = 2e-47
Identities = 54/259 (20%), Positives = 105/259 (40%), Gaps = 23/259 (8%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
+G +A+V+GG G+G A V L A G V + E G + +
Sbjct: 28 FEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADE---LGNRAEFVSTN 84
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIP-----KETTEFTEEDFSTVMTTNFES 125
+ +E + ++ + G + ++ + F+ +
Sbjct: 85 VTSEDSVLAAIEAANQLG-RLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNG 143
Query: 126 AYHLSQLAHPL------LKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLAC 179
Y++++L ++ G ++ +S+AG + YA++K + LT A
Sbjct: 144 TYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAAAR 203
Query: 180 EWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPML-RPGEPNEVSSVVAF 238
+ + IRVNT+AP ++TP++++V + E + P R G P+E + AF
Sbjct: 204 DLSSAGIRVNTIAPGTMKTPIMESVGE-----EALAKFAANIPFPKRLGTPDEFADAAAF 258
Query: 239 LCLSATSYVTGQVICVDGG 257
L Y+ G+V+ +DG
Sbjct: 259 LL--TNGYINGEVMRLDGA 275
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286 | Back alignment and structure |
|---|
Score = 155 bits (393), Expect = 3e-46
Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 5/196 (2%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQ-VSGSV 68
L+G +VTG +KGIG + LA GA V +R++ L + + G
Sbjct: 25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIA 84
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYH 128
++ E+ + G L++LI N T M NF S
Sbjct: 85 GTMEDMTFAEQFVAQAGKLM-GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVV 143
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDK--I 186
L+ A P+LK NG+I+ +SS+AG +A PM + Y++SK A++ ++ E++ + +
Sbjct: 144 LTVAALPMLK-QSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNV 202
Query: 187 RVNTVAPWVIRTPLLD 202
+ +I T
Sbjct: 203 SITLCVLGLIDTETAM 218
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272 | Back alignment and structure |
|---|
Score = 153 bits (388), Expect = 1e-45
Identities = 51/236 (21%), Positives = 90/236 (38%), Gaps = 19/236 (8%)
Query: 4 FREQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQ 63
++R S+ G L+TG GIG E A + + N+ L + + K G +
Sbjct: 22 MPKRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAK 81
Query: 64 VSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNF 123
V V D R + V ++ G ++IL+NNAG + + N
Sbjct: 82 VHTFVVDCSNREDIYSSAKKVKAEI-GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNV 140
Query: 124 ESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWA- 182
+ + ++ P + +G+I+ ++S AG +++P Y SSK A K L E A
Sbjct: 141 LAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAA 200
Query: 183 --KDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVV 236
++ + P + T + T + EP EV + +
Sbjct: 201 LQITGVKTTCLCPNFVNTGFIKNP---------------STSLGPTLEPEEVVNRL 241
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265 | Back alignment and structure |
|---|
Score = 151 bits (383), Expect = 5e-45
Identities = 64/261 (24%), Positives = 117/261 (44%), Gaps = 24/261 (9%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
S+KG+ A++TGG G+G A E L GA + + ++ G +
Sbjct: 9 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKK---LGNNCVFAPA 65
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAG------TFIPKETTEFTEEDFSTVMTTNF 123
D+ + + +F G++++ +N AG T+ K+ T EDF V+ N
Sbjct: 66 DVTSEKDVQTALALAKGKF-GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNL 124
Query: 124 ESAYHLSQLA------HPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNL 177
+++ +L + + G II +SVA + Y++SK + +T +
Sbjct: 125 MGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPI 184
Query: 178 ACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPML-RPGEPNEVSSVV 236
A + A IRV T+AP + TPLL ++ + + N + + P R G+P E + +V
Sbjct: 185 ARDLAPIGIRVMTIAPGLFGTPLLTSLPE-----KVCNFLASQVPFPSRLGDPAEYAHLV 239
Query: 237 AFLCLSATSYVTGQVICVDGG 257
+ + ++ G+VI +DG
Sbjct: 240 QAIIEN--PFLNGEVIRLDGA 258
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301 | Back alignment and structure |
|---|
Score = 150 bits (382), Expect = 2e-44
Identities = 52/233 (22%), Positives = 94/233 (40%), Gaps = 7/233 (3%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
G A+VTGG GIG A E A GA + ++ L Q + + +G G VC
Sbjct: 28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVC 87
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
D++ + +L + G ++++ +NAG + + +D+ V+ + + H
Sbjct: 88 DVRHLDEMVRLADEAFRLL-GGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHA 146
Query: 130 SQLAHPLLKSAGN-GNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
+ P L G G+I F +S AG++ Y +K + L + LA E + I V
Sbjct: 147 VEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIGV 206
Query: 189 NTVAPWVIRTPLLDTVEKD-----SNFLEHANRMVLRTPMLRPGEPNEVSSVV 236
+ + P V+ T L+ E+ ++V+ +
Sbjct: 207 SVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLT 259
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245 | Back alignment and structure |
|---|
Score = 146 bits (371), Expect = 2e-43
Identities = 57/244 (23%), Positives = 101/244 (41%), Gaps = 19/244 (7%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
SLK A+VTG T G+G +V++L+ + RN L + V
Sbjct: 2 SLKKKIAVVTGATGGMGIEIVKDLSRDHIVY-ALGRNPEHLAALAEI-----EGVEPIES 55
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
D+ E ++ + + ++ L++ A + ++ + N L
Sbjct: 56 DIVKEVLEEGGVDKLKNL--DHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAEL 113
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
S+ P L+ A +G +I+I+S AG P +IYA+SK A+ L E A + IRV+
Sbjct: 114 SRQLLPALR-AASGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRVS 172
Query: 190 TVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFL-CLSATSYVT 248
TV+P TP+L + + EP E+++ + F+ T+ +T
Sbjct: 173 TVSPGPTNTPMLQGLM------DSQGTNFRPE---IYIEPKEIANAIRFVIDAGETTQIT 223
Query: 249 GQVI 252
+
Sbjct: 224 NVDV 227
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322 | Back alignment and structure |
|---|
Score = 146 bits (370), Expect = 2e-42
Identities = 65/264 (24%), Positives = 106/264 (40%), Gaps = 26/264 (9%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIV----------HTCSRNETELNQRIQEWKS 59
+ G +VTG GIG A AA GA V + + + + E +
Sbjct: 24 VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITA 83
Query: 60 KGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVM 119
G + ++ Q L++T F G L++L+NNAG + +EE+F V+
Sbjct: 84 AGGEAVADGSNVADWDQAAGLIQTAVETF-GGLDVLVNNAGIVRDRMIANTSEEEFDAVI 142
Query: 120 TTNFESAYHLSQLAHPLLKSAGN------GNIIFISSVAGVIAIPMCSIYASSKVAMNQL 173
+ + + + A + G II SS AG+ Y+++K + L
Sbjct: 143 AVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATL 202
Query: 174 TKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVS 233
T A E + + VN +AP RT + +TV + M + P VS
Sbjct: 203 TLVGAAEMGRYGVTVNAIAP-SARTRMTETVFAEM--------MATQDQDFDAMAPENVS 253
Query: 234 SVVAFLCLSATSYVTGQVICVDGG 257
+V +L + VTG+V V+GG
Sbjct: 254 PLVVWLGSAEARDVTGKVFEVEGG 277
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257 | Back alignment and structure |
|---|
Score = 143 bits (364), Expect = 3e-42
Identities = 62/258 (24%), Positives = 106/258 (41%), Gaps = 22/258 (8%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
LK +VTG + G+G AV LA GA V + E G V D
Sbjct: 5 LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAE---LGAAVRFRNAD 61
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETT----EFTEEDFSTVMTTNFESA 126
+ A + +F G ++ L+N AGT ++ + F+ + N
Sbjct: 62 VTNEADATAALAFAKQEF-GHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGT 120
Query: 127 YHLSQLA------HPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACE 180
+++ +LA G I+ +S+A + YA+SK + LT A E
Sbjct: 121 FNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAARE 180
Query: 181 WAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPML-RPGEPNEVSSVVAFL 239
A+ IRV T+AP + TP++ + + + + + P R G E +++V +
Sbjct: 181 LARFGIRVVTIAPGIFDTPMMAGMPQ-----DVQDALAASVPFPPRLGRAEEYAALVKHI 235
Query: 240 CLSATSYVTGQVICVDGG 257
C + + + G+VI +DG
Sbjct: 236 CEN--TMLNGEVIRLDGA 251
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207 | Back alignment and structure |
|---|
Score = 141 bits (357), Expect = 8e-42
Identities = 41/223 (18%), Positives = 76/223 (34%), Gaps = 20/223 (8%)
Query: 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKI 73
M L+TG T G+G A L G + R L + +E + DL
Sbjct: 1 MRVLITGATGGLGGAFARALK--GHDLLLSGRRAGALAELARE-----VGARALPADLAD 53
Query: 74 RAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLA 133
+ + L+E G L++L++ G E + ++ + +A +
Sbjct: 54 ELEAKALLEEA-----GPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVL--- 105
Query: 134 HPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAP 193
+ +F + + +P + YA++K A+ + E ++ + + V
Sbjct: 106 -KHARFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRL 164
Query: 194 WVIRTPLLDTVEKDSNFL---EHANRMVLRTPMLRPGE-PNEV 232
+ T L + E A R VL P EV
Sbjct: 165 PAVATGLWAPLGGPPKGALSPEEAARKVLEGLFREPVPALLEV 207
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604 | Back alignment and structure |
|---|
Score = 147 bits (373), Expect = 6e-41
Identities = 67/267 (25%), Positives = 113/267 (42%), Gaps = 34/267 (12%)
Query: 1 MSDFREQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIV---------HTCSRNETELN 51
MS K ++TG G+G E A GA V + N +
Sbjct: 1 MSPVD-----FKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAAD 55
Query: 52 QRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFT 111
+ E G ++ +K++ET F G ++++INNAG + T
Sbjct: 56 VVVDEIVKNGGVAVADYNNV---LDGDKIVETAVKNF-GTVHVIINNAGILRDASMKKMT 111
Query: 112 EEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMN 171
E+D+ V+ + A+ +++ A P + G I+ SS AG+ + YAS+K A+
Sbjct: 112 EKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALL 171
Query: 172 QLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNE 231
+ LA E AK I+ N +AP + R+ + +++ PML P +
Sbjct: 172 GFAETLAKEGAKYNIKANAIAP-LARSRMTESIMPP--------------PMLEKLGPEK 216
Query: 232 VSSVVAFLCLSATSYVTGQVICVDGGY 258
V+ +V +L SA + +TGQ V G+
Sbjct: 217 VAPLVLYLS-SAENELTGQFFEVAAGF 242
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 3e-35
Identities = 60/249 (24%), Positives = 114/249 (45%), Gaps = 23/249 (9%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
LK L+TG G+G + A +GA +V ++ T+ I+ + V
Sbjct: 320 LKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVA 379
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
E +++ V ++ G ++IL+NNAG + + +++++ +V + ++L
Sbjct: 380 K-----DSEAIIKNVIDKY-GTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNL 433
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
S+LA P G II I+S +G+ + Y+SSK + L+K +A E AK+ I+VN
Sbjct: 434 SRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVN 493
Query: 190 TVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTG 249
VAP T + + ++R ++V+ ++ +L + VTG
Sbjct: 494 IVAP-HAETAMTLS--------------IMREQDKNLYHADQVAPLLVYLG-TDDVPVTG 537
Query: 250 QVICVDGGY 258
+ + GG+
Sbjct: 538 ETFEIGGGW 546
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257 | Back alignment and structure |
|---|
Score = 140 bits (354), Expect = 1e-40
Identities = 60/260 (23%), Positives = 107/260 (41%), Gaps = 28/260 (10%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
++ A+VTGG G+G A + L GA V ++ + G + + D
Sbjct: 7 IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADL------GDRARFAAAD 60
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETT----EFTEEDFSTVMTTN---- 122
+ A ++ + G L I++N AGT F+ F ++ N
Sbjct: 61 VTDEAAVASALDLAETM--GTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGS 118
Query: 123 F----ESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLA 178
F +A +++ + G II +SVA + Y++SK + +T +A
Sbjct: 119 FNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIA 178
Query: 179 CEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPML-RPGEPNEVSSVVA 237
+ A +IRV T+AP + TPLL ++ ++ + V P R G P+E ++
Sbjct: 179 RDLASHRIRVMTIAPGLFDTPLLASLPEE--ARASLGKQV---PHPSRLGNPDEYGALAV 233
Query: 238 FLCLSATSYVTGQVICVDGG 257
+ + G+VI +DG
Sbjct: 234 HII--ENPMLNGEVIRLDGA 251
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234 | Back alignment and structure |
|---|
Score = 136 bits (345), Expect = 1e-39
Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 5/203 (2%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
L+TG ++GIG A L A G V +R+E +R+Q ++
Sbjct: 2 EGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDE----KRLQALAAELEGALPLPG 57
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
D++ + + + F G+L+ L+NNAG + K E T E++ V+ TN A+
Sbjct: 58 DVREEGDWARAVAAMEEAF-GELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLG 116
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
+ A P L G G I+ + S+AG + Y +SK + L + + +RV
Sbjct: 117 IRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVV 176
Query: 190 TVAPWVIRTPLLDTVEKDSNFLE 212
V P + T + L+
Sbjct: 177 NVLPGSVDTGFAGNTPGQAWKLK 199
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319 | Back alignment and structure |
|---|
Score = 138 bits (349), Expect = 2e-39
Identities = 49/224 (21%), Positives = 104/224 (46%), Gaps = 9/224 (4%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGS 67
G TA VTGG G+G +V +L G V + +++ + +++ G +V G
Sbjct: 5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGV 64
Query: 68 VCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAY 127
D+ R + + V ++F G ++IL NNAG + + E + +D+ ++ N
Sbjct: 65 QLDVASREGFKMAADEVEARF-GPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVV 123
Query: 128 HLSQLAHPLLKSA------GNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEW 181
+ P + G+++ +S+A +A IY ++K A+ L+++L
Sbjct: 124 NGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSL 183
Query: 182 AKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLR 225
K +I V+ + P ++++ + + + + L+ + V +T + R
Sbjct: 184 LKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVER 227
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319 | Back alignment and structure |
|---|
Score = 137 bits (346), Expect = 6e-39
Identities = 54/258 (20%), Positives = 112/258 (43%), Gaps = 29/258 (11%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIV---------HTCSRNETELNQRIQEWKSK 60
G LVTG G+G A A GA+V + + ++ ++E + +
Sbjct: 6 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR 65
Query: 61 GLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMT 120
G + + + EKL++T F G++++++NNAG + + ++ED+ +
Sbjct: 66 GGKAVANYDSV---EAGEKLVKTALDTF-GRIDVVVNNAGILRDRSFSRISDEDWDIIQR 121
Query: 121 TNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACE 180
+ ++ +++ A +K G II +S +G+ + Y+++K+ + L L E
Sbjct: 122 VHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIE 181
Query: 181 WAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC 240
K+ I NT+AP + + +TV + ++ +P V+ +V +LC
Sbjct: 182 GRKNNIHCNTIAP-NAGSRMTETVMPED--------------LVEALKPEYVAPLVLWLC 226
Query: 241 LSATSYVTGQVICVDGGY 258
+ G + V G+
Sbjct: 227 -HESCEENGGLFEVGAGW 243
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 2e-38
Identities = 59/254 (23%), Positives = 97/254 (38%), Gaps = 32/254 (12%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR 74
+ALVTGG G+G A L A G V +G + D+
Sbjct: 4 SALVTGGASGLGRAAALALKARGYRVVVLDLRR------------EGEDLIYVEGDVTRE 51
Query: 75 AQREKLMETVSSQFDGKLNILINNAGTFIPKETT----EFTEEDFSTVMTTNFESAYHLS 130
+ + + L +++ AG + ++ E F V+ N +++
Sbjct: 52 EDVRRAVARAQEE--APLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVL 109
Query: 131 QLAHPL------LKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKD 184
+LA G I+ +SVA + YA+SK + LT A E A
Sbjct: 110 RLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGW 169
Query: 185 KIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPML-RPGEPNEVSSVVAFLCLSA 243
IRV TVAP + TPLL + + + + + P R G P E +++V +
Sbjct: 170 GIRVVTVAPGLFDTPLLQGLPE-----KAKASLAAQVPFPPRLGRPEEYAALVLHIL--E 222
Query: 244 TSYVTGQVICVDGG 257
+ G+V+ +DG
Sbjct: 223 NPMLNGEVVRLDGA 236
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230 | Back alignment and structure |
|---|
Score = 129 bits (326), Expect = 7e-37
Identities = 40/224 (17%), Positives = 85/224 (37%), Gaps = 21/224 (9%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR 74
++TG + G+G + + A G + R+E++L+ + DL
Sbjct: 3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYR---ARDLASH 59
Query: 75 AQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAH 134
+ E+L E Q D + ++++AG+ E E T++ N SA ++ +
Sbjct: 60 QEVEQLFE----QLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELV 115
Query: 135 PLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPW 194
K N++ I S A S Y + K A+ L +++ E +++ V P
Sbjct: 116 KRYK-DQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPG 174
Query: 195 VIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAF 238
+ T F E + + + + + + + ++
Sbjct: 175 GMAT----------EFWETSGKSLDTSSFM---SAEDAALMIHG 205
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 1e-36
Identities = 50/204 (24%), Positives = 84/204 (41%), Gaps = 22/204 (10%)
Query: 15 TALVTGGTKGIGYAVVEELAAF---GAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDL 71
+ L+TG +G+G +V+ L + T RN + + +++ + DL
Sbjct: 23 SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQ-AKELEDLAKNHSNIHILEIDL 81
Query: 72 KIRAQREKLMETVSSQF-DGKLNILINNAGTFIPKET-TEFTEEDFSTVMTTNFESAYHL 129
+ +KL+ + D LN+L NNAG T ++ + TN L
Sbjct: 82 RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIML 141
Query: 130 SQLAHPLLK-----------SAGNGNIIFISSVAGVIAIPM---CSIYASSKVAMNQLTK 175
++ PLLK G II +SS+ G I Y +SK A+N TK
Sbjct: 142 AKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATK 201
Query: 176 NLACEWAKDKIRVNTVAP-WVIRT 198
+L+ + +I ++ P WV +T
Sbjct: 202 SLSVDLYPQRIMCVSLHPGWV-KT 224
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 2e-35
Identities = 51/207 (24%), Positives = 78/207 (37%), Gaps = 27/207 (13%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAI--VHTCSRNETELNQRIQEWKSKGLQVSGSVCDLK 72
+ +VTG +GIG +V++L I + +R+ + + K +V +
Sbjct: 5 SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI---KDSRVHVLPLTVT 61
Query: 73 IRAQREKLMETVSSQFDG-KLNILINNAGTFIPKET-TEFTEEDFSTVMTTNFESAYHLS 130
+ + V L++LINNAG + T TE + + N S L+
Sbjct: 62 CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLT 121
Query: 131 QLAHPLLK-----------SAGNGNIIFISSVAGVIAIPM-------CSIYASSKVAMNQ 172
Q PLLK S +I ISS G I Y SK A+N
Sbjct: 122 QKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINM 181
Query: 173 LTKNLACEWAKDKIRVNTVAP-WVIRT 198
+ LA + D + V P WV +T
Sbjct: 182 FGRTLAVDLKDDNVLVVNFCPGWV-QT 207
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248 | Back alignment and structure |
|---|
Score = 123 bits (311), Expect = 2e-34
Identities = 49/193 (25%), Positives = 94/193 (48%), Gaps = 7/193 (3%)
Query: 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGSVCDLK 72
M LVTG T G G + G V R + +R+QE K + G + + D++
Sbjct: 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQ----ERLQELKDELGDNLYIAQLDVR 56
Query: 73 IRAQREKLMETVSSQFDGKLNILINNAGTFIPKET-TEFTEEDFSTVMTTNFESAYHLSQ 131
RA E+++ ++ +++ ++IL+NNAG + E + + ED+ T++ TN + ++++
Sbjct: 57 NRAAIEEMLASLPAEW-CNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTR 115
Query: 132 LAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTV 191
P + +G+II I S AG ++Y ++K + Q + NL + +RV +
Sbjct: 116 AVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDI 175
Query: 192 APWVIRTPLLDTV 204
P ++ V
Sbjct: 176 EPGLVGGTEFSNV 188
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 2e-34
Identities = 57/210 (27%), Positives = 96/210 (45%), Gaps = 9/210 (4%)
Query: 1 MSDFREQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHT---CSRNE---TELNQRI 54
MS R+ L T L+TG + GIG A E +R EL + I
Sbjct: 21 MSQGRKAAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTI 80
Query: 55 QEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKET-TEFTEE 113
+ + +V + D+ + + +E + +F ++IL+NNAG + + + E
Sbjct: 81 DQ-EFPNAKVHVAQLDITQAEKIKPFIENLPQEF-KDIDILVNNAGKALGSDRVGQIATE 138
Query: 114 DFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQL 173
D V TN + +++Q P+ ++ +G+I+ + S+AG A P SIY +SK A+
Sbjct: 139 DIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAF 198
Query: 174 TKNLACEWAKDKIRVNTVAPWVIRTPLLDT 203
T +L E KIRV +AP ++ T
Sbjct: 199 TDSLRKELINTKIRVILIAPGLVETEFSLV 228
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 5e-34
Identities = 55/258 (21%), Positives = 104/258 (40%), Gaps = 29/258 (11%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIV---------HTCSRNETELNQRIQEWKSK 60
G A+VTG G+G A GA V ++ + + E +
Sbjct: 16 RYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKA 75
Query: 61 GLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMT 120
G + + K++ET F G+++IL+NNAG + + +E+D++ V
Sbjct: 76 GGEAVADYNSV---IDGAKVIETAIKAF-GRVDILVNNAGILRDRSLVKTSEQDWNLVND 131
Query: 121 TNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACE 180
+ + ++ +Q A P +K G II SS +G+ Y ++K+ + L +A E
Sbjct: 132 VHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIE 191
Query: 181 WAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC 240
A++ + N + P + + + + D + +P ++ VVA+LC
Sbjct: 192 GARNNVLCNVIVP-TAASRMTEGILPDI--------------LFNELKPKLIAPVVAYLC 236
Query: 241 LSATSYVTGQVICVDGGY 258
+ G I G+
Sbjct: 237 -HESCEDNGSYIESAAGW 253
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 5e-34
Identities = 52/195 (26%), Positives = 93/195 (47%), Gaps = 2/195 (1%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
+L+G AL+TG + GIG A LAA GA V +R +L E + G +V
Sbjct: 4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLEL 63
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
D+ R + + + G L+IL+NNAG + + D++ ++ TN ++
Sbjct: 64 DVADRQGVDAAVASTVEAL-GGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYM 122
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
++ A P L G ++ +SS+AG + + ++Y ++K +N ++ L E + +RV
Sbjct: 123 TRAALPHLL-RSKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVRVV 181
Query: 190 TVAPWVIRTPLLDTV 204
+ P T L +
Sbjct: 182 VIEPGTTDTELRGHI 196
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 1e-33
Identities = 45/196 (22%), Positives = 82/196 (41%), Gaps = 5/196 (2%)
Query: 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE-WKSKGLQVSGSVCDL 71
A++TG ++GIG A+ LA G + +R+ L + E + +G++V D+
Sbjct: 2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDV 61
Query: 72 KIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQ 131
E+ + V +F G +++++ NAG K E +EE+F ++ N + +
Sbjct: 62 SKAESVEEFSKKVLERF-GDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLK 120
Query: 132 LAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTV 191
LK G ++ S V+ IP Y S+K A L + E +R +
Sbjct: 121 AFLDSLKRTGGLALVTTSDVSAR-LIPYGGGYVSTKWAARALVRTFQIE--NPDVRFFEL 177
Query: 192 APWVIRTPLLDTVEKD 207
P + T +
Sbjct: 178 RPGAVDTYFGGSKPGK 193
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 3e-33
Identities = 42/204 (20%), Positives = 85/204 (41%), Gaps = 7/204 (3%)
Query: 1 MSDFREQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK 60
M+ ++ ++TG + GIG A+ + G + +R +R++
Sbjct: 4 MTGGQQMGRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRV----ERLKALNLP 59
Query: 61 GLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMT 120
+ D+ + + + + G + ++NNAG + + ++ +
Sbjct: 60 --NTLCAQVDVTDKYTFDTAITRAEKIY-GPADAIVNNAGMMLLGQIDTQEANEWQRMFD 116
Query: 121 TNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACE 180
N + Q +K+ G II ISS+AG P + Y +K A++ +++N+ E
Sbjct: 117 VNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREE 176
Query: 181 WAKDKIRVNTVAPWVIRTPLLDTV 204
A +RV T+AP ++T LL
Sbjct: 177 VAASNVRVMTIAPSAVKTELLSHT 200
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 4e-33
Identities = 43/196 (21%), Positives = 84/196 (42%), Gaps = 3/196 (1%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
+ L+TG + GIG + EL GA + +R + + E + G V D
Sbjct: 2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLD 61
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
+ R + + G++++L+NNAG +++ ++ N +
Sbjct: 62 VTDRHSVAAFAQAAVDTW-GRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGI 120
Query: 131 QLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNT 190
P++++ +G II I S+ + +P ++Y ++K A+ ++ L E IRV
Sbjct: 121 GAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE--STNIRVTC 178
Query: 191 VAPWVIRTPLLDTVEK 206
V P V+ + L T+
Sbjct: 179 VNPGVVESELAGTITH 194
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 7e-33
Identities = 51/196 (26%), Positives = 83/196 (42%), Gaps = 4/196 (2%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
S T +TG T G G A A G + R E L E +K +V
Sbjct: 18 SHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKT-RVLPLTL 76
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKET-TEFTEEDFSTVMTTNFESAYH 128
D++ RA ++ + +F L LINNAG + + +D+ T++ TN + +
Sbjct: 77 DVRDRAAMSAAVDNLPEEF-ATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLY 135
Query: 129 LSQLAHPLLKSAGNGN-IIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
++L P L + G G I+ + SVAG P +Y +K + Q + NL C+ +R
Sbjct: 136 STRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVR 195
Query: 188 VNTVAPWVIRTPLLDT 203
V + P + +
Sbjct: 196 VTNLEPGLCESEFSLV 211
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 1e-32
Identities = 55/237 (23%), Positives = 90/237 (37%), Gaps = 49/237 (20%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAA-FGAIVHTCSRNETELNQRIQEWKSKGLQVSGSV 68
S ALVTGG KGIG A+V +L F V +R+ T +Q+ +++GL
Sbjct: 1 SSGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQ 60
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYH 128
D+ L + + ++ G L++L+NNAG M TNF
Sbjct: 61 LDIDDLQSIRALRDFLRKEY-GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRD 119
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCS--------------------------- 161
+ PL+K G ++ +SS+ V A+ CS
Sbjct: 120 VCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVED 177
Query: 162 --------------IYASSKVAMNQLTKNLACEWAK----DKIRVNTVAPWVIRTPL 200
Y +K+ + L++ A + ++ DKI +N P +RT +
Sbjct: 178 TKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM 234
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 1e-32
Identities = 61/234 (26%), Positives = 102/234 (43%), Gaps = 13/234 (5%)
Query: 1 MSDFREQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK 60
M+ +RW + ALVTG + GIG AV L G V C+R + + E KS
Sbjct: 22 MARPGMERW--RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSA 79
Query: 61 GL--QVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTV 118
G + CDL + + SQ ++I INNAG P + + +
Sbjct: 80 GYPGTLIPYRCDLSNEEDILSMFSAIRSQH-SGVDICINNAGLARPDTLLSGSTSGWKDM 138
Query: 119 MTTNFESAYHLSQLAHPLLK--SAGNGNIIFISSVAG--VIAIPMCSIYASSKVAMNQLT 174
N + ++ A+ +K + +G+II I+S++G V+ + + Y+++K A+ LT
Sbjct: 139 FNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALT 198
Query: 175 KNLACEW--AKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRP 226
+ L E A+ IR ++P V+ T + E A + L+P
Sbjct: 199 EGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDP--EKAAATYEQMKCLKP 250
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 2e-31
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 4/189 (2%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR 74
LVTG + G G A+ E A G V +R L+ + + + +S D+
Sbjct: 7 VWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAIS---LDVTDG 63
Query: 75 AQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAH 134
+ + + V +++ G++++L+NNAG E TE + + + L++
Sbjct: 64 ERIDVVAADVLARY-GRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALL 122
Query: 135 PLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPW 194
P ++ G+G+++ ISS G ++ S Y+++K A+ QL++ LA E A I+V V P
Sbjct: 123 PQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPG 182
Query: 195 VIRTPLLDT 203
RT L
Sbjct: 183 AFRTNLFGK 191
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 5e-29
Identities = 45/192 (23%), Positives = 87/192 (45%), Gaps = 11/192 (5%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE-----WKSKGLQVSGSVC 69
L+TG + G G E LA G V+ R+ N E + + +
Sbjct: 7 IILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLEL 66
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAG--TFIPKETTEFTEEDFSTVMTTNFESAY 127
D++ + ++ ++ + + G++++LI+NAG F P E FT E F+ + N S
Sbjct: 67 DVQSQVSVDRAIDQIIGED-GRIDVLIHNAGHMVFGPAE--AFTPEQFAELYDINVLSTQ 123
Query: 128 HLSQLAHPLLKSAGNGNIIFISSVAGVIAI-PMCSIYASSKVAMNQLTKNLACEWAKDKI 186
+++ A P ++ +G +I+ISS + P + Y ++K AM+ + A E ++ I
Sbjct: 124 RVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYFAAKAAMDAIAVQYARELSRWGI 183
Query: 187 RVNTVAPWVIRT 198
+ + P +
Sbjct: 184 ETSIIVPGAFTS 195
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 1e-28
Identities = 54/266 (20%), Positives = 98/266 (36%), Gaps = 78/266 (29%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL-QVSGSV 68
K A+VTGG KGIG+ + ++L++ G +V R+ T+ ++ +++ K+ V
Sbjct: 9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQ 68
Query: 69 CDL-KIRAQREKLMETVSSQFDGKLNILINNAG-TFIPKETTEF---------------- 110
D+ A L + + + F GKL+IL+NNAG + F
Sbjct: 69 LDVTDPIATMSSLADFIKTHF-GKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVK 127
Query: 111 -------------TEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI 157
T E + N+ ++++ PLL+ + + I+ +SS G +
Sbjct: 128 IYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKY 187
Query: 158 PMCSI-------------------------------------------YASSKVAMNQLT 174
Y +SK +N T
Sbjct: 188 VSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYT 247
Query: 175 KNLACEWAKDKIRVNTVAPWVIRTPL 200
+ LA + K +VN V P +++T +
Sbjct: 248 RVLANKI--PKFQVNCVCPGLVKTEM 271
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 107 bits (268), Expect = 1e-27
Identities = 40/196 (20%), Positives = 83/196 (42%), Gaps = 9/196 (4%)
Query: 15 TALVTGGTKGIGYAVVEELAAF---GAIVHTCSRNE---TELNQRIQEWKSKGLQVSGSV 68
L+TG + GIG + LA+ V+ R+ L + + +
Sbjct: 4 VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQ 63
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYH 128
D++ E V+ +G++++L+ NAG + E+ ++V+ N
Sbjct: 64 LDVRDSKSVAAARERVT---EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVR 120
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
+ Q P +K G+G ++ SV G++ +P +Y +SK A+ L ++LA + +
Sbjct: 121 MLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHL 180
Query: 189 NTVAPWVIRTPLLDTV 204
+ + + T ++ V
Sbjct: 181 SLIECGPVHTAFMEKV 196
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261 | Back alignment and structure |
|---|
Score = 84.5 bits (210), Expect = 1e-19
Identities = 62/267 (23%), Positives = 110/267 (41%), Gaps = 31/267 (11%)
Query: 11 LKGMTALVTG--GTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGS 67
L G ALV G + +G+A+ +L GA + + +R++ K + G
Sbjct: 6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSY------QAERLRPEAEKLAEALGG 59
Query: 68 V----CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKET-----TEFTEEDFSTV 118
D+ + + L V F G L+ L++ F P+E + +D+
Sbjct: 60 ALLFRADVTQDEELDALFAGVKEAF-GGLDYLVHAIA-FAPREAMEGRYIDTRRQDWLLA 117
Query: 119 MTTNFESAY---HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTK 175
+ SAY +++ A PLL+ G I+ ++ A +P ++ A +K A+ +
Sbjct: 118 LEV---SAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKYNVMAIAKAALEASVR 172
Query: 176 NLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSV 235
LA E +RVN ++ +RT + + P+ R EV ++
Sbjct: 173 YLAYELGPKGVRVNAISAGPVRT-VAARSIPGFTKMYDRVAQ--TAPLRRNITQEEVGNL 229
Query: 236 VAFLCLSATSYVTGQVICVDGGYSVTG 262
FL S +TG+V+ VD GY + G
Sbjct: 230 GLFLLSPLASGITGEVVYVDAGYHIMG 256
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266 | Back alignment and structure |
|---|
Score = 84.2 bits (209), Expect = 1e-19
Identities = 61/265 (23%), Positives = 112/265 (42%), Gaps = 25/265 (9%)
Query: 11 LKGMTALVTG--GTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSV 68
L+G +V G + I + + L GA + E L + + E + L + S+
Sbjct: 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGER-LEKSVHEL-AGTLDRNDSI 62
Query: 69 ---CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKET-----TEFTEEDFSTVMT 120
CD+ A+ E ++ Q G ++ + + F KE + F
Sbjct: 63 ILPCDVTNDAEIETCFASIKEQV-GVIHGIAHCIA-FANKEELVGEYLNTNRDGFLLAHN 120
Query: 121 TNFESAY---HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNL 177
S+Y + + A P++ G+I+ ++ + G + +P ++ +K +++ K L
Sbjct: 121 I---SSYSLTAVVKAARPMMTE--GGSIVTLTYLGGELVMPNYNVMGVAKASLDASVKYL 175
Query: 178 ACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVA 237
A + K+ IRVN+++ IRT L D N + R P+ R P EV A
Sbjct: 176 AADLGKENIRVNSISAGPIRT-LSAKGISDFNSILKDIE--ERAPLRRTTTPEEVGDTAA 232
Query: 238 FLCLSATSYVTGQVICVDGGYSVTG 262
FL + +TG+ + VD G+ +T
Sbjct: 233 FLFSDMSRGITGENLHVDSGFHITA 257
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285 | Back alignment and structure |
|---|
Score = 83.4 bits (207), Expect = 4e-19
Identities = 59/267 (22%), Positives = 110/267 (41%), Gaps = 30/267 (11%)
Query: 11 LKGMTALVTG--GTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGS 67
L+G AL+TG + I Y + + GA + T ++++ + + GS
Sbjct: 19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTY------ATPKLEKRVREIAKGFGS 72
Query: 68 V----CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKET-----TEFTEEDFSTV 118
CD+ + + L + + + G L+I++++ + PKE + + E F
Sbjct: 73 DLVVKCDVSLDEDIKNLKKFLEENW-GSLDIIVHSIA-YAPKEEFKGGVIDTSREGFKIA 130
Query: 119 MTTNFESAY---HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTK 175
M S Y L++ PL++ G I+ +S +P ++ +K A+ +
Sbjct: 131 MDI---SVYSLIALTRELLPLMEGRN-GAIVTLSYYGAEKVVPHYNVMGIAKAALESTVR 186
Query: 176 NLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSV 235
LA + AK R+N ++ ++T L + L P +P +V
Sbjct: 187 YLAYDIAKHGHRINAISAGPVKT-LAAYSITGFHLLMEHTTK--VNPFGKPITIEDVGDT 243
Query: 236 VAFLCLSATSYVTGQVICVDGGYSVTG 262
FLC +TG+V+ VD GY + G
Sbjct: 244 AVFLCSDWARAITGEVVHVDNGYHIMG 270
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275 | Back alignment and structure |
|---|
Score = 83.0 bits (206), Expect = 4e-19
Identities = 65/267 (24%), Positives = 110/267 (41%), Gaps = 31/267 (11%)
Query: 11 LKGMTALVTG--GTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGS 67
LKG L+ G K I Y + + GA + T LN+ +++ Q S
Sbjct: 4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTY------LNESLEKRVRPIAQELNS 57
Query: 68 V----CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKET-----TEFTEEDFSTV 118
D+ + L +V G L+ ++++ F PKE E ++ F+T
Sbjct: 58 PYVYELDVSKEEHFKSLYNSVKKDL-GSLDFIVHSVA-FAPKEALEGSLLETSKSAFNTA 115
Query: 119 MTTNFESAY---HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTK 175
M S Y L+ PLL + +++ +S + + ++ +K A+ +
Sbjct: 116 MEI---SVYSLIELTNTLKPLLNN--GASVLTLSYLGSTKYMAHYNVMGLAKAALESAVR 170
Query: 176 NLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSV 235
LA + K IRVN ++ IRT L + D + N + P+ + EV +
Sbjct: 171 YLAVDLGKHHIRVNALSAGPIRT-LASSGIADFRMILKWNEI--NAPLRKNVSLEEVGNA 227
Query: 236 VAFLCLSATSYVTGQVICVDGGYSVTG 262
+L S +S V+G+V VD GY V G
Sbjct: 228 GMYLLSSLSSGVSGEVHFVDAGYHVMG 254
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280 | Back alignment and structure |
|---|
Score = 83.0 bits (206), Expect = 5e-19
Identities = 57/268 (21%), Positives = 111/268 (41%), Gaps = 32/268 (11%)
Query: 11 LKGMTALVTG--GTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRI----QEWKSKGLQ 63
L G L+TG K I Y + + + GA + T + R+ E+ +
Sbjct: 24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTY---VGQFKDRVEKLCAEFNPAAVL 80
Query: 64 VSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKE------TTEFTEEDFST 117
CD+ + + L + + L+ ++++ F P++ T E FS
Sbjct: 81 P----CDVISDQEIKDLFVELGKVW-DGLDAIVHSIA-FAPRDQLEGNFIDCVTREGFSI 134
Query: 118 VMTTNFESAY---HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLT 174
SAY L++ ++K+ +++ ++ + A+P + +K ++
Sbjct: 135 AHDI---SAYSFAALAKEGRSMMKNRN-ASMVALTYIGAEKAMPSYNTMGVAKASLEATV 190
Query: 175 KNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSS 234
+ A +D I+VN V+ I+T L + + + N M +P+ + + EV +
Sbjct: 191 RYTALALGEDGIKVNAVSAGPIKT-LAASGISNFKKMLDYNAM--VSPLKKNVDIMEVGN 247
Query: 235 VVAFLCLSATSYVTGQVICVDGGYSVTG 262
VAFLC + +TG+V+ VD GY
Sbjct: 248 TVAFLCSDMATGITGEVVHVDAGYHCVS 275
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265 | Back alignment and structure |
|---|
Score = 82.6 bits (205), Expect = 7e-19
Identities = 58/268 (21%), Positives = 111/268 (41%), Gaps = 32/268 (11%)
Query: 11 LKGMTALVTG--GTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRI----QEWKSKGLQ 63
L G LVTG I Y + + + GA + T +N+ L R+ + S +
Sbjct: 7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTY-QNDK-LKGRVEEFAAQLGSDIVL 64
Query: 64 VSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTE------FTEEDFST 117
CD+ A + + + + K + +++ G F P + + T E F
Sbjct: 65 Q----CDVAEDASIDTMFAELGKVW-PKFDGFVHSIG-FAPGDQLDGDYVNAVTREGFKI 118
Query: 118 VMTTNFESAY---HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLT 174
S+Y +++ +L ++ +S + AIP ++ +K ++
Sbjct: 119 AHDI---SSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVMGLAKASLEANV 173
Query: 175 KNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSS 234
+ +A + +RVN ++ IRT L + KD + TP+ R +V +
Sbjct: 174 RYMANAMGPEGVRVNAISAGPIRT-LAASGIKDFRKMLAHCEA--VTPIRRTVTIEDVGN 230
Query: 235 VVAFLCLSATSYVTGQVICVDGGYSVTG 262
AFLC ++ ++G+V+ VDGG+S+
Sbjct: 231 SAAFLCSDLSAGISGEVVHVDGGFSIAA 258
|
| >4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282 | Back alignment and structure |
|---|
Score = 81.9 bits (203), Expect = 1e-18
Identities = 56/263 (21%), Positives = 104/263 (39%), Gaps = 25/263 (9%)
Query: 11 LKGMTALVTG--GTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSV 68
L+ T ++ G + I + V + L GA + R E + +++ + L +
Sbjct: 30 LENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKER-SRKELEKL-LEQLNQPEAH 87
Query: 69 ---CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKET-----TEFTEEDFSTVMT 120
D++ + E + G ++ + ++ F E +E + E F
Sbjct: 88 LYQIDVQSDEEVINGFEQIGKDV-GNIDGVYHSIA-FANMEDLRGRFSETSREGFLLAQD 145
Query: 121 TNFESAY---HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNL 177
S+Y ++ A L+ G+I+ + + G A+ ++ +K ++ K L
Sbjct: 146 I---SSYSLTIVAHEAKKLMPE--GGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYL 200
Query: 178 ACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVA 237
A + D IRVN ++ IRT L N + R P+ R + EV A
Sbjct: 201 ALDLGPDNIRVNAISAGPIRT-LSAKGVGGFNTILKEIEE--RAPLKRNVDQVEVGKTAA 257
Query: 238 FLCLSATSYVTGQVICVDGGYSV 260
+L +S VTG+ I VD G+
Sbjct: 258 YLLSDLSSGVTGENIHVDSGFHA 280
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296 | Back alignment and structure |
|---|
Score = 81.1 bits (201), Expect = 3e-18
Identities = 54/267 (20%), Positives = 112/267 (41%), Gaps = 31/267 (11%)
Query: 11 LKGMTALVTG--GTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGS 67
++G ++ G K + + + + + A GA + T L++ ++ + G
Sbjct: 28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTY------LSETFKKRVDPLAESLGV 81
Query: 68 V----CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKET-----TEFTEEDFSTV 118
CD+ + + + ++ ++ G L+ +++ F K + + +F T
Sbjct: 82 KLTVPCDVSDAESVDNMFKVLAEEW-GSLDFVVHAVA-FSDKNELKGRYVDTSLGNFLTS 139
Query: 119 MTTNFESAY---HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTK 175
M S Y +++ A PL+ G+I+ +S +P ++ K A+ K
Sbjct: 140 MHI---SCYSFTYIASKAEPLMT--NGGSILTLSYYGAEKVVPHYNVMGVCKAALEASVK 194
Query: 176 NLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSV 235
LA + K +IRVN ++ +RT L + D +++ N+ +P+ R ++V
Sbjct: 195 YLAVDLGKQQIRVNAISAGPVRT-LASSGISDFHYILTWNK--YNSPLRRNTTLDDVGGA 251
Query: 236 VAFLCLSATSYVTGQVICVDGGYSVTG 262
+L TG+ + VD GY V G
Sbjct: 252 ALYLLSDLGRGTTGETVHVDCGYHVVG 278
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293 | Back alignment and structure |
|---|
Score = 81.1 bits (201), Expect = 3e-18
Identities = 60/267 (22%), Positives = 110/267 (41%), Gaps = 31/267 (11%)
Query: 11 LKGMTALVTG--GTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGS 67
L+G L+ G + I + + + GA + T +++ + G+
Sbjct: 29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTY------QGDALKKRVEPLAEELGA 82
Query: 68 V----CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKET-----TEFTEEDFSTV 118
CD+ A + + ET+ ++ GKL+ L++ G F K+ + +E +F+
Sbjct: 83 FVAGHCDVADAASIDAVFETLEKKW-GKLDFLVHAIG-FSDKDELTGRYIDTSEANFTNT 140
Query: 119 MTTNFESAY---HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTK 175
M S Y +S+ A L+ G+I+ ++ +P ++ +K A+ K
Sbjct: 141 MLI---SVYSLTAVSRRAEKLMAD--GGSILTLTYYGAEKVMPNYNVMGVAKAALEASVK 195
Query: 176 NLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSV 235
LA + IRVN ++ I+T L + D ++ N P+ R +EV V
Sbjct: 196 YLAVDLGPQNIRVNAISAGPIKT-LAASGIGDFRYILKWNE--YNAPLRRTVTIDEVGDV 252
Query: 236 VAFLCLSATSYVTGQVICVDGGYSVTG 262
+ + VTG+V D GY V G
Sbjct: 253 GLYFLSDLSRSVTGEVHHADSGYHVIG 279
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271 | Back alignment and structure |
|---|
Score = 79.9 bits (198), Expect = 5e-18
Identities = 62/268 (23%), Positives = 111/268 (41%), Gaps = 32/268 (11%)
Query: 11 LKGMTALVTG--GTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGS 67
L G L+TG + I Y + + GA + T + R ++ ++ GS
Sbjct: 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTY------VGDRFKDRITEFAAEFGS 65
Query: 68 V----CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKE------TTEFTEEDFST 117
CD+ AQ + L ++ + + L+ L+++ G F P+E T E+F
Sbjct: 66 ELVFPCDVADDAQIDALFASLKTHW-DSLDGLVHSIG-FAPREAIAGDFLDGLTRENFRI 123
Query: 118 VMTTNFESAY---HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLT 174
SAY L++ A P+L + +++ +S + AIP + +K A+
Sbjct: 124 AHDI---SAYSFPALAKAALPMLSD--DASLLTLSYLGAERAIPNYNTMGLAKAALEASV 178
Query: 175 KNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSS 234
+ LA +RVN ++ I+T L + K + +P+ R +V +
Sbjct: 179 RYLAVSLGAKGVRVNAISAGPIKT-LAASGIKSFGKILDFVES--NSPLKRNVTIEQVGN 235
Query: 235 VVAFLCLSATSYVTGQVICVDGGYSVTG 262
AFL S VT +V+ VD G++
Sbjct: 236 AGAFLLSDLASGVTAEVMHVDSGFNAVV 263
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269 | Back alignment and structure |
|---|
Score = 75.0 bits (185), Expect = 4e-16
Identities = 56/285 (19%), Positives = 93/285 (32%), Gaps = 54/285 (18%)
Query: 11 LKGMTALVTG--GTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSV 68
L G LV+G I + + GA + + L QRI + L +
Sbjct: 5 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRI----TDRLPAKAPL 60
Query: 69 --CDLKIRAQREKLMETVSSQF--DGKLNILINNAGTFIPKET------TEFTEEDFSTV 118
D++ L V+ KL+ ++++ G F+P+ + D S
Sbjct: 61 LELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIG-FMPQTGMGINPFFDAPYADVSKG 119
Query: 119 MTTNFESAY---HLSQLAHPLLKSAGNGNII---FISS-------VAGVIAIPMCSIYAS 165
+ SAY +++ P++ G+I+ F S V
Sbjct: 120 IHI---SAYSYASMAKALLPIMNP--GGSIVGMDFDPSRAMPAYNWMTV----------- 163
Query: 166 SKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRT-------PLLDTVEKDSNFLEHANRMV 218
+K A+ + + +A E K +R N VA IRT E +
Sbjct: 164 AKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWD 223
Query: 219 LRTPMLR-PGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVTG 262
R P+ + V+ V L TG +I DGG
Sbjct: 224 QRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHTQL 268
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* Length = 315 | Back alignment and structure |
|---|
Score = 73.3 bits (180), Expect = 2e-15
Identities = 59/303 (19%), Positives = 109/303 (35%), Gaps = 62/303 (20%)
Query: 10 SLKGMTALVTG--GTKGIGYAVVEELAAFGAIV-------HTCSRNETELNQRIQEWKSK 60
L+G TA V G + G G+A+ + LA+ GA V ++ + R+ E +
Sbjct: 6 DLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKL 65
Query: 61 GLQVSGSV-----------------CDLKIRAQR--------EKLMETVSSQFDGKLNIL 95
D+K + +++ V G ++IL
Sbjct: 66 PDGSLIEFAGVYPLDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDL-GNIDIL 124
Query: 96 INNAGTFIPKETTEFTE---EDFSTVMTTNFESAY---HLSQLAHPLLKSAGNGNIIFIS 149
+++ P+ T E + + + SAY L Q P++ G+ + +S
Sbjct: 125 VHSLA-NGPEVTKPLLETSRKGYLAASSN---SAYSFVSLLQHFGPIMNE--GGSAVTLS 178
Query: 150 SVAGVIAIP-----MCSIYASSKVAMNQLTKNLACEW-AKDKIRVNTVAPWVIRTPLLDT 203
+A +P M +S+K A+ T+ LA E K +RVN ++ +++ +
Sbjct: 179 YLAAERVVPGYGGGM----SSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKS-RAAS 233
Query: 204 VEKDSNFLEHANRMV----LRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYS 259
S + + P+ R ++V FL V+G + VD G
Sbjct: 234 AIGKSGEKSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLH 293
Query: 260 VTG 262
G
Sbjct: 294 AMG 296
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291 | Back alignment and structure |
|---|
Score = 72.6 bits (179), Expect = 3e-15
Identities = 54/236 (22%), Positives = 81/236 (34%), Gaps = 43/236 (18%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
S T ++TG G+G ELA GA V R+ + + QV
Sbjct: 13 SFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAG---QVEVREL 69
Query: 70 DL----KIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFES 125
DL +R + ++LINNAG T + F + + TN
Sbjct: 70 DLQDLSSVRR--------FADGVS-GADVLINNAGIMAVPYAL--TVDGFESQIGTNHLG 118
Query: 126 AYHLSQLAHPLLKSAGNGNIIFISSVA---GVIAI-----------PMCSIYASSKVAMN 171
+ L+ L P L ++ +SS+A G I + P + Y+ SK+A N
Sbjct: 119 HFALTNLLLPRLTDR----VVTVSSMAHWPGRINLEDLNWRSRRYSPWLA-YSQSKLA-N 172
Query: 172 QL-TKNLA--CEWAKDKIRVNTVAPWVIRTPLLDTVEKD--SNFLEHANRMVLRTP 222
L T L A +R P T L + + A R+V
Sbjct: 173 LLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALMSAATRVVATDA 228
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* Length = 297 | Back alignment and structure |
|---|
Score = 70.5 bits (173), Expect = 2e-14
Identities = 62/299 (20%), Positives = 108/299 (36%), Gaps = 60/299 (20%)
Query: 10 SLKGMTALVTG--GTKGIGYAVVEELAAFGA----------IVHTCSRNETELNQRIQEW 57
L+G A + G G G+AV + LAA GA + + + +
Sbjct: 5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVL 64
Query: 58 KSKGLQVSGSV--------------CDLKIRAQR--------EKLMETVSSQFDGKLNIL 95
L V D+K + ++ E V F G ++IL
Sbjct: 65 PDGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDF-GSIDIL 123
Query: 96 INNAGTFIPKETTEFTE---EDFSTVMTTNFESAY---HLSQLAHPLLKSAGNGNIIFIS 149
+++ P+ + E + + ++ S+Y L P++ G I ++
Sbjct: 124 VHSLA-NGPEVSKPLLETSRKGYLAAISA---SSYSFVSLLSHFLPIMNP--GGASISLT 177
Query: 150 SVAGVIAIP-----MCSIYASSKVAMNQLTKNLACEW-AKDKIRVNTVAPWVIRTPLLDT 203
+A IP M +S+K A+ T+ LA E K IRVNT++ + +
Sbjct: 178 YIASERIIPGYGGGM----SSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGS-RAAK 232
Query: 204 VEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVTG 262
+ + + P+ + +EV + AFL S +TG I VD G + G
Sbjct: 233 AIGFIDTMIEYSYN--NAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMG 289
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} Length = 319 | Back alignment and structure |
|---|
Score = 69.9 bits (171), Expect = 5e-14
Identities = 59/315 (18%), Positives = 108/315 (34%), Gaps = 73/315 (23%)
Query: 10 SLKGMTALVTG--GTKGIGYAVVEELAAFGA--------------IVHTCSRNETELNQR 53
L+G TA V G + G G+A+ + L A GA S + +
Sbjct: 6 DLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFY 65
Query: 54 IQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD------------------------ 89
QE SK + + + L + D
Sbjct: 66 AQEPSSKVAAEAAEKPVDLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAE 125
Query: 90 ------GKLNILINNAGTFIPKETTEFTE---EDFSTVMTTNFESAY---HLSQLAHPLL 137
G+++IL+++ P+ T + + + +++ S+Y L Q PL+
Sbjct: 126 AVRADVGQIDILVHSLA-NGPEVTKPLLQTSRKGYLAAVSS---SSYSFVSLLQHFLPLM 181
Query: 138 KSAGNGNIIFISSVAGVIAIP-----MCSIYASSKVAMNQLTKNLACEW-AKDKIRVNTV 191
K G+ + +S +A IP M +S+K A+ + LA E +RVN +
Sbjct: 182 KE--GGSALALSYIASEKVIPGYGGGM----SSAKAALESDCRTLAFEAGRARAVRVNCI 235
Query: 192 APWVIRTPLLDTVEKDSNFLEHANRMV----LRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
+ +++ + + + + P+ + E ++V FL V
Sbjct: 236 SAGPLKS-RAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAV 294
Query: 248 TGQVICVDGGYSVTG 262
TG + VD G G
Sbjct: 295 TGATLYVDNGLHAMG 309
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287 | Back alignment and structure |
|---|
Score = 62.6 bits (152), Expect = 1e-11
Identities = 23/149 (15%), Positives = 46/149 (30%), Gaps = 14/149 (9%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
S+KG A+V GT +G LA GA V C R + + +V+ +
Sbjct: 116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF-KVNVTAA 174
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
+ A R + ++ + + + + + + + Y+
Sbjct: 175 ETADDASRAEAVKGA--------HFVFTAGAIGL----ELLPQAAWQNESSIEIVADYNA 222
Query: 130 SQ-LAHPLLKSAGNGNIIFISSVAGVIAI 157
L + + G G + I
Sbjct: 223 QPPLGIGGIDATDKGKEYGGKRAFGALGI 251
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512 | Back alignment and structure |
|---|
Score = 57.6 bits (139), Expect = 1e-09
Identities = 33/164 (20%), Positives = 61/164 (37%), Gaps = 10/164 (6%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGA--IVHTCSR---NETELNQRIQEWKSKGLQVSGSVC 69
+ ++TGG G G + + L GA +V T SR ++++EW+ +G+QV S
Sbjct: 1886 SYVITGGLGGFGLQLAQWLRLRGAQKLVLT-SRSGIRTGYQARQVREWRRQGVQVLVSTS 1944
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
+ L+ + G + + N A T E F V + +L
Sbjct: 1945 NASSLDGARSLITEATQ--LGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANL 2002
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQL 173
++ + SSV+ + Y + AM ++
Sbjct: 2003 DRVTREACPEL--DYFVIFSSVSCGRGNAGQANYGFANSAMERI 2044
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... Length = 329 | Back alignment and structure |
|---|
Score = 56.8 bits (137), Expect = 1e-09
Identities = 37/247 (14%), Positives = 84/247 (34%), Gaps = 63/247 (25%)
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIP---KETTEFTEEDFSTVMTTNFES 125
++ E + + ++ GK+N+L+++ K+ + + + ++ S
Sbjct: 92 YNMLQNYTIEDVANLIHQKY-GKINMLVHSLA-NAKEVQKDLLNTSRKGYLDALSK---S 146
Query: 126 AY---HLSQLAHPLLKSAGNGNIIFISSVAGVIAIP-----MCSIYASSKVAMNQLTKNL 177
+Y L + ++K +II ++ A +P M +S+K A+ T+ L
Sbjct: 147 SYSLISLCKYFVNIMK--PQSSIISLTYHASQKVVPGYGGGM----SSAKAALESDTRVL 200
Query: 178 ACEW-AKDKIRVNTVAPWVIRT-------------------------------------- 198
A IR+NT++ +++
Sbjct: 201 AYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEK 260
Query: 199 --PLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDG 256
+ + + P+ + ++ SV +FL + +TGQ I VD
Sbjct: 261 EEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQTIYVDN 320
Query: 257 GYSVTGF 263
G ++
Sbjct: 321 GLNIMFL 327
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} Length = 525 | Back alignment and structure |
|---|
Score = 52.9 bits (127), Expect = 3e-08
Identities = 32/164 (19%), Positives = 56/164 (34%), Gaps = 19/164 (11%)
Query: 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQR------------ 53
W G T LVTG + LA GA ++ + + +E +
Sbjct: 247 WWQADG-TVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAG 305
Query: 54 -IQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTE 112
+ E G + CDL +L+ VS L+ +++ T +
Sbjct: 306 LVAELADLGATATVVTCDLTDAEAAARLLAGVSD--AHPLSAVLHLPPTVDSEPLAATDA 363
Query: 113 EDFSTVMTTNFESAYHLSQL-AHPLLKSAGNGNIIFISSVAGVI 155
+ + V+T +A HL +L ++ SSVA +
Sbjct: 364 DALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIW 407
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* Length = 496 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 2e-07
Identities = 44/158 (27%), Positives = 64/158 (40%), Gaps = 22/158 (13%)
Query: 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSR---NETELNQRIQEWKSKGL 62
R + G + LVTGGT GIG V LA GA +V T SR + + E + G+
Sbjct: 235 RPPVHG-SVLVTGGTGGIGGRVARRLAEQGAAHLVLT-SRRGADAPGAAELRAELEQLGV 292
Query: 63 QVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKET-TEFTEEDFSTVMTT 121
+V+ + CD R L+ + D L + ++AG + T +M
Sbjct: 293 RVTIAACDAADREALAALLAELPE--DAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRA 350
Query: 122 NFESAYHLSQLA--HPLLKSAGNGNIIFI--SSVAGVI 155
+A HL +L L A F+ SS A V
Sbjct: 351 KLTAARHLHELTADLDL--DA------FVLFSSGAAVW 380
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* Length = 486 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 4e-07
Identities = 38/160 (23%), Positives = 63/160 (39%), Gaps = 21/160 (13%)
Query: 5 REQRWSLKGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETE---LNQRIQEWKS 59
+ W G T LVTGGT G+G + LA GA ++ SR+ + + + E ++
Sbjct: 219 TDDEWKPTG-TVLVTGGTGGVGGQIARWLARRGAPHLLLV-SRSGPDADGAGELVAELEA 276
Query: 60 KGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVM 119
G + + + CD+ R +L+ + D L+ + + A T T E
Sbjct: 277 LGARTTVAACDVTDRESVRELLGGIGD--DVPLSAVFHAAATLDDGTVDTLTGERIERAS 334
Query: 120 TTNFESAYHLSQLA--HPLLKSAGNGNIIFI--SSVAGVI 155
A +L +L L +A F+ SS A
Sbjct: 335 RAKVLGARNLHELTRELDL--TA------FVLFSSFASAF 366
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} Length = 422 | Back alignment and structure |
|---|
Score = 46.3 bits (109), Expect = 5e-06
Identities = 40/296 (13%), Positives = 76/296 (25%), Gaps = 61/296 (20%)
Query: 15 TALVTGGTKGIGYAVVEELA----AFGAIVH---------TCSRNETELNQRIQEWKSKG 61
LV G + G G A A A V + + K+ G
Sbjct: 63 KVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAG 122
Query: 62 LQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNA---------------------- 99
L D A R +++E + ++ G++++++ +
Sbjct: 123 LYSKSINGDAFSDAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIG 182
Query: 100 ------------GTFIPKETTEFTEEDF-STVMTTNFESAYHLSQLAHPLLKSAGNGNII 146
T I + ++ T+ + A +
Sbjct: 183 QTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQDWELWIDALEGAGVLADGARSV 242
Query: 147 FISSVAGVIAIPMCSIY-----ASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLL 201
S + I P IY +KV +++ + L AK N + T
Sbjct: 243 AFSYIGTEITWP---IYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQAS 299
Query: 202 DTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGG 257
+ ++ ++ M G + L GQ VD
Sbjct: 300 AAIPVMPLYIS-----MVYKIMKEKGLHEGTIEQLDRLFRERLYRQDGQPAEVDEQ 350
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} Length = 511 | Back alignment and structure |
|---|
Score = 44.4 bits (105), Expect = 2e-05
Identities = 42/158 (26%), Positives = 56/158 (35%), Gaps = 26/158 (16%)
Query: 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSR---NETELNQRIQEWKSKGL 62
W G L+TGG IG + LAA GA +V T SR + +E + G
Sbjct: 255 SWQPSGT-VLITGGMGAIGRRLARRLAAEGAERLVLT-SRRGPEAPGAAELAEELRGHGC 312
Query: 63 QVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTN 122
+V + CD+ R L+ N + + AG + E F TV
Sbjct: 313 EVVHAACDVAERDALAALVTAYP------PNAVFHTAGILDDAVIDTLSPESFETVRGAK 366
Query: 123 FESAYHLSQL---AHPLLKSAGNGNIIFI--SSVAGVI 155
A L QL L A F+ SSV G
Sbjct: 367 VCGAELLHQLTADIKGL--DA------FVLFSSVTGTW 396
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 3e-05
Identities = 39/166 (23%), Positives = 70/166 (42%), Gaps = 15/166 (9%)
Query: 15 TALVTGGTKGIGYAVVEELAAF-GA--IVHTCSR---NETELNQRIQEWKSKGLQVSGSV 68
T LVTGGT +G V L G +V SR + + + + + G +VS
Sbjct: 532 TVLVTGGTGALGAEVARHLVIERGVRNLVLV-SRRGPAASGAAELVAQLTAYGAEVSLQA 590
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYH 128
CD+ R K++ ++ + L +++ AG + T E V+ + A +
Sbjct: 591 CDVADRETLAKVLASIPD--EHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARN 648
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLT 174
L +L P + ++ SSV+GV+ YA++ ++ L
Sbjct: 649 LLELIDPDV------ALVLFSSVSGVLGSGGQGNYAAANSFLDALA 688
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 | Back alignment and structure |
|---|
Score = 43.7 bits (103), Expect = 4e-05
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 10 SLKGMTALVTGGTKG-IGYAVVEELAAFGA-IVHTCSR---NETELNQRI-QEWKSKG 61
+ K L+TG KG IG V++ L GA +V T SR T+ Q I ++ +KG
Sbjct: 473 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKG 530
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 263 | |||
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 100.0 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 100.0 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 100.0 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 100.0 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 100.0 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 100.0 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 100.0 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 100.0 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 100.0 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 100.0 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 100.0 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 100.0 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 100.0 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 100.0 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 100.0 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 100.0 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 100.0 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 100.0 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 100.0 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 100.0 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 100.0 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 100.0 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 100.0 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 100.0 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 100.0 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 100.0 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 100.0 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 100.0 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 100.0 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 100.0 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 100.0 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 100.0 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 100.0 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 100.0 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 100.0 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 100.0 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 100.0 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 100.0 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 100.0 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 100.0 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 100.0 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 100.0 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 100.0 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 100.0 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 100.0 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 100.0 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 100.0 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 100.0 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 100.0 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 100.0 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 100.0 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 100.0 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 100.0 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 100.0 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 100.0 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 100.0 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 100.0 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 100.0 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 100.0 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 100.0 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 100.0 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 100.0 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 100.0 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 100.0 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 100.0 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 100.0 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 100.0 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 100.0 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 100.0 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 100.0 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 100.0 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 100.0 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 100.0 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 100.0 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 100.0 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 100.0 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 100.0 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 100.0 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 100.0 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 100.0 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 100.0 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 100.0 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 100.0 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 100.0 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 100.0 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 100.0 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 100.0 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 100.0 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 100.0 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 100.0 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 100.0 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 100.0 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 100.0 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 100.0 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 100.0 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 100.0 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 100.0 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 100.0 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 100.0 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 100.0 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 100.0 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 100.0 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 100.0 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 100.0 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 100.0 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 100.0 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 100.0 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 100.0 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 100.0 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 100.0 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 100.0 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 100.0 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 100.0 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 100.0 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 100.0 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 100.0 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 100.0 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 100.0 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 100.0 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 100.0 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 100.0 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 100.0 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 100.0 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 100.0 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 100.0 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 100.0 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 100.0 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 100.0 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 100.0 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 100.0 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 100.0 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 100.0 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 100.0 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 100.0 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 100.0 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 100.0 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 100.0 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 100.0 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 100.0 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 100.0 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 100.0 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 100.0 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 100.0 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 100.0 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 100.0 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 100.0 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 100.0 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 100.0 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 100.0 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 100.0 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 100.0 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 100.0 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 100.0 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 100.0 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 100.0 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 100.0 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 100.0 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 100.0 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 100.0 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 100.0 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 100.0 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 100.0 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 100.0 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 100.0 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 100.0 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 100.0 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 100.0 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 100.0 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 100.0 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 100.0 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 100.0 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 100.0 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 100.0 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 100.0 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 100.0 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 100.0 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 100.0 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 100.0 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 100.0 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 100.0 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 100.0 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 100.0 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 100.0 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 100.0 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 100.0 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 100.0 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 100.0 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 100.0 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 100.0 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 100.0 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 100.0 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 100.0 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 100.0 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 100.0 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 100.0 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 100.0 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 100.0 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 100.0 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 100.0 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 100.0 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 100.0 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 100.0 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 100.0 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 100.0 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 100.0 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 100.0 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 100.0 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 100.0 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 100.0 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 100.0 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 99.98 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.97 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.97 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.97 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.96 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.96 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.96 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.96 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.95 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.95 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.95 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.95 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.95 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.95 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.95 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.95 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.94 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.94 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.94 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.94 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.94 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.94 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.94 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.94 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.93 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.93 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.93 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.93 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.93 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.93 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.93 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.93 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.93 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.93 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.93 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.93 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.93 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.93 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.93 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.93 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.92 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.92 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.92 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.92 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.92 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.92 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 99.92 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.92 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.92 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.92 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.91 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.91 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 99.91 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.91 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.91 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.91 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.91 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.91 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.9 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.9 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.9 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.9 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.89 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.89 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.89 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.89 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.89 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.89 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.89 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.89 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.88 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.88 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.88 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.87 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.87 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.87 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.87 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.87 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.87 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.86 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.85 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.85 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.81 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.81 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.81 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.8 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.79 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.78 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.78 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.78 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.76 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.75 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.74 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.72 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.69 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.62 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 99.43 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.36 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 99.25 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 98.99 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 98.95 | |
| 3ond_A | 488 | Adenosylhomocysteinase; plant protein, enzyme-subs | 98.88 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 98.87 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 98.83 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 98.77 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 98.68 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 98.66 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 98.66 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 98.65 | |
| 2o7s_A | 523 | DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat | 98.64 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 98.6 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 98.58 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 98.57 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 98.57 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 98.47 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 98.46 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 98.44 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 98.39 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 98.38 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 98.35 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 98.33 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 98.33 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 98.33 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 98.32 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 98.32 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 98.32 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 98.31 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 98.31 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 98.31 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 98.3 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 98.26 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 98.23 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 98.22 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 98.21 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 98.19 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 98.11 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 98.11 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 98.06 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 98.06 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 98.06 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 98.05 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 98.05 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 98.04 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 98.03 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 98.02 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 98.01 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 98.0 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 97.99 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 97.95 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 97.87 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 97.87 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 97.86 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 97.85 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 97.82 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 97.8 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 97.73 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 97.72 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 97.71 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 97.69 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 97.69 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 97.68 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 97.68 | |
| 1vj0_A | 380 | Alcohol dehydrogenase, zinc-containing; TM0436, st | 97.64 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 97.62 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 97.59 | |
| 1p9o_A | 313 | Phosphopantothenoylcysteine synthetase; ligase; 2. | 97.58 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 97.58 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 97.57 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 97.56 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 97.55 | |
| 1gu7_A | 364 | Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s | 97.53 | |
| 2fzw_A | 373 | Alcohol dehydrogenase class III CHI chain; S-nitro | 97.47 | |
| 1cdo_A | 374 | Alcohol dehydrogenase; oxidoreductase, oxidoreduct | 97.46 | |
| 2h6e_A | 344 | ADH-4, D-arabinose 1-dehydrogenase; rossman fold, | 97.44 | |
| 1pl8_A | 356 | Human sorbitol dehydrogenase; NAD, oxidoreductase; | 97.42 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 97.42 | |
| 4ej6_A | 370 | Putative zinc-binding dehydrogenase; structural ge | 97.41 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 97.4 | |
| 1e3i_A | 376 | Alcohol dehydrogenase, class II; HET: NAD; 2.08A { | 97.4 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 97.39 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 97.38 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 97.38 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 97.37 | |
| 2jhf_A | 374 | Alcohol dehydrogenase E chain; oxidoreductase, met | 97.36 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 97.35 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 97.33 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 97.32 | |
| 1p0f_A | 373 | NADP-dependent alcohol dehydrogenase; ADH topology | 97.32 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 97.31 | |
| 4dvj_A | 363 | Putative zinc-dependent alcohol dehydrogenase Pro; | 97.28 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 97.27 | |
| 3fpc_A | 352 | NADP-dependent alcohol dehydrogenase; oxydoreducta | 97.25 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 97.23 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 97.23 | |
| 3tl2_A | 315 | Malate dehydrogenase; center for structural genomi | 97.22 | |
| 3tum_A | 269 | Shikimate dehydrogenase family protein; rossmann-f | 97.21 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 97.18 | |
| 3jv7_A | 345 | ADH-A; dehydrogenase, nucleotide binding, rossmann | 97.18 | |
| 3nx4_A | 324 | Putative oxidoreductase; csgid, structural genomic | 97.17 | |
| 1h2b_A | 359 | Alcohol dehydrogenase; oxidoreductase, archaea, hy | 97.14 | |
| 3fbt_A | 282 | Chorismate mutase and shikimate 5-dehydrogenase fu | 97.14 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 97.1 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 97.06 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 97.06 | |
| 3iup_A | 379 | Putative NADPH:quinone oxidoreductase; YP_296108.1 | 97.04 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 97.04 | |
| 3p2o_A | 285 | Bifunctional protein fold; structural genomics, ce | 97.02 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 97.0 | |
| 4aj2_A | 331 | L-lactate dehydrogenase A chain; oxidoreductase-in | 96.98 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 96.98 | |
| 3uko_A | 378 | Alcohol dehydrogenase class-3; alcohol dehydrogena | 96.96 | |
| 1zsy_A | 357 | Mitochondrial 2-enoyl thioester reductase; medium- | 96.94 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 96.94 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 96.94 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 96.94 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 96.89 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 96.87 | |
| 1f8f_A | 371 | Benzyl alcohol dehydrogenase; rossmann fold, oxido | 96.87 | |
| 4h7p_A | 345 | Malate dehydrogenase; ssgcid, structural G seattle | 96.86 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 96.85 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 96.82 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 96.82 | |
| 2dph_A | 398 | Formaldehyde dismutase; dismutation of aldehydes, | 96.8 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 96.8 | |
| 1leh_A | 364 | Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi | 96.78 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 96.78 | |
| 4f3y_A | 272 | DHPR, dihydrodipicolinate reductase; structural ge | 96.77 | |
| 1kol_A | 398 | Formaldehyde dehydrogenase; oxidoreductase; HET: N | 96.76 | |
| 3l07_A | 285 | Bifunctional protein fold; structural genomics, ID | 96.75 | |
| 3ldh_A | 330 | Lactate dehydrogenase; oxidoreductase, CHOH donor, | 96.64 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 96.64 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 96.59 | |
| 3rui_A | 340 | Ubiquitin-like modifier-activating enzyme ATG7; au | 96.58 | |
| 1oju_A | 294 | MDH, malate dehydrogenase; hyperthermophilic, oxid | 96.56 | |
| 3lk7_A | 451 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; a | 96.52 | |
| 1y6j_A | 318 | L-lactate dehydrogenase; southeast collaboratory f | 96.51 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 96.49 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 96.44 | |
| 3hhp_A | 312 | Malate dehydrogenase; MDH, citric acid cycle, TCA | 96.43 | |
| 4a2c_A | 346 | Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc | 96.41 | |
| 4a5o_A | 286 | Bifunctional protein fold; oxidoreductase, hydrola | 96.4 | |
| 3d0o_A | 317 | L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly | 96.39 | |
| 3tri_A | 280 | Pyrroline-5-carboxylate reductase; amino acid bios | 96.39 | |
| 2x0j_A | 294 | Malate dehydrogenase; oxidoreductase, hyperthermop | 96.37 | |
| 2zqz_A | 326 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ro | 96.35 | |
| 2hk9_A | 275 | Shikimate dehydrogenase; shikimate pathway, drug d | 96.34 | |
| 3nep_X | 314 | Malate dehydrogenase; halophIle, molecular adpatat | 96.32 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 96.32 | |
| 4eez_A | 348 | Alcohol dehydrogenase 1; site-saturation mutagenes | 96.3 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 96.29 | |
| 4a26_A | 300 | Putative C-1-tetrahydrofolate synthase, cytoplasm; | 96.29 | |
| 1tt7_A | 330 | YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st | 96.28 | |
| 2v6b_A | 304 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ra | 96.27 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 96.26 | |
| 3ngx_A | 276 | Bifunctional protein fold; methylenetetrahydrofola | 96.25 | |
| 1ez4_A | 318 | Lactate dehydrogenase; rossmann fold, oxidoreducta | 96.25 | |
| 3h5n_A | 353 | MCCB protein; ubiquitin-activating enzyme, microci | 96.25 | |
| 2d5c_A | 263 | AROE, shikimate 5-dehydrogenase; substrate, dimer, | 96.23 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 96.23 | |
| 1b0a_A | 288 | Protein (fold bifunctional protein); folate, dehyd | 96.23 | |
| 4gsl_A | 615 | Ubiquitin-like modifier-activating enzyme ATG7; ub | 96.17 | |
| 1a4i_A | 301 | Methylenetetrahydrofolate dehydrogenase / methenyl | 96.16 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 96.16 | |
| 3d1l_A | 266 | Putative NADP oxidoreductase BF3122; structural ge | 96.14 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 96.11 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 96.1 | |
| 2c2x_A | 281 | Methylenetetrahydrofolate dehydrogenase- methenylt | 96.07 | |
| 1f0y_A | 302 | HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive | 96.04 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 95.97 | |
| 1guz_A | 310 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 95.95 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 95.93 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 95.92 | |
| 3njr_A | 204 | Precorrin-6Y methylase; methyltransferase, decarbo | 95.82 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 95.82 | |
| 2raf_A | 209 | Putative dinucleotide-binding oxidoreductase; NP_7 | 95.81 | |
| 7mdh_A | 375 | Protein (malate dehydrogenase); chloroplastic mala | 95.8 | |
| 2xxj_A | 310 | L-LDH, L-lactate dehydrogenase; oxidoreductase, hy | 95.79 | |
| 3k96_A | 356 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA | 95.78 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 95.76 | |
| 2gb4_A | 252 | Thiopurine S-methyltransferase; 18204406, thiopuri | 95.74 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 95.71 |
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-63 Score=408.19 Aligned_cols=249 Identities=33% Similarity=0.462 Sum_probs=234.4
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
-+||+||+++||||++|||+++|++|+++|++|++++|+++.+++..+++.+.+.++.++++|++++++++++++++.++
T Consensus 4 ~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (255)
T 4g81_D 4 LFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAE 83 (255)
T ss_dssp TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 36999999999999999999999999999999999999999999999999988889999999999999999999999999
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhh-CCCceEEEEccccccccCCCCcchhhH
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKS-AGNGNIIFISSVAGVIAIPMCSIYASS 166 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~iv~vsS~~~~~~~~~~~~Y~~s 166 (263)
| |++|+||||||+....++.+.+.|+|++.+++|+.|+++++|+++|+|.+ +++|+||++||..+..+.|+..+|++|
T Consensus 84 ~-G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~as 162 (255)
T 4g81_D 84 G-IHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAA 162 (255)
T ss_dssp T-CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHHHH
T ss_pred C-CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHHHH
Confidence 9 89999999999999999999999999999999999999999999999975 467999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
|+|+.+|+|++|.|++++|||||+|+||+|+|++......++... .......|++|+++|+||+++++||+|+.++|
T Consensus 163 Kaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~---~~~~~~~Pl~R~g~pediA~~v~fL~S~~a~~ 239 (255)
T 4g81_D 163 KGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFD---SWVKSSTPSQRWGRPEELIGTAIFLSSKASDY 239 (255)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHH---HHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHH---HHHHhCCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence 999999999999999999999999999999999987765544333 55667889999999999999999999999999
Q ss_pred ccCcEEEeCCCccc
Q 024752 247 VTGQVICVDGGYSV 260 (263)
Q Consensus 247 ~~G~~i~~dgG~~~ 260 (263)
+|||.|.+|||+..
T Consensus 240 iTG~~i~VDGG~~A 253 (255)
T 4g81_D 240 INGQIIYVDGGWLA 253 (255)
T ss_dssp CCSCEEEESTTGGG
T ss_pred CcCCEEEECCCeEe
Confidence 99999999999863
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-62 Score=406.15 Aligned_cols=250 Identities=28% Similarity=0.411 Sum_probs=230.9
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
+||+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++++.+.++.++++|++++++++++++++.++|
T Consensus 3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 58999999999999999999999999999999999999999999999999889999999999999999999999999999
Q ss_pred CCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 89 DGKLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 89 ~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
|++|+||||||+... .++.+.+.|+|++.|++|+.|+++++|+++|+|++++.|+||++||..+..+.++..+|++||
T Consensus 83 -G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~asK 161 (254)
T 4fn4_A 83 -SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAK 161 (254)
T ss_dssp -SCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHHHHH
T ss_pred -CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHHHHH
Confidence 899999999998754 678899999999999999999999999999999999899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
+|+.+|+|++|.|++++|||||+|+||+|+|++.......+... .........|++|++.|+|||++++||+|+.++|+
T Consensus 162 aal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~-~~~~~~~~~~~~R~g~pediA~~v~fLaSd~a~~i 240 (254)
T 4fn4_A 162 HGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELG-MRTLTKLMSLSSRLAEPEDIANVIVFLASDEASFV 240 (254)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHH-HHHHHHHHTTCCCCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHH-HHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcCC
Confidence 99999999999999999999999999999999976554433221 11223335688999999999999999999999999
Q ss_pred cCcEEEeCCCccc
Q 024752 248 TGQVICVDGGYSV 260 (263)
Q Consensus 248 ~G~~i~~dgG~~~ 260 (263)
|||.|.+|||+++
T Consensus 241 TG~~i~VDGG~t~ 253 (254)
T 4fn4_A 241 NGDAVVVDGGLTV 253 (254)
T ss_dssp CSCEEEESTTGGG
T ss_pred cCCEEEeCCCccc
Confidence 9999999999986
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-61 Score=394.42 Aligned_cols=244 Identities=30% Similarity=0.433 Sum_probs=222.5
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
+++++|+||++|||||++|||+++|++|+++|++|++.+|+.. ++..+++.+.+.++.++.+|++|+++++++++
T Consensus 2 ~n~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~--- 76 (247)
T 4hp8_A 2 KNPFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDGGNASALLIDFADPLAAKDSFT--- 76 (247)
T ss_dssp -CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTTCCEEEEECCTTSTTTTTTSST---
T ss_pred cCCcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhCCcEEEEEccCCCHHHHHHHHH---
Confidence 4578999999999999999999999999999999999999865 46677777888899999999999998877653
Q ss_pred hhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccccccCCCCcchh
Q 024752 86 SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVIAIPMCSIYA 164 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~ 164 (263)
+ +++|+||||||+....++.+.+.++|++.+++|+.|+|+++|+++|+|.+++ .|+||++||..+..+.++..+|+
T Consensus 77 --~-g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~ 153 (247)
T 4hp8_A 77 --D-AGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYT 153 (247)
T ss_dssp --T-TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHH
T ss_pred --h-CCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHH
Confidence 3 7899999999999989999999999999999999999999999999998764 79999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCC
Q 024752 165 SSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244 (263)
Q Consensus 165 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~ 244 (263)
+||+|+.+|+|++|.|++++|||||+|+||+|+||+......++... ..+....|++|++.|+||+++++||+|+.+
T Consensus 154 asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~---~~~~~~~PlgR~g~peeiA~~v~fLaSd~a 230 (247)
T 4hp8_A 154 AAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARN---KAILERIPAGRWGHSEDIAGAAVFLSSAAA 230 (247)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHH---HHHHTTCTTSSCBCTHHHHHHHHHHTSGGG
T ss_pred HHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHH---HHHHhCCCCCCCcCHHHHHHHHHHHhCchh
Confidence 99999999999999999999999999999999999987665443322 456678899999999999999999999999
Q ss_pred CCccCcEEEeCCCccc
Q 024752 245 SYVTGQVICVDGGYSV 260 (263)
Q Consensus 245 ~~~~G~~i~~dgG~~~ 260 (263)
+|+|||.|.+|||++.
T Consensus 231 ~~iTG~~i~VDGG~~A 246 (247)
T 4hp8_A 231 DYVHGAILNVDGGWLA 246 (247)
T ss_dssp TTCCSCEEEESTTGGG
T ss_pred cCCcCCeEEECccccc
Confidence 9999999999999975
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-59 Score=391.52 Aligned_cols=244 Identities=30% Similarity=0.421 Sum_probs=219.9
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++ +.++.++++|++++++++++++++.++| |
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G 102 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---GGGAVGIQADSANLAELDRLYEKVKAEA-G 102 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCCeEEEEecCCCHHHHHHHHHHHHHHc-C
Confidence 89999999999999999999999999999999999999988887776 5678899999999999999999999999 8
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHH
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAM 170 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~ 170 (263)
+||+||||||+....++.+.+.|+|++.|++|+.|+++++|+++|+|++ +|+||+++|..+..+.|+..+|++||+|+
T Consensus 103 ~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~--~G~IInisS~~~~~~~~~~~~Y~asKaav 180 (273)
T 4fgs_A 103 RIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR--GSSVVLTGSTAGSTGTPAFSVYAASKAAL 180 (273)
T ss_dssp CEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGGSCCTTCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCeEEEEeehhhccCCCCchHHHHHHHHH
Confidence 9999999999998899999999999999999999999999999999976 58999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchh--HHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCcc
Q 024752 171 NQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNF--LEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248 (263)
Q Consensus 171 ~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~ 248 (263)
.+|+|+++.|++++|||||+|+||+|+|++.......... ......+....|++|++.|+|||++++||+|+.++|+|
T Consensus 181 ~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~FLaSd~a~~iT 260 (273)
T 4fgs_A 181 RSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLASDDSSFVT 260 (273)
T ss_dssp HHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCcc
Confidence 9999999999999999999999999999998765443322 12235566789999999999999999999999999999
Q ss_pred CcEEEeCCCccc
Q 024752 249 GQVICVDGGYSV 260 (263)
Q Consensus 249 G~~i~~dgG~~~ 260 (263)
||.|.+|||++.
T Consensus 261 G~~i~VDGG~s~ 272 (273)
T 4fgs_A 261 GAELFVDGGSAQ 272 (273)
T ss_dssp SCEEEESTTTTT
T ss_pred CCeEeECcChhh
Confidence 999999999875
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-59 Score=384.97 Aligned_cols=248 Identities=27% Similarity=0.338 Sum_probs=218.6
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
.|+|+||++|||||++|||+++|++|+++|++|++++|+.+..+ ..+++.+.+.++.++++|++++++++++++++.++
T Consensus 2 ~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~ 80 (258)
T 4gkb_A 2 DLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQRQPRATYLPVELQDDAQCRDAVAQTIAT 80 (258)
T ss_dssp CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999988754 45566667788999999999999999999999999
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
| |++|+||||||+....+ .+.+.|+|++.+++|+.++++++|+++|+|+++ +|+||++||..+..+.|+..+|++||
T Consensus 81 ~-G~iDiLVNnAGi~~~~~-~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~~~~~~Y~asK 157 (258)
T 4gkb_A 81 F-GRLDGLVNNAGVNDGIG-LDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT-RGAIVNISSKTAVTGQGNTSGYCASK 157 (258)
T ss_dssp H-SCCCEEEECCCCCCCCC-TTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCTHHHHCCSSCHHHHHHH
T ss_pred h-CCCCEEEECCCCCCCCC-ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEeehhhccCCCCchHHHHHH
Confidence 9 89999999999865444 478999999999999999999999999999765 59999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccch-hHHHHHHhHhcCCCC-CCCChhhHHHHHHHHcCCCCC
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSN-FLEHANRMVLRTPML-RPGEPNEVSSVVAFLCLSATS 245 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~va~~~~~l~s~~~~ 245 (263)
+|+.+|+|+++.|++++|||||+|+||+|+|++......... ..+...+.....|++ |++.|+|||++++||+|+.++
T Consensus 158 aav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~v~fLaS~~a~ 237 (258)
T 4gkb_A 158 GAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLLSPRAS 237 (258)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhc
Confidence 999999999999999999999999999999999876543221 122235566678885 899999999999999999999
Q ss_pred CccCcEEEeCCCcc
Q 024752 246 YVTGQVICVDGGYS 259 (263)
Q Consensus 246 ~~~G~~i~~dgG~~ 259 (263)
|+|||.|.+|||++
T Consensus 238 ~iTG~~i~VDGG~T 251 (258)
T 4gkb_A 238 HTTGEWLFVDGGYT 251 (258)
T ss_dssp TCCSCEEEESTTTT
T ss_pred CccCCeEEECCCcc
Confidence 99999999999996
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-58 Score=374.14 Aligned_cols=233 Identities=37% Similarity=0.570 Sum_probs=206.7
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
++||++|||||++|||+++|++|+++|++|++++|+++.+++ ..+.++..+.+|++++++++++++ ++ +
T Consensus 9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~------~~~~~~~~~~~Dv~~~~~v~~~~~----~~-g 77 (242)
T 4b79_A 9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA------PRHPRIRREELDITDSQRLQRLFE----AL-P 77 (242)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS------CCCTTEEEEECCTTCHHHHHHHHH----HC-S
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh------hhcCCeEEEEecCCCHHHHHHHHH----hc-C
Confidence 589999999999999999999999999999999999876543 234578999999999999888775 45 8
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHH
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAM 170 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~ 170 (263)
++|+||||||+.. +..+.+.++|++.+++|+.|+++++|+++|+|+++ +|+||++||..+..+.++..+|++||+|+
T Consensus 78 ~iDiLVNNAGi~~--~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~~~~~~Y~asKaav 154 (242)
T 4b79_A 78 RLDVLVNNAGISR--DREEYDLATFERVLRLNLSAAMLASQLARPLLAQR-GGSILNIASMYSTFGSADRPAYSASKGAI 154 (242)
T ss_dssp CCSEEEECCCCCC--GGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-CEEEEEECCGGGTSCCSSCHHHHHHHHHH
T ss_pred CCCEEEECCCCCC--CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEeeccccCCCCCCHHHHHHHHHH
Confidence 9999999999864 56688999999999999999999999999999875 59999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCc
Q 024752 171 NQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQ 250 (263)
Q Consensus 171 ~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~ 250 (263)
.+|+|+++.|++++|||||+|+||+|+|||......++.. ..++....|++|+++|+||+++++||+|+.++|+|||
T Consensus 155 ~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~---~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~iTG~ 231 (242)
T 4b79_A 155 VQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEA---TRRIMQRTPLARWGEAPEVASAAAFLCGPGASFVTGA 231 (242)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHH---HHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSC
T ss_pred HHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHH---HHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCc
Confidence 9999999999999999999999999999998776554433 3566678999999999999999999999999999999
Q ss_pred EEEeCCCccc
Q 024752 251 VICVDGGYSV 260 (263)
Q Consensus 251 ~i~~dgG~~~ 260 (263)
.|.+|||+..
T Consensus 232 ~l~VDGG~la 241 (242)
T 4b79_A 232 VLAVDGGYLC 241 (242)
T ss_dssp EEEESTTGGG
T ss_pred eEEECccHhh
Confidence 9999999864
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-56 Score=368.06 Aligned_cols=232 Identities=25% Similarity=0.345 Sum_probs=211.4
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
+|+||||||++|||+++|++|+++|++|++++|+++.++++. +.+.++.++++|++++++++++++++.++| +++
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~----~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~-g~i 76 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFA----KERPNLFYFHGDVADPLTLKKFVEYAMEKL-QRI 76 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----TTCTTEEEEECCTTSHHHHHHHHHHHHHHH-SCC
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HhcCCEEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence 499999999999999999999999999999999987766554 345678999999999999999999999999 899
Q ss_pred cEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHHH
Q 024752 93 NILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQ 172 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~ 172 (263)
|+||||||+....++.+.+.|+|++.+++|+.++++++|+++|+|+++ +|+||++||..+..+.|+..+|++||+|+.+
T Consensus 77 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~-~G~IInisS~~~~~~~~~~~~Y~asKaal~~ 155 (247)
T 3ged_A 77 DVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN-KGRIINIASTRAFQSEPDSEAYASAKGGIVA 155 (247)
T ss_dssp CEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCcEEEEeecccccCCCCCHHHHHHHHHHHH
Confidence 999999999988999999999999999999999999999999999876 4999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCcEE
Q 024752 173 LTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVI 252 (263)
Q Consensus 173 ~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i 252 (263)
|+|++|.|+++ |||||+|+||+|+|++..... .+.....|++|+++|+|||++++||+|+ +|+|||.|
T Consensus 156 ltk~lA~ela~-~IrVN~I~PG~i~t~~~~~~~---------~~~~~~~Pl~R~g~pediA~~v~fL~s~--~~iTG~~i 223 (247)
T 3ged_A 156 LTHALAMSLGP-DVLVNCIAPGWINVTEQQEFT---------QEDCAAIPAGKVGTPKDISNMVLFLCQQ--DFITGETI 223 (247)
T ss_dssp HHHHHHHHHTT-TSEEEEEEECSBCCCC---CC---------HHHHHTSTTSSCBCHHHHHHHHHHHHHC--SSCCSCEE
T ss_pred HHHHHHHHHCC-CCEEEEEecCcCCCCCcHHHH---------HHHHhcCCCCCCcCHHHHHHHHHHHHhC--CCCCCCeE
Confidence 99999999998 999999999999999865432 3344568999999999999999999984 69999999
Q ss_pred EeCCCccccC
Q 024752 253 CVDGGYSVTG 262 (263)
Q Consensus 253 ~~dgG~~~~~ 262 (263)
.+|||++.+.
T Consensus 224 ~VDGG~s~r~ 233 (247)
T 3ged_A 224 IVDGGMSKRM 233 (247)
T ss_dssp EESTTGGGCC
T ss_pred EECcCHHHhC
Confidence 9999998764
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-56 Score=371.51 Aligned_cols=246 Identities=21% Similarity=0.237 Sum_probs=224.5
Q ss_pred CCCCCCEEEEecCCC--chHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcC-CceEEEeccCCCHHHHHHHHHHHH
Q 024752 9 WSLKGMTALVTGGTK--GIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG-LQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 9 ~~~~~k~vlVtGas~--giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
++|+||++|||||+| |||+++|++|+++|++|++++|+++.++++.+++++.+ .++.++++|++++++++++++++.
T Consensus 2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (256)
T 4fs3_A 2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIG 81 (256)
T ss_dssp CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 689999999999875 99999999999999999999999999999988887654 478999999999999999999999
Q ss_pred hhcCCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCc
Q 024752 86 SQFDGKLNILINNAGTFIP----KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCS 161 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~ 161 (263)
++| +++|++|||||+... .++.+.+.++|+..+++|+.+++.+++.+.++|++ +|+||++||..+..+.|+..
T Consensus 82 ~~~-G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--~G~IVnisS~~~~~~~~~~~ 158 (256)
T 4fs3_A 82 KDV-GNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE--GGSIVATTYLGGEFAVQNYN 158 (256)
T ss_dssp HHH-CCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTT--CEEEEEEECGGGTSCCTTTH
T ss_pred HHh-CCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCEEEEEeccccccCcccch
Confidence 999 899999999998754 34567889999999999999999999999988765 69999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcC
Q 024752 162 IYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCL 241 (263)
Q Consensus 162 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s 241 (263)
.|++||+|+.+|+|+++.|++++|||||+|+||+++|++.......+.. ...+....|++|+++|+||+++++||+|
T Consensus 159 ~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~---~~~~~~~~Pl~R~g~peevA~~v~fL~S 235 (256)
T 4fs3_A 159 VMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTI---LKEIKERAPLKRNVDQVEVGKTAAYLLS 235 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHH---HHHHHHHSTTSSCCCHHHHHHHHHHHHS
T ss_pred hhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHH---HHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999998765443333 3556678899999999999999999999
Q ss_pred CCCCCccCcEEEeCCCccc
Q 024752 242 SATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 242 ~~~~~~~G~~i~~dgG~~~ 260 (263)
+.++|+|||.|.+|||++.
T Consensus 236 d~a~~iTG~~i~VDGG~~a 254 (256)
T 4fs3_A 236 DLSSGVTGENIHVDSGFHA 254 (256)
T ss_dssp GGGTTCCSCEEEESTTGGG
T ss_pred chhcCccCCEEEECcCHHh
Confidence 9999999999999999975
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-57 Score=373.26 Aligned_cols=245 Identities=24% Similarity=0.354 Sum_probs=215.7
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
-.-|+|+||++|||||++|||+++|++|+++|++|++++|+.+. ......++++|++++++++++++++.
T Consensus 4 ~dl~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~----------~~~~~~~~~~Dv~~~~~v~~~~~~~~ 73 (261)
T 4h15_A 4 IEFLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPE----------GLPEELFVEADLTTKEGCAIVAEATR 73 (261)
T ss_dssp CCCCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCT----------TSCTTTEEECCTTSHHHHHHHHHHHH
T ss_pred hhccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchh----------CCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 34478999999999999999999999999999999999998652 11234578999999999999999999
Q ss_pred hhcCCCccEEEeCCCCCCC--CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCC-CCcc
Q 024752 86 SQFDGKLNILINNAGTFIP--KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIP-MCSI 162 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-~~~~ 162 (263)
++| |++|+||||||+... .++.+.+.|+|++.|++|+.++++++|+++|+|++++.|+||++||..+..+.| +...
T Consensus 74 ~~~-G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~~ 152 (261)
T 4h15_A 74 QRL-GGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPESTTA 152 (261)
T ss_dssp HHT-SSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTCHH
T ss_pred HHc-CCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCccHH
Confidence 999 899999999998654 478899999999999999999999999999999999899999999999998876 5788
Q ss_pred hhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccccc---------chhHHHHHHhHhcCCCCCCCChhhHH
Q 024752 163 YASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKD---------SNFLEHANRMVLRTPMLRPGEPNEVS 233 (263)
Q Consensus 163 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~va 233 (263)
|++||+|+.+|+|+++.|++++|||||+|+||+|+|++....... +...+.........|++|+++|+|||
T Consensus 153 Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peevA 232 (261)
T 4h15_A 153 YAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEVA 232 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHHHHH
Confidence 999999999999999999999999999999999999987554221 11222234445678999999999999
Q ss_pred HHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 234 SVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 234 ~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
++++||+|+.++|+|||.|.+|||+..+
T Consensus 233 ~~v~fLaS~~a~~itG~~i~VDGG~v~T 260 (261)
T 4h15_A 233 NLIAFLASDRAASITGAEYTIDGGTVPT 260 (261)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTCSCC
T ss_pred HHHHHHhCchhcCccCcEEEECCcCccc
Confidence 9999999999999999999999998543
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-53 Score=355.04 Aligned_cols=253 Identities=26% Similarity=0.376 Sum_probs=227.6
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHh-cCC-ceEEEeccCCCHHHHHHHHHHHH
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS-KGL-QVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~-~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
++++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.. .+. ++.++.+|++++++++++++++.
T Consensus 3 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 82 (265)
T 3lf2_A 3 PYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACE 82 (265)
T ss_dssp CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999888876 333 58999999999999999999999
Q ss_pred hhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhh
Q 024752 86 SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYAS 165 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~ 165 (263)
+.+ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..+.++...|++
T Consensus 83 ~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a 161 (265)
T 3lf2_A 83 RTL-GCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSA 161 (265)
T ss_dssp HHH-CSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHHHH
T ss_pred HHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhhHH
Confidence 998 8999999999998888889999999999999999999999999999999988899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccc-----hhHHHHHHhHh--cCCCCCCCChhhHHHHHHH
Q 024752 166 SKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDS-----NFLEHANRMVL--RTPMLRPGEPNEVSSVVAF 238 (263)
Q Consensus 166 sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-----~~~~~~~~~~~--~~~~~~~~~~~~va~~~~~ 238 (263)
||+++++|+++++.|++++||+||+|+||+|+|++........ ........... ..|++++.+|+|++++++|
T Consensus 162 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~f 241 (265)
T 3lf2_A 162 ARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAILF 241 (265)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHHHHHHHHHH
Confidence 9999999999999999999999999999999999876543211 11111122222 2899999999999999999
Q ss_pred HcCCCCCCccCcEEEeCCCcccc
Q 024752 239 LCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 239 l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
|+++.++++|||.|.+|||++.+
T Consensus 242 L~s~~~~~itG~~i~vdGG~~~~ 264 (265)
T 3lf2_A 242 LASPLSAYTTGSHIDVSGGLSRH 264 (265)
T ss_dssp HHSGGGTTCCSEEEEESSSCCCC
T ss_pred HhCchhcCcCCCEEEECCCCcCC
Confidence 99999999999999999999764
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-53 Score=353.63 Aligned_cols=250 Identities=35% Similarity=0.499 Sum_probs=230.7
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
...+++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++.+|++|+++++++++++.
T Consensus 5 ~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 84 (256)
T 3gaf_A 5 ESPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAAL 84 (256)
T ss_dssp -CTTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 34678999999999999999999999999999999999999999999999998888889999999999999999999999
Q ss_pred hhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhh
Q 024752 86 SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYAS 165 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~ 165 (263)
+++ +++|+||||||+....++ +.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|++
T Consensus 85 ~~~-g~id~lv~nAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a 162 (256)
T 3gaf_A 85 DQF-GKITVLVNNAGGGGPKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGS 162 (256)
T ss_dssp HHH-SCCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHHHHH
T ss_pred HHc-CCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchHHHH
Confidence 998 899999999999887777 889999999999999999999999999999988899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCC
Q 024752 166 SKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245 (263)
Q Consensus 166 sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~ 245 (263)
||+++++|+++++.|++++||+||+|+||+++|++....... +....+....|++++.+|+|++++++||+++.++
T Consensus 163 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~----~~~~~~~~~~p~~r~~~~~dva~~~~~L~s~~~~ 238 (256)
T 3gaf_A 163 SKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTP----EIERAMLKHTPLGRLGEAQDIANAALFLCSPAAA 238 (256)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCH----HHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCH----HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCccc
Confidence 999999999999999999999999999999999987654321 1224455678999999999999999999999999
Q ss_pred CccCcEEEeCCCcccc
Q 024752 246 YVTGQVICVDGGYSVT 261 (263)
Q Consensus 246 ~~~G~~i~~dgG~~~~ 261 (263)
++|||.|++|||+..+
T Consensus 239 ~itG~~i~vdgG~~~~ 254 (256)
T 3gaf_A 239 WISGQVLTVSGGGVQE 254 (256)
T ss_dssp TCCSCEEEESTTSCCC
T ss_pred CccCCEEEECCCcccc
Confidence 9999999999998754
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-53 Score=357.29 Aligned_cols=250 Identities=30% Similarity=0.469 Sum_probs=232.6
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
.++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+.++.++.+|++++++++++++++.++
T Consensus 21 ~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 100 (271)
T 4ibo_A 21 IFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQ 100 (271)
T ss_dssp GGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999888888999999999999999999999999
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|++||
T Consensus 101 ~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK 179 (271)
T 4ibo_A 101 G-IDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAK 179 (271)
T ss_dssp T-CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHH
T ss_pred C-CCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhHHHHH
Confidence 8 899999999999888888899999999999999999999999999999998889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
++++.|+++++.|++++||+||+|+||+|+|++.......+.. ..++....|++++++|+|++++++||+++.++++
T Consensus 180 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~---~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~i 256 (271)
T 4ibo_A 180 GGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEF---DAWVKARTPAKRWGKPQELVGTAVFLSASASDYV 256 (271)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHH---HHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHH---HHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCC
Confidence 9999999999999999999999999999999997665433222 2455667899999999999999999999999999
Q ss_pred cCcEEEeCCCcccc
Q 024752 248 TGQVICVDGGYSVT 261 (263)
Q Consensus 248 ~G~~i~~dgG~~~~ 261 (263)
|||.|++|||+..+
T Consensus 257 tG~~i~vdGG~~~~ 270 (271)
T 4ibo_A 257 NGQIIYVDGGMLSV 270 (271)
T ss_dssp CSCEEEESTTGGGB
T ss_pred CCcEEEECCCeecc
Confidence 99999999998764
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-53 Score=350.35 Aligned_cols=248 Identities=27% Similarity=0.357 Sum_probs=229.1
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEe-eCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTC-SRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
.++|++|||||++|||++++++|+++|++|+++ +|+.+.+++..+++...+.++.++.+|++++++++++++++.+++
T Consensus 2 ~~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~- 80 (258)
T 3oid_A 2 EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETF- 80 (258)
T ss_dssp -CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence 368999999999999999999999999999886 999999999999998888889999999999999999999999998
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
+++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|++||++
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa 160 (258)
T 3oid_A 81 GRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAA 160 (258)
T ss_dssp SCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHHHHH
Confidence 89999999999988888889999999999999999999999999999999888999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccC
Q 024752 170 MNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTG 249 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G 249 (263)
++.|+++++.|++++||+||+|+||+++|++.......+.. ........|.+++.+|+|++++++||+++.++++||
T Consensus 161 ~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~---~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~itG 237 (258)
T 3oid_A 161 LEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDL---LEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRG 237 (258)
T ss_dssp HHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHH---HHHHHHHCTTSSCBCHHHHHHHHHHHTSSTTTTCCS
T ss_pred HHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHH---HHHHHhcCCCCCCcCHHHHHHHHHHHhCcccCCccC
Confidence 99999999999999999999999999999998765433222 245556789999999999999999999999999999
Q ss_pred cEEEeCCCccccC
Q 024752 250 QVICVDGGYSVTG 262 (263)
Q Consensus 250 ~~i~~dgG~~~~~ 262 (263)
|.|++|||++...
T Consensus 238 ~~i~vdGG~~~~~ 250 (258)
T 3oid_A 238 QTIIVDGGRSLLV 250 (258)
T ss_dssp CEEEESTTGGGBC
T ss_pred CEEEECCCccCCC
Confidence 9999999998753
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-53 Score=354.65 Aligned_cols=250 Identities=32% Similarity=0.431 Sum_probs=229.9
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHh-cCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS-KGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
-+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+ .+.++.++.+|++++++++++++++.+
T Consensus 15 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 94 (266)
T 4egf_A 15 VLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAE 94 (266)
T ss_dssp GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999999999999999888876 577899999999999999999999999
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccccccCCCCcchhh
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVIAIPMCSIYAS 165 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~ 165 (263)
++ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+..+.++...|++
T Consensus 95 ~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a 173 (266)
T 4egf_A 95 AF-GGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCT 173 (266)
T ss_dssp HH-TSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred Hc-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChHHHH
Confidence 98 8999999999999888888999999999999999999999999999998865 689999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCC
Q 024752 166 SKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245 (263)
Q Consensus 166 sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~ 245 (263)
||+|+++|+++++.|++++||+||+|+||+|+|++.......... ...+....|++++.+|+|++++++||+++.++
T Consensus 174 sK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~---~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~ 250 (266)
T 4egf_A 174 SKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAK---SAPMIARIPLGRFAVPHEVSDAVVWLASDAAS 250 (266)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHH---HHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHH---HHHHHhcCCCCCCcCHHHHHHHHHHHhCchhc
Confidence 999999999999999999999999999999999987655433222 24556678999999999999999999999999
Q ss_pred CccCcEEEeCCCcccc
Q 024752 246 YVTGQVICVDGGYSVT 261 (263)
Q Consensus 246 ~~~G~~i~~dgG~~~~ 261 (263)
++|||.|++|||++++
T Consensus 251 ~itG~~i~vdGG~~~~ 266 (266)
T 4egf_A 251 MINGVDIPVDGGYTMG 266 (266)
T ss_dssp TCCSCEEEESTTGGGC
T ss_pred CccCcEEEECCCccCC
Confidence 9999999999999763
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-53 Score=351.15 Aligned_cols=249 Identities=29% Similarity=0.441 Sum_probs=229.5
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcC-CceEEEeccCCCHHHHHHHHHHHHh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG-LQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
-+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+ .++.++.+|++++++++++++++.+
T Consensus 5 m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (262)
T 3pk0_A 5 MFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVE 84 (262)
T ss_dssp TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 367999999999999999999999999999999999999999999999988765 6799999999999999999999999
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccc-ccCCCCcchhh
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGV-IAIPMCSIYAS 165 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~-~~~~~~~~Y~~ 165 (263)
++ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+. .+.++...|++
T Consensus 85 ~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~a 163 (262)
T 3pk0_A 85 EF-GGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGA 163 (262)
T ss_dssp HH-SCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCHHHHH
T ss_pred Hh-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCChhhHH
Confidence 98 89999999999988888899999999999999999999999999999998888999999999986 78888999999
Q ss_pred HHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCC
Q 024752 166 SKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245 (263)
Q Consensus 166 sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~ 245 (263)
||++++.|+++++.|++++||+||+|+||+++|++...... +....+....|.+++.+|+|+++++.||+++.++
T Consensus 164 sK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~-----~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~ 238 (262)
T 3pk0_A 164 TKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGE-----EYIASMARSIPAGALGTPEDIGHLAAFLATKEAG 238 (262)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCH-----HHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCH-----HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence 99999999999999999999999999999999998654321 2234556678999999999999999999999999
Q ss_pred CccCcEEEeCCCccccC
Q 024752 246 YVTGQVICVDGGYSVTG 262 (263)
Q Consensus 246 ~~~G~~i~~dgG~~~~~ 262 (263)
++|||.|.+|||+.++.
T Consensus 239 ~itG~~i~vdGG~~~~~ 255 (262)
T 3pk0_A 239 YITGQAIAVDGGQVLPE 255 (262)
T ss_dssp TCCSCEEEESTTTTCCS
T ss_pred CCcCCEEEECCCeecCc
Confidence 99999999999998753
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-53 Score=348.11 Aligned_cols=244 Identities=31% Similarity=0.452 Sum_probs=224.3
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
.+++++|++|||||++|||+++|++|+++|++|++++|+++.+++..+++.. ++.++.+|++|+++++++++++.++
T Consensus 4 ~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~ 80 (248)
T 3op4_A 4 FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD---NGKGMALNVTNPESIEAVLKAITDE 80 (248)
T ss_dssp TTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG---GEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc---cceEEEEeCCCHHHHHHHHHHHHHH
Confidence 4679999999999999999999999999999999999999988888777643 4678899999999999999999999
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+ +++|+||||||+....++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+..+.++...|++||
T Consensus 81 ~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 159 (248)
T 3op4_A 81 F-GGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAK 159 (248)
T ss_dssp H-CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHH
Confidence 9 899999999999888888899999999999999999999999999999988889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
+|+++|+++++.|++++||+||+|+||+++|++...... +.........|.+++.+|+|+++++.||+++.++++
T Consensus 160 ~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-----~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~i 234 (248)
T 3op4_A 160 AGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALND-----EQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYI 234 (248)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCH-----HHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCH-----HHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccCCc
Confidence 999999999999999999999999999999998765422 122445567899999999999999999999999999
Q ss_pred cCcEEEeCCCccc
Q 024752 248 TGQVICVDGGYSV 260 (263)
Q Consensus 248 ~G~~i~~dgG~~~ 260 (263)
|||.|++|||+.+
T Consensus 235 tG~~i~vdgG~~~ 247 (248)
T 3op4_A 235 TGETLHVNGGMYM 247 (248)
T ss_dssp CSCEEEESTTSSC
T ss_pred cCcEEEECCCeec
Confidence 9999999999864
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-52 Score=350.29 Aligned_cols=252 Identities=29% Similarity=0.445 Sum_probs=227.4
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
.+.+++++|++|||||++|||++++++|+++|++|++++|+++.++++.+++ +.++.++.+|++++++++++++++.
T Consensus 20 ~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~ 96 (277)
T 4dqx_A 20 FQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI---GSKAFGVRVDVSSAKDAESMVEKTT 96 (277)
T ss_dssp --CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred cccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHH
Confidence 5668899999999999999999999999999999999999998888777664 5678999999999999999999999
Q ss_pred hhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhh
Q 024752 86 SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYAS 165 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~ 165 (263)
+++ +++|+||||||+....++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+..+.++...|++
T Consensus 97 ~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a 175 (277)
T 4dqx_A 97 AKW-GRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVA 175 (277)
T ss_dssp HHH-SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred HHc-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhHHH
Confidence 998 8999999999998888888999999999999999999999999999999988899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccc-ccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCC
Q 024752 166 SKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVE-KDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244 (263)
Q Consensus 166 sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~ 244 (263)
||+|+++|+++++.|++++||+||+|+||+|+|++..... ...........+....|.+++.+|+|+|++++||+++.+
T Consensus 176 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~~ 255 (277)
T 4dqx_A 176 SKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLASDRS 255 (277)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcccCCcCHHHHHHHHHHHhCCcc
Confidence 9999999999999999999999999999999999854332 222222233445667899999999999999999999999
Q ss_pred CCccCcEEEeCCCcccc
Q 024752 245 SYVTGQVICVDGGYSVT 261 (263)
Q Consensus 245 ~~~~G~~i~~dgG~~~~ 261 (263)
+++||+.|++|||+++.
T Consensus 256 ~~itG~~i~vdGG~~~~ 272 (277)
T 4dqx_A 256 RFATGSILTVDGGSSIG 272 (277)
T ss_dssp TTCCSCEEEESSSSSSC
T ss_pred CCCcCCEEEECCchhhh
Confidence 99999999999999875
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-52 Score=354.21 Aligned_cols=255 Identities=27% Similarity=0.384 Sum_probs=223.4
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
+.-+++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...+.++.++.+|++|+++++++++++.
T Consensus 21 ~~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 100 (283)
T 3v8b_A 21 QSMMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLV 100 (283)
T ss_dssp ------CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred hhhcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 34567899999999999999999999999999999999999999999999988778889999999999999999999999
Q ss_pred hhcCCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccc--cCCCCcc
Q 024752 86 SQFDGKLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVI--AIPMCSI 162 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~--~~~~~~~ 162 (263)
+++ +++|+||||||+... .++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+.. +.++...
T Consensus 101 ~~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~~ 179 (283)
T 3v8b_A 101 LKF-GHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATA 179 (283)
T ss_dssp HHH-SCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCHH
T ss_pred HHh-CCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCchH
Confidence 998 899999999998755 788899999999999999999999999999999998889999999999977 7788899
Q ss_pred hhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHH--HHHhHhcCCC--CCCCChhhHHHHHHH
Q 024752 163 YASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEH--ANRMVLRTPM--LRPGEPNEVSSVVAF 238 (263)
Q Consensus 163 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~va~~~~~ 238 (263)
|++||+|+++|+++++.|++++||+||+|+||+|+|++............. ........|. +++++|+|+|++++|
T Consensus 180 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~f 259 (283)
T 3v8b_A 180 YTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRF 259 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999998654322211000 1222334555 889999999999999
Q ss_pred HcCCCCCCccCcEEEeCCCcccc
Q 024752 239 LCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 239 l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
|+++.++++|||.|.+|||+++.
T Consensus 260 L~s~~a~~itG~~i~vdGG~~~~ 282 (283)
T 3v8b_A 260 LVSERARHVTGSPVWIDGGQGLL 282 (283)
T ss_dssp HTSGGGTTCCSCEEEESTTHHHH
T ss_pred HcCccccCCcCCEEEECcCcccc
Confidence 99999999999999999998753
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-52 Score=352.09 Aligned_cols=248 Identities=30% Similarity=0.468 Sum_probs=229.4
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
..++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.+.+.++.++.+|++|+++++++++++.++
T Consensus 23 ~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 102 (270)
T 3ftp_A 23 DKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKE 102 (270)
T ss_dssp CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence 34588999999999999999999999999999999999999999999998887888899999999999999999999999
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+ +++|+||||||+....++.+.+.++|++.+++|+.|+++++++++|.|.+++.|+||++||..+..+.++...|++||
T Consensus 103 ~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 181 (270)
T 3ftp_A 103 F-GALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAK 181 (270)
T ss_dssp H-SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHH
T ss_pred c-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCchhHHHHH
Confidence 8 899999999999888888899999999999999999999999999999988889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
+|++.|+++++.|++++||+||+|+||+|+|++...... +....+....|++++.+|+|++++++||+++.+.++
T Consensus 182 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-----~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~i 256 (270)
T 3ftp_A 182 AGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQ-----EQQTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYI 256 (270)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCH-----HHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCH-----HHHHHHHhcCCCCCCCCHHHHHHHHHHHhCCCcCCc
Confidence 999999999999999999999999999999998765422 122445567899999999999999999999999999
Q ss_pred cCcEEEeCCCcccc
Q 024752 248 TGQVICVDGGYSVT 261 (263)
Q Consensus 248 ~G~~i~~dgG~~~~ 261 (263)
||+.|++|||+.++
T Consensus 257 tG~~i~vdGG~~~s 270 (270)
T 3ftp_A 257 TGTTLHVNGGMFMS 270 (270)
T ss_dssp CSCEEEESTTSSCC
T ss_pred cCcEEEECCCcccC
Confidence 99999999999864
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-52 Score=346.84 Aligned_cols=259 Identities=60% Similarity=0.992 Sum_probs=224.6
Q ss_pred ccccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHH
Q 024752 5 REQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 5 ~~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 84 (263)
....|++++|+++||||++|||++++++|+++|++|++++|+++.+++..+++...+.++.++.+|++++++++++++++
T Consensus 13 ~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 92 (273)
T 1ae1_A 13 NEGRWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTV 92 (273)
T ss_dssp ---CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred ccccCCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHH
Confidence 34567899999999999999999999999999999999999999988888888777778999999999999999999999
Q ss_pred HhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchh
Q 024752 85 SSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYA 164 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~ 164 (263)
.+.+++++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|+
T Consensus 93 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~ 172 (273)
T 1ae1_A 93 AHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYS 172 (273)
T ss_dssp HHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHH
T ss_pred HHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchhH
Confidence 99875689999999999877888889999999999999999999999999999887789999999999999989999999
Q ss_pred hHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccch-hHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 165 SSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSN-FLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 165 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
+||++++.++++++.|++++||+||+|+||+++|++......... ..+....+....|.+++.+|+|+|++++||+++.
T Consensus 173 asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~ 252 (273)
T 1ae1_A 173 ASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPA 252 (273)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence 999999999999999999999999999999999998754322100 1111233445678999999999999999999999
Q ss_pred CCCccCcEEEeCCCccccCC
Q 024752 244 TSYVTGQVICVDGGYSVTGF 263 (263)
Q Consensus 244 ~~~~~G~~i~~dgG~~~~~~ 263 (263)
++++||+.|.+|||++++|+
T Consensus 253 ~~~~tG~~i~vdGG~~~~~~ 272 (273)
T 1ae1_A 253 ASYITGQIIWADGGFTANGG 272 (273)
T ss_dssp GTTCCSCEEEESTTGGGCSC
T ss_pred ccCcCCCEEEECCCcccCCC
Confidence 99999999999999998875
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-52 Score=350.54 Aligned_cols=251 Identities=29% Similarity=0.402 Sum_probs=228.5
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCC---ceEEEeccCCCHHHHHHHHHH
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL---QVSGSVCDLKIRAQREKLMET 83 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~ 83 (263)
+.+++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++.+.+. ++.++.+|+++++++++++++
T Consensus 5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 84 (281)
T 3svt_A 5 MQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDA 84 (281)
T ss_dssp ---CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHH
T ss_pred CccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999887654 789999999999999999999
Q ss_pred HHhhcCCCccEEEeCCCC-CCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcc
Q 024752 84 VSSQFDGKLNILINNAGT-FIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSI 162 (263)
Q Consensus 84 ~~~~~~~~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~ 162 (263)
+.+++ +++|+||||||+ ....++.+.+.++|++.+++|+.|+++++++++|.|.+++.|+||++||..+..+.++...
T Consensus 85 ~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~ 163 (281)
T 3svt_A 85 VTAWH-GRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGA 163 (281)
T ss_dssp HHHHH-SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTCTH
T ss_pred HHHHc-CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCChh
Confidence 99998 899999999998 4456788899999999999999999999999999999988899999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCC
Q 024752 163 YASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS 242 (263)
Q Consensus 163 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~ 242 (263)
|++||++++.|+++++.|++++||+||+|+||+|+|++.......... ...+....|++++++|+|++++++||+++
T Consensus 164 Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~---~~~~~~~~p~~r~~~~~dva~~~~~l~s~ 240 (281)
T 3svt_A 164 YGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAEL---SSDYAMCTPLPRQGEVEDVANMAMFLLSD 240 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHH---HHHHHHHCSSSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHH---HHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence 999999999999999999999999999999999999998765333222 24555678999999999999999999999
Q ss_pred CCCCccCcEEEeCCCcccc
Q 024752 243 ATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 243 ~~~~~~G~~i~~dgG~~~~ 261 (263)
.++++|||.|++|||+.++
T Consensus 241 ~~~~itG~~~~vdgG~~~~ 259 (281)
T 3svt_A 241 AASFVTGQVINVDGGQMLR 259 (281)
T ss_dssp GGTTCCSCEEEESTTGGGS
T ss_pred ccCCCCCCEEEeCCChhcc
Confidence 9999999999999999876
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-52 Score=351.74 Aligned_cols=251 Identities=31% Similarity=0.410 Sum_probs=230.6
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcC-CceEEEeccCCCHHHHHHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG-LQVSGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~ 84 (263)
+..+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+ .++.++.+|++++++++++++++
T Consensus 34 ~~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 113 (293)
T 3rih_A 34 KVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTV 113 (293)
T ss_dssp CCTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHH
Confidence 44567899999999999999999999999999999999999999999999887765 67999999999999999999999
Q ss_pred HhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccc-ccCCCCcch
Q 024752 85 SSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGV-IAIPMCSIY 163 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~-~~~~~~~~Y 163 (263)
.+++ +++|+||||||+....++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+. .+.++...|
T Consensus 114 ~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~~~Y 192 (293)
T 3rih_A 114 VDAF-GALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHY 192 (293)
T ss_dssp HHHH-SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTCHHH
T ss_pred HHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCCHHH
Confidence 9999 89999999999988888899999999999999999999999999999998888999999999986 788889999
Q ss_pred hhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 164 ASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 164 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
++||++++.|+++++.|++++||+||+|+||+|+|++...... +....+....|++++++|+|++++++||+++.
T Consensus 193 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~-----~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~ 267 (293)
T 3rih_A 193 GASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGE-----EYISGMARSIPMGMLGSPVDIGHLAAFLATDE 267 (293)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCH-----HHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccH-----HHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcc
Confidence 9999999999999999999999999999999999998754321 22245566789999999999999999999999
Q ss_pred CCCccCcEEEeCCCccccC
Q 024752 244 TSYVTGQVICVDGGYSVTG 262 (263)
Q Consensus 244 ~~~~~G~~i~~dgG~~~~~ 262 (263)
++++||+.|++|||+.+.+
T Consensus 268 a~~itG~~i~vdGG~~~~~ 286 (293)
T 3rih_A 268 AGYITGQAIVVDGGQVLPE 286 (293)
T ss_dssp GTTCCSCEEEESTTTTCBS
T ss_pred ccCCCCCEEEECCCccCCC
Confidence 9999999999999998753
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-52 Score=349.63 Aligned_cols=252 Identities=24% Similarity=0.372 Sum_probs=222.4
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCC----------------chhHHHHHHHHHhcCCceEEEeccC
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN----------------ETELNQRIQEWKSKGLQVSGSVCDL 71 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~----------------~~~~~~~~~~~~~~~~~~~~~~~D~ 71 (263)
..+++||++|||||++|||+++|++|+++|++|++++|+ .+.+++..+++...+.++.++.+|+
T Consensus 6 ~~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv 85 (286)
T 3uve_A 6 TGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDV 85 (286)
T ss_dssp CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCT
T ss_pred CcccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCC
Confidence 346899999999999999999999999999999999887 6777778888877788899999999
Q ss_pred CCHHHHHHHHHHHHhhcCCCccEEEeCCCCCCCCC-CCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEc
Q 024752 72 KIRAQREKLMETVSSQFDGKLNILINNAGTFIPKE-TTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFIS 149 (263)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vs 149 (263)
+++++++++++++.+++ +++|+||||||+..... +.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++|
T Consensus 86 ~~~~~v~~~~~~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~is 164 (286)
T 3uve_A 86 RDYDALKAAVDSGVEQL-GRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTS 164 (286)
T ss_dssp TCHHHHHHHHHHHHHHH-SCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHh-CCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEEC
Confidence 99999999999999998 89999999999987754 78899999999999999999999999999998865 68999999
Q ss_pred cccccccCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccc---------cchhH--HHHHHhH
Q 024752 150 SVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEK---------DSNFL--EHANRMV 218 (263)
Q Consensus 150 S~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~---------~~~~~--~~~~~~~ 218 (263)
|..+..+.++...|++||+++++|+++++.|++++||+||+|+||+|+|++...... ..... ....+..
T Consensus 165 S~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (286)
T 3uve_A 165 SVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMF 244 (286)
T ss_dssp CGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHTT
T ss_pred chhhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999754211 01111 1111233
Q ss_pred hcCCCCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 219 LRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 219 ~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
...| +++.+|+|++++++||+++.++++|||.|++|||++++
T Consensus 245 ~~~p-~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l~ 286 (286)
T 3uve_A 245 HTLP-IPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCLK 286 (286)
T ss_dssp CSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred hccC-CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCccccc
Confidence 4556 88899999999999999999999999999999999864
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-52 Score=348.20 Aligned_cols=250 Identities=30% Similarity=0.423 Sum_probs=225.2
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
...++++||++|||||++|||+++|++|+++|++|++++|+ +..++..+++...+.++.++.+|++++++++++.+.+
T Consensus 24 ~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~- 101 (273)
T 3uf0_A 24 TGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGGSAEAVVADLADLEGAANVAEEL- 101 (273)
T ss_dssp -CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHH-
T ss_pred ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH-
Confidence 44678999999999999999999999999999999999976 5567777888777888999999999999999995554
Q ss_pred hhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhh
Q 024752 86 SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYAS 165 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~ 165 (263)
+++ +++|+||||||+....++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+..+.++...|++
T Consensus 102 ~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~a 180 (273)
T 3uf0_A 102 AAT-RRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAA 180 (273)
T ss_dssp HHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHHHHH
T ss_pred Hhc-CCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChhHHH
Confidence 455 7999999999999888888999999999999999999999999999999888899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCC
Q 024752 166 SKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245 (263)
Q Consensus 166 sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~ 245 (263)
||+|++.|+++++.|++++||+||+|+||+|+|++.......+.. ...+....|.+++.+|+|++++++||+++.++
T Consensus 181 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~---~~~~~~~~p~~r~~~pedva~~v~~L~s~~a~ 257 (273)
T 3uf0_A 181 SKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDER---AAEITARIPAGRWATPEDMVGPAVFLASDAAS 257 (273)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHH---HHHHHHHSTTSSCBCGGGGHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHH---HHHHHhcCCCCCCCCHHHHHHHHHHHhCchhc
Confidence 999999999999999999999999999999999987665433322 24556678999999999999999999999999
Q ss_pred CccCcEEEeCCCcccc
Q 024752 246 YVTGQVICVDGGYSVT 261 (263)
Q Consensus 246 ~~~G~~i~~dgG~~~~ 261 (263)
++|||.|++|||+.++
T Consensus 258 ~itG~~i~vdGG~~~s 273 (273)
T 3uf0_A 258 YVHGQVLAVDGGWLAS 273 (273)
T ss_dssp TCCSCEEEESTTGGGC
T ss_pred CCcCCEEEECcCccCC
Confidence 9999999999999864
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-52 Score=348.61 Aligned_cols=245 Identities=32% Similarity=0.454 Sum_probs=226.0
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeC-CchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-NETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
.+++++|++|||||++|||+++|++|+++|++|++++| +.+..+++.+++...+.++.++.+|++|+++++++++++.+
T Consensus 23 ~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~ 102 (269)
T 4dmm_A 23 ALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIE 102 (269)
T ss_dssp -CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999888 67777888888888788899999999999999999999999
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhH
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASS 166 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s 166 (263)
++ +++|+||||||+....++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+..+.++...|++|
T Consensus 103 ~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 181 (269)
T 4dmm_A 103 RW-GRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAA 181 (269)
T ss_dssp HH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCHHHHHH
T ss_pred Hc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCchhHHHH
Confidence 98 89999999999988888888999999999999999999999999999998888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCC-CCC
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS-ATS 245 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~-~~~ 245 (263)
|+|+++|+++++.|++++||+||+|+||+|+|++...... .......|++++++|+|++++++||+++ .+.
T Consensus 182 K~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~--------~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~~ 253 (269)
T 4dmm_A 182 KAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAA--------EKLLEVIPLGRYGEAAEVAGVVRFLAADPAAA 253 (269)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHH--------HHHGGGCTTSSCBCHHHHHHHHHHHHHCGGGG
T ss_pred HHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccH--------HHHHhcCCCCCCCCHHHHHHHHHHHhCCcccC
Confidence 9999999999999999999999999999999998754321 3445567999999999999999999998 788
Q ss_pred CccCcEEEeCCCcccc
Q 024752 246 YVTGQVICVDGGYSVT 261 (263)
Q Consensus 246 ~~~G~~i~~dgG~~~~ 261 (263)
++|||.|++|||+.++
T Consensus 254 ~itG~~i~vdGG~~~s 269 (269)
T 4dmm_A 254 YITGQVINIDGGLVMA 269 (269)
T ss_dssp GCCSCEEEESTTSCCC
T ss_pred CCcCCEEEECCCeecC
Confidence 9999999999999874
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-52 Score=345.69 Aligned_cols=249 Identities=22% Similarity=0.247 Sum_probs=227.6
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
.+++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++.+|++++++++++++++.+++
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~- 86 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAY- 86 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT-
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence 4789999999999999999999999999999999999999999999998888889999999999999999999999998
Q ss_pred CCccEEEeCCCCC-CCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 90 GKLNILINNAGTF-IPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 90 ~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|++++ |+||++||..+..+.++...|++||+
T Consensus 87 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKa 165 (264)
T 3ucx_A 87 GRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAKYGAYKMAKS 165 (264)
T ss_dssp SCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTTCHHHHHHHH
T ss_pred CCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCccHHHHHHHH
Confidence 8999999999986 456788899999999999999999999999999998865 99999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccc------hhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCC
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDS------NFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS 242 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~ 242 (263)
++++|+++++.|++++||+||+|+||+|+|++........ ...+....+....|++++.+|+|++++++||+++
T Consensus 166 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~ 245 (264)
T 3ucx_A 166 ALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMASD 245 (264)
T ss_dssp HHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHHHHHHHHcCc
Confidence 9999999999999999999999999999999876543211 1122335556678999999999999999999999
Q ss_pred CCCCccCcEEEeCCCccc
Q 024752 243 ATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 243 ~~~~~~G~~i~~dgG~~~ 260 (263)
.++++|||.|++|||+.+
T Consensus 246 ~~~~itG~~i~vdGG~~~ 263 (264)
T 3ucx_A 246 LASGITGQALDVNCGEYK 263 (264)
T ss_dssp GGTTCCSCEEEESTTSSC
T ss_pred cccCCCCCEEEECCCccC
Confidence 999999999999999875
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-52 Score=344.74 Aligned_cols=250 Identities=25% Similarity=0.374 Sum_probs=225.2
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
.++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++.+.+.++.++.+|++++++++++++++.+++
T Consensus 2 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 81 (257)
T 3imf_A 2 NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF 81 (257)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 35789999999999999999999999999999999999999999998887777789999999999999999999999998
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHh-hCCCceEEEEccccccccCCCCcchhhHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLK-SAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|. +++.|+||++||..+..+.++...|++||
T Consensus 82 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 160 (257)
T 3imf_A 82 -GRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAK 160 (257)
T ss_dssp -SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHHH
T ss_pred -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHHH
Confidence 8999999999998888888999999999999999999999999999994 45579999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHc-cCCcEEEEEecCcccCCccccccc-cchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCC
Q 024752 168 VAMNQLTKNLACEWA-KDKIRVNTVAPWVIRTPLLDTVEK-DSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~-~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~ 245 (263)
+++++|+++++.|++ ++||+||+|+||+|+|++...... .+... .......|++++.+|+|++++++||+++.++
T Consensus 161 aa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~---~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~ 237 (257)
T 3imf_A 161 AGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMA---KRTIQSVPLGRLGTPEEIAGLAYYLCSDEAA 237 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCS---HHHHTTSTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHH---HHHHhcCCCCCCcCHHHHHHHHHHHcCchhc
Confidence 999999999999997 779999999999999997644221 11111 3445567999999999999999999999999
Q ss_pred CccCcEEEeCCCccccC
Q 024752 246 YVTGQVICVDGGYSVTG 262 (263)
Q Consensus 246 ~~~G~~i~~dgG~~~~~ 262 (263)
++||+.|.+|||++++.
T Consensus 238 ~itG~~i~vdGG~~~~~ 254 (257)
T 3imf_A 238 YINGTCMTMDGGQHLHQ 254 (257)
T ss_dssp TCCSCEEEESTTTTSCC
T ss_pred CccCCEEEECCCcccCC
Confidence 99999999999998864
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-52 Score=348.87 Aligned_cols=253 Identities=29% Similarity=0.443 Sum_probs=225.8
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
....+++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+.++.++.+|++++++++++++++.+
T Consensus 18 ~~~m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 97 (279)
T 3sju_A 18 GSHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVE 97 (279)
T ss_dssp -------CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 33447899999999999999999999999999999999999999999999988888899999999999999999999999
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhH--HHhhCCCceEEEEccccccccCCCCcchh
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHP--LLKSAGNGNIIFISSVAGVIAIPMCSIYA 164 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~ 164 (263)
++ +++|+||||||+....++.+.+.++|++.+++|+.|+++++++++| .|++++.|+||++||..+..+.++...|+
T Consensus 98 ~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~ 176 (279)
T 3sju_A 98 RF-GPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYT 176 (279)
T ss_dssp HH-CSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHH
T ss_pred Hc-CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHH
Confidence 98 8999999999998888888899999999999999999999999999 68877789999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccc------hhHHHHHHhHhcCCCCCCCChhhHHHHHHH
Q 024752 165 SSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDS------NFLEHANRMVLRTPMLRPGEPNEVSSVVAF 238 (263)
Q Consensus 165 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ 238 (263)
+||+|+++|+++++.|++++||+||+|+||+|+|++........ ...+....+....|++++.+|+|+|++++|
T Consensus 177 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~ 256 (279)
T 3sju_A 177 ASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGY 256 (279)
T ss_dssp HHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999876532210 112233556667899999999999999999
Q ss_pred HcCCCCCCccCcEEEeCCCccc
Q 024752 239 LCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 239 l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
|+++.++++|||.|++|||++.
T Consensus 257 L~s~~a~~itG~~i~vdGG~~~ 278 (279)
T 3sju_A 257 LVTDAAASITAQALNVCGGLGN 278 (279)
T ss_dssp HTSSGGGGCCSCEEEESTTCCC
T ss_pred HhCccccCcCCcEEEECCCccC
Confidence 9999999999999999999874
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-52 Score=343.32 Aligned_cols=245 Identities=25% Similarity=0.367 Sum_probs=221.9
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
.+++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++ +.++.++.+|++++++++++++++.+++
T Consensus 2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 78 (247)
T 3rwb_A 2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---GKKARAIAADISDPGSVKALFAEIQALT 78 (247)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 3588999999999999999999999999999999999999888887776 5678999999999999999999999998
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccccccCCCCcchhhHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|++++ .|+||++||..+..+.++...|++||
T Consensus 79 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 157 (247)
T 3rwb_A 79 -GGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAK 157 (247)
T ss_dssp -SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHH
T ss_pred -CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHH
Confidence 8999999999998888888999999999999999999999999999998876 69999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
+++++|+++++.|++++||+||+|+||+|+|++......... . .......|++++.+|+|+++++.||+++.++++
T Consensus 158 aa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~-~---~~~~~~~~~~r~~~pedva~~v~~L~s~~~~~i 233 (247)
T 3rwb_A 158 GGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEA-F---GFVEMLQAMKGKGQPEHIADVVSFLASDDARWI 233 (247)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGG-H---HHHHHHSSSCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHH-H---HHHhcccccCCCcCHHHHHHHHHHHhCccccCC
Confidence 999999999999999999999999999999998765432221 1 112223688999999999999999999999999
Q ss_pred cCcEEEeCCCcccc
Q 024752 248 TGQVICVDGGYSVT 261 (263)
Q Consensus 248 ~G~~i~~dgG~~~~ 261 (263)
|||.|++|||+..+
T Consensus 234 tG~~i~vdGG~~~~ 247 (247)
T 3rwb_A 234 TGQTLNVDAGMVRH 247 (247)
T ss_dssp CSCEEEESTTSSCC
T ss_pred CCCEEEECCCccCC
Confidence 99999999998753
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-51 Score=346.72 Aligned_cols=247 Identities=31% Similarity=0.478 Sum_probs=226.6
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
+.+++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++.+|++++++++++++++.+
T Consensus 26 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 105 (276)
T 3r1i_A 26 DLFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTG 105 (276)
T ss_dssp GGGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999999988888899999999999999999999999
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccccccC--CCCcch
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVIAI--PMCSIY 163 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~--~~~~~Y 163 (263)
++ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++ +++||++||..+..+. ++...|
T Consensus 106 ~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~Y 184 (276)
T 3r1i_A 106 EL-GGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHY 184 (276)
T ss_dssp HH-SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHHH
T ss_pred Hc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcchH
Confidence 99 8999999999998888888899999999999999999999999999998876 4899999999887654 356789
Q ss_pred hhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 164 ASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 164 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
++||++++.|+++++.|++++||+||+|+||+|+|++...... .. ..+....|++++.+|+|++++++||+++.
T Consensus 185 ~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~---~~---~~~~~~~p~~r~~~pedvA~~v~fL~s~~ 258 (276)
T 3r1i_A 185 CTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLAD---YH---ALWEPKIPLGRMGRPEELTGLYLYLASAA 258 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGG---GH---HHHGGGSTTSSCBCGGGSHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchH---HH---HHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence 9999999999999999999999999999999999999865422 11 44456789999999999999999999999
Q ss_pred CCCccCcEEEeCCCccc
Q 024752 244 TSYVTGQVICVDGGYSV 260 (263)
Q Consensus 244 ~~~~~G~~i~~dgG~~~ 260 (263)
++++|||.|++|||++.
T Consensus 259 ~~~itG~~i~vdGG~~~ 275 (276)
T 3r1i_A 259 SSYMTGSDIVIDGGYTC 275 (276)
T ss_dssp GTTCCSCEEEESTTTTC
T ss_pred ccCccCcEEEECcCccC
Confidence 99999999999999875
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-51 Score=346.90 Aligned_cols=250 Identities=30% Similarity=0.377 Sum_probs=226.8
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
+++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...+.++.++.+|++++++++++++++.+++
T Consensus 5 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~- 83 (280)
T 3tox_A 5 RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRF- 83 (280)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence 5889999999999999999999999999999999999999999999987777889999999999999999999999998
Q ss_pred CCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccc-ccCCCCcchhhHH
Q 024752 90 GKLNILINNAGTFI-PKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGV-IAIPMCSIYASSK 167 (263)
Q Consensus 90 ~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~-~~~~~~~~Y~~sK 167 (263)
+++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+. .+.++...|++||
T Consensus 84 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK 163 (280)
T 3tox_A 84 GGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASK 163 (280)
T ss_dssp SCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchhHHHHH
Confidence 89999999999874 467888999999999999999999999999999999888999999999998 6788899999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
+|++.|+++++.|++++||+||+|+||+|+|++........ ..+....+....|++++.+|+|+|++++||+++.++++
T Consensus 164 aa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~a~~i 242 (280)
T 3tox_A 164 AGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGA-APETRGFVEGLHALKRIARPEEIAEAALYLASDGASFV 242 (280)
T ss_dssp HHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTC-CTHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhcccc-CHHHHHHHhccCccCCCcCHHHHHHHHHHHhCccccCC
Confidence 99999999999999999999999999999999876522111 11122445556789999999999999999999999999
Q ss_pred cCcEEEeCCCcccc
Q 024752 248 TGQVICVDGGYSVT 261 (263)
Q Consensus 248 ~G~~i~~dgG~~~~ 261 (263)
|||.|++|||++++
T Consensus 243 tG~~i~vdGG~~~~ 256 (280)
T 3tox_A 243 TGAALLADGGASVT 256 (280)
T ss_dssp CSCEEEESTTGGGC
T ss_pred cCcEEEECCCcccc
Confidence 99999999999875
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-51 Score=347.42 Aligned_cols=251 Identities=24% Similarity=0.378 Sum_probs=222.1
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCC------------chhHHHHHHHHHhcCCceEEEeccCCCHHH
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN------------ETELNQRIQEWKSKGLQVSGSVCDLKIRAQ 76 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 76 (263)
.+++||++|||||++|||+++|++|+++|++|++++|+ .+.+++..+++...+.++.++.+|++++++
T Consensus 24 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 103 (299)
T 3t7c_A 24 GKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDA 103 (299)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred cccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence 45889999999999999999999999999999999987 677788888888888889999999999999
Q ss_pred HHHHHHHHHhhcCCCccEEEeCCCCCCCCC-CCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEcccccc
Q 024752 77 REKLMETVSSQFDGKLNILINNAGTFIPKE-TTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGV 154 (263)
Q Consensus 77 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~ 154 (263)
++++++++.+.+ +++|+||||||+..... +.+.+.++|++.+++|+.|+++++++++|.|.+++ .|+||++||..+.
T Consensus 104 v~~~~~~~~~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~ 182 (299)
T 3t7c_A 104 MQAAVDDGVTQL-GRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGL 182 (299)
T ss_dssp HHHHHHHHHHHH-SCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGT
T ss_pred HHHHHHHHHHHh-CCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhc
Confidence 999999999998 89999999999987754 88899999999999999999999999999988764 7899999999999
Q ss_pred ccCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccc---------cchhH--HHHHHhHhcCCC
Q 024752 155 IAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEK---------DSNFL--EHANRMVLRTPM 223 (263)
Q Consensus 155 ~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~---------~~~~~--~~~~~~~~~~~~ 223 (263)
.+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++...... ..... ..........|
T Consensus 183 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p- 261 (299)
T 3t7c_A 183 RGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLP- 261 (299)
T ss_dssp SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSSSS-
T ss_pred cCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhcccC-
Confidence 9999999999999999999999999999999999999999999999754211 01111 11122333455
Q ss_pred CCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 224 LRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 224 ~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
+++.+|+|+|++++||+++.++++|||.|++|||++++
T Consensus 262 ~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l~ 299 (299)
T 3t7c_A 262 IPYVEPADISNAILFLVSDDARYITGVSLPVDGGALLK 299 (299)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCcccC
Confidence 78899999999999999999999999999999999864
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-51 Score=341.50 Aligned_cols=244 Identities=31% Similarity=0.457 Sum_probs=224.4
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeC-CchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-NETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
+.+|++|||||++|||++++++|+++|++|++++| +.+..+++.+++...+.++.++.+|++|+++++++++++.+++
T Consensus 2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~- 80 (246)
T 3osu_A 2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF- 80 (246)
T ss_dssp CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-
Confidence 46899999999999999999999999999988877 5677888888888888889999999999999999999999998
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
+++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|++||++
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a 160 (246)
T 3osu_A 81 GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAG 160 (246)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHH
Confidence 89999999999988888889999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccC
Q 024752 170 MNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTG 249 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G 249 (263)
++.|+++++.|++++||+||+|+||+++|++...... +....+....|++++++|+|++++++||+++.+.++||
T Consensus 161 ~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~-----~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~itG 235 (246)
T 3osu_A 161 VIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSD-----ELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITG 235 (246)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCH-----HHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGGTTCCS
T ss_pred HHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCH-----HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCC
Confidence 9999999999999999999999999999998765421 12245556789999999999999999999999999999
Q ss_pred cEEEeCCCccc
Q 024752 250 QVICVDGGYSV 260 (263)
Q Consensus 250 ~~i~~dgG~~~ 260 (263)
+.|++|||+.+
T Consensus 236 ~~i~vdgG~~~ 246 (246)
T 3osu_A 236 QTIHVNGGMYM 246 (246)
T ss_dssp CEEEESTTSCC
T ss_pred CEEEeCCCccC
Confidence 99999999864
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-51 Score=344.45 Aligned_cols=261 Identities=29% Similarity=0.406 Sum_probs=224.9
Q ss_pred CcccccccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc--CCceEEEeccCCCHHHHH
Q 024752 1 MSDFREQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGSVCDLKIRAQRE 78 (263)
Q Consensus 1 ~~~~~~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~ 78 (263)
|+....+.+++++|+++||||++|||++++++|+++|++|++++|+++.+++..+++.+. +.++.++.+|++++++++
T Consensus 1 m~~~~~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~ 80 (267)
T 1iy8_A 1 MTATSSPTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVE 80 (267)
T ss_dssp ---------CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHH
T ss_pred CCCCCCCCccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHH
Confidence 777778888999999999999999999999999999999999999999888888887654 667899999999999999
Q ss_pred HHHHHHHhhcCCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC
Q 024752 79 KLMETVSSQFDGKLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI 157 (263)
Q Consensus 79 ~~~~~~~~~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~ 157 (263)
++++++.+++ +++|+||||||+... .++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.
T Consensus 81 ~~~~~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 159 (267)
T 1iy8_A 81 AYVTATTERF-GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI 159 (267)
T ss_dssp HHHHHHHHHH-SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC
T ss_pred HHHHHHHHHc-CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCC
Confidence 9999999998 899999999998766 67778899999999999999999999999999998878999999999999998
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccc--cccchhH-HHHHHhHhcCCCCCCCChhhHHH
Q 024752 158 PMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTV--EKDSNFL-EHANRMVLRTPMLRPGEPNEVSS 234 (263)
Q Consensus 158 ~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~va~ 234 (263)
++...|++||++++.++++++.|++++||+||+|+||+++|++.... ...+... .....+....|.+++.+|+|+++
T Consensus 160 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~ 239 (267)
T 1iy8_A 160 GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAA 239 (267)
T ss_dssp SSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHH
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCCCCCcCHHHHHH
Confidence 89999999999999999999999999999999999999999986542 1011111 11123445578899999999999
Q ss_pred HHHHHcCCCCCCccCcEEEeCCCccccC
Q 024752 235 VVAFLCLSATSYVTGQVICVDGGYSVTG 262 (263)
Q Consensus 235 ~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 262 (263)
+++||+++.+++++|+.|.+|||+++++
T Consensus 240 ~v~~l~s~~~~~~tG~~i~vdGG~~~~~ 267 (267)
T 1iy8_A 240 VVAFLLSDDASYVNATVVPIDGGQSAAY 267 (267)
T ss_dssp HHHHHTSGGGTTCCSCEEEESTTTTTBC
T ss_pred HHHHHcCccccCCCCCEEEECCCcccCC
Confidence 9999999988999999999999998753
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-51 Score=344.54 Aligned_cols=252 Identities=28% Similarity=0.346 Sum_probs=221.9
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCC------------chhHHHHHHHHHhcCCceEEEeccCCCHHH
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN------------ETELNQRIQEWKSKGLQVSGSVCDLKIRAQ 76 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 76 (263)
.++++|++|||||++|||+++|++|+++|++|++++|+ .+.+++..+++...+.++.++.+|++++++
T Consensus 6 ~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 85 (281)
T 3s55_A 6 ADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAA 85 (281)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHH
Confidence 46899999999999999999999999999999999997 566677777777778889999999999999
Q ss_pred HHHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc
Q 024752 77 REKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA 156 (263)
Q Consensus 77 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~ 156 (263)
++++++++.+.+ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+
T Consensus 86 v~~~~~~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 164 (281)
T 3s55_A 86 LESFVAEAEDTL-GGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSA 164 (281)
T ss_dssp HHHHHHHHHHHH-TCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC
T ss_pred HHHHHHHHHHhc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCC
Confidence 999999999998 8999999999999888889999999999999999999999999999999888899999999999999
Q ss_pred CCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccc---------cchhHHHHHH-hHhcCCCCCC
Q 024752 157 IPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEK---------DSNFLEHANR-MVLRTPMLRP 226 (263)
Q Consensus 157 ~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~---------~~~~~~~~~~-~~~~~~~~~~ 226 (263)
.++...|++||+++++|+++++.|++++||+||+|+||+|+|++...... .......... .......+++
T Consensus 165 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (281)
T 3s55_A 165 NFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPF 244 (281)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSSCSC
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhccCcCC
Confidence 99999999999999999999999999999999999999999998753210 0111110111 1112223788
Q ss_pred CChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 227 GEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 227 ~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
.+|+|++++++||+++.++++||+.|++|||+.++
T Consensus 245 ~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~ 279 (281)
T 3s55_A 245 LKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR 279 (281)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred CCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence 99999999999999999999999999999999865
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-51 Score=340.18 Aligned_cols=255 Identities=55% Similarity=0.928 Sum_probs=228.7
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
+.|++++|+++||||++|||++++++|+++|++|++++|+++.+++..+++...+.++.++.+|++++++++++++++.+
T Consensus 3 ~~~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (260)
T 2ae2_A 3 GRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVAN 82 (260)
T ss_dssp CTTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999998888888877677899999999999999999999999
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhH
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASS 166 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s 166 (263)
++++++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.++...|++|
T Consensus 83 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s 162 (260)
T 2ae2_A 83 HFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGAT 162 (260)
T ss_dssp HTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred HcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchHHHH
Confidence 87468999999999987777888899999999999999999999999999998878999999999999888899999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
|++++.++++++.|++++||+||+|+||+++|++...........+....+....|.+++.+|+|+|++++||+++.+.+
T Consensus 163 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~ 242 (260)
T 2ae2_A 163 KGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASY 242 (260)
T ss_dssp HHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccC
Confidence 99999999999999999999999999999999987543322222221124445678899999999999999999998899
Q ss_pred ccCcEEEeCCCcccc
Q 024752 247 VTGQVICVDGGYSVT 261 (263)
Q Consensus 247 ~~G~~i~~dgG~~~~ 261 (263)
++|+.|.+|||+.++
T Consensus 243 ~tG~~~~vdgG~~~~ 257 (260)
T 2ae2_A 243 VTGQIIYVDGGLMAN 257 (260)
T ss_dssp CCSCEEEESTTGGGC
T ss_pred CCCCEEEECCCcccc
Confidence 999999999998765
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-51 Score=341.26 Aligned_cols=249 Identities=27% Similarity=0.356 Sum_probs=223.9
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
.++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++ +.++.++.+|++++++++++++++.+++
T Consensus 4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 80 (259)
T 4e6p_A 4 KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---GPAAYAVQMDVTRQDSIDAAIAATVEHA 80 (259)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCceEEEeeCCCHHHHHHHHHHHHHHc
Confidence 3588999999999999999999999999999999999999888887766 4568899999999999999999999998
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccccccCCCCcchhhHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+..+.++...|++||
T Consensus 81 -g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 159 (259)
T 4e6p_A 81 -GGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATK 159 (259)
T ss_dssp -SSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred -CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHHHH
Confidence 8999999999998888888899999999999999999999999999998765 78999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccccc------chhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcC
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKD------SNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCL 241 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s 241 (263)
++++.|+++++.|++++||+||+|+||+++|++....... ....+.........|++++.+|+|++++++||++
T Consensus 160 ~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s 239 (259)
T 4e6p_A 160 AAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLAS 239 (259)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999987553110 0011222445567899999999999999999999
Q ss_pred CCCCCccCcEEEeCCCcccc
Q 024752 242 SATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 242 ~~~~~~~G~~i~~dgG~~~~ 261 (263)
+.++++|||.|++|||+.++
T Consensus 240 ~~~~~itG~~i~vdgG~~~s 259 (259)
T 4e6p_A 240 AESDYIVSQTYNVDGGNWMS 259 (259)
T ss_dssp GGGTTCCSCEEEESTTSSCC
T ss_pred CccCCCCCCEEEECcChhcC
Confidence 99999999999999999865
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-51 Score=339.04 Aligned_cols=247 Identities=29% Similarity=0.441 Sum_probs=229.4
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
|++++|+++||||++|||++++++|+++|++|++++|+++..+++.+++.+.+.++.++.+|++++++++++++++.+++
T Consensus 1 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (247)
T 3lyl_A 1 MSLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAEN 80 (247)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 57899999999999999999999999999999999999999999999998888889999999999999999999999998
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+++|++|||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++.++||++||..+..+.++...|++||+
T Consensus 81 -~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 159 (247)
T 3lyl_A 81 -LAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKA 159 (247)
T ss_dssp -CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred -CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHHHHH
Confidence 8999999999998888888899999999999999999999999999999888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCcc
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~ 248 (263)
+++.|+++++.|++++||+||+|+||+++|++....... .........|.+++.+|+|+++++.||+++.+++++
T Consensus 160 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~t 234 (247)
T 3lyl_A 160 GVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDE-----QKSFIATKIPSGQIGEPKDIAAAVAFLASEEAKYIT 234 (247)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHH-----HHHHHHTTSTTCCCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHH-----HHHHHhhcCCCCCCcCHHHHHHHHHHHhCCCcCCcc
Confidence 999999999999999999999999999999987654321 123445677899999999999999999999999999
Q ss_pred CcEEEeCCCcccc
Q 024752 249 GQVICVDGGYSVT 261 (263)
Q Consensus 249 G~~i~~dgG~~~~ 261 (263)
||.|++|||+.++
T Consensus 235 G~~i~vdgG~~~~ 247 (247)
T 3lyl_A 235 GQTLHVNGGMYMA 247 (247)
T ss_dssp SCEEEESTTSSCC
T ss_pred CCEEEECCCEecC
Confidence 9999999999864
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-51 Score=345.56 Aligned_cols=252 Identities=28% Similarity=0.401 Sum_probs=217.4
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeC-CchhHHHHHHHHHhc-CCceEEEeccCCCHHHHHHHHHHHH
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-NETELNQRIQEWKSK-GLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
-+++++|++|||||++|||+++|++|+++|++|++++| +.+.+++..+++... +.++.++.+|++++++++++++++.
T Consensus 20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 99 (281)
T 3v2h_A 20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVA 99 (281)
T ss_dssp --CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHH
T ss_pred hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHH
Confidence 35688999999999999999999999999999999999 667777888887764 6679999999999999999999999
Q ss_pred hhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhh
Q 024752 86 SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYAS 165 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~ 165 (263)
+++ +++|+||||||+....++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+..+.++...|++
T Consensus 100 ~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a 178 (281)
T 3v2h_A 100 DRF-GGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVA 178 (281)
T ss_dssp HHT-SSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred HHC-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCchHHHH
Confidence 998 8999999999998888888999999999999999999999999999999988899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchh------HHH-HHHhHhcCCCCCCCChhhHHHHHHH
Q 024752 166 SKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNF------LEH-ANRMVLRTPMLRPGEPNEVSSVVAF 238 (263)
Q Consensus 166 sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~------~~~-~~~~~~~~~~~~~~~~~~va~~~~~ 238 (263)
||+++++|+++++.|++++||+||+|+||+|+|++.......... .+. ...+....|.+++.+|+|++++++|
T Consensus 179 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~ 258 (281)
T 3v2h_A 179 AKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLALY 258 (281)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHH
Confidence 999999999999999999999999999999999987654322110 000 1224456789999999999999999
Q ss_pred HcCCCCCCccCcEEEeCCCccc
Q 024752 239 LCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 239 l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
|+++.++++||+.|++|||+++
T Consensus 259 L~s~~a~~itG~~i~vdGG~~~ 280 (281)
T 3v2h_A 259 LAGDDAAQITGTHVSMDGGWTA 280 (281)
T ss_dssp HHSSGGGGCCSCEEEESTTGGG
T ss_pred HcCCCcCCCCCcEEEECCCccC
Confidence 9999999999999999999875
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-51 Score=346.52 Aligned_cols=251 Identities=27% Similarity=0.384 Sum_probs=220.8
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeC-------------CchhHHHHHHHHHhcCCceEEEeccCCCH
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-------------NETELNQRIQEWKSKGLQVSGSVCDLKIR 74 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r-------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 74 (263)
..++++|++|||||++|||+++|++|+++|++|++++| +.+.+++..+++...+.++.++.+|++++
T Consensus 6 ~~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 85 (277)
T 3tsc_A 6 AGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDF 85 (277)
T ss_dssp -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred ccccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCH
Confidence 34689999999999999999999999999999999998 67777888888877788899999999999
Q ss_pred HHHHHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccc
Q 024752 75 AQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAG 153 (263)
Q Consensus 75 ~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~ 153 (263)
++++++++++.+++ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+
T Consensus 86 ~~v~~~~~~~~~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~ 164 (277)
T 3tsc_A 86 DRLRKVVDDGVAAL-GRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAG 164 (277)
T ss_dssp HHHHHHHHHHHHHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhh
Confidence 99999999999998 8999999999999888888999999999999999999999999999998865 689999999999
Q ss_pred cccCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchh------HHHHHHhHhcCCCCCCC
Q 024752 154 VIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNF------LEHANRMVLRTPMLRPG 227 (263)
Q Consensus 154 ~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 227 (263)
..+.++...|++||++++.|+++++.|++++||+||+|+||+|+|++.......... .+.........|. ++.
T Consensus 165 ~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-r~~ 243 (277)
T 3tsc_A 165 MKMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPD-WVA 243 (277)
T ss_dssp TSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCSSSC-SCB
T ss_pred CCCCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhccCC-CCC
Confidence 999999999999999999999999999999999999999999999987542111000 0000112223344 688
Q ss_pred ChhhHHHHHHHHcCCCCCCccCcEEEeCCCccc
Q 024752 228 EPNEVSSVVAFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 228 ~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
+|+|+|++++||+++.++++|||.|.+|||++.
T Consensus 244 ~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~ 276 (277)
T 3tsc_A 244 EPEDIADTVCWLASDESRKVTAAQIPVDQGSTQ 276 (277)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred CHHHHHHHHHHHhCccccCCcCCEEeeCCCccc
Confidence 999999999999999999999999999999864
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-52 Score=345.52 Aligned_cols=244 Identities=29% Similarity=0.427 Sum_probs=212.2
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
-+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++ +.++.++.+|++|+++++++++++.++
T Consensus 22 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 98 (266)
T 3grp_A 22 MFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL---GKDVFVFSANLSDRKSIKQLAEVAERE 98 (266)
T ss_dssp TTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEeecCCHHHHHHHHHHHHHH
Confidence 35789999999999999999999999999999999999998888776654 567899999999999999999999999
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|++||
T Consensus 99 ~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK 177 (266)
T 3grp_A 99 M-EGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAK 177 (266)
T ss_dssp H-TSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHHHHHHH
T ss_pred c-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchhHHHHH
Confidence 8 899999999999888888889999999999999999999999999999988889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
+|++.|+++++.|++++||+||+|+||+|+|++...... +....+....|++++..|+|++++++||+++.++++
T Consensus 178 aa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~-----~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~~~~i 252 (266)
T 3grp_A 178 AGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNE-----KQKEAIMAMIPMKRMGIGEEIAFATVYLASDEAAYL 252 (266)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCH-----HHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCH-----HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCc
Confidence 999999999999999999999999999999998765421 122445567899999999999999999999999999
Q ss_pred cCcEEEeCCCccc
Q 024752 248 TGQVICVDGGYSV 260 (263)
Q Consensus 248 ~G~~i~~dgG~~~ 260 (263)
|||.|++|||+.+
T Consensus 253 tG~~i~vdGG~~~ 265 (266)
T 3grp_A 253 TGQTLHINGGMAM 265 (266)
T ss_dssp CSCEEEESTTC--
T ss_pred cCCEEEECCCeee
Confidence 9999999999875
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-51 Score=347.41 Aligned_cols=248 Identities=27% Similarity=0.394 Sum_probs=202.4
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeC-CchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-NETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
++++|++|||||++|||++++++|+++|++|++++| +.+.+++..+++...+.++.++.+|++++++++++++++.+++
T Consensus 26 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 105 (280)
T 4da9_A 26 QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF 105 (280)
T ss_dssp CCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred ccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 478999999999999999999999999999999985 7788888888888878889999999999999999999999998
Q ss_pred CCCccEEEeCCCC--CCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC---CceEEEEccccccccCCCCcch
Q 024752 89 DGKLNILINNAGT--FIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG---NGNIIFISSVAGVIAIPMCSIY 163 (263)
Q Consensus 89 ~~~id~li~~ag~--~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~iv~vsS~~~~~~~~~~~~Y 163 (263)
+++|+||||||+ ....++.+.+.++|++.+++|+.|+++++++++|.|++++ .|+||++||..+..+.++...|
T Consensus 106 -g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y 184 (280)
T 4da9_A 106 -GRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDY 184 (280)
T ss_dssp -SCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CCHHH
T ss_pred -CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCccHH
Confidence 899999999998 4456788899999999999999999999999999998765 6899999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHh-cCCCCCCCChhhHHHHHHHHcCC
Q 024752 164 ASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVL-RTPMLRPGEPNEVSSVVAFLCLS 242 (263)
Q Consensus 164 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~va~~~~~l~s~ 242 (263)
++||+|++.|+++++.|++++||+||+|+||+|+|++........ . ..... ..|++++.+|+|+|++++||+++
T Consensus 185 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~--~---~~~~~~~~p~~r~~~pedvA~~v~~L~s~ 259 (280)
T 4da9_A 185 CMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKY--D---GLIESGLVPMRRWGEPEDIGNIVAGLAGG 259 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC---------------------------CCBCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhH--H---HHHhhcCCCcCCcCCHHHHHHHHHHHhCc
Confidence 999999999999999999999999999999999999876543211 1 22222 56889999999999999999999
Q ss_pred CCCCccCcEEEeCCCccccCC
Q 024752 243 ATSYVTGQVICVDGGYSVTGF 263 (263)
Q Consensus 243 ~~~~~~G~~i~~dgG~~~~~~ 263 (263)
.++++|||.|++|||++++++
T Consensus 260 ~~~~itG~~i~vdGG~~~~~~ 280 (280)
T 4da9_A 260 QFGFATGSVIQADGGLSIGRL 280 (280)
T ss_dssp TTGGGTTCEEEESTTCC----
T ss_pred cccCCCCCEEEECCCcccCCC
Confidence 999999999999999998764
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-51 Score=341.12 Aligned_cols=245 Identities=31% Similarity=0.420 Sum_probs=221.0
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
+++||++|||||++|||++++++|+++|++|++++|+++.++++.+++ +.++.++.+|++|+++++++++++.+.+
T Consensus 5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~- 80 (255)
T 4eso_A 5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---GPRVHALRSDIADLNEIAVLGAAAGQTL- 80 (255)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHHh-
Confidence 588999999999999999999999999999999999999888877766 4578999999999999999999999998
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
+++|++|||||+....++.+.+.++|++.+++|+.++++++++++|.|++ +|+||++||..+..+.++...|++||++
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKaa 158 (255)
T 4eso_A 81 GAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE--GGSIVFTSSVADEGGHPGMSVYSASKAA 158 (255)
T ss_dssp SSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCGGGSSBCTTBHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc--CCEEEEECChhhcCCCCCchHHHHHHHH
Confidence 89999999999988888889999999999999999999999999999976 5899999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccch-hHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCcc
Q 024752 170 MNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSN-FLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~ 248 (263)
+++|+++++.|++++||+||+|+||+++|++......... ............|++++.+|+|+|++++||+++ ++++|
T Consensus 159 ~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~-~~~it 237 (255)
T 4eso_A 159 LVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAFE-ATFTT 237 (255)
T ss_dssp HHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHHT-CTTCC
T ss_pred HHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCc-CcCcc
Confidence 9999999999999999999999999999998754322221 122223445568999999999999999999998 89999
Q ss_pred CcEEEeCCCcccc
Q 024752 249 GQVICVDGGYSVT 261 (263)
Q Consensus 249 G~~i~~dgG~~~~ 261 (263)
|+.|++|||+..+
T Consensus 238 G~~i~vdGG~~~~ 250 (255)
T 4eso_A 238 GAKLAVDGGLGQK 250 (255)
T ss_dssp SCEEEESTTTTTT
T ss_pred CCEEEECCCcccc
Confidence 9999999998764
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-52 Score=347.53 Aligned_cols=249 Identities=28% Similarity=0.369 Sum_probs=220.4
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
.+++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++ +.++.++.+|++++++++++++++.+++
T Consensus 25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (277)
T 3gvc_A 25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GCGAAACRVDVSDEQQIIAMVDACVAAF 101 (277)
T ss_dssp --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCcceEEEecCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999999999999999999999999888887766 5678899999999999999999999998
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|++||+
T Consensus 102 -g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKa 180 (277)
T 3gvc_A 102 -GGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKA 180 (277)
T ss_dssp -SSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHHHHHH
Confidence 8999999999999888888999999999999999999999999999999988899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccc--hhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDS--NFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
+++.|+++++.|++++||+||+|+||+|+|++........ .............|.+++.+|+|++++++||+++.+++
T Consensus 181 a~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~a~~ 260 (277)
T 3gvc_A 181 GIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDASM 260 (277)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHHSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccccCCCCHHHHHHHHHHHcCCccCC
Confidence 9999999999999999999999999999999875533211 11100011111346788999999999999999999999
Q ss_pred ccCcEEEeCCCcccc
Q 024752 247 VTGQVICVDGGYSVT 261 (263)
Q Consensus 247 ~~G~~i~~dgG~~~~ 261 (263)
+|||.|++|||+..+
T Consensus 261 itG~~i~vdGG~~~~ 275 (277)
T 3gvc_A 261 ITGTTQIADGGTIAA 275 (277)
T ss_dssp CCSCEEEESTTGGGS
T ss_pred ccCcEEEECCcchhc
Confidence 999999999998764
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-51 Score=345.96 Aligned_cols=251 Identities=25% Similarity=0.342 Sum_probs=227.0
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHh-cCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS-KGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
..+++||++|||||++|||++++++|+++|++|++++|+.+..++..+++.. .+.++.++.+|++++++++++++++.+
T Consensus 22 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 101 (277)
T 4fc7_A 22 PDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALK 101 (277)
T ss_dssp TTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 3458999999999999999999999999999999999999998888888754 467899999999999999999999999
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhH
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASS 166 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s 166 (263)
++ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++.|+||++||..+..+.++...|++|
T Consensus 102 ~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 180 (277)
T 4fc7_A 102 EF-GRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSA 180 (277)
T ss_dssp HH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHHHHHH
T ss_pred Hc-CCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHHHHHH
Confidence 98 89999999999888888888999999999999999999999999999988778999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
|+|+++|+++++.|++++||+||+|+||+|+|++........ ...........|++++++|+|++++++||+++.+++
T Consensus 181 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~--~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~~~~ 258 (277)
T 4fc7_A 181 KAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGP--QASLSTKVTASPLQRLGNKTEIAHSVLYLASPLASY 258 (277)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCC--HHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCC--HHHHHHHhccCCCCCCcCHHHHHHHHHHHcCCccCC
Confidence 999999999999999999999999999999998643322111 122345556789999999999999999999999999
Q ss_pred ccCcEEEeCCCcccc
Q 024752 247 VTGQVICVDGGYSVT 261 (263)
Q Consensus 247 ~~G~~i~~dgG~~~~ 261 (263)
+|||.|.+|||+.++
T Consensus 259 itG~~i~vdGG~~~~ 273 (277)
T 4fc7_A 259 VTGAVLVADGGAWLT 273 (277)
T ss_dssp CCSCEEEESTTHHHH
T ss_pred cCCCEEEECCCcccC
Confidence 999999999998764
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-51 Score=341.18 Aligned_cols=251 Identities=28% Similarity=0.413 Sum_probs=223.0
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeC-CchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-NETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 84 (263)
....+++||++|||||++|||++++++|+++|++|+++++ +.+..+++.+++...+.++.++.+|++++++++++++++
T Consensus 11 ~~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 90 (270)
T 3is3_A 11 YIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQA 90 (270)
T ss_dssp CCTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred cCCCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 3445799999999999999999999999999999998765 566678888888888888999999999999999999999
Q ss_pred HhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccc-ccccCCCCcch
Q 024752 85 SSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVA-GVIAIPMCSIY 163 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~-~~~~~~~~~~Y 163 (263)
.+++ +++|+||||||+....++.+.+.++|++.+++|+.|+++++++++|.|++ +|+||++||.. ...+.++...|
T Consensus 91 ~~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y 167 (270)
T 3is3_A 91 VAHF-GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE--GGRIVLTSSNTSKDFSVPKHSLY 167 (270)
T ss_dssp HHHH-SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCTTTTTCCCTTCHHH
T ss_pred HHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCeEEEEeCchhccCCCCCCchh
Confidence 9998 89999999999998888889999999999999999999999999999976 68999999988 56678889999
Q ss_pred hhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccc-------cchhHHHHHHhHhcCCCCCCCChhhHHHHH
Q 024752 164 ASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEK-------DSNFLEHANRMVLRTPMLRPGEPNEVSSVV 236 (263)
Q Consensus 164 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~va~~~ 236 (263)
++||+++++|+++++.|++++||+||+|+||+++|++...... .....+.........|++++.+|+|+++++
T Consensus 168 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v 247 (270)
T 3is3_A 168 SGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVV 247 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 9999999999999999999999999999999999999764321 011122234455678999999999999999
Q ss_pred HHHcCCCCCCccCcEEEeCCCcc
Q 024752 237 AFLCLSATSYVTGQVICVDGGYS 259 (263)
Q Consensus 237 ~~l~s~~~~~~~G~~i~~dgG~~ 259 (263)
+||+++.++++|||.|++|||++
T Consensus 248 ~~L~s~~~~~itG~~i~vdGG~~ 270 (270)
T 3is3_A 248 GFLVSKEGEWVNGKVLTLDGGAA 270 (270)
T ss_dssp HHHTSGGGTTCCSCEEEESTTCC
T ss_pred HHHcCCccCCccCcEEEeCCCCC
Confidence 99999999999999999999974
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-51 Score=342.27 Aligned_cols=246 Identities=27% Similarity=0.381 Sum_probs=213.3
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEe-eCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTC-SRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 84 (263)
.+.|.+++|++|||||++|||+++|++|+++|++|++. .|+.+..+++.+++...+.++.++.+|++++++++++++++
T Consensus 20 ~~~m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 99 (267)
T 3u5t_A 20 FQSMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATA 99 (267)
T ss_dssp -------CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred ccccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 34567889999999999999999999999999999887 66777788888888888888999999999999999999999
Q ss_pred HhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchh
Q 024752 85 SSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYA 164 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~ 164 (263)
.+.+ +++|+||||||+....++.+.+.++|++.+++|+.|+++++++++|.|++ +|+||++||..+..+.++...|+
T Consensus 100 ~~~~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~ 176 (267)
T 3u5t_A 100 EEAF-GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV--GGRIINMSTSQVGLLHPSYGIYA 176 (267)
T ss_dssp HHHH-SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCTHHHHCCTTCHHHH
T ss_pred HHHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCeEEEEeChhhccCCCCchHHH
Confidence 9998 89999999999988888889999999999999999999999999999976 58999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCC
Q 024752 165 SSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244 (263)
Q Consensus 165 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~ 244 (263)
+||+|+++|+++++.|++++||+||+|+||+|+|++........ . ...+....|++++.+|+|+|++++||+++.+
T Consensus 177 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~-~---~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~ 252 (267)
T 3u5t_A 177 AAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDE-V---RDRFAKLAPLERLGTPQDIAGAVAFLAGPDG 252 (267)
T ss_dssp HHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC------------C---HHHHHTSSTTCSCBCHHHHHHHHHHHHSTTT
T ss_pred HHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHH-H---HHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence 99999999999999999999999999999999999875432221 1 2445567899999999999999999999999
Q ss_pred CCccCcEEEeCCCc
Q 024752 245 SYVTGQVICVDGGY 258 (263)
Q Consensus 245 ~~~~G~~i~~dgG~ 258 (263)
.++|||.|.+|||+
T Consensus 253 ~~itG~~i~vdGG~ 266 (267)
T 3u5t_A 253 AWVNGQVLRANGGI 266 (267)
T ss_dssp TTCCSEEEEESSSC
T ss_pred cCccCCEEEeCCCc
Confidence 99999999999996
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-51 Score=344.93 Aligned_cols=251 Identities=20% Similarity=0.269 Sum_probs=223.0
Q ss_pred cccCCCCCCEEEEecCCC--chHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTK--GIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMET 83 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~--giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 83 (263)
...+++++|++|||||+| |||+++|++|+++|++|++++|+.+..+...+.....+ .+.++.+|+++++++++++++
T Consensus 23 ~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~ 101 (296)
T 3k31_A 23 RTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLG-VKLTVPCDVSDAESVDNMFKV 101 (296)
T ss_dssp CCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHT-CCEEEECCTTCHHHHHHHHHH
T ss_pred cchhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC-CeEEEEcCCCCHHHHHHHHHH
Confidence 456779999999999997 99999999999999999999999866555544444333 468899999999999999999
Q ss_pred HHhhcCCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCC
Q 024752 84 VSSQFDGKLNILINNAGTFIP----KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPM 159 (263)
Q Consensus 84 ~~~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~ 159 (263)
+.+++ +++|+||||||+... .++.+.+.++|++.+++|+.++++++++++|.|++ .|+||++||..+..+.++
T Consensus 102 ~~~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~IV~isS~~~~~~~~~ 178 (296)
T 3k31_A 102 LAEEW-GSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN--GGSILTLSYYGAEKVVPH 178 (296)
T ss_dssp HHHHH-SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCCTT
T ss_pred HHHHc-CCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCEEEEEEehhhccCCCC
Confidence 99999 899999999999864 67778899999999999999999999999999976 689999999999999999
Q ss_pred CcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHH
Q 024752 160 CSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFL 239 (263)
Q Consensus 160 ~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l 239 (263)
...|++||+|+++|+++++.|++++||+||+|+||+|+|++........ ..........|++++.+|+|+|++++||
T Consensus 179 ~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~p~~r~~~pedvA~~v~fL 255 (296)
T 3k31_A 179 YNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFH---YILTWNKYNSPLRRNTTLDDVGGAALYL 255 (296)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHH---HHHHHHHHHSTTSSCCCHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchH---HHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999876543222 2234555678999999999999999999
Q ss_pred cCCCCCCccCcEEEeCCCccccCC
Q 024752 240 CLSATSYVTGQVICVDGGYSVTGF 263 (263)
Q Consensus 240 ~s~~~~~~~G~~i~~dgG~~~~~~ 263 (263)
+++.++++|||.|++|||+++.|+
T Consensus 256 ~s~~a~~itG~~i~vdGG~~~~~~ 279 (296)
T 3k31_A 256 LSDLGRGTTGETVHVDCGYHVVGM 279 (296)
T ss_dssp HSGGGTTCCSCEEEESTTGGGCSS
T ss_pred cCCccCCccCCEEEECCCccccCC
Confidence 999999999999999999999874
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-51 Score=342.89 Aligned_cols=251 Identities=29% Similarity=0.426 Sum_probs=220.8
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeC-------------CchhHHHHHHHHHhcCCceEEEeccCCCH
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-------------NETELNQRIQEWKSKGLQVSGSVCDLKIR 74 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r-------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 74 (263)
..+++||++|||||++|||+++|++|+++|++|++++| +.+.++++.+++...+.++.++.+|++++
T Consensus 10 ~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 89 (280)
T 3pgx_A 10 AGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDD 89 (280)
T ss_dssp -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCH
Confidence 35699999999999999999999999999999999998 67788888888888888899999999999
Q ss_pred HHHHHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccc
Q 024752 75 AQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAG 153 (263)
Q Consensus 75 ~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~ 153 (263)
++++++++++.+++ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|++++ .|+||++||..+
T Consensus 90 ~~v~~~~~~~~~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~ 168 (280)
T 3pgx_A 90 AALRELVADGMEQF-GRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAG 168 (280)
T ss_dssp HHHHHHHHHHHHHH-CCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhh
Confidence 99999999999998 8999999999998888888899999999999999999999999999998865 789999999999
Q ss_pred cccCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHH---HHH--hHhcCCCCCCCC
Q 024752 154 VIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEH---ANR--MVLRTPMLRPGE 228 (263)
Q Consensus 154 ~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~ 228 (263)
..+.++...|++||++++.|+++++.|++++||+||+|+||+|+|++............. ... .....|. ++.+
T Consensus 169 ~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-r~~~ 247 (280)
T 3pgx_A 169 LKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPN-GFMT 247 (280)
T ss_dssp TSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCCBTTBCS-SCBC
T ss_pred ccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhhcccCCC-CCCC
Confidence 999999999999999999999999999999999999999999999987542111100000 000 1122344 6889
Q ss_pred hhhHHHHHHHHcCCCCCCccCcEEEeCCCccc
Q 024752 229 PNEVSSVVAFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 229 ~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
|+|+|++++||+++.++++|||.|++|||+..
T Consensus 248 p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~ 279 (280)
T 3pgx_A 248 ADEVADVVAWLAGDGSGTLTGTQIPVDKGALK 279 (280)
T ss_dssp HHHHHHHHHHHHSGGGTTCSSCEEEESTTGGG
T ss_pred HHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence 99999999999999999999999999999864
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-51 Score=345.61 Aligned_cols=249 Identities=28% Similarity=0.365 Sum_probs=225.0
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
.+.++++||+++||||++|||+++|++|+++|++|++++|+++.+++..+++...+.++.++.+|++++++++++++++.
T Consensus 26 ~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~ 105 (275)
T 4imr_A 26 ETIFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAE 105 (275)
T ss_dssp HHHHCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred cccCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHH
Confidence 34467999999999999999999999999999999999999999999999998888889999999999999999999998
Q ss_pred hhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhh
Q 024752 86 SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYAS 165 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~ 165 (263)
+. +++|+||||||+....++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+..+.+....|++
T Consensus 106 ~~--g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~a 183 (275)
T 4imr_A 106 AI--APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAA 183 (275)
T ss_dssp HH--SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred Hh--CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchhhHH
Confidence 76 7899999999998888888899999999999999999999999999999888899999999999988888888999
Q ss_pred HHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcC-CCCCCCChhhHHHHHHHHcCCCC
Q 024752 166 SKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRT-PMLRPGEPNEVSSVVAFLCLSAT 244 (263)
Q Consensus 166 sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~va~~~~~l~s~~~ 244 (263)
||+|++.|+++++.|++++||+||+|+||+|+|++........ .+......... |++++++|+|++++++||+++.+
T Consensus 184 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~--~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~a 261 (275)
T 4imr_A 184 TKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQD--PEGWDEYVRTLNWMGRAGRPEEMVGAALFLASEAC 261 (275)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHC--HHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccC--hHHHHHHHhhcCccCCCcCHHHHHHHHHHHcCccc
Confidence 9999999999999999999999999999999999876543211 11123333333 89999999999999999999999
Q ss_pred CCccCcEEEeCCCc
Q 024752 245 SYVTGQVICVDGGY 258 (263)
Q Consensus 245 ~~~~G~~i~~dgG~ 258 (263)
+++|||.|.+|||+
T Consensus 262 ~~itG~~i~vdGG~ 275 (275)
T 4imr_A 262 SFMTGETIFLTGGY 275 (275)
T ss_dssp TTCCSCEEEESSCC
T ss_pred CCCCCCEEEeCCCC
Confidence 99999999999996
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-50 Score=338.72 Aligned_cols=243 Identities=31% Similarity=0.397 Sum_probs=220.2
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCC-chhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN-ETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
.+++++|++|||||++|||++++++|+++|++|++++++ .+..+++.+++...+.++.++.+|++++++++++++++.+
T Consensus 26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (271)
T 3v2g_A 26 SISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVE 105 (271)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 467999999999999999999999999999999998654 5677788888888788899999999999999999999999
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc-CCCCcchhh
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA-IPMCSIYAS 165 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-~~~~~~Y~~ 165 (263)
++ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++ .|+||++||..+..+ .++...|++
T Consensus 106 ~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~Y~a 182 (271)
T 3v2g_A 106 AL-GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD--GGRIITIGSNLAELVPWPGISLYSA 182 (271)
T ss_dssp HH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCGGGTCCCSTTCHHHHH
T ss_pred Hc-CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEeChhhccCCCCCchHHHH
Confidence 98 89999999999988888889999999999999999999999999999965 689999999877665 688899999
Q ss_pred HHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCC
Q 024752 166 SKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245 (263)
Q Consensus 166 sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~ 245 (263)
||+++++|+++++.|++++||+||+|+||+|+|++...... .. .......|.+++.+|+|+|++++||+++.++
T Consensus 183 sKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~---~~---~~~~~~~~~~r~~~pedvA~~v~fL~s~~~~ 256 (271)
T 3v2g_A 183 SKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGD---HA---EAQRERIATGSYGEPQDIAGLVAWLAGPQGK 256 (271)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCS---SH---HHHHHTCTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccch---hH---HHHHhcCCCCCCCCHHHHHHHHHHHhCcccC
Confidence 99999999999999999999999999999999998764321 11 3445567999999999999999999999999
Q ss_pred CccCcEEEeCCCcc
Q 024752 246 YVTGQVICVDGGYS 259 (263)
Q Consensus 246 ~~~G~~i~~dgG~~ 259 (263)
++|||.|++|||+.
T Consensus 257 ~itG~~i~vdGG~~ 270 (271)
T 3v2g_A 257 FVTGASLTIDGGAN 270 (271)
T ss_dssp TCCSCEEEESTTTT
T ss_pred CccCCEEEeCcCcc
Confidence 99999999999985
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-51 Score=341.45 Aligned_cols=250 Identities=29% Similarity=0.392 Sum_probs=220.1
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc--CCceEEEeccCCCHHHHHHHHHHHH
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
.+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++... +..+..+.+|++++++++++++
T Consensus 5 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~--- 81 (267)
T 3t4x_A 5 HMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE--- 81 (267)
T ss_dssp CCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH---
T ss_pred ccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH---
Confidence 46789999999999999999999999999999999999999999999888765 4568889999999999887765
Q ss_pred hhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhh
Q 024752 86 SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYAS 165 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~ 165 (263)
++ +++|++|||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|++
T Consensus 82 -~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a 159 (267)
T 3t4x_A 82 -KY-PKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSA 159 (267)
T ss_dssp -HC-CCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTCHHHHH
T ss_pred -hc-CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcchHHHH
Confidence 35 7999999999998888888899999999999999999999999999999988899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccccc------chhHHH----HHHhHhcCCCCCCCChhhHHHH
Q 024752 166 SKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKD------SNFLEH----ANRMVLRTPMLRPGEPNEVSSV 235 (263)
Q Consensus 166 sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~------~~~~~~----~~~~~~~~~~~~~~~~~~va~~ 235 (263)
||+|+++|+++++.|++++||+||+|+||+++|++....... ....+. ........|++++++|+|++++
T Consensus 160 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~ 239 (267)
T 3t4x_A 160 TKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHL 239 (267)
T ss_dssp HHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHHHHHH
Confidence 999999999999999999999999999999999976543211 011111 1122234578999999999999
Q ss_pred HHHHcCCCCCCccCcEEEeCCCccccC
Q 024752 236 VAFLCLSATSYVTGQVICVDGGYSVTG 262 (263)
Q Consensus 236 ~~~l~s~~~~~~~G~~i~~dgG~~~~~ 262 (263)
++||+++.++++|||.|++|||+..+-
T Consensus 240 v~fL~s~~~~~itG~~i~vdGG~~~si 266 (267)
T 3t4x_A 240 VTFLSSPLSSAINGSALRIDGGLVRSV 266 (267)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTCSCSC
T ss_pred HHHHcCccccCccCCeEEECCCccccc
Confidence 999999999999999999999998763
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-50 Score=338.80 Aligned_cols=243 Identities=30% Similarity=0.416 Sum_probs=219.8
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
.+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++ +.++.++.+|++++++++++++++.++
T Consensus 6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 82 (271)
T 3tzq_B 6 TAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV---GRGAVHHVVDLTNEVSVRALIDFTIDT 82 (271)
T ss_dssp -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCCeEEEECCCCCHHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999988887776 567889999999999999999999999
Q ss_pred cCCCccEEEeCCCCCC--CCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhh
Q 024752 88 FDGKLNILINNAGTFI--PKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYAS 165 (263)
Q Consensus 88 ~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~ 165 (263)
+ +++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..+.++...|++
T Consensus 83 ~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~a 161 (271)
T 3tzq_B 83 F-GRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYAC 161 (271)
T ss_dssp H-SCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSCHHHHH
T ss_pred c-CCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCChHHHH
Confidence 9 89999999999873 34567889999999999999999999999999999988899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCC
Q 024752 166 SKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245 (263)
Q Consensus 166 sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~ 245 (263)
||++++.|+++++.|++++||+||+|+||+|+|++...... . .....+....|.+++.+|+|++++++||+++.++
T Consensus 162 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~-~---~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~~ 237 (271)
T 3tzq_B 162 TKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLP-Q---PIVDIFATHHLAGRIGEPHEIAELVCFLASDRAA 237 (271)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---C-H---HHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCC-H---HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccC
Confidence 99999999999999999999999999999999998763221 1 1224556678999999999999999999999999
Q ss_pred CccCcEEEeCCCc
Q 024752 246 YVTGQVICVDGGY 258 (263)
Q Consensus 246 ~~~G~~i~~dgG~ 258 (263)
++|||.|.+|||+
T Consensus 238 ~itG~~i~vdGG~ 250 (271)
T 3tzq_B 238 FITGQVIAADSGL 250 (271)
T ss_dssp TCCSCEEEESTTT
T ss_pred CcCCCEEEECCCc
Confidence 9999999999994
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-50 Score=336.17 Aligned_cols=251 Identities=35% Similarity=0.580 Sum_probs=223.8
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHH-HhcCCceEEEeccCCCHHHHHHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEW-KSKGLQVSGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~ 84 (263)
.+..++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++ ...+.++.++.+|++++++++++++++
T Consensus 14 ~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 93 (267)
T 1vl8_A 14 KEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAV 93 (267)
T ss_dssp ---CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 4567799999999999999999999999999999999999999888888777 444667889999999999999999999
Q ss_pred HhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccc-ccccCCCCcch
Q 024752 85 SSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVA-GVIAIPMCSIY 163 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~-~~~~~~~~~~Y 163 (263)
.+++ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||.. +..+.++...|
T Consensus 94 ~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y 172 (267)
T 1vl8_A 94 KEKF-GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAY 172 (267)
T ss_dssp HHHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHH
T ss_pred HHHc-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCCChhH
Confidence 9998 899999999999877788889999999999999999999999999999988789999999998 88888888999
Q ss_pred hhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 164 ASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 164 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
++||++++.|+++++.|++++||+||+|+||+++|++.......+. ....+....|.+++.+|+|+|++++||+++.
T Consensus 173 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~---~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~ 249 (267)
T 1vl8_A 173 AASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPE---KLDYMLKRIPLGRTGVPEDLKGVAVFLASEE 249 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHH---HHHHHHHTCTTSSCBCGGGGHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChH---HHHHHHhhCCCCCCcCHHHHHHHHHHHcCcc
Confidence 9999999999999999999999999999999999998764332111 1133444578889999999999999999998
Q ss_pred CCCccCcEEEeCCCccc
Q 024752 244 TSYVTGQVICVDGGYSV 260 (263)
Q Consensus 244 ~~~~~G~~i~~dgG~~~ 260 (263)
+.+++|+.|.+|||+++
T Consensus 250 ~~~itG~~i~vdGG~~~ 266 (267)
T 1vl8_A 250 AKYVTGQIIFVDGGWTA 266 (267)
T ss_dssp GTTCCSCEEEESTTGGG
T ss_pred ccCCcCCeEEECCCCCC
Confidence 89999999999999875
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-50 Score=344.14 Aligned_cols=250 Identities=28% Similarity=0.426 Sum_probs=220.2
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCC------------chhHHHHHHHHHhcCCceEEEeccCCCHHHH
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN------------ETELNQRIQEWKSKGLQVSGSVCDLKIRAQR 77 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 77 (263)
+++||++|||||++|||+++|++|+++|++|++++|+ .+.+++..+++...+.++.++.+|+++++++
T Consensus 43 ~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v 122 (317)
T 3oec_A 43 RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASL 122 (317)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence 5889999999999999999999999999999999886 6677777778877788899999999999999
Q ss_pred HHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEcccccccc
Q 024752 78 EKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVIA 156 (263)
Q Consensus 78 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~ 156 (263)
+++++++.+++ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+..+
T Consensus 123 ~~~~~~~~~~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~ 201 (317)
T 3oec_A 123 QAVVDEALAEF-GHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRG 201 (317)
T ss_dssp HHHHHHHHHHH-SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSC
T ss_pred HHHHHHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCC
Confidence 99999999998 8999999999999888888999999999999999999999999999998765 689999999999999
Q ss_pred CCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccc---------cchhHHHHH--HhHhcCCCCC
Q 024752 157 IPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEK---------DSNFLEHAN--RMVLRTPMLR 225 (263)
Q Consensus 157 ~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~---------~~~~~~~~~--~~~~~~~~~~ 225 (263)
.++...|++||+|++.|+++++.|++++||+||+|+||+|+|++...... ......... ......| .+
T Consensus 202 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~ 280 (317)
T 3oec_A 202 APGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLP-IP 280 (317)
T ss_dssp CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTTTCSSS-SS
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHhhhccCC-CC
Confidence 99999999999999999999999999999999999999999998643110 011111111 1222334 67
Q ss_pred CCChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 226 PGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 226 ~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
+.+|+||+++++||+++.++++|||.|++|||+.++
T Consensus 281 ~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~~~ 316 (317)
T 3oec_A 281 WVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLAR 316 (317)
T ss_dssp SBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred CCCHHHHHHHHHHHcCCcccCCCCCEEEECcchhhc
Confidence 889999999999999999999999999999999875
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-50 Score=340.19 Aligned_cols=248 Identities=21% Similarity=0.297 Sum_probs=215.2
Q ss_pred CCCCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 9 WSLKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 9 ~~~~~k~vlVtGas--~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
.++++|++|||||+ +|||+++|++|+++|++|++++|+++..+ ..+++.+...++.++.+|++++++++++++++.+
T Consensus 27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (293)
T 3grk_A 27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKK-RVEPLAEELGAFVAGHCDVADAASIDAVFETLEK 105 (293)
T ss_dssp CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHH-HHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHH
Confidence 45899999999999 45999999999999999999999965433 3334333334688999999999999999999999
Q ss_pred hcCCCccEEEeCCCCCC----CCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcc
Q 024752 87 QFDGKLNILINNAGTFI----PKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSI 162 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~ 162 (263)
++ +++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|++ .|+||++||..+..+.++...
T Consensus 106 ~~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~ 182 (293)
T 3grk_A 106 KW-GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD--GGSILTLTYYGAEKVMPNYNV 182 (293)
T ss_dssp HT-SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT--CEEEEEEECGGGTSBCTTTTH
T ss_pred hc-CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCEEEEEeehhhccCCCchHH
Confidence 98 89999999999886 467778899999999999999999999999999976 689999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCC
Q 024752 163 YASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS 242 (263)
Q Consensus 163 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~ 242 (263)
|++||+|++.|+++++.|++++||+||+|+||+|+|++........ ..........|++++.+|+|+|++++||+++
T Consensus 183 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~ 259 (293)
T 3grk_A 183 MGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFR---YILKWNEYNAPLRRTVTIDEVGDVGLYFLSD 259 (293)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHH---HHHHHHHHHSTTSSCCCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchH---HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCc
Confidence 9999999999999999999999999999999999999876543322 2234556678999999999999999999999
Q ss_pred CCCCccCcEEEeCCCccccCC
Q 024752 243 ATSYVTGQVICVDGGYSVTGF 263 (263)
Q Consensus 243 ~~~~~~G~~i~~dgG~~~~~~ 263 (263)
.++++|||.|++|||++++|+
T Consensus 260 ~~~~itG~~i~vdGG~~~~~~ 280 (293)
T 3grk_A 260 LSRSVTGEVHHADSGYHVIGM 280 (293)
T ss_dssp GGTTCCSCEEEESTTGGGBCC
T ss_pred cccCCcceEEEECCCcccCCC
Confidence 999999999999999999875
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-50 Score=338.18 Aligned_cols=249 Identities=28% Similarity=0.389 Sum_probs=220.7
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeC-CchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-NETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 84 (263)
.+.|++++|+++||||++|||+++|++|+++|++|++++| +.+..+.+.+++.+.+.++.++.+|+++++++.++++++
T Consensus 22 ~~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 101 (271)
T 4iin_A 22 SNAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTI 101 (271)
T ss_dssp --CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred hhhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHH
Confidence 5678899999999999999999999999999999999999 555566677777777888999999999999999999999
Q ss_pred HhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchh
Q 024752 85 SSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYA 164 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~ 164 (263)
.+.+ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.++...|+
T Consensus 102 ~~~~-g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~ 180 (271)
T 4iin_A 102 VQSD-GGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYS 180 (271)
T ss_dssp HHHH-SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHH
T ss_pred HHhc-CCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCchHhH
Confidence 9998 899999999999888888889999999999999999999999999999998889999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCC
Q 024752 165 SSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244 (263)
Q Consensus 165 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~ 244 (263)
+||++++.++++++.|++++||+|++|+||+++|++....... ....+....|.+++.+|+|+++++.||+++.+
T Consensus 181 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~-----~~~~~~~~~~~~~~~~p~dvA~~i~~l~s~~~ 255 (271)
T 4iin_A 181 ASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDE-----LKADYVKNIPLNRLGSAKEVAEAVAFLLSDHS 255 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC-----------------CGGGCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHH-----HHHHHHhcCCcCCCcCHHHHHHHHHHHhCCCc
Confidence 9999999999999999999999999999999999987654321 11344556789999999999999999999999
Q ss_pred CCccCcEEEeCCCccc
Q 024752 245 SYVTGQVICVDGGYSV 260 (263)
Q Consensus 245 ~~~~G~~i~~dgG~~~ 260 (263)
+++||+.|++|||+.+
T Consensus 256 ~~itG~~i~vdGG~~~ 271 (271)
T 4iin_A 256 SYITGETLKVNGGLYM 271 (271)
T ss_dssp TTCCSCEEEESTTSCC
T ss_pred CCCcCCEEEeCCCeeC
Confidence 9999999999999874
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-50 Score=333.41 Aligned_cols=253 Identities=30% Similarity=0.431 Sum_probs=224.6
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc-CCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
.|++++|++|||||++|||++++++|+++|++|++++|+++.++++.+++... +.++.++.+|++++++++++++++.+
T Consensus 2 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (263)
T 3ai3_A 2 DMGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRS 81 (263)
T ss_dssp CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 36789999999999999999999999999999999999999888888887654 66789999999999999999999999
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhH
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASS 166 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s 166 (263)
.+ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.++...|++|
T Consensus 82 ~~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s 160 (263)
T 3ai3_A 82 SF-GGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVT 160 (263)
T ss_dssp HH-SSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred Hc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcchHHHH
Confidence 98 89999999999987778888999999999999999999999999999988778999999999999988899999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccccc------chhHHHHHHhHhc-CCCCCCCChhhHHHHHHHH
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKD------SNFLEHANRMVLR-TPMLRPGEPNEVSSVVAFL 239 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~------~~~~~~~~~~~~~-~~~~~~~~~~~va~~~~~l 239 (263)
|++++.++++++.|++++||+||+|+||+++|++....... ....+....+... .|.+++.+|+|++++++||
T Consensus 161 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l 240 (263)
T 3ai3_A 161 KAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFL 240 (263)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999986543110 0011111233334 7889999999999999999
Q ss_pred cCCCCCCccCcEEEeCCCcccc
Q 024752 240 CLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 240 ~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
+++.+.+++|+.|++|||+.++
T Consensus 241 ~s~~~~~~~G~~~~vdgG~~~s 262 (263)
T 3ai3_A 241 CSERATYSVGSAYFVDGGMLKT 262 (263)
T ss_dssp TSTTCTTCCSCEEEESTTCCCC
T ss_pred cCccccCCCCcEEEECCCcccc
Confidence 9998899999999999998764
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-50 Score=335.11 Aligned_cols=252 Identities=26% Similarity=0.393 Sum_probs=224.1
Q ss_pred ccccccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEee-CCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHH
Q 024752 3 DFREQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCS-RNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLM 81 (263)
Q Consensus 3 ~~~~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 81 (263)
....++.+.++|++|||||++|||+++|++|+++|++|++++ |+.+..++..+++...+.++.++.+|+++++++++++
T Consensus 3 ~~~~~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 82 (256)
T 3ezl_A 3 HHHHHHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAF 82 (256)
T ss_dssp ----------CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHH
T ss_pred CCCCCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHH
Confidence 345677789999999999999999999999999999999887 7778888888888877888999999999999999999
Q ss_pred HHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCc
Q 024752 82 ETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCS 161 (263)
Q Consensus 82 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~ 161 (263)
+++.+++ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.++..
T Consensus 83 ~~~~~~~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~ 161 (256)
T 3ezl_A 83 DKVKAEV-GEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQT 161 (256)
T ss_dssp HHHHHHT-CCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCH
T ss_pred HHHHHhc-CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCc
Confidence 9999998 899999999999888888899999999999999999999999999999998889999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcC
Q 024752 162 IYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCL 241 (263)
Q Consensus 162 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s 241 (263)
.|++||+|++.|+++++.|++++||+|++|+||+++|++...... .....+....|.+++.+|+|++++++||++
T Consensus 162 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~dva~~~~~l~s 236 (256)
T 3ezl_A 162 NYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRP-----DVLEKIVATIPVRRLGSPDEIGSIVAWLAS 236 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCH-----HHHHHHHHHSTTSSCBCHHHHHHHHHHHHS
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCH-----HHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999998765432 222455567799999999999999999999
Q ss_pred CCCCCccCcEEEeCCCccc
Q 024752 242 SATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 242 ~~~~~~~G~~i~~dgG~~~ 260 (263)
+.+.+++|+.|++|||+.+
T Consensus 237 ~~~~~~tG~~i~vdgG~~~ 255 (256)
T 3ezl_A 237 EESGFSTGADFSLNGGLHM 255 (256)
T ss_dssp GGGTTCCSCEEEESTTSCC
T ss_pred CcccCCcCcEEEECCCEeC
Confidence 9999999999999999976
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-51 Score=340.94 Aligned_cols=248 Identities=23% Similarity=0.333 Sum_probs=213.1
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCC---chhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN---ETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLME 82 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 82 (263)
...+++++|++|||||++|||+++|++|+++|++|++++|. .+.++++.+++...+.++.++.+|++++++++++++
T Consensus 4 ~~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 83 (262)
T 3ksu_A 4 TKYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFD 83 (262)
T ss_dssp CCCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHH
T ss_pred ccccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence 34578999999999999999999999999999999998664 456777788888778889999999999999999999
Q ss_pred HHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcc
Q 024752 83 TVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSI 162 (263)
Q Consensus 83 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~ 162 (263)
++.+++ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++ .|+||++||..+..+.++...
T Consensus 84 ~~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~ 160 (262)
T 3ksu_A 84 FAEKEF-GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNP--NGHIITIATSLLAAYTGFYST 160 (262)
T ss_dssp HHHHHH-CSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEE--EEEEEEECCCHHHHHHCCCCC
T ss_pred HHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC--CCEEEEEechhhccCCCCCch
Confidence 999998 89999999999998888889999999999999999999999999999943 689999999999998889999
Q ss_pred hhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCC
Q 024752 163 YASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS 242 (263)
Q Consensus 163 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~ 242 (263)
|++||+|+++|+++++.|++++||+||+|+||+|+|++........ ....+....|.+++.+|+|+|++++||+++
T Consensus 161 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~----~~~~~~~~~~~~r~~~pedvA~~v~~L~s~ 236 (262)
T 3ksu_A 161 YAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKE----STAFHKSQAMGNQLTKIEDIAPIIKFLTTD 236 (262)
T ss_dssp -----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC----------------CCCCSCCGGGTHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchH----HHHHHHhcCcccCCCCHHHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999999875533221 113344567889999999999999999999
Q ss_pred CCCCccCcEEEeCCCcccc
Q 024752 243 ATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 243 ~~~~~~G~~i~~dgG~~~~ 261 (263)
++++|||.|.+|||+...
T Consensus 237 -~~~itG~~i~vdGg~~~~ 254 (262)
T 3ksu_A 237 -GWWINGQTIFANGGYTTR 254 (262)
T ss_dssp -TTTCCSCEEEESTTCCCC
T ss_pred -CCCccCCEEEECCCccCC
Confidence 899999999999998764
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-50 Score=335.00 Aligned_cols=251 Identities=30% Similarity=0.415 Sum_probs=209.3
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
..|++++|++|||||++|||++++++|+++|++|++++|+++.++++.+++ +.++.++.+|++++++++++++++.+
T Consensus 3 ~~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (261)
T 3n74_A 3 GSMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI---GDAALAVAADISKEADVDAAVEAALS 79 (261)
T ss_dssp --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHH
Confidence 357899999999999999999999999999999999999999888887765 45789999999999999999999999
Q ss_pred hcCCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC----CceEEEEccccccccCCCCc
Q 024752 87 QFDGKLNILINNAGTFI-PKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG----NGNIIFISSVAGVIAIPMCS 161 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~----~~~iv~vsS~~~~~~~~~~~ 161 (263)
++ +++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|++++ .++||++||..+..+.++..
T Consensus 80 ~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~ 158 (261)
T 3n74_A 80 KF-GKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLA 158 (261)
T ss_dssp HH-SCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCH
T ss_pred hc-CCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCcc
Confidence 98 89999999999876 46677789999999999999999999999999998753 67899999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcC
Q 024752 162 IYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCL 241 (263)
Q Consensus 162 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s 241 (263)
.|+++|++++.|+++++.|++++||+||+|+||+++|++........ ..+....+....|.+++.+|+|++++++||++
T Consensus 159 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s 237 (261)
T 3n74_A 159 WYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGED-SEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCS 237 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--------------------------CTTSSCCCHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccC-cHHHHHHHhhcCCcCCCcCHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999987653221 11222445567789999999999999999999
Q ss_pred CCCCCccCcEEEeCCCccccC
Q 024752 242 SATSYVTGQVICVDGGYSVTG 262 (263)
Q Consensus 242 ~~~~~~~G~~i~~dgG~~~~~ 262 (263)
+.++++|||.|++|||+++.|
T Consensus 238 ~~~~~itG~~i~vdgG~~~~~ 258 (261)
T 3n74_A 238 PQASMITGVALDVDGGRSIGG 258 (261)
T ss_dssp GGGTTCCSCEEEESTTTTC--
T ss_pred CcccCcCCcEEEecCCcccCC
Confidence 999999999999999999865
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-50 Score=335.57 Aligned_cols=245 Identities=29% Similarity=0.370 Sum_probs=209.2
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEe-eCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTC-SRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
+++++|++|||||++|||++++++|+++|++|+++ +|+.+..++..+++...+.++.++.+|++++++++++++++.++
T Consensus 4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (259)
T 3edm_A 4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADK 83 (259)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 56889999999999999999999999999999988 77778888888888877888999999999999999999999999
Q ss_pred cCCCccEEEeCCCCC-CCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccc-ccCCCCcchhh
Q 024752 88 FDGKLNILINNAGTF-IPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGV-IAIPMCSIYAS 165 (263)
Q Consensus 88 ~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~-~~~~~~~~Y~~ 165 (263)
+ +++|+||||||+. ...++.+.+.++|++.+++|+.|+++++++++|.|++ .|+||++||..+. .+.++...|++
T Consensus 84 ~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~a 160 (259)
T 3edm_A 84 F-GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK--GGAIVTFSSQAGRDGGGPGALAYAT 160 (259)
T ss_dssp H-CSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHCCSTTCHHHHH
T ss_pred h-CCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCEEEEEcCHHhccCCCCCcHHHHH
Confidence 9 8999999999987 5577889999999999999999999999999999977 6899999999988 67888999999
Q ss_pred HHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCC
Q 024752 166 SKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245 (263)
Q Consensus 166 sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~ 245 (263)
||+++++|+++++.|+++. |+||+|+||+|+|++........ ....+....|++++.+|+|++++++||+++.++
T Consensus 161 sKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~~~~----~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~ 235 (259)
T 3edm_A 161 SKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFTKPE----VRERVAGATSLKREGSSEDVAGLVAFLASDDAA 235 (259)
T ss_dssp HHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC--------------------------CCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCcccccccChH----HHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccc
Confidence 9999999999999999986 99999999999999976553211 123445567899999999999999999999999
Q ss_pred CccCcEEEeCCCcccc
Q 024752 246 YVTGQVICVDGGYSVT 261 (263)
Q Consensus 246 ~~~G~~i~~dgG~~~~ 261 (263)
++||+.|++|||+...
T Consensus 236 ~itG~~i~vdGg~~~~ 251 (259)
T 3edm_A 236 YVTGACYDINGGVLFS 251 (259)
T ss_dssp TCCSCEEEESBCSSBC
T ss_pred CccCCEEEECCCcCCC
Confidence 9999999999998753
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-50 Score=331.81 Aligned_cols=244 Identities=32% Similarity=0.468 Sum_probs=221.5
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeC-CchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-NETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
++++|+++||||++|||++++++|+++|++|++++| +++.++++.+++...+.++.++.+|++++++++++++++.+++
T Consensus 1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (246)
T 2uvd_A 1 MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVF 80 (246)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 468999999999999999999999999999999999 8888888888887767788999999999999999999999998
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.++...|++||+
T Consensus 81 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~ 159 (246)
T 2uvd_A 81 -GQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKA 159 (246)
T ss_dssp -SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHHHHH
T ss_pred -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHHHHH
Confidence 8999999999998777788899999999999999999999999999999877899999999999888889999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCcc
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~ 248 (263)
+++.++++++.|++++||+||+|+||+++|++...... ... ..+....|.+++.+|+|++++++||+++.+.+++
T Consensus 160 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~---~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~t 234 (246)
T 2uvd_A 160 GVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDE--NIK---AEMLKLIPAAQFGEAQDIANAVTFFASDQSKYIT 234 (246)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCT--THH---HHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCH--HHH---HHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCC
Confidence 99999999999999999999999999999998754321 111 2334456888999999999999999999889999
Q ss_pred CcEEEeCCCcc
Q 024752 249 GQVICVDGGYS 259 (263)
Q Consensus 249 G~~i~~dgG~~ 259 (263)
|+.|.+|||+.
T Consensus 235 G~~~~vdgG~~ 245 (246)
T 2uvd_A 235 GQTLNVDGGMV 245 (246)
T ss_dssp SCEEEESTTSC
T ss_pred CCEEEECcCcc
Confidence 99999999975
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-50 Score=333.96 Aligned_cols=250 Identities=29% Similarity=0.427 Sum_probs=216.1
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchh-HHHHHHHHHhc-CCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-LNQRIQEWKSK-GLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
+++|+++||||++|||++++++|+++|++|++++|+++. ++++.+++... +.++.++.+|++++++++++++++.+++
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 81 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM 81 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 679999999999999999999999999999999999888 88887777654 6678899999999999999999999998
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.++...|++||+
T Consensus 82 -g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 160 (260)
T 1x1t_A 82 -GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKH 160 (260)
T ss_dssp -SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHHHHH
Confidence 8999999999998777788899999999999999999999999999999877899999999999999889999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccc------hhHHHHHHh-HhcCCCCCCCChhhHHHHHHHHcC
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDS------NFLEHANRM-VLRTPMLRPGEPNEVSSVVAFLCL 241 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~~~~va~~~~~l~s 241 (263)
+++.|+++++.|++++||+||+|+||+++|++........ ...+....+ ....|.+++.+|+|++++++||++
T Consensus 161 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s 240 (260)
T 1x1t_A 161 GVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLAS 240 (260)
T ss_dssp HHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999875432110 000111222 345688999999999999999999
Q ss_pred CCCCCccCcEEEeCCCcccc
Q 024752 242 SATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 242 ~~~~~~~G~~i~~dgG~~~~ 261 (263)
+.+++++|+.|++|||++++
T Consensus 241 ~~~~~~tG~~~~vdgG~~~~ 260 (260)
T 1x1t_A 241 DAAAQITGTTVSVDGGWTAR 260 (260)
T ss_dssp GGGTTCCSCEEEESTTGGGC
T ss_pred hhhcCCCCCEEEECCCccCC
Confidence 98899999999999998753
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-50 Score=341.60 Aligned_cols=248 Identities=31% Similarity=0.333 Sum_probs=220.3
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc--hhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE--TELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
.++++||++|||||++|||++++++|+++|++|++++|+. +..+++.+++...+.++.++.+|++++++++++++++.
T Consensus 44 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 123 (294)
T 3r3s_A 44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAR 123 (294)
T ss_dssp CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 3568999999999999999999999999999999999873 44566666677777889999999999999999999999
Q ss_pred hhcCCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchh
Q 024752 86 SQFDGKLNILINNAGTFI-PKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYA 164 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~ 164 (263)
+++ +++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|.|++ +|+||++||..+..+.++...|+
T Consensus 124 ~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~Y~ 200 (294)
T 3r3s_A 124 EAL-GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK--GASIITTSSIQAYQPSPHLLDYA 200 (294)
T ss_dssp HHH-TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT--TCEEEEECCGGGTSCCTTCHHHH
T ss_pred HHc-CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECChhhccCCCCchHHH
Confidence 998 89999999999875 456788999999999999999999999999999965 58999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCC
Q 024752 165 SSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244 (263)
Q Consensus 165 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~ 244 (263)
+||+++++|+++++.|++++||+||+|+||+|+|++.......... ...+....|++++.+|+|++++++||+++.+
T Consensus 201 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~---~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~ 277 (294)
T 3r3s_A 201 ATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDK---IPQFGQQTPMKRAGQPAELAPVYVYLASQES 277 (294)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGG---STTTTTTSTTSSCBCGGGGHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHH---HHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence 9999999999999999999999999999999999984332222211 1344556789999999999999999999999
Q ss_pred CCccCcEEEeCCCcccc
Q 024752 245 SYVTGQVICVDGGYSVT 261 (263)
Q Consensus 245 ~~~~G~~i~~dgG~~~~ 261 (263)
+++||+.|++|||+++.
T Consensus 278 ~~itG~~i~vdGG~~l~ 294 (294)
T 3r3s_A 278 SYVTAEVHGVCGGEHLG 294 (294)
T ss_dssp TTCCSCEEEESTTCCCC
T ss_pred cCCCCCEEEECCCccCc
Confidence 99999999999999863
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-50 Score=337.98 Aligned_cols=249 Identities=27% Similarity=0.393 Sum_probs=214.6
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCC------------chhHHHHHHHHHhcCCceEEEeccCCC
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN------------ETELNQRIQEWKSKGLQVSGSVCDLKI 73 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~D~~~ 73 (263)
.+..+++||++|||||++|||++++++|+++|++|++++|+ .+.+++..+++...+.++.++.+|+++
T Consensus 6 ~~~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 85 (278)
T 3sx2_A 6 SSEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRD 85 (278)
T ss_dssp ---CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTC
T ss_pred CCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCC
Confidence 34567999999999999999999999999999999999987 677777777777778889999999999
Q ss_pred HHHHHHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEcccc
Q 024752 74 RAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVA 152 (263)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~ 152 (263)
+++++++++++.+++ +++|+||||||+..... +.++|++.+++|+.++++++++++|.|.+++ .|+||++||..
T Consensus 86 ~~~v~~~~~~~~~~~-g~id~lv~nAg~~~~~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~ 160 (278)
T 3sx2_A 86 RESLSAALQAGLDEL-GRLDIVVANAGIAPMSA----GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSA 160 (278)
T ss_dssp HHHHHHHHHHHHHHH-CCCCEEEECCCCCCCSS----THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGG
T ss_pred HHHHHHHHHHHHHHc-CCCCEEEECCCCCCCCC----CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHH
Confidence 999999999999998 89999999999876544 6899999999999999999999999998864 78999999999
Q ss_pred ccccC----CCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHH------HHhHhcCC
Q 024752 153 GVIAI----PMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHA------NRMVLRTP 222 (263)
Q Consensus 153 ~~~~~----~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~------~~~~~~~~ 222 (263)
+..+. ++...|++||+++++|+++++.|++++||+||+|+||+|+|++.............. ..+....|
T Consensus 161 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 240 (278)
T 3sx2_A 161 GLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP 240 (278)
T ss_dssp GTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS
T ss_pred hcCCCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcC
Confidence 98776 667789999999999999999999999999999999999999976432221111100 11222345
Q ss_pred CCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCccc
Q 024752 223 MLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 223 ~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
+++.+|+|+|++++||+++.++++|||.|++|||+.+
T Consensus 241 -~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~~ 277 (278)
T 3sx2_A 241 -VEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFLN 277 (278)
T ss_dssp -CSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred -cCcCCHHHHHHHHHHHhCcccccccCCEEeECCCccc
Confidence 7788999999999999999999999999999999875
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-49 Score=335.02 Aligned_cols=249 Identities=31% Similarity=0.453 Sum_probs=222.7
Q ss_pred ccccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHH
Q 024752 5 REQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 5 ~~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 84 (263)
+.+.|++++|+++||||++|||++++++|+++|++|++++|+++.+++..+++...+ ++.++.+|++++++++++++++
T Consensus 21 ~~~~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~ 99 (276)
T 2b4q_A 21 MHPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQAL 99 (276)
T ss_dssp CCTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHH
T ss_pred cccccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHH
Confidence 344567999999999999999999999999999999999999998888888876544 7888999999999999999999
Q ss_pred HhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCC----ceEEEEccccccccCCCC
Q 024752 85 SSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGN----GNIIFISSVAGVIAIPMC 160 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~----~~iv~vsS~~~~~~~~~~ 160 (263)
.+.+ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++. ++||++||..+..+.++.
T Consensus 100 ~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~ 178 (276)
T 2b4q_A 100 GELS-ARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQ 178 (276)
T ss_dssp HHHC-SCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCS
T ss_pred HHhc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCC
Confidence 9998 89999999999988778888999999999999999999999999999987665 899999999999888888
Q ss_pred c-chhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHh--cCCCCCCCChhhHHHHHH
Q 024752 161 S-IYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVL--RTPMLRPGEPNEVSSVVA 237 (263)
Q Consensus 161 ~-~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~va~~~~ 237 (263)
. .|++||++++.|+++++.|++++||+||+|+||+++|++....... .. ..+.. ..|++++.+|+|+|++++
T Consensus 179 ~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~---~~~~~~~~~p~~r~~~p~dvA~~v~ 253 (276)
T 2b4q_A 179 AYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIAND--PQ---ALEADSASIPMGRWGRPEEMAALAI 253 (276)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHC--HH---HHHHHHHTSTTSSCCCHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchh--HH---HHHHhhcCCCCCCcCCHHHHHHHHH
Confidence 8 9999999999999999999999999999999999999987543221 11 22223 568899999999999999
Q ss_pred HHcCCCCCCccCcEEEeCCCccc
Q 024752 238 FLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 238 ~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
||+++.+.+++|+.|.+|||+.+
T Consensus 254 ~l~s~~~~~~tG~~i~vdGG~~L 276 (276)
T 2b4q_A 254 SLAGTAGAYMTGNVIPIDGGFHL 276 (276)
T ss_dssp HHHSGGGTTCCSCEEEESTTTTC
T ss_pred HHhCccccCCCCCEEEeCCCccC
Confidence 99999889999999999999864
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-50 Score=340.16 Aligned_cols=247 Identities=32% Similarity=0.425 Sum_probs=221.6
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchh-HHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-LNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
.+++||++|||||++|||++++++|+++|++|++++|+.+. .+...+.+...+.++.++.+|++|+++++++++++.++
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999875 44455556666778999999999999999999999999
Q ss_pred cCCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhH
Q 024752 88 FDGKLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASS 166 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s 166 (263)
+ +++|+||||||+... .++.+.+.++|++.+++|+.++++++++++|.|++ .++||++||..+..+.++...|++|
T Consensus 123 ~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~as 199 (291)
T 3ijr_A 123 L-GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ--GDVIINTASIVAYEGNETLIDYSAT 199 (291)
T ss_dssp H-SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT--TCEEEEECCTHHHHCCTTCHHHHHH
T ss_pred c-CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCEEEEEechHhcCCCCCChhHHHH
Confidence 8 899999999998754 56778899999999999999999999999999965 5799999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
|+++++|+++++.|++++||+||+|+||+|+|++....... +....+....|++++.+|+|++++++||+++.+++
T Consensus 200 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~----~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~ 275 (291)
T 3ijr_A 200 KGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDE----KKVSQFGSNVPMQRPGQPYELAPAYVYLASSDSSY 275 (291)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCH----HHHHHTTTTSTTSSCBCGGGTHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCH----HHHHHHHccCCCCCCcCHHHHHHHHHHHhCCccCC
Confidence 99999999999999999999999999999999987543321 12244556789999999999999999999999999
Q ss_pred ccCcEEEeCCCccccC
Q 024752 247 VTGQVICVDGGYSVTG 262 (263)
Q Consensus 247 ~~G~~i~~dgG~~~~~ 262 (263)
+||+.|++|||+.+.|
T Consensus 276 itG~~i~vdGG~~~~g 291 (291)
T 3ijr_A 276 VTGQMIHVNGGVIVNG 291 (291)
T ss_dssp CCSCEEEESSSCCCCC
T ss_pred CcCCEEEECCCcccCC
Confidence 9999999999999876
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-49 Score=335.52 Aligned_cols=249 Identities=27% Similarity=0.385 Sum_probs=214.9
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
|++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++ +.++.++.+|++++++++++++++.+++
T Consensus 1 M~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 77 (281)
T 3zv4_A 1 MKLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH---GGNAVGVVGDVRSLQDQKRAAERCLAAF 77 (281)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---BTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc---CCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 5789999999999999999999999999999999999998877766543 5678999999999999999999999998
Q ss_pred CCCccEEEeCCCCCCCC-CC----CCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcch
Q 024752 89 DGKLNILINNAGTFIPK-ET----TEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIY 163 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~-~~----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y 163 (263)
+++|+||||||+.... ++ .+.+.++|++.+++|+.++++++++++|.|.+++ |+||++||..+..+.++...|
T Consensus 78 -g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y 155 (281)
T 3zv4_A 78 -GKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR-GSVVFTISNAGFYPNGGGPLY 155 (281)
T ss_dssp -SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSSSSSCHHH
T ss_pred -CCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CeEEEEecchhccCCCCCchh
Confidence 8999999999986542 22 2455688999999999999999999999998764 899999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccc---hh--HHHHHHhHhcCCCCCCCChhhHHHHHHH
Q 024752 164 ASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDS---NF--LEHANRMVLRTPMLRPGEPNEVSSVVAF 238 (263)
Q Consensus 164 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~va~~~~~ 238 (263)
++||+++++|+++++.|+++. |+||+|+||+|+|++........ .. ......+....|++++++|+|++++++|
T Consensus 156 ~asKaa~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~f 234 (281)
T 3zv4_A 156 TATKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVF 234 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGGGGSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 999999999999999999987 99999999999999875421110 00 0122445567899999999999999999
Q ss_pred HcC-CCCCCccCcEEEeCCCccccCC
Q 024752 239 LCL-SATSYVTGQVICVDGGYSVTGF 263 (263)
Q Consensus 239 l~s-~~~~~~~G~~i~~dgG~~~~~~ 263 (263)
|++ +.+.++|||.|.+|||++++|+
T Consensus 235 L~s~~~~~~itG~~i~vdGG~~~~~~ 260 (281)
T 3zv4_A 235 FATRGDSLPATGALLNYDGGMGVRGF 260 (281)
T ss_dssp HHSTTTSTTCSSCEEEESSSGGGCCS
T ss_pred hhcccccccccCcEEEECCCCccccc
Confidence 999 7888999999999999998874
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-50 Score=334.41 Aligned_cols=242 Identities=26% Similarity=0.358 Sum_probs=201.4
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
|++++|++|||||++|||++++++|+++|++|++++|+++..++..+++ +.++.++.+|++++++++++++++.+++
T Consensus 3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 79 (257)
T 3tpc_A 3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL---GAAVRFRNADVTNEADATAALAFAKQEF 79 (257)
T ss_dssp -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC---------------CEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 6789999999999999999999999999999999999999888777665 4568899999999999999999999998
Q ss_pred CCCccEEEeCCCCCCCCCCC----CCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC------CCceEEEEccccccccCC
Q 024752 89 DGKLNILINNAGTFIPKETT----EFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA------GNGNIIFISSVAGVIAIP 158 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~----~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~~~iv~vsS~~~~~~~~ 158 (263)
+++|+||||||+....++. +.+.++|++.+++|+.++++++++++|.|+++ +.|+||++||..+..+.+
T Consensus 80 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~ 158 (257)
T 3tpc_A 80 -GHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQI 158 (257)
T ss_dssp -SCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT
T ss_pred -CCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCC
Confidence 8999999999998665432 67899999999999999999999999999884 578999999999999999
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCC-CCCCChhhHHHHHH
Q 024752 159 MCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPM-LRPGEPNEVSSVVA 237 (263)
Q Consensus 159 ~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~ 237 (263)
+...|++||++++.|+++++.|++++||+||+|+||+|+|++....... ....+....|. +++.+|+|+++++.
T Consensus 159 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~-----~~~~~~~~~p~~~r~~~~~dva~~v~ 233 (257)
T 3tpc_A 159 GQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQD-----VQDALAASVPFPPRLGRAEEYAALVK 233 (257)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC-------------------CCSSSSCSCBCHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHH-----HHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999997654321 11334456677 89999999999999
Q ss_pred HHcCCCCCCccCcEEEeCCCcccc
Q 024752 238 FLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 238 ~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
||+++ +++|||.|.+|||++++
T Consensus 234 ~l~s~--~~itG~~i~vdGG~~~~ 255 (257)
T 3tpc_A 234 HICEN--TMLNGEVIRLDGALRMA 255 (257)
T ss_dssp HHHHC--TTCCSCEEEESTTCCC-
T ss_pred HHccc--CCcCCcEEEECCCccCC
Confidence 99985 78999999999999864
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-49 Score=331.85 Aligned_cols=252 Identities=32% Similarity=0.497 Sum_probs=223.5
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
....++++|+++||||++|||++++++|+++|++|++++|+++.+++..+++...+.++.++.+|++++++++++++++.
T Consensus 7 ~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 86 (260)
T 2zat_A 7 ERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAV 86 (260)
T ss_dssp ---CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHH
Confidence 34456899999999999999999999999999999999999998888888887777788999999999999999999999
Q ss_pred hhcCCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchh
Q 024752 86 SQFDGKLNILINNAGTFI-PKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYA 164 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~ 164 (263)
+.+ +++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.++...|+
T Consensus 87 ~~~-g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~ 165 (260)
T 2zat_A 87 NLH-GGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYN 165 (260)
T ss_dssp HHH-SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHH
T ss_pred HHc-CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhHH
Confidence 998 89999999999864 3567788999999999999999999999999999988889999999999999988999999
Q ss_pred hHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCC
Q 024752 165 SSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244 (263)
Q Consensus 165 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~ 244 (263)
++|++++.|+++++.|++++||+||+|+||+++|++.......... ...+....|.+++.+|+|+++++.||+++.+
T Consensus 166 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~ 242 (260)
T 2zat_A 166 VSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKAR---KEYMKESLRIRRLGNPEDCAGIVSFLCSEDA 242 (260)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHH---HHHHHHHHTCSSCBCGGGGHHHHHHHTSGGG
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHH---HHHHHhcCCCCCCCCHHHHHHHHHHHcCccc
Confidence 9999999999999999999999999999999999987543222111 1223345688899999999999999999988
Q ss_pred CCccCcEEEeCCCcccc
Q 024752 245 SYVTGQVICVDGGYSVT 261 (263)
Q Consensus 245 ~~~~G~~i~~dgG~~~~ 261 (263)
.+++|+.|++|||+..+
T Consensus 243 ~~~tG~~~~vdgG~~~s 259 (260)
T 2zat_A 243 SYITGETVVVGGGTASR 259 (260)
T ss_dssp TTCCSCEEEESTTCCCC
T ss_pred CCccCCEEEECCCcccc
Confidence 99999999999998765
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-50 Score=334.13 Aligned_cols=247 Identities=30% Similarity=0.420 Sum_probs=221.4
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
++++|+++||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++.+|++++++++++++++.+.+
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 82 (262)
T 1zem_A 4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF- 82 (262)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-
Confidence 5789999999999999999999999999999999999999888888887777789999999999999999999999998
Q ss_pred CCccEEEeCCCCC-CCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 90 GKLNILINNAGTF-IPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 90 ~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|++||+
T Consensus 83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~ 162 (262)
T 1zem_A 83 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKG 162 (262)
T ss_dssp SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchHHHHHH
Confidence 8999999999987 566778889999999999999999999999999999877899999999999999889999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccc----------cchhHH-HHHHhHhcCCCCCCCChhhHHHHHH
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEK----------DSNFLE-HANRMVLRTPMLRPGEPNEVSSVVA 237 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~----------~~~~~~-~~~~~~~~~~~~~~~~~~~va~~~~ 237 (263)
+++.|+++++.|++++||+||+|+||+++|++...... .....+ ....+....|++++.+|+|+|++++
T Consensus 163 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~ 242 (262)
T 1zem_A 163 AIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVA 242 (262)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHH
T ss_pred HHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 99999999999999999999999999999998654200 000011 1233445678999999999999999
Q ss_pred HHcCCCCCCccCcEEEeCCC
Q 024752 238 FLCLSATSYVTGQVICVDGG 257 (263)
Q Consensus 238 ~l~s~~~~~~~G~~i~~dgG 257 (263)
||+++.++++||+.|.+|||
T Consensus 243 ~l~s~~~~~itG~~i~vdGG 262 (262)
T 1zem_A 243 FLLGDDSSFMTGVNLPIAGG 262 (262)
T ss_dssp HHHSGGGTTCCSCEEEESCC
T ss_pred HHcCchhcCcCCcEEecCCC
Confidence 99999999999999999998
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-49 Score=331.66 Aligned_cols=248 Identities=27% Similarity=0.370 Sum_probs=217.5
Q ss_pred ccCCCCCCEEEEecCC-CchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcC-CceEEEeccCCCHHHHHHHHHHH
Q 024752 7 QRWSLKGMTALVTGGT-KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG-LQVSGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas-~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~ 84 (263)
...++++|++|||||+ +|||++++++|+++|++|++++|+.+.+++..+++.+.+ .++.++.+|++++++++++++++
T Consensus 16 ~~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 95 (266)
T 3o38_A 16 GHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQT 95 (266)
T ss_dssp CCSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred cccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHH
Confidence 3456899999999998 599999999999999999999999999999998887653 57999999999999999999999
Q ss_pred HhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-CCceEEEEccccccccCCCCcch
Q 024752 85 SSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-GNGNIIFISSVAGVIAIPMCSIY 163 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~~~~~~~~~~Y 163 (263)
.+++ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|+++ +.++||++||..+..+.++...|
T Consensus 96 ~~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y 174 (266)
T 3o38_A 96 VEKA-GRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHY 174 (266)
T ss_dssp HHHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCHHH
T ss_pred HHHh-CCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCchH
Confidence 9998 899999999999888888889999999999999999999999999999986 67899999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 164 ASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 164 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
+++|++++.|+++++.|++++||+||+|+||+++|++........ ....+....|.+++.+|+|++++++||+++.
T Consensus 175 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~----~~~~~~~~~~~~r~~~~~dva~~i~~l~s~~ 250 (266)
T 3o38_A 175 AAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSE----LLDRLASDEAFGRAAEPWEVAATIAFLASDY 250 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC---------------------CCTTSSCCCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHH----HHHHHHhcCCcCCCCCHHHHHHHHHHHcCcc
Confidence 999999999999999999999999999999999999876543321 1244455678899999999999999999999
Q ss_pred CCCccCcEEEeCCCcc
Q 024752 244 TSYVTGQVICVDGGYS 259 (263)
Q Consensus 244 ~~~~~G~~i~~dgG~~ 259 (263)
+.++|||.|++|||++
T Consensus 251 ~~~~tG~~i~vdgG~~ 266 (266)
T 3o38_A 251 SSYMTGEVVSVSSQRA 266 (266)
T ss_dssp GTTCCSCEEEESSCCC
T ss_pred ccCccCCEEEEcCCcC
Confidence 9999999999999974
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-50 Score=332.46 Aligned_cols=248 Identities=29% Similarity=0.407 Sum_probs=221.2
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchh--HHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE--LNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
+|+++||||++|||++++++|+++|++|++++|+.+. +++..+++...+.++.++.+|++++++++++++++.+++ +
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g 80 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKL-G 80 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-T
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence 7999999999999999999999999999999999888 788888887767789999999999999999999999998 8
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCC-ceEEEEccccccccCCCCcchhhHHHH
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGN-GNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++. ++||++||..+..+.++...|++||++
T Consensus 81 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a 160 (258)
T 3a28_C 81 GFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFA 160 (258)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHHHHH
Confidence 9999999999987778888999999999999999999999999999988766 899999999999998999999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEEecCcccCCccccccc------cchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 170 MNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEK------DSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
++.|+++++.|++++||+||+|+||+++|++...... .....+....+....|++++.+|+|++++++||+++.
T Consensus 161 ~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~ 240 (258)
T 3a28_C 161 VRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLASEN 240 (258)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCcc
Confidence 9999999999999999999999999999998654210 0100111233445578899999999999999999999
Q ss_pred CCCccCcEEEeCCCcccc
Q 024752 244 TSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 244 ~~~~~G~~i~~dgG~~~~ 261 (263)
+++++|+.|.+|||+.++
T Consensus 241 ~~~~tG~~i~vdGG~~~~ 258 (258)
T 3a28_C 241 SNYVTGQVMLVDGGMLYN 258 (258)
T ss_dssp GTTCCSCEEEESSSSCCC
T ss_pred cCCCCCCEEEECCCEecC
Confidence 999999999999998764
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-49 Score=333.77 Aligned_cols=247 Identities=29% Similarity=0.437 Sum_probs=221.6
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEee-CCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCS-RNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
.+++|+++||||++|||++++++|+++|++|++++ |+.+..++..+++...+.++.++.+|++++++++++++++.+.+
T Consensus 22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 101 (269)
T 3gk3_A 22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF 101 (269)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 47899999999999999999999999999999998 66666777777777777889999999999999999999999998
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|++||+
T Consensus 102 -g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 180 (269)
T 3gk3_A 102 -GKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKA 180 (269)
T ss_dssp -SCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHH
T ss_pred -CCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcchHHHHHH
Confidence 8999999999998888888999999999999999999999999999999888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCcc
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~ 248 (263)
|++.|+++++.|++++||+||+|+||+++|++......... ...+....|.+++.+|+|++++++||+++.+.++|
T Consensus 181 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~----~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~it 256 (269)
T 3gk3_A 181 GIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVL----EAKILPQIPVGRLGRPDEVAALIAFLCSDDAGFVT 256 (269)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-----------CCSGGGCTTSSCBCHHHHHHHHHHHTSTTCTTCC
T ss_pred HHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhHH----HHHhhhcCCcCCccCHHHHHHHHHHHhCCCcCCee
Confidence 99999999999999999999999999999999865432211 12345567889999999999999999999999999
Q ss_pred CcEEEeCCCcccc
Q 024752 249 GQVICVDGGYSVT 261 (263)
Q Consensus 249 G~~i~~dgG~~~~ 261 (263)
||.|++|||++++
T Consensus 257 G~~i~vdgG~~~s 269 (269)
T 3gk3_A 257 GADLAINGGMHMS 269 (269)
T ss_dssp SCEEEESTTSCCC
T ss_pred CcEEEECCCEeCc
Confidence 9999999999874
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-49 Score=335.04 Aligned_cols=245 Identities=29% Similarity=0.340 Sum_probs=219.4
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEee-CCchhHHHHHHHHH-hcCCceEEEeccCCCHH-----------
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCS-RNETELNQRIQEWK-SKGLQVSGSVCDLKIRA----------- 75 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~-r~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~----------- 75 (263)
+++++|++|||||++|||++++++|+++|++|++++ |+.+.++++.+++. ..+.++.++++|+++++
T Consensus 5 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 84 (291)
T 1e7w_A 5 TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSA 84 (291)
T ss_dssp ---CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CC
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccccc
Confidence 358899999999999999999999999999999999 99999888888886 55678999999999999
Q ss_pred ------HHHHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCC--------------HHHHHHHHHhhhHhHHHHHHHHhH
Q 024752 76 ------QREKLMETVSSQFDGKLNILINNAGTFIPKETTEFT--------------EEDFSTVMTTNFESAYHLSQLAHP 135 (263)
Q Consensus 76 ------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~~~~~~~~ 135 (263)
++.++++++.+++ +++|+||||||+....++.+.+ .++|++.+++|+.++++++++++|
T Consensus 85 ~~~~~~~v~~~~~~~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 163 (291)
T 1e7w_A 85 PVTLFTRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAH 163 (291)
T ss_dssp CBCHHHHHHHHHHHHHHHH-SCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHhc-CCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 9999999999998 8999999999998777788888 999999999999999999999999
Q ss_pred HHhhCC------CceEEEEccccccccCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccch
Q 024752 136 LLKSAG------NGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSN 209 (263)
Q Consensus 136 ~~~~~~------~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~ 209 (263)
.|++++ .++||++||..+..+.++...|++||++++.|+++++.|++++||+||+|+||+|+|++ . . . +.
T Consensus 164 ~m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~-~-~-~~ 239 (291)
T 1e7w_A 164 RVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-M-P-PA 239 (291)
T ss_dssp HHHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G-S-C-HH
T ss_pred HHHhcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c-C-C-HH
Confidence 998876 69999999999999999999999999999999999999999999999999999999998 4 2 1 11
Q ss_pred hHHHHHHhHhcCCCC-CCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 210 FLEHANRMVLRTPML-RPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 210 ~~~~~~~~~~~~~~~-~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
....+....|++ ++.+|+|++++++||+++.+.++||+.|.+|||+.++
T Consensus 240 ---~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~ 289 (291)
T 1e7w_A 240 ---VWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT 289 (291)
T ss_dssp ---HHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred ---HHHHHHhhCCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCcccc
Confidence 123344567888 8999999999999999999999999999999999865
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-49 Score=330.46 Aligned_cols=239 Identities=25% Similarity=0.313 Sum_probs=213.9
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc-CCceEEEeccC--CCHHHHHHHHHHH
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGSVCDL--KIRAQREKLMETV 84 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~--~~~~~~~~~~~~~ 84 (263)
...+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +.++.++.+|+ +++++++++++++
T Consensus 7 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (252)
T 3f1l_A 7 QDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRI 86 (252)
T ss_dssp TTTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred ccccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHH
Confidence 45689999999999999999999999999999999999999999988888764 33788999999 9999999999999
Q ss_pred HhhcCCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcch
Q 024752 85 SSQFDGKLNILINNAGTFI-PKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIY 163 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y 163 (263)
.+++ +++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|
T Consensus 87 ~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y 165 (252)
T 3f1l_A 87 AVNY-PRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAY 165 (252)
T ss_dssp HHHC-SCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTCHHH
T ss_pred HHhC-CCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCCchh
Confidence 9998 89999999999864 467888999999999999999999999999999999888999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 164 ASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 164 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
++||+++++|+++++.|+++. |+||+|+||+++|++........ +..++.+|+|++++++||+++.
T Consensus 166 ~asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~~~~~-------------~~~~~~~p~dva~~~~~L~s~~ 231 (252)
T 3f1l_A 166 AASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAFPTE-------------DPQKLKTPADIMPLYLWLMGDD 231 (252)
T ss_dssp HHHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHHCTTC-------------CGGGSBCTGGGHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhhCCcc-------------chhccCCHHHHHHHHHHHcCcc
Confidence 999999999999999999987 99999999999999865432211 2234678999999999999999
Q ss_pred CCCccCcEEEeCCCcccc
Q 024752 244 TSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 244 ~~~~~G~~i~~dgG~~~~ 261 (263)
++++||+.|.+|||+...
T Consensus 232 ~~~itG~~i~vdgG~~~~ 249 (252)
T 3f1l_A 232 SRRKTGMTFDAQPGRKPG 249 (252)
T ss_dssp GTTCCSCEEESSCC----
T ss_pred ccCCCCCEEEeCCCcCCC
Confidence 999999999999998653
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-50 Score=333.86 Aligned_cols=245 Identities=31% Similarity=0.452 Sum_probs=216.4
Q ss_pred ccccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHH
Q 024752 5 REQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 5 ~~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 84 (263)
..+..++++|++|||||++|||++++++|+++|++|++++|+.+.. ...+..+.+|++++++++++++++
T Consensus 6 ~~~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~ 75 (269)
T 3vtz_A 6 HHHMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD----------VNVSDHFKIDVTNEEEVKEAVEKT 75 (269)
T ss_dssp ----CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C----------TTSSEEEECCTTCHHHHHHHHHHH
T ss_pred cccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc----------cCceeEEEecCCCHHHHHHHHHHH
Confidence 4567789999999999999999999999999999999999987643 124678899999999999999999
Q ss_pred HhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchh
Q 024752 85 SSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYA 164 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~ 164 (263)
.+.+ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|+
T Consensus 76 ~~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~ 154 (269)
T 3vtz_A 76 TKKY-GRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYV 154 (269)
T ss_dssp HHHH-SCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHH
T ss_pred HHHc-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhHH
Confidence 9998 899999999999888888889999999999999999999999999999988889999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccc------cchhHHHHHHhHhcCCCCCCCChhhHHHHHHH
Q 024752 165 SSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEK------DSNFLEHANRMVLRTPMLRPGEPNEVSSVVAF 238 (263)
Q Consensus 165 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ 238 (263)
+||+++++|+++++.|+++ ||+||+|+||+|+|++...... .....+....+....|++++.+|+|++++++|
T Consensus 155 asKaa~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~ 233 (269)
T 3vtz_A 155 TSKHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAF 233 (269)
T ss_dssp HHHHHHHHHHHHHHHHHTT-TEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcC-CCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 9999999999999999998 9999999999999998754321 11112334555667899999999999999999
Q ss_pred HcCCCCCCccCcEEEeCCCcccc
Q 024752 239 LCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 239 l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
|+++.+.++||+.|++|||+...
T Consensus 234 L~s~~~~~itG~~i~vdGG~~~~ 256 (269)
T 3vtz_A 234 LASDRSSFITGACLTVDGGLLSK 256 (269)
T ss_dssp HHSGGGTTCCSCEEEESTTGGGB
T ss_pred HhCCccCCCcCcEEEECCCcccc
Confidence 99999999999999999998764
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-49 Score=329.17 Aligned_cols=247 Identities=28% Similarity=0.372 Sum_probs=220.7
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
+|+++||||++|||++++++|+++|++|++++|+++.++++.+++...+.++.++.+|++++++++++++++.+++ +++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~i 80 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL-GGF 80 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT-TCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-CCC
Confidence 6899999999999999999999999999999999998888888887767788999999999999999999999998 899
Q ss_pred cEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccccccCCCCcchhhHHHHHH
Q 024752 93 NILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVIAIPMCSIYASSKVAMN 171 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~ 171 (263)
|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++ .++||++||..+..+.++...|++||++++
T Consensus 81 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~ 160 (256)
T 1geg_A 81 DVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVR 160 (256)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHHHHH
Confidence 9999999998777788889999999999999999999999999999876 789999999999999889999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEEecCcccCCcccccccc--c----hhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCC
Q 024752 172 QLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKD--S----NFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245 (263)
Q Consensus 172 ~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~ 245 (263)
.++++++.|++++||+||+|+||+++|++....... . ........+....|++++.+|+|+|++++||+++.+.
T Consensus 161 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~ 240 (256)
T 1geg_A 161 GLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSD 240 (256)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence 999999999999999999999999999986543100 0 0011113344457889999999999999999999889
Q ss_pred CccCcEEEeCCCccc
Q 024752 246 YVTGQVICVDGGYSV 260 (263)
Q Consensus 246 ~~~G~~i~~dgG~~~ 260 (263)
+++|+.|.+|||+++
T Consensus 241 ~~tG~~i~vdGG~~~ 255 (256)
T 1geg_A 241 YMTGQSLLIDGGMVF 255 (256)
T ss_dssp TCCSCEEEESSSSSC
T ss_pred CCCCCEEEeCCCccC
Confidence 999999999999875
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-49 Score=327.16 Aligned_cols=244 Identities=30% Similarity=0.435 Sum_probs=208.8
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc-hhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE-TELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
.++++|+++||||++|||++++++|+++|++|++++|++ +.+++ ++.+.+.++.++.+|++++++++++++++.++
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (249)
T 2ew8_A 3 QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNLGRRVLTVKCDVSQPGDVEAFGKQVIST 79 (249)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhcCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence 357899999999999999999999999999999999998 66554 34445667899999999999999999999999
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.++...|++||
T Consensus 80 ~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 158 (249)
T 2ew8_A 80 F-GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTK 158 (249)
T ss_dssp H-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHH
T ss_pred c-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCchhHHHHH
Confidence 8 899999999999877778889999999999999999999999999999988789999999999999989999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccc-cccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLD-TVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
++++.++++++.|++++||+||+|+||+++|++.. ..... ..+....+. .|.+++.+|+|++++++||+++.+++
T Consensus 159 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~--~~~~~~~~~--~~~~~~~~p~dva~~~~~l~s~~~~~ 234 (249)
T 2ew8_A 159 AANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSA--MFDVLPNML--QAIPRLQVPLDLTGAAAFLASDDASF 234 (249)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCC--------------------CTT--SSSCSCCCTHHHHHHHHHHTSGGGTT
T ss_pred HHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccc--hhhHHHHhh--CccCCCCCHHHHHHHHHHHcCcccCC
Confidence 99999999999999999999999999999999865 32211 000011111 57888999999999999999998899
Q ss_pred ccCcEEEeCCCccc
Q 024752 247 VTGQVICVDGGYSV 260 (263)
Q Consensus 247 ~~G~~i~~dgG~~~ 260 (263)
++|+.|.+|||++.
T Consensus 235 ~tG~~~~vdGG~~~ 248 (249)
T 2ew8_A 235 ITGQTLAVDGGMVR 248 (249)
T ss_dssp CCSCEEEESSSCCC
T ss_pred CCCcEEEECCCccC
Confidence 99999999999865
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-50 Score=331.75 Aligned_cols=248 Identities=26% Similarity=0.365 Sum_probs=187.4
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
..|++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++.+|++++++++++++++.+
T Consensus 3 ~~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (253)
T 3qiv_A 3 GSMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLA 82 (253)
T ss_dssp --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred cccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 35789999999999999999999999999999999999999999999999988888899999999999999999999999
Q ss_pred hcCCCccEEEeCCCCC---CCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcch
Q 024752 87 QFDGKLNILINNAGTF---IPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIY 163 (263)
Q Consensus 87 ~~~~~id~li~~ag~~---~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y 163 (263)
.+ +++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+. ++...|
T Consensus 83 ~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~---~~~~~Y 158 (253)
T 3qiv_A 83 EF-GGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW---LYSNYY 158 (253)
T ss_dssp HH-SCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC-------------
T ss_pred Hc-CCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc---CCCchh
Confidence 98 8999999999984 3345678899999999999999999999999999999888999999999876 456789
Q ss_pred hhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 164 ASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 164 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
++||++++.|+++++.|++++||+|++|+||+++|++........ .........|.+++.+|+|++++++||+++.
T Consensus 159 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~ 234 (253)
T 3qiv_A 159 GLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKE----MVDDIVKGLPLSRMGTPDDLVGMCLFLLSDE 234 (253)
T ss_dssp -CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-----------------------------------CCHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHH----HHHHHhccCCCCCCCCHHHHHHHHHHHcCcc
Confidence 999999999999999999999999999999999999876543221 1234455678889999999999999999999
Q ss_pred CCCccCcEEEeCCCccccC
Q 024752 244 TSYVTGQVICVDGGYSVTG 262 (263)
Q Consensus 244 ~~~~~G~~i~~dgG~~~~~ 262 (263)
.++++|+.|++|||+.+++
T Consensus 235 ~~~~tG~~~~vdgG~~~~~ 253 (253)
T 3qiv_A 235 ASWITGQIFNVDGGQIIRS 253 (253)
T ss_dssp GTTCCSCEEEC--------
T ss_pred ccCCCCCEEEECCCeecCC
Confidence 9999999999999998763
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-49 Score=332.59 Aligned_cols=250 Identities=30% Similarity=0.477 Sum_probs=223.7
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++.+.+.++.++.+|++++++++++++++.+.+
T Consensus 19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~- 97 (277)
T 2rhc_B 19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY- 97 (277)
T ss_dssp CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT-
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHh-
Confidence 6899999999999999999999999999999999999999888888887777788999999999999999999999998
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHH--HhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPL--LKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~--~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+++|+||||||+....++.+.+.++|++.+++|+.++++++++++|. |++++.++||++||..+..+.++...|+++|
T Consensus 98 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 177 (277)
T 2rhc_B 98 GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASK 177 (277)
T ss_dssp CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCCccHHHHH
Confidence 89999999999987777888999999999999999999999999999 9887779999999999999988999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccccc--c----hhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcC
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKD--S----NFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCL 241 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s 241 (263)
++++.++++++.|++++||+||+|+||+++|++....... . ...+....+....|.+++.+|+|+|++++||++
T Consensus 178 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s 257 (277)
T 2rhc_B 178 HGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIG 257 (277)
T ss_dssp HHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999986543210 0 001112334455788999999999999999999
Q ss_pred CCCCCccCcEEEeCCCccc
Q 024752 242 SATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 242 ~~~~~~~G~~i~~dgG~~~ 260 (263)
+.+++++|+.|++|||+..
T Consensus 258 ~~~~~~tG~~~~vdGG~~~ 276 (277)
T 2rhc_B 258 PGAAAVTAQALNVCGGLGN 276 (277)
T ss_dssp GGGTTCCSCEEEESTTCCC
T ss_pred chhcCCCCcEEEECCCccc
Confidence 9889999999999999763
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-49 Score=335.83 Aligned_cols=243 Identities=22% Similarity=0.269 Sum_probs=219.7
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCch-------hHHHHHHHHHhcCCceEEEeccCCCHHHHHH
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET-------ELNQRIQEWKSKGLQVSGSVCDLKIRAQREK 79 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 79 (263)
..|++++|++|||||++|||++++++|+++|++|++++|+.+ .+++..+++...+.++.++.+|+++++++++
T Consensus 3 ~~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 82 (285)
T 3sc4_A 3 GSMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAA 82 (285)
T ss_dssp ---CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHH
T ss_pred CCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence 357899999999999999999999999999999999999987 5677778887778889999999999999999
Q ss_pred HHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC-C
Q 024752 80 LMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI-P 158 (263)
Q Consensus 80 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-~ 158 (263)
+++++.+++ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+. +
T Consensus 83 ~~~~~~~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~ 161 (285)
T 3sc4_A 83 AVAKTVEQF-GGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWL 161 (285)
T ss_dssp HHHHHHHHH-SCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGS
T ss_pred HHHHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCC
Confidence 999999998 89999999999998888999999999999999999999999999999999888999999999988876 7
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecC-cccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHH
Q 024752 159 MCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPW-VIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVA 237 (263)
Q Consensus 159 ~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~ 237 (263)
+...|++||+++++|+++++.|++++||+||+|+|| .+.|++...... ...|.+++.+|+|++++++
T Consensus 162 ~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~~~------------~~~~~~r~~~pedvA~~~~ 229 (285)
T 3sc4_A 162 RPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNLLG------------GDEAMARSRKPEVYADAAY 229 (285)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHHHT------------SCCCCTTCBCTHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhhcc------------ccccccCCCCHHHHHHHHH
Confidence 789999999999999999999999999999999999 688887643321 2346788899999999999
Q ss_pred HHcCCCCCCccCcEEEeCCCccccCC
Q 024752 238 FLCLSATSYVTGQVICVDGGYSVTGF 263 (263)
Q Consensus 238 ~l~s~~~~~~~G~~i~~dgG~~~~~~ 263 (263)
||+++.+ ++|||.|.+|||+...|+
T Consensus 230 ~l~s~~~-~~tG~~i~~dgg~~~~g~ 254 (285)
T 3sc4_A 230 VVLNKPS-SYTGNTLLCEDVLLESGV 254 (285)
T ss_dssp HHHTSCT-TCCSCEEEHHHHHHHHTC
T ss_pred HHhCCcc-cccceEEEEcCchhccCc
Confidence 9999988 999999999999876653
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-50 Score=339.41 Aligned_cols=255 Identities=23% Similarity=0.325 Sum_probs=223.9
Q ss_pred CcccccccCCCCCCEEEEecCCCchHHHHHHHHHHCCC---eEEEeeCCchhHHHHHHHHHhc--CCceEEEeccCCCHH
Q 024752 1 MSDFREQRWSLKGMTALVTGGTKGIGYAVVEELAAFGA---IVHTCSRNETELNQRIQEWKSK--GLQVSGSVCDLKIRA 75 (263)
Q Consensus 1 ~~~~~~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~---~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~ 75 (263)
|+..+....++++|++|||||++|||+++|++|+++|+ +|++++|+.+.++++.+++... +.++.++.+|+++++
T Consensus 21 m~~~~~~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~ 100 (287)
T 3rku_A 21 MSQGRKAAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAE 100 (287)
T ss_dssp CTTCHHHHHHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGG
T ss_pred cccCccchhhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHH
Confidence 56666666779999999999999999999999999998 9999999999999999888764 567999999999999
Q ss_pred HHHHHHHHHHhhcCCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccc
Q 024752 76 QREKLMETVSSQFDGKLNILINNAGTFI-PKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGV 154 (263)
Q Consensus 76 ~~~~~~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~ 154 (263)
+++++++++.+++ +++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+.
T Consensus 101 ~v~~~~~~~~~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~ 179 (287)
T 3rku_A 101 KIKPFIENLPQEF-KDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGR 179 (287)
T ss_dssp GHHHHHHTSCGGG-CSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT
T ss_pred HHHHHHHHHHHhc-CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhc
Confidence 9999999999998 89999999999876 567888999999999999999999999999999998888999999999999
Q ss_pred ccCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHH
Q 024752 155 IAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSS 234 (263)
Q Consensus 155 ~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~ 234 (263)
.+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++......... ....... ....+.+|+|+|+
T Consensus 180 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~-~~~~~~~----~~~~p~~pedvA~ 254 (287)
T 3rku_A 180 DAYPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNE-EQAKNVY----KDTTPLMADDVAD 254 (287)
T ss_dssp SCCTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCH-HHHHHHH----TTSCCEEHHHHHH
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcH-HHHHHhh----cccCCCCHHHHHH
Confidence 9999999999999999999999999999999999999999999998643322111 1111112 2223348999999
Q ss_pred HHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 235 VVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 235 ~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
+++||+++.+.+++|+.+.+|+|....
T Consensus 255 ~v~~l~s~~~~~i~g~~i~v~~g~~~p 281 (287)
T 3rku_A 255 LIVYATSRKQNTVIADTLIFPTNQASP 281 (287)
T ss_dssp HHHHHHTSCTTEEEEEEEEEETTEEET
T ss_pred HHHHHhCCCCCeEecceEEeeCCCCCC
Confidence 999999999999999999999998653
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-49 Score=325.24 Aligned_cols=241 Identities=29% Similarity=0.407 Sum_probs=215.9
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
|++++|+++||||++|||++++++|+++|++|++++|+++.+++..+++ + +.++.+|++++++++++++++.+++
T Consensus 1 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (245)
T 1uls_A 1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV---G--AHPVVMDVADPASVERGFAEALAHL 75 (245)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---T--CEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C--CEEEEecCCCHHHHHHHHHHHHHHc
Confidence 4678999999999999999999999999999999999988777665543 2 7788999999999999999999998
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||.. ..+.++...|+++|+
T Consensus 76 -g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~~~Y~asK~ 153 (245)
T 1uls_A 76 -GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYAASMA 153 (245)
T ss_dssp -SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHHHHHH
T ss_pred -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCchhHHHHHH
Confidence 899999999999877778889999999999999999999999999999988789999999998 888888899999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCcc
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~ 248 (263)
+++.|+++++.|++++||+||+|+||+++|++..... +.. ...+....|.+++.+|+|+|++++||+++.+.+++
T Consensus 154 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~---~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~t 228 (245)
T 1uls_A 154 GVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVP--EKV---REKAIAATPLGRAGKPLEVAYAALFLLSDESSFIT 228 (245)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSC--HHH---HHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcC--HHH---HHHHHhhCCCCCCcCHHHHHHHHHHHhCchhcCCc
Confidence 9999999999999999999999999999999875432 111 13334457888999999999999999999889999
Q ss_pred CcEEEeCCCcccc
Q 024752 249 GQVICVDGGYSVT 261 (263)
Q Consensus 249 G~~i~~dgG~~~~ 261 (263)
|+.|.+|||+.+.
T Consensus 229 G~~~~vdgG~~~~ 241 (245)
T 1uls_A 229 GQVLFVDGGRTIG 241 (245)
T ss_dssp SCEEEESTTTTTT
T ss_pred CCEEEECCCcccC
Confidence 9999999998764
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-49 Score=328.97 Aligned_cols=250 Identities=30% Similarity=0.398 Sum_probs=217.3
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc--CCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
|++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++... +.++.++.+|++++++++++++++.+
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (260)
T 2z1n_A 3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD 82 (260)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999888888877643 33788999999999999999999999
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhH
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASS 166 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s 166 (263)
++ + +|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.++...|++|
T Consensus 83 ~~-g-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s 160 (260)
T 2z1n_A 83 LG-G-ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIM 160 (260)
T ss_dssp TT-C-CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred hc-C-CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchhHHH
Confidence 98 6 999999999887777888999999999999999999999999999998878999999999999998899999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccc----hhH-HH-HHHhHhcCCCCCCCChhhHHHHHHHHc
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDS----NFL-EH-ANRMVLRTPMLRPGEPNEVSSVVAFLC 240 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~----~~~-~~-~~~~~~~~~~~~~~~~~~va~~~~~l~ 240 (263)
|++++.++++++.|++++||+||+|+||+++|++........ ... .. ...+....|.+++.+|+|++++++||+
T Consensus 161 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~ 240 (260)
T 2z1n_A 161 RLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFLA 240 (260)
T ss_dssp THHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHHHHHHHHh
Confidence 999999999999999999999999999999999875211000 000 00 123344568889999999999999999
Q ss_pred CCCCCCccCcEEEeCCCccc
Q 024752 241 LSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 241 s~~~~~~~G~~i~~dgG~~~ 260 (263)
++.++++||+.|.+|||+++
T Consensus 241 s~~~~~~tG~~i~vdGG~~~ 260 (260)
T 2z1n_A 241 SEKASFITGAVIPVDGGAHI 260 (260)
T ss_dssp SGGGTTCCSCEEEESTTTTC
T ss_pred CccccCCCCCEEEeCCCccC
Confidence 99889999999999999863
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-49 Score=326.80 Aligned_cols=249 Identities=30% Similarity=0.433 Sum_probs=218.8
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
++++|++|||||++|||++++++|+++|++|++++|+.+ ++..+++...+.++.++.+|++++++++++++++.+++
T Consensus 1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~- 77 (255)
T 2q2v_A 1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREF- 77 (255)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHc-
Confidence 478999999999999999999999999999999999887 55666666656778899999999999999999999998
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
+++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.++...|+++|++
T Consensus 78 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a 157 (255)
T 2q2v_A 78 GGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHG 157 (255)
T ss_dssp SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHHHHH
Confidence 89999999999987777788899999999999999999999999999998878999999999999998899999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEEecCcccCCcccccccc-chh---H-HHHHHh-HhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 170 MNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKD-SNF---L-EHANRM-VLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~---~-~~~~~~-~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
++.++++++.|++++||+||+|+||+++|++....... ... . .....+ ....|.+++.+|+|++++++||+++.
T Consensus 158 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~ 237 (255)
T 2q2v_A 158 VVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEA 237 (255)
T ss_dssp HHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHHHHHHHTSGG
T ss_pred HHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCc
Confidence 99999999999999999999999999999986542210 000 0 001222 34568889999999999999999998
Q ss_pred CCCccCcEEEeCCCcccc
Q 024752 244 TSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 244 ~~~~~G~~i~~dgG~~~~ 261 (263)
+.+++|+.|++|||++++
T Consensus 238 ~~~~tG~~~~vdgG~~~~ 255 (255)
T 2q2v_A 238 GSQVRGAAWNVDGGWLAQ 255 (255)
T ss_dssp GTTCCSCEEEESTTGGGC
T ss_pred cCCCCCCEEEECCCccCC
Confidence 899999999999998753
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-49 Score=331.57 Aligned_cols=243 Identities=32% Similarity=0.459 Sum_probs=215.0
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
+-++++||++|||||++|||+++|++|+++|++|++++|+.+..+ ....+.+|+++.+++.++++++.+
T Consensus 22 ~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~-----------~~~~~~~Dv~~~~~~~~~~~~~~~ 90 (266)
T 3uxy_A 22 SMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA-----------ADLHLPGDLREAAYADGLPGAVAA 90 (266)
T ss_dssp ----CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC-----------CSEECCCCTTSHHHHHHHHHHHHH
T ss_pred hhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-----------hhhccCcCCCCHHHHHHHHHHHHH
Confidence 345789999999999999999999999999999999999876432 124458999999999999999999
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhH
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASS 166 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s 166 (263)
.+ +++|+||||||+....++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+..+.++...|++|
T Consensus 91 ~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as 169 (266)
T 3uxy_A 91 GL-GRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLT 169 (266)
T ss_dssp HH-SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHHHHHH
T ss_pred hc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChHHHHH
Confidence 98 89999999999998888888999999999999999999999999999999888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccc--hhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCC
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDS--NFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~ 244 (263)
|+|++.|+++++.|++++||+||+|+||+|+|++........ ...+....+....|++++.+|+|+|++++||+++.+
T Consensus 170 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~ 249 (266)
T 3uxy_A 170 KAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLASDAA 249 (266)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence 999999999999999999999999999999999875543221 112223455667899999999999999999999999
Q ss_pred CCccCcEEEeCCCcccc
Q 024752 245 SYVTGQVICVDGGYSVT 261 (263)
Q Consensus 245 ~~~~G~~i~~dgG~~~~ 261 (263)
+++||+.|++|||++++
T Consensus 250 ~~itG~~i~vdGG~~~s 266 (266)
T 3uxy_A 250 RYLCGSLVEVNGGKAVA 266 (266)
T ss_dssp TTCCSCEEEESTTCCCC
T ss_pred cCCcCCEEEECcCEeCC
Confidence 99999999999999864
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-49 Score=329.39 Aligned_cols=248 Identities=27% Similarity=0.450 Sum_probs=222.8
Q ss_pred ccCCCCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEeeCCchhH-HHHHHHHHh-cCCceEEEeccCCCHHHHHHHHH
Q 024752 7 QRWSLKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRNETEL-NQRIQEWKS-KGLQVSGSVCDLKIRAQREKLME 82 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas--~giG~~~a~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~ 82 (263)
+.+++++|+++||||+ +|||++++++|+++|++|++++|+.... ++..+++.+ .+.++.++.+|++++++++++++
T Consensus 14 ~~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~ 93 (267)
T 3gdg_A 14 DQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVK 93 (267)
T ss_dssp HHHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHH
T ss_pred cccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHH
Confidence 4467999999999999 9999999999999999999999887665 666666654 36789999999999999999999
Q ss_pred HHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC--CCC
Q 024752 83 TVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI--PMC 160 (263)
Q Consensus 83 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~--~~~ 160 (263)
++.+++ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+. ++.
T Consensus 94 ~~~~~~-g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~ 172 (267)
T 3gdg_A 94 DVVADF-GQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQ 172 (267)
T ss_dssp HHHHHT-SCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSSCC
T ss_pred HHHHHc-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCCCC
Confidence 999998 89999999999998888889999999999999999999999999999998888999999999988765 467
Q ss_pred cchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHc
Q 024752 161 SIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC 240 (263)
Q Consensus 161 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~ 240 (263)
..|++||++++.|+++++.|+++. |+||+|+||+++|++...... .....+....|.+++.+|+|++++++||+
T Consensus 173 ~~Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~~~~-----~~~~~~~~~~~~~r~~~~~dva~~~~~l~ 246 (267)
T 3gdg_A 173 TSYNVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDFVPK-----ETQQLWHSMIPMGRDGLAKELKGAYVYFA 246 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGGSCH-----HHHHHHHTTSTTSSCEETHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHHHhccC-cEEEEEECCccccchhhhCCH-----HHHHHHHhcCCCCCCcCHHHHHhHhheee
Confidence 899999999999999999999987 999999999999999765422 12244556789999999999999999999
Q ss_pred CCCCCCccCcEEEeCCCcccc
Q 024752 241 LSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 241 s~~~~~~~G~~i~~dgG~~~~ 261 (263)
++.++++|||.|++|||++++
T Consensus 247 s~~~~~itG~~i~vdgG~~~r 267 (267)
T 3gdg_A 247 SDASTYTTGADLLIDGGYTTR 267 (267)
T ss_dssp STTCTTCCSCEEEESTTGGGC
T ss_pred cCccccccCCEEEECCceecC
Confidence 999999999999999999864
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-49 Score=327.81 Aligned_cols=240 Identities=18% Similarity=0.306 Sum_probs=201.3
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
...|++++|++|||||++|||++++++|+++|++|++++|+.+...+...+. .+.++.+|++++++++++++++.
T Consensus 20 ~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~ 94 (260)
T 3gem_A 20 QGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQA-----GAVALYGDFSCETGIMAFIDLLK 94 (260)
T ss_dssp -------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHH-----TCEEEECCTTSHHHHHHHHHHHH
T ss_pred ccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhc-----CCeEEECCCCCHHHHHHHHHHHH
Confidence 3457899999999999999999999999999999999999988765444332 26788999999999999999999
Q ss_pred hhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhh
Q 024752 86 SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYAS 165 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~ 165 (263)
+.+ +++|+||||||+....+ .+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|++
T Consensus 95 ~~~-g~iD~lv~nAg~~~~~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~a 172 (260)
T 3gem_A 95 TQT-SSLRAVVHNASEWLAET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCA 172 (260)
T ss_dssp HHC-SCCSEEEECCCCCCCCC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHHHHH
T ss_pred Hhc-CCCCEEEECCCccCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHhHHH
Confidence 998 89999999999876655 5678899999999999999999999999999988899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCC
Q 024752 166 SKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245 (263)
Q Consensus 166 sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~ 245 (263)
||++++.|+++++.|+++ +|+||+|+||+++|++.... . .........|++++.+|+|++++++||+ .++
T Consensus 173 sKaa~~~l~~~la~e~~~-~Irvn~v~PG~v~t~~~~~~----~---~~~~~~~~~p~~r~~~~edva~~v~~L~--~~~ 242 (260)
T 3gem_A 173 TKAGLESLTLSFAARFAP-LVKVNGIAPALLMFQPKDDA----A---YRANALAKSALGIEPGAEVIYQSLRYLL--DST 242 (260)
T ss_dssp HHHHHHHHHHHHHHHHTT-TCEEEEEEECTTCC----------------------CCSCCCCCTHHHHHHHHHHH--HCS
T ss_pred HHHHHHHHHHHHHHHHCC-CCEEEEEeecccccCCCCCH----H---HHHHHHhcCCCCCCCCHHHHHHHHHHHh--hCC
Confidence 999999999999999998 79999999999999875321 1 1134445678999999999999999998 467
Q ss_pred CccCcEEEeCCCccccC
Q 024752 246 YVTGQVICVDGGYSVTG 262 (263)
Q Consensus 246 ~~~G~~i~~dgG~~~~~ 262 (263)
++||+.|++|||++++|
T Consensus 243 ~itG~~i~vdGG~~~~~ 259 (260)
T 3gem_A 243 YVTGTTLTVNGGRHVKG 259 (260)
T ss_dssp SCCSCEEEESTTTTTC-
T ss_pred CCCCCEEEECCCcccCC
Confidence 99999999999999876
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-48 Score=327.12 Aligned_cols=249 Identities=21% Similarity=0.292 Sum_probs=221.4
Q ss_pred cCCCCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCC-ceEEEeccCCCHHHHHHHHHHH
Q 024752 8 RWSLKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL-QVSGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 8 ~~~~~~k~vlVtGas--~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~ 84 (263)
.+++++|++|||||+ +|||+++|++|+++|++|++++|+....+...+...+.+. ++.++.+|++++++++++++++
T Consensus 2 ~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 81 (266)
T 3oig_A 2 NFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASI 81 (266)
T ss_dssp CSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHH
T ss_pred ccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHH
Confidence 367899999999999 6699999999999999999999997665555554444444 7899999999999999999999
Q ss_pred HhhcCCCccEEEeCCCCCC----CCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCC
Q 024752 85 SSQFDGKLNILINNAGTFI----PKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMC 160 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~ 160 (263)
.+++ +++|++|||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|++ +|+||++||..+..+.++.
T Consensus 82 ~~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~ 158 (266)
T 3oig_A 82 KEQV-GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE--GGSIVTLTYLGGELVMPNY 158 (266)
T ss_dssp HHHH-SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCCTTT
T ss_pred HHHh-CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC--CceEEEEecccccccCCCc
Confidence 9998 89999999999886 456778899999999999999999999999999975 6899999999999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHc
Q 024752 161 SIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC 240 (263)
Q Consensus 161 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~ 240 (263)
..|++||+|+++|+++++.|++++||+||+|+||+|+|++........ +....+....|.+++.+|+|++++++||+
T Consensus 159 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~~~~~~~~p~dva~~v~~l~ 235 (266)
T 3oig_A 159 NVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFN---SILKDIEERAPLRRTTTPEEVGDTAAFLF 235 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHH---HHHHHHHHHSTTSSCCCHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchH---HHHHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence 999999999999999999999999999999999999999877654322 22355566789999999999999999999
Q ss_pred CCCCCCccCcEEEeCCCccccC
Q 024752 241 LSATSYVTGQVICVDGGYSVTG 262 (263)
Q Consensus 241 s~~~~~~~G~~i~~dgG~~~~~ 262 (263)
++.+.++||+.|.+|||++...
T Consensus 236 s~~~~~~tG~~i~vdGG~~~~~ 257 (266)
T 3oig_A 236 SDMSRGITGENLHVDSGFHITA 257 (266)
T ss_dssp SGGGTTCCSCEEEESTTGGGCC
T ss_pred CCchhcCcCCEEEECCCeEEee
Confidence 9999999999999999998764
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-49 Score=332.44 Aligned_cols=251 Identities=26% Similarity=0.432 Sum_probs=221.9
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCC---ceEEEeccCCCHHHHHHHHHHHH
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL---QVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
+++++|++|||||++|||++++++|+++|++|++++|+++.++++.+++...+. ++.++.+|++++++++++++++.
T Consensus 22 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 101 (297)
T 1xhl_A 22 ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTL 101 (297)
T ss_dssp -CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHH
Confidence 468999999999999999999999999999999999999999888888876655 78999999999999999999999
Q ss_pred hhcCCCccEEEeCCCCCCCCC--CCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC-CCCcc
Q 024752 86 SQFDGKLNILINNAGTFIPKE--TTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI-PMCSI 162 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-~~~~~ 162 (263)
+++ +++|+||||||+....+ +.+.+.++|++.+++|+.++++++++++|.|++++ |+||++||..+..+. ++...
T Consensus 102 ~~~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~~~~~~ 179 (297)
T 1xhl_A 102 AKF-GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGYPY 179 (297)
T ss_dssp HHH-SCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTTSHH
T ss_pred Hhc-CCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCCCCcch
Confidence 998 89999999999887666 77889999999999999999999999999998876 999999999998887 88899
Q ss_pred hhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccc----hhHHHHHHhHhcCCCCCCCChhhHHHHHHH
Q 024752 163 YASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDS----NFLEHANRMVLRTPMLRPGEPNEVSSVVAF 238 (263)
Q Consensus 163 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ 238 (263)
|++||++++.++++++.|++++||+||+|+||+|+|++........ ...+....+....|.+++.+|+|+|++++|
T Consensus 180 Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~ 259 (297)
T 1xhl_A 180 YACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVF 259 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999875432010 011112333345688899999999999999
Q ss_pred HcCCC-CCCccCcEEEeCCCcccc
Q 024752 239 LCLSA-TSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 239 l~s~~-~~~~~G~~i~~dgG~~~~ 261 (263)
|+++. +++++|+.|.+|||+.+.
T Consensus 260 l~s~~~~~~itG~~i~vdGG~~~~ 283 (297)
T 1xhl_A 260 LADRNLSSYIIGQSIVADGGSTLV 283 (297)
T ss_dssp HHCHHHHTTCCSCEEEESTTGGGC
T ss_pred HhCCcccCCccCcEEEECCCcccc
Confidence 99987 889999999999998754
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-49 Score=326.18 Aligned_cols=245 Identities=31% Similarity=0.400 Sum_probs=220.1
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
++++|+++||||++|||++++++|+++|++|++++|+++.+++..+++ +.++.++.+|++++++++++++++.+++
T Consensus 3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~- 78 (253)
T 1hxh_A 3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRL- 78 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHc-
Confidence 578999999999999999999999999999999999998888777666 4578899999999999999999999998
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
+++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++ ++||++||..+..+.++...|++||++
T Consensus 79 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~~sK~a 157 (253)
T 1hxh_A 79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAA 157 (253)
T ss_dssp CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCCCCccHHHHHHH
Confidence 8999999999998777888899999999999999999999999999998877 999999999999998999999999999
Q ss_pred HHHHHHHHHHHHccC--CcEEEEEecCcccCCccccccccchhHHHHHH-hHh---cCCCCCCCChhhHHHHHHHHcCCC
Q 024752 170 MNQLTKNLACEWAKD--KIRVNTVAPWVIRTPLLDTVEKDSNFLEHANR-MVL---RTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~--gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
++.++++++.|++++ ||++|+|+||+++|++........ .. .. +.. ..|.+++.+|+|+|++++||+++.
T Consensus 158 ~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-~~---~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~ 233 (253)
T 1hxh_A 158 VSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKG-VS---KEMVLHDPKLNRAGRAYMPERIAQLVLFLASDE 233 (253)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTT-CC---HHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchh-hh---HHHHhhhhccCccCCCCCHHHHHHHHHHHcCcc
Confidence 999999999999988 999999999999999865422111 11 11 222 457888899999999999999998
Q ss_pred CCCccCcEEEeCCCccccCC
Q 024752 244 TSYVTGQVICVDGGYSVTGF 263 (263)
Q Consensus 244 ~~~~~G~~i~~dgG~~~~~~ 263 (263)
+++++|+.|.+|||+...|+
T Consensus 234 ~~~~tG~~~~vdgG~~~~~~ 253 (253)
T 1hxh_A 234 SSVMSGSELHADNSILGMGL 253 (253)
T ss_dssp GTTCCSCEEEESSSCTTTTC
T ss_pred ccCCCCcEEEECCCccccCC
Confidence 89999999999999998885
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-48 Score=329.37 Aligned_cols=247 Identities=20% Similarity=0.291 Sum_probs=219.9
Q ss_pred CCCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 10 SLKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 10 ~~~~k~vlVtGas--~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
++++|++|||||+ +|||+++|++|+++|++|++++|+. .++..+++.+...++.++.+|++++++++++++++.+.
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 100 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKV 100 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHH
Confidence 4889999999998 7799999999999999999999998 34555556555556889999999999999999999999
Q ss_pred cCCCccEEEeCCCCCCC----CCCCC-CCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcc
Q 024752 88 FDGKLNILINNAGTFIP----KETTE-FTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSI 162 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~----~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~ 162 (263)
+ +++|+||||||+... .++.+ .+.++|++.+++|+.++++++++++|.|+++ .++||++||..+..+.++...
T Consensus 101 ~-g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~ 178 (280)
T 3nrc_A 101 W-DGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR-NASMVALTYIGAEKAMPSYNT 178 (280)
T ss_dssp C-SSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECGGGTSCCTTTHH
T ss_pred c-CCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEeccccccCCCCchh
Confidence 8 899999999998764 34444 7899999999999999999999999999876 699999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCC
Q 024752 163 YASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS 242 (263)
Q Consensus 163 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~ 242 (263)
|++||+|++.|+++++.|++++||+||+|+||+|+|++........ +.........|.+++.+|+|+|++++||+++
T Consensus 179 Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~p~~~~~~pedvA~~v~~l~s~ 255 (280)
T 3nrc_A 179 MGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFK---KMLDYNAMVSPLKKNVDIMEVGNTVAFLCSD 255 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHH---HHHHHHHHHSTTCSCCCHHHHHHHHHHTTSG
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchH---HHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence 9999999999999999999999999999999999999977654322 2235556678999999999999999999999
Q ss_pred CCCCccCcEEEeCCCccccCC
Q 024752 243 ATSYVTGQVICVDGGYSVTGF 263 (263)
Q Consensus 243 ~~~~~~G~~i~~dgG~~~~~~ 263 (263)
.+.++||+.|++|||+++.++
T Consensus 256 ~~~~~tG~~i~vdgG~~~~~~ 276 (280)
T 3nrc_A 256 MATGITGEVVHVDAGYHCVSM 276 (280)
T ss_dssp GGTTCCSCEEEESTTGGGCCC
T ss_pred ccCCcCCcEEEECCCccccCC
Confidence 999999999999999998875
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-48 Score=327.20 Aligned_cols=249 Identities=22% Similarity=0.259 Sum_probs=214.5
Q ss_pred cccCCCCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMET 83 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas--~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 83 (263)
.+..++++|++|||||+ +|||++++++|+++|++|++++|+....+ ..+++.+....+.++.+|+++++++++++++
T Consensus 7 ~~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 85 (271)
T 3ek2_A 7 HHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKD-RITEFAAEFGSELVFPCDVADDAQIDALFAS 85 (271)
T ss_dssp --CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHHHHHTTCCCEEECCTTCHHHHHHHHHH
T ss_pred CCccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHH-HHHHHHHHcCCcEEEECCCCCHHHHHHHHHH
Confidence 46678999999999999 99999999999999999999999965443 4444444344588999999999999999999
Q ss_pred HHhhcCCCccEEEeCCCCCCC----CCCCC-CCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCC
Q 024752 84 VSSQFDGKLNILINNAGTFIP----KETTE-FTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIP 158 (263)
Q Consensus 84 ~~~~~~~~id~li~~ag~~~~----~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~ 158 (263)
+.+++ +++|+||||||+... .++.+ .+.++|++.+++|+.++++++++++|.|++ .++||++||..+..+.+
T Consensus 86 ~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~ 162 (271)
T 3ek2_A 86 LKTHW-DSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERAIP 162 (271)
T ss_dssp HHHHC-SCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCT
T ss_pred HHHHc-CCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc--CceEEEEeccccccCCC
Confidence 99998 899999999998865 45555 899999999999999999999999999975 68999999999999999
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHH
Q 024752 159 MCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAF 238 (263)
Q Consensus 159 ~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ 238 (263)
+...|++||+|+++|+++++.|++++||+||+|+||+|+|++.......+ +....+....|.+++.+|+|++++++|
T Consensus 163 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~~~~~~~~pedva~~i~~ 239 (271)
T 3ek2_A 163 NYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFG---KILDFVESNSPLKRNVTIEQVGNAGAF 239 (271)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHH---HHHHHHHHHSTTSSCCCHHHHHHHHHH
T ss_pred CccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchH---HHHHHHHhcCCcCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999876654322 223555667899999999999999999
Q ss_pred HcCCCCCCccCcEEEeCCCcccc
Q 024752 239 LCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 239 l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
|+++.++++||+.|++|||++++
T Consensus 240 l~s~~~~~~tG~~i~vdgG~~~~ 262 (271)
T 3ek2_A 240 LLSDLASGVTAEVMHVDSGFNAV 262 (271)
T ss_dssp HHSGGGTTCCSEEEEESTTGGGB
T ss_pred HcCcccCCeeeeEEEECCCeeee
Confidence 99999999999999999999875
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-48 Score=328.39 Aligned_cols=248 Identities=26% Similarity=0.334 Sum_probs=214.5
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc-hhHHHHHHHHH-hcCCceEEEeccCCC----HHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE-TELNQRIQEWK-SKGLQVSGSVCDLKI----RAQREK 79 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~-~~~~~~~~~~~-~~~~~~~~~~~D~~~----~~~~~~ 79 (263)
...+++++|++|||||++|||++++++|+++|++|++++|+. +.++++.+++. ..+.++.++.+|+++ ++++++
T Consensus 16 ~~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~ 95 (288)
T 2x9g_A 16 PRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEE 95 (288)
T ss_dssp ------CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHH
T ss_pred CCCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHH
Confidence 445678999999999999999999999999999999999998 88888888886 556779999999999 999999
Q ss_pred HHHHHHhhcCCCccEEEeCCCCCCCCCC-----CC-----CCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC------Cc
Q 024752 80 LMETVSSQFDGKLNILINNAGTFIPKET-----TE-----FTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG------NG 143 (263)
Q Consensus 80 ~~~~~~~~~~~~id~li~~ag~~~~~~~-----~~-----~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~~ 143 (263)
+++++.+.+ +++|+||||||+....++ .+ .+.++|++.+++|+.++++++++++|.|++++ .+
T Consensus 96 ~~~~~~~~~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g 174 (288)
T 2x9g_A 96 IINSCFRAF-GRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNL 174 (288)
T ss_dssp HHHHHHHHH-SCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCE
T ss_pred HHHHHHHhc-CCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCe
Confidence 999999998 899999999998876666 56 78899999999999999999999999998766 78
Q ss_pred eEEEEccccccccCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCC
Q 024752 144 NIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPM 223 (263)
Q Consensus 144 ~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (263)
+||++||..+..+.++...|++||++++.|+++++.|++++||+||+|+||+++|++ . .. .. ....+....|+
T Consensus 175 ~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~~--~~---~~~~~~~~~p~ 247 (288)
T 2x9g_A 175 SIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-MG--EE---EKDKWRRKVPL 247 (288)
T ss_dssp EEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-SC--HH---HHHHHHHTCTT
T ss_pred EEEEEecccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-cC--hH---HHHHHHhhCCC
Confidence 999999999999999999999999999999999999999999999999999999998 3 21 11 12334455788
Q ss_pred CCC-CChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 224 LRP-GEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 224 ~~~-~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
+++ .+|+|++++++||+++.++++||+.|.+|||+++.
T Consensus 248 ~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~ 286 (288)
T 2x9g_A 248 GRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLV 286 (288)
T ss_dssp TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred CCCCCCHHHHHHHHHHHhCccccCccCCEEEECcchhhh
Confidence 888 99999999999999999999999999999998765
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-48 Score=323.86 Aligned_cols=246 Identities=29% Similarity=0.415 Sum_probs=215.7
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
++++|+++||||++|||++++++|+++|++|++++|+++. ++..+++. + .++.+|++++++++++++++.+.+
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~~~- 75 (256)
T 2d1y_A 3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG----G-AFFQVDLEDERERVRFVEEAAYAL- 75 (256)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT----C-EEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh----C-CEEEeeCCCHHHHHHHHHHHHHHc-
Confidence 4789999999999999999999999999999999999887 66665553 3 778999999999999999999998
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
+++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.++...|++||++
T Consensus 76 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a 155 (256)
T 2d1y_A 76 GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGG 155 (256)
T ss_dssp SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHHHHHHH
Confidence 89999999999987778888999999999999999999999999999998888999999999999998999999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccch-hHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCcc
Q 024752 170 MNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSN-FLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~ 248 (263)
++.++++++.|++++||+||+|+||+++|++......... ..+....+....|.+++.+|+|++++++||+++.+.+++
T Consensus 156 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s~~~~~~~ 235 (256)
T 2d1y_A 156 LVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFIT 235 (256)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCC
Confidence 9999999999999999999999999999998654210000 001112334456888999999999999999999888999
Q ss_pred CcEEEeCCCccccC
Q 024752 249 GQVICVDGGYSVTG 262 (263)
Q Consensus 249 G~~i~~dgG~~~~~ 262 (263)
|+.|++|||+.++.
T Consensus 236 G~~~~v~gG~~~~~ 249 (256)
T 2d1y_A 236 GAILPVDGGMTASF 249 (256)
T ss_dssp SCEEEESTTGGGBC
T ss_pred CCEEEECCCccccc
Confidence 99999999988764
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-48 Score=328.19 Aligned_cols=250 Identities=27% Similarity=0.441 Sum_probs=220.6
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCC---ceEEEeccCCCHHHHHHHHHHHHh
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL---QVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
++++|+++||||++|||++++++|+++|++|++++|+++.+++..+++...+. ++.++.+|++++++++++++++.+
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (280)
T 1xkq_A 3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK 82 (280)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999888888876555 789999999999999999999999
Q ss_pred hcCCCccEEEeCCCCCCCCC----CCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC-CCCc
Q 024752 87 QFDGKLNILINNAGTFIPKE----TTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI-PMCS 161 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~----~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-~~~~ 161 (263)
++ +++|+||||||+....+ +.+.+.++|++.+++|+.++++++++++|.|++++ ++||++||..+..+. ++..
T Consensus 83 ~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~ 160 (280)
T 1xkq_A 83 QF-GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFL 160 (280)
T ss_dssp HH-SCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSSH
T ss_pred hc-CCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCCCccc
Confidence 98 89999999999887666 67789999999999999999999999999998766 999999999998887 8889
Q ss_pred chhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccc----hhHHHHHHhHhcCCCCCCCChhhHHHHHH
Q 024752 162 IYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDS----NFLEHANRMVLRTPMLRPGEPNEVSSVVA 237 (263)
Q Consensus 162 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~va~~~~ 237 (263)
.|++||++++.|+++++.|++++||+||+|+||+++|++........ ...+....+....|.+++.+|+|+|++++
T Consensus 161 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~ 240 (280)
T 1xkq_A 161 YYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIIL 240 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999875431010 01112233334568889999999999999
Q ss_pred HHcCCC-CCCccCcEEEeCCCcccc
Q 024752 238 FLCLSA-TSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 238 ~l~s~~-~~~~~G~~i~~dgG~~~~ 261 (263)
||+++. +.+++|+.|++|||+.+.
T Consensus 241 ~l~s~~~~~~~tG~~i~vdgG~~~~ 265 (280)
T 1xkq_A 241 FLADRNLSFYILGQSIVADGGTSLV 265 (280)
T ss_dssp HHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred HhcCcccccCccCCeEEECCCcccc
Confidence 999987 889999999999998753
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-49 Score=325.68 Aligned_cols=242 Identities=31% Similarity=0.433 Sum_probs=216.4
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
++++|+++||||++|||++++++|+++|++|++++|+++.+++..+++ +.++.++.+|++++++++++++++.+++
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 77 (254)
T 1hdc_A 2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEF- 77 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEecCCCHHHHHHHHHHHHHHc-
Confidence 478999999999999999999999999999999999998877766554 4468889999999999999999999998
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
+++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.++...|++||++
T Consensus 78 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a 157 (254)
T 1hdc_A 78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWG 157 (254)
T ss_dssp SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHHHHHH
Confidence 89999999999987777788899999999999999999999999999998878999999999999988899999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCC-ChhhHHHHHHHHcCCCCCCcc
Q 024752 170 MNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPG-EPNEVSSVVAFLCLSATSYVT 248 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~va~~~~~l~s~~~~~~~ 248 (263)
++.|+++++.|++++||+||+|+||+++|++....... .. ..+....|.+++. +|+|+|++++||+++.+.+++
T Consensus 158 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~---~~~~~~~p~~~~~~~~~dvA~~v~~l~s~~~~~~t 232 (254)
T 1hdc_A 158 VRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIR--QG---EGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVT 232 (254)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCC--CS---TTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHhhhcCeEEEEEecccCcCccccccchh--HH---HHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCCC
Confidence 99999999999999999999999999999986543211 10 1222345778888 999999999999999889999
Q ss_pred CcEEEeCCCccc
Q 024752 249 GQVICVDGGYSV 260 (263)
Q Consensus 249 G~~i~~dgG~~~ 260 (263)
|+.|.+|||+.+
T Consensus 233 G~~~~vdgG~~~ 244 (254)
T 1hdc_A 233 GAELAVDGGWTT 244 (254)
T ss_dssp SCEEEESTTTTT
T ss_pred CCEEEECCCccc
Confidence 999999999865
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-49 Score=330.99 Aligned_cols=247 Identities=26% Similarity=0.348 Sum_probs=213.0
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCC------------chhHHHHHHHHHhcCCceEEEeccCCCHHH
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN------------ETELNQRIQEWKSKGLQVSGSVCDLKIRAQ 76 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 76 (263)
.+++||++|||||++|||+++|++|+++|++|++++|+ .+.+++...++...+.++.++.+|++++++
T Consensus 6 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 85 (287)
T 3pxx_A 6 GRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAA 85 (287)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHH
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHH
Confidence 36899999999999999999999999999999999998 667777777777778889999999999999
Q ss_pred HHHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc
Q 024752 77 REKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA 156 (263)
Q Consensus 77 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~ 156 (263)
++++++++.+++ +++|+||||||+.... .+.+.++|++.+++|+.++++++++++|+|. +.++||++||..+..+
T Consensus 86 v~~~~~~~~~~~-g~id~lv~nAg~~~~~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~g~iv~isS~~~~~~ 160 (287)
T 3pxx_A 86 VSRELANAVAEF-GKLDVVVANAGICPLG--AHLPVQAFADAFDVDFVGVINTVHAALPYLT--SGASIITTGSVAGLIA 160 (287)
T ss_dssp HHHHHHHHHHHH-SCCCEEEECCCCCCCC--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCC--TTCEEEEECCHHHHHH
T ss_pred HHHHHHHHHHHc-CCCCEEEECCCcCccc--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhh--cCcEEEEeccchhccc
Confidence 999999999998 8999999999987655 2378899999999999999999999999993 3689999999988765
Q ss_pred C-----------CCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccc---------cchhHHHHHH
Q 024752 157 I-----------PMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEK---------DSNFLEHANR 216 (263)
Q Consensus 157 ~-----------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~---------~~~~~~~~~~ 216 (263)
. ++...|++||++++.|+++++.|++++||+||+|+||+|+|++...... .....+....
T Consensus 161 ~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (287)
T 3pxx_A 161 AAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLA 240 (287)
T ss_dssp HHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHH
T ss_pred ccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHHhh
Confidence 5 5667899999999999999999999999999999999999999754211 0111111111
Q ss_pred --hHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 217 --MVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 217 --~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
.....| +++.+|+|++++++||+++.++++||+.|++|||++++
T Consensus 241 ~~~~~~~~-~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~~ 286 (287)
T 3pxx_A 241 FPAMQAMP-TPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAMLK 286 (287)
T ss_dssp GGGGCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred hhhhcccC-CCCCCHHHHHhhHheecchhhcCCCCceEeECchhhhc
Confidence 222344 78899999999999999999999999999999999875
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-48 Score=333.51 Aligned_cols=243 Identities=29% Similarity=0.341 Sum_probs=218.8
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEee-CCchhHHHHHHHHH-hcCCceEEEeccCCCHH-------------
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCS-RNETELNQRIQEWK-SKGLQVSGSVCDLKIRA------------- 75 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~-r~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------- 75 (263)
+++|++|||||++|||++++++|+++|++|++++ |+.+.++++.+++. ..+.++.++.+|+++++
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 123 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV 123 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence 8899999999999999999999999999999999 99999888888886 45667999999999999
Q ss_pred ----HHHHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCC--------------HHHHHHHHHhhhHhHHHHHHHHhHHH
Q 024752 76 ----QREKLMETVSSQFDGKLNILINNAGTFIPKETTEFT--------------EEDFSTVMTTNFESAYHLSQLAHPLL 137 (263)
Q Consensus 76 ----~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~~~~~~~~~~ 137 (263)
+++++++++.+.+ +++|+||||||+....++.+.+ .++|++.+++|+.++++++++++|.|
T Consensus 124 ~~~~~v~~~~~~~~~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m 202 (328)
T 2qhx_A 124 TLFTRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRV 202 (328)
T ss_dssp CHHHHHHHHHHHHHHHH-SCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhc-CCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998 8999999999998777777788 99999999999999999999999999
Q ss_pred hhCC------CceEEEEccccccccCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhH
Q 024752 138 KSAG------NGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFL 211 (263)
Q Consensus 138 ~~~~------~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~ 211 (263)
++++ .++||++||..+..+.++...|++||++++.|+++++.|++++||+||+|+||+|+|++ ... +
T Consensus 203 ~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~~---~--- 275 (328)
T 2qhx_A 203 AGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMP---P--- 275 (328)
T ss_dssp HHSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CSC---H---
T ss_pred HhcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-ccc---H---
Confidence 8876 79999999999999999999999999999999999999999999999999999999998 322 1
Q ss_pred HHHHHhHhcCCCC-CCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 212 EHANRMVLRTPML-RPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 212 ~~~~~~~~~~~~~-~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
.....+....|++ ++.+|+|+|++++||+++.+.++||+.|.+|||+.++
T Consensus 276 ~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~ 326 (328)
T 2qhx_A 276 AVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT 326 (328)
T ss_dssp HHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred HHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCcccC
Confidence 1223444567888 8999999999999999998999999999999998764
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-48 Score=324.03 Aligned_cols=244 Identities=29% Similarity=0.381 Sum_probs=220.6
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEE-eeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHT-CSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
..++.+|++|||||++|||++++++|+++|++|++ ..|+.+..++..+++...+.++.++.+|++++++++++++++.+
T Consensus 21 ~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 100 (267)
T 4iiu_A 21 QSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIA 100 (267)
T ss_dssp ----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 34678999999999999999999999999999855 66888888888888888888899999999999999999999999
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHh-hCCCceEEEEccccccccCCCCcchhh
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLK-SAGNGNIIFISSVAGVIAIPMCSIYAS 165 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~vsS~~~~~~~~~~~~Y~~ 165 (263)
.+ +++|+||||||+....++.+.+.++|++.+++|+.+++++++++++.|. +++.++||++||..+..+.++...|++
T Consensus 101 ~~-g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a 179 (267)
T 4iiu_A 101 QH-GAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSA 179 (267)
T ss_dssp HH-CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCHHHHH
T ss_pred Hh-CCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCchhHH
Confidence 98 8999999999998888888899999999999999999999999998886 566799999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCC
Q 024752 166 SKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245 (263)
Q Consensus 166 sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~ 245 (263)
||+|++.|+++++.|++++||+|++|+||+++|++.... ...........|.+++.+|+|+++++.||+++.++
T Consensus 180 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~------~~~~~~~~~~~p~~~~~~~edva~~~~~L~s~~~~ 253 (267)
T 4iiu_A 180 AKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME------ESALKEAMSMIPMKRMGQAEEVAGLASYLMSDIAG 253 (267)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC------HHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc------HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCccc
Confidence 999999999999999999999999999999999987643 12224455678999999999999999999999999
Q ss_pred CccCcEEEeCCCc
Q 024752 246 YVTGQVICVDGGY 258 (263)
Q Consensus 246 ~~~G~~i~~dgG~ 258 (263)
++|||.|++|||+
T Consensus 254 ~itG~~i~vdGG~ 266 (267)
T 4iiu_A 254 YVTRQVISINGGM 266 (267)
T ss_dssp TCCSCEEEESTTC
T ss_pred CccCCEEEeCCCc
Confidence 9999999999996
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-48 Score=323.97 Aligned_cols=249 Identities=28% Similarity=0.375 Sum_probs=218.9
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
.+++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++. .++.++.+|++++++++++++++.++
T Consensus 7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~d~~~v~~~~~~~~~~ 83 (263)
T 3ak4_A 7 IFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE---NGGFAVEVDVTKRASVDAAMQKAIDA 83 (263)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCT---TCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh---cCCeEEEEeCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999999887776655442 25788899999999999999999999
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccccccCCCCcchhhH
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVIAIPMCSIYASS 166 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~s 166 (263)
+ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++ .++||++||..+..+.++...|++|
T Consensus 84 ~-g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s 162 (263)
T 3ak4_A 84 L-GGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSAS 162 (263)
T ss_dssp H-TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred c-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhHHHH
Confidence 8 8999999999998777788889999999999999999999999999998876 6999999999999888889999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccc----c--chhHHHHHHhHhcCCCCCCCChhhHHHHHHHHc
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEK----D--SNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC 240 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~ 240 (263)
|++++.++++++.|++++||+||+|+||+++|++...... . ....+....+....|.+++.+|+|+|++++||+
T Consensus 163 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~ 242 (263)
T 3ak4_A 163 KFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLA 242 (263)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence 9999999999999999999999999999999998654211 0 000111233445678899999999999999999
Q ss_pred CCCCCCccCcEEEeCCCccc
Q 024752 241 LSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 241 s~~~~~~~G~~i~~dgG~~~ 260 (263)
++.+++++|+.|++|||+++
T Consensus 243 s~~~~~~tG~~~~vdgG~~~ 262 (263)
T 3ak4_A 243 SDAARFMTGQGINVTGGVRM 262 (263)
T ss_dssp SGGGTTCCSCEEEESSSSSC
T ss_pred CccccCCCCCEEEECcCEeC
Confidence 99888999999999999875
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-49 Score=330.06 Aligned_cols=236 Identities=21% Similarity=0.300 Sum_probs=209.1
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchh-------HHHHHHHHHhcCCceEEEeccCCCHHHHHHH
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-------LNQRIQEWKSKGLQVSGSVCDLKIRAQREKL 80 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 80 (263)
.|++++|++|||||++|||+++|++|+++|++|++++|+.+. +++..+++...+.++.++.+|++++++++++
T Consensus 1 ~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 80 (274)
T 3e03_A 1 SLTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAA 80 (274)
T ss_dssp CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHH
T ss_pred CCCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHH
Confidence 378999999999999999999999999999999999999764 6677777777788899999999999999999
Q ss_pred HHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc--CC
Q 024752 81 METVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA--IP 158 (263)
Q Consensus 81 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~--~~ 158 (263)
++++.+++ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+ .+
T Consensus 81 ~~~~~~~~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~ 159 (274)
T 3e03_A 81 VAATVDTF-GGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWG 159 (274)
T ss_dssp HHHHHHHH-SCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHH
T ss_pred HHHHHHHc-CCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCC
Confidence 99999998 8999999999998888888899999999999999999999999999999988899999999998877 67
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecC-cccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHH
Q 024752 159 MCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPW-VIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVA 237 (263)
Q Consensus 159 ~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~ 237 (263)
+...|++||+++++|+++++.|++++||+||+|+|| .++|++...... .+..++.+|+|+|++++
T Consensus 160 ~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~~~--------------~~~~~~~~pedvA~~v~ 225 (274)
T 3e03_A 160 AHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINMLPG--------------VDAAACRRPEIMADAAH 225 (274)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-------C--------------CCGGGSBCTHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhccc--------------ccccccCCHHHHHHHHH
Confidence 788999999999999999999999999999999999 689998733221 12334678999999999
Q ss_pred HHcCCCCCCccCcEEEeCCCcc
Q 024752 238 FLCLSATSYVTGQVICVDGGYS 259 (263)
Q Consensus 238 ~l~s~~~~~~~G~~i~~dgG~~ 259 (263)
||+++.++++|||.| +|+|+.
T Consensus 226 ~l~s~~~~~itG~~i-~~~g~~ 246 (274)
T 3e03_A 226 AVLTREAAGFHGQFL-IDDEVL 246 (274)
T ss_dssp HHHTSCCTTCCSCEE-EHHHHH
T ss_pred HHhCccccccCCeEE-EcCcch
Confidence 999999999999999 666653
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-48 Score=323.06 Aligned_cols=246 Identities=31% Similarity=0.398 Sum_probs=222.2
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEe-eCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTC-SRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
.+++|+++||||++|||++++++|+++|++|+++ +|+.+..++..+++...+.++.++.+|+++.++++++++++.+.+
T Consensus 4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (255)
T 3icc_A 4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL 83 (255)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHh
Confidence 4789999999999999999999999999999885 788888888888988888889999999999999999999988776
Q ss_pred C-----CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcch
Q 024752 89 D-----GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIY 163 (263)
Q Consensus 89 ~-----~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y 163 (263)
+ +++|++|||||+....++.+.+.++|++.+++|+.++++++++++|.|++ .++||++||..+..+.++...|
T Consensus 84 ~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~Y 161 (255)
T 3icc_A 84 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIINISSAATRISLPDFIAY 161 (255)
T ss_dssp HHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGTSCCTTBHHH
T ss_pred cccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC--CCEEEEeCChhhccCCCCcchh
Confidence 1 35999999999987777888999999999999999999999999999954 5899999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 164 ASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 164 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
++||++++.|+++++.|++++||+||+|+||+++|++........... .......|.+++.+|+|+++++.||+++.
T Consensus 162 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~dva~~~~~l~s~~ 238 (255)
T 3icc_A 162 SMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMK---QYATTISAFNRLGEVEDIADTAAFLASPD 238 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHH---HHHHHTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHH---HhhhccCCcCCCCCHHHHHHHHHHHhCcc
Confidence 999999999999999999999999999999999999987765443322 44455678899999999999999999999
Q ss_pred CCCccCcEEEeCCCccc
Q 024752 244 TSYVTGQVICVDGGYSV 260 (263)
Q Consensus 244 ~~~~~G~~i~~dgG~~~ 260 (263)
++++||+.|++|||+++
T Consensus 239 ~~~~tG~~i~vdgG~~l 255 (255)
T 3icc_A 239 SRWVTGQLIDVSGGSCL 255 (255)
T ss_dssp GTTCCSCEEEESSSTTC
T ss_pred cCCccCCEEEecCCeeC
Confidence 99999999999999864
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-48 Score=325.75 Aligned_cols=250 Identities=30% Similarity=0.441 Sum_probs=218.3
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchh-HHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-LNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
+.+++++|++|||||++|||++++++|+++|++|++++|+.+. .+++.+++...+.++.++.+|+++++++.++++++.
T Consensus 23 ~~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 102 (283)
T 1g0o_A 23 QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAV 102 (283)
T ss_dssp GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999998764 556667777767789999999999999999999999
Q ss_pred hhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCC-Ccchh
Q 024752 86 SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPM-CSIYA 164 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~-~~~Y~ 164 (263)
+.+ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|+ +.|+||++||..+..+.++ ...|+
T Consensus 103 ~~~-g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~g~iv~isS~~~~~~~~~~~~~Y~ 179 (283)
T 1g0o_A 103 KIF-GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE--IGGRLILMGSITGQAKAVPKHAVYS 179 (283)
T ss_dssp HHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC--TTCEEEEECCGGGTCSSCSSCHHHH
T ss_pred HHc-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh--cCCeEEEEechhhccCCCCCCcchH
Confidence 998 8999999999998777788889999999999999999999999999993 4689999999998887664 88999
Q ss_pred hHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccccc----c-h-hHHHHHHhHh--cCCCCCCCChhhHHHHH
Q 024752 165 SSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKD----S-N-FLEHANRMVL--RTPMLRPGEPNEVSSVV 236 (263)
Q Consensus 165 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----~-~-~~~~~~~~~~--~~~~~~~~~~~~va~~~ 236 (263)
+||++++.|+++++.|++++||+||+|+||+++|++....... . . ..+....+.. ..|++++.+|+|+++++
T Consensus 180 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v 259 (283)
T 1g0o_A 180 GSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVV 259 (283)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCCCcCHHHHHHHH
Confidence 9999999999999999999999999999999999986543111 0 0 0112233334 67899999999999999
Q ss_pred HHHcCCCCCCccCcEEEeCCCcc
Q 024752 237 AFLCLSATSYVTGQVICVDGGYS 259 (263)
Q Consensus 237 ~~l~s~~~~~~~G~~i~~dgG~~ 259 (263)
+||+++.+.++||+.|.+|||++
T Consensus 260 ~~l~s~~~~~itG~~i~vdgG~~ 282 (283)
T 1g0o_A 260 CFLASNDGGWVTGKVIGIDGGAC 282 (283)
T ss_dssp HHHHSGGGTTCCSCEEEESTTCC
T ss_pred HHHhCccccCcCCCEEEeCCCcc
Confidence 99999999999999999999975
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-48 Score=324.96 Aligned_cols=248 Identities=28% Similarity=0.403 Sum_probs=208.8
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhH-HHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETEL-NQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
+++.+|+++||||++|||++++++|+++|++|++++|+.+.. +...+.+...+.++.++.+|++++++++++++++.++
T Consensus 3 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 82 (264)
T 3i4f_A 3 LGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSH 82 (264)
T ss_dssp ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 566789999999999999999999999999999997766554 4444444445667999999999999999999999999
Q ss_pred cCCCccEEEeCCC--CCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccc-cc-cccCCCCcch
Q 024752 88 FDGKLNILINNAG--TFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSV-AG-VIAIPMCSIY 163 (263)
Q Consensus 88 ~~~~id~li~~ag--~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~-~~-~~~~~~~~~Y 163 (263)
+ +++|+|||||| .....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||. .. ..+.++...|
T Consensus 83 ~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y 161 (264)
T 3i4f_A 83 F-GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAF 161 (264)
T ss_dssp H-SCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCHHH
T ss_pred h-CCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCchh
Confidence 8 89999999999 445567788899999999999999999999999999999888999999998 44 4566778899
Q ss_pred hhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 164 ASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 164 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
++||++++.|+++++.|++++||+||+|+||+++|++...... +.........|++++.+|+|+++++.||+++.
T Consensus 162 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-----~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~ 236 (264)
T 3i4f_A 162 AAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQ-----EARQLKEHNTPIGRSGTGEDIARTISFLCEDD 236 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHH-----HHHHC--------CCCCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccH-----HHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence 9999999999999999999999999999999999998765432 12233445678899999999999999999999
Q ss_pred CCCccCcEEEeCCCccccC
Q 024752 244 TSYVTGQVICVDGGYSVTG 262 (263)
Q Consensus 244 ~~~~~G~~i~~dgG~~~~~ 262 (263)
+.++|||.|++|||++...
T Consensus 237 ~~~itG~~i~vdGG~~~~~ 255 (264)
T 3i4f_A 237 SDMITGTIIEVTGAVDVIH 255 (264)
T ss_dssp GTTCCSCEEEESCSCCCCC
T ss_pred cCCCCCcEEEEcCceeecc
Confidence 9999999999999998754
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-48 Score=323.02 Aligned_cols=248 Identities=24% Similarity=0.322 Sum_probs=215.5
Q ss_pred CCCCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 9 WSLKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 9 ~~~~~k~vlVtGas--~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
+++++|+++||||+ +|||++++++|+++|++|++++|+++ .++..+++.+....+.++.+|++++++++++++++.+
T Consensus 4 ~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (261)
T 2wyu_A 4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKE 82 (261)
T ss_dssp ECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHH
Confidence 46789999999999 99999999999999999999999985 4444455544323478899999999999999999999
Q ss_pred hcCCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcc
Q 024752 87 QFDGKLNILINNAGTFIP----KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSI 162 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~ 162 (263)
++ +++|+||||||+... .++.+.+.++|++.+++|+.++++++++++|.|++ +|+||++||..+..+.++...
T Consensus 83 ~~-g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~ 159 (261)
T 2wyu_A 83 AF-GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKYNV 159 (261)
T ss_dssp HH-SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBCTTCHH
T ss_pred Hc-CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc--CCEEEEEecccccCCCCCchH
Confidence 98 899999999998764 56778899999999999999999999999999975 589999999999988888999
Q ss_pred hhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCC
Q 024752 163 YASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS 242 (263)
Q Consensus 163 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~ 242 (263)
|++||++++.++++++.|++++||+||+|+||+|+|++....... .+....+....|++++.+|+|++++++||+++
T Consensus 160 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~---~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~ 236 (261)
T 2wyu_A 160 MAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGF---TKMYDRVAQTAPLRRNITQEEVGNLGLFLLSP 236 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTH---HHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhcccc---HHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCh
Confidence 999999999999999999999999999999999999986543211 12223444567889999999999999999999
Q ss_pred CCCCccCcEEEeCCCccccCC
Q 024752 243 ATSYVTGQVICVDGGYSVTGF 263 (263)
Q Consensus 243 ~~~~~~G~~i~~dgG~~~~~~ 263 (263)
.+.+++|+.|++|||++++++
T Consensus 237 ~~~~~tG~~~~vdgG~~~~~~ 257 (261)
T 2wyu_A 237 LASGITGEVVYVDAGYHIMGM 257 (261)
T ss_dssp GGTTCCSCEEEESTTGGGBC-
T ss_pred hhcCCCCCEEEECCCccccCC
Confidence 889999999999999988763
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-49 Score=327.87 Aligned_cols=239 Identities=25% Similarity=0.358 Sum_probs=198.9
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
.|++++|++|||||++|||++++++|+++|++|++++|+.+... ++ .+.++.++.+|++++++++++++.+.+
T Consensus 4 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---~~---~~~~~~~~~~D~~~~~~v~~~~~~~~~- 76 (257)
T 3tl3_A 4 SMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVV---AD---LGDRARFAAADVTDEAAVASALDLAET- 76 (257)
T ss_dssp ------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHH---HH---TCTTEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred cceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHH---Hh---cCCceEEEECCCCCHHHHHHHHHHHHH-
Confidence 57899999999999999999999999999999999999655332 22 356789999999999999999998877
Q ss_pred cCCCccEEEeCCCCCCCCC----CCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhh--------CCCceEEEEccccccc
Q 024752 88 FDGKLNILINNAGTFIPKE----TTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKS--------AGNGNIIFISSVAGVI 155 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~----~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--------~~~~~iv~vsS~~~~~ 155 (263)
+ +++|+||||||+....+ ..+.+.++|++.+++|+.++++++++++|.|.+ ++.|+||++||..+..
T Consensus 77 ~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 155 (257)
T 3tl3_A 77 M-GTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFD 155 (257)
T ss_dssp H-SCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--C
T ss_pred h-CCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcC
Confidence 7 89999999999875432 235789999999999999999999999999988 5678999999999999
Q ss_pred cCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCC-CCCCChhhHHH
Q 024752 156 AIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPM-LRPGEPNEVSS 234 (263)
Q Consensus 156 ~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~ 234 (263)
+.++...|++||+++++|+++++.|++++||+||+|+||+|+|++....... .........|. +++.+|+|+++
T Consensus 156 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-----~~~~~~~~~~~~~r~~~p~dva~ 230 (257)
T 3tl3_A 156 GQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEE-----ARASLGKQVPHPSRLGNPDEYGA 230 (257)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHH-----HHHHHHHTSSSSCSCBCHHHHHH
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHH-----HHHHHHhcCCCCCCccCHHHHHH
Confidence 8888899999999999999999999999999999999999999998654321 12344556777 89999999999
Q ss_pred HHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 235 VVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 235 ~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
+++||+++ +++|||.|.+|||+++.
T Consensus 231 ~v~~l~s~--~~itG~~i~vdGG~~~~ 255 (257)
T 3tl3_A 231 LAVHIIEN--PMLNGEVIRLDGAIRMA 255 (257)
T ss_dssp HHHHHHHC--TTCCSCEEEESTTC---
T ss_pred HHHHHhcC--CCCCCCEEEECCCccCC
Confidence 99999986 79999999999999764
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-48 Score=320.83 Aligned_cols=242 Identities=25% Similarity=0.331 Sum_probs=211.7
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCC--CeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
+|++|||||++|||++++++|+++| +.|++++|+++.++++.+++ +.++.++.+|++++++++++++++.+++ +
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g 77 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY---GDRFFYVVGDITEDSVLKQLVNAAVKGH-G 77 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH---GGGEEEEESCTTSHHHHHHHHHHHHHHH-S
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh---CCceEEEECCCCCHHHHHHHHHHHHHhc-C
Confidence 6999999999999999999999985 78999999999888877665 4578999999999999999999999998 8
Q ss_pred CccEEEeCCCCCCC-CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHH
Q 024752 91 KLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 91 ~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
++|+||||||+... .++.+.+.++|++.+++|+.++++++++++|.|++++ |+||++||..+..+.++...|++||++
T Consensus 78 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a 156 (254)
T 3kzv_A 78 KIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSWGAYGSSKAA 156 (254)
T ss_dssp CCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSCCSHHHHHHHHH
T ss_pred CccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCCCcchHHHHHHH
Confidence 99999999998654 7788899999999999999999999999999998875 999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccc----hhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC-C
Q 024752 170 MNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDS----NFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA-T 244 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~-~ 244 (263)
++.|+++++.|+ .||+||+|+||+++|++........ ...+....+....|.+++.+|+|++++++||+++. +
T Consensus 157 ~~~~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~L~s~~~~ 234 (254)
T 3kzv_A 157 LNHFAMTLANEE--RQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALHGIP 234 (254)
T ss_dssp HHHHHHHHHHHC--TTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHhhc--cCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcccHHHHHHHHHhhccc
Confidence 999999999998 5899999999999999986653321 11223345556679999999999999999999998 5
Q ss_pred CCccCcEEEeCCCcccc
Q 024752 245 SYVTGQVICVDGGYSVT 261 (263)
Q Consensus 245 ~~~~G~~i~~dgG~~~~ 261 (263)
+++|||.|++|||....
T Consensus 235 ~~itG~~i~vdg~~~~~ 251 (254)
T 3kzv_A 235 DGVNGQYLSYNDPALAD 251 (254)
T ss_dssp GGGTTCEEETTCGGGGG
T ss_pred CCCCccEEEecCccccc
Confidence 99999999999998654
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-48 Score=323.94 Aligned_cols=247 Identities=30% Similarity=0.465 Sum_probs=215.1
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
..++++|+++||||++|||++++++|+++|++|++++|+++..+++.+++. .+.++.+|++++++++++++++.++
T Consensus 4 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~~~~~ 79 (270)
T 1yde_A 4 GTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP----GAVFILCDVTQEDDVKTLVSETIRR 79 (270)
T ss_dssp CCTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT----TEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CCeEEEcCCCCHHHHHHHHHHHHHH
Confidence 346889999999999999999999999999999999999988776665542 3788999999999999999999999
Q ss_pred cCCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhH
Q 024752 88 FDGKLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASS 166 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s 166 (263)
+ +++|+||||||+... .++.+.+.++|++.+++|+.++++++++++|.|+++ .++||++||..+..+.++...|+++
T Consensus 80 ~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~as 157 (270)
T 1yde_A 80 F-GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVAT 157 (270)
T ss_dssp H-SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHHHH
T ss_pred c-CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccCCCCCCcccHHH
Confidence 8 899999999998754 567788999999999999999999999999999765 5899999999998888889999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccccc-chhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCC
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKD-SNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~ 245 (263)
|++++.++++++.|++++||+||+|+||+++|++....... ..............|++++.+|+|++++++||+++ ++
T Consensus 158 Kaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~-~~ 236 (270)
T 1yde_A 158 KGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-AN 236 (270)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHH-CT
T ss_pred HHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCCCCcCHHHHHHHHHHHccc-CC
Confidence 99999999999999999999999999999999986543211 11111112223457899999999999999999998 78
Q ss_pred CccCcEEEeCCCcccc
Q 024752 246 YVTGQVICVDGGYSVT 261 (263)
Q Consensus 246 ~~~G~~i~~dgG~~~~ 261 (263)
++|||.|.+|||+.+.
T Consensus 237 ~itG~~i~vdGG~~~~ 252 (270)
T 1yde_A 237 FCTGIELLVTGGAELG 252 (270)
T ss_dssp TCCSCEEEESTTTTSC
T ss_pred CcCCCEEEECCCeecc
Confidence 9999999999998764
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-47 Score=322.63 Aligned_cols=243 Identities=22% Similarity=0.329 Sum_probs=210.6
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeC-CchhHHHHHHHHHhc-CCceEEEeccCCCH----HHHHHHHHH
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-NETELNQRIQEWKSK-GLQVSGSVCDLKIR----AQREKLMET 83 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~----~~~~~~~~~ 83 (263)
++++|++|||||++|||++++++|+++|++|++++| +++.++++.+++... +.++.++.+|++++ +++++++++
T Consensus 8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 87 (276)
T 1mxh_A 8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC 87 (276)
T ss_dssp ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHH
Confidence 478999999999999999999999999999999999 888888888888765 66789999999999 999999999
Q ss_pred HHhhcCCCccEEEeCCCCCCCCCCCCCCH-----------HHHHHHHHhhhHhHHHHHHHHhHHHhhCCC------ceEE
Q 024752 84 VSSQFDGKLNILINNAGTFIPKETTEFTE-----------EDFSTVMTTNFESAYHLSQLAHPLLKSAGN------GNII 146 (263)
Q Consensus 84 ~~~~~~~~id~li~~ag~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~------~~iv 146 (263)
+.+.+ +++|+||||||+....++.+.+. ++|++.+++|+.++++++++++|.|+ ++. ++||
T Consensus 88 ~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~~~~g~iv 165 (276)
T 1mxh_A 88 SFRAF-GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGAWRSRNLSVV 165 (276)
T ss_dssp HHHHH-SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCEEEE
T ss_pred HHHhc-CCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCCCCCCCcEEE
Confidence 99998 89999999999987777777888 99999999999999999999999998 545 8999
Q ss_pred EEccccccccCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCC-
Q 024752 147 FISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLR- 225 (263)
Q Consensus 147 ~vsS~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~- 225 (263)
++||..+..+.++...|++||++++.|+++++.|++++||+||+|+||+++|+ ... .+.. ...+....|+++
T Consensus 166 ~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~--~~~--~~~~---~~~~~~~~p~~r~ 238 (276)
T 1mxh_A 166 NLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP--PAM--PQET---QEEYRRKVPLGQS 238 (276)
T ss_dssp EECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC--SSS--CHHH---HHHHHTTCTTTSC
T ss_pred EECchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC--ccC--CHHH---HHHHHhcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999 221 1111 133344578888
Q ss_pred CCChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 226 PGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 226 ~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
+.+|+|++++++||+++.+.+++|+.|++|||+++.
T Consensus 239 ~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~ 274 (276)
T 1mxh_A 239 EASAAQIADAIAFLVSKDAGYITGTTLKVDGGLILA 274 (276)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred CCCHHHHHHHHHHHhCccccCccCcEEEECCchhcc
Confidence 899999999999999998899999999999998753
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-48 Score=318.82 Aligned_cols=242 Identities=26% Similarity=0.346 Sum_probs=197.5
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
|++++|+++||||++|||++++++|+++|++|++++|+++. ... .+.++.+|++|+++++++++++.+++
T Consensus 3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--------~~~--~~~~~~~D~~d~~~~~~~~~~~~~~~ 72 (250)
T 2fwm_X 3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ--------EQY--PFATEVMDVADAAQVAQVCQRLLAET 72 (250)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS--------SCC--SSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh--------hcC--CceEEEcCCCCHHHHHHHHHHHHHHc
Confidence 67899999999999999999999999999999999998752 111 26788999999999999999999998
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.++...|++||+
T Consensus 73 -g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 151 (250)
T 2fwm_X 73 -ERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKA 151 (250)
T ss_dssp -SCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred -CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHHHHH
Confidence 8999999999998877888899999999999999999999999999999887899999999999999899999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHH-HHH----HhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLE-HAN----RMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
+++.++++++.|++++||+||+|+||+++|++.......+...+ ... .+....|.+++.+|+|+|++++||+++.
T Consensus 152 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~ 231 (250)
T 2fwm_X 152 ALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDL 231 (250)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------------CHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCCCCCcCHHHHHHHHHHHhCcc
Confidence 99999999999999999999999999999998654321111110 000 0111467888999999999999999998
Q ss_pred CCCccCcEEEeCCCcccc
Q 024752 244 TSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 244 ~~~~~G~~i~~dgG~~~~ 261 (263)
+++++|+.|.+|||++++
T Consensus 232 ~~~~tG~~i~vdGG~~~~ 249 (250)
T 2fwm_X 232 ASHITLQDIVVDGGSTLG 249 (250)
T ss_dssp GTTCCSCEEEESTTTTTT
T ss_pred ccCCCCCEEEECCCcccC
Confidence 899999999999998753
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-48 Score=321.34 Aligned_cols=254 Identities=62% Similarity=1.006 Sum_probs=200.5
Q ss_pred ccccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHH
Q 024752 5 REQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 5 ~~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 84 (263)
..+.|++++|+++||||++|||++++++|+++|++|++++|+++.+++..+++...+.++.++.+|++++++++++++++
T Consensus 6 ~~~~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 85 (266)
T 1xq1_A 6 QSQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTV 85 (266)
T ss_dssp -CCTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred cCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHH
Confidence 34667899999999999999999999999999999999999999888888888777778999999999999999999999
Q ss_pred HhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchh
Q 024752 85 SSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYA 164 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~ 164 (263)
.+.+++++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.++...|+
T Consensus 86 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~ 165 (266)
T 1xq1_A 86 SSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYS 165 (266)
T ss_dssp HHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHH
T ss_pred HHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCCchHH
Confidence 98875689999999999877778888999999999999999999999999999888789999999999998888889999
Q ss_pred hHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCC
Q 024752 165 SSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244 (263)
Q Consensus 165 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~ 244 (263)
++|++++.++++++.|++++||++++|+||+++|++...... .... .......|.+++.+|+|+++++.+|+++.+
T Consensus 166 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~dva~~~~~l~~~~~ 241 (266)
T 1xq1_A 166 ATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYD-DEFK---KVVISRKPLGRFGEPEEVSSLVAFLCMPAA 241 (266)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-----------------------------CCGGGGHHHHHHHTSGGG
T ss_pred HHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcC-HHHH---HHHHhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence 999999999999999999999999999999999998764321 1111 223334677888999999999999999888
Q ss_pred CCccCcEEEeCCCccccC
Q 024752 245 SYVTGQVICVDGGYSVTG 262 (263)
Q Consensus 245 ~~~~G~~i~~dgG~~~~~ 262 (263)
.+++|+.|++|||+.+.+
T Consensus 242 ~~~~G~~~~v~gG~~~~~ 259 (266)
T 1xq1_A 242 SYITGQTICVDGGLTVNG 259 (266)
T ss_dssp TTCCSCEEECCCCEEETT
T ss_pred cCccCcEEEEcCCccccc
Confidence 899999999999998765
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-48 Score=319.27 Aligned_cols=239 Identities=19% Similarity=0.211 Sum_probs=200.0
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
.+++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++.+|++++++++++++++.+.
T Consensus 2 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (252)
T 3h7a_A 2 SLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH 81 (252)
T ss_dssp ---CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh
Confidence 36789999999999999999999999999999999999999999999999888888999999999999999999999887
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+++|+||||||+....++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+..+.++...|++||
T Consensus 82 --g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 159 (252)
T 3h7a_A 82 --APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAK 159 (252)
T ss_dssp --SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHHHHHHH
T ss_pred --CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCccHHHHH
Confidence 789999999999888888899999999999999999999999999999988889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEE-EEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 168 VAMNQLTKNLACEWAKDKIRV-NTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v-~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
+|+++|+++++.|++++||+| |+|+||+|+|++........ ........|.+ +.+|+|+|++++||+++...+
T Consensus 160 aa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~-----~~~~~~~~~~~-~~~pedvA~~~~~l~s~~~~~ 233 (252)
T 3h7a_A 160 FGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQM-----FGKDALANPDL-LMPPAAVAGAYWQLYQQPKSA 233 (252)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEEC---------------------------------CCHHHHHHHHHHHHHCCGGG
T ss_pred HHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchhh-----hhhhhhcCCcc-CCCHHHHHHHHHHHHhCchhc
Confidence 999999999999999999999 99999999999986643221 12233345666 889999999999999988888
Q ss_pred ccCcEEEe
Q 024752 247 VTGQVICV 254 (263)
Q Consensus 247 ~~G~~i~~ 254 (263)
++|+....
T Consensus 234 ~~~~i~~~ 241 (252)
T 3h7a_A 234 WTFEMEIR 241 (252)
T ss_dssp BCSEEEEB
T ss_pred ceeeEEee
Confidence 99987654
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-48 Score=323.94 Aligned_cols=250 Identities=30% Similarity=0.452 Sum_probs=208.1
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHH---hcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWK---SKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
++++|+++||||++|||++++++|+++|++|++++|+++.++++.+++. ..+.++.++.+|++++++++++++++.+
T Consensus 3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (278)
T 1spx_A 3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG 82 (278)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence 3789999999999999999999999999999999999998888887773 3345688999999999999999999999
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCC----CHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccc-cccCCCCc
Q 024752 87 QFDGKLNILINNAGTFIPKETTEF----TEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAG-VIAIPMCS 161 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~----~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~-~~~~~~~~ 161 (263)
++ +++|+||||||+....++.+. +.++|++.+++|+.++++++++++|.|++++ ++||++||..+ ..+.++..
T Consensus 83 ~~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~ 160 (278)
T 1spx_A 83 KF-GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFP 160 (278)
T ss_dssp HH-SCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSH
T ss_pred Hc-CCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCCCCcc
Confidence 98 899999999998877777777 9999999999999999999999999998765 99999999998 88888899
Q ss_pred chhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccc-cchh---HHHHHHhHhcCCCCCCCChhhHHHHHH
Q 024752 162 IYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEK-DSNF---LEHANRMVLRTPMLRPGEPNEVSSVVA 237 (263)
Q Consensus 162 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~va~~~~ 237 (263)
.|++||++++.++++++.|++++||+||+|+||+++|++...... .... ...........|.+++.+|+|++++++
T Consensus 161 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~ 240 (278)
T 1spx_A 161 YYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIA 240 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCCcCCCCHHHHHHHHH
Confidence 999999999999999999999999999999999999998654211 1111 111233344568889999999999999
Q ss_pred HHcCCCCCC-ccCcEEEeCCCcccc
Q 024752 238 FLCLSATSY-VTGQVICVDGGYSVT 261 (263)
Q Consensus 238 ~l~s~~~~~-~~G~~i~~dgG~~~~ 261 (263)
||+++...+ ++|+.|++|||+.++
T Consensus 241 ~l~s~~~~~~~tG~~~~vdgG~~~~ 265 (278)
T 1spx_A 241 FLADRKTSSYIIGHQLVVDGGSSLI 265 (278)
T ss_dssp HHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred HHcCccccCcccCcEEEECCCcccc
Confidence 999987776 999999999998765
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-48 Score=321.44 Aligned_cols=246 Identities=21% Similarity=0.316 Sum_probs=213.5
Q ss_pred CCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 11 LKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 11 ~~~k~vlVtGas--~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
+++|++|||||+ +|||++++++|+++|++|++++|++ ..++..+++........++.+|++++++++++++++.+++
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW 85 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHc
Confidence 789999999999 9999999999999999999999987 4445555554432334788999999999999999999998
Q ss_pred CCCccEEEeCCCCCCC----CCCCC-CCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcch
Q 024752 89 DGKLNILINNAGTFIP----KETTE-FTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIY 163 (263)
Q Consensus 89 ~~~id~li~~ag~~~~----~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y 163 (263)
+++|+||||||+... .++.+ .+.++|++.+++|+.++++++++++|.|++ .|+||++||..+..+.++...|
T Consensus 86 -g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y 162 (265)
T 1qsg_A 86 -PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVM 162 (265)
T ss_dssp -SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTTHH
T ss_pred -CCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEcchhhccCCCCchHH
Confidence 899999999998753 45566 789999999999999999999999999975 5899999999999888889999
Q ss_pred hhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 164 ASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 164 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
++||++++.++++++.|++++||+||+|+||+++|++....... .+....+....|++++.+|+|++++++||+++.
T Consensus 163 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~ 239 (265)
T 1qsg_A 163 GLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDF---RKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDL 239 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTH---HHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGG
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhccccc---HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCch
Confidence 99999999999999999999999999999999999987543211 122233444578889999999999999999998
Q ss_pred CCCccCcEEEeCCCccccCC
Q 024752 244 TSYVTGQVICVDGGYSVTGF 263 (263)
Q Consensus 244 ~~~~~G~~i~~dgG~~~~~~ 263 (263)
+.+++|+.|++|||+.++++
T Consensus 240 ~~~~tG~~~~vdgG~~~~~~ 259 (265)
T 1qsg_A 240 SAGISGEVVHVDGGFSIAAM 259 (265)
T ss_dssp GTTCCSCEEEESTTGGGBCS
T ss_pred hcCccCCEEEECCCcCCCCc
Confidence 89999999999999987653
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-48 Score=321.17 Aligned_cols=237 Identities=20% Similarity=0.248 Sum_probs=206.4
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc--C-CceEEEeccCCCHHHHHHHHHHH
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--G-LQVSGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~-~~~~~~~~D~~~~~~~~~~~~~~ 84 (263)
.+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++... + .++.++.+|++++++++++++++
T Consensus 2 ~~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 81 (250)
T 3nyw_A 2 SLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDI 81 (250)
T ss_dssp ---CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHH
T ss_pred cccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHH
Confidence 35788999999999999999999999999999999999999999998888754 3 67889999999999999999999
Q ss_pred HhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchh
Q 024752 85 SSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYA 164 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~ 164 (263)
.+++ +++|+||||||+....++ +.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|+
T Consensus 82 ~~~~-g~iD~lvnnAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~ 159 (250)
T 3nyw_A 82 HQKY-GAVDILVNAAAMFMDGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYG 159 (250)
T ss_dssp HHHH-CCEEEEEECCCCCCCCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTHHH
T ss_pred HHhc-CCCCEEEECCCcCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcchH
Confidence 9998 899999999999877777 77899999999999999999999999999988889999999999998777789999
Q ss_pred hHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCC
Q 024752 165 SSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244 (263)
Q Consensus 165 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~ 244 (263)
+||+++++|+++++.|++++||+||+|+||+++|++...... ..|..++.+|+|++++++||+++..
T Consensus 160 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-------------~~~~~~~~~p~dva~~v~~l~s~~~ 226 (250)
T 3nyw_A 160 STKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAGT-------------PFKDEEMIQPDDLLNTIRCLLNLSE 226 (250)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTTC-------------CSCGGGSBCHHHHHHHHHHHHTSCT
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcCC-------------CcccccCCCHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999998654322 2355677899999999999999654
Q ss_pred -CCccCcEEEeCCCcc
Q 024752 245 -SYVTGQVICVDGGYS 259 (263)
Q Consensus 245 -~~~~G~~i~~dgG~~ 259 (263)
.++++..|.+|||..
T Consensus 227 ~~~~~~~~i~vd~~~~ 242 (250)
T 3nyw_A 227 NVCIKDIVFEMKKSII 242 (250)
T ss_dssp TEECCEEEEEEHHHHH
T ss_pred ceEeeEEEEEeecccc
Confidence 468888999999864
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-48 Score=322.44 Aligned_cols=234 Identities=25% Similarity=0.401 Sum_probs=209.0
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
-+++++|++|||||++|||++++++|+++|++|++++|+.+..+ ..++.++.+|++++++++++++++.++
T Consensus 23 m~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 93 (260)
T 3un1_A 23 MMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA---------DPDIHTVAGDISKPETADRIVREGIER 93 (260)
T ss_dssp HHHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS---------STTEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred hhCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc---------cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 35688999999999999999999999999999999999876432 235889999999999999999999999
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc--CCCCcchhh
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA--IPMCSIYAS 165 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~--~~~~~~Y~~ 165 (263)
+ +++|+||||||+....++.+.+.++|++.+++|+.|+++++++++|.|++++.++||++||..+..+ .++...|++
T Consensus 94 ~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~ 172 (260)
T 3un1_A 94 F-GRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASL 172 (260)
T ss_dssp H-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCHHHHH
T ss_pred C-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccHHHHH
Confidence 8 8999999999998888888899999999999999999999999999999988899999999887643 345678999
Q ss_pred HHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCC
Q 024752 166 SKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245 (263)
Q Consensus 166 sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~ 245 (263)
||++++.|+++++.|++++||+||+|+||+|+|++.... .. .......|.+++.+|+|++++++|| +.++
T Consensus 173 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~-----~~---~~~~~~~p~~r~~~~~dva~av~~L--~~~~ 242 (260)
T 3un1_A 173 TKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAE-----TH---STLAGLHPVGRMGEIRDVVDAVLYL--EHAG 242 (260)
T ss_dssp HHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGG-----GH---HHHHTTSTTSSCBCHHHHHHHHHHH--HHCT
T ss_pred HHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHH-----HH---HHHhccCCCCCCcCHHHHHHHHHHh--cccC
Confidence 999999999999999999999999999999999987531 11 3344567899999999999999999 5678
Q ss_pred CccCcEEEeCCCcccc
Q 024752 246 YVTGQVICVDGGYSVT 261 (263)
Q Consensus 246 ~~~G~~i~~dgG~~~~ 261 (263)
++||+.|++|||+.++
T Consensus 243 ~itG~~i~vdGG~~~~ 258 (260)
T 3un1_A 243 FITGEILHVDGGQNAG 258 (260)
T ss_dssp TCCSCEEEESTTGGGC
T ss_pred CCCCcEEEECCCeecc
Confidence 9999999999999875
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-47 Score=320.47 Aligned_cols=243 Identities=20% Similarity=0.325 Sum_probs=206.4
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
+++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...+.++.++.+|++++++++++++++.+++ +
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g 80 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTW-G 80 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence 578999999999999999999999999999999999999999999998888889999999999999999999999998 8
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHH
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAM 170 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~ 170 (263)
++|+||||||+....++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+..+.++...|++||+++
T Consensus 81 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal 160 (264)
T 3tfo_A 81 RIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAV 160 (264)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHHHHHH
Confidence 99999999999888888899999999999999999999999999999988889999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCc
Q 024752 171 NQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQ 250 (263)
Q Consensus 171 ~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~ 250 (263)
++|+++++.|+ + ||+||+|+||+|+|++........... .. ......+.+|+|+|++++||+++...+.+|+
T Consensus 161 ~~l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~~~~~~~~-----~~-~~~~~~~~~pedvA~~v~~l~s~~~~~~~~~ 232 (264)
T 3tfo_A 161 RAISDGLRQES-T-NIRVTCVNPGVVESELAGTITHEETMA-----AM-DTYRAIALQPADIARAVRQVIEAPQSVDTTE 232 (264)
T ss_dssp HHHHHHHHHHC-S-SEEEEEEEECCC-----------------------------CCCHHHHHHHHHHHHHSCTTEEEEE
T ss_pred HHHHHHHHHhC-C-CCEEEEEecCCCcCcccccccchhHHH-----HH-HhhhccCCCHHHHHHHHHHHhcCCccCccce
Confidence 99999999998 5 999999999999999976543221110 00 0111235789999999999999999999999
Q ss_pred EEEeCCCccccC
Q 024752 251 VICVDGGYSVTG 262 (263)
Q Consensus 251 ~i~~dgG~~~~~ 262 (263)
.+..++|+.+.+
T Consensus 233 i~i~p~~~~~~~ 244 (264)
T 3tfo_A 233 ITIRPTASGNAE 244 (264)
T ss_dssp EEEEECC-----
T ss_pred EEEecCcccccc
Confidence 999999987643
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-47 Score=320.52 Aligned_cols=245 Identities=22% Similarity=0.326 Sum_probs=213.1
Q ss_pred CCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 11 LKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 11 ~~~k~vlVtGas--~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
+++|++|||||+ +|||++++++|+++|++|++++|+.+ .++..+++......+.++.+|++++++++++++++.+++
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 97 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENW 97 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 889999999999 99999999999999999999999985 444555554432347788999999999999999999998
Q ss_pred CCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchh
Q 024752 89 DGKLNILINNAGTFIP----KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYA 164 (263)
Q Consensus 89 ~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~ 164 (263)
+++|+||||||+... .++.+.+.++|++.+++|+.|+++++++++|.|+++ +|+||++||..+..+.++...|+
T Consensus 98 -g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~ 175 (285)
T 2p91_A 98 -GSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR-NGAIVTLSYYGAEKVVPHYNVMG 175 (285)
T ss_dssp -SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS-CCEEEEEECGGGTSBCTTTTHHH
T ss_pred -CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCEEEEEccchhccCCCCccHHH
Confidence 899999999998764 566778999999999999999999999999999764 58999999999998888899999
Q ss_pred hHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCC
Q 024752 165 SSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244 (263)
Q Consensus 165 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~ 244 (263)
+||++++.++++++.|++++||+||+|+||+|+|++....... .+....+....|.+++.+|+|++++++||+++.+
T Consensus 176 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---~~~~~~~~~~~p~~~~~~~~dva~~~~~l~s~~~ 252 (285)
T 2p91_A 176 IAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGF---HLLMEHTTKVNPFGKPITIEDVGDTAVFLCSDWA 252 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTH---HHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGG
T ss_pred HHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccch---HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCcc
Confidence 9999999999999999999999999999999999986543211 1122334456788899999999999999999988
Q ss_pred CCccCcEEEeCCCcccc
Q 024752 245 SYVTGQVICVDGGYSVT 261 (263)
Q Consensus 245 ~~~~G~~i~~dgG~~~~ 261 (263)
.+++|+.|.+|||+...
T Consensus 253 ~~~tG~~~~vdgg~~~~ 269 (285)
T 2p91_A 253 RAITGEVVHVDNGYHIM 269 (285)
T ss_dssp TTCCSCEEEESTTGGGB
T ss_pred cCCCCCEEEECCCcccc
Confidence 99999999999998764
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-47 Score=321.00 Aligned_cols=245 Identities=22% Similarity=0.287 Sum_probs=214.5
Q ss_pred CCCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 10 SLKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 10 ~~~~k~vlVtGas--~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
++++|+++||||+ +|||++++++|+++|++|++++|+.+ .++..+++......+.++.+|++++++++++++++.++
T Consensus 3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (275)
T 2pd4_A 3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD 81 (275)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3789999999999 99999999999999999999999986 44555555443234788999999999999999999999
Q ss_pred cCCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcch
Q 024752 88 FDGKLNILINNAGTFIP----KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIY 163 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y 163 (263)
+ +++|+||||||+... .++.+.+.++|++.+++|+.++++++++++|.|++ +|+||++||..+..+.++...|
T Consensus 82 ~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y 158 (275)
T 2pd4_A 82 L-GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN--GASVLTLSYLGSTKYMAHYNVM 158 (275)
T ss_dssp T-SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTCHHH
T ss_pred c-CCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEecchhcCCCCCchhh
Confidence 8 899999999998764 56778899999999999999999999999999975 5899999999999998899999
Q ss_pred hhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 164 ASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 164 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
++||++++.|+++++.|++++||+||+|+||+|+|++.......+ +....+....|++++.+|+|++++++||+++.
T Consensus 159 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~ 235 (275)
T 2pd4_A 159 GLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFR---MILKWNEINAPLRKNVSLEEVGNAGMYLLSSL 235 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHH---HHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccH---HHHHHHHhcCCcCCCCCHHHHHHHHHHHhCcc
Confidence 999999999999999999999999999999999999876532211 12233445678889999999999999999998
Q ss_pred CCCccCcEEEeCCCcccc
Q 024752 244 TSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 244 ~~~~~G~~i~~dgG~~~~ 261 (263)
+.+++|+.|.+|||+.+.
T Consensus 236 ~~~~tG~~~~vdgg~~~~ 253 (275)
T 2pd4_A 236 SSGVSGEVHFVDAGYHVM 253 (275)
T ss_dssp GTTCCSCEEEESTTGGGB
T ss_pred ccCCCCCEEEECCCcccC
Confidence 899999999999998764
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-48 Score=322.42 Aligned_cols=240 Identities=28% Similarity=0.427 Sum_probs=211.4
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
++++|+++||||++|||++++++|+++|++|++++|+++.+++..+++ ..++.++.+|++++++++++++++.+++
T Consensus 3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~- 78 (263)
T 2a4k_A 3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL---EAEAIAVVADVSDPKAVEAVFAEALEEF- 78 (263)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC---CSSEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence 478999999999999999999999999999999999998877766544 2568899999999999999999999998
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
+++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.| ++ .++||++||..+. +.++...|++||++
T Consensus 79 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~-~g~iv~isS~~~~-~~~~~~~Y~asK~a 155 (263)
T 2a4k_A 79 GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE-GGSLVLTGSVAGL-GAFGLAHYAAGKLG 155 (263)
T ss_dssp SCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT-TCEEEEECCCTTC-CHHHHHHHHHCSSH
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc-CCEEEEEecchhc-CCCCcHHHHHHHHH
Confidence 899999999999877788889999999999999999999999999999 54 7899999999988 77778899999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccC
Q 024752 170 MNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTG 249 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G 249 (263)
++.++++++.|++++||+||+|+||+++|++..... +. ....+....|.+++.+|+|+|++++||+++.+.+++|
T Consensus 156 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~---~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG 230 (263)
T 2a4k_A 156 VVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLP--PW---AWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITG 230 (263)
T ss_dssp HHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSC--HH---HHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcC--HH---HHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcC
Confidence 999999999999999999999999999999876431 11 1133445678889999999999999999998999999
Q ss_pred cEEEeCCCcccc
Q 024752 250 QVICVDGGYSVT 261 (263)
Q Consensus 250 ~~i~~dgG~~~~ 261 (263)
+.|.+|||+.+.
T Consensus 231 ~~i~vdgG~~~~ 242 (263)
T 2a4k_A 231 QALYVDGGRSIV 242 (263)
T ss_dssp CEEEESTTTTTC
T ss_pred CEEEECCCcccc
Confidence 999999998764
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-47 Score=315.98 Aligned_cols=240 Identities=30% Similarity=0.381 Sum_probs=216.0
Q ss_pred CcccccccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcC-CceEEEeccC--CCHHHH
Q 024752 1 MSDFREQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG-LQVSGSVCDL--KIRAQR 77 (263)
Q Consensus 1 ~~~~~~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~--~~~~~~ 77 (263)
|.++...+.++++|+++||||++|||++++++|+++|++|++++|+++.++++.+++...+ ..+.++.+|+ ++.+++
T Consensus 2 m~~~~~~~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~ 81 (247)
T 3i1j_A 2 MFDYSAHPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQY 81 (247)
T ss_dssp CCCCCCCTTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHH
T ss_pred CCCCCCCCccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHH
Confidence 6777778888999999999999999999999999999999999999999999999887654 4566777777 999999
Q ss_pred HHHHHHHHhhcCCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc
Q 024752 78 EKLMETVSSQFDGKLNILINNAGTFI-PKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA 156 (263)
Q Consensus 78 ~~~~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~ 156 (263)
.++++++.+.+ +++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+
T Consensus 82 ~~~~~~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~ 160 (247)
T 3i1j_A 82 RELAARVEHEF-GRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKG 160 (247)
T ss_dssp HHHHHHHHHHH-SCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSC
T ss_pred HHHHHHHHHhC-CCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCC
Confidence 99999999998 89999999999864 46778899999999999999999999999999999888899999999999999
Q ss_pred CCCCcchhhHHHHHHHHHHHHHHHHcc-CCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHH
Q 024752 157 IPMCSIYASSKVAMNQLTKNLACEWAK-DKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSV 235 (263)
Q Consensus 157 ~~~~~~Y~~sK~a~~~~~~~~a~e~~~-~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~ 235 (263)
.++...|++||++++.|+++++.|+++ .||+||+|+||+++|++........ +..+...|+|++++
T Consensus 161 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~~~-------------~~~~~~~p~dva~~ 227 (247)
T 3i1j_A 161 RANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYPDE-------------NPLNNPAPEDIMPV 227 (247)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHSTTS-------------CGGGSCCGGGGTHH
T ss_pred CCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhccccc-------------CccCCCCHHHHHHH
Confidence 999999999999999999999999986 8999999999999999865433221 12345679999999
Q ss_pred HHHHcCCCCCCccCcEEEe
Q 024752 236 VAFLCLSATSYVTGQVICV 254 (263)
Q Consensus 236 ~~~l~s~~~~~~~G~~i~~ 254 (263)
++||+++.++++|||.|++
T Consensus 228 ~~~l~s~~~~~itG~~i~~ 246 (247)
T 3i1j_A 228 YLYLMGPDSTGINGQALNA 246 (247)
T ss_dssp HHHHHSGGGTTCCSCEEEC
T ss_pred HHHHhCchhccccCeeecC
Confidence 9999999999999999986
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-47 Score=316.18 Aligned_cols=238 Identities=31% Similarity=0.444 Sum_probs=215.2
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
.++++|+++||||++|||++++++|+++|++|++++|+++..++..+++.. .+.++.+|++++++++++++++.+++
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~~ 79 (260)
T 1nff_A 3 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD---AARYVHLDVTQPAQWKAAVDTAVTAF 79 (260)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG---GEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc---CceEEEecCCCHHHHHHHHHHHHHHc
Confidence 357899999999999999999999999999999999999888777666532 47889999999999999999999998
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.++...|++||+
T Consensus 80 -g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 158 (260)
T 1nff_A 80 -GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKF 158 (260)
T ss_dssp -SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhHHHHHH
Confidence 8999999999998777788899999999999999999999999999999887899999999999999888999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCcc
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~ 248 (263)
+++.++++++.|++++||+||+|+||+++|++.. .. .. .+. ..|.+++.+|+|+++++++|+++.+.+++
T Consensus 159 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~~-~~-------~~~-~~~~~~~~~~~dvA~~v~~l~s~~~~~~~ 228 (260)
T 1nff_A 159 AVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-WV-PE-------DIF-QTALGRAAEPVEVSNLVVYLASDESSYST 228 (260)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-TS-CT-------TCS-CCSSSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-cc-hh-------hHH-hCccCCCCCHHHHHHHHHHHhCccccCCc
Confidence 9999999999999999999999999999999864 11 11 111 45778889999999999999999889999
Q ss_pred CcEEEeCCCccc
Q 024752 249 GQVICVDGGYSV 260 (263)
Q Consensus 249 G~~i~~dgG~~~ 260 (263)
|+.+++|||+.+
T Consensus 229 G~~~~v~gG~~~ 240 (260)
T 1nff_A 229 GAEFVVDGGTVA 240 (260)
T ss_dssp SCEEEESTTGGG
T ss_pred CCEEEECCCeec
Confidence 999999999875
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-47 Score=316.61 Aligned_cols=243 Identities=30% Similarity=0.461 Sum_probs=199.7
Q ss_pred ccccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHH
Q 024752 5 REQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 5 ~~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 84 (263)
...+.++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++. .++.++.+|+++.+++.++++++
T Consensus 6 ~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~ 82 (249)
T 3f9i_A 6 HHHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK---DNYTIEVCNLANKEECSNLISKT 82 (249)
T ss_dssp ---CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---SSEEEEECCTTSHHHHHHHHHTC
T ss_pred ccccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc---cCccEEEcCCCCHHHHHHHHHhc
Confidence 356678999999999999999999999999999999999999998888776653 46888999999999988887643
Q ss_pred HhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchh
Q 024752 85 SSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYA 164 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~ 164 (263)
+++|++|||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++.++||++||..+..+.++...|+
T Consensus 83 -----~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~ 157 (249)
T 3f9i_A 83 -----SNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYC 157 (249)
T ss_dssp -----SCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHHHH
T ss_pred -----CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCchhH
Confidence 689999999999887777788899999999999999999999999999988889999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCC
Q 024752 165 SSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244 (263)
Q Consensus 165 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~ 244 (263)
+||++++.++++++.|++++||++++|+||+++|++...... .....+....|.+++.+|+|+++++.||+++.+
T Consensus 158 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~ 232 (249)
T 3f9i_A 158 ASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNE-----KQREAIVQKIPLGTYGIPEDVAYAVAFLASNNA 232 (249)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCH-----HHHHHHHHHCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCH-----HHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCcc
Confidence 999999999999999999999999999999999998765432 122445566789999999999999999999999
Q ss_pred CCccCcEEEeCCCccc
Q 024752 245 SYVTGQVICVDGGYSV 260 (263)
Q Consensus 245 ~~~~G~~i~~dgG~~~ 260 (263)
.+++||.|++|||+.+
T Consensus 233 ~~~tG~~~~vdgG~~~ 248 (249)
T 3f9i_A 233 SYITGQTLHVNGGMLM 248 (249)
T ss_dssp TTCCSCEEEESTTSSC
T ss_pred CCccCcEEEECCCEee
Confidence 9999999999999875
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-46 Score=312.50 Aligned_cols=249 Identities=31% Similarity=0.490 Sum_probs=222.7
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
..+++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++...+.++.++.+|++++++++++++++.+
T Consensus 7 ~~~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (260)
T 3awd_A 7 EKLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHE 86 (260)
T ss_dssp GGGCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999999999988888888877677899999999999999999999999
Q ss_pred hcCCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCC--cch
Q 024752 87 QFDGKLNILINNAGTFI-PKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMC--SIY 163 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~--~~Y 163 (263)
.+ +++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.++. ..|
T Consensus 87 ~~-~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~Y 165 (260)
T 3awd_A 87 QE-GRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAY 165 (260)
T ss_dssp HH-SCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCCHHH
T ss_pred Hc-CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCCcccc
Confidence 98 79999999999877 567788899999999999999999999999999988778999999999988877766 889
Q ss_pred hhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccc-cccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCC
Q 024752 164 ASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLD-TVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS 242 (263)
Q Consensus 164 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~ 242 (263)
+++|++++.++++++.|++++||++++|+||+++|++.. ... .+.. ...+....|.+++.+|+|+++++.+|+++
T Consensus 166 ~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 241 (260)
T 3awd_A 166 NASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGME-KPEL---YDAWIAGTPMGRVGQPDEVASVVQFLASD 241 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHT-CHHH---HHHHHHTCTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccC-ChHH---HHHHHhcCCcCCCCCHHHHHHHHHHHhCc
Confidence 999999999999999999999999999999999999876 222 1111 23344556888899999999999999998
Q ss_pred CCCCccCcEEEeCCCccc
Q 024752 243 ATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 243 ~~~~~~G~~i~~dgG~~~ 260 (263)
...+++|+.+++|||+..
T Consensus 242 ~~~~~~G~~~~v~gg~~~ 259 (260)
T 3awd_A 242 AASLMTGAIVNVDAGFTV 259 (260)
T ss_dssp GGTTCCSCEEEESTTTTT
T ss_pred hhccCCCcEEEECCceec
Confidence 888999999999999864
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-47 Score=319.41 Aligned_cols=244 Identities=19% Similarity=0.193 Sum_probs=209.5
Q ss_pred CCCCCEEEEecC--CCchHHHHHHHHHHCCCeEEEeeCCchhH-HHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 10 SLKGMTALVTGG--TKGIGYAVVEELAAFGAIVHTCSRNETEL-NQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 10 ~~~~k~vlVtGa--s~giG~~~a~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
++++|+++|||| ++|||++++++|+++|++|++++|+.++. +++.++ .+.++.++.+|++++++++++++++.+
T Consensus 4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (269)
T 2h7i_A 4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDR---LPAKAPLLELDVQNEEHLASLAGRVTE 80 (269)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTT---SSSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHh---cCCCceEEEccCCCHHHHHHHHHHHHH
Confidence 478999999999 99999999999999999999999998653 444332 245678899999999999999999999
Q ss_pred hcCC---CccEEEeCCCCCC-----CCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCC
Q 024752 87 QFDG---KLNILINNAGTFI-----PKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIP 158 (263)
Q Consensus 87 ~~~~---~id~li~~ag~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~ 158 (263)
++ + ++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|++ +|+||++||... .+.+
T Consensus 81 ~~-g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~iss~~~-~~~~ 156 (269)
T 2h7i_A 81 AI-GAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP--GGSIVGMDFDPS-RAMP 156 (269)
T ss_dssp HH-CTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECCCS-SCCT
T ss_pred Hh-CCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCeEEEEcCccc-cccC
Confidence 98 6 8999999999876 456778899999999999999999999999999976 489999999876 6677
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccc---cchh----HHHHHHhHhcCCCC-CCCChh
Q 024752 159 MCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEK---DSNF----LEHANRMVLRTPML-RPGEPN 230 (263)
Q Consensus 159 ~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~---~~~~----~~~~~~~~~~~~~~-~~~~~~ 230 (263)
.+..|++||++++.|+++++.|++++||+||+|+||+++|++...... .+.. .+....+....|++ ++.+|+
T Consensus 157 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~rr~~~p~ 236 (269)
T 2h7i_A 157 AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDAT 236 (269)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCH
T ss_pred chHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCcccCCCCHH
Confidence 888999999999999999999999999999999999999998654311 1111 11112344567888 699999
Q ss_pred hHHHHHHHHcCCCCCCccCcEEEeCCCccc
Q 024752 231 EVSSVVAFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 231 ~va~~~~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
|+|++++||+++.++++|||.|.+|||+++
T Consensus 237 dvA~~v~~L~s~~~~~itG~~i~vdGG~~~ 266 (269)
T 2h7i_A 237 PVAKTVCALLSDWLPATTGDIIYADGGAHT 266 (269)
T ss_dssp HHHHHHHHHHSSSCTTCCSEEEEESTTGGG
T ss_pred HHHHHHHHHhCchhccCcceEEEecCCeee
Confidence 999999999999999999999999999875
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-47 Score=317.12 Aligned_cols=237 Identities=30% Similarity=0.451 Sum_probs=202.4
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
..++++|+++||||++|||++++++|+++|++|++++|+++..++ +..+.+|++++++++++++++.+.
T Consensus 10 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-----------~~~~~~D~~~~~~~~~~~~~~~~~ 78 (247)
T 1uzm_A 10 KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG-----------LFGVEVDVTDSDAVDRAFTAVEEH 78 (247)
T ss_dssp CCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-----------SEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH-----------hcCeeccCCCHHHHHHHHHHHHHH
Confidence 456889999999999999999999999999999999998765332 124789999999999999999999
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.++...|++||
T Consensus 79 ~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK 157 (247)
T 1uzm_A 79 Q-GPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASK 157 (247)
T ss_dssp H-SSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHH
T ss_pred c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChhHHHHH
Confidence 8 899999999999877778889999999999999999999999999999988789999999999998888899999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
++++.++++++.|++++||+||+|+||+++|++..... .. ....+....|.+++.+|+|++++++||+++.++++
T Consensus 158 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~---~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~ 232 (247)
T 1uzm_A 158 AGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALD--ER---IQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYI 232 (247)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSC--HH---HHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcC--HH---HHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCC
Confidence 99999999999999999999999999999999865432 11 11233445688899999999999999999888999
Q ss_pred cCcEEEeCCCcccc
Q 024752 248 TGQVICVDGGYSVT 261 (263)
Q Consensus 248 ~G~~i~~dgG~~~~ 261 (263)
+|+.|.+|||+.+.
T Consensus 233 ~G~~i~vdgG~~~~ 246 (247)
T 1uzm_A 233 SGAVIPVDGGMGMG 246 (247)
T ss_dssp CSCEEEESTTTTC-
T ss_pred cCCEEEECCCcccC
Confidence 99999999998754
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-47 Score=316.70 Aligned_cols=240 Identities=30% Similarity=0.446 Sum_probs=212.8
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
.++++|++|||||++|||++++++|+++|++|++++|+++. +.++.++.+|++++++++++++++.+++
T Consensus 4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 72 (264)
T 2dtx_A 4 SDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----------EAKYDHIECDVTNPDQVKASIDHIFKEY 72 (264)
T ss_dssp GGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----------SCSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----------CCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 35789999999999999999999999999999999998764 3467889999999999999999999998
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.++...|++||+
T Consensus 73 -g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 151 (264)
T 2dtx_A 73 -GSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKH 151 (264)
T ss_dssp -SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred -CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHHHHHH
Confidence 8999999999998877888899999999999999999999999999999887899999999999999899999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccc-----cc-hhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCC
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEK-----DS-NFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS 242 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~ 242 (263)
+++.|+++++.|+++. |+||+|+||+++|++...... .. ...+....+....|.+++.+|+|+|++++||+++
T Consensus 152 a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~ 230 (264)
T 2dtx_A 152 AVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASR 230 (264)
T ss_dssp HHHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 9999999999999988 999999999999998654311 11 0001123334457888999999999999999999
Q ss_pred CCCCccCcEEEeCCCcccc
Q 024752 243 ATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 243 ~~~~~~G~~i~~dgG~~~~ 261 (263)
.+++++|+.|.+|||+.++
T Consensus 231 ~~~~~tG~~i~vdGG~~~~ 249 (264)
T 2dtx_A 231 EASFITGTCLYVDGGLSIR 249 (264)
T ss_dssp GGTTCCSCEEEESTTGGGC
T ss_pred hhcCCCCcEEEECCCcccC
Confidence 8899999999999998764
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-47 Score=318.27 Aligned_cols=243 Identities=30% Similarity=0.393 Sum_probs=209.1
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEe-eCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTC-SRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
.++|++|||||++|||+++|++|+++|++|+++ +|+.+..+++.+++...+.++.++.+|++++++++++++++.+.+
T Consensus 24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~- 102 (272)
T 4e3z_A 24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF- 102 (272)
T ss_dssp CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC-
Confidence 458999999999999999999999999999776 888888888888888888889999999999999999999999998
Q ss_pred CCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC---CCceEEEEccccccccCC-CCcchh
Q 024752 90 GKLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA---GNGNIIFISSVAGVIAIP-MCSIYA 164 (263)
Q Consensus 90 ~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~~~iv~vsS~~~~~~~~-~~~~Y~ 164 (263)
+++|+||||||+... .++.+.+.++|++.+++|+.++++++++++|.|.+. +.++||++||..+..+.+ +...|+
T Consensus 103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~ 182 (272)
T 4e3z_A 103 GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYA 182 (272)
T ss_dssp SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHH
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhH
Confidence 899999999998865 677888999999999999999999999999999873 468999999999988766 567899
Q ss_pred hHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCC
Q 024752 165 SSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244 (263)
Q Consensus 165 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~ 244 (263)
+||++++.|+++++.|++++||+|++|+||+|+|++....... ..........|.+++.+|+|++++++||+++.+
T Consensus 183 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~edvA~~i~~l~s~~~ 258 (272)
T 4e3z_A 183 ASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLP----DRAREMAPSVPMQRAGMPEEVADAILYLLSPSA 258 (272)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC----------------------CCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCCh----HHHHHHhhcCCcCCCcCHHHHHHHHHHHhCCcc
Confidence 9999999999999999999999999999999999987542211 112344556788899999999999999999999
Q ss_pred CCccCcEEEeCCCc
Q 024752 245 SYVTGQVICVDGGY 258 (263)
Q Consensus 245 ~~~~G~~i~~dgG~ 258 (263)
.+++|+.|++|||.
T Consensus 259 ~~~tG~~i~vdgG~ 272 (272)
T 4e3z_A 259 SYVTGSILNVSGGR 272 (272)
T ss_dssp TTCCSCEEEESTTC
T ss_pred ccccCCEEeecCCC
Confidence 99999999999995
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-47 Score=311.29 Aligned_cols=235 Identities=34% Similarity=0.500 Sum_probs=208.9
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
+|+++||||++|||++++++|+++|++|++++|+++. ..+++ + +.++.+|+++ ++++++++++.+.+ +++
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~---~--~~~~~~D~~~-~~~~~~~~~~~~~~-g~i 71 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL---G--AVPLPTDLEK-DDPKGLVKRALEAL-GGL 71 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH---T--CEEEECCTTT-SCHHHHHHHHHHHH-TSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh---C--cEEEecCCch-HHHHHHHHHHHHHc-CCC
Confidence 6899999999999999999999999999999999876 23333 2 6788999999 99999999999988 899
Q ss_pred cEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC--CCCcchhhHHHHH
Q 024752 93 NILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI--PMCSIYASSKVAM 170 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~--~~~~~Y~~sK~a~ 170 (263)
|++|||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+. ++...|++||+++
T Consensus 72 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~ 151 (239)
T 2ekp_A 72 HVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTAL 151 (239)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHHHHHHH
Confidence 99999999987778888999999999999999999999999999998878999999999998877 7889999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCc
Q 024752 171 NQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQ 250 (263)
Q Consensus 171 ~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~ 250 (263)
+.++++++.|++++||++|+|+||+++|++.......+. ....+....|.+++.+|+|++++++||+++.+++++|+
T Consensus 152 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~---~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~ 228 (239)
T 2ekp_A 152 LGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPE---LYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTGQ 228 (239)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHH---HHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCCSC
T ss_pred HHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHH---HHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCC
Confidence 999999999999999999999999999998754321111 12334456788899999999999999999988999999
Q ss_pred EEEeCCCccc
Q 024752 251 VICVDGGYSV 260 (263)
Q Consensus 251 ~i~~dgG~~~ 260 (263)
.|.+|||+..
T Consensus 229 ~~~vdgG~~~ 238 (239)
T 2ekp_A 229 AVAVDGGFLA 238 (239)
T ss_dssp EEEESTTTTT
T ss_pred EEEECCCccc
Confidence 9999999864
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-47 Score=329.51 Aligned_cols=241 Identities=27% Similarity=0.332 Sum_probs=215.5
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCC----------chhHHHHHHHHHhcCCceEEEeccCCCHHHHHH
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN----------ETELNQRIQEWKSKGLQVSGSVCDLKIRAQREK 79 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~----------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 79 (263)
+++||++|||||++|||+++|++|+++|++|++++|+ .+..++..+++...+.++.++.+|+++++++.+
T Consensus 24 ~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 103 (322)
T 3qlj_A 24 VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAG 103 (322)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHH
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence 4889999999999999999999999999999999998 778888888888888889999999999999999
Q ss_pred HHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC------CceEEEEccccc
Q 024752 80 LMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG------NGNIIFISSVAG 153 (263)
Q Consensus 80 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~~~iv~vsS~~~ 153 (263)
+++++.+++ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.+.+ .|+||++||..+
T Consensus 104 ~~~~~~~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~ 182 (322)
T 3qlj_A 104 LIQTAVETF-GGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAG 182 (322)
T ss_dssp HHHHHHHHH-SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHH
T ss_pred HHHHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHH
Confidence 999999999 8999999999999888888999999999999999999999999999997532 379999999999
Q ss_pred cccCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHH
Q 024752 154 VIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVS 233 (263)
Q Consensus 154 ~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va 233 (263)
..+.++...|++||+|++.|+++++.|++++||+||+|+|| +.|++.......... ...+..++.+|+|++
T Consensus 183 ~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~~--------~~~~~~~~~~pedva 253 (322)
T 3qlj_A 183 LQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMMA--------TQDQDFDAMAPENVS 253 (322)
T ss_dssp HHCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC----------------CCTTCGGGTH
T ss_pred ccCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhhh--------ccccccCCCCHHHHH
Confidence 99999999999999999999999999999999999999999 999987654332110 111223457899999
Q ss_pred HHHHHHcCCCCCCccCcEEEeCCCccc
Q 024752 234 SVVAFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 234 ~~~~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
++++||+++.+.++||+.|++|||+..
T Consensus 254 ~~v~~L~s~~~~~itG~~i~vdGG~~~ 280 (322)
T 3qlj_A 254 PLVVWLGSAEARDVTGKVFEVEGGKIR 280 (322)
T ss_dssp HHHHHHTSGGGGGCCSCEEEEETTEEE
T ss_pred HHHHHHhCccccCCCCCEEEECCCccc
Confidence 999999999999999999999999865
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-48 Score=319.85 Aligned_cols=238 Identities=29% Similarity=0.451 Sum_probs=202.4
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
+.+++++|+++||||++|||++++++|+++|++|++++|+++.++ .+.++.+|++++++++++++++.+
T Consensus 15 ~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~Dl~d~~~v~~~~~~~~~ 83 (253)
T 2nm0_A 15 VPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-----------GFLAVKCDITDTEQVEQAYKEIEE 83 (253)
T ss_dssp -----CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----------TSEEEECCTTSHHHHHHHHHHHHH
T ss_pred CccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-----------cceEEEecCCCHHHHHHHHHHHHH
Confidence 456788999999999999999999999999999999999876532 267889999999999999999999
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhH
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASS 166 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s 166 (263)
++ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.++...|+++
T Consensus 84 ~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as 162 (253)
T 2nm0_A 84 TH-GPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAAS 162 (253)
T ss_dssp HT-CSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHHHHH
T ss_pred Hc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHHHHHH
Confidence 98 89999999999987777888899999999999999999999999999998778999999999998887788899999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
|++++.|+++++.|++++||+||+|+||+++|++...... ... ..+....|.+++.+|+|+|+.++||+++.+.+
T Consensus 163 K~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~--~~~---~~~~~~~p~~~~~~p~dvA~~i~~l~s~~~~~ 237 (253)
T 2nm0_A 163 KAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTD--EQR---ANIVSQVPLGRYARPEEIAATVRFLASDDASY 237 (253)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC-----------CH---HHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCH--HHH---HHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence 9999999999999999999999999999999998754321 111 22334568888999999999999999998899
Q ss_pred ccCcEEEeCCCcccc
Q 024752 247 VTGQVICVDGGYSVT 261 (263)
Q Consensus 247 ~~G~~i~~dgG~~~~ 261 (263)
++|+.|.+|||+.+.
T Consensus 238 ~tG~~i~vdGG~~~~ 252 (253)
T 2nm0_A 238 ITGAVIPVDGGLGMG 252 (253)
T ss_dssp CCSCEEEESTTTTCC
T ss_pred CcCcEEEECCccccC
Confidence 999999999998764
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-46 Score=313.31 Aligned_cols=248 Identities=32% Similarity=0.454 Sum_probs=221.9
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeC-CchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-NETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
++++|+++||||++|||++++++|+++|++|++++| +.+..+++.+++...+.++.++.+|+++++++.++++++.+.+
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (261)
T 1gee_A 4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF 83 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 478999999999999999999999999999999999 8888888888887767788999999999999999999999998
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccccccCCCCcchhhHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++ .++||++||..+..+.++...|+++|
T Consensus 84 -g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK 162 (261)
T 1gee_A 84 -GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASK 162 (261)
T ss_dssp -SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred -CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHHHHH
Confidence 7999999999998777777889999999999999999999999999999876 78999999999998888999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
++++.++++++.|++++||++++|+||+++|++.......+.. ...+....|.+++.+|+|+++++++|+++.+.++
T Consensus 163 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~ 239 (261)
T 1gee_A 163 GGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQ---RADVESMIPMGYIGEPEEIAAVAAWLASSEASYV 239 (261)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHH---HHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhH---HHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCC
Confidence 9999999999999999999999999999999987643222211 1333345678889999999999999999888899
Q ss_pred cCcEEEeCCCcccc
Q 024752 248 TGQVICVDGGYSVT 261 (263)
Q Consensus 248 ~G~~i~~dgG~~~~ 261 (263)
+|+.|++|||+++.
T Consensus 240 ~G~~~~v~gg~~~~ 253 (261)
T 1gee_A 240 TGITLFADGGMTLY 253 (261)
T ss_dssp CSCEEEESTTGGGC
T ss_pred CCcEEEEcCCcccC
Confidence 99999999998753
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-47 Score=328.73 Aligned_cols=237 Identities=21% Similarity=0.281 Sum_probs=214.7
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchh-------HHHHHHHHHhcCCceEEEeccCCCHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-------LNQRIQEWKSKGLQVSGSVCDLKIRAQRE 78 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 78 (263)
....+++||++|||||++|||++++++|+++|++|++++|+.++ +++..+++...+.++.++.+|++++++++
T Consensus 38 ~~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~ 117 (346)
T 3kvo_A 38 PNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQIS 117 (346)
T ss_dssp CCCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHH
T ss_pred ccCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHH
Confidence 34567999999999999999999999999999999999999875 56777788777888999999999999999
Q ss_pred HHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc--
Q 024752 79 KLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA-- 156 (263)
Q Consensus 79 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-- 156 (263)
++++++.+++ +++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++++.++||++||..+..+
T Consensus 118 ~~~~~~~~~~-g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~ 196 (346)
T 3kvo_A 118 AAVEKAIKKF-GGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVW 196 (346)
T ss_dssp HHHHHHHHHH-SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGG
T ss_pred HHHHHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCC
Confidence 9999999999 8999999999999888889999999999999999999999999999999988899999999998877
Q ss_pred CCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCc-ccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHH
Q 024752 157 IPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWV-IRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSV 235 (263)
Q Consensus 157 ~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~ 235 (263)
.++...|++||++++.|+++++.|++ .||+||+|+||+ ++|++...... ..+.+++.+|+|+|++
T Consensus 197 ~~~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~~~~~-------------~~~~~r~~~pedvA~~ 262 (346)
T 3kvo_A 197 FKQHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDMLGG-------------PGIESQCRKVDIIADA 262 (346)
T ss_dssp TSSSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHHHHCC---------------CGGGCBCTHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHHhhcc-------------ccccccCCCHHHHHHH
Confidence 67889999999999999999999999 899999999995 89987543221 2356677899999999
Q ss_pred HHHHcCCCCCCccCcEEEeCCCcc
Q 024752 236 VAFLCLSATSYVTGQVICVDGGYS 259 (263)
Q Consensus 236 ~~~l~s~~~~~~~G~~i~~dgG~~ 259 (263)
++||+++ ++++||+.+ +|||+.
T Consensus 263 v~~L~s~-~~~itG~~i-vdgg~~ 284 (346)
T 3kvo_A 263 AYSIFQK-PKSFTGNFV-IDENIL 284 (346)
T ss_dssp HHHHHTS-CTTCCSCEE-EHHHHH
T ss_pred HHHHHhc-CCCCCceEE-ECCcEe
Confidence 9999999 899999999 999964
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-47 Score=316.22 Aligned_cols=241 Identities=28% Similarity=0.403 Sum_probs=207.6
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
++++|+++||||++|||++++++|+++|++|++++|++++++++. ++ .++.++.+|++++++++++. +.+
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~----~~~~~~~~D~~~~~~~~~~~----~~~- 72 (246)
T 2ag5_A 3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY----PGIQTRVLDVTKKKQIDQFA----NEV- 72 (246)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS----TTEEEEECCTTCHHHHHHHH----HHC-
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc----cCceEEEeeCCCHHHHHHHH----HHh-
Confidence 478999999999999999999999999999999999987665543 22 25788999999999988443 445
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCC-CCcchhhHHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIP-MCSIYASSKV 168 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-~~~~Y~~sK~ 168 (263)
+++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.+ +...|++||+
T Consensus 73 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sK~ 152 (246)
T 2ag5_A 73 ERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKA 152 (246)
T ss_dssp SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHH
T ss_pred CCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccHHHHHH
Confidence 789999999999877778888999999999999999999999999999988789999999999988877 8889999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccc-cchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEK-DSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
+++.++++++.|++++||++|+|+||+++|++...... .....+....+....|.+++.+|+|+|++++||+++.+.++
T Consensus 153 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~ 232 (246)
T 2ag5_A 153 AVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYV 232 (246)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCC
Confidence 99999999999999999999999999999998654211 11111222334456788899999999999999999999999
Q ss_pred cCcEEEeCCCccc
Q 024752 248 TGQVICVDGGYSV 260 (263)
Q Consensus 248 ~G~~i~~dgG~~~ 260 (263)
||+.|.+|||+++
T Consensus 233 tG~~i~vdgG~~~ 245 (246)
T 2ag5_A 233 TGNPVIIDGGWSL 245 (246)
T ss_dssp CSCEEEECTTGGG
T ss_pred CCCEEEECCCccC
Confidence 9999999999864
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-47 Score=317.87 Aligned_cols=245 Identities=19% Similarity=0.230 Sum_probs=211.8
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
....++.+|++|||||++|||++++++|+++|++|++++|+.+.+++.. ...+.++.+|++++++++++++++.
T Consensus 9 ~m~~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~------~~~~~~~~~Dv~d~~~v~~~~~~~~ 82 (266)
T 3p19_A 9 QMGRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN------LPNTLCAQVDVTDKYTFDTAITRAE 82 (266)
T ss_dssp ------CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC------CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh------cCCceEEEecCCCHHHHHHHHHHHH
Confidence 3445688999999999999999999999999999999999987655432 2368889999999999999999999
Q ss_pred hhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhh
Q 024752 86 SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYAS 165 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~ 165 (263)
+.+ +++|+||||||+....++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+..+.++...|++
T Consensus 83 ~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~a 161 (266)
T 3p19_A 83 KIY-GPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCG 161 (266)
T ss_dssp HHH-CSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHH
T ss_pred HHC-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCchHHH
Confidence 998 8999999999998888888999999999999999999999999999999888899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCC
Q 024752 166 SKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245 (263)
Q Consensus 166 sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~ 245 (263)
||+++++|+++++.|++++||+||+|+||+|+|++......... .. .......|++++.+|+|+|++++||++....
T Consensus 162 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~-~~--~~~~~~~~~~r~~~pedvA~av~~l~~~~~~ 238 (266)
T 3p19_A 162 TKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQI-KD--GYDAWRVDMGGVLAADDVARAVLFAYQQPQN 238 (266)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHH-HH--HHHHHHHHTTCCBCHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhh-hH--HHHhhcccccCCCCHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999999999999999866533211 11 1111134788999999999999999999988
Q ss_pred CccCcEEEeCCCccc
Q 024752 246 YVTGQVICVDGGYSV 260 (263)
Q Consensus 246 ~~~G~~i~~dgG~~~ 260 (263)
.++++.+....++..
T Consensus 239 ~~~~~i~i~p~~~~~ 253 (266)
T 3p19_A 239 VCIREIALAPTKQQP 253 (266)
T ss_dssp EEEEEEEEEETTCCC
T ss_pred ccceeeEEecCCCCC
Confidence 899998887776654
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-46 Score=316.64 Aligned_cols=243 Identities=24% Similarity=0.376 Sum_probs=215.3
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
..+++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++ +.++.++.+|++++++++++++++ +
T Consensus 24 ~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~-~ 99 (281)
T 3ppi_A 24 TIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL---GNRAEFVSTNVTSEDSVLAAIEAA-N 99 (281)
T ss_dssp CCGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHH-T
T ss_pred hhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHH-H
Confidence 346789999999999999999999999999999999999999888887776 567899999999999999999999 7
Q ss_pred hcCCCccEEEeC-CCCCCCCCC-----CCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhh------CCCceEEEEcccccc
Q 024752 87 QFDGKLNILINN-AGTFIPKET-----TEFTEEDFSTVMTTNFESAYHLSQLAHPLLKS------AGNGNIIFISSVAGV 154 (263)
Q Consensus 87 ~~~~~id~li~~-ag~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~------~~~~~iv~vsS~~~~ 154 (263)
++ +++|++||| ||+.....+ .+.+.++|++.+++|+.++++++++++|.|.+ ++.|+||++||..+.
T Consensus 100 ~~-~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 178 (281)
T 3ppi_A 100 QL-GRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGY 178 (281)
T ss_dssp TS-SEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGT
T ss_pred Hh-CCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEeccccc
Confidence 77 799999999 665544443 36789999999999999999999999999987 567899999999999
Q ss_pred ccCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCC-CCCCChhhHH
Q 024752 155 IAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPM-LRPGEPNEVS 233 (263)
Q Consensus 155 ~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va 233 (263)
.+.++...|++||+|++.|+++++.|++++||+|++|+||+|+|++...... +....+....|. +++.+|+|+|
T Consensus 179 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-----~~~~~~~~~~~~~~~~~~pedvA 253 (281)
T 3ppi_A 179 EGQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGE-----EALAKFAANIPFPKRLGTPDEFA 253 (281)
T ss_dssp SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCH-----HHHHHHHHTCCSSSSCBCHHHHH
T ss_pred CCCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccH-----HHHHHHHhcCCCCCCCCCHHHHH
Confidence 9999999999999999999999999999999999999999999998765432 122445556677 8899999999
Q ss_pred HHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 234 SVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 234 ~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
++++||+++ .+++|+.|++|||++++
T Consensus 254 ~~v~~l~s~--~~~tG~~i~vdGG~~~~ 279 (281)
T 3ppi_A 254 DAAAFLLTN--GYINGEVMRLDGAQRFT 279 (281)
T ss_dssp HHHHHHHHC--SSCCSCEEEESTTCCCC
T ss_pred HHHHHHHcC--CCcCCcEEEECCCcccC
Confidence 999999985 68999999999999865
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-46 Score=309.66 Aligned_cols=244 Identities=28% Similarity=0.413 Sum_probs=217.6
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHH-HhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEW-KSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
+|+++||||++|||++++++|+++|++|++++|+++.+++..+++ ...+.++.++.+|++++++++++++++.+++ ++
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~ 80 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQF-GA 80 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHH-SC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-CC
Confidence 689999999999999999999999999999999998888887777 4445678999999999999999999999998 79
Q ss_pred ccEEEeCCCCCCCCC---CCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 92 LNILINNAGTFIPKE---TTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 92 id~li~~ag~~~~~~---~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+|+||||||.....+ +.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.++...|+++|+
T Consensus 81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~ 160 (250)
T 2cfc_A 81 IDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKG 160 (250)
T ss_dssp CCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCchhHHHHHH
Confidence 999999999876655 67789999999999999999999999999999887899999999999988889999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCcc
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~ 248 (263)
+++.++++++.|++++||++++|+||+++|++.......... ...+....|.+++.+|+|+++++++|+++...+++
T Consensus 161 a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~ 237 (250)
T 2cfc_A 161 AVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPEL---RDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVN 237 (250)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHH---HHHHHTTCTTCSCBCHHHHHHHHHHHHSTTCTTCC
T ss_pred HHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHH---HHHHHhcCCCCCCcCHHHHHHHHHHHcCchhhccc
Confidence 999999999999999999999999999999987542222111 13344457888899999999999999999888999
Q ss_pred CcEEEeCCCccc
Q 024752 249 GQVICVDGGYSV 260 (263)
Q Consensus 249 G~~i~~dgG~~~ 260 (263)
|+.|++|||++.
T Consensus 238 G~~~~v~gG~~~ 249 (250)
T 2cfc_A 238 GAALVMDGAYTA 249 (250)
T ss_dssp SCEEEESTTGGG
T ss_pred CCEEEECCceec
Confidence 999999999863
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-46 Score=309.99 Aligned_cols=247 Identities=32% Similarity=0.466 Sum_probs=219.2
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCce-EEEeccCCCHHHHHHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQV-SGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~ 84 (263)
+..|++++|+++||||++|||++++++|+++|++|++++|+++.+++..+++ +.++ .++.+|++++++++++++++
T Consensus 4 ~~~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (254)
T 2wsb_A 4 RTVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL---GAAVAARIVADVTDAEAMTAAAAEA 80 (254)
T ss_dssp TTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEEECCTTCHHHHHHHHHHH
T ss_pred ccccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cccceeEEEEecCCHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999999998887777666 3356 88999999999999999999
Q ss_pred HhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCC--cc
Q 024752 85 SSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMC--SI 162 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~--~~ 162 (263)
.+ + +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.+.. ..
T Consensus 81 ~~-~-~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~ 158 (254)
T 2wsb_A 81 EA-V-APVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASS 158 (254)
T ss_dssp HH-H-SCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCBHH
T ss_pred Hh-h-CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCcchH
Confidence 88 7 78999999999987777888899999999999999999999999999998888999999999988887777 88
Q ss_pred hhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCC
Q 024752 163 YASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS 242 (263)
Q Consensus 163 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~ 242 (263)
|+++|++++.++++++.|++++||++++|+||+++|++.......+.. ...+....|.+++.+|+|+++++++|+++
T Consensus 159 Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 235 (254)
T 2wsb_A 159 YMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPEL---FETWLDMTPMGRCGEPSEIAAAALFLASP 235 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHH---HHHHHHTSTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHH---HHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence 999999999999999999999999999999999999987644322222 23344456888899999999999999998
Q ss_pred CCCCccCcEEEeCCCccc
Q 024752 243 ATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 243 ~~~~~~G~~i~~dgG~~~ 260 (263)
.+.+++|+.+++|||++.
T Consensus 236 ~~~~~~G~~~~v~gG~~~ 253 (254)
T 2wsb_A 236 AASYVTGAILAVDGGYTV 253 (254)
T ss_dssp GGTTCCSCEEEESTTGGG
T ss_pred ccccccCCEEEECCCEec
Confidence 888999999999999864
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-46 Score=314.66 Aligned_cols=248 Identities=28% Similarity=0.420 Sum_probs=220.2
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
..+++++|+++||||++|||++++++|+++|++|++++|+++.++++.+++...+.++.++.+|++++++++++++++.+
T Consensus 38 ~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 117 (285)
T 2c07_A 38 YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILT 117 (285)
T ss_dssp CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHH
Confidence 34568899999999999999999999999999999999999988888888877677899999999999999999999999
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhH
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASS 166 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s 166 (263)
.+ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.++...|+++
T Consensus 118 ~~-~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~as 196 (285)
T 2c07_A 118 EH-KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSS 196 (285)
T ss_dssp HC-SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHH
T ss_pred hc-CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCCchHHHH
Confidence 98 78999999999987778888999999999999999999999999999988778999999999998888899999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
|++++.++++++.|+++.||++++|+||+++|++..... +.. ...+....|.+++.+|+|+|+++++|+++.+.+
T Consensus 197 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~---~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~ 271 (285)
T 2c07_A 197 KAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKIS--EQI---KKNIISNIPAGRMGTPEEVANLACFLSSDKSGY 271 (285)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CC--HHH---HHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcC--HHH---HHHHHhhCCCCCCCCHHHHHHHHHHHhCCCcCC
Confidence 999999999999999999999999999999999875432 111 133344567888999999999999999988889
Q ss_pred ccCcEEEeCCCccc
Q 024752 247 VTGQVICVDGGYSV 260 (263)
Q Consensus 247 ~~G~~i~~dgG~~~ 260 (263)
++|+.|++|||+++
T Consensus 272 ~~G~~i~v~gG~~~ 285 (285)
T 2c07_A 272 INGRVFVIDGGLSP 285 (285)
T ss_dssp CCSCEEEESTTSCC
T ss_pred CCCCEEEeCCCccC
Confidence 99999999999863
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-47 Score=313.16 Aligned_cols=236 Identities=29% Similarity=0.348 Sum_probs=207.4
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHH-CCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAA-FGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
.++|++|||||++|||++++++|++ .|++|++.+|+++. ....+.++.+|++++++++++++.+. +
T Consensus 2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~----------~~~~~~~~~~Dv~~~~~v~~~~~~~~--~- 68 (244)
T 4e4y_A 2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF----------SAENLKFIKADLTKQQDITNVLDIIK--N- 68 (244)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC----------CCTTEEEEECCTTCHHHHHHHHHHTT--T-
T ss_pred CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc----------ccccceEEecCcCCHHHHHHHHHHHH--h-
Confidence 4689999999999999999999999 78999999998752 12346889999999999999996554 4
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
+++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|+++ ++||++||..+..+.++...|++||++
T Consensus 69 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--g~iv~~sS~~~~~~~~~~~~Y~asKaa 146 (244)
T 4e4y_A 69 VSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG--ASIVFNGSDQCFIAKPNSFAYTLSKGA 146 (244)
T ss_dssp CCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE--EEEEEECCGGGTCCCTTBHHHHHHHHH
T ss_pred CCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC--cEEEEECCHHHccCCCCCchhHHHHHH
Confidence 689999999999888888899999999999999999999999999999774 899999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccc------hhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 170 MNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDS------NFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
++.|+++++.|++++||+||+|+||+|+|++........ ...+.........|.+++.+|+|+|++++||+++.
T Consensus 147 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~ 226 (244)
T 4e4y_A 147 IAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDK 226 (244)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhcCc
Confidence 999999999999999999999999999999876543221 11123344566789999999999999999999999
Q ss_pred CCCccCcEEEeCCCcccc
Q 024752 244 TSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 244 ~~~~~G~~i~~dgG~~~~ 261 (263)
+.++||+.|++|||++++
T Consensus 227 ~~~itG~~i~vdGG~~~~ 244 (244)
T 4e4y_A 227 SKFMTGGLIPIDGGYTAQ 244 (244)
T ss_dssp GTTCCSCEEEESTTGGGC
T ss_pred cccccCCeEeECCCccCC
Confidence 999999999999999763
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-46 Score=310.68 Aligned_cols=236 Identities=28% Similarity=0.387 Sum_probs=208.5
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
.++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++.+|+++++++.++++++.+.+
T Consensus 25 ~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 104 (262)
T 3rkr_A 25 SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAH 104 (262)
T ss_dssp CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence 45899999999999999999999999999999999999999999999998888889999999999999999999999998
Q ss_pred CCCccEEEeCCCCC-CCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 89 DGKLNILINNAGTF-IPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 89 ~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+++|+||||||+. ...++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+..+.++...|++||
T Consensus 105 -g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 183 (262)
T 3rkr_A 105 -GRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASK 183 (262)
T ss_dssp -SCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHHHHHH
T ss_pred -CCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchHHHHH
Confidence 8999999999984 45677888999999999999999999999999999988889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
++++.|+++++.|++++||+|++|+||+++|++...... ..+..++.+|+|+|+++.||+++...++
T Consensus 184 aa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-------------~~~~~~~~~p~dvA~~v~~l~s~~~~~~ 250 (262)
T 3rkr_A 184 WGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSA-------------KKSALGAIEPDDIADVVALLATQADQSF 250 (262)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------------------------CCCHHHHHHHHHHHHTCCTTCC
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccccc-------------ccccccCCCHHHHHHHHHHHhcCccccc
Confidence 999999999999999999999999999999998654322 1245567799999999999999999999
Q ss_pred cCcEEEeCCCc
Q 024752 248 TGQVICVDGGY 258 (263)
Q Consensus 248 ~G~~i~~dgG~ 258 (263)
+|+.+..+.+.
T Consensus 251 ~g~~~i~p~~~ 261 (262)
T 3rkr_A 251 ISEVLVRPTLK 261 (262)
T ss_dssp EEEEEEECCCC
T ss_pred cCcEEeccccC
Confidence 99999888764
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-46 Score=308.34 Aligned_cols=249 Identities=33% Similarity=0.491 Sum_probs=223.7
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
+.+++++|+++||||++|||++++++|+++|++|++++|+++..++..+++...+.++.++.+|++++++++++++++.+
T Consensus 5 ~~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 84 (255)
T 1fmc_A 5 DNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAIS 84 (255)
T ss_dssp GGGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 46779999999999999999999999999999999999999988888888877777889999999999999999999999
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhH
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASS 166 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s 166 (263)
.+ +++|+||||||.....++ +.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.++...|+++
T Consensus 85 ~~-~~~d~vi~~Ag~~~~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s 162 (255)
T 1fmc_A 85 KL-GKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASS 162 (255)
T ss_dssp HH-SSCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHH
T ss_pred hc-CCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCcccHHH
Confidence 88 799999999998876665 6889999999999999999999999999988878999999999999888889999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
|++++.++++++.|++++||++++|+||+++|++...... +.. ........|.+++.+|+|+++++++++++...+
T Consensus 163 K~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~ 238 (255)
T 1fmc_A 163 KAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVIT-PEI---EQKMLQHTPIRRLGQPQDIANAALFLCSPAASW 238 (255)
T ss_dssp HHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCC-HHH---HHHHHHTCSSCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccC-hHH---HHHHHhcCCcccCCCHHHHHHHHHHHhCCcccc
Confidence 9999999999999999999999999999999998654321 111 233444678888999999999999999988888
Q ss_pred ccCcEEEeCCCcccc
Q 024752 247 VTGQVICVDGGYSVT 261 (263)
Q Consensus 247 ~~G~~i~~dgG~~~~ 261 (263)
++|+.+++|||...+
T Consensus 239 ~~G~~~~v~gg~~~s 253 (255)
T 1fmc_A 239 VSGQILTVSGGGVQE 253 (255)
T ss_dssp CCSCEEEESTTSCCC
T ss_pred CCCcEEEECCceecc
Confidence 999999999998765
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-46 Score=309.93 Aligned_cols=246 Identities=35% Similarity=0.533 Sum_probs=198.6
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEe-eCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTC-SRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
|++++|+++||||++|||++++++|+++|++|+++ +|+++..++..+++...+.++.++.+|++++++++++++++.+.
T Consensus 1 M~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (247)
T 2hq1_A 1 MQLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDA 80 (247)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence 46789999999999999999999999999999998 78888888888888777778999999999999999999999999
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.++...|+++|
T Consensus 81 ~-~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK 159 (247)
T 2hq1_A 81 F-GRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASK 159 (247)
T ss_dssp H-SCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CHHHHHHH
T ss_pred c-CCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcHhHHHH
Confidence 8 799999999998877777778899999999999999999999999999887789999999998888888899999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
++++.++++++.|++++||++++++||+++|++..... .. ....+....|..++.+|+|+++++.+++++.+.++
T Consensus 160 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~---~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~ 234 (247)
T 2hq1_A 160 AGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLP--DK---VKEMYLNNIPLKRFGTPEEVANVVGFLASDDSNYI 234 (247)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC--HH---HHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcc--hH---HHHHHHhhCCCCCCCCHHHHHHHHHHHcCcccccc
Confidence 99999999999999999999999999999999865432 11 11333445678889999999999999999888889
Q ss_pred cCcEEEeCCCccc
Q 024752 248 TGQVICVDGGYSV 260 (263)
Q Consensus 248 ~G~~i~~dgG~~~ 260 (263)
+|+.+++|||+++
T Consensus 235 ~G~~~~v~gG~~~ 247 (247)
T 2hq1_A 235 TGQVINIDGGLVM 247 (247)
T ss_dssp CSCEEEESTTC--
T ss_pred cCcEEEeCCCccC
Confidence 9999999999863
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-46 Score=306.21 Aligned_cols=238 Identities=22% Similarity=0.333 Sum_probs=210.4
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
++++|+++||||++|||++++++|+++|++|++++|+++.++++.+++...+.++.++.+|++++++++++++++.+.+
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~- 82 (247)
T 2jah_A 4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEAL- 82 (247)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence 5789999999999999999999999999999999999999988888887767789999999999999999999999998
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
+++|+||||||+....++.+.+.++|++.+++|+.|+++++++++|.|++++ |+||++||..+..+.++...|++||++
T Consensus 83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a 161 (247)
T 2jah_A 83 GGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNAAVYQATKFG 161 (247)
T ss_dssp SCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTTCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCCCcHHHHHHHH
Confidence 8999999999998778888899999999999999999999999999998876 999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCC--CChhhHHHHHHHHcCCCCCCc
Q 024752 170 MNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRP--GEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~va~~~~~l~s~~~~~~ 247 (263)
++.|+++++.|++++||+||+|+||+++|++...... .... ... ...| ++. .+|+|++++++||+++.+.++
T Consensus 162 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~---~~~-~~~~-~~~~~~~pedvA~~v~~l~s~~~~~~ 235 (247)
T 2jah_A 162 VNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITH-TATK---EMY-EQRI-SQIRKLQAQDIAEAVRYAVTAPHHAT 235 (247)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCC-HHHH---HHH-HHHT-TTSCCBCHHHHHHHHHHHHHSCTTEE
T ss_pred HHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccc-hhhH---HHH-Hhcc-cccCCCCHHHHHHHHHHHhCCCccCc
Confidence 9999999999999999999999999999998754321 1111 111 1223 444 899999999999999888888
Q ss_pred cCcEEEeCC
Q 024752 248 TGQVICVDG 256 (263)
Q Consensus 248 ~G~~i~~dg 256 (263)
+++. .+++
T Consensus 236 ~~~i-~i~~ 243 (247)
T 2jah_A 236 VHEI-FIRP 243 (247)
T ss_dssp EEEE-EEEE
T ss_pred cceE-EecC
Confidence 7764 4544
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-46 Score=310.13 Aligned_cols=233 Identities=23% Similarity=0.282 Sum_probs=205.3
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEe-e--CCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTC-S--RNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~-~--r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
+|+++||||++|||++++++|+++|++|+++ + |+++.+++..+++ .+ .|+.++++++++++++.+++
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~--~~-------~~~~~~~~v~~~~~~~~~~~- 70 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN--PG-------TIALAEQKPERLVDATLQHG- 70 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS--TT-------EEECCCCCGGGHHHHHGGGS-
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh--CC-------CcccCHHHHHHHHHHHHHHc-
Confidence 5899999999999999999999999999999 6 9998887776665 11 23347778889999999998
Q ss_pred CCccEEEeCCCCCCC---CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhH
Q 024752 90 GKLNILINNAGTFIP---KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASS 166 (263)
Q Consensus 90 ~~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s 166 (263)
+++|+||||||+... .++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|++|
T Consensus 71 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as 150 (244)
T 1zmo_A 71 EAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPA 150 (244)
T ss_dssp SCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTHHHH
T ss_pred CCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHHHHH
Confidence 899999999999877 78889999999999999999999999999999998888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcc---ccccccchhHHHHHHhHh-cCCCCCCCChhhHHHHHHHHcCC
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLL---DTVEKDSNFLEHANRMVL-RTPMLRPGEPNEVSSVVAFLCLS 242 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~va~~~~~l~s~ 242 (263)
|++++.|+++++.|++++||+||+|+||+++|++. ...... .. ...+.. ..|++++.+|+|+|++++||+++
T Consensus 151 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~-~~---~~~~~~~~~p~~r~~~pe~vA~~v~~l~s~ 226 (244)
T 1zmo_A 151 RAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENN-PE---LRERVDRDVPLGRLGRPDEMGALITFLASR 226 (244)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHC-HH---HHHHHHHHCTTCSCBCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccch-HH---HHHHHhcCCCCCCCcCHHHHHHHHHHHcCc
Confidence 99999999999999999999999999999999987 443211 11 122333 57889999999999999999999
Q ss_pred CCCCccCcEEEeCCCcc
Q 024752 243 ATSYVTGQVICVDGGYS 259 (263)
Q Consensus 243 ~~~~~~G~~i~~dgG~~ 259 (263)
.++++||+.|.+|||++
T Consensus 227 ~~~~~tG~~i~vdgG~~ 243 (244)
T 1zmo_A 227 RAAPIVGQFFAFTGGYL 243 (244)
T ss_dssp TTGGGTTCEEEESTTCC
T ss_pred cccCccCCEEEeCCCCC
Confidence 99999999999999975
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-46 Score=313.12 Aligned_cols=244 Identities=20% Similarity=0.209 Sum_probs=210.8
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHH---CCCeEEEeeCCchhHHHHHHHHHhc--CCceEEEeccCCCHHHHHHHHHH
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAA---FGAIVHTCSRNETELNQRIQEWKSK--GLQVSGSVCDLKIRAQREKLMET 83 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~---~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~ 83 (263)
.++++|++|||||++|||++++++|++ +|++|++++|+++.++++.+++... +.++.++.+|+++++++++++++
T Consensus 2 ~~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 81 (259)
T 1oaa_A 2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA 81 (259)
T ss_dssp CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHH
Confidence 467899999999999999999999999 8999999999999998888888654 56789999999999999999999
Q ss_pred HHh--hcCCCcc--EEEeCCCCCCC--CCCCC-CCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC--CCceEEEEcccccc
Q 024752 84 VSS--QFDGKLN--ILINNAGTFIP--KETTE-FTEEDFSTVMTTNFESAYHLSQLAHPLLKSA--GNGNIIFISSVAGV 154 (263)
Q Consensus 84 ~~~--~~~~~id--~li~~ag~~~~--~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~iv~vsS~~~~ 154 (263)
+.+ .+ +++| +||||||+... .++.+ .+.++|++.+++|+.|+++++++++|.|+++ +.|+||++||..+.
T Consensus 82 ~~~~~~~-g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~ 160 (259)
T 1oaa_A 82 VRELPRP-EGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL 160 (259)
T ss_dssp HHHSCCC-TTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGT
T ss_pred HHhcccc-ccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhc
Confidence 988 55 6788 99999998654 45666 6899999999999999999999999999886 56899999999999
Q ss_pred ccCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHH
Q 024752 155 IAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSS 234 (263)
Q Consensus 155 ~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~ 234 (263)
.+.++...|++||+++++|+++++.|+++ |+||+|+||+++|++...........+....+....|.+++.+|+|+|+
T Consensus 161 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~ 238 (259)
T 1oaa_A 161 QPYKGWGLYCAGKAARDMLYQVLAAEEPS--VRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQ 238 (259)
T ss_dssp SCCTTCHHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHH
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHhhCCC--ceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhhcCCcCCHHHHHH
Confidence 99999999999999999999999999974 9999999999999987543211000111133344557888999999999
Q ss_pred HHHHHcCCCCCCccCcEEEeCC
Q 024752 235 VVAFLCLSATSYVTGQVICVDG 256 (263)
Q Consensus 235 ~~~~l~s~~~~~~~G~~i~~dg 256 (263)
.++||+++ .+++||+.|.+||
T Consensus 239 ~v~~l~~~-~~~itG~~i~vdg 259 (259)
T 1oaa_A 239 KLLGLLQK-DTFQSGAHVDFYD 259 (259)
T ss_dssp HHHHHHHH-CCSCTTEEEETTC
T ss_pred HHHHHHhh-ccccCCcEEeccC
Confidence 99999986 6899999999986
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-45 Score=305.62 Aligned_cols=245 Identities=30% Similarity=0.462 Sum_probs=218.1
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
++++|+++||||++|||++++++|+++|++|++++|+++..++..+++... .++.++.+|+++++++.++++++.+.+
T Consensus 3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~- 80 (251)
T 1zk4_A 3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP-DQIQFFQHDSSDEDGWTKLFDATEKAF- 80 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc-CceEEEECCCCCHHHHHHHHHHHHHHh-
Confidence 578999999999999999999999999999999999998887777666432 568899999999999999999999998
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCC-ceEEEEccccccccCCCCcchhhHHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGN-GNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|.|++++. ++||++||..+..+.++...|+++|+
T Consensus 81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~ 160 (251)
T 1zk4_A 81 GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKG 160 (251)
T ss_dssp SSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchHHHH
Confidence 89999999999987777888999999999999999999999999999988776 89999999999998889999999999
Q ss_pred HHHHHHHHHHHHHc--cCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 169 AMNQLTKNLACEWA--KDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 169 a~~~~~~~~a~e~~--~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
+++.++++++.|+. ++||++++|+||+++|++...... . ..........|.+++.+|+|+++++++|+++...+
T Consensus 161 a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~ 236 (251)
T 1zk4_A 161 AVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPG-A---EEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKF 236 (251)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTT-H---HHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCc-h---hhhHHHhhcCCCCCCcCHHHHHHHHHHHcCccccc
Confidence 99999999999998 889999999999999998765321 1 11122334567788899999999999999988889
Q ss_pred ccCcEEEeCCCccc
Q 024752 247 VTGQVICVDGGYSV 260 (263)
Q Consensus 247 ~~G~~i~~dgG~~~ 260 (263)
++|+.+++|||+++
T Consensus 237 ~~G~~~~v~gG~~~ 250 (251)
T 1zk4_A 237 ATGSEFVVDGGYTA 250 (251)
T ss_dssp CCSCEEEESTTGGG
T ss_pred ccCcEEEECCCccC
Confidence 99999999999875
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-46 Score=314.79 Aligned_cols=242 Identities=24% Similarity=0.293 Sum_probs=200.9
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCc-eEEEeccCCCHHHHHHHHHHHH
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQ-VSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
...+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+.. +.++.+|++|+++++++++++.
T Consensus 27 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 106 (281)
T 4dry_A 27 GKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVR 106 (281)
T ss_dssp -------CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 345689999999999999999999999999999999999999999988888765433 5889999999999999999999
Q ss_pred hhcCCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC--CceEEEEccccccccCCCCcc
Q 024752 86 SQFDGKLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG--NGNIIFISSVAGVIAIPMCSI 162 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~vsS~~~~~~~~~~~~ 162 (263)
+++ +++|+||||||+... .++.+.+.++|++.+++|+.|+++++++++|.|++++ .|+||++||..+..+.++...
T Consensus 107 ~~~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~ 185 (281)
T 4dry_A 107 AEF-ARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAP 185 (281)
T ss_dssp HHH-SCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHH
T ss_pred HHc-CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChh
Confidence 998 899999999998765 6788899999999999999999999999999999875 689999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCC
Q 024752 163 YASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS 242 (263)
Q Consensus 163 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~ 242 (263)
|++||+|+++|+++++.|++++||+||+|+||+|+|++........ .......+..++.+|+|+|++++||++.
T Consensus 186 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~------~~~~~~~~~~~~~~pedvA~~v~fL~s~ 259 (281)
T 4dry_A 186 YTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGV------LQANGEVAAEPTIPIEHIAEAVVYMASL 259 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEE------ECTTSCEEECCCBCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchh------hhhhhcccccCCCCHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999976543221 1111234567788999999999999995
Q ss_pred CCC-CccCcEEEeC
Q 024752 243 ATS-YVTGQVICVD 255 (263)
Q Consensus 243 ~~~-~~~G~~i~~d 255 (263)
... .+++..|.-.
T Consensus 260 ~~~~~i~~~~i~p~ 273 (281)
T 4dry_A 260 PLSANVLTMTVMAT 273 (281)
T ss_dssp CTTEEEEEEEEEET
T ss_pred CccCccccEEEEec
Confidence 544 4555555433
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-46 Score=305.93 Aligned_cols=242 Identities=27% Similarity=0.415 Sum_probs=217.3
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEE-eeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHT-CSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
||+++||||++|||++++++|+++|++|++ .+|+++..+++.+++...+.++.++.+|++++++++++++++.+.+ ++
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~ 79 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW-GT 79 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS-SC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHc-CC
Confidence 689999999999999999999999999998 5899888888888877667788999999999999999999999998 89
Q ss_pred ccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHH
Q 024752 92 LNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMN 171 (263)
Q Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~ 171 (263)
+|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.++...|+++|++++
T Consensus 80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 159 (244)
T 1edo_A 80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVI 159 (244)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccchhhHHHHH
Confidence 99999999998777778889999999999999999999999999999877899999999999888888999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHc-CCCCCCccCc
Q 024752 172 QLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC-LSATSYVTGQ 250 (263)
Q Consensus 172 ~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~-s~~~~~~~G~ 250 (263)
.++++++.|++++||++++|+||+++|++...... .. ........|.+++.+|+|+++++++|+ ++.+.+++|+
T Consensus 160 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~---~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~~G~ 234 (244)
T 1edo_A 160 GFSKTAAREGASRNINVNVVCPGFIASDMTAKLGE--DM---EKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQ 234 (244)
T ss_dssp HHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCH--HH---HHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSC
T ss_pred HHHHHHHHHhhhcCCEEEEEeeCccccchhhhcCh--HH---HHHHhhcCCCCCCCCHHHHHHHHHHHhCCCccCCcCCC
Confidence 99999999999999999999999999998754321 11 133344568888999999999999998 7778899999
Q ss_pred EEEeCCCccc
Q 024752 251 VICVDGGYSV 260 (263)
Q Consensus 251 ~i~~dgG~~~ 260 (263)
.+++|||+++
T Consensus 235 ~~~v~gG~~~ 244 (244)
T 1edo_A 235 AFTIDGGIAI 244 (244)
T ss_dssp EEEESTTTTC
T ss_pred EEEeCCCccC
Confidence 9999999863
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-45 Score=305.02 Aligned_cols=245 Identities=31% Similarity=0.423 Sum_probs=219.3
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHh-cCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS-KGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
+++++|+++||||++|||++++++|+++|++|++++|+++..++..+++.. .+.++.++.+|++++++++++++++.+.
T Consensus 3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (248)
T 2pnf_A 3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNL 82 (248)
T ss_dssp CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 568899999999999999999999999999999999999888888777765 4667899999999999999999999999
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.++...|+++|
T Consensus 83 ~-~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK 161 (248)
T 2pnf_A 83 V-DGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTK 161 (248)
T ss_dssp S-SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred c-CCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCCchHHHHH
Confidence 8 899999999998877777788999999999999999999999999999988789999999998888888889999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
++++.++++++.|+.++||++++++||+++|++..... ... ...+....|.+++.+|+|+++++.+++++...++
T Consensus 162 ~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~--~~~---~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~ 236 (248)
T 2pnf_A 162 AGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLS--EEI---KQKYKEQIPLGRFGSPEEVANVVLFLCSELASYI 236 (248)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC--HHH---HHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhcc--HHH---HHHHHhcCCCCCccCHHHHHHHHHHHhCchhhcC
Confidence 99999999999999999999999999999999875432 111 1233345677888999999999999999888899
Q ss_pred cCcEEEeCCCcc
Q 024752 248 TGQVICVDGGYS 259 (263)
Q Consensus 248 ~G~~i~~dgG~~ 259 (263)
+|+.+++|||+.
T Consensus 237 ~G~~~~v~gg~~ 248 (248)
T 2pnf_A 237 TGEVIHVNGGMF 248 (248)
T ss_dssp CSCEEEESTTCC
T ss_pred CCcEEEeCCCcC
Confidence 999999999973
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-45 Score=307.33 Aligned_cols=245 Identities=26% Similarity=0.381 Sum_probs=210.3
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
.+.|++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++ +.++.++.+|++++++++++++++.
T Consensus 5 ~~~~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (265)
T 2o23_A 5 AACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAK 81 (265)
T ss_dssp ---CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccccCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999999998888777665 4578999999999999999999999
Q ss_pred hhcCCCccEEEeCCCCCCCCCCC------CCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC------CCceEEEEccccc
Q 024752 86 SQFDGKLNILINNAGTFIPKETT------EFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA------GNGNIIFISSVAG 153 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~~~iv~vsS~~~ 153 (263)
+.+ +++|+||||||+....++. +.+.++|++.+++|+.++++++++++|.|+++ +.++||++||..+
T Consensus 82 ~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~ 160 (265)
T 2o23_A 82 GKF-GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAA 160 (265)
T ss_dssp HHH-SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHH
T ss_pred HHC-CCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhh
Confidence 998 8999999999987665443 37899999999999999999999999999887 6789999999999
Q ss_pred cccCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCC-CCCCChhhH
Q 024752 154 VIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPM-LRPGEPNEV 232 (263)
Q Consensus 154 ~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v 232 (263)
..+.++...|+++|++++.++++++.|++++||++++|+||+++|++....... . ...+....|. +++.+|+|+
T Consensus 161 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~dv 235 (265)
T 2o23_A 161 FEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEK--V---CNFLASQVPFPSRLGDPAEY 235 (265)
T ss_dssp HHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC---------------CHHHHTCSSSCSCBCHHHH
T ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHH--H---HHHHHHcCCCcCCCCCHHHH
Confidence 988888999999999999999999999999999999999999999987643211 1 1223345677 788999999
Q ss_pred HHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 233 SSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 233 a~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
++.+++|++ +++++|+.|.+|||+++.
T Consensus 236 a~~~~~l~~--~~~~~G~~i~vdgG~~~~ 262 (265)
T 2o23_A 236 AHLVQAIIE--NPFLNGEVIRLDGAIRMQ 262 (265)
T ss_dssp HHHHHHHHH--CTTCCSCEEEESTTCCCC
T ss_pred HHHHHHHhh--cCccCceEEEECCCEecC
Confidence 999999985 468999999999998765
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-45 Score=306.19 Aligned_cols=252 Identities=27% Similarity=0.401 Sum_probs=217.2
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
.+.+++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.. ..++.++.+|++++++++++++++.
T Consensus 9 ~~~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~ 87 (278)
T 2bgk_A 9 SSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS-PDVISFVHCDVTKDEDVRNLVDTTI 87 (278)
T ss_dssp --CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCcccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC-CCceEEEECCCCCHHHHHHHHHHHH
Confidence 455678999999999999999999999999999999999998887777666632 2368899999999999999999999
Q ss_pred hhcCCCccEEEeCCCCCCC--CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCC-CCcc
Q 024752 86 SQFDGKLNILINNAGTFIP--KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIP-MCSI 162 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-~~~~ 162 (263)
+++ +++|+||||||.... .++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.+ +...
T Consensus 88 ~~~-~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~ 166 (278)
T 2bgk_A 88 AKH-GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHV 166 (278)
T ss_dssp HHH-SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHH
T ss_pred HHc-CCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCCCCcc
Confidence 998 899999999998753 567788999999999999999999999999999988889999999999988877 7789
Q ss_pred hhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHh--cCCCCCCCChhhHHHHHHHHc
Q 024752 163 YASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVL--RTPMLRPGEPNEVSSVVAFLC 240 (263)
Q Consensus 163 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~va~~~~~l~ 240 (263)
|+++|++++.++++++.|++++||++++|+||+++|++......... +....+.. ..+.+++.+|+|+++++++|+
T Consensus 167 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~ 244 (278)
T 2bgk_A 167 YTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDS--SRVEELAHQAANLKGTLLRAEDVADAVAYLA 244 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCH--HHHHHHHHHTCSSCSCCCCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccch--hHHHHhhhcccccccccCCHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999998765432111 11112212 235678899999999999999
Q ss_pred CCCCCCccCcEEEeCCCcccc
Q 024752 241 LSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 241 s~~~~~~~G~~i~~dgG~~~~ 261 (263)
++...+++|+.+++|||+.++
T Consensus 245 ~~~~~~~~G~~~~v~gg~~~~ 265 (278)
T 2bgk_A 245 GDESKYVSGLNLVIDGGYTRT 265 (278)
T ss_dssp SGGGTTCCSCEEEESTTGGGC
T ss_pred CcccccCCCCEEEECCccccc
Confidence 988889999999999998765
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-45 Score=310.38 Aligned_cols=247 Identities=28% Similarity=0.436 Sum_probs=217.9
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
..+++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++...+.++.++.+|++++++++++++++.+
T Consensus 28 ~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 107 (279)
T 3ctm_A 28 DLFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEK 107 (279)
T ss_dssp GGGCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHH
Confidence 34678999999999999999999999999999999999998888777777766667789999999999999999999999
Q ss_pred hcCCCccEEEeCCCCCCC-CCCC-CCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc--CCCCcc
Q 024752 87 QFDGKLNILINNAGTFIP-KETT-EFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA--IPMCSI 162 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~-~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~--~~~~~~ 162 (263)
.+ +++|+||||||+... .++. +.+.++|++.+++|+.+++++++.++|.|++++.++||++||..+..+ .++...
T Consensus 108 ~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~ 186 (279)
T 3ctm_A 108 DF-GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAP 186 (279)
T ss_dssp HH-SCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHHH
T ss_pred Hh-CCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCccc
Confidence 98 899999999998766 6666 788999999999999999999999999999887899999999998887 777889
Q ss_pred hhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCC
Q 024752 163 YASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS 242 (263)
Q Consensus 163 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~ 242 (263)
|+++|++++.++++++.|++++| ++++|+||+++|++..... ... ...+....|.+++.+|+|+++++++|+++
T Consensus 187 Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~--~~~---~~~~~~~~p~~~~~~~~dvA~~~~~l~s~ 260 (279)
T 3ctm_A 187 YNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFAS--KDM---KAKWWQLTPLGREGLTQELVGGYLYLASN 260 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCC--HHH---HHHHHHHSTTCSCBCGGGTHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccC--hHH---HHHHHHhCCccCCcCHHHHHHHHHHHhCc
Confidence 99999999999999999999999 9999999999999874321 111 12334557888999999999999999999
Q ss_pred CCCCccCcEEEeCCCccc
Q 024752 243 ATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 243 ~~~~~~G~~i~~dgG~~~ 260 (263)
.+.+++|+.|++|||+.+
T Consensus 261 ~~~~~tG~~i~vdgG~~~ 278 (279)
T 3ctm_A 261 ASTFTTGSDVVIDGGYTC 278 (279)
T ss_dssp GGTTCCSCEEEESTTCCC
T ss_pred cccCccCCEEEECCCeec
Confidence 888999999999999875
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-47 Score=327.21 Aligned_cols=248 Identities=18% Similarity=0.215 Sum_probs=208.0
Q ss_pred CCCEEEEecCCC--chHHHHHHHHHHCCCeEEEeeCCch---------hHHHHHHHHHhc---CCceEEEeccCCCH--H
Q 024752 12 KGMTALVTGGTK--GIGYAVVEELAAFGAIVHTCSRNET---------ELNQRIQEWKSK---GLQVSGSVCDLKIR--A 75 (263)
Q Consensus 12 ~~k~vlVtGas~--giG~~~a~~l~~~g~~V~~~~r~~~---------~~~~~~~~~~~~---~~~~~~~~~D~~~~--~ 75 (263)
++|++||||+++ |||+++|++|+++|++|++.+|++. +++......... ...+..+.+|+++. +
T Consensus 1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~ 80 (329)
T 3lt0_A 1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN 80 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence 479999999986 9999999999999999997776652 222221111111 12367888999888 7
Q ss_pred ------------------HHHHHHHHHHhhcCCCccEEEeCCCCC--CCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhH
Q 024752 76 ------------------QREKLMETVSSQFDGKLNILINNAGTF--IPKETTEFTEEDFSTVMTTNFESAYHLSQLAHP 135 (263)
Q Consensus 76 ------------------~~~~~~~~~~~~~~~~id~li~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 135 (263)
++.++++++.+++ +++|+||||||+. ...++.+.+.++|++.|++|+.|+++++++++|
T Consensus 81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~-g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p 159 (329)
T 3lt0_A 81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKY-GKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVN 159 (329)
T ss_dssp GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHH-CCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred hhhhhhcccccccccCHHHHHHHHHHHHHhc-CCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 9999999999998 8999999999985 356788899999999999999999999999999
Q ss_pred HHhhCCCceEEEEccccccccCCCCc-chhhHHHHHHHHHHHHHHHHcc-CCcEEEEEecCcccCCccccccccc-----
Q 024752 136 LLKSAGNGNIIFISSVAGVIAIPMCS-IYASSKVAMNQLTKNLACEWAK-DKIRVNTVAPWVIRTPLLDTVEKDS----- 208 (263)
Q Consensus 136 ~~~~~~~~~iv~vsS~~~~~~~~~~~-~Y~~sK~a~~~~~~~~a~e~~~-~gi~v~~v~PG~v~t~~~~~~~~~~----- 208 (263)
.|+++ |+||++||..+..+.++.. .|++||+|+.+|+++++.|+++ +||+||+|+||+|+|++........
T Consensus 160 ~m~~~--g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~ 237 (329)
T 3lt0_A 160 IMKPQ--SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYEN 237 (329)
T ss_dssp GEEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC--------
T ss_pred HHhhC--CeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhcccccc
Confidence 99875 8999999999999999885 9999999999999999999998 8999999999999999986642110
Q ss_pred ----------------------------------hh-HHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCcEEE
Q 024752 209 ----------------------------------NF-LEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVIC 253 (263)
Q Consensus 209 ----------------------------------~~-~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~ 253 (263)
.+ .+.........|++++.+|+|+|++++||+++.+.++||+.|.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~fL~s~~a~~itG~~i~ 317 (329)
T 3lt0_A 238 NTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQTIY 317 (329)
T ss_dssp ----------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred cccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHHHHHHHHHHhCchhccccCcEEE
Confidence 00 0113445567899999999999999999999999999999999
Q ss_pred eCCCccccC
Q 024752 254 VDGGYSVTG 262 (263)
Q Consensus 254 ~dgG~~~~~ 262 (263)
+|||+++..
T Consensus 318 vdGG~~~~~ 326 (329)
T 3lt0_A 318 VDNGLNIMF 326 (329)
T ss_dssp ESTTGGGCS
T ss_pred EcCCeeEEe
Confidence 999998753
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-46 Score=310.37 Aligned_cols=235 Identities=22% Similarity=0.260 Sum_probs=191.6
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++ +.++.++.+|++++++++++++++.+++
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~- 100 (272)
T 4dyv_A 25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI---GDDALCVPTDVTDPDSVRALFTATVEKF- 100 (272)
T ss_dssp ---CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---TSCCEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHc-
Confidence 478999999999999999999999999999999999999888887776 3568899999999999999999999999
Q ss_pred CCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC--CceEEEEccccccccCCCCcchhhH
Q 024752 90 GKLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG--NGNIIFISSVAGVIAIPMCSIYASS 166 (263)
Q Consensus 90 ~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~vsS~~~~~~~~~~~~Y~~s 166 (263)
+++|+||||||+... .++.+.+.++|++.+++|+.|+++++++++|.|++++ .|+||++||..+..+.++...|++|
T Consensus 101 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~as 180 (272)
T 4dyv_A 101 GRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTAT 180 (272)
T ss_dssp SCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHHHHH
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHHHHH
Confidence 899999999999765 6788899999999999999999999999999999875 6899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
|+++++|+++++.|++++||+||+|+||+|+|++........ .......|.+++.+|+|+|++++||++.....
T Consensus 181 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~------~~~~~~~~~~~~~~pedvA~~v~fL~s~~~~~ 254 (272)
T 4dyv_A 181 KHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGV------PQADLSIKVEPVMDVAHVASAVVYMASLPLDA 254 (272)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEEEECC------------------------------CHHHHHHHHHHHHHSCTTS
T ss_pred HHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccc------hhhhhcccccCCCCHHHHHHHHHHHhCCCCcC
Confidence 999999999999999999999999999999999876543221 11222456778899999999999999966554
Q ss_pred ccCcEEEe
Q 024752 247 VTGQVICV 254 (263)
Q Consensus 247 ~~G~~i~~ 254 (263)
..++....
T Consensus 255 ~~~~i~i~ 262 (272)
T 4dyv_A 255 NVQFMTIM 262 (272)
T ss_dssp CCCEEEEE
T ss_pred ccceEEEe
Confidence 44444433
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-45 Score=307.22 Aligned_cols=249 Identities=28% Similarity=0.411 Sum_probs=217.5
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHh-cCCceEEEeccCCCHHHHHHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS-KGLQVSGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 84 (263)
.+.+++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.. .+.++.++.+|++++++++++++++
T Consensus 7 ~~~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 86 (265)
T 1h5q_A 7 GFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQI 86 (265)
T ss_dssp CEEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHH
Confidence 345779999999999999999999999999999999999987776666666543 3567899999999999999999999
Q ss_pred HhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccccccCCC----
Q 024752 85 SSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVIAIPM---- 159 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~---- 159 (263)
.+.+ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++ .++||++||..+..+.+.
T Consensus 87 ~~~~-~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~ 165 (265)
T 1h5q_A 87 DADL-GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNG 165 (265)
T ss_dssp HHHS-CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTE
T ss_pred HHhc-CCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccccc
Confidence 9998 8999999999998877778889999999999999999999999999998765 489999999888765432
Q ss_pred ---CcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHH
Q 024752 160 ---CSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVV 236 (263)
Q Consensus 160 ---~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~ 236 (263)
...|+++|++++.++++++.|++++||++++|+||+++|++..... +.. ...+....|.+++.+|+|+++++
T Consensus 166 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~---~~~~~~~~~~~~~~~~~dva~~~ 240 (265)
T 1h5q_A 166 SLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMD--KKI---RDHQASNIPLNRFAQPEEMTGQA 240 (265)
T ss_dssp ECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC--HHH---HHHHHHTCTTSSCBCGGGGHHHH
T ss_pred cccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccc--hhH---HHHHHhcCcccCCCCHHHHHHHH
Confidence 6789999999999999999999999999999999999999876532 111 13334456888899999999999
Q ss_pred HHHcCCCCCCccCcEEEeCCCccc
Q 024752 237 AFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 237 ~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
++|+++.+.+++|+.|++|||+++
T Consensus 241 ~~l~~~~~~~~~G~~~~v~gG~~~ 264 (265)
T 1h5q_A 241 ILLLSDHATYMTGGEYFIDGGQLI 264 (265)
T ss_dssp HHHHSGGGTTCCSCEEEECTTGGG
T ss_pred HhhccCchhcCcCcEEEecCCEeC
Confidence 999998888999999999999864
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-46 Score=308.57 Aligned_cols=246 Identities=30% Similarity=0.444 Sum_probs=211.3
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcC-------CceEEEeccCCCHHHHHHHHH
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG-------LQVSGSVCDLKIRAQREKLME 82 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~ 82 (263)
++++|+++||||++|||++++++|+++|++|++++|+++..++..+++...+ .++.++.+|++++++++++++
T Consensus 4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 83 (264)
T 2pd6_A 4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLE 83 (264)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHH
Confidence 5789999999999999999999999999999999999988887776665443 568899999999999999999
Q ss_pred HHHhhcCCCc-cEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccccccCCCC
Q 024752 83 TVSSQFDGKL-NILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVIAIPMC 160 (263)
Q Consensus 83 ~~~~~~~~~i-d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~ 160 (263)
.+.+.+ +++ |+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++ .++||++||..+..+.++.
T Consensus 84 ~~~~~~-g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~ 162 (264)
T 2pd6_A 84 QVQACF-SRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQ 162 (264)
T ss_dssp HHHHHH-SSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTTB
T ss_pred HHHHHh-CCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCCC
Confidence 999998 788 9999999998777777889999999999999999999999999998866 6899999999998888899
Q ss_pred cchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHc
Q 024752 161 SIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC 240 (263)
Q Consensus 161 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~ 240 (263)
..|+++|++++.++++++.|++++||++++|+||+++|++...... .. ...+....|.+++.+|+|+++++++++
T Consensus 163 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~---~~~~~~~~~~~~~~~~~dva~~~~~l~ 237 (264)
T 2pd6_A 163 TNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQ--KV---VDKITEMIPMGHLGDPEDVADVVAFLA 237 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC---------------CTGGGCTTCSCBCHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCH--HH---HHHHHHhCCCCCCCCHHHHHHHHHHHc
Confidence 9999999999999999999999999999999999999998754321 11 123334567788899999999999999
Q ss_pred CCCCCCccCcEEEeCCCcccc
Q 024752 241 LSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 241 s~~~~~~~G~~i~~dgG~~~~ 261 (263)
++...+++|+.+.+|||+.++
T Consensus 238 ~~~~~~~~G~~~~v~gg~~~~ 258 (264)
T 2pd6_A 238 SEDSGYITGTSVEVTGGLFMA 258 (264)
T ss_dssp SGGGTTCCSCEEEESTTC---
T ss_pred CCcccCCCCCEEEECCCceec
Confidence 988889999999999998753
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-45 Score=310.82 Aligned_cols=250 Identities=25% Similarity=0.388 Sum_probs=218.8
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc-CCceEEEeccCCCHHHHHHHHHHHH
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
+..++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +.++.++.+|++++++++++++++.
T Consensus 20 ~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 99 (302)
T 1w6u_A 20 PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELI 99 (302)
T ss_dssp CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999999999888888887654 6679999999999999999999999
Q ss_pred hhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHh-hCCCceEEEEccccccccCCCCcchh
Q 024752 86 SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLK-SAGNGNIIFISSVAGVIAIPMCSIYA 164 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~vsS~~~~~~~~~~~~Y~ 164 (263)
+.+ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|. +++.++||++||..+..+.++...|+
T Consensus 100 ~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~ 178 (302)
T 1w6u_A 100 KVA-GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSA 178 (302)
T ss_dssp HHT-CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHH
T ss_pred HHc-CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchhH
Confidence 998 8999999999988777777889999999999999999999999999997 44568999999999988888899999
Q ss_pred hHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCC-ccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 165 SSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTP-LLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 165 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
+||++++.++++++.|++++||++++|+||+++|+ +.......... ...+....|.+++.+|+|+++++++|+++.
T Consensus 179 ~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~---~~~~~~~~p~~~~~~~~dva~~~~~l~~~~ 255 (302)
T 1w6u_A 179 SAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTF---EKEMIGRIPCGRLGTVEELANLAAFLCSDY 255 (302)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHH---HHHHHTTCTTSSCBCHHHHHHHHHHHTSGG
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhh---HHHHHhcCCcCCCCCHHHHHHHHHHHcCCc
Confidence 99999999999999999999999999999999998 44332221111 123344578888999999999999999988
Q ss_pred CCCccCcEEEeCCCccc
Q 024752 244 TSYVTGQVICVDGGYSV 260 (263)
Q Consensus 244 ~~~~~G~~i~~dgG~~~ 260 (263)
..+++|+.+++|||..+
T Consensus 256 ~~~~~G~~~~v~gg~~~ 272 (302)
T 1w6u_A 256 ASWINGAVIKFDGGEEV 272 (302)
T ss_dssp GTTCCSCEEEESTTHHH
T ss_pred ccccCCCEEEECCCeee
Confidence 88999999999999764
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-46 Score=309.59 Aligned_cols=244 Identities=23% Similarity=0.307 Sum_probs=202.1
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh-c
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ-F 88 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~ 88 (263)
++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++...+.++.++.+|++++++++++++++.++ +
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~ 81 (260)
T 2qq5_A 2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQ 81 (260)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 478999999999999999999999999999999999999988888888776778899999999999999999999886 6
Q ss_pred CCCccEEEeCCCCC-------CCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCc
Q 024752 89 DGKLNILINNAGTF-------IPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCS 161 (263)
Q Consensus 89 ~~~id~li~~ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~ 161 (263)
+++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+. +..
T Consensus 82 -g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~~ 159 (260)
T 2qq5_A 82 -GRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM-FNV 159 (260)
T ss_dssp -TCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC-SSH
T ss_pred -CCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC-CCC
Confidence 8999999999532 2456777888999999999999999999999999988878999999999887654 457
Q ss_pred chhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhH-hcCCCCCCCChhhHHHHHHHHc
Q 024752 162 IYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMV-LRTPMLRPGEPNEVSSVVAFLC 240 (263)
Q Consensus 162 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~va~~~~~l~ 240 (263)
.|++||++++.|+++++.|++++||+||+|+||+++|++............ ..... ...|.++..+|+|+|++++||+
T Consensus 160 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~pe~va~~v~~l~ 238 (260)
T 2qq5_A 160 PYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQ-DPVLKQFKSAFSSAETTELSGKCVVALA 238 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC-----------------------CHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccc-hhHHHHHHhhhccCCCHHHHHHHHHHHh
Confidence 899999999999999999999999999999999999998754322111100 00010 1234555678999999999999
Q ss_pred CCCC-CCccCcEEEeCC
Q 024752 241 LSAT-SYVTGQVICVDG 256 (263)
Q Consensus 241 s~~~-~~~~G~~i~~dg 256 (263)
++.+ .++||+.|.+|+
T Consensus 239 s~~~~~~itG~~i~~~~ 255 (260)
T 2qq5_A 239 TDPNILSLSGKVLPSCD 255 (260)
T ss_dssp TCTTGGGGTTCEEEHHH
T ss_pred cCcccccccceeechhh
Confidence 9886 489999998874
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-45 Score=299.25 Aligned_cols=233 Identities=20% Similarity=0.241 Sum_probs=210.0
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHH-hcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWK-SKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++. ..+.++.++.+|++++++++++++++.+.+ +
T Consensus 1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g 79 (235)
T 3l77_A 1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERF-G 79 (235)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHH-S
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhc-C
Confidence 47999999999999999999999999999999999999999888886 457789999999999999999999999998 8
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHH
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAM 170 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~ 170 (263)
++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++ +.+++|+++|..+..+.++...|+++|+++
T Consensus 80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~ 158 (235)
T 3l77_A 80 DVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKR-TGGLALVTTSDVSARLIPYGGGYVSTKWAA 158 (235)
T ss_dssp SCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEECCGGGSSCCTTCHHHHHHHHHH
T ss_pred CCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCcEEEEecchhcccCCCcchHHHHHHHH
Confidence 9999999999988888899999999999999999999999999999954 468999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCc
Q 024752 171 NQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQ 250 (263)
Q Consensus 171 ~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~ 250 (263)
++|++++ ++...||+||+|+||+++|++......... ..++.+|+|+|++++||+++...+++|+
T Consensus 159 ~~~~~~l--~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~-------------~~~~~~p~dva~~v~~l~~~~~~~~~~~ 223 (235)
T 3l77_A 159 RALVRTF--QIENPDVRFFELRPGAVDTYFGGSKPGKPK-------------EKGYLKPDEIAEAVRCLLKLPKDVRVEE 223 (235)
T ss_dssp HHHHHHH--HHHCTTSEEEEEEECSBSSSTTTCCSCCCG-------------GGTCBCHHHHHHHHHHHHTSCTTCCCCE
T ss_pred HHHHHHH--hhcCCCeEEEEEeCCccccccccccCCccc-------------ccCCCCHHHHHHHHHHHHcCCCCCccce
Confidence 9999999 455779999999999999999765543221 1256789999999999999999999999
Q ss_pred EEEeCCCcccc
Q 024752 251 VICVDGGYSVT 261 (263)
Q Consensus 251 ~i~~dgG~~~~ 261 (263)
.+..|+|+...
T Consensus 224 ~~~~~~~~~~~ 234 (235)
T 3l77_A 224 LMLRSVYQRPE 234 (235)
T ss_dssp EEECCTTSCCC
T ss_pred EEEeecccCCC
Confidence 99999998754
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-46 Score=307.59 Aligned_cols=235 Identities=23% Similarity=0.299 Sum_probs=205.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
|++|||||++|||++++++|+++|++|++++|+++..++..+ +...+.++..+ |+++++++++++.+++ +++|
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~~~~~~-----d~~~v~~~~~~~~~~~-g~iD 74 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYPQLKPM-----SEQEPAELIEAVTSAY-GQVD 74 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCTTSEEC-----CCCSHHHHHHHHHHHH-SCCC
T ss_pred eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCCcEEEE-----CHHHHHHHHHHHHHHh-CCCC
Confidence 689999999999999999999999999999999988877655 65545555543 6678889999998888 8999
Q ss_pred EEEeCCCCC-CCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHHH
Q 024752 94 ILINNAGTF-IPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQ 172 (263)
Q Consensus 94 ~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~ 172 (263)
+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|++||++++.
T Consensus 75 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~ 154 (254)
T 1zmt_A 75 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACT 154 (254)
T ss_dssp EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHH
T ss_pred EEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHHHHHHH
Confidence 999999988 6677888999999999999999999999999999998878999999999999998999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEEecCcc---------cCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 173 LTKNLACEWAKDKIRVNTVAPWVI---------RTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 173 ~~~~~a~e~~~~gi~v~~v~PG~v---------~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
|+++++.|++++||+||+|+||+| +|++.... + +....+....|.+++.+|+|++++++||+++.
T Consensus 155 ~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~---~---~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~ 228 (254)
T 1zmt_A 155 LANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTN---P---EHVAHVKKVTALQRLGTQKELGELVAFLASGS 228 (254)
T ss_dssp HHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTC---H---HHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccC---h---HHHHHHhccCCCCCCcCHHHHHHHHHHHhCcc
Confidence 999999999999999999999999 66554321 1 11233344578889999999999999999999
Q ss_pred CCCccCcEEEeCCCcccc
Q 024752 244 TSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 244 ~~~~~G~~i~~dgG~~~~ 261 (263)
+.++||+.|.+|||+...
T Consensus 229 ~~~~tG~~~~vdgG~~~~ 246 (254)
T 1zmt_A 229 CDYLTGQVFWLAGGFPMI 246 (254)
T ss_dssp CGGGTTCEEEESTTCCCC
T ss_pred cCCccCCEEEECCCchhh
Confidence 999999999999998753
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-45 Score=309.01 Aligned_cols=250 Identities=31% Similarity=0.439 Sum_probs=217.3
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHh-----cCCceEEEeccCCCHHHHHHHHHH
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS-----KGLQVSGSVCDLKIRAQREKLMET 83 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~ 83 (263)
.++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.. .+.++.++.+|+++++++++++++
T Consensus 14 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 93 (303)
T 1yxm_A 14 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS 93 (303)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHH
Confidence 358899999999999999999999999999999999999998888888875 356799999999999999999999
Q ss_pred HHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcch
Q 024752 84 VSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIY 163 (263)
Q Consensus 84 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y 163 (263)
+.+.+ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.+.+++.++||++||.. ..+.+....|
T Consensus 94 ~~~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~~~~Y 171 (303)
T 1yxm_A 94 TLDTF-GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPLAVHS 171 (303)
T ss_dssp HHHHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTTCHHH
T ss_pred HHHHc-CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCCcchhh
Confidence 99998 799999999998777777788999999999999999999999999966555579999999988 7778888999
Q ss_pred hhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 164 ASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 164 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
+++|++++.++++++.|+.++||++++|+||+++|++....... ...+.........|.+++.+|+|+|+++++|+++.
T Consensus 172 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~~~~ 250 (303)
T 1yxm_A 172 GAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGS-WGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPA 250 (303)
T ss_dssp HHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGG-GGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccc-cchHHHHHHHhcCcccCCCCHHHHHHHHHHHhCcc
Confidence 99999999999999999999999999999999999953211110 00011123344568888999999999999999988
Q ss_pred CCCccCcEEEeCCCcccc
Q 024752 244 TSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 244 ~~~~~G~~i~~dgG~~~~ 261 (263)
..+++|+.|++|||..+.
T Consensus 251 ~~~~~G~~~~v~gG~~~~ 268 (303)
T 1yxm_A 251 ASFITGQSVDVDGGRSLY 268 (303)
T ss_dssp GTTCCSCEEEESTTGGGC
T ss_pred cccCCCcEEEECCCeecc
Confidence 889999999999998764
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-45 Score=301.07 Aligned_cols=241 Identities=31% Similarity=0.415 Sum_probs=210.1
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
|++++|+++||||++|||++++++|+++|++|++++|++++++++.+++. ...++.+|++++++++++++ .+
T Consensus 3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~----~~ 74 (244)
T 3d3w_A 3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----GIEPVCVDLGDWEATERALG----SV 74 (244)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHT----TC
T ss_pred cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC----CCCEEEEeCCCHHHHHHHHH----Hc
Confidence 57899999999999999999999999999999999999887776655432 34567999999999988876 44
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccccccCCCCcchhhHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++ .++||++||..+..+.++...|++||
T Consensus 75 -~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK 153 (244)
T 3d3w_A 75 -GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTK 153 (244)
T ss_dssp -CCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred -CCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHHHH
Confidence 7899999999988777777889999999999999999999999999998876 79999999999998888899999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
++++.++++++.|++++||++++|+||+++|++.......+... ..+....|.+++.+|+|+++++++++++.+.++
T Consensus 154 ~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~ 230 (244)
T 3d3w_A 154 GALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKA---KTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMT 230 (244)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHH---HHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHH---HHHHhhCCCCCCcCHHHHHHHHHHHcCccccCC
Confidence 99999999999999999999999999999999876432222221 233445688899999999999999999888899
Q ss_pred cCcEEEeCCCcccc
Q 024752 248 TGQVICVDGGYSVT 261 (263)
Q Consensus 248 ~G~~i~~dgG~~~~ 261 (263)
+|+.+++|||+..+
T Consensus 231 ~G~~~~v~gG~~~~ 244 (244)
T 3d3w_A 231 TGSTLPVEGGFWAC 244 (244)
T ss_dssp CSCEEEESTTGGGC
T ss_pred CCCEEEECCCccCC
Confidence 99999999998753
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-45 Score=302.11 Aligned_cols=226 Identities=22% Similarity=0.212 Sum_probs=193.0
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
|.+|++|||||++|||++++++|+++|++|++++|+.+.+++..+++. .++.++.+|++++++++++++++.+++ +
T Consensus 1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~-g 76 (235)
T 3l6e_A 1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG---NAVIGIVADLAHHEDVDVAFAAAVEWG-G 76 (235)
T ss_dssp --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG---GGEEEEECCTTSHHHHHHHHHHHHHHH-C
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc---CCceEEECCCCCHHHHHHHHHHHHHhc-C
Confidence 357999999999999999999999999999999999999888887773 258899999999999999999999998 8
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHH
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAM 170 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~ 170 (263)
++|+||||||+....++.+.+.++|++.+++|+.|+++++++++|.|++++ ++||++||..+..+.++...|++||+++
T Consensus 77 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa~ 155 (235)
T 3l6e_A 77 LPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGKANESLYCASKWGM 155 (235)
T ss_dssp SCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSCSSHHHHHHHHHHH
T ss_pred CCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCCCCCcHHHHHHHHH
Confidence 999999999998888888999999999999999999999999999998765 5999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcC-CCCCCccC
Q 024752 171 NQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCL-SATSYVTG 249 (263)
Q Consensus 171 ~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s-~~~~~~~G 249 (263)
++|+++++.|++++||+||+|+||+|+|++...... .+..++.+|+|+|+.++|+++ +...+++|
T Consensus 156 ~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~--------------~~~~~~~~pedvA~~v~~l~~~~~~~~i~~ 221 (235)
T 3l6e_A 156 RGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH--------------VDPSGFMTPEDAAAYMLDALEARSSCHVTD 221 (235)
T ss_dssp HHHHHHHHHHTTTSSEEEEEEEEEEECCCC-------------------------CBCHHHHHHHHHHHTCCCSSEEEEE
T ss_pred HHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCC--------------CCCcCCCCHHHHHHHHHHHHhCCCCcceee
Confidence 999999999999999999999999999998654321 133467899999999999998 56677888
Q ss_pred cEEEeC
Q 024752 250 QVICVD 255 (263)
Q Consensus 250 ~~i~~d 255 (263)
-.+.-.
T Consensus 222 i~~~~~ 227 (235)
T 3l6e_A 222 LFIGRN 227 (235)
T ss_dssp EEEEEC
T ss_pred EEEecC
Confidence 666543
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-45 Score=299.14 Aligned_cols=221 Identities=27% Similarity=0.340 Sum_probs=195.6
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
|++++|++|||||++|||++++++|+++|++|++++|+.+ +|++++++++++++++
T Consensus 2 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------------~D~~~~~~v~~~~~~~---- 57 (223)
T 3uce_A 2 MGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------------LDISDEKSVYHYFETI---- 57 (223)
T ss_dssp ---CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------------CCTTCHHHHHHHHHHH----
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------------cCCCCHHHHHHHHHHh----
Confidence 4678999999999999999999999999999999999865 8999999999998764
Q ss_pred CCCccEEEeCCCCC-CCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 89 DGKLNILINNAGTF-IPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 89 ~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+++|++|||||+. ...++.+.+.++|++.+++|+.++++++++++|.|++ +|+||++||..+..+.++...|+++|
T Consensus 58 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~Y~asK 134 (223)
T 3uce_A 58 -GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ--GGSITLTSGMLSRKVVANTYVKAAIN 134 (223)
T ss_dssp -CSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE--EEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred -CCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC--CeEEEEecchhhccCCCCchHHHHHH
Confidence 7899999999988 5577888999999999999999999999999999976 58999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
++++.|+++++.|+++ |+||+|+||+++|++........ ............|.+++.+|+|+|++++||++ ++++
T Consensus 135 ~a~~~~~~~la~e~~~--i~vn~v~PG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~--~~~~ 209 (223)
T 3uce_A 135 AAIEATTKVLAKELAP--IRVNAISPGLTKTEAYKGMNADD-RDAMYQRTQSHLPVGKVGEASDIAMAYLFAIQ--NSYM 209 (223)
T ss_dssp HHHHHHHHHHHHHHTT--SEEEEEEECSBCSGGGTTSCHHH-HHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHH--CTTC
T ss_pred HHHHHHHHHHHHhhcC--cEEEEEEeCCCcchhhhhcchhh-HHHHHHHHhhcCCCCCccCHHHHHHHHHHHcc--CCCC
Confidence 9999999999999987 99999999999999876543321 12223445667899999999999999999997 4789
Q ss_pred cCcEEEeCCCcccc
Q 024752 248 TGQVICVDGGYSVT 261 (263)
Q Consensus 248 ~G~~i~~dgG~~~~ 261 (263)
||+.|++|||+.++
T Consensus 210 tG~~i~vdgG~~~s 223 (223)
T 3uce_A 210 TGTVIDVDGGALLG 223 (223)
T ss_dssp CSCEEEESTTGGGC
T ss_pred CCcEEEecCCeecC
Confidence 99999999999864
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-45 Score=303.59 Aligned_cols=245 Identities=28% Similarity=0.430 Sum_probs=217.5
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCC-chhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN-ETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
++++|+++||||++|||++++++|+++|++|++++|+ ++.+++..+++...+.++.++.+|++++++++++++++.+++
T Consensus 4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (258)
T 3afn_B 4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKF 83 (258)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4789999999999999999999999999999999999 888888888887767789999999999999999999999998
Q ss_pred CCCccEEEeCCCC-CCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC--C---ceEEEEccccccc-cCCCCc
Q 024752 89 DGKLNILINNAGT-FIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG--N---GNIIFISSVAGVI-AIPMCS 161 (263)
Q Consensus 89 ~~~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~---~~iv~vsS~~~~~-~~~~~~ 161 (263)
+++|+||||||. ....++.+.+.++|++.+++|+.++++++++++|.|.+++ . ++||++||..+.. +.++..
T Consensus 84 -g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~ 162 (258)
T 3afn_B 84 -GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAG 162 (258)
T ss_dssp -SSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTTCH
T ss_pred -CCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCCch
Confidence 899999999998 5566777889999999999999999999999999997654 3 8999999998887 778889
Q ss_pred chhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcC
Q 024752 162 IYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCL 241 (263)
Q Consensus 162 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s 241 (263)
.|+++|++++.++++++.|++++||++++|+||+++|++..... +.. ........|.+++.+|+|++++++++++
T Consensus 163 ~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~---~~~~~~~~~~~~~~~~~dva~~~~~l~~ 237 (258)
T 3afn_B 163 LYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKT--QDV---RDRISNGIPMGRFGTAEEMAPAFLFFAS 237 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCC--HHH---HHHHHTTCTTCSCBCGGGTHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccC--HHH---HHHHhccCCCCcCCCHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999875431 111 2334445688889999999999999998
Q ss_pred CCCC-CccCcEEEeCCCccc
Q 024752 242 SATS-YVTGQVICVDGGYSV 260 (263)
Q Consensus 242 ~~~~-~~~G~~i~~dgG~~~ 260 (263)
+... +++|+.+++|||+..
T Consensus 238 ~~~~~~~~G~~~~v~gg~~~ 257 (258)
T 3afn_B 238 HLASGYITGQVLDINGGQYK 257 (258)
T ss_dssp HHHHTTCCSEEEEESTTSSC
T ss_pred cchhccccCCEEeECCCccC
Confidence 7666 899999999999854
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-45 Score=306.30 Aligned_cols=242 Identities=22% Similarity=0.298 Sum_probs=201.6
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
.+++ |++|||||++|||++++++|+++|++|++++|+++.++++.+++... .++.++.+|++++++++++++++.+.+
T Consensus 18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 95 (272)
T 2nwq_A 18 SHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK-TRVLPLTLDVRDRAAMSAAVDNLPEEF 95 (272)
T ss_dssp ---C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHTCCGGG
T ss_pred CCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 4566 99999999999999999999999999999999999888888777543 568899999999999999999999888
Q ss_pred CCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCc-eEEEEccccccccCCCCcchhhH
Q 024752 89 DGKLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNG-NIIFISSVAGVIAIPMCSIYASS 166 (263)
Q Consensus 89 ~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-~iv~vsS~~~~~~~~~~~~Y~~s 166 (263)
+++|+||||||+... .++.+.+.++|++.+++|+.++++++++++|.|++++.| +||++||..+..+.++...|+++
T Consensus 96 -g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y~as 174 (272)
T 2nwq_A 96 -ATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGT 174 (272)
T ss_dssp -SSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred -CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchHHHH
Confidence 899999999998764 677889999999999999999999999999999987778 99999999999998899999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
|++++.|+++++.|++++||+||+|+||+++|++......... .......+...+.+|+|+|++++||+++ ..+
T Consensus 175 Kaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~-----~~~~~~~~~~~~~~pedvA~~v~~l~s~-~~~ 248 (272)
T 2nwq_A 175 KAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQ-----ARYDKTYAGAHPIQPEDIAETIFWIMNQ-PAH 248 (272)
T ss_dssp HHHHHHHHHHHHTTCTTSCCEEEEEEECSBC-------------------------CCCCBCHHHHHHHHHHHHTS-CTT
T ss_pred HHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccch-----HHHHHhhccCCCCCHHHHHHHHHHHhCC-Ccc
Confidence 9999999999999999999999999999999998643211110 0000111122357899999999999996 568
Q ss_pred ccCcEEEeCCCcc
Q 024752 247 VTGQVICVDGGYS 259 (263)
Q Consensus 247 ~~G~~i~~dgG~~ 259 (263)
++|+.|.+++|..
T Consensus 249 ~~g~~i~v~~~~~ 261 (272)
T 2nwq_A 249 LNINSLEIMPVSQ 261 (272)
T ss_dssp EEEEEEEEEETTE
T ss_pred CccceEEEeeccC
Confidence 9999999999853
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-44 Score=297.58 Aligned_cols=242 Identities=29% Similarity=0.451 Sum_probs=216.3
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEe-eCCchhHHHHHHHHHhcCCceEE-EeccCCCHHHHHHHHHHHHhhcCC
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTC-SRNETELNQRIQEWKSKGLQVSG-SVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~-~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
+|+++||||++|||++++++|+++|++|+++ +|+++..++..+++...+.++.. +.+|++++++++++++++.+.+ +
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~ 79 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVL-G 79 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHH-T
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhc-C
Confidence 5899999999999999999999999999998 89998888888888776666777 8999999999999999999998 8
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHH
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAM 170 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~ 170 (263)
++|++|||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.++...|+++|+++
T Consensus 80 ~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~ 159 (245)
T 2ph3_A 80 GLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGL 159 (245)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcchHHHHHHH
Confidence 99999999999877777788999999999999999999999999999987789999999999888888899999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCc
Q 024752 171 NQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQ 250 (263)
Q Consensus 171 ~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~ 250 (263)
+.++++++.|+.++||+++.|+||+++|++..... ... ...+....|.+++.+|+|+++++++++++...+++|+
T Consensus 160 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~---~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~ 234 (245)
T 2ph3_A 160 IGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLP--QEV---KEAYLKQIPAGRFGRPEEVAEAVAFLVSEKAGYITGQ 234 (245)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC--HHH---HHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSC
T ss_pred HHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcC--HHH---HHHHHhcCCCCCCcCHHHHHHHHHHHhCcccccccCC
Confidence 99999999999999999999999999999875432 111 1233345677888999999999999999877889999
Q ss_pred EEEeCCCccc
Q 024752 251 VICVDGGYSV 260 (263)
Q Consensus 251 ~i~~dgG~~~ 260 (263)
.+++|||+..
T Consensus 235 ~~~v~gg~~~ 244 (245)
T 2ph3_A 235 TLCVDGGLTP 244 (245)
T ss_dssp EEEESTTCSC
T ss_pred EEEECCCCCC
Confidence 9999999764
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-45 Score=323.91 Aligned_cols=244 Identities=25% Similarity=0.322 Sum_probs=207.8
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
..+++|++|||||++|||++++++|+++|++|++++|+... ++..+...+. .+.++.+|++++++++++++++.+++
T Consensus 209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l~~~~~~~--~~~~~~~Dvtd~~~v~~~~~~~~~~~ 285 (454)
T 3u0b_A 209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADKV--GGTALTLDVTADDAVDKITAHVTEHH 285 (454)
T ss_dssp STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHHHHHH--TCEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHHc--CCeEEEEecCCHHHHHHHHHHHHHHc
Confidence 34689999999999999999999999999999999997532 2222222222 24678999999999999999999998
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
++++|+||||||+....++.+.+.++|++.|++|+.|++++.++++|.|.+++.++||++||..+..+.++...|+++|+
T Consensus 286 g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~YaasKa 365 (454)
T 3u0b_A 286 GGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKA 365 (454)
T ss_dssp TTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred CCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHHHHHHHH
Confidence 44599999999999888888999999999999999999999999999998888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCcc
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~ 248 (263)
++++|+++++.|++++||+||+|+||+++|++......... .......++++.++|+|+++++.||+++.++++|
T Consensus 366 al~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~-----~~~~~~~~l~r~g~pedvA~~v~fL~s~~a~~it 440 (454)
T 3u0b_A 366 GMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATR-----EVGRRLNSLFQGGQPVDVAELIAYFASPASNAVT 440 (454)
T ss_dssp HHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------C-----HHHHHSBTTSSCBCHHHHHHHHHHHHCGGGTTCC
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhH-----HHHHhhccccCCCCHHHHHHHHHHHhCCccCCCC
Confidence 99999999999999999999999999999999765432211 2223345788889999999999999999999999
Q ss_pred CcEEEeCCCccc
Q 024752 249 GQVICVDGGYSV 260 (263)
Q Consensus 249 G~~i~~dgG~~~ 260 (263)
||+|++|||..+
T Consensus 441 G~~i~vdGG~~l 452 (454)
T 3u0b_A 441 GNTIRVCGQAML 452 (454)
T ss_dssp SCEEEESSSBSC
T ss_pred CcEEEECCcccc
Confidence 999999999864
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-44 Score=300.82 Aligned_cols=250 Identities=27% Similarity=0.396 Sum_probs=218.7
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeC-CchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-NETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 84 (263)
...+++++|+++||||++|||++++++|+++|++|++++| +++..++..+++...+.++.++.+|++++++++++++++
T Consensus 14 ~~~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~ 93 (274)
T 1ja9_A 14 DASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKA 93 (274)
T ss_dssp --CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence 4557899999999999999999999999999999999999 778888888888777778899999999999999999999
Q ss_pred HhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccc-ccCCCCcch
Q 024752 85 SSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGV-IAIPMCSIY 163 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~-~~~~~~~~Y 163 (263)
.+++ +++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|++ +++||++||..+. .+.++...|
T Consensus 94 ~~~~-~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~~Y 170 (274)
T 1ja9_A 94 VSHF-GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR--GGRIILTSSIAAVMTGIPNHALY 170 (274)
T ss_dssp HHHH-SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE--EEEEEEECCGGGTCCSCCSCHHH
T ss_pred HHHc-CCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCEEEEEcChHhccCCCCCCchH
Confidence 9998 79999999999987777778899999999999999999999999999973 3899999999988 777888999
Q ss_pred hhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccccc-------chh-HHHHHHhHhcCCCCCCCChhhHHHH
Q 024752 164 ASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKD-------SNF-LEHANRMVLRTPMLRPGEPNEVSSV 235 (263)
Q Consensus 164 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-------~~~-~~~~~~~~~~~~~~~~~~~~~va~~ 235 (263)
+++|++++.++++++.|++++||+++.++||+++|++....... ... .+....+....|.+++.+|+|++++
T Consensus 171 ~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 250 (274)
T 1ja9_A 171 AGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRA 250 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCCCccCHHHHHHH
Confidence 99999999999999999999999999999999999987531110 000 1122334456788889999999999
Q ss_pred HHHHcCCCCCCccCcEEEeCCCc
Q 024752 236 VAFLCLSATSYVTGQVICVDGGY 258 (263)
Q Consensus 236 ~~~l~s~~~~~~~G~~i~~dgG~ 258 (263)
+++|+++...+++|+.+++|||+
T Consensus 251 i~~l~~~~~~~~~G~~~~v~gG~ 273 (274)
T 1ja9_A 251 VSALCQEESEWINGQVIKLTGGG 273 (274)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHHhCcccccccCcEEEecCCc
Confidence 99999988888999999999996
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-44 Score=298.17 Aligned_cols=236 Identities=22% Similarity=0.308 Sum_probs=197.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
|+++||||++|||++++++|+++|++|++++|+++.++++.+++ +.++.++.+|++++++++++++++.+++ +++|
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD 76 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEW-CNID 76 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHTSCTTT-CCCC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHhC-CCCC
Confidence 68999999999999999999999999999999998888777665 2468899999999999999999998888 8999
Q ss_pred EEEeCCCCCC-CCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHHH
Q 024752 94 ILINNAGTFI-PKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQ 172 (263)
Q Consensus 94 ~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~ 172 (263)
+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+..+.++...|++||++++.
T Consensus 77 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~ 156 (248)
T 3asu_A 77 ILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQ 156 (248)
T ss_dssp EEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred EEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHHHHHHH
Confidence 9999999874 466778899999999999999999999999999988778999999999999998999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEEecCccc-CCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCcE
Q 024752 173 LTKNLACEWAKDKIRVNTVAPWVIR-TPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQV 251 (263)
Q Consensus 173 ~~~~~a~e~~~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~ 251 (263)
|+++++.|++++||+||+|+||+|+ |++......... ...... .....+.+|+|++++++||+++ ..+++|+.
T Consensus 157 ~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~--~~~~~~---~~~~~~~~p~dvA~~v~~l~s~-~~~~~g~~ 230 (248)
T 3asu_A 157 FSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDD--GKAEKT---YQNTVALTPEDVSEAVWWVSTL-PAHVNINT 230 (248)
T ss_dssp HHHHHHHHTTTSCCEEEEEEECSBCC---------------------------CCBCHHHHHHHHHHHHHS-CTTCCCCE
T ss_pred HHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCch--HHHHHH---HhccCCCCHHHHHHHHHHHhcC-CccceeeE
Confidence 9999999999999999999999999 998643211000 000110 1122346899999999999996 46899999
Q ss_pred EEeCCCcc
Q 024752 252 ICVDGGYS 259 (263)
Q Consensus 252 i~~dgG~~ 259 (263)
+.++++..
T Consensus 231 i~v~~~~~ 238 (248)
T 3asu_A 231 LEMMPVTQ 238 (248)
T ss_dssp EEECCTTC
T ss_pred EEEccccc
Confidence 99998743
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-44 Score=295.51 Aligned_cols=241 Identities=32% Similarity=0.460 Sum_probs=209.8
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
+++++|+++||||++|||++++++|+++|++|++++|+++..++..+++ ..+.++.+|++++++++++++ .+
T Consensus 3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~----~~ 74 (244)
T 1cyd_A 3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----PGIEPVCVDLGDWDATEKALG----GI 74 (244)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHT----TC
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----cCCCcEEecCCCHHHHHHHHH----Hc
Confidence 5688999999999999999999999999999999999988776665542 235667999999999988876 34
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccccccCCCCcchhhHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++ .++||++||..+..+.++...|+++|
T Consensus 75 -~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK 153 (244)
T 1cyd_A 75 -GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTK 153 (244)
T ss_dssp -CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred -CCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHHHH
Confidence 7899999999988777777889999999999999999999999999998876 78999999999998888889999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
++++.++++++.|++++||++++|+||+++|++.......... ...+....|.+++.+++|+++++++++++.+.++
T Consensus 154 ~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~ 230 (244)
T 1cyd_A 154 GAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEF---ARKLKERHPLRKFAEVEDVVNSILFLLSDRSAST 230 (244)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHH---HHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHH---HHHHHhcCCccCCCCHHHHHHHHHHHhCchhhcc
Confidence 9999999999999999999999999999999986543222222 1334445688889999999999999999888899
Q ss_pred cCcEEEeCCCcccc
Q 024752 248 TGQVICVDGGYSVT 261 (263)
Q Consensus 248 ~G~~i~~dgG~~~~ 261 (263)
+|+.+.+|||+.++
T Consensus 231 ~G~~~~v~gG~~~~ 244 (244)
T 1cyd_A 231 SGGGILVDAGYLAS 244 (244)
T ss_dssp CSSEEEESTTGGGC
T ss_pred cCCEEEECCCccCC
Confidence 99999999998754
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-44 Score=298.71 Aligned_cols=235 Identities=34% Similarity=0.448 Sum_probs=200.9
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
.+..++++|+++||||++|||++++++|+++|++|++++|+++..+ ++ + .+.++ +|+ +++++++++++
T Consensus 12 ~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~~---~-~~~~~-~D~--~~~~~~~~~~~- 79 (249)
T 1o5i_A 12 HMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----RS---G-HRYVV-CDL--RKDLDLLFEKV- 79 (249)
T ss_dssp ----CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HT---C-SEEEE-CCT--TTCHHHHHHHS-
T ss_pred hHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH----hh---C-CeEEE-eeH--HHHHHHHHHHh-
Confidence 4566799999999999999999999999999999999999974322 22 2 56677 999 45666666654
Q ss_pred hhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhh
Q 024752 86 SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYAS 165 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~ 165 (263)
.++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.++...|++
T Consensus 80 ----~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~ 155 (249)
T 1o5i_A 80 ----KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNS 155 (249)
T ss_dssp ----CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred ----cCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCchHHH
Confidence 4799999999988777788889999999999999999999999999999887899999999999999889999999
Q ss_pred HHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHH-HhHhcCCCCCCCChhhHHHHHHHHcCCCC
Q 024752 166 SKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHAN-RMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244 (263)
Q Consensus 166 sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~va~~~~~l~s~~~ 244 (263)
+|++++.++++++.|++++||+||+|+||+++|++...... ... . .+....|.+++.+|+|+|++++||+++.+
T Consensus 156 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~---~~~~~~~~p~~~~~~~~dvA~~i~~l~s~~~ 230 (249)
T 1o5i_A 156 ARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLS--EEK---KKQVESQIPMRRMAKPEEIASVVAFLCSEKA 230 (249)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSC--HHH---HHHHHTTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccch--hhH---HHHHHhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence 99999999999999999999999999999999998754321 111 2 34446788899999999999999999988
Q ss_pred CCccCcEEEeCCCcccc
Q 024752 245 SYVTGQVICVDGGYSVT 261 (263)
Q Consensus 245 ~~~~G~~i~~dgG~~~~ 261 (263)
.+++|+.+.+|||+...
T Consensus 231 ~~~tG~~~~vdgG~~~~ 247 (249)
T 1o5i_A 231 SYLTGQTIVVDGGLSKF 247 (249)
T ss_dssp TTCCSCEEEESTTCCCC
T ss_pred cCCCCCEEEECCCcccC
Confidence 99999999999998753
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=309.95 Aligned_cols=252 Identities=23% Similarity=0.287 Sum_probs=202.3
Q ss_pred cCCCCCCEEEEecC--CCchHHHHHHHHHHCCCeEEEeeCCchh------HH-HHHHHHHhc--CCc---eEEEec----
Q 024752 8 RWSLKGMTALVTGG--TKGIGYAVVEELAAFGAIVHTCSRNETE------LN-QRIQEWKSK--GLQ---VSGSVC---- 69 (263)
Q Consensus 8 ~~~~~~k~vlVtGa--s~giG~~~a~~l~~~g~~V~~~~r~~~~------~~-~~~~~~~~~--~~~---~~~~~~---- 69 (263)
.|++++|++||||| ++|||++++++|+++|++|++++|++.. .+ +..+++.+. +.. +..+.+
T Consensus 4 ~~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 83 (315)
T 2o2s_A 4 PIDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAF 83 (315)
T ss_dssp CCCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTC
T ss_pred cccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccc
Confidence 46789999999999 8999999999999999999999986421 10 011112111 110 233333
Q ss_pred --------cCCC--------HHHHHHHHHHHHhhcCCCccEEEeCCCCCC--CCCCCCCCHHHHHHHHHhhhHhHHHHHH
Q 024752 70 --------DLKI--------RAQREKLMETVSSQFDGKLNILINNAGTFI--PKETTEFTEEDFSTVMTTNFESAYHLSQ 131 (263)
Q Consensus 70 --------D~~~--------~~~~~~~~~~~~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 131 (263)
|+++ +++++++++++.+++ +++|+||||||+.. ..++.+.+.++|++.+++|+.+++++++
T Consensus 84 ~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~ 162 (315)
T 2o2s_A 84 DKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDL-GNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQ 162 (315)
T ss_dssp SSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHH-CSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred cccchhhhhhhcccccccCCHHHHHHHHHHHHHhc-CCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHH
Confidence 3333 568999999999998 89999999999764 4667788999999999999999999999
Q ss_pred HHhHHHhhCCCceEEEEccccccccCCCC-cchhhHHHHHHHHHHHHHHHHcc-CCcEEEEEecCcccCCcccccccc--
Q 024752 132 LAHPLLKSAGNGNIIFISSVAGVIAIPMC-SIYASSKVAMNQLTKNLACEWAK-DKIRVNTVAPWVIRTPLLDTVEKD-- 207 (263)
Q Consensus 132 ~~~~~~~~~~~~~iv~vsS~~~~~~~~~~-~~Y~~sK~a~~~~~~~~a~e~~~-~gi~v~~v~PG~v~t~~~~~~~~~-- 207 (263)
+++|.|++ +|+||++||..+..+.++. ..|++||+++++|+++++.|+++ +||+||+|+||+|+|++.......
T Consensus 163 ~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~ 240 (315)
T 2o2s_A 163 HFGPIMNE--GGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGE 240 (315)
T ss_dssp HHSTTEEE--EEEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSSS
T ss_pred HHHHHHhc--CCEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhcccccc
Confidence 99999976 4899999999999888887 58999999999999999999985 899999999999999986543211
Q ss_pred chh-HHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCccccC
Q 024752 208 SNF-LEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVTG 262 (263)
Q Consensus 208 ~~~-~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 262 (263)
..+ ......+....|++++.+|+|++++++||+++.+.++||+.|.+|||+.+.+
T Consensus 241 ~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~~ 296 (315)
T 2o2s_A 241 KSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLHAMG 296 (315)
T ss_dssp SCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGCS
T ss_pred chhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCeeeec
Confidence 111 1111223345789999999999999999999999999999999999987654
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-45 Score=314.07 Aligned_cols=252 Identities=23% Similarity=0.294 Sum_probs=170.0
Q ss_pred cCCCCCCEEEEecC--CCchHHHHHHHHHHCCCeEEEeeCCc-----------hhHH-----------HHHHHHHhcCCc
Q 024752 8 RWSLKGMTALVTGG--TKGIGYAVVEELAAFGAIVHTCSRNE-----------TELN-----------QRIQEWKSKGLQ 63 (263)
Q Consensus 8 ~~~~~~k~vlVtGa--s~giG~~~a~~l~~~g~~V~~~~r~~-----------~~~~-----------~~~~~~~~~~~~ 63 (263)
.|++++|++||||| ++|||+++|++|+++|++|++++|++ +.++ ++.+++.+.+..
T Consensus 4 ~~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (319)
T 2ptg_A 4 PVDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVD 83 (319)
T ss_dssp CCCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC-------------------------------
T ss_pred ccccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccc
Confidence 36789999999999 89999999999999999999998753 1111 222333322210
Q ss_pred ---eEEEecc------------CCC--------HHHHHHHHHHHHhhcCCCccEEEeCCCCCC--CCCCCCCCHHHHHHH
Q 024752 64 ---VSGSVCD------------LKI--------RAQREKLMETVSSQFDGKLNILINNAGTFI--PKETTEFTEEDFSTV 118 (263)
Q Consensus 64 ---~~~~~~D------------~~~--------~~~~~~~~~~~~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~ 118 (263)
...+.+| +++ +++++++++++.+++ +++|+||||||+.. ..++.+.+.++|++.
T Consensus 84 ~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~ 162 (319)
T 2ptg_A 84 LVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADV-GQIDILVHSLANGPEVTKPLLQTSRKGYLAA 162 (319)
T ss_dssp -CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHH-SCEEEEEEEEECCSSSSSCGGGCCHHHHHHH
T ss_pred ccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHc-CCCCEEEECCccCCCCCCccccCCHHHHHHH
Confidence 2333333 333 458899999999998 89999999999763 466778899999999
Q ss_pred HHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCC-cchhhHHHHHHHHHHHHHHHHcc-CCcEEEEEecCcc
Q 024752 119 MTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMC-SIYASSKVAMNQLTKNLACEWAK-DKIRVNTVAPWVI 196 (263)
Q Consensus 119 ~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~-~~Y~~sK~a~~~~~~~~a~e~~~-~gi~v~~v~PG~v 196 (263)
|++|+.++++++++++|+|++ +|+||++||..+..+.++. ..|++||+|+++|+++++.|+++ +||+||+|+||+|
T Consensus 163 ~~vN~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v 240 (319)
T 2ptg_A 163 VSSSSYSFVSLLQHFLPLMKE--GGSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPL 240 (319)
T ss_dssp HHHHTHHHHHHHHHHGGGEEE--EEEEEEEEECC------------------THHHHHHHHHHHHHHHCCEEEEEEECCC
T ss_pred HhHhhHHHHHHHHHHHHHHhc--CceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCc
Confidence 999999999999999999976 4899999999999888887 68999999999999999999985 8999999999999
Q ss_pred cCCcccccccc--chhH-HHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCccccC
Q 024752 197 RTPLLDTVEKD--SNFL-EHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVTG 262 (263)
Q Consensus 197 ~t~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 262 (263)
+|++....... ..+. .....+....|++++.+|+|++++++||+++.+.++||+.|.+|||+++.+
T Consensus 241 ~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~~~ 309 (319)
T 2ptg_A 241 KSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGLHAMG 309 (319)
T ss_dssp C-------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCTTC-
T ss_pred cChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCceeec
Confidence 99987543211 1110 001122334688899999999999999999999999999999999998654
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-44 Score=331.95 Aligned_cols=232 Identities=27% Similarity=0.386 Sum_probs=203.5
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc---------hhHHHHHHHHHhcCCceEEEeccCCCHHHHH
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE---------TELNQRIQEWKSKGLQVSGSVCDLKIRAQRE 78 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 78 (263)
++++++|+++||||++|||+++|++|+++|++|++.+|+. +.++++.+++...+.++. +|+++.++++
T Consensus 3 ~~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~---~d~~d~~~~~ 79 (604)
T 2et6_A 3 PVDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAV---ADYNNVLDGD 79 (604)
T ss_dssp CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEE---EECCCTTCHH
T ss_pred CCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEE---EEcCCHHHHH
Confidence 3568999999999999999999999999999999998765 667778888876665443 5888888889
Q ss_pred HHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCC
Q 024752 79 KLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIP 158 (263)
Q Consensus 79 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~ 158 (263)
++++++.++| |++|+||||||+....++.+.+.++|++.|++|+.|+++++++++|+|++++.|+||++||.++..+.+
T Consensus 80 ~~v~~~~~~~-G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~ 158 (604)
T 2et6_A 80 KIVETAVKNF-GTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNF 158 (604)
T ss_dssp HHHHHHHHHH-SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT
T ss_pred HHHHHHHHHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCC
Confidence 9999999998 899999999999877888899999999999999999999999999999988889999999999999999
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHH
Q 024752 159 MCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAF 238 (263)
Q Consensus 159 ~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ 238 (263)
+...|++||+|+.+|+++++.|++++||+||+|+|| +.|+|...... +. . ....+|+|+++.++|
T Consensus 159 ~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~~~-~~-------~------~~~~~pe~vA~~v~~ 223 (604)
T 2et6_A 159 GQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESIMP-PP-------M------LEKLGPEKVAPLVLY 223 (604)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTTSC-HH-------H------HTTCSHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccccCC-hh-------h------hccCCHHHHHHHHHH
Confidence 999999999999999999999999999999999998 68887543211 00 0 012579999999999
Q ss_pred HcCCCCCCccCcEEEeCCCcc
Q 024752 239 LCLSATSYVTGQVICVDGGYS 259 (263)
Q Consensus 239 l~s~~~~~~~G~~i~~dgG~~ 259 (263)
|+++. .++||+.|.+|||+.
T Consensus 224 L~s~~-~~itG~~~~vdgG~~ 243 (604)
T 2et6_A 224 LSSAE-NELTGQFFEVAAGFY 243 (604)
T ss_dssp HTSSS-CCCCSCEEEEETTEE
T ss_pred HhCCc-ccCCCCEEEECCCeE
Confidence 99988 899999999999974
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-44 Score=303.66 Aligned_cols=247 Identities=23% Similarity=0.275 Sum_probs=201.2
Q ss_pred cCCCCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEeeCCchhH-----------HHHHHHHHhcCC---ceEEEec--
Q 024752 8 RWSLKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRNETEL-----------NQRIQEWKSKGL---QVSGSVC-- 69 (263)
Q Consensus 8 ~~~~~~k~vlVtGas--~giG~~~a~~l~~~g~~V~~~~r~~~~~-----------~~~~~~~~~~~~---~~~~~~~-- 69 (263)
.|++++|++|||||+ +|||+++|++|+++|++|++++|++... ++. +++.. +. ....+.+
T Consensus 3 ~~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~ 80 (297)
T 1d7o_A 3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPD-GSLMEIKKVYPLDA 80 (297)
T ss_dssp CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTT-SSBCCEEEEEEECT
T ss_pred ccccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhcc-ccccccccccccce
Confidence 467899999999999 9999999999999999999998764211 111 11110 11 0223333
Q ss_pred ------cCC----C--------HHHHHHHHHHHHhhcCCCccEEEeCCCCCC--CCCCCCCCHHHHHHHHHhhhHhHHHH
Q 024752 70 ------DLK----I--------RAQREKLMETVSSQFDGKLNILINNAGTFI--PKETTEFTEEDFSTVMTTNFESAYHL 129 (263)
Q Consensus 70 ------D~~----~--------~~~~~~~~~~~~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~ 129 (263)
|++ + +++++++++++.+++ +++|+||||||+.. ..++.+.+.++|++.+++|+.+++++
T Consensus 81 ~~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l 159 (297)
T 1d7o_A 81 VFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDF-GSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSL 159 (297)
T ss_dssp TCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHH-SCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred eccchhhhhhhhhccccccccCHHHHHHHHHHHHHHc-CCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHH
Confidence 233 2 668999999999998 89999999999764 45677889999999999999999999
Q ss_pred HHHHhHHHhhCCCceEEEEccccccccCCCC-cchhhHHHHHHHHHHHHHHHHcc-CCcEEEEEecCcccCCcccccccc
Q 024752 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMC-SIYASSKVAMNQLTKNLACEWAK-DKIRVNTVAPWVIRTPLLDTVEKD 207 (263)
Q Consensus 130 ~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~-~~Y~~sK~a~~~~~~~~a~e~~~-~gi~v~~v~PG~v~t~~~~~~~~~ 207 (263)
+++++|.|++ +|+||++||..+..+.++. ..|++||+++++|+++++.|+++ +||+||+|+||+++|++.......
T Consensus 160 ~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~~ 237 (297)
T 1d7o_A 160 LSHFLPIMNP--GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFI 237 (297)
T ss_dssp HHHHGGGEEE--EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHH
T ss_pred HHHHHHHhcc--CceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhcccc
Confidence 9999999976 4899999999999888887 68999999999999999999985 899999999999999987643211
Q ss_pred chhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCccccC
Q 024752 208 SNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVTG 262 (263)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 262 (263)
+ +.........|++++.+|+|++++++||+++.+.++||+.|++|||+++.|
T Consensus 238 ~---~~~~~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~~~~ 289 (297)
T 1d7o_A 238 D---TMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMG 289 (297)
T ss_dssp H---HHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGCS
T ss_pred H---HHHHHhhccCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCceeec
Confidence 1 112333445788899999999999999999989999999999999998765
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-43 Score=290.88 Aligned_cols=234 Identities=26% Similarity=0.372 Sum_probs=213.6
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-------eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHH
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA-------IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 84 (263)
++|++|||||++|||++++++|+++|+ +|++++|+.+..+++.+++...+.++.++.+|+++++++.++++++
T Consensus 1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 80 (244)
T 2bd0_A 1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHI 80 (244)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHH
Confidence 378999999999999999999999999 9999999999888888888776778999999999999999999999
Q ss_pred HhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchh
Q 024752 85 SSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYA 164 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~ 164 (263)
.+.+ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.++...|+
T Consensus 81 ~~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~ 159 (244)
T 2bd0_A 81 VERY-GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYC 159 (244)
T ss_dssp HHHT-SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHH
T ss_pred HHhC-CCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCCchhH
Confidence 9998 899999999999877778888999999999999999999999999999887789999999999999988999999
Q ss_pred hHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCC
Q 024752 165 SSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244 (263)
Q Consensus 165 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~ 244 (263)
+||++++.++++++.|++++||++++|+||+++|++........ ..++.+|+|+++++++++++..
T Consensus 160 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~--------------~~~~~~~~dva~~~~~l~~~~~ 225 (244)
T 2bd0_A 160 MSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEM--------------QALMMMPEDIAAPVVQAYLQPS 225 (244)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTT--------------GGGSBCHHHHHHHHHHHHTSCT
T ss_pred HHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccccc--------------cccCCCHHHHHHHHHHHHhCCc
Confidence 99999999999999999999999999999999999875432110 1156789999999999999999
Q ss_pred CCccCcEEEeCCCccc
Q 024752 245 SYVTGQVICVDGGYSV 260 (263)
Q Consensus 245 ~~~~G~~i~~dgG~~~ 260 (263)
.+++|+.+..++|...
T Consensus 226 ~~~~g~~~~~~~~~~~ 241 (244)
T 2bd0_A 226 RTVVEEIILRPTSGDI 241 (244)
T ss_dssp TEEEEEEEEEETTCCC
T ss_pred cccchheEEecccccc
Confidence 9999999999998765
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-44 Score=329.41 Aligned_cols=231 Identities=26% Similarity=0.412 Sum_probs=201.0
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
++++||+++||||++|||+++|++|+++|++|++.+|.. ++++.+++.+.+.++..+.+|++ ++.+++++++.++|
T Consensus 318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~g~~~~~~~~Dv~--~~~~~~~~~~~~~~ 393 (604)
T 2et6_A 318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAAGGEAWPDQHDVA--KDSEAIIKNVIDKY 393 (604)
T ss_dssp CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHTTCEEEEECCCHH--HHHHHHHHHHHHHH
T ss_pred cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhcCCeEEEEEcChH--HHHHHHHHHHHHhc
Confidence 478999999999999999999999999999999998743 35566777666777888888884 45678888888888
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+++|+||||||+....++.+++.++|++.|++|+.|+++++++++|+|++++.|+||++||.++..+.++...|++||+
T Consensus 394 -G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asKa 472 (604)
T 2et6_A 394 -GTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKA 472 (604)
T ss_dssp -SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHHHHHH
T ss_pred -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHHHHHH
Confidence 8999999999998878889999999999999999999999999999999888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCcc
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~ 248 (263)
|+.+|+++++.|++++||+||+|+||. .|+|....... ......+|+|++++++||+++.+. +|
T Consensus 473 al~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~~~~--------------~~~~~~~pe~vA~~v~~L~s~~~~-it 536 (604)
T 2et6_A 473 GILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIMRE--------------QDKNLYHADQVAPLLVYLGTDDVP-VT 536 (604)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC-----------------------CCSSCGGGTHHHHHHTTSTTCC-CC
T ss_pred HHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccccCch--------------hhccCCCHHHHHHHHHHHhCCccC-CC
Confidence 999999999999999999999999995 99986532111 012345899999999999999888 99
Q ss_pred CcEEEeCCCccc
Q 024752 249 GQVICVDGGYSV 260 (263)
Q Consensus 249 G~~i~~dgG~~~ 260 (263)
|+.|.+|||+..
T Consensus 537 G~~~~vdGG~~~ 548 (604)
T 2et6_A 537 GETFEIGGGWIG 548 (604)
T ss_dssp SCEEEEETTEEE
T ss_pred CcEEEECCCeeE
Confidence 999999999754
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-43 Score=295.98 Aligned_cols=242 Identities=24% Similarity=0.350 Sum_probs=204.5
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
|++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++ +.++.++.+|++++++++++++++.+++
T Consensus 1 M~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 77 (281)
T 3m1a_A 1 MSESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY---PDRAEAISLDVTDGERIDVVAADVLARY 77 (281)
T ss_dssp ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC---TTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCCceEEEeeCCCHHHHHHHHHHHHHhC
Confidence 4567899999999999999999999999999999999998877766543 4578999999999999999999999998
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+++|+||||||+....++.+.+.++|++.+++|+.|+++++++++|.|++++.++||++||..+..+.++...|++||+
T Consensus 78 -g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 156 (281)
T 3m1a_A 78 -GRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKA 156 (281)
T ss_dssp -SCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHH
T ss_pred -CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHHHHH
Confidence 8999999999998778888899999999999999999999999999999888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccc-----cchhHH---HHHHhHhcCCCCCCCChhhHHHHHHHHc
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEK-----DSNFLE---HANRMVLRTPMLRPGEPNEVSSVVAFLC 240 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~-----~~~~~~---~~~~~~~~~~~~~~~~~~~va~~~~~l~ 240 (263)
+++.++++++.|++++||++++|+||+++|++...... ...+.. .........+..++.+|+|+|+++++++
T Consensus 157 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~ 236 (281)
T 3m1a_A 157 ALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAAIRLAL 236 (281)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999998654221 111111 1123344567788899999999999999
Q ss_pred CCCCCCccCcEEEeCCC
Q 024752 241 LSATSYVTGQVICVDGG 257 (263)
Q Consensus 241 s~~~~~~~G~~i~~dgG 257 (263)
+... .|..+++.++
T Consensus 237 ~~~~---~~~~~~l~s~ 250 (281)
T 3m1a_A 237 DTEK---TPLRLALGGD 250 (281)
T ss_dssp HSSS---CCSEEEESHH
T ss_pred hCCC---CCeEEecCch
Confidence 7654 3667777654
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-43 Score=300.02 Aligned_cols=233 Identities=23% Similarity=0.356 Sum_probs=200.4
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
+++||++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++.+|++++++++++++++.+.+
T Consensus 28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~- 106 (301)
T 3tjr_A 28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLL- 106 (301)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhC-
Confidence 3889999999999999999999999999999999999999999999998888889999999999999999999999998
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccccccCCCCcchhhHHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+++|+||||||+....++.+.+.++|++.+++|+.|+++++++++|.|++++ .|+||++||..+..+.++...|++||+
T Consensus 107 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 186 (301)
T 3tjr_A 107 GGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKY 186 (301)
T ss_dssp SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHHHHH
Confidence 8999999999999888888899999999999999999999999999998876 789999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHH-----HHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLE-----HANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
+++.|+++++.|++++||+|++|+||+|+|++............ ....+........+.+|+|+|+.++..+...
T Consensus 187 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l~~~ 266 (301)
T 3tjr_A 187 GVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAILAN 266 (301)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999765322111000 0011111112335678999999998877543
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-43 Score=303.47 Aligned_cols=234 Identities=24% Similarity=0.402 Sum_probs=204.8
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEe---------eCCchhHHHHHHHHHhcCCceEEEeccCCCHHHH
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTC---------SRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQR 77 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~---------~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 77 (263)
..+++++|++|||||++|||++++++|+++|++|++. +|+.+.+++..+++...+..+ .+|+++.+++
T Consensus 3 ~~~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~---~~D~~~~~~~ 79 (319)
T 1gz6_A 3 SPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKA---VANYDSVEAG 79 (319)
T ss_dssp CCCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEE---EEECCCGGGH
T ss_pred CCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeE---EEeCCCHHHH
Confidence 3478999999999999999999999999999999996 457788888888887655433 4899999999
Q ss_pred HHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC
Q 024752 78 EKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI 157 (263)
Q Consensus 78 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~ 157 (263)
+++++++.+.+ +++|+||||||+....++.+.+.++|++.|++|+.|+++++++++|.|++++.++||++||..+..+.
T Consensus 80 ~~~~~~~~~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~ 158 (319)
T 1gz6_A 80 EKLVKTALDTF-GRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGN 158 (319)
T ss_dssp HHHHHHHHHHT-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC
T ss_pred HHHHHHHHHHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCC
Confidence 99999999998 89999999999987777788899999999999999999999999999998878999999999998888
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHH
Q 024752 158 PMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVA 237 (263)
Q Consensus 158 ~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~ 237 (263)
++...|++||++++.|+++++.|++++||+||+|+||++ |++...... ... . ...+|+|++++++
T Consensus 159 ~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~~-~~~----~---------~~~~p~dvA~~~~ 223 (319)
T 1gz6_A 159 FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVMP-EDL----V---------EALKPEYVAPLVL 223 (319)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGSC-HHH----H---------HHSCGGGTHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccCC-hhh----h---------ccCCHHHHHHHHH
Confidence 889999999999999999999999999999999999998 877543211 100 1 1247999999999
Q ss_pred HHcCCCCCCccCcEEEeCCCccc
Q 024752 238 FLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 238 ~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
||+++. .+++|+.|.+|||+..
T Consensus 224 ~l~s~~-~~~tG~~~~v~GG~~~ 245 (319)
T 1gz6_A 224 WLCHES-CEENGGLFEVGAGWIG 245 (319)
T ss_dssp HHTSTT-CCCCSCEEEEETTEEE
T ss_pred HHhCch-hhcCCCEEEECCCeEE
Confidence 999874 5799999999999764
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-44 Score=301.35 Aligned_cols=238 Identities=20% Similarity=0.212 Sum_probs=191.6
Q ss_pred Cccccc-ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHH
Q 024752 1 MSDFRE-QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREK 79 (263)
Q Consensus 1 ~~~~~~-~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 79 (263)
|+.|.. +.++++||+++||||++|||++++++|+++|++|++++|+.++.++..+++ +.++.++.+|+++++++++
T Consensus 3 m~~~~~~~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~v~~ 79 (291)
T 3rd5_A 3 MTGWTAADLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM---AGQVEVRELDLQDLSSVRR 79 (291)
T ss_dssp -CCCCGGGCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS---SSEEEEEECCTTCHHHHHH
T ss_pred CCCCChhhccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---cCCeeEEEcCCCCHHHHHH
Confidence 555553 445799999999999999999999999999999999999998887776554 5678999999999999999
Q ss_pred HHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc---
Q 024752 80 LMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA--- 156 (263)
Q Consensus 80 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~--- 156 (263)
+++++ +++|+||||||+..+. .+.+.++|++.+++|+.|+++++++++|.|.+ +||++||..+..+
T Consensus 80 ~~~~~-----~~iD~lv~nAg~~~~~--~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~----riv~isS~~~~~~~~~ 148 (291)
T 3rd5_A 80 FADGV-----SGADVLINNAGIMAVP--YALTVDGFESQIGTNHLGHFALTNLLLPRLTD----RVVTVSSMAHWPGRIN 148 (291)
T ss_dssp HHHTC-----CCEEEEEECCCCCSCC--CCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE----EEEEECCGGGTTCCCC
T ss_pred HHHhc-----CCCCEEEECCcCCCCc--ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh----heeEeechhhccCCCC
Confidence 88765 6899999999987543 45678899999999999999999999999865 8999999988755
Q ss_pred ----------CCCCcchhhHHHHHHHHHHHHHHHHccCC--cEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCC
Q 024752 157 ----------IPMCSIYASSKVAMNQLTKNLACEWAKDK--IRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPML 224 (263)
Q Consensus 157 ----------~~~~~~Y~~sK~a~~~~~~~~a~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (263)
.++...|++||++++.|+++++.|++++| |++|+|+||+|+|++........ .......+..
T Consensus 149 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~------~~~~~~~~~~ 222 (291)
T 3rd5_A 149 LEDLNWRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKL------GDALMSAATR 222 (291)
T ss_dssp SSCTTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC------------------------
T ss_pred cccccccccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHH------HHHHHHHHHH
Confidence 23456799999999999999999999888 99999999999999986643211 1112234555
Q ss_pred CCCC-hhhHHHHHHHHcCCCCCCccCcEEEeCCCccc
Q 024752 225 RPGE-PNEVSSVVAFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 225 ~~~~-~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
+... |+|+|++++||+++ ++++|+.|.+|||+.-
T Consensus 223 ~~~~~~~~~A~~~~~l~~~--~~~~G~~~~vdgG~~~ 257 (291)
T 3rd5_A 223 VVATDADFGARQTLYAASQ--DLPGDSFVGPRFGYLG 257 (291)
T ss_dssp --CHHHHHHHHHHHHHHHS--CCCTTCEEEETTSSSS
T ss_pred HHhCCHHHHHHHHHHHHcC--CCCCCceeCCcccccC
Confidence 5554 99999999999998 4899999999999864
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-43 Score=288.11 Aligned_cols=225 Identities=19% Similarity=0.188 Sum_probs=188.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
|++|||||++|||++++++|+++|++|++++|+++.+++..+++ +.++.++.+|++++++++++++++.+ .+|
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~----~~d 74 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL---SNNVGYRARDLASHQEVEQLFEQLDS----IPS 74 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC---SSCCCEEECCTTCHHHHHHHHHSCSS----CCS
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---hhccCeEeecCCCHHHHHHHHHHHhh----cCC
Confidence 68999999999999999999999999999999998887776655 45688999999999999999887643 349
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHHHH
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQL 173 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~ 173 (263)
++|||||+....++.+.+.++|++.+++|+.++++++++++|.|++++. +||++||..+..+.++...|++||++++.|
T Consensus 75 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~iv~isS~~~~~~~~~~~~Y~asKaa~~~~ 153 (230)
T 3guy_A 75 TVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPV-NVVMIMSTAAQQPKAQESTYCAVKWAVKGL 153 (230)
T ss_dssp EEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCC-EEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred EEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-eEEEEeecccCCCCCCCchhHHHHHHHHHH
Confidence 9999999988888888999999999999999999999999999988754 999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcC-CCCCCccCcEE
Q 024752 174 TKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCL-SATSYVTGQVI 252 (263)
Q Consensus 174 ~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s-~~~~~~~G~~i 252 (263)
+++++.|++++||+||+|+||+++|++...... ..|.+++.+|+|++++++++++ +...++||+.+
T Consensus 154 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-------------~~~~~~~~~~~dvA~~i~~l~~~~~~~~itg~~~ 220 (230)
T 3guy_A 154 IESVRLELKGKPMKIIAVYPGGMATEFWETSGK-------------SLDTSSFMSAEDAALMIHGALANIGNGYVSDITV 220 (230)
T ss_dssp HHHHHHHTTTSSCEEEEEEECCC-----------------------------CCCHHHHHHHHHHHCCEETTEEEEEEEE
T ss_pred HHHHHHHHHhcCeEEEEEECCcccChHHHhcCC-------------CCCcccCCCHHHHHHHHHHHHhCcCCCCccceee
Confidence 999999999999999999999999998754322 2356778899999999999887 77889999999
Q ss_pred EeCCCcc
Q 024752 253 CVDGGYS 259 (263)
Q Consensus 253 ~~dgG~~ 259 (263)
..+....
T Consensus 221 ~~~~~~~ 227 (230)
T 3guy_A 221 NREGHHH 227 (230)
T ss_dssp EC-----
T ss_pred cCCCCCC
Confidence 9887543
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-42 Score=288.11 Aligned_cols=242 Identities=24% Similarity=0.335 Sum_probs=206.1
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcC--CceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG--LQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+ .++.++.+|++++++++++++++.+.
T Consensus 29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 108 (279)
T 1xg5_A 29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ 108 (279)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 4889999999999999999999999999999999999998888888887654 46888999999999999999999998
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCC--ceEEEEcccccc--ccCCCCcch
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGN--GNIIFISSVAGV--IAIPMCSIY 163 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~iv~vsS~~~~--~~~~~~~~Y 163 (263)
+ +++|+||||||+....++.+.+.++|++.+++|+.+++.+++.++|.|++++. ++||++||..+. .+.++...|
T Consensus 109 ~-g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y 187 (279)
T 1xg5_A 109 H-SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFY 187 (279)
T ss_dssp H-CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHH
T ss_pred C-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCCchh
Confidence 8 78999999999988778888899999999999999999999999999998763 899999999887 566677889
Q ss_pred hhHHHHHHHHHHHHHHHHc--cCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcC
Q 024752 164 ASSKVAMNQLTKNLACEWA--KDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCL 241 (263)
Q Consensus 164 ~~sK~a~~~~~~~~a~e~~--~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s 241 (263)
+++|++++.|+++++.|++ +.||++++|+||+++|++......... .......+..++.+|+|+|++++++++
T Consensus 188 ~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~-----~~~~~~~~~~~~~~~~dvA~~i~~l~~ 262 (279)
T 1xg5_A 188 SATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDP-----EKAAATYEQMKCLKPEDVAEAVIYVLS 262 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCH-----HHHHHHHC---CBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccCh-----hHHhhhcccccCCCHHHHHHHHHHHhc
Confidence 9999999999999999998 889999999999999998533222111 111112244567899999999999999
Q ss_pred CCCCCccCcEEEeCCC
Q 024752 242 SATSYVTGQVICVDGG 257 (263)
Q Consensus 242 ~~~~~~~G~~i~~dgG 257 (263)
+...+.+|+....++|
T Consensus 263 ~~~~~~~g~i~i~~~~ 278 (279)
T 1xg5_A 263 TPAHIQIGDIQMRPTG 278 (279)
T ss_dssp SCTTEEEEEEEEEETT
T ss_pred CCcceEeeeEEEccCC
Confidence 8887888876555444
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-43 Score=291.45 Aligned_cols=225 Identities=17% Similarity=0.109 Sum_probs=197.3
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
..++|+++||||++|||++++++|+++|++|++++|+++..+ ....++.+|++++++++++++++.++++
T Consensus 4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 73 (241)
T 1dhr_A 4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----------SASVIVKMTDSFTEQADQVTAEVGKLLG 73 (241)
T ss_dssp --CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----------SEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc----------CCcEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 456899999999999999999999999999999999976532 1356788999999999999999999874
Q ss_pred -CCccEEEeCCCCCCCCCC-CCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 90 -GKLNILINNAGTFIPKET-TEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 90 -~~id~li~~ag~~~~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+++|+||||||+....++ .+.+.++|++.+++|+.++++++++++|.|++ +|+||++||..+..+.++...|++||
T Consensus 74 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK 151 (241)
T 1dhr_A 74 DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGYGMAK 151 (241)
T ss_dssp TCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHH
T ss_pred CCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCEEEEECCHHHccCCCCchHHHHHH
Confidence 589999999998877776 77889999999999999999999999999976 48999999999999989999999999
Q ss_pred HHHHHHHHHHHHHHc--cCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCC
Q 024752 168 VAMNQLTKNLACEWA--KDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~--~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~ 245 (263)
++++.++++++.|++ ++||+||+|+||+++|++........ +.....+|+|+|+.+++++++...
T Consensus 152 ~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~-------------~~~~~~~~~~vA~~v~~l~~~~~~ 218 (241)
T 1dhr_A 152 GAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEA-------------DFSSWTPLEFLVETFHDWITGNKR 218 (241)
T ss_dssp HHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTS-------------CGGGSEEHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCcch-------------hhccCCCHHHHHHHHHHHhcCCCc
Confidence 999999999999999 89999999999999999865432111 112235689999999999999999
Q ss_pred CccCcEEEeCCCcc
Q 024752 246 YVTGQVICVDGGYS 259 (263)
Q Consensus 246 ~~~G~~i~~dgG~~ 259 (263)
+++|+.+.+|||..
T Consensus 219 ~~~G~~~~v~g~~~ 232 (241)
T 1dhr_A 219 PNSGSLIQVVTTDG 232 (241)
T ss_dssp CCTTCEEEEEEETT
T ss_pred CccceEEEEeCCCC
Confidence 99999999999864
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-43 Score=291.80 Aligned_cols=241 Identities=24% Similarity=0.334 Sum_probs=200.5
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc--CCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
.+++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.+. +.++.++.+|++++++++++++++.++
T Consensus 4 m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (267)
T 2gdz_A 4 MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH 83 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence 367999999999999999999999999999999999998888777776542 346889999999999999999999999
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC---CceEEEEccccccccCCCCcchh
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG---NGNIIFISSVAGVIAIPMCSIYA 164 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~iv~vsS~~~~~~~~~~~~Y~ 164 (263)
+ +++|+||||||+.. .++|++.+++|+.+++.+++.++|.|++++ .++||++||..+..+.++...|+
T Consensus 84 ~-g~id~lv~~Ag~~~--------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~ 154 (267)
T 2gdz_A 84 F-GRLDILVNNAGVNN--------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYC 154 (267)
T ss_dssp H-SCCCEEEECCCCCC--------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHH
T ss_pred c-CCCCEEEECCCCCC--------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHH
Confidence 8 89999999999752 356899999999999999999999998753 68999999999999888899999
Q ss_pred hHHHHHHHHHHHH--HHHHccCCcEEEEEecCcccCCccccccccchhH---HHHHHhHhcCCCCCCCChhhHHHHHHHH
Q 024752 165 SSKVAMNQLTKNL--ACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFL---EHANRMVLRTPMLRPGEPNEVSSVVAFL 239 (263)
Q Consensus 165 ~sK~a~~~~~~~~--a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~va~~~~~l 239 (263)
+||++++.+++++ +.|+++.||+||+|+||+++|++........... ..........+...+.+|+|+|+++++|
T Consensus 155 ~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l 234 (267)
T 2gdz_A 155 ASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITL 234 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHHHHHHHHHHH
Confidence 9999999999995 6899999999999999999999865432111000 0001111111223467899999999999
Q ss_pred cCCCCCCccCcEEEeCCCcccc
Q 024752 240 CLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 240 ~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
+++. +++|+.|++|||...+
T Consensus 235 ~s~~--~~~G~~~~v~gg~~~~ 254 (267)
T 2gdz_A 235 IEDD--ALNGAIMKITTSKGIH 254 (267)
T ss_dssp HHCT--TCSSCEEEEETTTEEE
T ss_pred hcCc--CCCCcEEEecCCCccc
Confidence 9875 4899999999987654
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-42 Score=281.31 Aligned_cols=230 Identities=23% Similarity=0.278 Sum_probs=192.7
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
+..+|+++||||++|||++++++|+++|++|++++|+++.++++.+++. ++.++.+|++++++++++++++.+.+
T Consensus 2 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~- 76 (234)
T 2ehd_A 2 EGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE----GALPLPGDVREEGDWARAVAAMEEAF- 76 (234)
T ss_dssp --CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh----hceEEEecCCCHHHHHHHHHHHHHHc-
Confidence 3457999999999999999999999999999999999888776665542 57889999999999999999999998
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
+++|++|||||+....++.+.+.++|++.+++|+.+++++++.++|.|++++.++||++||..+..+.++...|+++|++
T Consensus 77 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a 156 (234)
T 2ehd_A 77 GELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFG 156 (234)
T ss_dssp SCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhhHHHHH
Confidence 79999999999987777788899999999999999999999999999998888999999999999888889999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccC
Q 024752 170 MNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTG 249 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G 249 (263)
++.++++++.|++++||++++|+||+++|++...... .+ .+.+|+|+|+++++++++...+++|
T Consensus 157 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---------~~-------~~~~~~dvA~~~~~l~~~~~~~~~g 220 (234)
T 2ehd_A 157 LLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNTPG---------QA-------WKLKPEDVAQAVLFALEMPGHAMVS 220 (234)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEECC--------------------------------CCHHHHHHHHHHHHHSCCSSCCC
T ss_pred HHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccccc---------cc-------CCCCHHHHHHHHHHHhCCCcccccc
Confidence 9999999999999999999999999999998653210 00 1468999999999999998899999
Q ss_pred cEEEeCCCccc
Q 024752 250 QVICVDGGYSV 260 (263)
Q Consensus 250 ~~i~~dgG~~~ 260 (263)
+.+..++....
T Consensus 221 ~~~~~~~~~~~ 231 (234)
T 2ehd_A 221 EIELRPTRPTS 231 (234)
T ss_dssp EEECCC-----
T ss_pred eEEEeecCCCC
Confidence 98877665543
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-43 Score=322.47 Aligned_cols=235 Identities=24% Similarity=0.387 Sum_probs=191.8
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeC---------CchhHHHHHHHHHhcCCceEEEeccCCCHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR---------NETELNQRIQEWKSKGLQVSGSVCDLKIRAQ 76 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 76 (263)
...++++||++|||||++|||+++|++|+++|++|++++| +.+.++++.+++...+..+ .+|+++.++
T Consensus 12 ~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~D~~d~~~ 88 (613)
T 3oml_A 12 DGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEA---VADYNSVID 88 (613)
T ss_dssp ---CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCE---EECCCCGGG
T ss_pred ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeE---EEEeCCHHH
Confidence 5567899999999999999999999999999999999988 7777888888888766654 379999999
Q ss_pred HHHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc
Q 024752 77 REKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA 156 (263)
Q Consensus 77 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~ 156 (263)
++++++++.+.+ +++|+||||||+....++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||.++..+
T Consensus 89 ~~~~~~~~~~~~-g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~ 167 (613)
T 3oml_A 89 GAKVIETAIKAF-GRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYG 167 (613)
T ss_dssp HHHHHC-----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHC
T ss_pred HHHHHHHHHHHC-CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCC
Confidence 999999999998 8999999999999888888999999999999999999999999999999988899999999999999
Q ss_pred CCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHH
Q 024752 157 IPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVV 236 (263)
Q Consensus 157 ~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~ 236 (263)
.++...|++||+|+++|+++++.|++++||+||+|+||.+ |++........ .....+|+|+++++
T Consensus 168 ~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~~~~--------------~~~~~~pedvA~~v 232 (613)
T 3oml_A 168 NFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGILPDI--------------LFNELKPKLIAPVV 232 (613)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCCCHH--------------HHTTCCGGGTHHHH
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhccchh--------------hhhcCCHHHHHHHH
Confidence 9999999999999999999999999999999999999975 55554332111 01234799999999
Q ss_pred HHHcCCCCCCccCcEEEeCCCccc
Q 024752 237 AFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 237 ~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
+||+++. .++||+.|.+|||+..
T Consensus 233 ~~L~s~~-~~~tG~~i~vdGG~~~ 255 (613)
T 3oml_A 233 AYLCHES-CEDNGSYIESAAGWAT 255 (613)
T ss_dssp HHTTSTT-CCCCSCEEEEETTEEE
T ss_pred HHhcCCC-cCCCceEEEECCCeEE
Confidence 9999988 8999999999999875
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-43 Score=300.87 Aligned_cols=242 Identities=12% Similarity=0.040 Sum_probs=204.0
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHH-CCCeEEEeeCCchhHH------------HHHHHHHhcCCceEEEeccCCCHHH
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAA-FGAIVHTCSRNETELN------------QRIQEWKSKGLQVSGSVCDLKIRAQ 76 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~-~g~~V~~~~r~~~~~~------------~~~~~~~~~~~~~~~~~~D~~~~~~ 76 (263)
.-.+|++|||||++|||+++++.|++ +|++|++++|+.+..+ ...+++.+.+.++..+.+|++++++
T Consensus 44 ~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~ 123 (405)
T 3zu3_A 44 ANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEI 123 (405)
T ss_dssp TTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHH
T ss_pred CCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence 45689999999999999999999999 9999999998765432 2344556667789999999999999
Q ss_pred HHHHHHHHHhhcCCCccEEEeCCCCC-------------CCCCC---------------------CCCCHHHHHHHHHhh
Q 024752 77 REKLMETVSSQFDGKLNILINNAGTF-------------IPKET---------------------TEFTEEDFSTVMTTN 122 (263)
Q Consensus 77 ~~~~~~~~~~~~~~~id~li~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n 122 (263)
++++++++.++| |++|+||||||.. ...++ .+.+.++|++.+++|
T Consensus 124 v~~~v~~i~~~~-G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn 202 (405)
T 3zu3_A 124 KQLTIDAIKQDL-GQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVM 202 (405)
T ss_dssp HHHHHHHHHHHT-SCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc-CCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhh
Confidence 999999999999 8999999999985 23444 678999999999999
Q ss_pred hHhHH-HHHHHHhH-HHhhCCCceEEEEccccccccCCCC--cchhhHHHHHHHHHHHHHHHHccC-CcEEEEEecCccc
Q 024752 123 FESAY-HLSQLAHP-LLKSAGNGNIIFISSVAGVIAIPMC--SIYASSKVAMNQLTKNLACEWAKD-KIRVNTVAPWVIR 197 (263)
Q Consensus 123 ~~~~~-~~~~~~~~-~~~~~~~~~iv~vsS~~~~~~~~~~--~~Y~~sK~a~~~~~~~~a~e~~~~-gi~v~~v~PG~v~ 197 (263)
..+.+ .+++++++ .|.+ ++|+||++||+.+..+.|.+ ..|++||+++++++++++.|++++ |||||+|+||++.
T Consensus 203 ~~~~~~~~~~~~~~~~m~~-~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~ 281 (405)
T 3zu3_A 203 GGEDWQMWIDALLDAGVLA-EGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVV 281 (405)
T ss_dssp SSHHHHHHHHHHHHHTCEE-EEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCC
T ss_pred chhHHHHHHHHHHHHhhhh-CCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCc
Confidence 99998 78888765 4444 46899999999999998887 999999999999999999999999 9999999999999
Q ss_pred CCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 198 TPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 198 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
|++....+..+... ... ..|+++.+.|||+++.+.||+++ ++.|+.+.+|++.+++
T Consensus 282 T~~s~~ip~~p~y~---~~l--~~~mkr~G~~Ed~a~~i~~L~sd---~l~~~~~~~D~~~~~r 337 (405)
T 3zu3_A 282 SQASSAIPMMPLYL---SLL--FKVMKEKGTHEGCIEQVYSLYKD---SLCGDSPHMDQEGRLR 337 (405)
T ss_dssp CHHHHTSTTHHHHH---HHH--HHHHHHHTCCCCHHHHHHHHHHH---TTSSSCCCBCTTSCEE
T ss_pred CchhhcCCCCcHHH---HHH--HHHHhcCCCcHHHHHHHHHHHhc---cccCCCCCcCCCcCCC
Confidence 99876654322211 111 12678889999999999999997 6789999999987653
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-43 Score=288.83 Aligned_cols=225 Identities=16% Similarity=0.162 Sum_probs=196.5
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC-
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD- 89 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~- 89 (263)
|++|++|||||++|||++++++|+++|++|++++|+++..+ ....++.+|++++++++++++++.+.++
T Consensus 1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 70 (236)
T 1ooe_A 1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----------DSNILVDGNKNWTEQEQSILEQTASSLQG 70 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----------SEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc----------cccEEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 46899999999999999999999999999999999986532 1356788999999999999999998874
Q ss_pred CCccEEEeCCCCCCCCCC-CCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 90 GKLNILINNAGTFIPKET-TEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+++|+||||||+....++ .+.+.++|++.+++|+.++++++++++|.|++ .++||++||..+..+.++...|++||+
T Consensus 71 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sK~ 148 (236)
T 1ooe_A 71 SQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPTPSMIGYGMAKA 148 (236)
T ss_dssp CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHH
T ss_pred CCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEECchhhccCCCCcHHHHHHHH
Confidence 589999999998877666 67889999999999999999999999999975 589999999999999899999999999
Q ss_pred HHHHHHHHHHHHHc--cCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHH-HHcCCCCC
Q 024752 169 AMNQLTKNLACEWA--KDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVA-FLCLSATS 245 (263)
Q Consensus 169 a~~~~~~~~a~e~~--~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~-~l~s~~~~ 245 (263)
+++.|+++++.|++ ++||+||+|+||+++|++........ +..+..+|+|+|+.++ +|+++...
T Consensus 149 a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-------------~~~~~~~~~dvA~~i~~~l~s~~~~ 215 (236)
T 1ooe_A 149 AVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPNA-------------DHSSWTPLSFISEHLLKWTTETSSR 215 (236)
T ss_dssp HHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTTC-------------CGGGCBCHHHHHHHHHHHHHCGGGC
T ss_pred HHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCCCc-------------cccccCCHHHHHHHHHHHHcCCCcc
Confidence 99999999999998 89999999999999999865432111 1123457999999998 66688889
Q ss_pred CccCcEEEeCCCccc
Q 024752 246 YVTGQVICVDGGYSV 260 (263)
Q Consensus 246 ~~~G~~i~~dgG~~~ 260 (263)
+++|+.|.+|||...
T Consensus 216 ~~~G~~~~v~gg~~~ 230 (236)
T 1ooe_A 216 PSSGALLKITTENGT 230 (236)
T ss_dssp CCTTCEEEEEEETTE
T ss_pred cccccEEEEecCCCc
Confidence 999999999999754
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-42 Score=292.28 Aligned_cols=234 Identities=21% Similarity=0.305 Sum_probs=192.9
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCC--ceEEEeccCCCHHHHHHHHHHHHh
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL--QVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
+++++|++|||||++|||++++++|+++|++|++++|+.++++++.+++...+. ++.++.+|+++++++.++++++.+
T Consensus 4 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 83 (319)
T 3ioy_A 4 KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEA 83 (319)
T ss_dssp CCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 468899999999999999999999999999999999999999999988876554 799999999999999999999999
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC------CCceEEEEccccccccCCCC
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA------GNGNIIFISSVAGVIAIPMC 160 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~~~iv~vsS~~~~~~~~~~ 160 (263)
.+ +++|+||||||+....++.+.+.++|++.+++|+.|+++++++++|.|.++ +.|+||++||.++..+.++.
T Consensus 84 ~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~~ 162 (319)
T 3ioy_A 84 RF-GPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSP 162 (319)
T ss_dssp HT-CCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSSS
T ss_pred hC-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCCC
Confidence 98 899999999999888888899999999999999999999999999999875 57899999999999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHH-HH----HH-hHhcCCC-CCCCChhhHH
Q 024752 161 SIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLE-HA----NR-MVLRTPM-LRPGEPNEVS 233 (263)
Q Consensus 161 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~-~~----~~-~~~~~~~-~~~~~~~~va 233 (263)
..|++||+|+++|+++++.|+.++||+|++|+||+|+|++............ .. .. .....+. ....+|++++
T Consensus 163 ~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~vA 242 (319)
T 3ioy_A 163 GIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVIG 242 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGGSSBCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCHHHHH
Confidence 9999999999999999999999999999999999999998765322211100 00 00 0000011 1126899999
Q ss_pred HHHHHHcCCC
Q 024752 234 SVVAFLCLSA 243 (263)
Q Consensus 234 ~~~~~l~s~~ 243 (263)
+.++..+...
T Consensus 243 ~~~~~al~~~ 252 (319)
T 3ioy_A 243 ARVIEAMKAN 252 (319)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHcC
Confidence 9998876544
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-43 Score=289.88 Aligned_cols=226 Identities=17% Similarity=0.154 Sum_probs=198.2
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
..+.-+|++|||||++|||++++++|+++|++|++++|+.+..+ ...+.+|++|+++++++++++.++
T Consensus 17 ~~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~------------~~~~~~d~~d~~~v~~~~~~~~~~ 84 (251)
T 3orf_A 17 RGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA------------DHSFTIKDSGEEEIKSVIEKINSK 84 (251)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS------------SEEEECSCSSHHHHHHHHHHHHTT
T ss_pred cccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------------ccceEEEeCCHHHHHHHHHHHHHH
Confidence 33455899999999999999999999999999999999986532 235789999999999999999999
Q ss_pred cCCCccEEEeCCCCCCCCC-CCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhH
Q 024752 88 FDGKLNILINNAGTFIPKE-TTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASS 166 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s 166 (263)
+ +++|+||||||+....+ +.+.+.++|++.+++|+.++++++++++|.|++ +|+||++||..+..+.++...|++|
T Consensus 85 ~-g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~s 161 (251)
T 3orf_A 85 S-IKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ--GGLFVLTGASAALNRTSGMIAYGAT 161 (251)
T ss_dssp T-CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHH
T ss_pred c-CCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc--CCEEEEEechhhccCCCCCchhHHH
Confidence 8 89999999999887654 677889999999999999999999999999976 5899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHc--cCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCC-C
Q 024752 167 KVAMNQLTKNLACEWA--KDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS-A 243 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~--~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~-~ 243 (263)
|++++.++++++.|++ ++||+|++|+||+|+|++....... .+..++.+|+|+++++++|+++ .
T Consensus 162 Kaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~~~-------------~~~~~~~~~~dva~~i~~l~~~~~ 228 (251)
T 3orf_A 162 KAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMSD-------------ANFDDWTPLSEVAEKLFEWSTNSD 228 (251)
T ss_dssp HHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHCTT-------------SCGGGSBCHHHHHHHHHHHHHCGG
T ss_pred HHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhccc-------------ccccccCCHHHHHHHHHHHhcCcc
Confidence 9999999999999987 8899999999999999986543322 2455678899999999999998 8
Q ss_pred CCCccCcEEEeCCCcccc
Q 024752 244 TSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 244 ~~~~~G~~i~~dgG~~~~ 261 (263)
+.+++|+.|.+++|...+
T Consensus 229 ~~~~tG~~i~v~~g~~~~ 246 (251)
T 3orf_A 229 SRPTNGSLVKFETKSKVT 246 (251)
T ss_dssp GCCCTTCEEEEEEETTEE
T ss_pred ccCCcceEEEEecCCccc
Confidence 899999999999887543
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-42 Score=286.97 Aligned_cols=234 Identities=21% Similarity=0.278 Sum_probs=192.5
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEeeCCchhHHHHHHHHHhc--CCceEEEeccCCCH-HHHHHHHHHH
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAI-VHTCSRNETELNQRIQEWKSK--GLQVSGSVCDLKIR-AQREKLMETV 84 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~-~~~~~~~~~~ 84 (263)
|++++|+++||||++|||++++++|+++|++ |++++|+... +..+++.+. +.++.++.+|++++ ++++++++++
T Consensus 1 m~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (254)
T 1sby_A 1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKI 78 (254)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHH
Confidence 4689999999999999999999999999996 9999998742 222333322 45688999999998 9999999999
Q ss_pred HhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC---CceEEEEccccccccCCCCc
Q 024752 85 SSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG---NGNIIFISSVAGVIAIPMCS 161 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~iv~vsS~~~~~~~~~~~ 161 (263)
.+.+ +++|+||||||+. +.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+..+.++..
T Consensus 79 ~~~~-g~id~lv~~Ag~~--------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~ 149 (254)
T 1sby_A 79 FDQL-KTVDILINGAGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVP 149 (254)
T ss_dssp HHHH-SCCCEEEECCCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSH
T ss_pred HHhc-CCCCEEEECCccC--------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCch
Confidence 9998 8999999999974 3467899999999999999999999997754 58999999999999988999
Q ss_pred chhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcC
Q 024752 162 IYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCL 241 (263)
Q Consensus 162 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s 241 (263)
.|++||++++.++++++.++.++||+|++|+||+++|++.....................|. .+|+|+|+.++++++
T Consensus 150 ~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~dvA~~i~~~~~ 226 (254)
T 1sby_A 150 VYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPT---QTSEQCGQNFVKAIE 226 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCC---EEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhcCCC---CCHHHHHHHHHHHHH
Confidence 99999999999999999999888999999999999999875432110000001122222333 379999999999885
Q ss_pred CCCCCccCcEEEeCCCcc
Q 024752 242 SATSYVTGQVICVDGGYS 259 (263)
Q Consensus 242 ~~~~~~~G~~i~~dgG~~ 259 (263)
.+.+|+.+.+|||..
T Consensus 227 ---~~~~G~~~~v~gG~~ 241 (254)
T 1sby_A 227 ---ANKNGAIWKLDLGTL 241 (254)
T ss_dssp ---HCCTTCEEEEETTEE
T ss_pred ---cCCCCCEEEEeCCce
Confidence 467899999999953
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-43 Score=304.30 Aligned_cols=244 Identities=16% Similarity=0.129 Sum_probs=202.0
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHH-CCCeEEEeeCCchhHH------------HHHHHHHhcCCceEEEeccCCCHHHH
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAA-FGAIVHTCSRNETELN------------QRIQEWKSKGLQVSGSVCDLKIRAQR 77 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~-~g~~V~~~~r~~~~~~------------~~~~~~~~~~~~~~~~~~D~~~~~~~ 77 (263)
..+|++|||||++|||+++|+.|++ +|++|++++|+.+..+ .+.+++...+.++..+.+|+++++++
T Consensus 59 ~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v 138 (422)
T 3s8m_A 59 DGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAAR 138 (422)
T ss_dssp SSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred cCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHH
Confidence 3589999999999999999999999 9999999999876543 23455666788899999999999999
Q ss_pred HHHHHHHHhhcCCCccEEEeCCCCC-------------CCCCC---------------------CCCCHHHHHHHHHhhh
Q 024752 78 EKLMETVSSQFDGKLNILINNAGTF-------------IPKET---------------------TEFTEEDFSTVMTTNF 123 (263)
Q Consensus 78 ~~~~~~~~~~~~~~id~li~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n~ 123 (263)
+++++++.++++|++|+||||||.. ...++ .+.+.++|++.+++|.
T Consensus 139 ~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~ 218 (422)
T 3s8m_A 139 AQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMG 218 (422)
T ss_dssp HHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhc
Confidence 9999999999756899999999972 23344 3579999999999999
Q ss_pred HhHH-HHHHHHhHHHhhCCCceEEEEccccccccCCCC--cchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCc
Q 024752 124 ESAY-HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMC--SIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPL 200 (263)
Q Consensus 124 ~~~~-~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~--~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~ 200 (263)
.+.+ .+++++++.+..+++|+||++||+.+..+.|.+ .+|++||+|+.+|+++++.|++++|||||+|+||+|.|++
T Consensus 219 ~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~ 298 (422)
T 3s8m_A 219 GQDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQA 298 (422)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTT
T ss_pred hhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChh
Confidence 9987 788887754333346899999999999887766 8999999999999999999999999999999999999999
Q ss_pred cccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCcc-CcEEEeCCCccc
Q 024752 201 LDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT-GQVICVDGGYSV 260 (263)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~-G~~i~~dgG~~~ 260 (263)
....+..+... . ....|+++.+.|||+++.+.||+++.- |.+ |+...+|++-.+
T Consensus 299 ~~~ip~~~~~~---~--~~~~~m~r~G~pEdva~~v~~L~sd~l-y~~~~~~~~~d~~~~~ 353 (422)
T 3s8m_A 299 SAAIPVMPLYI---S--MVYKIMKEKGLHEGTIEQLDRLFRERL-YRQDGQPAEVDEQNRL 353 (422)
T ss_dssp GGGSTHHHHHH---H--HHHHHHHHTTCCCCHHHHHHHHHHHTT-TCTTCCCCCCCTTSCE
T ss_pred hhcCCCChHHH---H--HHHhhhcCCcChHHHHHHHHHHhcchh-hccCCCCcccCCCCCC
Confidence 87654332211 1 112278889999999999999999865 665 777668887654
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-42 Score=281.17 Aligned_cols=228 Identities=25% Similarity=0.292 Sum_probs=198.6
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
+|+++||||++|||++++++|+++|++|++++|+.+ . ..+.++.+|++++++++++++++ +.+ +++
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-----------~~~~~~~~D~~~~~~~~~~~~~~-~~~-~~~ 67 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-----------EDLIYVEGDVTREEDVRRAVARA-QEE-APL 67 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-----------SSSEEEECCTTCHHHHHHHHHHH-HHH-SCE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-----------cceEEEeCCCCCHHHHHHHHHHH-Hhh-CCc
Confidence 689999999999999999999999999999999875 1 13578899999999999999999 777 799
Q ss_pred cEEEeCCCCCCCCCCCCC----CHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC---C---ceEEEEccccccccCCCCcc
Q 024752 93 NILINNAGTFIPKETTEF----TEEDFSTVMTTNFESAYHLSQLAHPLLKSAG---N---GNIIFISSVAGVIAIPMCSI 162 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~----~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~---~~iv~vsS~~~~~~~~~~~~ 162 (263)
|++|||||.....++.+. +.++|++.+++|+.++++++++++|.|.+++ . ++||++||..+..+.++...
T Consensus 68 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~ 147 (242)
T 1uay_A 68 FAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAA 147 (242)
T ss_dssp EEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHH
T ss_pred eEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCch
Confidence 999999998876655543 4559999999999999999999999998764 3 49999999999988888999
Q ss_pred hhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCC-CCCCChhhHHHHHHHHcC
Q 024752 163 YASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPM-LRPGEPNEVSSVVAFLCL 241 (263)
Q Consensus 163 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~s 241 (263)
|+++|++++.++++++.|++++||++++|+||+++|++...... . ....+....|. +++.+|+|++++++++++
T Consensus 148 Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~dva~~~~~l~~ 222 (242)
T 1uay_A 148 YAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPE--K---AKASLAAQVPFPPRLGRPEEYAALVLHILE 222 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCH--H---HHHHHHTTCCSSCSCCCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccch--h---HHHHHHhhCCCcccCCCHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999998754321 1 11333445677 888999999999999998
Q ss_pred CCCCCccCcEEEeCCCcccc
Q 024752 242 SATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 242 ~~~~~~~G~~i~~dgG~~~~ 261 (263)
+ ++++|+.|++|||++++
T Consensus 223 ~--~~~~G~~~~v~gG~~~~ 240 (242)
T 1uay_A 223 N--PMLNGEVVRLDGALRMA 240 (242)
T ss_dssp C--TTCCSCEEEESTTCCCC
T ss_pred C--CCCCCcEEEEcCCeecC
Confidence 7 78999999999999875
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-41 Score=279.46 Aligned_cols=224 Identities=22% Similarity=0.225 Sum_probs=192.6
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCC--CeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
|++|+++||||++|||++++++|+++| ++|++++|+.+..+++.+ + .+.++.++.+|++++++++++++++.+.+
T Consensus 1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~-~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (250)
T 1yo6_A 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS-I--KDSRVHVLPLTVTCDKSLDTFVSKVGEIV 77 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT-C--CCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh-c--cCCceEEEEeecCCHHHHHHHHHHHHHhc
Confidence 468999999999999999999999999 999999999887765432 1 35678999999999999999999999988
Q ss_pred CC--CccEEEeCCCCCC-CCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC------C-----CceEEEEcccccc
Q 024752 89 DG--KLNILINNAGTFI-PKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA------G-----NGNIIFISSVAGV 154 (263)
Q Consensus 89 ~~--~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~-----~~~iv~vsS~~~~ 154 (263)
+ ++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|+++ + .++||++||..+.
T Consensus 78 -g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~ 156 (250)
T 1yo6_A 78 -GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGS 156 (250)
T ss_dssp -GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGC
T ss_pred -CCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccc
Confidence 6 8999999999987 6777888999999999999999999999999999876 5 6899999999888
Q ss_pred ccC-------CCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCC
Q 024752 155 IAI-------PMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPG 227 (263)
Q Consensus 155 ~~~-------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (263)
.+. ++...|++||++++.++++++.|++++||++++|+||+++|++... ..+.
T Consensus 157 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--------------------~~~~ 216 (250)
T 1yo6_A 157 ITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK--------------------NAAL 216 (250)
T ss_dssp STTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------------------------
T ss_pred cCCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC--------------------CCCC
Confidence 775 5678899999999999999999999999999999999999998642 1235
Q ss_pred ChhhHHHHHHHHcCCCCCCccCcEEEeCCCc
Q 024752 228 EPNEVSSVVAFLCLSATSYVTGQVICVDGGY 258 (263)
Q Consensus 228 ~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~ 258 (263)
+|+|+++.+++++++...+++|+.+.+|||.
T Consensus 217 ~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~ 247 (250)
T 1yo6_A 217 TVEQSTAELISSFNKLDNSHNGRFFMRNLKP 247 (250)
T ss_dssp --HHHHHHHHHHHTTCCGGGTTCEEETTEEE
T ss_pred CHHHHHHHHHHHHhcccccCCCeEEEECCcC
Confidence 7999999999999988888999999999985
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-41 Score=288.55 Aligned_cols=245 Identities=18% Similarity=0.258 Sum_probs=191.3
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCC-----chhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHH
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN-----ETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMET 83 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 83 (263)
|++++|+++||||++|||++++++|+++|++|++++|+ .+.++++.+.+...+.++.++.+|+++++++++++++
T Consensus 1 M~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~ 80 (324)
T 3u9l_A 1 MVMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQ 80 (324)
T ss_dssp ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Confidence 56789999999999999999999999999999987765 4566666666666677899999999999999999999
Q ss_pred HHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc-CCCCcc
Q 024752 84 VSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA-IPMCSI 162 (263)
Q Consensus 84 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-~~~~~~ 162 (263)
+.+++ +++|+||||||+...+++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+..+ .++...
T Consensus 81 ~~~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~~~~ 159 (324)
T 3u9l_A 81 IIGED-GRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAP 159 (324)
T ss_dssp HHHHH-SCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSSCHH
T ss_pred HHHHc-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCcchh
Confidence 99998 8999999999998888888999999999999999999999999999999988899999999998854 466788
Q ss_pred hhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccc--cchh--------------HHHHHHhHhcCCCCCC
Q 024752 163 YASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEK--DSNF--------------LEHANRMVLRTPMLRP 226 (263)
Q Consensus 163 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~--------------~~~~~~~~~~~~~~~~ 226 (263)
|++||+++++++++++.|++++||+|++|+||++.|++...... .... .+........ .....
T Consensus 160 Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~ 238 (324)
T 3u9l_A 160 YFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAA-IVPPD 238 (324)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHHH-TSCTT
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHHH-hcCCC
Confidence 99999999999999999999999999999999999776422111 1100 0000011111 11223
Q ss_pred CChhhHHHHHHHHcCCCCCCccCcEEEeCC
Q 024752 227 GEPNEVSSVVAFLCLSATSYVTGQVICVDG 256 (263)
Q Consensus 227 ~~~~~va~~~~~l~s~~~~~~~G~~i~~dg 256 (263)
.+|++++++++.++..... .....+.++.
T Consensus 239 ~~p~~vA~aiv~~~~~~~~-~~~~~~~~gp 267 (324)
T 3u9l_A 239 ADVSLVADAIVRVVGTASG-KRPFRVHVDP 267 (324)
T ss_dssp CCTHHHHHHHHHHHTSCTT-CCCSEEEECT
T ss_pred CCHHHHHHHHHHHhcCCCC-CCCeEEEeCC
Confidence 6789999999988764421 2345666653
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-40 Score=277.87 Aligned_cols=231 Identities=22% Similarity=0.247 Sum_probs=200.8
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCC---CeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFG---AIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLME 82 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 82 (263)
.+..++++|++|||||++|||++++++|+++| ++|++++|+.+..+.+ +++...+.++.++.+|++++++++++++
T Consensus 14 ~~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~~~~~~~~~~Dl~~~~~v~~~~~ 92 (267)
T 1sny_A 14 LVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKNHSNIHILEIDLRNFDAYDKLVA 92 (267)
T ss_dssp ------CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHHCTTEEEEECCTTCGGGHHHHHH
T ss_pred ccccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhccCCceEEEEecCCChHHHHHHHH
Confidence 45567899999999999999999999999999 9999999998766543 4444446679999999999999999999
Q ss_pred HHHhhcCC--CccEEEeCCCCCC-CCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC------C-----CceEEEE
Q 024752 83 TVSSQFDG--KLNILINNAGTFI-PKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA------G-----NGNIIFI 148 (263)
Q Consensus 83 ~~~~~~~~--~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~-----~~~iv~v 148 (263)
++.+.+ + ++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|.++ + .++||++
T Consensus 93 ~~~~~~-g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~i 171 (267)
T 1sny_A 93 DIEGVT-KDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINM 171 (267)
T ss_dssp HHHHHH-GGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEE
T ss_pred HHHHhc-CCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEE
Confidence 999988 5 7999999999987 5677788999999999999999999999999999876 3 5899999
Q ss_pred ccccccccCC---CCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCC
Q 024752 149 SSVAGVIAIP---MCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLR 225 (263)
Q Consensus 149 sS~~~~~~~~---~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (263)
||..+..+.+ +...|+++|++++.|+++++.|++++||++++|+||+|+|++... ..
T Consensus 172 sS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--------------------~~ 231 (267)
T 1sny_A 172 SSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS--------------------SA 231 (267)
T ss_dssp CCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT--------------------TC
T ss_pred ecccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC--------------------CC
Confidence 9998877653 677899999999999999999999999999999999999998642 12
Q ss_pred CCChhhHHHHHHHHcCCCCCCccCcEEEeCCCc
Q 024752 226 PGEPNEVSSVVAFLCLSATSYVTGQVICVDGGY 258 (263)
Q Consensus 226 ~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~ 258 (263)
+.+|+++++.++++++.....++|+.+.+||+.
T Consensus 232 ~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~ 264 (267)
T 1sny_A 232 PLDVPTSTGQIVQTISKLGEKQNGGFVNYDGTP 264 (267)
T ss_dssp SBCHHHHHHHHHHHHHHCCGGGTTCEECTTSCB
T ss_pred CCCHHHHHHHHHHHHHhcCcCCCCcEEccCCcC
Confidence 357999999999999888888999999999986
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-40 Score=279.39 Aligned_cols=223 Identities=23% Similarity=0.325 Sum_probs=199.9
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
..+++++|+++||||++|||++++++|+++|++|++++|+++..+++.+++...+.++.++.+|++++++++++++++.+
T Consensus 25 ~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 104 (272)
T 1yb1_A 25 RRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKA 104 (272)
T ss_dssp CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999998888888877777899999999999999999999999
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhH
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASS 166 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s 166 (263)
.+ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.++...|+++
T Consensus 105 ~~-g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s 183 (272)
T 1yb1_A 105 EI-GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSS 183 (272)
T ss_dssp HT-CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHH
T ss_pred HC-CCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCchhHHHH
Confidence 98 79999999999987777778889999999999999999999999999998888999999999998887788899999
Q ss_pred HHHHHHHHHHHHHHHc---cCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 167 KVAMNQLTKNLACEWA---KDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
|++++.++++++.|+. +.||++++|+||+++|++... .. .+..++.+|+|+++.+++++...
T Consensus 184 K~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~-----~~----------~~~~~~~~~~dva~~i~~~~~~~ 248 (272)
T 1yb1_A 184 KFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN-----PS----------TSLGPTLEPEEVVNRLMHGILTE 248 (272)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC-----TH----------HHHCCCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc-----cc----------ccccCCCCHHHHHHHHHHHHHcC
Confidence 9999999999999997 679999999999999998532 10 12356788999999999988755
Q ss_pred CC
Q 024752 244 TS 245 (263)
Q Consensus 244 ~~ 245 (263)
..
T Consensus 249 ~~ 250 (272)
T 1yb1_A 249 QK 250 (272)
T ss_dssp CS
T ss_pred CC
Confidence 43
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-42 Score=284.61 Aligned_cols=220 Identities=28% Similarity=0.355 Sum_probs=175.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
|+++||||++|||++++++|+++|++|++++|+++..+. . +.+|++++++++++++++ + +++|
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~------------~-~~~Dl~~~~~v~~~~~~~---~-~~id 64 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA------------D-LSTAEGRKQAIADVLAKC---S-KGMD 64 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------------C-TTSHHHHHHHHHHHHTTC---T-TCCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc------------c-cccCCCCHHHHHHHHHHh---C-CCCC
Confidence 689999999999999999999999999999998764321 1 578999999998887643 2 6899
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccc-------------------
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGV------------------- 154 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~------------------- 154 (263)
+||||||+.... +.|++.+++|+.++++++++++|.|++++.++||++||..+.
T Consensus 65 ~lv~~Ag~~~~~-------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~ 137 (257)
T 1fjh_A 65 GLVLCAGLGPQT-------KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEA 137 (257)
T ss_dssp EEEECCCCCTTC-------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHH
T ss_pred EEEECCCCCCCc-------ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchh
Confidence 999999986421 228999999999999999999999998878999999999887
Q ss_pred ---------ccCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHh--cCCC
Q 024752 155 ---------IAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVL--RTPM 223 (263)
Q Consensus 155 ---------~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~ 223 (263)
.+.++...|++||++++.++++++.|++++||+|++|+||+++|++.......... ..... ..|.
T Consensus 138 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~----~~~~~~~~~~~ 213 (257)
T 1fjh_A 138 KARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRY----GESIAKFVPPM 213 (257)
T ss_dssp HHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-------------------------CCCST
T ss_pred hhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhH----HHHHHhccccc
Confidence 34446678999999999999999999999999999999999999987654111111 11111 4577
Q ss_pred CCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 224 LRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 224 ~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
+++.+|+|+|+++++|+++.+.+++|+.|.+|||+.++
T Consensus 214 ~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~~~~ 251 (257)
T 1fjh_A 214 GRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDAV 251 (257)
T ss_dssp TSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHH
T ss_pred CCCCCHHHHHHHHHHHhCchhcCCcCCEEEECCCcccc
Confidence 88999999999999999988889999999999998653
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-41 Score=280.41 Aligned_cols=226 Identities=27% Similarity=0.290 Sum_probs=162.3
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
|++++|++|||||++|||++++++|++ |++|++++|+++.+++..+ ...+.++.+|++++++ .+.+.+..+.+
T Consensus 1 m~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~-~~~~~~~~~~~ 73 (245)
T 3e9n_A 1 MSLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-----IEGVEPIESDIVKEVL-EEGGVDKLKNL 73 (245)
T ss_dssp -----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-----STTEEEEECCHHHHHH-TSSSCGGGTTC
T ss_pred CCCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-----hcCCcceecccchHHH-HHHHHHHHHhc
Confidence 578899999999999999999999998 9999999999887766543 2358889999998877 44445555566
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+++|++|||||+....++.+.+.++|++.+++|+.++++++++++|.|++++ |+||++||..+..+.++...|++||+
T Consensus 74 -~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~ 151 (245)
T 3e9n_A 74 -DHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPGNTIYAASKH 151 (245)
T ss_dssp -SCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------CHHHHHHHH
T ss_pred -CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCCchHHHHHHH
Confidence 7899999999998888888889999999999999999999999999998765 89999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCcc
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~ 248 (263)
+++.|+++++.|++++||+|++|+||+++|++........ ....+..++.+|+|+|+++++|++....
T Consensus 152 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~---------~~~~~~~~~~~p~dvA~~i~~l~~~~~~--- 219 (245)
T 3e9n_A 152 ALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQ---------GTNFRPEIYIEPKEIANAIRFVIDAGET--- 219 (245)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECCC-------------------------CCGGGSCHHHHHHHHHHHHTSCTT---
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhhh---------hcccccccCCCHHHHHHHHHHHHcCCCc---
Confidence 9999999999999999999999999999999876543221 1123556678999999999999986653
Q ss_pred CcEEEeC
Q 024752 249 GQVICVD 255 (263)
Q Consensus 249 G~~i~~d 255 (263)
++.+++|
T Consensus 220 ~~~~~i~ 226 (245)
T 3e9n_A 220 TQITNVD 226 (245)
T ss_dssp EEEEEEE
T ss_pred cceeeeE
Confidence 5555543
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-41 Score=286.86 Aligned_cols=238 Identities=19% Similarity=0.280 Sum_probs=188.5
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHh------cCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS------KGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
++|+++||||++|||++++++|+++|++|++++|+....++..+.+.. .+.++.++.+|++++++++++++++.
T Consensus 1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 80 (327)
T 1jtv_A 1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT 80 (327)
T ss_dssp CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence 479999999999999999999999999998888776554433333322 23578999999999999999999873
Q ss_pred hhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhh
Q 024752 86 SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYAS 165 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~ 165 (263)
+ +++|+||||||+....++.+.+.++|++.|++|+.++++++++++|.|++++.++||++||..+..+.++...|++
T Consensus 81 --~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~Y~a 157 (327)
T 1jtv_A 81 --E-GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCA 157 (327)
T ss_dssp --T-SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHH
T ss_pred --c-CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChHHHH
Confidence 3 7899999999998777788889999999999999999999999999999877899999999999999889999999
Q ss_pred HHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccc---------hhHHHHHHhHh--cCCCCCC-CChhhHH
Q 024752 166 SKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDS---------NFLEHANRMVL--RTPMLRP-GEPNEVS 233 (263)
Q Consensus 166 sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~---------~~~~~~~~~~~--~~~~~~~-~~~~~va 233 (263)
||++++.|+++++.|++++||+|++|+||+|+|++........ ........+.. ..+.++. .+|+|+|
T Consensus 158 SK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA 237 (327)
T 1jtv_A 158 SKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVA 237 (327)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhhhcCCCHHHHH
Confidence 9999999999999999999999999999999999975532211 00000000100 0122233 4899999
Q ss_pred HHHHHHcCC---CCCCccCcEE
Q 024752 234 SVVAFLCLS---ATSYVTGQVI 252 (263)
Q Consensus 234 ~~~~~l~s~---~~~~~~G~~i 252 (263)
+.++++++. ..+|++|+.+
T Consensus 238 ~~i~~l~~~~~~~~~~~tg~~~ 259 (327)
T 1jtv_A 238 EVFLTALRAPKPTLRYFTTERF 259 (327)
T ss_dssp HHHHHHHHCSSCCSEEESCSTT
T ss_pred HHHHHHHcCCCCCeEEEeCchH
Confidence 999999874 3567888754
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-39 Score=269.57 Aligned_cols=222 Identities=27% Similarity=0.356 Sum_probs=193.0
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHH-CCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAA-FGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
.++|++|||||++|||++++++|++ +|++|++++|+.+..++..+++...+.++.++.+|+++.++++++++++.+.+
T Consensus 2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~- 80 (276)
T 1wma_A 2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY- 80 (276)
T ss_dssp CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhc-
Confidence 4689999999999999999999999 99999999999998888888887767778999999999999999999999998
Q ss_pred CCccEEEeCCCCCCCCCCCCCC-HHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC-----------
Q 024752 90 GKLNILINNAGTFIPKETTEFT-EEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI----------- 157 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~----------- 157 (263)
+++|+||||||....... +.+ .+++++.+++|+.++++++++++|.|++ .++||++||..+..+.
T Consensus 81 g~id~li~~Ag~~~~~~~-~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~~~~~~~ 157 (276)
T 1wma_A 81 GGLDVLVNNAGIAFKVAD-PTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQQKF 157 (276)
T ss_dssp SSEEEEEECCCCCCCTTC-CSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHHHHHH
T ss_pred CCCCEEEECCcccccCCC-ccccHHHHHhhhheeeeeHHHHHHHHHHhhCC--CCEEEEECChhhhcccccCChhHHhhc
Confidence 799999999998765432 334 5899999999999999999999999876 4899999998776320
Q ss_pred ------------------------------CCCcchhhHHHHHHHHHHHHHHHHcc----CCcEEEEEecCcccCCcccc
Q 024752 158 ------------------------------PMCSIYASSKVAMNQLTKNLACEWAK----DKIRVNTVAPWVIRTPLLDT 203 (263)
Q Consensus 158 ------------------------------~~~~~Y~~sK~a~~~~~~~~a~e~~~----~gi~v~~v~PG~v~t~~~~~ 203 (263)
.+...|++||++++.++++++.++++ .||+|++|+||+|+|++...
T Consensus 158 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~ 237 (276)
T 1wma_A 158 RSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP 237 (276)
T ss_dssp HCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT
T ss_pred cccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc
Confidence 12378999999999999999999987 79999999999999998642
Q ss_pred ccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC--CCCccCcEEEeCCC
Q 024752 204 VEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA--TSYVTGQVICVDGG 257 (263)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~--~~~~~G~~i~~dgG 257 (263)
..+.+|+|+++.+++|++.. ..+++|+.|. +++
T Consensus 238 --------------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~-~~~ 272 (276)
T 1wma_A 238 --------------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS-EKR 272 (276)
T ss_dssp --------------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TTE
T ss_pred --------------------cccCChhHhhhhHhhhhcCcccccccCceEec-cCc
Confidence 13468999999999999844 4689999998 544
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-39 Score=275.61 Aligned_cols=222 Identities=26% Similarity=0.339 Sum_probs=188.6
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcC-CceEEEeccCCCH-HHHHHHHHHHH
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG-LQVSGSVCDLKIR-AQREKLMETVS 85 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~-~~~~~~~~~~~ 85 (263)
...+++|++|||||++|||+++|++|+++|++|++++|+.++.++..+++.+.+ .++.++.+|++++ ++++++++.+.
T Consensus 7 ~~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~ 86 (311)
T 3o26_A 7 NTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIK 86 (311)
T ss_dssp -----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHH
Confidence 345789999999999999999999999999999999999999999999987654 4799999999998 99999999999
Q ss_pred hhcCCCccEEEeCCCCCCC------------------------------CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhH
Q 024752 86 SQFDGKLNILINNAGTFIP------------------------------KETTEFTEEDFSTVMTTNFESAYHLSQLAHP 135 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~------------------------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 135 (263)
+++ +++|+||||||+... .++.+.+.++|++.|++|+.|+++++++++|
T Consensus 87 ~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 165 (311)
T 3o26_A 87 THF-GKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIP 165 (311)
T ss_dssp HHH-SSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HhC-CCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhH
Confidence 998 899999999998743 1345678999999999999999999999999
Q ss_pred HHhhCCCceEEEEccccccccC-------------------------------------------CCCcchhhHHHHHHH
Q 024752 136 LLKSAGNGNIIFISSVAGVIAI-------------------------------------------PMCSIYASSKVAMNQ 172 (263)
Q Consensus 136 ~~~~~~~~~iv~vsS~~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~ 172 (263)
.|++++.++||++||..+..+. ++...|++||++++.
T Consensus 166 ~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~ 245 (311)
T 3o26_A 166 LLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNA 245 (311)
T ss_dssp HHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHH
T ss_pred hhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHH
Confidence 9998888999999999887653 345789999999999
Q ss_pred HHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCcEE
Q 024752 173 LTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVI 252 (263)
Q Consensus 173 ~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i 252 (263)
|+++++.|+.+ |+||+|+||+|+|++..... ..++++.++.++.++.......+|..+
T Consensus 246 ~~~~la~e~~~--i~v~~v~PG~v~T~~~~~~~--------------------~~~~~~~a~~~~~~~~~~~~~~~g~~~ 303 (311)
T 3o26_A 246 YTRVLANKIPK--FQVNCVCPGLVKTEMNYGIG--------------------NYTAEEGAEHVVRIALFPDDGPSGFFY 303 (311)
T ss_dssp HHHHHHHHCTT--SEEEEECCCSBCSGGGTTCC--------------------SBCHHHHHHHHHHHHTCCSSCCCSCEE
T ss_pred HHHHHHhhcCC--ceEEEecCCceecCCcCCCC--------------------CCCHHHHHHHHHHHHhCCCCCCCceEe
Confidence 99999999964 99999999999999865432 136899999998887654444455544
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-40 Score=288.65 Aligned_cols=242 Identities=11% Similarity=0.037 Sum_probs=201.8
Q ss_pred CCCCEEEEecCCCchHHH--HHHHHHHCCCeEEEeeCCchh------------HHHHHHHHHhcCCceEEEeccCCCHHH
Q 024752 11 LKGMTALVTGGTKGIGYA--VVEELAAFGAIVHTCSRNETE------------LNQRIQEWKSKGLQVSGSVCDLKIRAQ 76 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~--~a~~l~~~g~~V~~~~r~~~~------------~~~~~~~~~~~~~~~~~~~~D~~~~~~ 76 (263)
..+|++|||||++|||++ +++.|+++|++|++++|+... .+.+.+.+...+.++..+.+|++++++
T Consensus 58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~ 137 (418)
T 4eue_A 58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET 137 (418)
T ss_dssp CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence 679999999999999999 999999999999999997643 244444555667789999999999999
Q ss_pred HHHHHHHHHhhcCCCccEEEeCCCCC-------------CCCCC---------------------CCCCHHHHHHHHHhh
Q 024752 77 REKLMETVSSQFDGKLNILINNAGTF-------------IPKET---------------------TEFTEEDFSTVMTTN 122 (263)
Q Consensus 77 ~~~~~~~~~~~~~~~id~li~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n 122 (263)
++++++++.+.+ +++|+||||||.. ...++ .+.+.++|++.+++|
T Consensus 138 v~~~v~~i~~~~-G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn 216 (418)
T 4eue_A 138 KDKVIKYIKDEF-GKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVM 216 (418)
T ss_dssp HHHHHHHHHHTT-CCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc-CCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHh
Confidence 999999999998 8999999999985 22333 356899999999999
Q ss_pred hHhHH-HHHHHHhHHHhhCCCceEEEEccccccccCCCC--cchhhHHHHHHHHHHHHHHHHcc-CCcEEEEEecCcccC
Q 024752 123 FESAY-HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMC--SIYASSKVAMNQLTKNLACEWAK-DKIRVNTVAPWVIRT 198 (263)
Q Consensus 123 ~~~~~-~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~--~~Y~~sK~a~~~~~~~~a~e~~~-~gi~v~~v~PG~v~t 198 (263)
..+.+ .+++++++.+..+++|+||++||..+..+.|.+ ..|++||+|+++|+++++.|+++ +|||||+|+||+|.|
T Consensus 217 ~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T 296 (418)
T 4eue_A 217 GGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVT 296 (418)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCC
T ss_pred hHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcC
Confidence 99888 778887765544456899999999999998888 99999999999999999999999 999999999999999
Q ss_pred CccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCccc
Q 024752 199 PLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
++....+..+... ... ..++++.+.+|++++.+.+|+++ ...+|+.|.+|+|..+
T Consensus 297 ~~s~~ip~~p~y~---~~~--~~~mk~~G~~E~v~e~~~~L~sd--~~~~g~~~~~D~~~~~ 351 (418)
T 4eue_A 297 KASAYIPTFPLYA---AIL--YKVMKEKNIHENCIMQIERMFSE--KIYSNEKIQFDDKGRL 351 (418)
T ss_dssp HHHHTSTTHHHHH---HHH--HHHHHHTTCCCCHHHHHHHHHHH--TTSSSSCCCCCTTSCE
T ss_pred hhhhcCCCCcHHH---HHH--HHHHhhcCChHHHHHHHHHHhhc--cccCCCccccCCCcee
Confidence 9877654322111 111 11456678899999999999987 4568999999997654
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-38 Score=263.68 Aligned_cols=220 Identities=23% Similarity=0.272 Sum_probs=189.6
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCC-ceEEEeccCCCHHHHHHHHHHHHh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL-QVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
+.++++|+++||||++|||++++++|+++|++|++++|+++.+++..+++.+.+. ++.++.+|++++++++++++++.+
T Consensus 23 ~~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 102 (286)
T 1xu9_A 23 PEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGK 102 (286)
T ss_dssp GGGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred hhhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHH
Confidence 3458899999999999999999999999999999999999999888888766554 688999999999999999999999
Q ss_pred hcCCCccEEEeC-CCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhh
Q 024752 87 QFDGKLNILINN-AGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYAS 165 (263)
Q Consensus 87 ~~~~~id~li~~-ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~ 165 (263)
.+ +++|++||| ||... .++.+.+.+++++.+++|+.|+++++++++|.|+++ .|+||++||..+..+.++...|++
T Consensus 103 ~~-g~iD~li~naag~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~a 179 (286)
T 1xu9_A 103 LM-GGLDMLILNHITNTS-LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSA 179 (286)
T ss_dssp HH-TSCSEEEECCCCCCC-CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTTCHHHHH
T ss_pred Hc-CCCCEEEECCccCCC-CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CCEEEEECCcccccCCCCccHHHH
Confidence 88 799999999 56543 345567899999999999999999999999999765 589999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH--ccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 166 SKVAMNQLTKNLACEW--AKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 166 sK~a~~~~~~~~a~e~--~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
||++++.++++++.|+ ...||++++|+||+++|++........ ......+|+|+|+.++..+...
T Consensus 180 sK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~-------------~~~~~~~~~~vA~~i~~~~~~~ 246 (286)
T 1xu9_A 180 SKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGI-------------VHMQAAPKEECALEIIKGGALR 246 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCGG-------------GGGGCBCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhcccc-------------ccCCCCCHHHHHHHHHHHHhcC
Confidence 9999999999999999 578999999999999999864321110 0112457999999998776543
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-38 Score=308.67 Aligned_cols=243 Identities=20% Similarity=0.193 Sum_probs=204.5
Q ss_pred cccCCCCCCEEEEecCCCc-hHHHHHHHHHHCCCeEEEe-eCCchhHHHHHHHHHh----cCCceEEEeccCCCHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKG-IGYAVVEELAAFGAIVHTC-SRNETELNQRIQEWKS----KGLQVSGSVCDLKIRAQREK 79 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~g-iG~~~a~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~ 79 (263)
...++++||++|||||++| ||+++|++|+++|++|+++ +|+.+.+++..+++.+ .+.++.++.+|+++++++++
T Consensus 668 ~~~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~a 747 (1887)
T 2uv8_A 668 FNGVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEA 747 (1887)
T ss_dssp HTCBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHH
T ss_pred cccCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHH
Confidence 3456799999999999998 9999999999999999998 6888888777766632 25678999999999999999
Q ss_pred HHHHHHhh-----cCC-CccEEEeCCCCCCCC-CCCCCC--HHHHHHHHHhhhHhHHHHHHHH--hHHHhhCCCceEEEE
Q 024752 80 LMETVSSQ-----FDG-KLNILINNAGTFIPK-ETTEFT--EEDFSTVMTTNFESAYHLSQLA--HPLLKSAGNGNIIFI 148 (263)
Q Consensus 80 ~~~~~~~~-----~~~-~id~li~~ag~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~~~~~~--~~~~~~~~~~~iv~v 148 (263)
+++++.++ + + ++|+||||||+.... ++.+.+ .++|++.|++|+.+++.+++++ +|.|.+++.|+||++
T Consensus 748 lv~~i~~~~~~~G~-G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnI 826 (1887)
T 2uv8_A 748 LIEFIYDTEKNGGL-GWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPM 826 (1887)
T ss_dssp HHHHHHSCTTTTSC-CCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEE
T ss_pred HHHHHHHhcccccc-CCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEE
Confidence 99999988 5 5 899999999998777 788888 8999999999999999999998 788888777899999
Q ss_pred ccccccccCCCCcchhhHHHHHHHH-HHHHHHHHccCCcEEEEEecCccc-CCccccccccchhHHHHHHhHhcCCCCCC
Q 024752 149 SSVAGVIAIPMCSIYASSKVAMNQL-TKNLACEWAKDKIRVNTVAPWVIR-TPLLDTVEKDSNFLEHANRMVLRTPMLRP 226 (263)
Q Consensus 149 sS~~~~~~~~~~~~Y~~sK~a~~~~-~~~~a~e~~~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (263)
||..+..+ +...|++||+++++| ++.++.++++. |+||+|+||+++ |+|.... ... .......|. +.
T Consensus 827 SS~ag~~g--g~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~~~---~~~----~~~~~~~pl-r~ 895 (1887)
T 2uv8_A 827 SPNHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSAN---NII----AEGIEKMGV-RT 895 (1887)
T ss_dssp CSCTTCSS--CBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC-----C---CTT----HHHHHTTSC-CC
T ss_pred cChHhccC--CCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEecccccccccccc---hhH----HHHHHhcCC-CC
Confidence 99998877 678899999999999 99999999887 999999999999 7876531 111 111223444 55
Q ss_pred CChhhHHHHHHHHcCCC-CCCccCcEEEeC--CCccc
Q 024752 227 GEPNEVSSVVAFLCLSA-TSYVTGQVICVD--GGYSV 260 (263)
Q Consensus 227 ~~~~~va~~~~~l~s~~-~~~~~G~~i~~d--gG~~~ 260 (263)
.+|+|+|+.++||+++. ..++||+.|.+| ||+..
T Consensus 896 ~sPEEVA~avlfLaSd~~as~iTGq~I~VDVDGG~~~ 932 (1887)
T 2uv8_A 896 FSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQF 932 (1887)
T ss_dssp EEHHHHHHHHHGGGSHHHHHHHHHSCEEEEESCSTTT
T ss_pred CCHHHHHHHHHHHhCCCccccccCcEEEEECCCCeec
Confidence 68999999999999987 789999999875 99764
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=306.27 Aligned_cols=244 Identities=20% Similarity=0.192 Sum_probs=206.6
Q ss_pred ccccCCCCCCEEEEecCCCc-hHHHHHHHHHHCCCeEEEe-eCCchhHHHHHHHHHh----cCCceEEEeccCCCHHHHH
Q 024752 5 REQRWSLKGMTALVTGGTKG-IGYAVVEELAAFGAIVHTC-SRNETELNQRIQEWKS----KGLQVSGSVCDLKIRAQRE 78 (263)
Q Consensus 5 ~~~~~~~~~k~vlVtGas~g-iG~~~a~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~ 78 (263)
....++++||++|||||++| ||+++|++|+++|++|+++ +|+.+.+++..+++.+ .+.++.++.+|++++++++
T Consensus 468 a~~~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVe 547 (1688)
T 2pff_A 468 XXXXVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVE 547 (1688)
T ss_dssp SSSCCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHH
T ss_pred cccccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHH
Confidence 45677899999999999998 9999999999999999998 6887777767666632 2567899999999999999
Q ss_pred HHHHHHHhh-----cCC-CccEEEeCCCCCCCC-CCCCCC--HHHHHHHHHhhhHhHHHHHHHH--hHHHhhCCCceEEE
Q 024752 79 KLMETVSSQ-----FDG-KLNILINNAGTFIPK-ETTEFT--EEDFSTVMTTNFESAYHLSQLA--HPLLKSAGNGNIIF 147 (263)
Q Consensus 79 ~~~~~~~~~-----~~~-~id~li~~ag~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~~~~~~--~~~~~~~~~~~iv~ 147 (263)
++++++.+. + + ++|+||||||+.... ++.+.+ .++|++.|++|+.+++.+++++ +|.|++++.|+||+
T Consensus 548 aLVe~I~e~~~~~Gf-G~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVn 626 (1688)
T 2pff_A 548 ALIEFIYDTEKNGGL-GWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILP 626 (1688)
T ss_dssp HHHHHHHSCTTSSSC-CCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCC
T ss_pred HHHHHHHHhcccccc-CCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEE
Confidence 999999988 6 5 899999999998777 788888 9999999999999999999999 88888877789999
Q ss_pred EccccccccCCCCcchhhHHHHHHHH-HHHHHHHHccCCcEEEEEecCccc-CCccccccccchhHHHHHHhHhcCCCCC
Q 024752 148 ISSVAGVIAIPMCSIYASSKVAMNQL-TKNLACEWAKDKIRVNTVAPWVIR-TPLLDTVEKDSNFLEHANRMVLRTPMLR 225 (263)
Q Consensus 148 vsS~~~~~~~~~~~~Y~~sK~a~~~~-~~~~a~e~~~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (263)
+||..+..+ +...|++||+|+++| .+.++.++++. |+||+|+||+++ |++....... .......|. +
T Consensus 627 ISSiAG~~G--g~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V~TT~M~~~~e~~-------~~~l~~ipl-R 695 (1688)
T 2pff_A 627 MSPNHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSANNII-------AEGIEKMGV-R 695 (1688)
T ss_dssp CCSCTTTSS--CBTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCCCCCSSSCTTTTC-------STTTSSSSC-C
T ss_pred EEChHhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcCcCCcccCCchHH-------HHHHHhCCC-C
Confidence 999988876 678899999999999 78888888887 999999999999 7876431100 111122344 4
Q ss_pred CCChhhHHHHHHHHcCCC-CCCccCcEEEeC--CCccc
Q 024752 226 PGEPNEVSSVVAFLCLSA-TSYVTGQVICVD--GGYSV 260 (263)
Q Consensus 226 ~~~~~~va~~~~~l~s~~-~~~~~G~~i~~d--gG~~~ 260 (263)
..+|+|+|++++||+++. +.+++|+.|.+| ||+..
T Consensus 696 ~~sPEEVA~aIlFLaSd~sAs~ITGq~I~VDVDGG~~~ 733 (1688)
T 2pff_A 696 TFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQF 733 (1688)
T ss_dssp CCCCCTTHHHHHHHTSTTHHHHHTTSCCCCCCSCSGGG
T ss_pred CCCHHHHHHHHHHHhCCCccccccCcEEEEEcCCCeee
Confidence 568999999999999988 688999999876 99764
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-37 Score=301.32 Aligned_cols=243 Identities=19% Similarity=0.207 Sum_probs=204.0
Q ss_pred cccCCCCCCEEEEecCCCc-hHHHHHHHHHHCCCeEEEee-CCchhHHHHHHHHHh----cCCceEEEeccCCCHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKG-IGYAVVEELAAFGAIVHTCS-RNETELNQRIQEWKS----KGLQVSGSVCDLKIRAQREK 79 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~g-iG~~~a~~l~~~g~~V~~~~-r~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~ 79 (263)
...|+++||++|||||++| ||+++|++|+++|++|++++ |+.+.+++..+++.. .+.++.++.||+++++++.+
T Consensus 645 ~~~m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~a 724 (1878)
T 2uv9_A 645 RSGLTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEA 724 (1878)
T ss_dssp HHCBCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHH
T ss_pred ccCCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHH
Confidence 3557899999999999999 99999999999999999984 777777666655532 36679999999999999999
Q ss_pred HHHHHHhh---cCC-CccEEEeCCCCCCCC-CCCCCC--HHHHHHHHHhhhHhHHHHHHH--HhHHHhhCCCceEEEEcc
Q 024752 80 LMETVSSQ---FDG-KLNILINNAGTFIPK-ETTEFT--EEDFSTVMTTNFESAYHLSQL--AHPLLKSAGNGNIIFISS 150 (263)
Q Consensus 80 ~~~~~~~~---~~~-~id~li~~ag~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~~~~~--~~~~~~~~~~~~iv~vsS 150 (263)
+++++.+. + + ++|+||||||+.... ++.+.+ .++|++.|++|+.+++++++. ++|.|.+++.|+||++||
T Consensus 725 lv~~i~~~~~~~-G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS 803 (1878)
T 2uv9_A 725 LVNYIYDTKNGL-GWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSP 803 (1878)
T ss_dssp HHHHHHCSSSSC-CCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECS
T ss_pred HHHHHHHhhccc-CCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcc
Confidence 99999988 7 6 899999999998776 888888 899999999999999999987 778887776789999999
Q ss_pred ccccccCCCCcchhhHHHHHHHHHHHHHHH-HccCCcEEEEEecCccc-CCccccccccchhHHHHHHhHhcCCCCCCCC
Q 024752 151 VAGVIAIPMCSIYASSKVAMNQLTKNLACE-WAKDKIRVNTVAPWVIR-TPLLDTVEKDSNFLEHANRMVLRTPMLRPGE 228 (263)
Q Consensus 151 ~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e-~~~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (263)
..+..+ +...|++||+++++|++.++.+ +++. |+||+|+||+++ |+|.... ... .......+. +..+
T Consensus 804 ~ag~~g--g~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V~gT~m~~~~---~~~----~~~~~~~pl-r~~s 872 (1878)
T 2uv9_A 804 NHGTFG--NDGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWTRGTGLMSAN---NLV----AEGVEKLGV-RTFS 872 (1878)
T ss_dssp CSSSSS--CCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCBCCTTSCSHH---HHT----HHHHHTTTC-CCBC
T ss_pred hhhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEecceecCcccccc---hhh----HHHHHhcCC-CCCC
Confidence 998877 4678999999999999876654 7776 999999999999 9986541 111 122223444 4568
Q ss_pred hhhHHHHHHHHcCCCC-CCccCcEEEe--CCCccc
Q 024752 229 PNEVSSVVAFLCLSAT-SYVTGQVICV--DGGYSV 260 (263)
Q Consensus 229 ~~~va~~~~~l~s~~~-~~~~G~~i~~--dgG~~~ 260 (263)
|+|++++++||+++.. .++||+.|.+ |||+..
T Consensus 873 PeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~ 907 (1878)
T 2uv9_A 873 QQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQF 907 (1878)
T ss_dssp HHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGG
T ss_pred HHHHHHHHHHHhCCcccccccCcEEEEEcCCCccc
Confidence 9999999999999887 8999999887 599764
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-36 Score=241.98 Aligned_cols=200 Identities=22% Similarity=0.222 Sum_probs=176.6
Q ss_pred CC-EEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 13 GM-TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 13 ~k-~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
+| +++||||+||||++++++|+ +|++|++++|+++ .+.+|++++++++++++++ ++
T Consensus 2 ~kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~-----~~ 58 (202)
T 3d7l_A 2 NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------------DVTVDITNIDSIKKMYEQV-----GK 58 (202)
T ss_dssp CSCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------------SEECCTTCHHHHHHHHHHH-----CC
T ss_pred CCcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------------ceeeecCCHHHHHHHHHHh-----CC
Confidence 44 79999999999999999999 9999999999874 3679999999999988765 68
Q ss_pred ccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHH
Q 024752 92 LNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMN 171 (263)
Q Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~ 171 (263)
+|++|||||.....++.+.+.++|++.+++|+.+++++++++.|.|++ +++||++||..+..+.++...|+++|++++
T Consensus 59 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~ 136 (202)
T 3d7l_A 59 VDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND--KGSFTLTTGIMMEDPIVQGASAAMANGAVT 136 (202)
T ss_dssp EEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE--EEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc--CCEEEEEcchhhcCCCCccHHHHHHHHHHH
Confidence 999999999887777788899999999999999999999999999865 489999999999888888999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCcE
Q 024752 172 QLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQV 251 (263)
Q Consensus 172 ~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~ 251 (263)
.++++++.|+ ++||+++.|+||+++|++... ....+...+.+++|+|+++++++. .+++|+.
T Consensus 137 ~~~~~~~~e~-~~gi~v~~v~pg~v~~~~~~~--------------~~~~~~~~~~~~~dva~~~~~~~~---~~~~G~~ 198 (202)
T 3d7l_A 137 AFAKSAAIEM-PRGIRINTVSPNVLEESWDKL--------------EPFFEGFLPVPAAKVARAFEKSVF---GAQTGES 198 (202)
T ss_dssp HHHHHHTTSC-STTCEEEEEEECCBGGGHHHH--------------GGGSTTCCCBCHHHHHHHHHHHHH---SCCCSCE
T ss_pred HHHHHHHHHc-cCCeEEEEEecCccCCchhhh--------------hhhccccCCCCHHHHHHHHHHhhh---ccccCce
Confidence 9999999999 789999999999999986421 112355677899999999888773 4678999
Q ss_pred EEeC
Q 024752 252 ICVD 255 (263)
Q Consensus 252 i~~d 255 (263)
+++|
T Consensus 199 ~~vd 202 (202)
T 3d7l_A 199 YQVY 202 (202)
T ss_dssp EEEC
T ss_pred EecC
Confidence 9987
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-37 Score=252.71 Aligned_cols=220 Identities=26% Similarity=0.366 Sum_probs=183.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
|++|||||+||||++++++|+++|++|++++|+++..+. .+.+|++++++++++++++ . +++|
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------------~~~~D~~~~~~~~~~~~~~---~-~~~d 64 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-------------DLSTPGGRETAVAAVLDRC---G-GVLD 64 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------------CTTSHHHHHHHHHHHHHHH---T-TCCS
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-------------cccCCcccHHHHHHHHHHc---C-CCcc
Confidence 689999999999999999999999999999998764321 1578999999999888755 2 6899
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC----------------
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI---------------- 157 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~---------------- 157 (263)
+||||||.... .+.+++.+++|+.+++++++++++.|++.+.++||++||..+..+.
T Consensus 65 ~vi~~Ag~~~~-------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~ 137 (255)
T 2dkn_A 65 GLVCCAGVGVT-------AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEA 137 (255)
T ss_dssp EEEECCCCCTT-------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHH
T ss_pred EEEECCCCCCc-------chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchh
Confidence 99999997642 1237899999999999999999999998777999999999887654
Q ss_pred ----------CCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcC--CCCC
Q 024752 158 ----------PMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRT--PMLR 225 (263)
Q Consensus 158 ----------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 225 (263)
++...|+.+|++++.+++.++.++.++||++++++||+++|++.......... ....... |.++
T Consensus 138 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 213 (255)
T 2dkn_A 138 RAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRY----GESTRRFVAPLGR 213 (255)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTT----HHHHHSCCCTTSS
T ss_pred hhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhh----HHHHHHHHHHhcC
Confidence 45678999999999999999999998999999999999999987654221111 1111222 6778
Q ss_pred CCChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 226 PGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 226 ~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
+.+++|+++++++++++...+++|+.+++|||..++
T Consensus 214 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~ 249 (255)
T 2dkn_A 214 GSEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDAL 249 (255)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHH
T ss_pred CCCHHHHHHHHHHHhCCCcccceeeEEEecCCeEee
Confidence 899999999999999887778999999999998764
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-35 Score=235.44 Aligned_cols=201 Identities=18% Similarity=0.218 Sum_probs=173.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
|+++||||++|||++++++|+++ +|++++|+++..++..+++.. .++.+|+++++++.+++++ + +++|
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~D~~~~~~~~~~~~~----~-~~id 68 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-----RALPADLADELEAKALLEE----A-GPLD 68 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-----EECCCCTTSHHHHHHHHHH----H-CSEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-----cEEEeeCCCHHHHHHHHHh----c-CCCC
Confidence 68999999999999999999998 999999999888777666531 7889999999999999887 4 7899
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHHHH
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQL 173 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~ 173 (263)
++|||||.....++.+.+.++|++.+++|+.+++++++++ ++++.++||++||..+..+.++...|+++|++++.+
T Consensus 69 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~ 144 (207)
T 2yut_A 69 LLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAY 144 (207)
T ss_dssp EEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEEEEEEEEECCCHHHHSSTTBHHHHHHHHHHHHH
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcCCcEEEEEcChhhccCCCCcchHHHHHHHHHHH
Confidence 9999999987777888899999999999999999999998 344568999999999988888899999999999999
Q ss_pred HHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCC
Q 024752 174 TKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245 (263)
Q Consensus 174 ~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~ 245 (263)
+++++.|++++||++++++||+++|++.... ..+..++.+|+|+++++++++.....
T Consensus 145 ~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~~---------------~~~~~~~~~~~dva~~~~~~~~~~~~ 201 (207)
T 2yut_A 145 LEAARKELLREGVHLVLVRLPAVATGLWAPL---------------GGPPKGALSPEEAARKVLEGLFREPV 201 (207)
T ss_dssp HHHHHHHHHTTTCEEEEECCCCBCSGGGGGG---------------TSCCTTCBCHHHHHHHHHHHHC--CC
T ss_pred HHHHHHHHhhhCCEEEEEecCcccCCCcccc---------------CCCCCCCCCHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999874321 13557788999999999999976544
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-34 Score=257.29 Aligned_cols=219 Identities=20% Similarity=0.174 Sum_probs=184.2
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCe-EEEe-eCCc-------------hhHHHHHHHHHhcCCceEEEeccCCCHHH
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAI-VHTC-SRNE-------------TELNQRIQEWKSKGLQVSGSVCDLKIRAQ 76 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~-V~~~-~r~~-------------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 76 (263)
++|++|||||++|||++++++|+++|++ |+++ +|+. +.++++.+++...+.++.++.||++|+++
T Consensus 250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~ 329 (525)
T 3qp9_A 250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA 329 (525)
T ss_dssp TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence 5899999999999999999999999997 7777 8983 55667788888888899999999999999
Q ss_pred HHHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccccc
Q 024752 77 REKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVI 155 (263)
Q Consensus 77 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~ 155 (263)
+.++++++. ++ +++|+||||||+....++.+.+.++|++.|++|+.|++++.+++.+.|++++ .++||++||.++..
T Consensus 330 v~~~~~~i~-~~-g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~ 407 (525)
T 3qp9_A 330 AARLLAGVS-DA-HPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIW 407 (525)
T ss_dssp HHHHHHTSC-TT-SCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTT
T ss_pred HHHHHHHHH-hc-CCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcC
Confidence 999999998 66 7999999999999888899999999999999999999999999999998776 68999999999999
Q ss_pred cCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHH
Q 024752 156 AIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSV 235 (263)
Q Consensus 156 ~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~ 235 (263)
+.++...|+++|+++++|+ .++.++||++++|+||+++|+|..... .. ..+.. ......+|++++++
T Consensus 408 g~~g~~~YaaaKa~l~~lA----~~~~~~gi~v~sI~pG~~~tgm~~~~~----~~---~~~~~--~g~~~l~pee~a~~ 474 (525)
T 3qp9_A 408 GGAGQGAYAAGTAFLDALA----GQHRADGPTVTSVAWSPWEGSRVTEGA----TG---ERLRR--LGLRPLAPATALTA 474 (525)
T ss_dssp CCTTCHHHHHHHHHHHHHH----TSCCSSCCEEEEEEECCBTTSGGGSSH----HH---HHHHH--TTBCCBCHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHH----HHHHhCCCCEEEEECCccccccccchh----hH---HHHHh--cCCCCCCHHHHHHH
Confidence 9999999999999999885 466778999999999999999874311 11 11111 12245689999999
Q ss_pred HHHHcCCCCC
Q 024752 236 VAFLCLSATS 245 (263)
Q Consensus 236 ~~~l~s~~~~ 245 (263)
+.++++....
T Consensus 475 l~~~l~~~~~ 484 (525)
T 3qp9_A 475 LDTALGHGDT 484 (525)
T ss_dssp HHHHHHHTCS
T ss_pred HHHHHhCCCC
Confidence 9988875543
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=3.2e-32 Score=280.32 Aligned_cols=238 Identities=19% Similarity=0.208 Sum_probs=182.8
Q ss_pred CCCCCEEEEecCCCc-hHHHHHHHHHHCCCeEEEeeCCchh-----HHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHH
Q 024752 10 SLKGMTALVTGGTKG-IGYAVVEELAAFGAIVHTCSRNETE-----LNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMET 83 (263)
Q Consensus 10 ~~~~k~vlVtGas~g-iG~~~a~~l~~~g~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 83 (263)
.++||++|||||++| ||+++|+.|+++|++|++++|+.+. ++++.+++...+.++..+.+|+++++++++++++
T Consensus 2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D 2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHH
Confidence 389999999999999 9999999999999999999999876 5666666665677889999999999999999999
Q ss_pred HHh----hcCCCccEEEeCCCC----CCC-CCCCCCCHHH----HHHHHHhhhHhHHHHHHHHhHHHhhCCCc----eEE
Q 024752 84 VSS----QFDGKLNILINNAGT----FIP-KETTEFTEED----FSTVMTTNFESAYHLSQLAHPLLKSAGNG----NII 146 (263)
Q Consensus 84 ~~~----~~~~~id~li~~ag~----~~~-~~~~~~~~~~----~~~~~~~n~~~~~~~~~~~~~~~~~~~~~----~iv 146 (263)
+.+ .| |++|+||||||+ ... ....+.+.++ ++..+++|+.+.+.+++++.+.|.+++.+ .++
T Consensus 2213 i~~~~~~~f-G~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~ 2291 (3089)
T 3zen_D 2213 VGTEQTESL-GPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVL 2291 (3089)
T ss_dssp HTSCCEEEE-SSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEE
T ss_pred HHhhhhhhc-CCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEE
Confidence 998 78 899999999998 211 2222223333 45559999999999999999999876532 233
Q ss_pred EEccccccccCCCCcchhhHHHHHHHHHHHHHHH--HccCCcEEEEEecCccc-CCccccccccchhHHHHHHhHhcCCC
Q 024752 147 FISSVAGVIAIPMCSIYASSKVAMNQLTKNLACE--WAKDKIRVNTVAPWVIR-TPLLDTVEKDSNFLEHANRMVLRTPM 223 (263)
Q Consensus 147 ~vsS~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e--~~~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (263)
..++..+. .++...|++||+|+++|+++++.| +++ +|+||+++||+|+ |++..... .. .......+.
T Consensus 2292 ~~ss~~g~--~g~~~aYsASKaAl~~LtrslA~E~~~a~-~IrVn~v~PG~v~tT~l~~~~~---~~----~~~~~~~~~ 2361 (3089)
T 3zen_D 2292 PGSPNRGM--FGGDGAYGEAKSALDALENRWSAEKSWAE-RVSLAHALIGWTKGTGLMGQND---AI----VSAVEEAGV 2361 (3089)
T ss_dssp EECSSTTS--CSSCSSHHHHGGGHHHHHHHHHHCSTTTT-TEEEEEEECCCEECSTTTTTTT---TT----HHHHGGGSC
T ss_pred ECCccccc--CCCchHHHHHHHHHHHHHHHHHhccccCC-CeEEEEEeecccCCCcccccch---hH----HHHHHhcCC
Confidence 33333332 234568999999999999999999 665 6999999999999 66543211 11 111122343
Q ss_pred CCCCChhhHHHHHHHHcCCCCCC-ccCcEEEeC--CCcc
Q 024752 224 LRPGEPNEVSSVVAFLCLSATSY-VTGQVICVD--GGYS 259 (263)
Q Consensus 224 ~~~~~~~~va~~~~~l~s~~~~~-~~G~~i~~d--gG~~ 259 (263)
++ .+|+|||++++||+|+.+++ .+|+.+.+| ||+.
T Consensus 2362 r~-~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~ 2399 (3089)
T 3zen_D 2362 TT-YTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLG 2399 (3089)
T ss_dssp BC-EEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCS
T ss_pred CC-CCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcC
Confidence 33 48999999999999988665 455656655 9985
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.4e-31 Score=235.08 Aligned_cols=214 Identities=22% Similarity=0.234 Sum_probs=175.4
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCc---hhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNE---TELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
+|++|||||++|||++++++|+++|+ +|++++|+. +..+++.+++...+.++.++.||++|++++.++++++.+.
T Consensus 239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~- 317 (496)
T 3mje_A 239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED- 317 (496)
T ss_dssp CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT-
T ss_pred CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh-
Confidence 49999999999999999999999999 799999964 4467778888888889999999999999999999998766
Q ss_pred CCCccEEEeCCCCC-CCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 89 DGKLNILINNAGTF-IPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 89 ~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+++|+||||||+. ...++.+.+.++|++.|++|+.|++++.+.+.+. ..++||++||..+..+.++...|+++|
T Consensus 318 -g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~----~~~~iV~~SS~a~~~g~~g~~~YaAaK 392 (496)
T 3mje_A 318 -APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL----DLDAFVLFSSGAAVWGSGGQPGYAAAN 392 (496)
T ss_dssp -SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS----CCSEEEEEEEHHHHTTCTTCHHHHHHH
T ss_pred -CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc----CCCEEEEEeChHhcCCCCCcHHHHHHH
Confidence 5899999999998 6678899999999999999999999999987543 468999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCC
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~ 244 (263)
++++.|++. +.+.||++++|+||++.++......... ..+.. ......+|+++++.+.+++....
T Consensus 393 a~ldala~~----~~~~Gi~v~sV~pG~w~~~gm~~~~~~~------~~l~~--~g~~~l~pe~~~~~l~~~l~~~~ 457 (496)
T 3mje_A 393 AYLDALAEH----RRSLGLTASSVAWGTWGEVGMATDPEVH------DRLVR--QGVLAMEPEHALGALDQMLENDD 457 (496)
T ss_dssp HHHHHHHHH----HHHTTCCCEEEEECEESSSCC------C------HHHHH--TTEEEECHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHH----HHhcCCeEEEEECCcccCCccccChHHH------HHHHh--cCCCCCCHHHHHHHHHHHHcCCC
Confidence 999988875 4456999999999999766543211111 11111 01123479999999888776443
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-30 Score=244.55 Aligned_cols=214 Identities=22% Similarity=0.293 Sum_probs=178.0
Q ss_pred CCCEEEEecCCCchHHHHHHHHH-HCCC-eEEEeeCC---chhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 12 KGMTALVTGGTKGIGYAVVEELA-AFGA-IVHTCSRN---ETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~-~~g~-~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
.+|+++||||++|||+++|++|+ ++|+ +|++++|+ .+..+++.+++...+.++.++.||++|+++++++++++.+
T Consensus 529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~ 608 (795)
T 3slk_A 529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD 608 (795)
T ss_dssp TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 58999999999999999999999 7999 59999999 5567788888888889999999999999999999999877
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhH
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASS 166 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s 166 (263)
.+ ++|+||||||+....++.+++.++|++.|++|+.|++++.+++.|.| +||++||.++..+.++...|+++
T Consensus 609 ~~--~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l------~iV~~SS~ag~~g~~g~~~YaAa 680 (795)
T 3slk_A 609 EH--PLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV------ALVLFSSVSGVLGSGGQGNYAAA 680 (795)
T ss_dssp TS--CEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS------EEEEEEETHHHHTCSSCHHHHHH
T ss_pred hC--CCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC------EEEEEccHHhcCCCCCCHHHHHH
Confidence 64 89999999999988889999999999999999999999999998777 89999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
|+ |+++++.+++++||++|+|+||++.|++......... .......... ...++++...+...+...
T Consensus 681 ka----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~~~~-----~~~~~~~g~~-~l~~~e~~~~~~~~l~~~ 747 (795)
T 3slk_A 681 NS----FLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLREAE-----QDRLARSGLL-PISTEEGLSQFDAACGGA 747 (795)
T ss_dssp HH----HHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHHHHHH-----HHHHHHTTBC-CCCHHHHHHHHHHHHTSS
T ss_pred HH----HHHHHHHHHHHcCCeEEEEECCeECcchhhccccHHH-----HHHHHhcCCC-CCCHHHHHHHHHHHHhCC
Confidence 95 6666677788889999999999999886543211111 1111122222 346777777766554433
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-29 Score=205.82 Aligned_cols=207 Identities=20% Similarity=0.163 Sum_probs=159.8
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCce-EEEeccCCCHHHHHHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQV-SGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~ 84 (263)
.+..++++|+++||||+|+||++++++|+++|++|++++|++++.+++.. ..+ .++.+|++ +.+
T Consensus 14 ~~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~------~~~~~~~~~Dl~---------~~~ 78 (236)
T 3e8x_A 14 RENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE------RGASDIVVANLE---------EDF 78 (236)
T ss_dssp -------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH------TTCSEEEECCTT---------SCC
T ss_pred ccccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh------CCCceEEEcccH---------HHH
Confidence 34566899999999999999999999999999999999999988765543 246 88899998 334
Q ss_pred HhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC---CCCc
Q 024752 85 SSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI---PMCS 161 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~---~~~~ 161 (263)
.+.+ +++|+||||||.... +++++.+++|+.++.++++++ ++.+.++||++||..+..+. +...
T Consensus 79 ~~~~-~~~D~vi~~ag~~~~--------~~~~~~~~~n~~~~~~l~~a~----~~~~~~~iv~~SS~~~~~~~~~~~~~~ 145 (236)
T 3e8x_A 79 SHAF-ASIDAVVFAAGSGPH--------TGADKTILIDLWGAIKTIQEA----EKRGIKRFIMVSSVGTVDPDQGPMNMR 145 (236)
T ss_dssp GGGG-TTCSEEEECCCCCTT--------SCHHHHHHTTTHHHHHHHHHH----HHHTCCEEEEECCTTCSCGGGSCGGGH
T ss_pred HHHH-cCCCEEEECCCCCCC--------CCccccchhhHHHHHHHHHHH----HHcCCCEEEEEecCCCCCCCCChhhhh
Confidence 4445 689999999997532 457889999999999999998 44456899999997776554 4567
Q ss_pred chhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcC
Q 024752 162 IYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCL 241 (263)
Q Consensus 162 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s 241 (263)
.|+.+|++++.+.+ ..|++++.++||++.++.......... .......+.+++|+|+++++++.
T Consensus 146 ~Y~~sK~~~e~~~~-------~~gi~~~~lrpg~v~~~~~~~~~~~~~---------~~~~~~~~i~~~Dva~~~~~~~~ 209 (236)
T 3e8x_A 146 HYLVAKRLADDELK-------RSSLDYTIVRPGPLSNEESTGKVTVSP---------HFSEITRSITRHDVAKVIAELVD 209 (236)
T ss_dssp HHHHHHHHHHHHHH-------HSSSEEEEEEECSEECSCCCSEEEEES---------SCSCCCCCEEHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHH-------HCCCCEEEEeCCcccCCCCCCeEEecc---------CCCcccCcEeHHHHHHHHHHHhc
Confidence 89999999999876 459999999999999986543221110 11123567789999999999987
Q ss_pred CCCCCccCcEEEeCCCc
Q 024752 242 SATSYVTGQVICVDGGY 258 (263)
Q Consensus 242 ~~~~~~~G~~i~~dgG~ 258 (263)
... .+|+.+++++|.
T Consensus 210 ~~~--~~g~~~~v~~~~ 224 (236)
T 3e8x_A 210 QQH--TIGKTFEVLNGD 224 (236)
T ss_dssp CGG--GTTEEEEEEECS
T ss_pred Ccc--ccCCeEEEeCCC
Confidence 543 689999998874
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=6.9e-29 Score=223.12 Aligned_cols=213 Identities=20% Similarity=0.203 Sum_probs=173.5
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCe-EEEeeCCch---hHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAI-VHTCSRNET---ELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
.++++|||||+||||++++++|+++|++ |++++|+.. ..+++.+++...+.++.++.||++|++++.++++++ +.
T Consensus 225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-~~ 303 (486)
T 2fr1_A 225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-GD 303 (486)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-CT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-Hh
Confidence 4799999999999999999999999994 999999875 456777778777888999999999999999999998 55
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+ +++|+||||||+.....+.+.+.+++++.+++|+.|++++.+++.+ .+.++||++||..+..+.++...|+++|
T Consensus 304 ~-g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~----~~~~~~V~~SS~a~~~g~~g~~~Yaaak 378 (486)
T 2fr1_A 304 D-VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRE----LDLTAFVLFSSFASAFGAPGLGGYAPGN 378 (486)
T ss_dssp T-SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT----SCCSEEEEEEEHHHHTCCTTCTTTHHHH
T ss_pred c-CCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCc----CCCCEEEEEcChHhcCCCCCCHHHHHHH
Confidence 5 7999999999998888888899999999999999999999998743 4568999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCC-ccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCC
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTP-LLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~ 244 (263)
++++.|++.+ ..+|+++++|+||++.++ |..... . ..+. .....+.+++++++++..++....
T Consensus 379 a~l~~la~~~----~~~gi~v~~i~pG~~~~~gm~~~~~-----~---~~~~--~~g~~~i~~e~~a~~l~~~l~~~~ 442 (486)
T 2fr1_A 379 AYLDGLAQQR----RSDGLPATAVAWGTWAGSGMAEGPV-----A---DRFR--RHGVIEMPPETACRALQNALDRAE 442 (486)
T ss_dssp HHHHHHHHHH----HHTTCCCEEEEECCBC--------------------CT--TTTEECBCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHH----HhcCCeEEEEECCeeCCCcccchhH-----H---HHHH--hcCCCCCCHHHHHHHHHHHHhCCC
Confidence 9999887644 456999999999999876 332110 0 0110 011235689999999988776443
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.6e-28 Score=218.63 Aligned_cols=209 Identities=22% Similarity=0.242 Sum_probs=173.9
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCch---hHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNET---ELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
.+|++|||||+||||++++++|+++|+ +|++++|+.. ..+++.+++...+.++.++.||++|++++.++++.
T Consensus 258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~---- 333 (511)
T 2z5l_A 258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA---- 333 (511)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH----
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc----
Confidence 479999999999999999999999999 6999999874 45677778877788899999999999999998876
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+++|+||||||+.....+.+.+.+++++.+++|+.|++++.+.+.+. .+.++||++||..+..+.++...|+++|
T Consensus 334 --~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~---~~~~~~V~~SS~a~~~g~~g~~~YaaaK 408 (511)
T 2z5l_A 334 --YPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADI---KGLDAFVLFSSVTGTWGNAGQGAYAAAN 408 (511)
T ss_dssp --SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC---TTCCCEEEEEEGGGTTCCTTBHHHHHHH
T ss_pred --CCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc---cCCCEEEEEeCHHhcCCCCCCHHHHHHH
Confidence 58999999999988888888999999999999999999999887432 1458999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcc-cCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVI-RTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
++++.|++.+ ...|+++++|+||++ +|+|...... ..+.. ......+++++++.+...+...
T Consensus 409 a~ld~la~~~----~~~gi~v~sv~pG~~~~tgm~~~~~~--------~~~~~--~g~~~l~~e~~a~~l~~al~~~ 471 (511)
T 2z5l_A 409 AALDALAERR----RAAGLPATSVAWGLWGGGGMAAGAGE--------ESLSR--RGLRAMDPDAAVDALLGAMGRN 471 (511)
T ss_dssp HHHHHHHHHH----HTTTCCCEEEEECCBCSTTCCCCHHH--------HHHHH--HTBCCBCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHH----HHcCCcEEEEECCcccCCcccccccH--------HHHHh--cCCCCCCHHHHHHHHHHHHhCC
Confidence 9999998864 456999999999999 7777653211 01110 1123568999999998776543
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=9.2e-28 Score=200.27 Aligned_cols=197 Identities=16% Similarity=0.167 Sum_probs=156.9
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
|++|++|||||+||||++++++|+++|++|++++|++.+.+ +.++.++.+|+++++++.++++
T Consensus 1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~-------- 63 (267)
T 3rft_A 1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---------GPNEECVQCDLADANAVNAMVA-------- 63 (267)
T ss_dssp CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---------CTTEEEEECCTTCHHHHHHHHT--------
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---------CCCCEEEEcCCCCHHHHHHHHc--------
Confidence 35689999999999999999999999999999999976532 4568899999999999988874
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccc------------ccCC
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGV------------IAIP 158 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~------------~~~~ 158 (263)
++|+||||||.. +.+.|++.+++|+.+++++++++ ++.+.++||++||..++ .+.+
T Consensus 64 ~~D~vi~~Ag~~--------~~~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~ 131 (267)
T 3rft_A 64 GCDGIVHLGGIS--------VEKPFEQILQGNIIGLYNLYEAA----RAHGQPRIVFASSNHTIGYYPQTERLGPDVPAR 131 (267)
T ss_dssp TCSEEEECCSCC--------SCCCHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCC
T ss_pred CCCEEEECCCCc--------CcCCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCC
Confidence 689999999984 23457899999999999999999 44557899999998876 2334
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHH
Q 024752 159 MCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAF 238 (263)
Q Consensus 159 ~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ 238 (263)
+...|+.||++.+.+++.++.++ |++++.|+||.+.++....... ..+.+++|+++.+..
T Consensus 132 ~~~~Y~~sK~~~e~~~~~~a~~~---g~~~~~vr~~~v~~~~~~~~~~-----------------~~~~~~~d~a~~~~~ 191 (267)
T 3rft_A 132 PDGLYGVSKCFGENLARMYFDKF---GQETALVRIGSCTPEPNNYRML-----------------STWFSHDDFVSLIEA 191 (267)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECBCSSSCCSTTHH-----------------HHBCCHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHHHHh---CCeEEEEEeecccCCCCCCCce-----------------eeEEcHHHHHHHHHH
Confidence 55789999999999999999887 8999999999999875432110 123568999998887
Q ss_pred HcCCCCCCccCcEEEeCCCc
Q 024752 239 LCLSATSYVTGQVICVDGGY 258 (263)
Q Consensus 239 l~s~~~~~~~G~~i~~dgG~ 258 (263)
++.... ..+..+++.++.
T Consensus 192 ~~~~~~--~~~~~~~~~s~~ 209 (267)
T 3rft_A 192 VFRAPV--LGCPVVWGASAN 209 (267)
T ss_dssp HHHCSC--CCSCEEEECCCC
T ss_pred HHhCCC--CCceEEEEeCCC
Confidence 765432 234555555443
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-27 Score=204.94 Aligned_cols=227 Identities=14% Similarity=0.051 Sum_probs=168.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc-hhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE-TELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
|++|||||+|+||++++++|+++|++|++++|+. .........+... .++.++.+|+++++++.++++. .++
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~-~~~~~~~~Dl~d~~~~~~~~~~------~~~ 74 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSL-GNFEFVHGDIRNKNDVTRLITK------YMP 74 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTT-CCCEEEECCTTCHHHHHHHHHH------HCC
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccC-CceEEEEcCCCCHHHHHHHHhc------cCC
Confidence 5899999999999999999999999999999864 2333334444432 3578899999999999888864 268
Q ss_pred cEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc----------------
Q 024752 93 NILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA---------------- 156 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~---------------- 156 (263)
|+|||+||..... .+.+++++.+++|+.++.++++++.+.+. .++||++||...+..
T Consensus 75 d~vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~l~~a~~~~~~---~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~ 147 (347)
T 1orr_A 75 DSCFHLAGQVAMT----TSIDNPCMDFEINVGGTLNLLEAVRQYNS---NCNIIYSSTNKVYGDLEQYKYNETETRYTCV 147 (347)
T ss_dssp SEEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHHHCT---TCEEEEEEEGGGGTTCTTSCEEECSSCEEET
T ss_pred CEEEECCcccChh----hhhhCHHHHHHHHHHHHHHHHHHHHHhCC---CceEEEeccHHHhCCCCcCCccccccccccc
Confidence 9999999974321 23567889999999999999999977642 269999999765421
Q ss_pred -----------CCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcC----
Q 024752 157 -----------IPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRT---- 221 (263)
Q Consensus 157 -----------~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~---- 221 (263)
.++...|+.+|.+.+.+++.++.++ |++++.++||++.++..........+...........
T Consensus 148 ~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (347)
T 1orr_A 148 DKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGIN 224 (347)
T ss_dssp TCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCC
T ss_pred ccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCC
Confidence 2245679999999999999998886 8999999999999987543211111111111111111
Q ss_pred -CC---------CCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCc
Q 024752 222 -PM---------LRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGY 258 (263)
Q Consensus 222 -~~---------~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~ 258 (263)
|. ..+.+++|+++++++++.. ....+|+.+++++|.
T Consensus 225 ~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~-~~~~~g~~~~v~~~~ 270 (347)
T 1orr_A 225 KPFTISGNGKQVRDVLHAEDMISLYFTALAN-VSKIRGNAFNIGGTI 270 (347)
T ss_dssp CCEEEESSSCCEEECEEHHHHHHHHHHHHHT-HHHHTTCEEEESSCG
T ss_pred CCeEEecCCcceEeeEEHHHHHHHHHHHHhc-cccCCCCEEEeCCCC
Confidence 22 1256799999999988863 234679999999985
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.95 E-value=6.6e-28 Score=205.85 Aligned_cols=226 Identities=16% Similarity=0.084 Sum_probs=167.0
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
+....+.|++|||||+|+||++++++|+++|++|++++|+... +. + .+.++.+|+++++++.++++.
T Consensus 6 ~~~~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l-----~~~~~~~Dl~d~~~~~~~~~~--- 72 (321)
T 2pk3_A 6 HHHHHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P-----NVEMISLDIMDSQRVKKVISD--- 72 (321)
T ss_dssp -------CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T-----TEEEEECCTTCHHHHHHHHHH---
T ss_pred cccccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c-----eeeEEECCCCCHHHHHHHHHh---
Confidence 3455678999999999999999999999999999999998764 21 1 578889999999999888764
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC---------
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI--------- 157 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~--------- 157 (263)
+++|+|||+||..... .+.+++++.+++|+.++.++++++ +.+ ++.++||++||...+...
T Consensus 73 ---~~~d~vih~A~~~~~~----~~~~~~~~~~~~Nv~g~~~l~~a~-~~~--~~~~~iv~~SS~~v~g~~~~~~~~~~E 142 (321)
T 2pk3_A 73 ---IKPDYIFHLAAKSSVK----DSWLNKKGTFSTNVFGTLHVLDAV-RDS--NLDCRILTIGSSEEYGMILPEESPVSE 142 (321)
T ss_dssp ---HCCSEEEECCSCCCHH----HHTTCHHHHHHHHHHHHHHHHHHH-HHH--TCCCEEEEEEEGGGTBSCCGGGCSBCT
T ss_pred ---cCCCEEEEcCcccchh----hhhhcHHHHHHHHHHHHHHHHHHH-HHh--CCCCeEEEEccHHhcCCCCCCCCCCCC
Confidence 3699999999975421 123467889999999999999999 444 246899999998765332
Q ss_pred ----CCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHh--H---------hcCC
Q 024752 158 ----PMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRM--V---------LRTP 222 (263)
Q Consensus 158 ----~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~--~---------~~~~ 222 (263)
++...|+.+|++.+.+++.++.++ |++++.++||.+.+|..........+....... . ...+
T Consensus 143 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 219 (321)
T 2pk3_A 143 ENQLRPMSPYGVSKASVGMLARQYVKAY---GMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEA 219 (321)
T ss_dssp TSCCBCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSC
T ss_pred CCCCCCCCccHHHHHHHHHHHHHHHHHc---CCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCc
Confidence 346789999999999999998875 899999999999998764321111111111110 0 0112
Q ss_pred CCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 223 MLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 223 ~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
...+.+++|+++++++++... .+|+.+++++|..++
T Consensus 220 ~~~~v~v~Dva~a~~~~~~~~---~~g~~~~i~~~~~~s 255 (321)
T 2pk3_A 220 VRDFTDVRDIVQAYWLLSQYG---KTGDVYNVCSGIGTR 255 (321)
T ss_dssp EEEEEEHHHHHHHHHHHHHHC---CTTCEEEESCSCEEE
T ss_pred EEeeEEHHHHHHHHHHHHhCC---CCCCeEEeCCCCCee
Confidence 234577999999999888654 468999999987543
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.7e-27 Score=204.99 Aligned_cols=234 Identities=15% Similarity=0.086 Sum_probs=172.6
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHh-cCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS-KGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
++|++|||||+|+||++++++|+++|++|++++|+.....+..+++.. .+..+.++.+|+++++++.+++++ +
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~------~ 77 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA------H 77 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH------S
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc------c
Confidence 468999999999999999999999999999999988776666555543 255688999999999999998875 4
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc-----------CCC
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA-----------IPM 159 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~~~ 159 (263)
++|+||||||...... ..+...+.+++|+.++.++++++ ++.+.++||++||...+.. ..+
T Consensus 78 ~~d~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~ 149 (341)
T 3enk_A 78 PITAAIHFAALKAVGE----SVAKPIEYYRNNLDSLLSLLRVM----RERAVKRIVFSSSATVYGVPERSPIDETFPLSA 149 (341)
T ss_dssp CCCEEEECCCCCCHHH----HHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBC
T ss_pred CCcEEEECccccccCc----cccChHHHHHHHHHHHHHHHHHH----HhCCCCEEEEEecceEecCCCCCCCCCCCCCCC
Confidence 7999999999864332 34556688999999999988776 5556689999999776521 123
Q ss_pred CcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccc------cchhHHHHHHhHhc--C----------
Q 024752 160 CSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEK------DSNFLEHANRMVLR--T---------- 221 (263)
Q Consensus 160 ~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~------~~~~~~~~~~~~~~--~---------- 221 (263)
...|+.+|.+.+.+++.++.++. |++++.++|+.+..+....... ...+.......... .
T Consensus 150 ~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 227 (341)
T 3enk_A 150 TNPYGQTKLMAEQILRDVEAADP--SWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYP 227 (341)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSS
T ss_pred CChhHHHHHHHHHHHHHHhhcCC--CceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccC
Confidence 46799999999999999988863 5999999999998875421110 01111111111111 1
Q ss_pred -----CCCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 222 -----PMLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 222 -----~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
....+..++|+++++++++........|+.+++++|..++
T Consensus 228 ~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s 272 (341)
T 3enk_A 228 TPDGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYS 272 (341)
T ss_dssp STTSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEE
T ss_pred CCCCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCcee
Confidence 1123556899999998887642223469999999987653
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-26 Score=199.50 Aligned_cols=229 Identities=15% Similarity=0.139 Sum_probs=169.9
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHh-cCCceEEE-eccCCCHHHHHHHHHHHH
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS-KGLQVSGS-VCDLKIRAQREKLMETVS 85 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~-~~D~~~~~~~~~~~~~~~ 85 (263)
+..+++|++|||||+|+||++++++|+++|++|++++|+....+.+.+.+.. .+.++.++ .+|+++.+++.+++
T Consensus 6 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~---- 81 (342)
T 1y1p_A 6 AVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI---- 81 (342)
T ss_dssp CSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT----
T ss_pred ccCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHH----
Confidence 4457899999999999999999999999999999999998877666555443 23567888 89999988776654
Q ss_pred hhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccc-cCC------
Q 024752 86 SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVI-AIP------ 158 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-~~~------ 158 (263)
.++|+|||+||..... +++++.+++|+.++.++++++.+ +.+.++||++||...+. +.+
T Consensus 82 ----~~~d~vih~A~~~~~~-------~~~~~~~~~n~~g~~~ll~~~~~---~~~~~~iv~~SS~~~~~~~~~~~~~~~ 147 (342)
T 1y1p_A 82 ----KGAAGVAHIASVVSFS-------NKYDEVVTPAIGGTLNALRAAAA---TPSVKRFVLTSSTVSALIPKPNVEGIY 147 (342)
T ss_dssp ----TTCSEEEECCCCCSCC-------SCHHHHHHHHHHHHHHHHHHHHT---CTTCCEEEEECCGGGTCCCCTTCCCCE
T ss_pred ----cCCCEEEEeCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHh---CCCCcEEEEeccHHHhcCCCCCCCCcc
Confidence 3689999999976432 24577999999999999999854 23457999999987652 211
Q ss_pred ------------------------CCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHH
Q 024752 159 ------------------------MCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHA 214 (263)
Q Consensus 159 ------------------------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~ 214 (263)
+...|+.+|.+.+.+++.++.++.. +++++.++||.+.++...............
T Consensus 148 ~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~ 226 (342)
T 1y1p_A 148 LDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIFDPETQSGSTSGWM 226 (342)
T ss_dssp ECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCSCTTTCCCHHHHHH
T ss_pred cCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECCCCCCCCCCccHHHHH
Confidence 2257999999999999999999876 899999999999998764322110111111
Q ss_pred HHhHhc--------CCCCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCC
Q 024752 215 NRMVLR--------TPMLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGG 257 (263)
Q Consensus 215 ~~~~~~--------~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG 257 (263)
...... .+...+.+++|+|++++.++.. ...+|+.+..+|+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~--~~~~g~~~~~~g~ 275 (342)
T 1y1p_A 227 MSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVL--PQIERRRVYGTAG 275 (342)
T ss_dssp HHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHC--TTCCSCEEEECCE
T ss_pred HHHHcCCCccccccCCcCCEeEHHHHHHHHHHHHcC--cccCCceEEEeCC
Confidence 111111 1334567899999999887754 2356876666654
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=9.6e-27 Score=201.32 Aligned_cols=235 Identities=12% Similarity=0.017 Sum_probs=173.1
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchh----HHHHHHHHHh-cCCceEEEeccCCCHHHHHHHH
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE----LNQRIQEWKS-KGLQVSGSVCDLKIRAQREKLM 81 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~----~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~ 81 (263)
+.+++++|++|||||+|+||++++++|+++|++|++++|+... ++++.+++.. .+.++.++.+|+++.+++.+++
T Consensus 21 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 100 (352)
T 1sb8_A 21 KELPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC 100 (352)
T ss_dssp HHHHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH
T ss_pred hhcCccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHh
Confidence 3456788999999999999999999999999999999997642 3333222211 0246888999999998888776
Q ss_pred HHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCC---
Q 024752 82 ETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIP--- 158 (263)
Q Consensus 82 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~--- 158 (263)
+ ++|+|||+||...... +.+++++.+++|+.++.++++++.+ .+.++||++||...+...+
T Consensus 101 ~--------~~d~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~~~~~~ 164 (352)
T 1sb8_A 101 A--------GVDYVLHQAALGSVPR----SINDPITSNATNIDGFLNMLIAARD----AKVQSFTYAASSSTYGDHPGLP 164 (352)
T ss_dssp T--------TCSEEEECCSCCCHHH----HHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGTTCCCSS
T ss_pred c--------CCCEEEECCcccCchh----hhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHhcCCCCCCC
Confidence 3 6899999999753221 4567889999999999999999854 4567999999987764432
Q ss_pred --------CCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccch-hHHHHHHhHhcCCC------
Q 024752 159 --------MCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSN-FLEHANRMVLRTPM------ 223 (263)
Q Consensus 159 --------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~------ 223 (263)
+...|+.+|.+.+.+++.++.++ |++++.++||.+.++.......... ............+.
T Consensus 165 ~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g 241 (352)
T 1sb8_A 165 KVEDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDG 241 (352)
T ss_dssp BCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSS
T ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCC
Confidence 35689999999999999998886 8999999999999987543211111 11111222222221
Q ss_pred ---CCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 224 ---LRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 224 ---~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
..+..++|+++++++++... ....|+.+++++|..++
T Consensus 242 ~~~~~~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~s 281 (352)
T 1sb8_A 242 ETSRDFCYIENTVQANLLAATAG-LDARNQVYNIAVGGRTS 281 (352)
T ss_dssp CCEECCEEHHHHHHHHHHHHTCC-GGGCSEEEEESCSCCEE
T ss_pred CceEeeEEHHHHHHHHHHHHhcc-ccCCCceEEeCCCCCcc
Confidence 24667999999988877642 24579999999987543
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-26 Score=198.86 Aligned_cols=218 Identities=16% Similarity=0.080 Sum_probs=169.7
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHC-CC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAF-GA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~-g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
+++|++|||||+|+||++++++|+++ |+ +|++++|++.+.++..+++. ..++.++.+|++|.+++.+++
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~------- 89 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN--DPRMRFFIGDVRDLERLNYAL------- 89 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC--CTTEEEEECCTTCHHHHHHHT-------
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc--CCCEEEEECCCCCHHHHHHHH-------
Confidence 78999999999999999999999999 98 99999999887776665553 346889999999998887766
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
.++|+|||+||...... ...+..+.+++|+.++.++++++.+ .+.++||++||..+..+ ...|+.+|+
T Consensus 90 -~~~D~Vih~Aa~~~~~~----~~~~~~~~~~~Nv~gt~~l~~aa~~----~~v~~~V~~SS~~~~~p---~~~Y~~sK~ 157 (344)
T 2gn4_A 90 -EGVDICIHAAALKHVPI----AEYNPLECIKTNIMGASNVINACLK----NAISQVIALSTDKAANP---INLYGATKL 157 (344)
T ss_dssp -TTCSEEEECCCCCCHHH----HHHSHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEECCGGGSSC---CSHHHHHHH
T ss_pred -hcCCEEEECCCCCCCCc----hhcCHHHHHHHHHHHHHHHHHHHHh----CCCCEEEEecCCccCCC---ccHHHHHHH
Confidence 36899999999764211 2345678999999999999999955 34679999999766543 578999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcC---------CCCCCCChhhHHHHHHHH
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRT---------PMLRPGEPNEVSSVVAFL 239 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~va~~~~~l 239 (263)
+.+.++++++.++++.|+++++++||.|.++...... .+. ....... ....+.+++|++++++++
T Consensus 158 ~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~i~---~~~---~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~ 231 (344)
T 2gn4_A 158 CSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVP---FFK---KLVQNKASEIPITDIRMTRFWITLDEGVSFVLKS 231 (344)
T ss_dssp HHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTSHHH---HHH---HHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCCHHH---HHH---HHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHH
Confidence 9999999999888888999999999999987532111 111 1111111 112357799999999988
Q ss_pred cCCCCCCccCcEEEeCCCc
Q 024752 240 CLSATSYVTGQVICVDGGY 258 (263)
Q Consensus 240 ~s~~~~~~~G~~i~~dgG~ 258 (263)
+.... .|+.++++++.
T Consensus 232 l~~~~---~g~~~~~~~~~ 247 (344)
T 2gn4_A 232 LKRMH---GGEIFVPKIPS 247 (344)
T ss_dssp HHHCC---SSCEEEECCCE
T ss_pred Hhhcc---CCCEEecCCCc
Confidence 76432 58888887763
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.95 E-value=6.1e-28 Score=198.11 Aligned_cols=199 Identities=13% Similarity=0.131 Sum_probs=151.9
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
+++++|+++||||+|+||++++++|+++|+ +|++++|+++..++.. ...+.++.+|+++++++.+++
T Consensus 14 ~~m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~------~~~~~~~~~D~~d~~~~~~~~----- 82 (242)
T 2bka_A 14 FRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA------YKNVNQEVVDFEKLDDYASAF----- 82 (242)
T ss_dssp HHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG------GGGCEEEECCGGGGGGGGGGG-----
T ss_pred hhhcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc------cCCceEEecCcCCHHHHHHHh-----
Confidence 347789999999999999999999999999 9999999876543221 124778899999988877655
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhH
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASS 166 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s 166 (263)
.++|+||||||... ..+.+++.+++|+.++.++++++ ++.+.++||++||..+..+ ....|+.+
T Consensus 83 ---~~~d~vi~~ag~~~-------~~~~~~~~~~~n~~~~~~~~~~~----~~~~~~~iv~~SS~~~~~~--~~~~Y~~s 146 (242)
T 2bka_A 83 ---QGHDVGFCCLGTTR-------GKAGAEGFVRVDRDYVLKSAELA----KAGGCKHFNLLSSKGADKS--SNFLYLQV 146 (242)
T ss_dssp ---SSCSEEEECCCCCH-------HHHHHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTCCTT--CSSHHHHH
T ss_pred ---cCCCEEEECCCccc-------ccCCcccceeeeHHHHHHHHHHH----HHCCCCEEEEEccCcCCCC--CcchHHHH
Confidence 46999999999642 23457889999999999988876 4555689999999877643 45689999
Q ss_pred HHHHHHHHHHHHHHHccCCc-EEEEEecCcccCCccccccccchhHHHHHHhHhcCC----CCCCCChhhHHHHHHHHcC
Q 024752 167 KVAMNQLTKNLACEWAKDKI-RVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTP----MLRPGEPNEVSSVVAFLCL 241 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi-~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~va~~~~~l~s 241 (263)
|++++.+++.+ ++ +++.|+||++.|++...... ... ........| .+++.+++|+|++++++++
T Consensus 147 K~~~e~~~~~~-------~~~~~~~vrpg~v~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~ 215 (242)
T 2bka_A 147 KGEVEAKVEEL-------KFDRYSVFRPGVLLCDRQESRPG-EWL---VRKFFGSLPDSWASGHSVPVVTVVRAMLNNVV 215 (242)
T ss_dssp HHHHHHHHHTT-------CCSEEEEEECCEEECTTGGGSHH-HHH---HHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhc-------CCCCeEEEcCceecCCCCCCcHH-HHH---HHHhhcccCccccCCcccCHHHHHHHHHHHHh
Confidence 99999998754 56 79999999999997532110 111 112222233 4567889999999999998
Q ss_pred CCCC
Q 024752 242 SATS 245 (263)
Q Consensus 242 ~~~~ 245 (263)
+...
T Consensus 216 ~~~~ 219 (242)
T 2bka_A 216 RPRD 219 (242)
T ss_dssp SCCC
T ss_pred Cccc
Confidence 7654
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-27 Score=204.77 Aligned_cols=220 Identities=14% Similarity=0.076 Sum_probs=159.2
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
.++.++++|++|||||+|+||++++++|+++|++|++++|+.....+..+++ .++.++.+|+++.+++.++++++
T Consensus 13 ~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l----~~v~~~~~Dl~d~~~~~~~~~~~- 87 (330)
T 2pzm_A 13 GLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV----AGLSVIEGSVTDAGLLERAFDSF- 87 (330)
T ss_dssp -CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC----TTEEEEECCTTCHHHHHHHHHHH-
T ss_pred CCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc----CCceEEEeeCCCHHHHHHHHhhc-
Confidence 4567899999999999999999999999999999999999754322111111 35788999999999998888654
Q ss_pred hhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC-----C--
Q 024752 86 SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI-----P-- 158 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----~-- 158 (263)
++|+||||||..... +.++++ +++|+.++.++++++. +.+.++||++||...+... +
T Consensus 88 -----~~D~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~----~~~~~~iV~~SS~~~~~~~~~~~~~~~ 151 (330)
T 2pzm_A 88 -----KPTHVVHSAAAYKDP-----DDWAED--AATNVQGSINVAKAAS----KAGVKRLLNFQTALCYGRPATVPIPID 151 (330)
T ss_dssp -----CCSEEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHH----HHTCSEEEEEEEGGGGCSCSSSSBCTT
T ss_pred -----CCCEEEECCccCCCc-----cccChh--HHHHHHHHHHHHHHHH----HcCCCEEEEecCHHHhCCCccCCCCcC
Confidence 689999999976432 335555 9999999999999985 3346799999998775433 2
Q ss_pred ----CCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCC------CCCCCC
Q 024752 159 ----MCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTP------MLRPGE 228 (263)
Q Consensus 159 ----~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 228 (263)
+...|+.+|++++.+++.+ ++....|+|+.+..|... ...............+ ...+.+
T Consensus 152 E~~~~~~~Y~~sK~~~e~~~~~~-------~~~~~~iR~~~v~gp~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 220 (330)
T 2pzm_A 152 SPTAPFTSYGISKTAGEAFLMMS-------DVPVVSLRLANVTGPRLA----IGPIPTFYKRLKAGQKCFCSDTVRDFLD 220 (330)
T ss_dssp CCCCCCSHHHHHHHHHHHHHHTC-------SSCEEEEEECEEECTTCC----SSHHHHHHHHHHTTCCCCEESCEECEEE
T ss_pred CCCCCCChHHHHHHHHHHHHHHc-------CCCEEEEeeeeeECcCCC----CCHHHHHHHHHHcCCEEeCCCCEeccee
Confidence 5678999999999999876 455566666665554421 0000000111111001 245678
Q ss_pred hhhHHH-HHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 229 PNEVSS-VVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 229 ~~~va~-~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
++|+|+ ++++++.... |+.+++++|..++
T Consensus 221 ~~Dva~~a~~~~~~~~~----g~~~~v~~~~~~s 250 (330)
T 2pzm_A 221 MSDFLAIADLSLQEGRP----TGVFNVSTGEGHS 250 (330)
T ss_dssp HHHHHHHHHHHTSTTCC----CEEEEESCSCCEE
T ss_pred HHHHHHHHHHHHhhcCC----CCEEEeCCCCCCC
Confidence 999999 9999887532 9999999987643
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.9e-26 Score=185.05 Aligned_cols=190 Identities=9% Similarity=-0.005 Sum_probs=146.0
Q ss_pred CEEEEecCCCchHHHHHHHHH-HCCCeEEEeeCCch-hHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 14 MTALVTGGTKGIGYAVVEELA-AFGAIVHTCSRNET-ELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~-~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
|+++||||+|+||++++++|+ ++|++|++++|+++ .++++. ..+..+.++.+|++|++++.++++ .
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~~--------~ 73 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----IDHERVTVIEGSFQNPGXLEQAVT--------N 73 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HTSTTEEEEECCTTCHHHHHHHHT--------T
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cCCCceEEEECCCCCHHHHHHHHc--------C
Confidence 789999999999999999999 89999999999987 554443 235678999999999999888773 6
Q ss_pred ccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCc----------
Q 024752 92 LNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCS---------- 161 (263)
Q Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~---------- 161 (263)
+|+||||||.. |+. .+.+++.|++.+.++||++||..+..+.+...
T Consensus 74 ~d~vv~~ag~~-------------------n~~-----~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~ 129 (221)
T 3r6d_A 74 AEVVFVGAMES-------------------GSD-----MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPI 129 (221)
T ss_dssp CSEEEESCCCC-------------------HHH-----HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCH
T ss_pred CCEEEEcCCCC-------------------Chh-----HHHHHHHHHhcCCCeEEEEeeceecCCCCccccccccccccc
Confidence 89999999953 222 77888888888788999999998877655433
Q ss_pred chhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCC-ccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHc
Q 024752 162 IYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTP-LLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC 240 (263)
Q Consensus 162 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~ 240 (263)
.|..+|.+++.+.+. .|++++.|+||++.++ .......... .....+.+.+++|+|+++++++
T Consensus 130 ~y~~~K~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~~---------~~~~~~~~~~~~dvA~~~~~l~ 193 (221)
T 3r6d_A 130 SYVQGERQARNVLRE-------SNLNYTILRLTWLYNDPEXTDYELIPE---------GAQFNDAQVSREAVVKAIFDIL 193 (221)
T ss_dssp HHHHHHHHHHHHHHH-------SCSEEEEEEECEEECCTTCCCCEEECT---------TSCCCCCEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh-------CCCCEEEEechhhcCCCCCcceeeccC---------CccCCCceeeHHHHHHHHHHHH
Confidence 899999999988763 5999999999999887 3222211110 0112234678999999999999
Q ss_pred --CCCCCCccCcEEEeCC
Q 024752 241 --LSATSYVTGQVICVDG 256 (263)
Q Consensus 241 --s~~~~~~~G~~i~~dg 256 (263)
++...++++ .+.+++
T Consensus 194 ~~~~~~~~~~~-~~~i~~ 210 (221)
T 3r6d_A 194 HAADETPFHRT-SIGVGE 210 (221)
T ss_dssp TCSCCGGGTTE-EEEEEC
T ss_pred HhcChhhhhcc-eeeecC
Confidence 877665554 444443
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.94 E-value=7.8e-27 Score=200.43 Aligned_cols=224 Identities=13% Similarity=0.039 Sum_probs=164.6
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCC--CeEEEeeCCch--hHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNET--ELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g--~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
+++++|||||+|+||++++++|+++| ++|++++|+.. ..+.+ .++. .+.++.++.+|+++++++.+++
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~------ 73 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLE-DDPRYTFVKGDVADYELVKELV------ 73 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTT-TCTTEEEEECCTTCHHHHHHHH------
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhc-cCCceEEEEcCCCCHHHHHHHh------
Confidence 45789999999999999999999997 89999998642 11111 1111 1346888999999999888877
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccc-----------c
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVI-----------A 156 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-----------~ 156 (263)
+++|+|||+||..... .+.+++++.+++|+.++.++++++.+. ...++||++||...+. +
T Consensus 74 --~~~d~vih~A~~~~~~----~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~E~~~ 144 (336)
T 2hun_A 74 --RKVDGVVHLAAESHVD----RSISSPEIFLHSNVIGTYTLLESIRRE---NPEVRFVHVSTDEVYGDILKGSFTENDR 144 (336)
T ss_dssp --HTCSEEEECCCCCCHH----HHHHCTHHHHHHHHHHHHHHHHHHHHH---CTTSEEEEEEEGGGGCCCSSSCBCTTBC
T ss_pred --hCCCEEEECCCCcChh----hhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEeccHHHHCCCCCCCcCCCCC
Confidence 3689999999975321 245677889999999999999999765 2247999999976432 2
Q ss_pred CCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcC---------CCCCCC
Q 024752 157 IPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRT---------PMLRPG 227 (263)
Q Consensus 157 ~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 227 (263)
.++...|+.+|++.+.+++.++.++ |++++.++||.+.++..... .............. +...+.
T Consensus 145 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 218 (336)
T 2hun_A 145 LMPSSPYSATKAASDMLVLGWTRTY---NLNASITRCTNNYGPYQFPE---KLIPKTIIRASLGLKIPIYGTGKNVRDWL 218 (336)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEEECEEESTTCCTT---SHHHHHHHHHHTTCCEEEETC---CEEEE
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeeeeeCcCCCcC---chHHHHHHHHHcCCCceEeCCCCceeeeE
Confidence 3345689999999999999998875 89999999999999875321 11111111221111 123456
Q ss_pred ChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 228 EPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 228 ~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
.++|+++++++++... .+|+.+++++|..++
T Consensus 219 ~v~Dva~~~~~~~~~~---~~g~~~~v~~~~~~s 249 (336)
T 2hun_A 219 YVEDHVRAIELVLLKG---ESREIYNISAGEEKT 249 (336)
T ss_dssp EHHHHHHHHHHHHHHC---CTTCEEEECCSCEEC
T ss_pred EHHHHHHHHHHHHhCC---CCCCEEEeCCCCccc
Confidence 7999999999888643 369999999997543
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1e-26 Score=201.53 Aligned_cols=225 Identities=14% Similarity=0.071 Sum_probs=167.2
Q ss_pred EEEEecCCCchHHHHHHHHHHC-CCeEEEeeCCch--hHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 15 TALVTGGTKGIGYAVVEELAAF-GAIVHTCSRNET--ELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~-g~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
++|||||+|+||++++++|++. |++|++++|+.. ..+.+ .++. .+.++.++.+|+++++++.+++++ .+
T Consensus 2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~------~~ 73 (361)
T 1kew_A 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDIS-ESNRYNFEHADICDSAEITRIFEQ------YQ 73 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTT-TCTTEEEEECCTTCHHHHHHHHHH------HC
T ss_pred EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhh-cCCCeEEEECCCCCHHHHHHHHhh------cC
Confidence 5999999999999999999998 799999998752 22211 1111 134688899999999999888864 27
Q ss_pred ccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-----CCceEEEEccccccc-----------
Q 024752 92 LNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-----GNGNIIFISSVAGVI----------- 155 (263)
Q Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~vsS~~~~~----------- 155 (263)
+|+||||||.... +.+.+++++.+++|+.++.++++++.+.|..- ++++||++||...+.
T Consensus 74 ~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~ 149 (361)
T 1kew_A 74 PDAVMHLAAESHV----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENS 149 (361)
T ss_dssp CSEEEECCSCCCH----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTT
T ss_pred CCEEEECCCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCccccccccc
Confidence 9999999997532 12456788899999999999999999887531 135999999975432
Q ss_pred ----------cCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcC----
Q 024752 156 ----------AIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRT---- 221 (263)
Q Consensus 156 ----------~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~---- 221 (263)
+.++...|+.+|++.+.+++.++.++ |++++.++||.+.++...... .............
T Consensus 150 ~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~vrp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~ 223 (361)
T 1kew_A 150 VTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEK---LIPLVILNALEGKPLPI 223 (361)
T ss_dssp SCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTS---HHHHHHHHHHHTCCEEE
T ss_pred ccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCcEEEEeeceeECCCCCccc---HHHHHHHHHHcCCCceE
Confidence 12345689999999999999999887 899999999999998753211 1111112221111
Q ss_pred -----CCCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCccc
Q 024752 222 -----PMLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 222 -----~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
+...+.+++|+++++++++... .+|+.+++++|..+
T Consensus 224 ~~~~~~~~~~i~v~Dva~a~~~~~~~~---~~g~~~~v~~~~~~ 264 (361)
T 1kew_A 224 YGKGDQIRDWLYVEDHARALHMVVTEG---KAGETYNIGGHNEK 264 (361)
T ss_dssp ETTSCCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCCCEE
T ss_pred cCCCceeEeeEEHHHHHHHHHHHHhCC---CCCCEEEecCCCee
Confidence 1234567999999999888643 37999999999754
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=8.8e-26 Score=195.06 Aligned_cols=235 Identities=16% Similarity=0.073 Sum_probs=175.8
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcC-----CceEEEeccCCCHHHHHHHH
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG-----LQVSGSVCDLKIRAQREKLM 81 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~ 81 (263)
.++.+++|+||||||+|+||++++++|+++|++|++++|+..........+.... .++.++.+|+++.+++.+++
T Consensus 19 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 98 (351)
T 3ruf_A 19 QQLIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVM 98 (351)
T ss_dssp HHHHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHT
T ss_pred hhCCCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHh
Confidence 4466789999999999999999999999999999999998765544444444321 46889999999998888776
Q ss_pred HHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCC---
Q 024752 82 ETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIP--- 158 (263)
Q Consensus 82 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~--- 158 (263)
.++|+|||+||..... .+.+++...+++|+.++.++++++ ++.+.+++|++||...+...+
T Consensus 99 --------~~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~v~~SS~~vyg~~~~~~ 162 (351)
T 3ruf_A 99 --------KGVDHVLHQAALGSVP----RSIVDPITTNATNITGFLNILHAA----KNAQVQSFTYAASSSTYGDHPALP 162 (351)
T ss_dssp --------TTCSEEEECCCCCCHH----HHHHCHHHHHHHHTHHHHHHHHHH----HHTTCSEEEEEEEGGGGTTCCCSS
T ss_pred --------cCCCEEEECCccCCcc----hhhhCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEecHHhcCCCCCCC
Confidence 3689999999975432 245677889999999999999998 444567999999987654322
Q ss_pred --------CCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccch-hHHHHHHhHhcCCC------
Q 024752 159 --------MCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSN-FLEHANRMVLRTPM------ 223 (263)
Q Consensus 159 --------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~------ 223 (263)
+...|+.+|.+.+.+++.++.++ |++++.++|+.+..+.......... +...........+.
T Consensus 163 ~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g 239 (351)
T 3ruf_A 163 KVEENIGNPLSPYAVTKYVNEIYAQVYARTY---GFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDG 239 (351)
T ss_dssp BCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSS
T ss_pred CccCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCC
Confidence 24679999999999999998876 8999999999999886543211111 11112222222221
Q ss_pred ---CCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 224 ---LRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 224 ---~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
..+..++|++++++.++... ....|+.+++.+|..++
T Consensus 240 ~~~~~~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~s 279 (351)
T 3ruf_A 240 ETSRDFCYIDNVIQMNILSALAK-DSAKDNIYNVAVGDRTT 279 (351)
T ss_dssp CCEECCEEHHHHHHHHHHHHTCC-GGGCSEEEEESCSCCEE
T ss_pred CeEEeeEEHHHHHHHHHHHHhhc-cccCCCEEEeCCCCccc
Confidence 23566999999998877542 34579999999987653
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4e-26 Score=188.01 Aligned_cols=215 Identities=13% Similarity=0.030 Sum_probs=157.5
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHC--CCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAF--GAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
+++|+++||||+|+||++++++|+++ |++|++++|++++.++. ..++.++.+|+++++++.++++
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~------ 68 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-------GGEADVFIGDITDADSINPAFQ------ 68 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-------TCCTTEEECCTTSHHHHHHHHT------
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-------CCCeeEEEecCCCHHHHHHHHc------
Confidence 46799999999999999999999999 89999999997655432 3456788999999998888763
Q ss_pred CCCccEEEeCCCCCCCCCC---------CCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCC
Q 024752 89 DGKLNILINNAGTFIPKET---------TEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPM 159 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~---------~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~ 159 (263)
.+|+||||||....... .+...+.+++.+++|+.++.++++++. +.+.++||++||..+..+.++
T Consensus 69 --~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~ 142 (253)
T 1xq6_A 69 --GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAK----VAGVKHIVVVGSMGGTNPDHP 142 (253)
T ss_dssp --TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHH----HHTCSEEEEEEETTTTCTTCG
T ss_pred --CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHH----HcCCCEEEEEcCccCCCCCCc
Confidence 58999999997643110 122334456788999999999998874 344679999999887654433
Q ss_pred Ccc-----hhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHH
Q 024752 160 CSI-----YASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSS 234 (263)
Q Consensus 160 ~~~-----Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~ 234 (263)
... |..+|.+++.+++. .|++++.++||++.++............ ..... ....+.+++|+++
T Consensus 143 ~~~~~~~~y~~sK~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~Dva~ 210 (253)
T 1xq6_A 143 LNKLGNGNILVWKRKAEQYLAD-------SGTPYTIIRAGGLLDKEGGVRELLVGKD---DELLQ--TDTKTVPRADVAE 210 (253)
T ss_dssp GGGGGGCCHHHHHHHHHHHHHT-------SSSCEEEEEECEEECSCSSSSCEEEEST---TGGGG--SSCCEEEHHHHHH
T ss_pred cccccchhHHHHHHHHHHHHHh-------CCCceEEEecceeecCCcchhhhhccCC---cCCcC--CCCcEEcHHHHHH
Confidence 333 55699999988753 5899999999999988643211000000 01111 1234678999999
Q ss_pred HHHHHcCCCCCCccCcEEEeCCCc
Q 024752 235 VVAFLCLSATSYVTGQVICVDGGY 258 (263)
Q Consensus 235 ~~~~l~s~~~~~~~G~~i~~dgG~ 258 (263)
++++++.... .+|+.++++++.
T Consensus 211 ~~~~~~~~~~--~~g~~~~i~~~~ 232 (253)
T 1xq6_A 211 VCIQALLFEE--AKNKAFDLGSKP 232 (253)
T ss_dssp HHHHHTTCGG--GTTEEEEEEECC
T ss_pred HHHHHHcCcc--ccCCEEEecCCC
Confidence 9999887532 479999999863
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-25 Score=194.42 Aligned_cols=231 Identities=14% Similarity=0.040 Sum_probs=170.1
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
+++|++|||||+|+||++++++|+++|++|++++|+..........+. .+.++.++.+|+++++++.++++.+
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~------ 79 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR-VADGMQSEIGDIRDQNKLLESIREF------ 79 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT-TTTTSEEEECCTTCHHHHHHHHHHH------
T ss_pred hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc-cCCceEEEEccccCHHHHHHHHHhc------
Confidence 678999999999999999999999999999999998766544443332 2346788999999999998888753
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccc------------cCC
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVI------------AIP 158 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~------------~~~ 158 (263)
++|+|||+||.... +.+.+++++.+++|+.++.++++++.+. ...++||++||...+. +..
T Consensus 80 ~~d~vih~A~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~ 152 (357)
T 1rkx_A 80 QPEIVFHMAAQPLV----RLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWGYRENEAMG 152 (357)
T ss_dssp CCSEEEECCSCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSCBCTTSCBC
T ss_pred CCCEEEECCCCccc----ccchhCHHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEecCHHHhCCCCcCCCCCCCCCCC
Confidence 68999999996321 1245678899999999999999999653 2257999999986432 223
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHc------cCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCC--------CC
Q 024752 159 MCSIYASSKVAMNQLTKNLACEWA------KDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTP--------ML 224 (263)
Q Consensus 159 ~~~~Y~~sK~a~~~~~~~~a~e~~------~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 224 (263)
+...|+.+|.+.+.+++.++.++. +.|++++.++||.+.+|..... ...+...........+ ..
T Consensus 153 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~ 230 (357)
T 1rkx_A 153 GYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWAL--DRIVPDILRAFEQSQPVIIRNPHAIR 230 (357)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCS--SCHHHHHHHHHHTTCCEECSCTTCEE
T ss_pred CCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCcc--ccHHHHHHHHHhcCCCEEECCCCCee
Confidence 456899999999999999999885 4589999999999999864211 1111111122111111 12
Q ss_pred CCCChhhHHHHHHHHcCCC--CCCccCcEEEeCCC
Q 024752 225 RPGEPNEVSSVVAFLCLSA--TSYVTGQVICVDGG 257 (263)
Q Consensus 225 ~~~~~~~va~~~~~l~s~~--~~~~~G~~i~~dgG 257 (263)
.+..++|++++++.++... .....|+.+++.+|
T Consensus 231 ~~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~ 265 (357)
T 1rkx_A 231 PWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPN 265 (357)
T ss_dssp CCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCC
T ss_pred ccEeHHHHHHHHHHHHHhhhhcCCCCCceEEECCC
Confidence 3567899999988776421 11235789999875
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.9e-26 Score=183.69 Aligned_cols=192 Identities=15% Similarity=0.188 Sum_probs=155.5
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCC-HHHHHHHHHHHHhhcCCCcc
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKI-RAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~id 93 (263)
+++||||+|+||++++++|+++|++|++++|++++.++. ..+.++.+|+++ ++++.+++ ..+|
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~~~~~D~~d~~~~~~~~~--------~~~d 65 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--------NNVKAVHFDVDWTPEEMAKQL--------HGMD 65 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--------TTEEEEECCTTSCHHHHHTTT--------TTCS
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--------CCceEEEecccCCHHHHHHHH--------cCCC
Confidence 699999999999999999999999999999998754322 458899999999 88877765 4699
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCC-------CcchhhH
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPM-------CSIYASS 166 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~-------~~~Y~~s 166 (263)
+||||||.... ..+++|+.++.++++++ ++.+.++||++||..+..+.+. ...|+.+
T Consensus 66 ~vi~~ag~~~~------------~~~~~n~~~~~~l~~a~----~~~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~s 129 (219)
T 3dqp_A 66 AIINVSGSGGK------------SLLKVDLYGAVKLMQAA----EKAEVKRFILLSTIFSLQPEKWIGAGFDALKDYYIA 129 (219)
T ss_dssp EEEECCCCTTS------------SCCCCCCHHHHHHHHHH----HHTTCCEEEEECCTTTTCGGGCCSHHHHHTHHHHHH
T ss_pred EEEECCcCCCC------------CcEeEeHHHHHHHHHHH----HHhCCCEEEEECcccccCCCcccccccccccHHHHH
Confidence 99999997642 16789999999999888 4555679999999888766655 6789999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
|.+.+.+.+ ...|++++.++||++.++........ ......+.+++|+|+++++++....
T Consensus 130 K~~~e~~~~------~~~~i~~~ilrp~~v~g~~~~~~~~~------------~~~~~~~i~~~Dva~~i~~~l~~~~-- 189 (219)
T 3dqp_A 130 KHFADLYLT------KETNLDYTIIQPGALTEEEATGLIDI------------NDEVSASNTIGDVADTIKELVMTDH-- 189 (219)
T ss_dssp HHHHHHHHH------HSCCCEEEEEEECSEECSCCCSEEEE------------SSSCCCCEEHHHHHHHHHHHHTCGG--
T ss_pred HHHHHHHHH------hccCCcEEEEeCceEecCCCCCcccc------------CCCcCCcccHHHHHHHHHHHHhCcc--
Confidence 999999886 35699999999999998754332211 1345567789999999999887543
Q ss_pred ccCcEEEeCCCc
Q 024752 247 VTGQVICVDGGY 258 (263)
Q Consensus 247 ~~G~~i~~dgG~ 258 (263)
..|+.+++++|.
T Consensus 190 ~~g~~~~i~~g~ 201 (219)
T 3dqp_A 190 SIGKVISMHNGK 201 (219)
T ss_dssp GTTEEEEEEECS
T ss_pred ccCcEEEeCCCC
Confidence 459999997774
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-25 Score=193.65 Aligned_cols=230 Identities=13% Similarity=0.050 Sum_probs=161.3
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCC--CeEEEeeCCchhH-HHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHH
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETEL-NQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g--~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 84 (263)
.|++++|+||||||+|+||++++++|+++| ++|+..+|..... .+..+.+ ....++.++.+|+++++++.++++.
T Consensus 19 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~- 96 (346)
T 4egb_A 19 YFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSI-QDHPNYYFVKGEIQNGELLEHVIKE- 96 (346)
T ss_dssp -----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTT-TTCTTEEEEECCTTCHHHHHHHHHH-
T ss_pred ccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhh-ccCCCeEEEEcCCCCHHHHHHHHhh-
Confidence 345788999999999999999999999999 6788888764211 1111111 1124688999999999999998875
Q ss_pred HhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCC------
Q 024752 85 SSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIP------ 158 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~------ 158 (263)
.++|+|||+||...... ..+++++.+++|+.++.++++++ ++.+.+++|++||...+...+
T Consensus 97 -----~~~d~Vih~A~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~v~~SS~~vy~~~~~~~~~~ 163 (346)
T 4egb_A 97 -----RDVQVIVNFAAESHVDR----SIENPIPFYDTNVIGTVTLLELV----KKYPHIKLVQVSTDEVYGSLGKTGRFT 163 (346)
T ss_dssp -----HTCCEEEECCCCC-------------CHHHHHHTHHHHHHHHHH----HHSTTSEEEEEEEGGGGCCCCSSCCBC
T ss_pred -----cCCCEEEECCcccchhh----hhhCHHHHHHHHHHHHHHHHHHH----HhcCCCEEEEeCchHHhCCCCcCCCcC
Confidence 26899999999865432 45677889999999999999998 444567999999976554321
Q ss_pred ------CCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCC---------
Q 024752 159 ------MCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPM--------- 223 (263)
Q Consensus 159 ------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--------- 223 (263)
+...|+.+|.+.+.+++.++.++ |++++.++|+.+.++...... .............+.
T Consensus 164 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 237 (346)
T 4egb_A 164 EETPLAPNSPYSSSKASADMIALAYYKTY---QLPVIVTRCSNNYGPYQYPEK---LIPLMVTNALEGKKLPLYGDGLNV 237 (346)
T ss_dssp TTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTS---HHHHHHHHHHTTCCCEEETTSCCE
T ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeecceeCcCCCccc---hHHHHHHHHHcCCCceeeCCCCeE
Confidence 23679999999999999998876 899999999999987653221 111111222222221
Q ss_pred CCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 224 LRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 224 ~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
..+..++|+++++++++.... .|+.+++.+|..++
T Consensus 238 ~~~i~v~Dva~a~~~~~~~~~---~g~~~~i~~~~~~s 272 (346)
T 4egb_A 238 RDWLHVTDHCSAIDVVLHKGR---VGEVYNIGGNNEKT 272 (346)
T ss_dssp ECEEEHHHHHHHHHHHHHHCC---TTCEEEECCSCCEE
T ss_pred EeeEEHHHHHHHHHHHHhcCC---CCCEEEECCCCcee
Confidence 123458999999998886544 69999999987543
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.4e-25 Score=189.88 Aligned_cols=226 Identities=15% Similarity=0.050 Sum_probs=161.4
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHH-HHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQ-RIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
|++|++|||||+|+||++++++|+++|++|++++|+....+. ..+++. ...++.++.+|++|++++.++++.+
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~----- 74 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELG-IENDVKIIHMDLLEFSNIIRTIEKV----- 74 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTT-CTTTEEECCCCTTCHHHHHHHHHHH-----
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhcc-ccCceeEEECCCCCHHHHHHHHHhc-----
Confidence 468999999999999999999999999999999998765321 112211 1235888999999999999888754
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccc-----------ccCC
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGV-----------IAIP 158 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~-----------~~~~ 158 (263)
++|+||||||..... .+.+++++.+++|+.++.++++++.+. ...++||++||...+ .+.+
T Consensus 75 -~~d~vih~A~~~~~~----~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~ 146 (345)
T 2z1m_A 75 -QPDEVYNLAAQSFVG----VSFEQPILTAEVDAIGVLRILEALRTV---KPDTKFYQASTSEMFGKVQEIPQTEKTPFY 146 (345)
T ss_dssp -CCSEEEECCCCCCHH----HHTTSHHHHHHHHTHHHHHHHHHHHHH---CTTCEEEEEEEGGGGCSCSSSSBCTTSCCC
T ss_pred -CCCEEEECCCCcchh----hhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCceEEEEechhhcCCCCCCCCCccCCCC
Confidence 689999999975321 123568899999999999999999742 113799999998643 1234
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHc---cCCcEEEEEecCcccCCccccccccchhHHHHHHhHhc---------CCC-CC
Q 024752 159 MCSIYASSKVAMNQLTKNLACEWA---KDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLR---------TPM-LR 225 (263)
Q Consensus 159 ~~~~Y~~sK~a~~~~~~~~a~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~-~~ 225 (263)
+...|+.+|++.+.+++.++.++. ..++.++.+.||...+.+..... ......... .+. ..
T Consensus 147 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 220 (345)
T 2z1m_A 147 PRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKIT------YSLARIKYGLQDKLVLGNLNAKRD 220 (345)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHH------HHHHHHHTTSCSCEEESCTTCEEC
T ss_pred CCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHH------HHHHHHHcCCCCeeeeCCCCceee
Confidence 457899999999999999999875 33455667778777665432111 000111000 011 23
Q ss_pred CCChhhHHHHHHHHcCCCCCCccCcEEEeCCCccc
Q 024752 226 PGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 226 ~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
+.+++|+++++++++.... ++.+++.+|..+
T Consensus 221 ~~~v~Dva~a~~~~~~~~~----~~~~~i~~~~~~ 251 (345)
T 2z1m_A 221 WGYAPEYVEAMWLMMQQPE----PDDYVIATGETH 251 (345)
T ss_dssp CEEHHHHHHHHHHHHTSSS----CCCEEECCSCCE
T ss_pred eEEHHHHHHHHHHHHhCCC----CceEEEeCCCCc
Confidence 6789999999999887543 467888877654
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=6.8e-26 Score=192.68 Aligned_cols=219 Identities=20% Similarity=0.148 Sum_probs=159.8
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCccE
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNI 94 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 94 (263)
++|||||+|+||++++++|+++|++|++++|......+ .....+.++.+|+++++++.+++++ .++|+
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~------~~~~~~~~~~~Dl~~~~~~~~~~~~------~~~d~ 69 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE------NVPKGVPFFRVDLRDKEGVERAFRE------FRPTH 69 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG------GSCTTCCEECCCTTCHHHHHHHHHH------HCCSE
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh------hcccCeEEEECCCCCHHHHHHHHHh------cCCCE
Confidence 69999999999999999999999999999985432111 1113467789999999999888764 26899
Q ss_pred EEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc-------------CCCCc
Q 024752 95 LINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA-------------IPMCS 161 (263)
Q Consensus 95 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-------------~~~~~ 161 (263)
+||+|+..... .+.+++++.+++|+.++.++++++. +.+.++||++||..+..+ ..+..
T Consensus 70 vi~~a~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~ 141 (311)
T 2p5y_A 70 VSHQAAQASVK----VSVEDPVLDFEVNLLGGLNLLEACR----QYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKS 141 (311)
T ss_dssp EEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHH----HTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCS
T ss_pred EEECccccCch----hhhhCHHHHHHHHHHHHHHHHHHHH----HhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCC
Confidence 99999975321 2456788999999999999999984 444579999999822211 12356
Q ss_pred chhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCC--------------CCCCC
Q 024752 162 IYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTP--------------MLRPG 227 (263)
Q Consensus 162 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~ 227 (263)
.|+.+|++.+.+++.++.++ |++++.++|+.+.+|......................+ ...+.
T Consensus 142 ~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i 218 (311)
T 2p5y_A 142 PYAASKAAFEHYLSVYGQSY---GLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYV 218 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEE
T ss_pred hHHHHHHHHHHHHHHHHHHc---CCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeE
Confidence 89999999999999998876 89999999999999865332111111111111111111 12356
Q ss_pred ChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 228 EPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 228 ~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
.++|+++++++++... |+.+++++|..++
T Consensus 219 ~v~Dva~a~~~~~~~~-----~~~~~i~~~~~~s 247 (311)
T 2p5y_A 219 YVGDVAEAHALALFSL-----EGIYNVGTGEGHT 247 (311)
T ss_dssp EHHHHHHHHHHHHHHC-----CEEEEESCSCCEE
T ss_pred EHHHHHHHHHHHHhCC-----CCEEEeCCCCCcc
Confidence 6899999998887642 8999999987543
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-25 Score=194.74 Aligned_cols=228 Identities=17% Similarity=0.091 Sum_probs=162.4
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHH--CCCeEEEeeCCchhHHHHH-------HHHHhcCCceEEEeccCCCHHHH
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAA--FGAIVHTCSRNETELNQRI-------QEWKSKGLQVSGSVCDLKIRAQR 77 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~--~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~ 77 (263)
..+++++|+||||||+|+||++++++|++ .|++|++++|+........ ......+..+.++.+|+++++++
T Consensus 4 ~~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~ 83 (362)
T 3sxp_A 4 IDDELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDL 83 (362)
T ss_dssp SSCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHH
T ss_pred cchhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHH
Confidence 35788999999999999999999999999 9999999999765211000 00011234578899999999988
Q ss_pred HHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC
Q 024752 78 EKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI 157 (263)
Q Consensus 78 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~ 157 (263)
.++ .. .++|+|||+||.... +.++++..+++|+.++.++++++ ++. +++||++||...+...
T Consensus 84 ~~~------~~-~~~D~vih~A~~~~~------~~~~~~~~~~~Nv~gt~~ll~aa----~~~-~~~~V~~SS~~vyg~~ 145 (362)
T 3sxp_A 84 RRL------EK-LHFDYLFHQAAVSDT------TMLNQELVMKTNYQAFLNLLEIA----RSK-KAKVIYASSAGVYGNT 145 (362)
T ss_dssp HHH------TT-SCCSEEEECCCCCGG------GCCCHHHHHHHHTHHHHHHHHHH----HHT-TCEEEEEEEGGGGCSC
T ss_pred HHh------hc-cCCCEEEECCccCCc------cccCHHHHHHHHHHHHHHHHHHH----HHc-CCcEEEeCcHHHhCCC
Confidence 877 12 579999999996432 34567899999999999999998 333 3569999996554322
Q ss_pred ----------CCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccch-hHHHHHHhHhcCC----
Q 024752 158 ----------PMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSN-FLEHANRMVLRTP---- 222 (263)
Q Consensus 158 ----------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~---- 222 (263)
.+...|+.+|.+.+.+++.++.+ ++++.++|+.+..|.......... ............+
T Consensus 146 ~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (362)
T 3sxp_A 146 KAPNVVGKNESPENVYGFSKLCMDEFVLSHSND-----NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLF 220 (362)
T ss_dssp CSSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-----SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECS
T ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHhcc-----CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEE
Confidence 12345999999999999987655 788899999998876543321111 1111122222211
Q ss_pred -----CCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 223 -----MLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 223 -----~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
...+..++|+|+++++++.... +| .+++++|..++
T Consensus 221 ~~g~~~~~~i~v~Dva~ai~~~~~~~~---~g-~~~i~~~~~~s 260 (362)
T 3sxp_A 221 EFGEQLRDFVYIEDVIQANVKAMKAQK---SG-VYNVGYSQARS 260 (362)
T ss_dssp GGGCCEEECEEHHHHHHHHHHHTTCSS---CE-EEEESCSCEEE
T ss_pred CCCCeEEccEEHHHHHHHHHHHHhcCC---CC-EEEeCCCCCcc
Confidence 2235669999999999987553 47 99999987543
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=7.1e-25 Score=175.12 Aligned_cols=199 Identities=14% Similarity=0.091 Sum_probs=150.2
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
+|+++||||+|+||++++++|+++|++|++++|+++..+.. ...++.++.+|+++++++.+++ ..+
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~--------~~~ 68 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTV--------AGQ 68 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHH--------TTC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc------cCCceEEEEecCCCHHHHHHHH--------cCC
Confidence 47999999999999999999999999999999998754321 1346788999999999888776 358
Q ss_pred cEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCC----CCcchhhHHH
Q 024752 93 NILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIP----MCSIYASSKV 168 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~----~~~~Y~~sK~ 168 (263)
|++||+||...... + .++|+.++.++++++. +.+.+++|++||...+...+ +...|+.+|.
T Consensus 69 d~vi~~a~~~~~~~-----~------~~~n~~~~~~~~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~ 133 (206)
T 1hdo_A 69 DAVIVLLGTRNDLS-----P------TTVMSEGARNIVAAMK----AHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHI 133 (206)
T ss_dssp SEEEECCCCTTCCS-----C------CCHHHHHHHHHHHHHH----HHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHH
T ss_pred CEEEECccCCCCCC-----c------cchHHHHHHHHHHHHH----HhCCCeEEEEeeeeeccCcccccccchhHHHHHH
Confidence 99999999754311 1 1378888888888774 44567999999987665443 4578999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcc-cCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVI-RTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
+++.+++. .|++++.++||++ .++........ . ...|.+.+.+++|+++++++++... ..
T Consensus 134 ~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~---------~-~~~~~~~~i~~~Dva~~~~~~~~~~--~~ 194 (206)
T 1hdo_A 134 RMHKVLRE-------SGLKYVAVMPPHIGDQPLTGAYTVT---------L-DGRGPSRVISKHDLGHFMLRCLTTD--EY 194 (206)
T ss_dssp HHHHHHHH-------TCSEEEEECCSEEECCCCCSCCEEE---------S-SSCSSCSEEEHHHHHHHHHHTTSCS--TT
T ss_pred HHHHHHHh-------CCCCEEEEeCCcccCCCCCcceEec---------c-cCCCCCCccCHHHHHHHHHHHhcCc--cc
Confidence 99998842 5899999999998 34432211110 0 1122246778999999999988754 36
Q ss_pred cCcEEEeCCCcc
Q 024752 248 TGQVICVDGGYS 259 (263)
Q Consensus 248 ~G~~i~~dgG~~ 259 (263)
+|+.++++||+.
T Consensus 195 ~g~~~~i~~g~~ 206 (206)
T 1hdo_A 195 DGHSTYPSHQYQ 206 (206)
T ss_dssp TTCEEEEECCC-
T ss_pred cccceeeecccC
Confidence 899999999963
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=7.9e-25 Score=191.29 Aligned_cols=228 Identities=15% Similarity=0.091 Sum_probs=167.2
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
...|+.++|++|||||+|+||++++++|+++|++|++++|+....... ....+.++.+|+++.+++.+++
T Consensus 22 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~v~~~~~Dl~d~~~~~~~~---- 91 (379)
T 2c5a_A 22 EQYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE------DMFCDEFHLVDLRVMENCLKVT---- 91 (379)
T ss_dssp CCSCTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG------GGTCSEEEECCTTSHHHHHHHH----
T ss_pred cccccccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh------ccCCceEEECCCCCHHHHHHHh----
Confidence 345666789999999999999999999999999999999987543211 1235778899999999888776
Q ss_pred hhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccc----------
Q 024752 86 SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVI---------- 155 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~---------- 155 (263)
.++|+|||+||......+ ..+++++.+++|+.++.++++++. +.+.++||++||...+.
T Consensus 92 ----~~~d~Vih~A~~~~~~~~---~~~~~~~~~~~Nv~g~~~ll~a~~----~~~~~~~V~~SS~~v~~~~~~~~~~~~ 160 (379)
T 2c5a_A 92 ----EGVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMIEAAR----INGIKRFFYASSACIYPEFKQLETTNV 160 (379)
T ss_dssp ----TTCSEEEECCCCCCCHHH---HTTCHHHHHHHHHHHHHHHHHHHH----HTTCSEEEEEEEGGGSCGGGSSSSSSC
T ss_pred ----CCCCEEEECceecCcccc---cccCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEeehheeCCCCCCCccCC
Confidence 368999999997532111 134578899999999999999984 44557999999976543
Q ss_pred --------cCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccc-hhHHHHHHhHhcCC----
Q 024752 156 --------AIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDS-NFLEHANRMVLRTP---- 222 (263)
Q Consensus 156 --------~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~---- 222 (263)
+..+...|+.+|.+.+.+++.++.++ |++++.++||.+.++......... .............+
T Consensus 161 ~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (379)
T 2c5a_A 161 SLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEM 237 (379)
T ss_dssp EECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEE
T ss_pred CcCcccCCCCCCCChhHHHHHHHHHHHHHHHHHH---CCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEE
Confidence 22345679999999999999998776 899999999999998653321110 11111122211111
Q ss_pred ------CCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 223 ------MLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 223 ------~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
...+.+++|++++++.++... .|+.+++.+|..++
T Consensus 238 ~g~g~~~~~~i~v~Dva~ai~~~l~~~----~~~~~ni~~~~~~s 278 (379)
T 2c5a_A 238 WGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS 278 (379)
T ss_dssp ESCSCCEECCEEHHHHHHHHHHHHHSS----CCSCEEECCCCCEE
T ss_pred eCCCCeeEEEEEHHHHHHHHHHHhhcc----CCCeEEeCCCCccC
Confidence 224567999999999888643 47889999886543
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=5.9e-24 Score=186.88 Aligned_cols=233 Identities=14% Similarity=0.108 Sum_probs=162.4
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHH----------------HHHHH-HhcCCceEEEecc
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQ----------------RIQEW-KSKGLQVSGSVCD 70 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~----------------~~~~~-~~~~~~~~~~~~D 70 (263)
.+..++++||||||+|+||++++++|+++|++|++++|......+ ...++ ...+.++.++.+|
T Consensus 6 ~~~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~D 85 (404)
T 1i24_A 6 HHHHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGD 85 (404)
T ss_dssp ------CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESC
T ss_pred ccccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECC
Confidence 455778999999999999999999999999999999987543211 11111 1124568889999
Q ss_pred CCCHHHHHHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCC-ceEEEEc
Q 024752 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGN-GNIIFIS 149 (263)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~iv~vs 149 (263)
+++++++.++++.. ++|+|||+||...... ...+.+.+...+++|+.++.++++++.+. +. .+||++|
T Consensus 86 l~d~~~~~~~~~~~------~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~~~~V~~S 154 (404)
T 1i24_A 86 ICDFEFLAESFKSF------EPDSVVHFGEQRSAPY-SMIDRSRAVYTQHNNVIGTLNVLFAIKEF----GEECHLVKLG 154 (404)
T ss_dssp TTSHHHHHHHHHHH------CCSEEEECCSCCCHHH-HTSCHHHHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEEC
T ss_pred CCCHHHHHHHHhcc------CCCEEEECCCCCCccc-hhhCccchhhhHHHHHHHHHHHHHHHHHh----CCCcEEEEeC
Confidence 99999998887653 5899999999754321 11256778889999999999999998543 33 5999999
Q ss_pred cccccc------------------------cCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccc
Q 024752 150 SVAGVI------------------------AIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVE 205 (263)
Q Consensus 150 S~~~~~------------------------~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~ 205 (263)
|...+. +..+...|+.+|.+.+.+++.++.++ |++++.++||.|.+|......
T Consensus 155 S~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ivrp~~v~Gp~~~~~~ 231 (404)
T 1i24_A 155 TMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVKTDETE 231 (404)
T ss_dssp CGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSCCTTGG
T ss_pred cHHHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEEecceeeCCCCCccc
Confidence 976542 22235679999999999999998877 899999999999998653210
Q ss_pred c--------------cchhHHHHHHhHhcCC---------CCCCCChhhHHHHHHHHcCCCCCCccC--cEEEeCC
Q 024752 206 K--------------DSNFLEHANRMVLRTP---------MLRPGEPNEVSSVVAFLCLSATSYVTG--QVICVDG 256 (263)
Q Consensus 206 ~--------------~~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~~~l~s~~~~~~~G--~~i~~dg 256 (263)
. ...+...........+ ...+.+++|+|++++.++.... ..| +.+++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~--~~g~~~~yni~~ 305 (404)
T 1i24_A 232 MHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPA--KAGEFRVFNQFT 305 (404)
T ss_dssp GSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCC--CTTCEEEEEECS
T ss_pred cccccccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcc--cCCCceEEEECC
Confidence 0 0111111222222211 1234568999999988775332 236 7888866
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.6e-25 Score=180.60 Aligned_cols=196 Identities=13% Similarity=0.037 Sum_probs=139.3
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCC-CeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
+..|+++||||+|+||++++++|+++| ++|++++|+++.+++. ....+.++.+|++|++++.++++
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~------- 87 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP------YPTNSQIIMGDVLNHAALKQAMQ------- 87 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS------CCTTEEEEECCTTCHHHHHHHHT-------
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc------ccCCcEEEEecCCCHHHHHHHhc-------
Confidence 446899999999999999999999999 8999999998764332 12468899999999999888873
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcc-------
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSI------- 162 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~------- 162 (263)
.+|+||||+|.. +. ....+.+++.|++.+.++||++||...+.+.+....
T Consensus 88 -~~D~vv~~a~~~--------~~--------------~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~ 144 (236)
T 3qvo_A 88 -GQDIVYANLTGE--------DL--------------DIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVI 144 (236)
T ss_dssp -TCSEEEEECCST--------TH--------------HHHHHHHHHHHHHTTCCEEEEECCCCC----------------
T ss_pred -CCCEEEEcCCCC--------ch--------------hHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcc
Confidence 579999999851 11 123567788888887889999999887655443211
Q ss_pred --hhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCC-CCCCCChhhHHHHHHHH
Q 024752 163 --YASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTP-MLRPGEPNEVSSVVAFL 239 (263)
Q Consensus 163 --Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~va~~~~~l 239 (263)
+...+... ...+.+.||+++.|+||++.++......... ...+ .+++.+++|+|++++++
T Consensus 145 ~~~~~~~~~~-------~~~l~~~gi~~~~vrPg~i~~~~~~~~~~~~----------~~~~~~~~~i~~~DvA~~i~~l 207 (236)
T 3qvo_A 145 GEPLKPFRRA-------ADAIEASGLEYTILRPAWLTDEDIIDYELTS----------RNEPFKGTIVSRKSVAALITDI 207 (236)
T ss_dssp CGGGHHHHHH-------HHHHHTSCSEEEEEEECEEECCSCCCCEEEC----------TTSCCSCSEEEHHHHHHHHHHH
T ss_pred cchHHHHHHH-------HHHHHHCCCCEEEEeCCcccCCCCcceEEec----------cCCCCCCcEECHHHHHHHHHHH
Confidence 11112211 2233467999999999999987543321111 1112 35678899999999999
Q ss_pred cCCCCCCccCcEEEeCCCccc
Q 024752 240 CLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 240 ~s~~~~~~~G~~i~~dgG~~~ 260 (263)
+++...++ |+.++++++.+.
T Consensus 208 l~~~~~~~-g~~~~i~~~~~~ 227 (236)
T 3qvo_A 208 IDKPEKHI-GENIGINQPGTD 227 (236)
T ss_dssp HHSTTTTT-TEEEEEECSSCC
T ss_pred HcCccccc-CeeEEecCCCCC
Confidence 99876555 999999988653
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=5e-26 Score=193.40 Aligned_cols=217 Identities=15% Similarity=0.098 Sum_probs=161.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
|++|||||+|+||++++++|+++|++|++++|+.....+.. ...+.++.+|+++.+ +.+++ .. |
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~Dl~d~~-~~~~~--------~~-d 64 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV------NPSAELHVRDLKDYS-WGAGI--------KG-D 64 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS------CTTSEEECCCTTSTT-TTTTC--------CC-S
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc------CCCceEEECccccHH-HHhhc--------CC-C
Confidence 57999999999999999999999999999999876533221 345788999999976 54433 23 9
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc-----------CCCCcc
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA-----------IPMCSI 162 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~~~~~~ 162 (263)
+|||+||..... .+.++++..+++|+.++.++++++ ++.+.++||++||...+.. ..+...
T Consensus 65 ~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~ 136 (312)
T 3ko8_A 65 VVFHFAANPEVR----LSTTEPIVHFNENVVATFNVLEWA----RQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISV 136 (312)
T ss_dssp EEEECCSSCSSS----GGGSCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSH
T ss_pred EEEECCCCCCch----hhhhCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCCh
Confidence 999999964332 355677889999999999999998 3445679999999876532 234578
Q ss_pred hhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhc-C---------CCCCCCChhhH
Q 024752 163 YASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLR-T---------PMLRPGEPNEV 232 (263)
Q Consensus 163 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~---------~~~~~~~~~~v 232 (263)
|+.+|.+.+.+++.++.++ |++++.++||.+.+|...... ........... . ....+..++|+
T Consensus 137 Y~~sK~~~e~~~~~~~~~~---g~~~~~lrp~~v~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv 209 (312)
T 3ko8_A 137 YGAAKAAGEVMCATYARLF---GVRCLAVRYANVVGPRLRHGV----IYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDA 209 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCSSH----HHHHHHHHHHCTTEEEEC----CEECEEEHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh---CCCEEEEeeccccCcCCCCCh----HHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHH
Confidence 9999999999999999887 899999999999998754211 11111111111 1 11235669999
Q ss_pred HHHHHHHcCC-CCCCccCcEEEeCCCcccc
Q 024752 233 SSVVAFLCLS-ATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 233 a~~~~~l~s~-~~~~~~G~~i~~dgG~~~~ 261 (263)
++++++++.. ......|+.+++.+|..++
T Consensus 210 a~a~~~~~~~~~~~~~~~~~~ni~~~~~~s 239 (312)
T 3ko8_A 210 VEATLAAWKKFEEMDAPFLALNVGNVDAVR 239 (312)
T ss_dssp HHHHHHHHHHHHHSCCSEEEEEESCSSCEE
T ss_pred HHHHHHHHHhccccCCCCcEEEEcCCCcee
Confidence 9999988764 1123468999999987543
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-24 Score=187.49 Aligned_cols=232 Identities=15% Similarity=0.120 Sum_probs=163.7
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchh------HHHHHHHHHh-cCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE------LNQRIQEWKS-KGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~------~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
+|++|||||+|+||++++++|+++|++|++++|+... ..+..+++.. .+.++.++.+|+++++++.++++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~-- 79 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK-- 79 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH--
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHh--
Confidence 4789999999999999999999999999999886432 2222333332 245678899999999998888764
Q ss_pred hhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc---------
Q 024752 86 SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA--------- 156 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~--------- 156 (263)
.++|+|||+||...... +.+++++.+++|+.++.++++++ ++.+.++||++||...+..
T Consensus 80 ----~~~d~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g~~~~~~~~E~ 147 (348)
T 1ek6_A 80 ----YSFMAVIHFAGLKAVGE----SVQKPLDYYRVNLTGTIQLLEIM----KAHGVKNLVFSSSATVYGNPQYLPLDEA 147 (348)
T ss_dssp ----CCEEEEEECCSCCCHHH----HHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGGCSCSSSSBCTT
T ss_pred ----cCCCEEEECCCCcCccc----hhhchHHHHHHHHHHHHHHHHHH----HHhCCCEEEEECcHHHhCCCCCCCcCCC
Confidence 27999999999754321 34677889999999999999876 4455679999999776531
Q ss_pred ---CCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccc-c-----cchhHHHHHHhHh--cC----
Q 024752 157 ---IPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVE-K-----DSNFLEHANRMVL--RT---- 221 (263)
Q Consensus 157 ---~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~-~-----~~~~~~~~~~~~~--~~---- 221 (263)
.|....|+.+|++.+.+++.++.+ ..+++++.++|+.+..+...... . ...+......... ..
T Consensus 148 ~~~~p~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (348)
T 1ek6_A 148 HPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNV 225 (348)
T ss_dssp SCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEE
T ss_pred CCCCCCCCchHHHHHHHHHHHHHHHhc--CCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEE
Confidence 122678999999999999999887 34699999999999877421110 0 1112111111111 11
Q ss_pred -----------CCCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCccc
Q 024752 222 -----------PMLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 222 -----------~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
....+.+++|++++++.++........++.+++.+|..+
T Consensus 226 ~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~ 275 (348)
T 1ek6_A 226 FGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGY 275 (348)
T ss_dssp ECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCE
T ss_pred eCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCc
Confidence 112356689999999877753211122489999888654
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=6.8e-25 Score=189.17 Aligned_cols=221 Identities=14% Similarity=0.073 Sum_probs=158.7
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
.++.++++|+||||||+|+||++++++|+++|++|++++|+... ..+.++.+|+++.+++.++++
T Consensus 12 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------------~~~~~~~~Dl~d~~~~~~~~~--- 76 (347)
T 4id9_A 12 SGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------------TGGEEVVGSLEDGQALSDAIM--- 76 (347)
T ss_dssp ---------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------------SCCSEEESCTTCHHHHHHHHT---
T ss_pred CcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------------CCccEEecCcCCHHHHHHHHh---
Confidence 45567889999999999999999999999999999999998764 357788999999998887763
Q ss_pred hhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc---------
Q 024752 86 SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA--------- 156 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~--------- 156 (263)
++|+|||+|+.... +.+.+++.+++|+.++.++++++ ++.+.++||++||...+..
T Consensus 77 -----~~d~vih~A~~~~~------~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~V~~SS~~vyg~~~~~~~~~~ 141 (347)
T 4id9_A 77 -----GVSAVLHLGAFMSW------APADRDRMFAVNVEGTRRLLDAA----SAAGVRRFVFASSGEVYPENRPEFLPVT 141 (347)
T ss_dssp -----TCSEEEECCCCCCS------SGGGHHHHHHHHTHHHHHHHHHH----HHTTCSEEEEEEEGGGTTTTSCSSSSBC
T ss_pred -----CCCEEEECCcccCc------chhhHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEECCHHHhCCCCCCCCCcC
Confidence 68999999997543 33456899999999999999998 4455679999999665432
Q ss_pred ----CCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCccc-------------CCccccccc--------cchhH
Q 024752 157 ----IPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIR-------------TPLLDTVEK--------DSNFL 211 (263)
Q Consensus 157 ----~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~-------------t~~~~~~~~--------~~~~~ 211 (263)
..+...|+.+|.+.+.+++.++.++ |++++.++|+.+. .|....... .....
T Consensus 142 E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~ 218 (347)
T 4id9_A 142 EDHPLCPNSPYGLTKLLGEELVRFHQRSG---AMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIA 218 (347)
T ss_dssp TTSCCCCCSHHHHHHHHHHHHHHHHHHHS---SSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHH
T ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHhc---CCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHH
Confidence 2345679999999999999988774 8999999999998 322111000 01111
Q ss_pred HHHHHhHhcCC---------CCCC----CChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 212 EHANRMVLRTP---------MLRP----GEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 212 ~~~~~~~~~~~---------~~~~----~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
..........+ ...+ .+++|++++++.++.... ..|+.+++.+|..++
T Consensus 219 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~--~~~~~~ni~~~~~~s 279 (347)
T 4id9_A 219 ELLQSRDIGEPSHILARNENGRPFRMHITDTRDMVAGILLALDHPE--AAGGTFNLGADEPAD 279 (347)
T ss_dssp HHHHHHCCSSCCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGG--GTTEEEEESCSSCEE
T ss_pred HHHHHHHcCCCeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCcc--cCCCeEEECCCCccc
Confidence 11111111111 1233 678999999998886542 358999999987543
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4e-25 Score=190.59 Aligned_cols=219 Identities=16% Similarity=0.089 Sum_probs=162.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHC--CCeEEEeeCCchh-HHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 14 MTALVTGGTKGIGYAVVEELAAF--GAIVHTCSRNETE-LNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~--g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
|++|||||+|+||++++++|+++ |++|++++|+... ..+...++ ...++.++.+|+++++++.++++
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~-------- 74 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI--LGDRVELVVGDIADAELVDKLAA-------- 74 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG--CSSSEEEEECCTTCHHHHHHHHT--------
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhh--ccCCeEEEECCCCCHHHHHHHhh--------
Confidence 68999999999999999999999 8999999997531 11111111 12468889999999988887763
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccc---------------
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVI--------------- 155 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~--------------- 155 (263)
.+|+|||+||..... .+.+++++.+++|+.++.++++++.+. + ++||++||...+.
T Consensus 75 ~~d~vih~A~~~~~~----~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~-~~~v~~SS~~vyg~~~~~~~~~~~~~~~ 145 (348)
T 1oc2_A 75 KADAIVHYAAESHND----NSLNDPSPFIHTNFIGTYTLLEAARKY----D-IRFHHVSTDEVYGDLPLREDLPGHGEGP 145 (348)
T ss_dssp TCSEEEECCSCCCHH----HHHHCCHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGGCCBCCGGGSTTTTCST
T ss_pred cCCEEEECCcccCcc----chhhCHHHHHHHHHHHHHHHHHHHHHh----C-CeEEEecccceeCCCccccccccccccc
Confidence 469999999975321 234667889999999999999999654 3 4999999976432
Q ss_pred --------cCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcC------
Q 024752 156 --------AIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRT------ 221 (263)
Q Consensus 156 --------~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~------ 221 (263)
+.++...|+.+|++.+.+++.++.++ |++++.++||.+.++...... .............
T Consensus 146 ~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~ 219 (348)
T 1oc2_A 146 GEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEK---FIPRQITNILAGIKPKLYG 219 (348)
T ss_dssp TSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTS---HHHHHHHHHHHTCCCEEET
T ss_pred CCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeceeeCCCCCccc---hHHHHHHHHHcCCCceEec
Confidence 12345689999999999999998887 899999999999998753211 1111112222211
Q ss_pred ---CCCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCccc
Q 024752 222 ---PMLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 222 ---~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
+...+.+++|+++++++++... .+|+.+++++|..+
T Consensus 220 ~~~~~~~~i~v~Dva~~~~~~~~~~---~~g~~~~i~~~~~~ 258 (348)
T 1oc2_A 220 EGKNVRDWIHTNDHSTGVWAILTKG---RMGETYLIGADGEK 258 (348)
T ss_dssp TSCCEEECEEHHHHHHHHHHHHHHC---CTTCEEEECCSCEE
T ss_pred CCCceEeeEEHHHHHHHHHHHhhCC---CCCCeEEeCCCCCC
Confidence 1234667999999999888643 36999999998754
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=5.6e-25 Score=187.15 Aligned_cols=214 Identities=14% Similarity=0.074 Sum_probs=158.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
|++|||||+|+||++++++|+++|..|++..|+....+. ....+.++.+|+++ +++.+++ .++|
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~-------~~~~~~~~~~Dl~~-~~~~~~~--------~~~d 65 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEF-------VNEAARLVKADLAA-DDIKDYL--------KGAE 65 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGG-------SCTTEEEECCCTTT-SCCHHHH--------TTCS
T ss_pred CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhh-------cCCCcEEEECcCCh-HHHHHHh--------cCCC
Confidence 579999999999999999999999666665555443221 13458889999998 7777766 3689
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccc-----------cCCCCcc
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVI-----------AIPMCSI 162 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-----------~~~~~~~ 162 (263)
++||+|+.... ..+.+++++.+++|+.++.++++++ ++.+.++||++||...+. +..+...
T Consensus 66 ~vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~ 137 (313)
T 3ehe_A 66 EVWHIAANPDV----RIGAENPDEIYRNNVLATYRLLEAM----RKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISL 137 (313)
T ss_dssp EEEECCCCCCC----C-CCCCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSH
T ss_pred EEEECCCCCCh----hhhhhCHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCH
Confidence 99999996433 2345678899999999999999986 444567999999987652 2334577
Q ss_pred hhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhc----------CCCCCCCChhhH
Q 024752 163 YASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLR----------TPMLRPGEPNEV 232 (263)
Q Consensus 163 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~v 232 (263)
|+.+|.+.+.+++.++.++ |++++.++|+.+.++..... ............ .....+..++|+
T Consensus 138 Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv 210 (313)
T 3ehe_A 138 YGASKLACEALIESYCHTF---DMQAWIYRFANVIGRRSTHG----VIYDFIMKLKRNPEELEILGNGEQNKSYIYISDC 210 (313)
T ss_dssp HHHHHHHHHHHHHHHHHHT---TCEEEEEECSCEESTTCCCS----HHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHH
T ss_pred HHHHHHHHHHHHHHHHHhc---CCCEEEEeeccccCcCCCcC----hHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHH
Confidence 9999999999999998876 89999999999998754321 111111111111 112346678999
Q ss_pred HHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 233 SSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 233 a~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
++++++++.+. ..|+.+++.+|..++
T Consensus 211 a~a~~~~~~~~---~~~~~~ni~~~~~~s 236 (313)
T 3ehe_A 211 VDAMLFGLRGD---ERVNIFNIGSEDQIK 236 (313)
T ss_dssp HHHHHHHTTCC---SSEEEEECCCSCCEE
T ss_pred HHHHHHHhccC---CCCceEEECCCCCee
Confidence 99999988733 358999999987543
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-24 Score=189.52 Aligned_cols=225 Identities=13% Similarity=0.059 Sum_probs=163.2
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCC-CeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
..+++|+++||||+|+||++++++|+++| ++|++++|+.....+... ....+.++.+|+++++++.+++
T Consensus 28 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~----~~~~v~~~~~Dl~d~~~l~~~~------ 97 (377)
T 2q1s_A 28 SKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP----DHPAVRFSETSITDDALLASLQ------ 97 (377)
T ss_dssp GGGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSC----CCTTEEEECSCTTCHHHHHHCC------
T ss_pred HHhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhcc----CCCceEEEECCCCCHHHHHHHh------
Confidence 34788999999999999999999999999 999999998654221110 1346888999999998776654
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-CCceEEEEccccccc-----------
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-GNGNIIFISSVAGVI----------- 155 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~~~----------- 155 (263)
.++|+|||+||..... .+.+++++.+++|+.++.++++++ ++. +.++||++||...+.
T Consensus 98 --~~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E 167 (377)
T 2q1s_A 98 --DEYDYVFHLATYHGNQ----SSIHDPLADHENNTLTTLKLYERL----KHFKRLKKVVYSAAGCSIAEKTFDDAKATE 167 (377)
T ss_dssp --SCCSEEEECCCCSCHH----HHHHCHHHHHHHHTHHHHHHHHHH----TTCSSCCEEEEEEEC--------------C
T ss_pred --hCCCEEEECCCccCch----hhhhCHHHHHHHHHHHHHHHHHHH----HHhCCCCeEEEeCCHHHcCCCCCCCcCccc
Confidence 3789999999975322 134677889999999999999998 444 457999999976431
Q ss_pred -----cC-CCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcc---------ccccc-cchhHHHHHHhHh
Q 024752 156 -----AI-PMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLL---------DTVEK-DSNFLEHANRMVL 219 (263)
Q Consensus 156 -----~~-~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~---------~~~~~-~~~~~~~~~~~~~ 219 (263)
+. .+...|+.+|.+.+.+++.++.++ |++++.++||.+.++.. ..... .............
T Consensus 168 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 244 (377)
T 2q1s_A 168 ETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH---QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALK 244 (377)
T ss_dssp CCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHT
T ss_pred ccccccccCCCCchHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHc
Confidence 11 345679999999999999998776 89999999999998865 21100 1111111222222
Q ss_pred cCCC---------CCCCChhhHHHH-HHHHcCCCCCCccCcEEEeCCCccc
Q 024752 220 RTPM---------LRPGEPNEVSSV-VAFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 220 ~~~~---------~~~~~~~~va~~-~~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
..+. ..+..++|++++ ++.++.... +| .+++++|..+
T Consensus 245 g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~---~g-~~~i~~~~~~ 291 (377)
T 2q1s_A 245 GMPLPLENGGVATRDFIFVEDVANGLIACAADGTP---GG-VYNIASGKET 291 (377)
T ss_dssp TCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCCT---TE-EEECCCCCCE
T ss_pred CCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcCC---CC-eEEecCCCce
Confidence 2222 234558999999 888876543 68 9999998654
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=7.1e-24 Score=184.39 Aligned_cols=230 Identities=13% Similarity=0.042 Sum_probs=157.5
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHH-HHHHHHHh----cCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN-QRIQEWKS----KGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
+|+++||||+|+||++++++|+++|++|++++|+..... +..+++.. .+.++.++.+|+++++++.++++.+
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV--- 77 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence 478999999999999999999999999999999865421 11122211 1346888999999999999888754
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC----------
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI---------- 157 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~---------- 157 (263)
++|+||||||..... .+.+++++.+++|+.++.++++++.+...+ +.++||++||...+...
T Consensus 78 ---~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~SS~~v~g~~~~~~~~E~~~ 149 (372)
T 1db3_A 78 ---QPDEVYNLGAMSHVA----VSFESPEYTADVDAMGTLRLLEAIRFLGLE-KKTRFYQASTSELYGLVQEIPQKETTP 149 (372)
T ss_dssp ---CCSEEEECCCCCTTT----TTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGGTTCCSSSBCTTSC
T ss_pred ---CCCEEEECCcccCcc----ccccCHHHHHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCChhhhCCCCCCCCCccCC
Confidence 689999999976432 244567889999999999999999765433 23799999997654321
Q ss_pred -CCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcC----------CCCCC
Q 024752 158 -PMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRT----------PMLRP 226 (263)
Q Consensus 158 -~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 226 (263)
.+...|+.+|++.+.+++.++.++ |+.+..+.|..+..|..........+........... ....+
T Consensus 150 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~ 226 (372)
T 1db3_A 150 FYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDW 226 (372)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECC
T ss_pred CCCCChHHHHHHHHHHHHHHHHHHh---CCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeee
Confidence 235689999999999999999876 6777778887776654322110011111111111111 11235
Q ss_pred CChhhHHHHHHHHcCCCCCCccCcEEEeCCCccc
Q 024752 227 GEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 227 ~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
.+++|++++++.++.... ++.+++.+|..+
T Consensus 227 i~v~Dva~a~~~~~~~~~----~~~~ni~~~~~~ 256 (372)
T 1db3_A 227 GHAKDYVKMQWMMLQQEQ----PEDFVIATGVQY 256 (372)
T ss_dssp EEHHHHHHHHHHTTSSSS----CCCEEECCCCCE
T ss_pred eEHHHHHHHHHHHHhcCC----CceEEEcCCCce
Confidence 678999999987765332 477888887654
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.93 E-value=8.9e-25 Score=187.67 Aligned_cols=217 Identities=13% Similarity=0.023 Sum_probs=155.4
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
...+++|++|||||+|+||++++++|+++|++|++++|+.....+...+ -.++.++.+|+++++++.++++.
T Consensus 16 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~----~~~~~~~~~Dl~d~~~~~~~~~~---- 87 (333)
T 2q1w_A 16 PRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKD----HPNLTFVEGSIADHALVNQLIGD---- 87 (333)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCC----CTTEEEEECCTTCHHHHHHHHHH----
T ss_pred eecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhh----cCCceEEEEeCCCHHHHHHHHhc----
Confidence 3457889999999999999999999999999999999986432111110 03578899999999998888764
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccc----cC------
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVI----AI------ 157 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~----~~------ 157 (263)
+++|+||||||..... +.++++ +++|+.++.++++++.+ .+.++||++||...+. ..
T Consensus 88 --~~~D~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~g~~~~~~~~~~~E 154 (333)
T 2q1w_A 88 --LQPDAVVHTAASYKDP-----DDWYND--TLTNCVGGSNVVQAAKK----NNVGRFVYFQTALCYGVKPIQQPVRLDH 154 (333)
T ss_dssp --HCCSEEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGCSCCCSSSBCTTS
T ss_pred --cCCcEEEECceecCCC-----ccCChH--HHHHHHHHHHHHHHHHH----hCCCEEEEECcHHHhCCCcccCCCCcCC
Confidence 3699999999976442 234444 99999999999999854 4457999999977653 21
Q ss_pred --CCC-cchhhHHHHHHHHHHH-HHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHh------cCCCCCCC
Q 024752 158 --PMC-SIYASSKVAMNQLTKN-LACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVL------RTPMLRPG 227 (263)
Q Consensus 158 --~~~-~~Y~~sK~a~~~~~~~-~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 227 (263)
.+. ..|+.+|++.+.+++. ++ ++..++|+.+..|... ............. ..+...+.
T Consensus 155 ~~~p~~~~Y~~sK~~~E~~~~~s~~--------~~~ilR~~~v~gp~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i 222 (333)
T 2q1w_A 155 PRNPANSSYAISKSANEDYLEYSGL--------DFVTFRLANVVGPRNV----SGPLPIFFQRLSEGKKCFVTKARRDFV 222 (333)
T ss_dssp CCCCTTCHHHHHHHHHHHHHHHHTC--------CEEEEEESEEESTTCC----SSHHHHHHHHHHTTCCCEEEECEECEE
T ss_pred CCCCCCCchHHHHHHHHHHHHhhhC--------CeEEEeeceEECcCCc----CcHHHHHHHHHHcCCeeeCCCceEeeE
Confidence 233 7899999999999987 54 6778899888876521 0001111111111 12234567
Q ss_pred ChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 228 EPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 228 ~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
+++|+++++++++.... |+.+++++|..++
T Consensus 223 ~v~Dva~ai~~~~~~~~----g~~~~v~~~~~~s 252 (333)
T 2q1w_A 223 FVKDLARATVRAVDGVG----HGAYHFSSGTDVA 252 (333)
T ss_dssp EHHHHHHHHHHHHTTCC----CEEEECSCSCCEE
T ss_pred EHHHHHHHHHHHHhcCC----CCEEEeCCCCCcc
Confidence 89999999999887543 8999999987643
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.1e-24 Score=189.37 Aligned_cols=173 Identities=17% Similarity=0.108 Sum_probs=137.7
Q ss_pred CCEEEEecCCCchHHHHHHHHH-HCCCeEEEeeCCchh---------HHHHHHHHHhcC-----Cc---eEEEeccCCCH
Q 024752 13 GMTALVTGGTKGIGYAVVEELA-AFGAIVHTCSRNETE---------LNQRIQEWKSKG-----LQ---VSGSVCDLKIR 74 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~-~~g~~V~~~~r~~~~---------~~~~~~~~~~~~-----~~---~~~~~~D~~~~ 74 (263)
++++|||||+|+||++++++|+ ++|++|++++|+... .+.+.+.+.... .. +.++.+|++++
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 81 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence 4689999999999999999999 999999999997654 334433333321 23 78899999999
Q ss_pred HHHHHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccc
Q 024752 75 AQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGV 154 (263)
Q Consensus 75 ~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~ 154 (263)
+++.+++++ + +++|+||||||...... +.+++++.+++|+.++.++++++ ++.+.++||++||...+
T Consensus 82 ~~~~~~~~~----~-~~~d~vih~A~~~~~~~----~~~~~~~~~~~Nv~g~~~ll~a~----~~~~~~~iv~~SS~~v~ 148 (397)
T 1gy8_A 82 DFLNGVFTR----H-GPIDAVVHMCAFLAVGE----SVRDPLKYYDNNVVGILRLLQAM----LLHKCDKIIFSSSAAIF 148 (397)
T ss_dssp HHHHHHHHH----S-CCCCEEEECCCCCCHHH----HHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGT
T ss_pred HHHHHHHHh----c-CCCCEEEECCCccCcCc----chhhHHHHHHHHhHHHHHHHHHH----HHhCCCEEEEECCHHHh
Confidence 998887764 3 56999999999754321 45678899999999999999987 44456799999997654
Q ss_pred ccCC------------------CCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcc
Q 024752 155 IAIP------------------MCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLL 201 (263)
Q Consensus 155 ~~~~------------------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~ 201 (263)
.... +...|+.+|++.+.+++.++.++ |++++.++|+.+..+..
T Consensus 149 g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~~v~G~~~ 210 (397)
T 1gy8_A 149 GNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAHE 210 (397)
T ss_dssp BSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCCT
T ss_pred CCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---CCcEEEEeccceeCCCc
Confidence 3221 25689999999999999999887 89999999999988753
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.92 E-value=7.1e-25 Score=188.51 Aligned_cols=209 Identities=14% Similarity=0.114 Sum_probs=153.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
+++|||||+|+||++++++|+++|++|++++|+....+++. . ..+.++.+|+++.+++.+++ ..+|
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~--~~~~~~~~Dl~d~~~~~~~~--------~~~d 79 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLA----Y--LEPECRVAEMLDHAGLERAL--------RGLD 79 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGG----G--GCCEEEECCTTCHHHHHHHT--------TTCS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhc----c--CCeEEEEecCCCHHHHHHHH--------cCCC
Confidence 48999999999999999999999999999999876543221 1 24778899999998887766 3589
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCC--------------
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPM-------------- 159 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~-------------- 159 (263)
+|||+||... .+.+++++.+++|+.++.++++++.+. +.++||++||...+...+.
T Consensus 80 ~vih~a~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~ 149 (342)
T 2x4g_A 80 GVIFSAGYYP------SRPRRWQEEVASALGQTNPFYAACLQA----RVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLP 149 (342)
T ss_dssp EEEEC------------------CHHHHHHHHHHHHHHHHHHH----TCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCC
T ss_pred EEEECCccCc------CCCCCHHHHHHHHHHHHHHHHHHHHHc----CCCeEEEECCHHhhCcCCCCCCCCCCCCCCccc
Confidence 9999999643 134567889999999999999999553 4579999999887654433
Q ss_pred --CcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcc-ccccccchhHHHHHHhHhcCCC------CCCCChh
Q 024752 160 --CSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLL-DTVEKDSNFLEHANRMVLRTPM------LRPGEPN 230 (263)
Q Consensus 160 --~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~-~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 230 (263)
...|+.+|.+.+.+++.++. . |++++.++||.+.++.. ... ...+. .......+. ..+.+++
T Consensus 150 ~~~~~Y~~sK~~~e~~~~~~~~---~-g~~~~ilrp~~v~g~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~i~v~ 220 (342)
T 2x4g_A 150 SGKSSYVLCKWALDEQAREQAR---N-GLPVVIGIPGMVLGELDIGPT--TGRVI---TAIGNGEMTHYVAGQRNVIDAA 220 (342)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHH---T-TCCEEEEEECEEECSCCSSCS--TTHHH---HHHHTTCCCEEECCEEEEEEHH
T ss_pred cccChHHHHHHHHHHHHHHHhh---c-CCcEEEEeCCceECCCCcccc--HHHHH---HHHHcCCCccccCCCcceeeHH
Confidence 66899999999999998875 3 89999999999999865 211 11111 222222111 1256799
Q ss_pred hHHHHHHHHcCCCCCCccCcEEEeCCCc
Q 024752 231 EVSSVVAFLCLSATSYVTGQVICVDGGY 258 (263)
Q Consensus 231 ~va~~~~~l~s~~~~~~~G~~i~~dgG~ 258 (263)
|+++++++++..... |+.+++++|.
T Consensus 221 Dva~~~~~~~~~~~~---g~~~~v~~~~ 245 (342)
T 2x4g_A 221 EAGRGLLMALERGRI---GERYLLTGHN 245 (342)
T ss_dssp HHHHHHHHHHHHSCT---TCEEEECCEE
T ss_pred HHHHHHHHHHhCCCC---CceEEEcCCc
Confidence 999999988865432 8999999986
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=8.9e-25 Score=187.78 Aligned_cols=220 Identities=15% Similarity=0.110 Sum_probs=151.0
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc---CCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK---GLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
.+++|++|||||+|+||++++++|+++|++|+++.|+.+..++... +... ..++.++.+|+++++++.++++
T Consensus 2 ~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---- 76 (337)
T 2c29_D 2 GSQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKH-LLDLPKAETHLTLWKADLADEGSFDEAIK---- 76 (337)
T ss_dssp ----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHH-HHTSTTHHHHEEEEECCTTSTTTTHHHHT----
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHH-HHhcccCCCeEEEEEcCCCCHHHHHHHHc----
Confidence 3578999999999999999999999999999999998764433221 1111 1247888999999988877763
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCC--------
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIP-------- 158 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-------- 158 (263)
.+|+|||+|+... ... .+..++.+++|+.++.++++++.+.. ..++||++||..+..+.+
T Consensus 77 ----~~d~Vih~A~~~~---~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~---~~~riV~~SS~~~~~~~~~~~~~~~E 144 (337)
T 2c29_D 77 ----GCTGVFHVATPMD---FES--KDPENEVIKPTIEGMLGIMKSCAAAK---TVRRLVFTSSAGTVNIQEHQLPVYDE 144 (337)
T ss_dssp ----TCSEEEECCCCCC---SSC--SSHHHHTHHHHHHHHHHHHHHHHHHS---CCCEEEEECCGGGTSCSSSCCSEECT
T ss_pred ----CCCEEEEeccccC---CCC--CChHHHHHHHHHHHHHHHHHHHHhCC---CccEEEEeeeHhhcccCCCCCcccCc
Confidence 5799999998642 111 12235689999999999999986532 257999999987543211
Q ss_pred --------------CCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHH---H---HHhH
Q 024752 159 --------------MCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEH---A---NRMV 218 (263)
Q Consensus 159 --------------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~---~---~~~~ 218 (263)
....|+.||.+.+.+++.++.++ |++++.++|+.|++|....... ...... . ....
T Consensus 145 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~~lrp~~v~Gp~~~~~~~-~~~~~~~~~~~g~~~~~ 220 (337)
T 2c29_D 145 SCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKEN---NIDFITIIPTLVVGPFIMSSMP-PSLITALSPITGNEAHY 220 (337)
T ss_dssp TCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHH---TCCEEEEEECEEESCCSCSSCC-HHHHHHTHHHHTCGGGH
T ss_pred ccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCCCCCC-chHHHHHHHHcCCCccc
Confidence 22369999999999988776554 8999999999999987532211 111000 0 0000
Q ss_pred hcCCCCCCCChhhHHHHHHHHcCCCCCCccCcEE
Q 024752 219 LRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVI 252 (263)
Q Consensus 219 ~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i 252 (263)
...+..++.+++|+++++++++... ..+|..+
T Consensus 221 ~~~~~~~~i~v~Dva~a~~~~~~~~--~~~~~~~ 252 (337)
T 2c29_D 221 SIIRQGQFVHLDDLCNAHIYLFENP--KAEGRYI 252 (337)
T ss_dssp HHHTEEEEEEHHHHHHHHHHHHHCT--TCCEEEE
T ss_pred cccCCCCEEEHHHHHHHHHHHhcCc--ccCceEE
Confidence 0112334788999999999888542 2345543
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=6e-24 Score=185.63 Aligned_cols=230 Identities=15% Similarity=0.014 Sum_probs=161.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchh-----HHHHHHHHHhcCC-ceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-----LNQRIQEWKSKGL-QVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~-----~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
|++|||||+|+||++++++|+++|++|++++|+... ++.+..++...+. .+.++.+|+++.+++.++++.+
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 105 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI--- 105 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc---
Confidence 789999999999999999999999999999998654 2222222211122 6788999999999998888754
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-CCceEEEEcccccccc----------
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-GNGNIIFISSVAGVIA---------- 156 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~~~~---------- 156 (263)
++|+|||+||..... .+.++++..+++|+.++.++++++.+...++ +.++||++||...+..
T Consensus 106 ---~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~ 178 (381)
T 1n7h_A 106 ---KPDEVYNLAAQSHVA----VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTP 178 (381)
T ss_dssp ---CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSC
T ss_pred ---CCCEEEECCcccCcc----ccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCCC
Confidence 689999999975432 2356788999999999999999999876542 3469999999875432
Q ss_pred CCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhc----------CCCCCC
Q 024752 157 IPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLR----------TPMLRP 226 (263)
Q Consensus 157 ~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~ 226 (263)
..+...|+.+|.+.+.+++.++.++ |+.+..+.|..+..|..........+.......... .....+
T Consensus 179 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~ 255 (381)
T 1n7h_A 179 FHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDW 255 (381)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEEC
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeee
Confidence 2345789999999999999998876 666666666665554322111000111111111111 112346
Q ss_pred CChhhHHHHHHHHcCCCCCCccCcEEEeCCCccc
Q 024752 227 GEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 227 ~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
..++|+++++++++.... ++.+++.+|..+
T Consensus 256 v~v~Dva~a~~~~~~~~~----~~~~~i~~~~~~ 285 (381)
T 1n7h_A 256 GFAGDYVEAMWLMLQQEK----PDDYVVATEEGH 285 (381)
T ss_dssp EEHHHHHHHHHHHHTSSS----CCEEEECCSCEE
T ss_pred EEHHHHHHHHHHHHhCCC----CCeEEeeCCCCC
Confidence 779999999998886543 578999988654
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=7.6e-25 Score=188.16 Aligned_cols=220 Identities=15% Similarity=0.104 Sum_probs=160.5
Q ss_pred EEEEecCCCchHHHHHHHHHHC---C---CeEEEeeCCchhH-HHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 15 TALVTGGTKGIGYAVVEELAAF---G---AIVHTCSRNETEL-NQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~---g---~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
++|||||+|+||++++++|+++ | ++|++++|+.... .+...++. .+.++.++.+|+++++++.+++
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~------ 74 (337)
T 1r6d_A 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVD-ADPRLRFVHGDIRDAGLLAREL------ 74 (337)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGT-TCTTEEEEECCTTCHHHHHHHT------
T ss_pred eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcc-cCCCeEEEEcCCCCHHHHHHHh------
Confidence 6999999999999999999997 8 9999999864210 01111111 1346888999999998887765
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccc-----------c
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVI-----------A 156 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-----------~ 156 (263)
.++|+|||+||..... .+.+++++.+++|+.++.++++++.+. +.++||++||...+. +
T Consensus 75 --~~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~~~~~l~~a~~~~----~~~~~v~~SS~~vyg~~~~~~~~E~~~ 144 (337)
T 1r6d_A 75 --RGVDAIVHFAAESHVD----RSIAGASVFTETNVQGTQTLLQCAVDA----GVGRVVHVSTNQVYGSIDSGSWTESSP 144 (337)
T ss_dssp --TTCCEEEECCSCCCHH----HHHHCCHHHHHHHTHHHHHHHHHHHHT----TCCEEEEEEEGGGGCCCSSSCBCTTSC
T ss_pred --cCCCEEEECCCccCch----hhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEecchHHhCCCCCCCCCCCCC
Confidence 4799999999975321 134567889999999999999998553 457999999976542 2
Q ss_pred CCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCC---------CCCCC
Q 024752 157 IPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTP---------MLRPG 227 (263)
Q Consensus 157 ~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~ 227 (263)
..+...|+.+|.+.+.+++.++.++ |++++.++|+.+.++...... .............+ ...+.
T Consensus 145 ~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilrp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i 218 (337)
T 1r6d_A 145 LEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPEK---LIPLFVTNLLDGGTLPLYGDGANVREWV 218 (337)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTS---HHHHHHHHHHTTCCEEEETTSCCEEEEE
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHH---CCCEEEEEeeeeECCCCCCCC---hHHHHHHHHhcCCCcEEeCCCCeeEeeE
Confidence 2345789999999999999998876 899999999999998753211 11111122211111 12355
Q ss_pred ChhhHHHHHHHHcCCCCCCccCcEEEeCCCccc
Q 024752 228 EPNEVSSVVAFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 228 ~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
.++|+++++++++... .+|+.+++++|..+
T Consensus 219 ~v~Dva~a~~~~~~~~---~~g~~~~v~~~~~~ 248 (337)
T 1r6d_A 219 HTDDHCRGIALVLAGG---RAGEIYHIGGGLEL 248 (337)
T ss_dssp EHHHHHHHHHHHHHHC---CTTCEEEECCCCEE
T ss_pred eHHHHHHHHHHHHhCC---CCCCEEEeCCCCCc
Confidence 6899999998887643 26999999998754
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.92 E-value=2e-24 Score=191.52 Aligned_cols=224 Identities=13% Similarity=0.073 Sum_probs=160.5
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCch---hHHHHHHHHHh---------cCCceEEEeccCCCHHHH
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET---ELNQRIQEWKS---------KGLQVSGSVCDLKIRAQR 77 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~---~~~~~~~~~~~---------~~~~~~~~~~D~~~~~~~ 77 (263)
...+|+||||||+|+||++++++|++.|++|++++|+.. ..+.+.+.+.. ...++.++.+|+++++++
T Consensus 66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l 145 (427)
T 4f6c_A 66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV 145 (427)
T ss_dssp CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence 355789999999999999999999999999999999987 33333333322 235789999999998877
Q ss_pred HHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccc--c-
Q 024752 78 EKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAG--V- 154 (263)
Q Consensus 78 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~--~- 154 (263)
. .+ +++|+||||||... ..+++++.+++|+.++.++++++.+ +.+++|++||... .
T Consensus 146 ~--------~~-~~~d~Vih~A~~~~-------~~~~~~~~~~~Nv~g~~~l~~aa~~-----~~~~~v~~SS~~~G~~~ 204 (427)
T 4f6c_A 146 V--------LP-ENMDTIIHAGARTD-------HFGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISVGTYF 204 (427)
T ss_dssp C--------CS-SCCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHH-----TTCEEEEEEEGGGGSEE
T ss_pred C--------Cc-CCCCEEEECCcccC-------CCCCHHHHHHHHHHHHHHHHHHHHh-----cCCcEEEECchHhCCCc
Confidence 7 23 68999999999763 2356788999999999999999855 4579999999877 0
Q ss_pred ---------------ccCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccccc----chhHHHHH
Q 024752 155 ---------------IAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKD----SNFLEHAN 215 (263)
Q Consensus 155 ---------------~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~ 215 (263)
.+..+...|+.+|.+.+.+++.++. .|++++.++||.|.++........ ..+.....
T Consensus 205 ~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~ 280 (427)
T 4f6c_A 205 DIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMN 280 (427)
T ss_dssp CSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHH
T ss_pred cCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHH
Confidence 0122567899999999999998653 589999999999998865443111 11111112
Q ss_pred HhHhc--------CCCCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 216 RMVLR--------TPMLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 216 ~~~~~--------~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
..... .....+.+++|+|+++++++.... .|+.+++++|..++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~---~g~~~~l~~~~~~s 331 (427)
T 4f6c_A 281 DLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNKMP 331 (427)
T ss_dssp HHHHSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSCC---CCSEEEESCSCCEE
T ss_pred HHHhcCCCCCccccceEEEeeHHHHHHHHHHHHcCCC---CCCEEEecCCCCCc
Confidence 22111 112346778999999999887554 79999999987653
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=7.1e-24 Score=184.79 Aligned_cols=229 Identities=13% Similarity=0.006 Sum_probs=160.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchh-----HHHHHHHHHh-cCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-----LNQRIQEWKS-KGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~-----~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
|++|||||+|+||++++++|+++|++|++++|+... ++.+..++.. .+.++.++.+|+++++++.++++.+
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 101 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV--- 101 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc---
Confidence 789999999999999999999999999999998643 2222111110 1245788999999999998888754
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc-----------
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA----------- 156 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~----------- 156 (263)
++|+||||||..... .+.+++++.+++|+.++.++++++.+...+ +.++||++||...+..
T Consensus 102 ---~~d~vih~A~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~-~~~~iv~~SS~~~~~~~~~~~~~E~~~ 173 (375)
T 1t2a_A 102 ---KPTEIYNLGAQSHVK----ISFDLAEYTADVDGVGTLRLLDAVKTCGLI-NSVKFYQASTSELYGKVQEIPQKETTP 173 (375)
T ss_dssp ---CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGTCSCSSSSBCTTSC
T ss_pred ---CCCEEEECCCccccc----ccccCHHHHHHHHHHHHHHHHHHHHHhCCC-ccceEEEecchhhhCCCCCCCCCccCC
Confidence 689999999975322 135678899999999999999999765432 2379999999876542
Q ss_pred CCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcC-C---------CCCC
Q 024752 157 IPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRT-P---------MLRP 226 (263)
Q Consensus 157 ~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~---------~~~~ 226 (263)
..+...|+.+|++.+.+++.++.++ |+.+..+.|+.+..|..........+........... + ...+
T Consensus 174 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~ 250 (375)
T 1t2a_A 174 FYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDW 250 (375)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECC
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeee
Confidence 1235689999999999999998876 7888889998887764322111111111111111111 1 1235
Q ss_pred CChhhHHHHHHHHcCCCCCCccCcEEEeCCCccc
Q 024752 227 GEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 227 ~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
..++|++++++.++.... ++.+++.+|..+
T Consensus 251 i~v~Dva~a~~~~~~~~~----~~~~ni~~~~~~ 280 (375)
T 1t2a_A 251 GHAKDYVEAMWLMLQNDE----PEDFVIATGEVH 280 (375)
T ss_dssp EEHHHHHHHHHHHHHSSS----CCCEEECCSCCE
T ss_pred EEHHHHHHHHHHHHhcCC----CceEEEeCCCcc
Confidence 679999999988775432 467888877654
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-24 Score=184.94 Aligned_cols=224 Identities=14% Similarity=0.055 Sum_probs=171.4
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHH-HCCCeEEEeeCCchh------------HHHHHHHHHhcCCceEEEeccCCCHH
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELA-AFGAIVHTCSRNETE------------LNQRIQEWKSKGLQVSGSVCDLKIRA 75 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~-~~g~~V~~~~r~~~~------------~~~~~~~~~~~~~~~~~~~~D~~~~~ 75 (263)
....+|++||||||+|||++.+..|+ ..|+.|+++.+..+. ...+.+++++.|.++..+.||+++++
T Consensus 46 ~~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e 125 (401)
T 4ggo_A 46 GAKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDE 125 (401)
T ss_dssp TSCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHH
T ss_pred ccCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHH
Confidence 34668999999999999999999999 689999998876532 33456677778999999999999999
Q ss_pred HHHHHHHHHHhhcCCCccEEEeCCCCCCCC-------------CC---------------------CCCCHHHH---HHH
Q 024752 76 QREKLMETVSSQFDGKLNILINNAGTFIPK-------------ET---------------------TEFTEEDF---STV 118 (263)
Q Consensus 76 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~-------------~~---------------------~~~~~~~~---~~~ 118 (263)
+++++++++++++ |++|+||||++..... |+ ...+.+++ .+.
T Consensus 126 ~i~~vi~~i~~~~-G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~v 204 (401)
T 4ggo_A 126 IKAQVIEEAKKKG-IKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKV 204 (401)
T ss_dssp HHHHHHHHHHHTT-CCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-CCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHH
Confidence 9999999999998 8999999999976321 11 11234444 445
Q ss_pred HHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCC--CCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcc
Q 024752 119 MTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIP--MCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVI 196 (263)
Q Consensus 119 ~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~--~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v 196 (263)
|....++.+...+...+.|.+ ++++|.+|+..+....| ..+.++++|++|+..++.|+.++++ +++++++||.+
T Consensus 205 Mg~s~~s~w~~al~~a~lla~--G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~~--~~a~v~v~~a~ 280 (401)
T 4ggo_A 205 MGGEDWERWIKQLSKEGLLEE--GCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENPS--IRAFVSVNKGL 280 (401)
T ss_dssp HSSHHHHHHHHHHHHTTCEEE--EEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCCC
T ss_pred HhhhHHHHHHHHHHhhhcccC--CceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcCC--CcEEEEEcCcc
Confidence 556677777777888788765 68999999988866554 4468999999999999999999975 89999999999
Q ss_pred cCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCC
Q 024752 197 RTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS 242 (263)
Q Consensus 197 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~ 242 (263)
.|+-....+..+.......+. ++..+..|.+.+.+..|..+
T Consensus 281 vT~AssaIP~~ply~~~l~kv-----mk~~g~heg~ieq~~rl~~~ 321 (401)
T 4ggo_A 281 VTRASAVIPVIPLYLASLFKV-----MKEKGNHEGCIEQITRLYAE 321 (401)
T ss_dssp CCTTGGGSSSHHHHHHHHHHH-----HHHHTCCCCHHHHHHHHHHH
T ss_pred ccchhhcCCCchHHHHHHHHH-----HHhcCCCCchHHHHHHHHHH
Confidence 999887776544332221211 12234567777777666653
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=7.3e-24 Score=181.78 Aligned_cols=228 Identities=14% Similarity=0.037 Sum_probs=160.2
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHH-HHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN-QRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
-.+++||||||+|+||++++++|+++|++|++++|+..... ...+.+. ....+.++.+|+++++++.++++.+
T Consensus 12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~----- 85 (335)
T 1rpn_A 12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKA----- 85 (335)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHH-----
T ss_pred ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc-ccCceEEEECCCCCHHHHHHHHHHc-----
Confidence 34789999999999999999999999999999999875421 1111111 1345888999999999998888753
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccccccCC----------
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVIAIP---------- 158 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~---------- 158 (263)
++|+|||+||...... +.+++++.+++|+.++.++++++.+. + .+++|++||...+...+
T Consensus 86 -~~d~Vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~v~~SS~~v~g~~~~~~~~E~~~~ 156 (335)
T 1rpn_A 86 -QPQEVYNLAAQSFVGA----SWNQPVTTGVVDGLGVTHLLEAIRQF----SPETRFYQASTSEMFGLIQAERQDENTPF 156 (335)
T ss_dssp -CCSEEEECCSCCCHHH----HTTSHHHHHHHHTHHHHHHHHHHHHH----CTTSEEEEEEEGGGGCSCSSSSBCTTSCC
T ss_pred -CCCEEEECccccchhh----hhhChHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEeCHHHhCCCCCCCCCcccCC
Confidence 6899999999653211 22456789999999999999998443 3 37999999976653221
Q ss_pred -CCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcC-C---------CCCCC
Q 024752 159 -MCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRT-P---------MLRPG 227 (263)
Q Consensus 159 -~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~---------~~~~~ 227 (263)
+...|+.+|.+.+.+++.++.++ |+++..++|+.+..|..........+........... + ...+.
T Consensus 157 ~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i 233 (335)
T 1rpn_A 157 YPRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWG 233 (335)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECE
T ss_pred CCCChhHHHHHHHHHHHHHHHHHc---CCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceE
Confidence 24579999999999999998776 7889999999998775432111111111111111111 1 11255
Q ss_pred ChhhHHHHHHHHcCCCCCCccCcEEEeCCCccc
Q 024752 228 EPNEVSSVVAFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 228 ~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
.++|++++++.++.... ++.+++.+|..+
T Consensus 234 ~v~Dva~a~~~~~~~~~----~~~~ni~~~~~~ 262 (335)
T 1rpn_A 234 FAGDYVEAMWLMLQQDK----ADDYVVATGVTT 262 (335)
T ss_dssp EHHHHHHHHHHHHHSSS----CCCEEECCSCEE
T ss_pred EHHHHHHHHHHHHhcCC----CCEEEEeCCCCc
Confidence 68999999988876432 478888887654
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.3e-24 Score=186.63 Aligned_cols=225 Identities=16% Similarity=0.128 Sum_probs=165.3
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHC-CCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCC-CHHHHHHHHHHHHhh
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAF-GAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLK-IRAQREKLMETVSSQ 87 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~ 87 (263)
++++|+||||||+|+||++++++|+++ |++|++++|+......... ..++.++.+|++ +.+++.++++
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-----~~~v~~~~~Dl~~d~~~~~~~~~----- 90 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK-----HERMHFFEGDITINKEWVEYHVK----- 90 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG-----STTEEEEECCTTTCHHHHHHHHH-----
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc-----CCCeEEEeCccCCCHHHHHHHhc-----
Confidence 477899999999999999999999998 9999999999866443321 246889999999 9998888775
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC----------
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI---------- 157 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~---------- 157 (263)
++|+|||+|+...... ..++..+.+++|+.++.++++++. +.+ +++|++||...+...
T Consensus 91 ---~~d~Vih~A~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~----~~~-~~~v~~SS~~vyg~~~~~~~~e~~~ 158 (372)
T 3slg_A 91 ---KCDVILPLVAIATPAT----YVKQPLRVFELDFEANLPIVRSAV----KYG-KHLVFPSTSEVYGMCADEQFDPDAS 158 (372)
T ss_dssp ---HCSEEEECBCCCCHHH----HHHCHHHHHHHHTTTTHHHHHHHH----HHT-CEEEEECCGGGGBSCCCSSBCTTTC
T ss_pred ---cCCEEEEcCccccHHH----HhhCHHHHHHHHHHHHHHHHHHHH----HhC-CcEEEeCcHHHhCCCCCCCCCcccc
Confidence 4799999999764322 345677889999999999999883 444 799999996544321
Q ss_pred --------CCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccc----cc-hhHHHHHHhHhcCC--
Q 024752 158 --------PMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEK----DS-NFLEHANRMVLRTP-- 222 (263)
Q Consensus 158 --------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~----~~-~~~~~~~~~~~~~~-- 222 (263)
.+...|+.+|.+.+.+++.++.+ |++++.++|+.+..+....... .. .+...........+
T Consensus 159 ~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (372)
T 3slg_A 159 ALTYGPINKPRWIYACSKQLMDRVIWGYGME----GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENIS 234 (372)
T ss_dssp CEEECCTTCTTHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEE
T ss_pred ccccCCCCCCCCcHHHHHHHHHHHHHHHHHC----CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcE
Confidence 12337999999999999988755 8999999999999886543111 11 11111122222211
Q ss_pred -------CCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCC-Cccc
Q 024752 223 -------MLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDG-GYSV 260 (263)
Q Consensus 223 -------~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dg-G~~~ 260 (263)
...+..++|++++++.++........|+.+++.+ |..+
T Consensus 235 ~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~ 280 (372)
T 3slg_A 235 LVDGGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNF 280 (372)
T ss_dssp EGGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCEE
T ss_pred EeCCCceEEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCCc
Confidence 1245678999999998887554345799999999 5543
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-23 Score=181.31 Aligned_cols=220 Identities=15% Similarity=0.114 Sum_probs=159.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHC-CCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCH-HHHHHHHHHHHhhcCCC
Q 024752 14 MTALVTGGTKGIGYAVVEELAAF-GAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR-AQREKLMETVSSQFDGK 91 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~~ 91 (263)
|++|||||+|+||++++++|+++ |++|++++|+....+... ...++.++.+|+++. +.+.++++ +
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~--------~ 67 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK--------K 67 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHHH--------H
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh-----cCCCeEEEeccccCcHHHHHhhcc--------C
Confidence 47999999999999999999998 899999999887643321 124588899999984 45665553 4
Q ss_pred ccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCC-------------
Q 024752 92 LNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIP------------- 158 (263)
Q Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~------------- 158 (263)
+|+|||+||...+.. ..+++++.+++|+.++.++++++. +.+ +++|++||...+...+
T Consensus 68 ~d~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~ 138 (345)
T 2bll_A 68 CDVVLPLVAIATPIE----YTRNPLRVFELDFEENLRIIRYCV----KYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIV 138 (345)
T ss_dssp CSEEEECBCCCCHHH----HHHSHHHHHHHHTHHHHHHHHHHH----HTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBC
T ss_pred CCEEEEcccccCccc----hhcCHHHHHHHHHHHHHHHHHHHH----HhC-CeEEEEecHHHcCCCCCCCcCCccccccc
Confidence 799999999754321 235677899999999999999884 344 7999999976543211
Q ss_pred -----CCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccc-----ccchhHHHHHHhHhcCC------
Q 024752 159 -----MCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVE-----KDSNFLEHANRMVLRTP------ 222 (263)
Q Consensus 159 -----~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~------ 222 (263)
+...|+.+|.+.+.+++.++.++ |++++.++||.+.++...... ....+...........+
T Consensus 139 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (345)
T 2bll_A 139 GPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDG 215 (345)
T ss_dssp CCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGG
T ss_pred CcccCcccccHHHHHHHHHHHHHHHHhc---CCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECC
Confidence 11279999999999999998776 899999999999988653211 01111111122222211
Q ss_pred ---CCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCc
Q 024752 223 ---MLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGY 258 (263)
Q Consensus 223 ---~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~ 258 (263)
...+.+++|++++++.++.......+|+.+++++|.
T Consensus 216 g~~~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~ 254 (345)
T 2bll_A 216 GKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPE 254 (345)
T ss_dssp SCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTT
T ss_pred CCEEEEEEEHHHHHHHHHHHHhhccccCCCceEEeCCCC
Confidence 123667999999999888654334579999999984
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.7e-24 Score=174.61 Aligned_cols=209 Identities=10% Similarity=0.018 Sum_probs=154.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
|+++||||+|+||++++++|+++|++|++++|++...+.. ...+.++.+|++|++++.++++ .+|
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~--------~~d 69 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE-------NEHLKVKKADVSSLDEVCEVCK--------GAD 69 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC-------CTTEEEECCCTTCHHHHHHHHT--------TCS
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc-------cCceEEEEecCCCHHHHHHHhc--------CCC
Confidence 7899999999999999999999999999999998764322 2468899999999999888773 589
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCC----------CCcch
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIP----------MCSIY 163 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~----------~~~~Y 163 (263)
+|||+||..... .+.+++|+.++.++++++ ++.+.+++|++||.....+.+ +...|
T Consensus 70 ~vi~~a~~~~~~----------~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y 135 (227)
T 3dhn_A 70 AVISAFNPGWNN----------PDIYDETIKVYLTIIDGV----KKAGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENIL 135 (227)
T ss_dssp EEEECCCC----------------CCSHHHHHHHHHHHHH----HHTTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGH
T ss_pred EEEEeCcCCCCC----------hhHHHHHHHHHHHHHHHH----HHhCCCEEEEeCChhhccCCCCCccccCCcchHHHH
Confidence 999999864211 126888999999998887 445567999999987665432 35789
Q ss_pred hhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 164 ASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 164 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
+.+|.+.+.+.+.++. ..|++++.++||++.++............ .... ......+.+++|+|++++.++...
T Consensus 136 ~~sK~~~e~~~~~~~~---~~~~~~~ilrp~~v~g~~~~~~~~~~~~~---~~~~-~~~~~~~i~~~Dva~ai~~~l~~~ 208 (227)
T 3dhn_A 136 PGVKALGEFYLNFLMK---EKEIDWVFFSPAADMRPGVRTGRYRLGKD---DMIV-DIVGNSHISVEDYAAAMIDELEHP 208 (227)
T ss_dssp HHHHHHHHHHHHTGGG---CCSSEEEEEECCSEEESCCCCCCCEEESS---BCCC-CTTSCCEEEHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHhh---ccCccEEEEeCCcccCCCccccceeecCC---Cccc-CCCCCcEEeHHHHHHHHHHHHhCc
Confidence 9999999998887765 45899999999999877543211000000 0000 000133567999999999888644
Q ss_pred CCCccCcEEEeCCCccc
Q 024752 244 TSYVTGQVICVDGGYSV 260 (263)
Q Consensus 244 ~~~~~G~~i~~dgG~~~ 260 (263)
. ..|+.+++.+....
T Consensus 209 ~--~~g~~~~~~~~~~~ 223 (227)
T 3dhn_A 209 K--HHQERFTIGYLEHH 223 (227)
T ss_dssp C--CCSEEEEEECCSCC
T ss_pred c--ccCcEEEEEeehhc
Confidence 3 47999999886543
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.8e-24 Score=182.46 Aligned_cols=218 Identities=17% Similarity=0.099 Sum_probs=145.5
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeC-CchhH---HHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-NETEL---NQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r-~~~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
||++|||||+|+||++++++|+++|++|+++.| +++.. ... .++.....++.++.+|+++++++.++++
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 73 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFL-TNLPGASEKLHFFNADLSNPDSFAAAIE------ 73 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHH-HTSTTHHHHEEECCCCTTCGGGGHHHHT------
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHH-HhhhccCCceEEEecCCCCHHHHHHHHc------
Confidence 689999999999999999999999999999888 65321 111 1110001247788999999998887763
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCH-HHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCC--------
Q 024752 89 DGKLNILINNAGTFIPKETTEFTE-EDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPM-------- 159 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~-------- 159 (263)
.+|+|||+|+.. . .+. +.+++.+++|+.++.++++++.+. .+.++||++||..+..+.+.
T Consensus 74 --~~d~vih~A~~~---~---~~~~~~~~~~~~~nv~gt~~l~~aa~~~---~~~~~iV~~SS~~~~~~~~~~~~~~~e~ 142 (322)
T 2p4h_X 74 --GCVGIFHTASPI---D---FAVSEPEEIVTKRTVDGALGILKACVNS---KTVKRFIYTSSGSAVSFNGKDKDVLDES 142 (322)
T ss_dssp --TCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHTTC---SSCCEEEEEEEGGGTSCSSSCCSEECTT
T ss_pred --CCCEEEEcCCcc---c---CCCCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeccHHHcccCCCCCeecCCc
Confidence 579999999642 1 122 224568999999999999998553 13579999999875432211
Q ss_pred -------------C-cchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHh----cC
Q 024752 160 -------------C-SIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVL----RT 221 (263)
Q Consensus 160 -------------~-~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~----~~ 221 (263)
. ..|+.||.+.+.+++.++.+ .|++++.++||.+.+|+...... ........... ..
T Consensus 143 ~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~g~~~~~~~~--~~~~~~~~~~~g~~~~~ 217 (322)
T 2p4h_X 143 DWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NGIDVVTLILPFIVGRFVCPKLP--DSIEKALVLVLGKKEQI 217 (322)
T ss_dssp CCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TTCCEEEEEECEEESCCCSSSCC--HHHHHHTHHHHSCGGGC
T ss_pred cccchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cCCcEEEEcCCceECCCCCCCCC--chHHHHHHHHhCCCccC
Confidence 1 15999999888877665543 48999999999999987543211 11111101111 11
Q ss_pred CCC--CCCChhhHHHHHHHHcCCCCCCccCcEEEeCC
Q 024752 222 PML--RPGEPNEVSSVVAFLCLSATSYVTGQVICVDG 256 (263)
Q Consensus 222 ~~~--~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dg 256 (263)
+.. .+.+++|+|+++++++... ..+|+ +++.+
T Consensus 218 ~~~~~~~i~v~Dva~a~~~~~~~~--~~~g~-~~~~~ 251 (322)
T 2p4h_X 218 GVTRFHMVHVDDVARAHIYLLENS--VPGGR-YNCSP 251 (322)
T ss_dssp CEEEEEEEEHHHHHHHHHHHHHSC--CCCEE-EECCC
T ss_pred cCCCcCEEEHHHHHHHHHHHhhCc--CCCCC-EEEcC
Confidence 111 3678999999999888643 25676 55543
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.2e-24 Score=221.73 Aligned_cols=178 Identities=19% Similarity=0.206 Sum_probs=143.7
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCe-EEEeeCCchhH---HHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAI-VHTCSRNETEL---NQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~-V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
.+|+++||||++|||+++|+.|+++|++ |++++|+..+. .+..+++...+.++.++.||++++++++++++++.+
T Consensus 1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~- 1961 (2512)
T 2vz8_A 1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQ- 1961 (2512)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHH-
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHh-
Confidence 6899999999999999999999999996 88899986543 455566666678899999999999999999999874
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+ +++|+||||||+....++.+++.++|++.+++|+.|++++.+++.+.|.+ .++||++||.++..+.++...|+++|
T Consensus 1962 ~-g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~--~g~iV~iSS~ag~~g~~g~~~Y~aaK 2038 (2512)
T 2vz8_A 1962 L-GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPE--LDYFVIFSSVSCGRGNAGQANYGFAN 2038 (2512)
T ss_dssp H-SCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTT--CCEEEEECCHHHHTTCTTCHHHHHHH
T ss_pred c-CCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhccc--CCEEEEecchhhcCCCCCcHHHHHHH
Confidence 6 79999999999987788889999999999999999999999999998865 38999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCccc
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIR 197 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~ 197 (263)
+++++|++..+.+ |+...++.+|.+.
T Consensus 2039 aal~~l~~~rr~~----Gl~~~a~~~g~~~ 2064 (2512)
T 2vz8_A 2039 SAMERICEKRRHD----GLPGLAVQWGAIG 2064 (2512)
T ss_dssp HHHHHHHHHHHHT----TSCCCEEEECCBC
T ss_pred HHHHHHHHHHHHC----CCcEEEEEccCcC
Confidence 9999999987655 7888888887664
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.7e-23 Score=178.54 Aligned_cols=230 Identities=15% Similarity=0.080 Sum_probs=155.4
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHh-cCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS-KGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
++|||||+|+||++++++|+++|++|++++|......+..+++.. .+.++.++.+|+++++++.++++. .++|
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~------~~~D 75 (338)
T 1udb_A 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHD------HAID 75 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHH------TTCS
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhc------cCCC
Confidence 699999999999999999999999999988753221112222222 134578889999999998888764 2699
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc-----------C-CCCc
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA-----------I-PMCS 161 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~-~~~~ 161 (263)
+||||||...... ..++..+.+++|+.++.++++++ ++.+.++||++||...+.. . +...
T Consensus 76 ~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~ 147 (338)
T 1udb_A 76 TVIHFAGLKAVGE----SVQKPLEYYDNNVNGTLRLISAM----RAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQS 147 (338)
T ss_dssp EEEECCSCCCHHH----HHHCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSS
T ss_pred EEEECCccCcccc----chhcHHHHHHHHHHHHHHHHHHH----HhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCC
Confidence 9999999753221 23556788999999999999876 4445679999999765421 1 2367
Q ss_pred chhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccc----cc--cchhHHHHHHhHh--cC------------
Q 024752 162 IYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTV----EK--DSNFLEHANRMVL--RT------------ 221 (263)
Q Consensus 162 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~----~~--~~~~~~~~~~~~~--~~------------ 221 (263)
.|+.+|++++.+++.++.++ .|+++..++|+.+..+..... .. ...+......... ..
T Consensus 148 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 225 (338)
T 1udb_A 148 PYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTE 225 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSS
T ss_pred hHHHHHHHHHHHHHHHHHhc--CCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCC
Confidence 89999999999999998874 379999999987765522110 00 1111111111111 00
Q ss_pred ---CCCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCccc
Q 024752 222 ---PMLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 222 ---~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
....+..++|++++++.++........++.+++.+|..+
T Consensus 226 ~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~ 267 (338)
T 1udb_A 226 DGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGN 267 (338)
T ss_dssp SSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCE
T ss_pred CCceeeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCCce
Confidence 011345689999998776542111113478999887643
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3e-24 Score=185.97 Aligned_cols=223 Identities=13% Similarity=0.125 Sum_probs=157.0
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCC-CeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
++++|++|||||+|+||++++++|+++| ++|++++|+..... ...+. .+. +.+|+++++.+.++++. ..+
T Consensus 43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~----~~~-~~~d~~~~~~~~~~~~~--~~~ 113 (357)
T 2x6t_A 43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV----DLN-IADYMDKEDFLIQIMAG--EEF 113 (357)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGTT----TSC-CSEEEEHHHHHHHHHTT--CCC
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhccc----Cce-EeeecCcHHHHHHHHhh--ccc
Confidence 3678999999999999999999999999 89999999865421 01111 122 67899998888777652 123
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCC----------
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIP---------- 158 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~---------- 158 (263)
+++|+|||+||.... +.+++++.+++|+.++.++++++.+ .+. +||++||...+...+
T Consensus 114 -~~~d~Vih~A~~~~~------~~~~~~~~~~~n~~~~~~ll~a~~~----~~~-r~V~~SS~~v~g~~~~~~~~E~~~~ 181 (357)
T 2x6t_A 114 -GDVEAIFHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLE----REI-PFLYASSAATYGGRTSDFIESREYE 181 (357)
T ss_dssp -SSCCEEEECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHH----HTC-CEEEEEEGGGGCSCSSCCCSSGGGC
T ss_pred -CCCCEEEECCcccCC------ccCCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEcchHHhCCCCCCCcCCcCCC
Confidence 579999999997643 2235678999999999999999855 344 999999987654322
Q ss_pred -CCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccccc-chhHHHHHHhHhcC---------C-CCCC
Q 024752 159 -MCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKD-SNFLEHANRMVLRT---------P-MLRP 226 (263)
Q Consensus 159 -~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~---------~-~~~~ 226 (263)
+...|+.+|.+.+.+++.++.++ |++++.++|+.+.++........ ..+........... . ...+
T Consensus 182 ~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (357)
T 2x6t_A 182 KPLNVFGYSKFLFDEYVRQILPEA---NSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDF 258 (357)
T ss_dssp CCSSHHHHHHHHHHHHHHHHGGGC---SSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECE
T ss_pred CCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEcc
Confidence 25689999999999999887653 89999999999998864321111 11111111111111 1 2345
Q ss_pred CChhhHHHHHHHHcCCCCCCccCcEEEeCCCccc
Q 024752 227 GEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 227 ~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
.+++|+|+++++++.... |+.+++++|..+
T Consensus 259 i~v~Dva~ai~~~~~~~~----~~~~~i~~~~~~ 288 (357)
T 2x6t_A 259 VYVGDVADVNLWFLENGV----SGIFNLGTGRAE 288 (357)
T ss_dssp EEHHHHHHHHHHHHHHCC----CEEEEESCSCCE
T ss_pred EEHHHHHHHHHHHHhcCC----CCeEEecCCCcc
Confidence 679999999998886443 889999988654
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.9e-23 Score=179.80 Aligned_cols=227 Identities=16% Similarity=0.159 Sum_probs=158.0
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCC-------CeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFG-------AIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQRE 78 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 78 (263)
+..++++++++|||||+|+||++++++|+++| ++|++++|+...... ....++.++.+|+++++++.
T Consensus 7 ~~~~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~------~~~~~~~~~~~Dl~d~~~~~ 80 (342)
T 2hrz_A 7 RENLYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA------GFSGAVDARAADLSAPGEAE 80 (342)
T ss_dssp CCCSCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT------TCCSEEEEEECCTTSTTHHH
T ss_pred CCCCCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc------ccCCceeEEEcCCCCHHHHH
Confidence 45678899999999999999999999999999 899999998653221 12346888999999999988
Q ss_pred HHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-CCceEEEEccccccccC
Q 024752 79 KLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-GNGNIIFISSVAGVIAI 157 (263)
Q Consensus 79 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~~~~~ 157 (263)
++++ +++|+|||+||.... .+.+++++.+++|+.++.++++++.+...+. +.++||++||...+...
T Consensus 81 ~~~~-------~~~d~vih~A~~~~~-----~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~ 148 (342)
T 2hrz_A 81 KLVE-------ARPDVIFHLAAIVSG-----EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAP 148 (342)
T ss_dssp HHHH-------TCCSEEEECCCCCHH-----HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSS
T ss_pred HHHh-------cCCCEEEECCccCcc-----cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCC
Confidence 8775 479999999997531 2457789999999999999999987654322 24799999998765432
Q ss_pred -C----------CCcchhhHHHHHHHHHHHHHHHHc--cCCcEEEEEe--cCcccCCccccccccchhHHHHHHhHhc--
Q 024752 158 -P----------MCSIYASSKVAMNQLTKNLACEWA--KDKIRVNTVA--PWVIRTPLLDTVEKDSNFLEHANRMVLR-- 220 (263)
Q Consensus 158 -~----------~~~~Y~~sK~a~~~~~~~~a~e~~--~~gi~v~~v~--PG~v~t~~~~~~~~~~~~~~~~~~~~~~-- 220 (263)
+ +...|+.+|++.+.+++.++.++. ...+|++.+. ||.+.++... ............
T Consensus 149 ~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~------~~~~~~~~~~~~~~ 222 (342)
T 2hrz_A 149 LPYPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASG------FFSNILREPLVGQE 222 (342)
T ss_dssp CCSSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGG------HHHHHHHHHHTTCC
T ss_pred CCCCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHH------HHHHHHHHHhcCCC
Confidence 1 457899999999999998877641 1234555554 6654433211 011111111111
Q ss_pred --CCCCC-----CCChhhHHHHHHHHcCCCCC-CccCcEEEeCC
Q 024752 221 --TPMLR-----PGEPNEVSSVVAFLCLSATS-YVTGQVICVDG 256 (263)
Q Consensus 221 --~~~~~-----~~~~~~va~~~~~l~s~~~~-~~~G~~i~~dg 256 (263)
.|... +.+++|++++++.++..... ...++.+++.|
T Consensus 223 ~~~~~~~~~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~g 266 (342)
T 2hrz_A 223 AVLPVPESIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMPG 266 (342)
T ss_dssp EEECSCTTCEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECCC
T ss_pred eeccCCCccceeeEehHHHHHHHHHHHhccccccCCccEEEcCC
Confidence 12211 35789999998877653211 01367888843
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.7e-23 Score=177.84 Aligned_cols=225 Identities=12% Similarity=0.096 Sum_probs=161.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
|+++||||+|+||++++++|+++|++|++++|+.....+ ....++.++.+|+++++++.+++++ .++|
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~D~~~~~~~~~~~~~------~~~d 69 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHED------AITEGAKFYNGDLRDKAFLRDVFTQ------ENIE 69 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG------GSCTTSEEEECCTTCHHHHHHHHHH------SCEE
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchh------hcCCCcEEEECCCCCHHHHHHHHhh------cCCC
Confidence 689999999999999999999999999999987643221 1112578889999999998888764 3799
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC-----------CCCcc
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI-----------PMCSI 162 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----------~~~~~ 162 (263)
+|||+||...... +.+++++.+++|+.++.++++++ ++.+.+++|++||...+... .+...
T Consensus 70 ~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~ 141 (330)
T 2c20_A 70 AVMHFAADSLVGV----SMEKPLQYYNNNVYGALCLLEVM----DEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNT 141 (330)
T ss_dssp EEEECCCCCCHHH----HHHSHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSH
T ss_pred EEEECCcccCccc----cccCHHHHHHHHhHHHHHHHHHH----HHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCCh
Confidence 9999999753321 35678899999999999999987 44456799999997665321 23578
Q ss_pred hhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccc-----ccchhHHHHHHhHh-cCC--------------
Q 024752 163 YASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVE-----KDSNFLEHANRMVL-RTP-------------- 222 (263)
Q Consensus 163 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~~~~~~-~~~-------------- 222 (263)
|+.+|.+.+.+++.++.++ |++++.++|+.+..+...... ....+......... ..+
T Consensus 142 Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g 218 (330)
T 2c20_A 142 YGETKLAIEKMLHWYSQAS---NLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDG 218 (330)
T ss_dssp HHHHHHHHHHHHHHHHHTS---SCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSS
T ss_pred HHHHHHHHHHHHHHHHHHh---CCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCC
Confidence 9999999999999988765 899999999999987532110 01112111111111 110
Q ss_pred --CCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 223 --MLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 223 --~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
...+...+|++++++.++........++.+++.+|..++
T Consensus 219 ~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s 259 (330)
T 2c20_A 219 TCIRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFS 259 (330)
T ss_dssp SCEECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCBC
T ss_pred ceeEeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCcc
Confidence 113456899999988776432111237899998876543
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-22 Score=172.91 Aligned_cols=210 Identities=13% Similarity=0.065 Sum_probs=155.9
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
+|+++||||+|+||++++++|+++|++|++++|++...+ .+ .+.++.+|++ .+++.+++ .++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~-------~~~~~~~Dl~-~~~~~~~~--------~~~ 63 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA--IN-------DYEYRVSDYT-LEDLINQL--------NDV 63 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------------CCEEEECCCC-HHHHHHHT--------TTC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc--CC-------ceEEEEcccc-HHHHHHhh--------cCC
Confidence 378999999999999999999999999999999944332 21 5788999999 88877766 378
Q ss_pred cEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC-----------CCCc
Q 024752 93 NILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI-----------PMCS 161 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----------~~~~ 161 (263)
|+|||+|+..... +.++.+++|+.++.++++++ ++.+.+++|++||...+... .+..
T Consensus 64 d~Vih~a~~~~~~--------~~~~~~~~n~~~~~~ll~a~----~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~ 131 (311)
T 3m2p_A 64 DAVVHLAATRGSQ--------GKISEFHDNEILTQNLYDAC----YENNISNIVYASTISAYSDETSLPWNEKELPLPDL 131 (311)
T ss_dssp SEEEECCCCCCSS--------SCGGGTHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSS
T ss_pred CEEEEccccCCCC--------ChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCc
Confidence 9999999976543 34567889999999999988 44556789999997654321 1346
Q ss_pred chhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCC---------CCCCCChhhH
Q 024752 162 IYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTP---------MLRPGEPNEV 232 (263)
Q Consensus 162 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~v 232 (263)
.|+.+|.+.+.+++.++.+ .|++++.++|+.+..+...... .............+ ...+..++|+
T Consensus 132 ~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dv 205 (311)
T 3m2p_A 132 MYGVSKLACEHIGNIYSRK---KGLCIKNLRFAHLYGFNEKNNY---MINRFFRQAFHGEQLTLHANSVAKREFLYAKDA 205 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHH---SCCEEEEEEECEEECSCC--CC---HHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHH
T ss_pred hhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCceeCcCCCCCC---HHHHHHHHHHcCCCeEEecCCCeEEceEEHHHH
Confidence 7999999999999988775 4899999999999987654321 11111122222211 1234568899
Q ss_pred HHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 233 SSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 233 a~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
+++++.++.... .|+.+++.+|..++
T Consensus 206 a~a~~~~~~~~~---~~~~~~i~~~~~~s 231 (311)
T 3m2p_A 206 AKSVIYALKQEK---VSGTFNIGSGDALT 231 (311)
T ss_dssp HHHHHHHTTCTT---CCEEEEECCSCEEC
T ss_pred HHHHHHHHhcCC---CCCeEEeCCCCccc
Confidence 999998886554 69999999987654
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.9e-23 Score=173.92 Aligned_cols=192 Identities=19% Similarity=0.186 Sum_probs=146.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
|+++||||+|+||++++++|+++|++|++++|++.... ...+.++.+|+++++++.++++ .+|
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~--------~~d 65 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA---------EAHEEIVACDLADAQAVHDLVK--------DCD 65 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC---------CTTEEECCCCTTCHHHHHHHHT--------TCS
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc---------CCCccEEEccCCCHHHHHHHHc--------CCC
Confidence 68999999999999999999999999999999875311 1246888999999988887763 589
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCC------------CCc
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIP------------MCS 161 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~------------~~~ 161 (263)
+||||||... .+++++.+++|+.++.++++++. +.+.++||++||...+...+ +..
T Consensus 66 ~vi~~a~~~~--------~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~ 133 (267)
T 3ay3_A 66 GIIHLGGVSV--------ERPWNDILQANIIGAYNLYEAAR----NLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDS 133 (267)
T ss_dssp EEEECCSCCS--------CCCHHHHHHHTHHHHHHHHHHHH----HTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCS
T ss_pred EEEECCcCCC--------CCCHHHHHHHHHHHHHHHHHHHH----HhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCC
Confidence 9999999752 23467899999999999999984 34567999999987654322 346
Q ss_pred chhhHHHHHHHHHHHHHHHHccCCcEEEEEecCccc-CCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHc
Q 024752 162 IYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIR-TPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC 240 (263)
Q Consensus 162 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~ 240 (263)
.|+.+|++++.+++.++. ..|++++.++||++. ++... .. ...+.+++|+++++..++
T Consensus 134 ~Y~~sK~~~e~~~~~~~~---~~gi~~~~lrp~~v~~~~~~~------------~~------~~~~~~~~dva~~~~~~~ 192 (267)
T 3ay3_A 134 LYGLSKCFGEDLASLYYH---KFDIETLNIRIGSCFPKPKDA------------RM------MATWLSVDDFMRLMKRAF 192 (267)
T ss_dssp HHHHHHHHHHHHHHHHHH---TTCCCEEEEEECBCSSSCCSH------------HH------HHHBCCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHH---HcCCCEEEEeceeecCCCCCC------------Ce------eeccccHHHHHHHHHHHH
Confidence 899999999999998764 358999999999985 33210 00 112467999999998877
Q ss_pred CCCCCCccCcEEEeCCC
Q 024752 241 LSATSYVTGQVICVDGG 257 (263)
Q Consensus 241 s~~~~~~~G~~i~~dgG 257 (263)
.... ..+..+++.++
T Consensus 193 ~~~~--~~~~~~~~~~~ 207 (267)
T 3ay3_A 193 VAPK--LGCTVVYGASA 207 (267)
T ss_dssp HSSC--CCEEEEEECCS
T ss_pred hCCC--CCceeEecCCC
Confidence 6432 12345555443
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.9e-23 Score=177.78 Aligned_cols=213 Identities=14% Similarity=0.114 Sum_probs=128.0
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
+|++|||||+|+||++++++|+++|++|++++|+... . . ++.+|+++++++.++++.. ++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~----------~--~--~~~~Dl~d~~~~~~~~~~~------~~ 61 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR----------P--K--FEQVNLLDSNAVHHIIHDF------QP 61 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------------CHHHHHHH------CC
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC----------C--C--eEEecCCCHHHHHHHHHhh------CC
Confidence 5899999999999999999999999999999987543 0 1 5678999999888887643 68
Q ss_pred cEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc----------CCCCcc
Q 024752 93 NILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA----------IPMCSI 162 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~----------~~~~~~ 162 (263)
|+|||+||..... .+.+++++.+++|+.++.++++++.+ .+ +++|++||...+.+ ..+...
T Consensus 62 d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~v~~~~~~~~~E~~~~~~~~~ 132 (315)
T 2ydy_A 62 HVIVHCAAERRPD----VVENQPDAASQLNVDASGNLAKEAAA----VG-AFLIYISSDYVFDGTNPPYREEDIPAPLNL 132 (315)
T ss_dssp SEEEECC-----------------------CHHHHHHHHHHHH----HT-CEEEEEEEGGGSCSSSCSBCTTSCCCCCSH
T ss_pred CEEEECCcccChh----hhhcCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEchHHHcCCCCCCCCCCCCCCCcCH
Confidence 9999999975432 24577889999999999999999965 23 59999999886544 234578
Q ss_pred hhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccc-cccchhHHHHH-H--h--HhcCCCCCCCChhhHHHHH
Q 024752 163 YASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTV-EKDSNFLEHAN-R--M--VLRTPMLRPGEPNEVSSVV 236 (263)
Q Consensus 163 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~-~--~--~~~~~~~~~~~~~~va~~~ 236 (263)
|+.+|.+.+.+++.++ +.+..++|+.+..+..... .....+..... . . ....+...+.+++|+++++
T Consensus 133 Y~~sK~~~e~~~~~~~-------~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~ 205 (315)
T 2ydy_A 133 YGKTKLDGEKAVLENN-------LGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVC 205 (315)
T ss_dssp HHHHHHHHHHHHHHHC-------TTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhC-------CCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHH
Confidence 9999999999998763 3446677777765543210 00011111111 0 0 0012334567899999999
Q ss_pred HHHcCCC-CCCccCcEEEeCCCcccc
Q 024752 237 AFLCLSA-TSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 237 ~~l~s~~-~~~~~G~~i~~dgG~~~~ 261 (263)
++++... .....|+.+++++|..++
T Consensus 206 ~~~~~~~~~~~~~~~~~~i~~~~~~s 231 (315)
T 2ydy_A 206 RQLAEKRMLDPSIKGTFHWSGNEQMT 231 (315)
T ss_dssp HHHHHHHHTCTTCCEEEECCCSCCBC
T ss_pred HHHHHhhccccCCCCeEEEcCCCccc
Confidence 9887642 122468999999987654
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-22 Score=164.65 Aligned_cols=199 Identities=14% Similarity=0.074 Sum_probs=141.1
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCccE
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNI 94 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 94 (263)
+++||||+|+||++++++|+++|++|++++|++++..++. ...+.++.+|++|+++ +. + ..+|+
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~~~~~~~~~D~~d~~~--~~-------~-~~~d~ 65 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL------GATVATLVKEPLVLTE--AD-------L-DSVDA 65 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT------CTTSEEEECCGGGCCH--HH-------H-TTCSE
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc------CCCceEEecccccccH--hh-------c-ccCCE
Confidence 5999999999999999999999999999999987765432 2457889999999887 21 2 57899
Q ss_pred EEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCC--------------C
Q 024752 95 LINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPM--------------C 160 (263)
Q Consensus 95 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~--------------~ 160 (263)
||||||...... ...+|+.++.++++++ ++.+ +++|++||..+..+.+. .
T Consensus 66 vi~~ag~~~~~~-----------~~~~n~~~~~~l~~a~----~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~ 129 (224)
T 3h2s_A 66 VVDALSVPWGSG-----------RGYLHLDFATHLVSLL----RNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQ 129 (224)
T ss_dssp EEECCCCCTTSS-----------CTHHHHHHHHHHHHTC----TTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGS
T ss_pred EEECCccCCCcc-----------hhhHHHHHHHHHHHHH----HHcC-CcEEEEecceeeccCCCCccccccCCCCCccc
Confidence 999999862211 1345777765555554 6666 99999999877654433 5
Q ss_pred cchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHc
Q 024752 161 SIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC 240 (263)
Q Consensus 161 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~ 240 (263)
..|+.+|.+.+.+. . .....|++++.++||++.++.......... ...........+.+++|+|++++.++
T Consensus 130 ~~y~~sK~~~e~~~-~---~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~-----~~~~~~~~~~~~i~~~DvA~~~~~~l 200 (224)
T 3h2s_A 130 PWYDGALYQYYEYQ-F---LQMNANVNWIGISPSEAFPSGPATSYVAGK-----DTLLVGEDGQSHITTGNMALAILDQL 200 (224)
T ss_dssp TTHHHHHHHHHHHH-H---HTTCTTSCEEEEEECSBCCCCCCCCEEEES-----SBCCCCTTSCCBCCHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHH-H---HHhcCCCcEEEEcCccccCCCcccCceecc-----cccccCCCCCceEeHHHHHHHHHHHh
Confidence 77999999998542 2 223579999999999999873211100000 00000112245688999999999888
Q ss_pred CCCCCCccCcEEEeCC
Q 024752 241 LSATSYVTGQVICVDG 256 (263)
Q Consensus 241 s~~~~~~~G~~i~~dg 256 (263)
.... ..|+.+++.+
T Consensus 201 ~~~~--~~g~~~~~~~ 214 (224)
T 3h2s_A 201 EHPT--AIRDRIVVRD 214 (224)
T ss_dssp HSCC--CTTSEEEEEE
T ss_pred cCcc--ccCCEEEEec
Confidence 6543 4688888754
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.90 E-value=8.9e-23 Score=190.27 Aligned_cols=223 Identities=15% Similarity=0.118 Sum_probs=162.7
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHC-CCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHH-HHHHHHHHHhhc
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAF-GAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQ-REKLMETVSSQF 88 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~ 88 (263)
+++|+++||||+|+||++++++|+++ |++|++++|+....++.. ...++.++.+|+++.++ +.++++
T Consensus 313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~v~~Dl~d~~~~~~~~~~------ 381 (660)
T 1z7e_A 313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK------ 381 (660)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT-----TCTTEEEEECCTTTCHHHHHHHHH------
T ss_pred ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc-----cCCceEEEECCCCCcHHHHHHhhc------
Confidence 57899999999999999999999998 899999999876543221 13468889999998764 554443
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCC----------
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIP---------- 158 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~---------- 158 (263)
++|+|||+||...... ..+++++.+++|+.++.++++++.+ .+ +++|++||...+...+
T Consensus 382 --~~D~Vih~Aa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~aa~~----~~-~r~V~~SS~~vyg~~~~~~~~E~~~~ 450 (660)
T 1z7e_A 382 --KCDVVLPLVAIATPIE----YTRNPLRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSEVYGMCSDKYFDEDHSN 450 (660)
T ss_dssp --HCSEEEECCCCCCTHH----HHHSHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGGGGBTCCSSSBCTTTCC
T ss_pred --CCCEEEECceecCccc----cccCHHHHHHhhhHHHHHHHHHHHH----hC-CEEEEEecHHHcCCCCCcccCCCccc
Confidence 5799999999754321 2456788999999999999998843 44 7999999976653211
Q ss_pred --------CCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccc-----ccchhHHHHHHhHhcCCC--
Q 024752 159 --------MCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVE-----KDSNFLEHANRMVLRTPM-- 223 (263)
Q Consensus 159 --------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~-- 223 (263)
+...|+.+|.+.+.+++.++.++ |++++.++||.+.++...... ................+.
T Consensus 451 ~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 527 (660)
T 1z7e_A 451 LIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKL 527 (660)
T ss_dssp EEECCTTCTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEE
T ss_pred cccCcccCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEE
Confidence 12369999999999999998776 899999999999988653210 011111111222222221
Q ss_pred -------CCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCc
Q 024752 224 -------LRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGY 258 (263)
Q Consensus 224 -------~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~ 258 (263)
..+.+++|+++++++++.......+|+.+++++|.
T Consensus 528 ~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~ 569 (660)
T 1z7e_A 528 IDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPE 569 (660)
T ss_dssp EGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGG
T ss_pred eCCCCeEEEEEEHHHHHHHHHHHHhCccccCCCeEEEECCCC
Confidence 23567999999999888755444679999999985
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.2e-22 Score=161.45 Aligned_cols=204 Identities=14% Similarity=0.110 Sum_probs=134.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
++++||||+|+||++++++|+++|++|++++|++++.+... ..+.++.+|++|+++ +. + ..+|
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-------~~~~~~~~D~~d~~~--~~-------~-~~~d 63 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-------KDINILQKDIFDLTL--SD-------L-SDQN 63 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-------SSSEEEECCGGGCCH--HH-------H-TTCS
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-------CCCeEEeccccChhh--hh-------h-cCCC
Confidence 36999999999999999999999999999999987755432 357889999999887 22 2 5789
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCC------------CCc
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIP------------MCS 161 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~------------~~~ 161 (263)
+||||||.... ...+|+.++..+++++ ++.+.+++|++||..+..+.+ +..
T Consensus 64 ~vi~~ag~~~~-------------~~~~~~~~~~~l~~a~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~ 126 (221)
T 3ew7_A 64 VVVDAYGISPD-------------EAEKHVTSLDHLISVL----NGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAP 126 (221)
T ss_dssp EEEECCCSSTT-------------TTTSHHHHHHHHHHHH----CSCCSSEEEEECCCC-------------------CC
T ss_pred EEEECCcCCcc-------------ccchHHHHHHHHHHHH----HhcCCceEEEEecceEEEcCCCCccccccCCCCCHH
Confidence 99999997421 1344666655555554 666678999999988765433 245
Q ss_pred chhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcC
Q 024752 162 IYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCL 241 (263)
Q Consensus 162 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s 241 (263)
.|+.+|.+.+.+. .+.. ...|++++.++||++.++.... .. +...............+.+++|+|++++.++.
T Consensus 127 ~y~~~k~~~e~~~-~~~~--~~~gi~~~ivrp~~v~g~~~~~-~~---~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~ 199 (221)
T 3ew7_A 127 YYPTARAQAKQLE-HLKS--HQAEFSWTYISPSAMFEPGERT-GD---YQIGKDHLLFGSDGNSFISMEDYAIAVLDEIE 199 (221)
T ss_dssp CSCCHHHHHHHHH-HHHT--TTTTSCEEEEECSSCCCCC-------------------------CCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HHHh--hccCccEEEEeCcceecCCCcc-Cc---eEeccccceecCCCCceEeHHHHHHHHHHHHh
Confidence 6999999998873 2221 1569999999999999872211 00 00000000000112346789999999998876
Q ss_pred CCCCCccCcEEEeCCCccc
Q 024752 242 SATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 242 ~~~~~~~G~~i~~dgG~~~ 260 (263)
... ..|+.+++.+-...
T Consensus 200 ~~~--~~g~~~~~~~~~~~ 216 (221)
T 3ew7_A 200 RPN--HLNEHFTVAGKLEH 216 (221)
T ss_dssp SCS--CTTSEEECCC----
T ss_pred Ccc--ccCCEEEECCCCcc
Confidence 443 46999998876543
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.3e-22 Score=170.77 Aligned_cols=198 Identities=17% Similarity=0.103 Sum_probs=148.8
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
-..+++|||||+|+||++++++|+++|++|++++|+ .+|+++.+++.++++..
T Consensus 10 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------------~~Dl~d~~~~~~~~~~~------ 62 (292)
T 1vl0_A 10 HHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ---------------------DLDITNVLAVNKFFNEK------ 62 (292)
T ss_dssp --CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT---------------------TCCTTCHHHHHHHHHHH------
T ss_pred cccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc---------------------cCCCCCHHHHHHHHHhc------
Confidence 346899999999999999999999999999999996 37999999988887643
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCC-----------C
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIP-----------M 159 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-----------~ 159 (263)
++|+|||+||..... .+.+++++.+++|+.++.++++++.+ .+. ++|++||...+.+.+ +
T Consensus 63 ~~d~vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~l~~a~~~----~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~ 133 (292)
T 1vl0_A 63 KPNVVINCAAHTAVD----KCEEQYDLAYKINAIGPKNLAAAAYS----VGA-EIVQISTDYVFDGEAKEPITEFDEVNP 133 (292)
T ss_dssp CCSEEEECCCCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHH----HTC-EEEEEEEGGGSCSCCSSCBCTTSCCCC
T ss_pred CCCEEEECCccCCHH----HHhcCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEechHHeECCCCCCCCCCCCCCCC
Confidence 689999999975321 23567889999999999999999854 333 999999986654322 3
Q ss_pred CcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcC-------CCCCCCChhhH
Q 024752 160 CSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRT-------PMLRPGEPNEV 232 (263)
Q Consensus 160 ~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~v 232 (263)
...|+.+|.+.+.+++.++. .+..++|+.+..+ ..... ..+. ....... ....+..++|+
T Consensus 134 ~~~Y~~sK~~~E~~~~~~~~-------~~~~lR~~~v~G~-~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~i~v~Dv 200 (292)
T 1vl0_A 134 QSAYGKTKLEGENFVKALNP-------KYYIVRTAWLYGD-GNNFV--KTMI---NLGKTHDELKVVHDQVGTPTSTVDL 200 (292)
T ss_dssp CSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEESS-SSCHH--HHHH---HHHHHCSEEEEESSCEECCEEHHHH
T ss_pred ccHHHHHHHHHHHHHHhhCC-------CeEEEeeeeeeCC-CcChH--HHHH---HHHhcCCcEEeecCeeeCCccHHHH
Confidence 56799999999999987642 4788999999876 21111 1111 1111111 22456679999
Q ss_pred HHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 233 SSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 233 a~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
++++++++... +|+.+++++|..++
T Consensus 201 a~~~~~~~~~~----~~~~~~i~~~~~~s 225 (292)
T 1vl0_A 201 ARVVLKVIDEK----NYGTFHCTCKGICS 225 (292)
T ss_dssp HHHHHHHHHHT----CCEEEECCCBSCEE
T ss_pred HHHHHHHHhcC----CCcEEEecCCCCcc
Confidence 99999888654 58999999986543
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.6e-23 Score=180.00 Aligned_cols=220 Identities=16% Similarity=0.093 Sum_probs=145.7
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHH--HHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR--IQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
+|++|||||+|+||++++++|+++|++|+++.|+.+..+.. ..++. ...++.++.+|+++++++.++++
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~-------- 79 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-ELGDLKIFRADLTDELSFEAPIA-------- 79 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-GGSCEEEEECCTTTSSSSHHHHT--------
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-CCCcEEEEecCCCChHHHHHHHc--------
Confidence 78999999999999999999999999999989886542211 11222 22457888999999888777663
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC-------------
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI------------- 157 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~------------- 157 (263)
.+|+|||+|+..... ..+..++.+++|+.++.++++++.+.. +.++||++||..+..+.
T Consensus 80 ~~D~Vih~A~~~~~~-----~~~~~~~~~~~nv~gt~~ll~aa~~~~---~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~ 151 (338)
T 2rh8_A 80 GCDFVFHVATPVHFA-----SEDPENDMIKPAIQGVVNVMKACTRAK---SVKRVILTSSAAAVTINQLDGTGLVVDEKN 151 (338)
T ss_dssp TCSEEEEESSCCCC--------------CHHHHHHHHHHHHHHHHCT---TCCEEEEECCHHHHHHHHHTCSCCCCCTTT
T ss_pred CCCEEEEeCCccCCC-----CCCcHHHHHHHHHHHHHHHHHHHHHcC---CcCEEEEEecHHHeecCCcCCCCcccChhh
Confidence 579999999864211 112234589999999999999985432 25799999997632110
Q ss_pred --------C---CCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHH---H----HHhH-
Q 024752 158 --------P---MCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEH---A----NRMV- 218 (263)
Q Consensus 158 --------~---~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~---~----~~~~- 218 (263)
+ ....|+.||.+.+.+++.++.++ |++++.++|+.|++|........ ..... . ..+.
T Consensus 152 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~~lrp~~v~Gp~~~~~~~~-~~~~~~~~~~g~~~~~~~ 227 (338)
T 2rh8_A 152 WTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEEN---NIDLITVIPTLMAGSSLTSDVPS-SIGLAMSLITGNEFLING 227 (338)
T ss_dssp TTCC-------CCCCCCTTSCCHHHHHHHHHHHHH---TCCEEEEEECEEESCCSSSSCCH-HHHHHHHHHHTCHHHHHH
T ss_pred ccchhhccccCCccchHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCCCCCCc-hHHHHHHHHcCCcccccc
Confidence 0 11159999999999888776554 89999999999999875432110 00000 0 0000
Q ss_pred -hc----CCCCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCC
Q 024752 219 -LR----TPMLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDG 256 (263)
Q Consensus 219 -~~----~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dg 256 (263)
.. .....+.+++|+++++++++... ..+|. +++.+
T Consensus 228 ~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~--~~~~~-~~~~~ 267 (338)
T 2rh8_A 228 MKGMQMLSGSVSIAHVEDVCRAHIFVAEKE--SASGR-YICCA 267 (338)
T ss_dssp HHHHHHHHSSEEEEEHHHHHHHHHHHHHCT--TCCEE-EEECS
T ss_pred ccccccccCcccEEEHHHHHHHHHHHHcCC--CcCCc-EEEec
Confidence 00 00114678999999999888543 23455 44443
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.9e-22 Score=171.15 Aligned_cols=218 Identities=13% Similarity=0.059 Sum_probs=156.8
Q ss_pred CCEEEEecCCCchHHHHHHHHHHC--CCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAF--GAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
+|+++||||+|+||++++++|+++ |++|++++|+....+ . .. .+.++.+|+++.+++.+++++ .
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~----~~---~~~~~~~D~~d~~~~~~~~~~------~ 67 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-V----VN---SGPFEVVNALDFNQIEHLVEV------H 67 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-H----HH---SSCEEECCTTCHHHHHHHHHH------T
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-c----cC---CCceEEecCCCHHHHHHHHhh------c
Confidence 478999999999999999999999 899999999876522 1 11 356789999999998888764 2
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC------------C
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI------------P 158 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~------------~ 158 (263)
++|+|||+||..... ..+++++.+++|+.++.++++++. +.+.+++|++||...+... .
T Consensus 68 ~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~ 138 (312)
T 2yy7_A 68 KITDIYLMAALLSAT-----AEKNPAFAWDLNMNSLFHVLNLAK----AKKIKKIFWPSSIAVFGPTTPKENTPQYTIME 138 (312)
T ss_dssp TCCEEEECCCCCHHH-----HHHCHHHHHHHHHHHHHHHHHHHH----TTSCSEEECCEEGGGCCTTSCSSSBCSSCBCC
T ss_pred CCCEEEECCccCCCc-----hhhChHHHHHHHHHHHHHHHHHHH----HcCCCEEEEeccHHHhCCCCCCCCccccCcCC
Confidence 689999999964321 235678899999999999999984 3445799999998765331 2
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccccc-chhHHHHHH-hHhc-C-------CCCCCCC
Q 024752 159 MCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKD-SNFLEHANR-MVLR-T-------PMLRPGE 228 (263)
Q Consensus 159 ~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~-~~~~-~-------~~~~~~~ 228 (263)
+...|+.+|.+.+.+++.++.++ |++++.++|+.+..+........ ......... .... . ....+..
T Consensus 139 ~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 215 (312)
T 2yy7_A 139 PSTVYGISKQAGERWCEYYHNIY---GVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMY 215 (312)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHH---CCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEE
T ss_pred CCchhHHHHHHHHHHHHHHHHhc---CCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeee
Confidence 35679999999999999988776 89999999999998653221110 111111111 1111 0 1122456
Q ss_pred hhhHHHHHHHHcCCCCCCc-cCcEEEeCC
Q 024752 229 PNEVSSVVAFLCLSATSYV-TGQVICVDG 256 (263)
Q Consensus 229 ~~~va~~~~~l~s~~~~~~-~G~~i~~dg 256 (263)
++|++++++.++....... .|+.+++.+
T Consensus 216 v~Dva~a~~~~~~~~~~~~~~~~~~ni~~ 244 (312)
T 2yy7_A 216 MDDAIDATINIMKAPVEKIKIHSSYNLAA 244 (312)
T ss_dssp HHHHHHHHHHHHHSCGGGCCCSSCEECCS
T ss_pred HHHHHHHHHHHHhCcccccccCceEEeCC
Confidence 8999999988775443222 258899875
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=2.7e-22 Score=170.02 Aligned_cols=219 Identities=13% Similarity=0.123 Sum_probs=153.5
Q ss_pred EEEEecCCCchHHHHHHHHHHCC-CeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 15 TALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
++|||||+|+||++++++|+++| ++|++++|+..... ...+.. +. +.+|+++.+.+.++++... + +++|
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~~----~~-~~~d~~~~~~~~~~~~~~~--~-~~~d 70 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLVD----LN-IADYMDKEDFLIQIMAGEE--F-GDVE 70 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHHT----SC-CSEEEEHHHHHHHHHTTCC--C-SSCC
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcCc----ce-eccccccHHHHHHHHhccc--c-CCCc
Confidence 48999999999999999999999 89999999875421 111211 12 6789998888777664110 1 3799
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCC-----------CCcc
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIP-----------MCSI 162 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-----------~~~~ 162 (263)
+|||+||.... +.+++++.+++|+.++.++++++.+ .+. ++|++||...+...+ +...
T Consensus 71 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~a~~~----~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~ 139 (310)
T 1eq2_A 71 AIFHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLE----REI-PFLYASSAATYGGRTSDFIESREYEKPLNV 139 (310)
T ss_dssp EEEECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHH----HTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSH
T ss_pred EEEECcccccC------cccCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCCh
Confidence 99999997643 2234678899999999999999844 345 999999986543221 2457
Q ss_pred hhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccch-hHHHHHHhHh---------cCC-CCCCCChhh
Q 024752 163 YASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSN-FLEHANRMVL---------RTP-MLRPGEPNE 231 (263)
Q Consensus 163 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~-~~~~~~~~~~---------~~~-~~~~~~~~~ 231 (263)
|+.+|.+.+.+++.++.+ .|++++.++||.+.++.......... .......... ... ...+.+++|
T Consensus 140 Y~~sK~~~e~~~~~~~~~---~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~D 216 (310)
T 1eq2_A 140 YGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGD 216 (310)
T ss_dssp HHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHH
T ss_pred hHHHHHHHHHHHHHHHHH---cCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHH
Confidence 999999999999988765 48999999999999886542111111 1111111111 111 334567899
Q ss_pred HHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 232 VSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 232 va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
++++++.++.... |+.+++.+|..++
T Consensus 217 va~~~~~~~~~~~----~~~~~i~~~~~~s 242 (310)
T 1eq2_A 217 VADVNLWFLENGV----SGIFNLGTGRAES 242 (310)
T ss_dssp HHHHHHHHHHHCC----CEEEEESCSCCBC
T ss_pred HHHHHHHHHhcCC----CCeEEEeCCCccC
Confidence 9999988876433 8899999887554
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.6e-22 Score=174.13 Aligned_cols=220 Identities=12% Similarity=0.073 Sum_probs=152.7
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
++++|++|||||+|+||++++++|+++|++|++++|+.....+....+. ...++.++.+|+++.. +
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~- 89 (343)
T 2b69_A 24 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI-GHENFELINHDVVEPL------------Y- 89 (343)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT-TCTTEEEEECCTTSCC------------C-
T ss_pred ccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhc-cCCceEEEeCccCChh------------h-
Confidence 4678999999999999999999999999999999997543211111111 1345788899998742 3
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccc--------------
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVI-------------- 155 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-------------- 155 (263)
.++|+|||+||...... ..+++++.+++|+.++.++++++.+ .+ .++|++||...+.
T Consensus 90 ~~~d~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~v~g~~~~~~~~E~~~~~ 160 (343)
T 2b69_A 90 IEVDQIYHLASPASPPN----YMYNPIKTLKTNTIGTLNMLGLAKR----VG-ARLLLASTSEVYGDPEVHPQSEDYWGH 160 (343)
T ss_dssp CCCSEEEECCSCCSHHH----HTTCHHHHHHHHHHHHHHHHHHHHH----HT-CEEEEEEEGGGGBSCSSSSBCTTCCCB
T ss_pred cCCCEEEECccccCchh----hhhCHHHHHHHHHHHHHHHHHHHHH----hC-CcEEEECcHHHhCCCCCCCCccccccc
Confidence 57999999999754321 1134567899999999999999844 23 4999999976542
Q ss_pred --cCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCC---------CC
Q 024752 156 --AIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTP---------ML 224 (263)
Q Consensus 156 --~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 224 (263)
+..+...|+.+|.+.+.+++.++.++ |++++.++||.+.++...... ...............+ ..
T Consensus 161 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (343)
T 2b69_A 161 VNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMND-GRVVSNFILQALQGEPLTVYGSGSQTR 236 (343)
T ss_dssp CCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTC-CCHHHHHHHHHHHTCCEEEESSSCCEE
T ss_pred CCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEEcceeCcCCCCCc-ccHHHHHHHHHHcCCCceEcCCCCeEE
Confidence 12234569999999999999988775 899999999999988643211 0111111122211111 12
Q ss_pred CCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCccc
Q 024752 225 RPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 225 ~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
.+..++|++++++.++... .++.+++.+|..+
T Consensus 237 ~~v~v~Dva~a~~~~~~~~----~~~~~~i~~~~~~ 268 (343)
T 2b69_A 237 AFQYVSDLVNGLVALMNSN----VSSPVNLGNPEEH 268 (343)
T ss_dssp ECEEHHHHHHHHHHHHTSS----CCSCEEESCCCEE
T ss_pred eeEeHHHHHHHHHHHHhcC----CCCeEEecCCCCC
Confidence 3567999999998887643 2678999888654
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.3e-21 Score=175.91 Aligned_cols=229 Identities=16% Similarity=0.074 Sum_probs=160.1
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHC---CCeEEEeeCCchhHHHHHHHHHh----------------cCCceEEE
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAF---GAIVHTCSRNETELNQRIQEWKS----------------KGLQVSGS 67 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~---g~~V~~~~r~~~~~~~~~~~~~~----------------~~~~~~~~ 67 (263)
...+.++|+||||||+|+||++++++|+++ |++|++++|+........ .+.+ ...++.++
T Consensus 67 ~~~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~v~~v 145 (478)
T 4dqv_A 67 PGPSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARR-RLEKTFDSGDPELLRHFKELAADRLEVV 145 (478)
T ss_dssp CCCCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHH-HHHGGGCSSCHHHHHHHHHHHTTTEEEE
T ss_pred CCCCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHH-HHHHHHHhcchhhhhhhhhhccCceEEE
Confidence 345678999999999999999999999999 999999999876543222 1111 23578999
Q ss_pred eccCC------CHHHHHHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC
Q 024752 68 VCDLK------IRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG 141 (263)
Q Consensus 68 ~~D~~------~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 141 (263)
.+|++ +.+++.++++ ++|+||||||.... +.+++.+++|+.++.++++++ .+.+
T Consensus 146 ~~Dl~~~~~gld~~~~~~~~~--------~~D~Vih~Aa~~~~--------~~~~~~~~~Nv~gt~~ll~aa----~~~~ 205 (478)
T 4dqv_A 146 AGDKSEPDLGLDQPMWRRLAE--------TVDLIVDSAAMVNA--------FPYHELFGPNVAGTAELIRIA----LTTK 205 (478)
T ss_dssp ECCTTSGGGGCCHHHHHHHHH--------HCCEEEECCSSCSB--------SSCCEEHHHHHHHHHHHHHHH----TSSS
T ss_pred EeECCCcccCCCHHHHHHHHc--------CCCEEEECccccCC--------cCHHHHHHHHHHHHHHHHHHH----HhCC
Confidence 99999 5556666553 58999999998654 234567899999999999988 3444
Q ss_pred CceEEEEccccccccCCC----------------------CcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCC
Q 024752 142 NGNIIFISSVAGVIAIPM----------------------CSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTP 199 (263)
Q Consensus 142 ~~~iv~vsS~~~~~~~~~----------------------~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~ 199 (263)
.+++|++||...+..... ...|+.+|.+.+.+++.++.+. |++++.++||.|..+
T Consensus 206 ~~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ivRpg~v~G~ 282 (478)
T 4dqv_A 206 LKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---ALPVAVFRCGMILAD 282 (478)
T ss_dssp CCCEEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECC
T ss_pred CCeEEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---CCCeEEEECceeeCC
Confidence 579999999765432111 1349999999999999988765 899999999999876
Q ss_pred cc-ccc-cccchhHHHHHHhHh--cCC---------------CCCCCChhhHHHHHHHHcCCC--CCCccCcEEEeCCCc
Q 024752 200 LL-DTV-EKDSNFLEHANRMVL--RTP---------------MLRPGEPNEVSSVVAFLCLSA--TSYVTGQVICVDGGY 258 (263)
Q Consensus 200 ~~-~~~-~~~~~~~~~~~~~~~--~~~---------------~~~~~~~~~va~~~~~l~s~~--~~~~~G~~i~~dgG~ 258 (263)
.. ... .....+......... ..| ...+.+.+|++++++.++... ...-.|+.+++.++.
T Consensus 283 ~~~~g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~ 362 (478)
T 4dqv_A 283 TSYAGQLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPH 362 (478)
T ss_dssp SSSSSCCCTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCC
T ss_pred CccCCcCCHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCC
Confidence 32 111 111111111111111 111 123466899999998876531 122358899998876
Q ss_pred c
Q 024752 259 S 259 (263)
Q Consensus 259 ~ 259 (263)
.
T Consensus 363 ~ 363 (478)
T 4dqv_A 363 D 363 (478)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=6.4e-24 Score=170.86 Aligned_cols=198 Identities=13% Similarity=0.093 Sum_probs=147.3
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
.+|+++||||+|+||++++++|+++|+ +|++++|++.. ...++.++.+|+++++++.+++
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~~~~~~~~~~D~~~~~~~~~~~-------- 65 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------EHPRLDNPVGPLAELLPQLDGS-------- 65 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------CCTTEECCBSCHHHHGGGCCSC--------
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------cCCCceEEeccccCHHHHHHhh--------
Confidence 468999999999999999999999998 99999998765 1245778889998776554432
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
+|++|||||.... +.+++++.+++|+.++.++++++. +.+.+++|++||...... +...|+.+|.+
T Consensus 66 --~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~--~~~~y~~sK~~ 131 (215)
T 2a35_A 66 --IDTAFCCLGTTIK------EAGSEEAFRAVDFDLPLAVGKRAL----EMGARHYLVVSALGADAK--SSIFYNRVKGE 131 (215)
T ss_dssp --CSEEEECCCCCHH------HHSSHHHHHHHHTHHHHHHHHHHH----HTTCCEEEEECCTTCCTT--CSSHHHHHHHH
T ss_pred --hcEEEECeeeccc------cCCCHHHHHHhhHHHHHHHHHHHH----HcCCCEEEEECCcccCCC--CccHHHHHHHH
Confidence 8999999996432 235678899999999999999874 445679999999876643 35689999999
Q ss_pred HHHHHHHHHHHHccCCcE-EEEEecCcccCCccccccccchhHHHHHHhHhcCCC----CCCCChhhHHHHHHHHcCCCC
Q 024752 170 MNQLTKNLACEWAKDKIR-VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPM----LRPGEPNEVSSVVAFLCLSAT 244 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~-v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~va~~~~~l~s~~~ 244 (263)
++.+++. .|++ ++.++||++.++........ .+. ....|. ..+.+++|++++++.++....
T Consensus 132 ~e~~~~~-------~~~~~~~~vrp~~v~g~~~~~~~~~-~~~------~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~ 197 (215)
T 2a35_A 132 LEQALQE-------QGWPQLTIARPSLLFGPREEFRLAE-ILA------APIARILPGKYHGIEACDLARALWRLALEEG 197 (215)
T ss_dssp HHHHHTT-------SCCSEEEEEECCSEESTTSCEEGGG-GTT------CCCC----CHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHH-------cCCCeEEEEeCceeeCCCCcchHHH-HHH------HhhhhccCCCcCcEeHHHHHHHHHHHHhcCC
Confidence 9998874 3898 99999999998864311000 000 000111 123568999999998886543
Q ss_pred CCccCcEEEeCCCcc
Q 024752 245 SYVTGQVICVDGGYS 259 (263)
Q Consensus 245 ~~~~G~~i~~dgG~~ 259 (263)
++.+++.++..
T Consensus 198 ----~~~~~i~~~~~ 208 (215)
T 2a35_A 198 ----KGVRFVESDEL 208 (215)
T ss_dssp ----SEEEEEEHHHH
T ss_pred ----CCceEEcHHHH
Confidence 77888877643
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=5.8e-22 Score=168.93 Aligned_cols=213 Identities=13% Similarity=0.102 Sum_probs=153.8
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
++|+++||||+|+||++++++|+++|++|++++|+. .+|+++.+++.++++.. +
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~--------------------~~D~~d~~~~~~~~~~~------~ 55 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------------ELNLLDSRAVHDFFASE------R 55 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------------TCCTTCHHHHHHHHHHH------C
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc--------------------cCCccCHHHHHHHHHhc------C
Confidence 468999999999999999999999999999988863 27999999988887643 6
Q ss_pred ccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC-------------C
Q 024752 92 LNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI-------------P 158 (263)
Q Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-------------~ 158 (263)
+|+|||+|+..... ....++.++.+++|+.++.++++++. +.+.+++|++||...+... +
T Consensus 56 ~d~vih~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~ 128 (321)
T 1e6u_A 56 IDQVYLAAAKVGGI---VANNTYPADFIYQNMMIESNIIHAAH----QNDVNKLLFLGSSCIYPKLAKQPMAESELLQGT 128 (321)
T ss_dssp CSEEEECCCCCCCH---HHHHHCHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSC
T ss_pred CCEEEEcCeecCCc---chhhhCHHHHHHHHHHHHHHHHHHHH----HhCCCeEEEEccHHHcCCCCCCCcCccccccCC
Confidence 89999999965321 11345678899999999999999884 3445799999998765211 1
Q ss_pred C---CcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchh-HHHHHHhHh-------cC------
Q 024752 159 M---CSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNF-LEHANRMVL-------RT------ 221 (263)
Q Consensus 159 ~---~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~-~~~~~~~~~-------~~------ 221 (263)
. ...|+.+|.+.+.+++.++.++ |++++.++|+.+..+..........+ ......... ..
T Consensus 129 ~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g 205 (321)
T 1e6u_A 129 LEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSG 205 (321)
T ss_dssp CCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCS
T ss_pred CCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCC
Confidence 1 2489999999999999988776 89999999999998765421111111 111111110 11
Q ss_pred -CCCCCCChhhHHHHHHHHcCCCCC------CccCcEEEeCCCccc
Q 024752 222 -PMLRPGEPNEVSSVVAFLCLSATS------YVTGQVICVDGGYSV 260 (263)
Q Consensus 222 -~~~~~~~~~~va~~~~~l~s~~~~------~~~G~~i~~dgG~~~ 260 (263)
....+...+|++++++.++..... ...|+.+++.+|..+
T Consensus 206 ~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~ 251 (321)
T 1e6u_A 206 TPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDC 251 (321)
T ss_dssp CCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCE
T ss_pred CEEEEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCCc
Confidence 112345789999999887754321 124789999887654
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=9.6e-22 Score=184.46 Aligned_cols=239 Identities=15% Similarity=0.055 Sum_probs=160.9
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHh-cCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS-KGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
..+++++|+||||||+|+||++++++|+++|++|++++|+.....+...++.. .+..+.++.+|+++++++.++++.
T Consensus 5 ~~~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~-- 82 (699)
T 1z45_A 5 LQSESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKE-- 82 (699)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHH--
T ss_pred cccccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHh--
Confidence 45678899999999999999999999999999999999876543222222221 134577889999999998888764
Q ss_pred hhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc---------
Q 024752 86 SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA--------- 156 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~--------- 156 (263)
.++|+|||+||...... ..+...+.+++|+.++.++++++ ++.+.++||++||...+..
T Consensus 83 ----~~~D~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~~iV~~SS~~vyg~~~~~~~~~~ 150 (699)
T 1z45_A 83 ----YKIDSVIHFAGLKAVGE----STQIPLRYYHNNILGTVVLLELM----QQYNVSKFVFSSSATVYGDATRFPNMIP 150 (699)
T ss_dssp ----SCCCEEEECCSCCCHHH----HHHSHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCCGGGSTTCCS
T ss_pred ----CCCCEEEECCcccCcCc----cccCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEECcHHHhCCCccccccCC
Confidence 26899999999754321 22345678999999999998876 4445679999999765421
Q ss_pred ------CCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccc------cchhHHHHHHhHh--cCC
Q 024752 157 ------IPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEK------DSNFLEHANRMVL--RTP 222 (263)
Q Consensus 157 ------~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~------~~~~~~~~~~~~~--~~~ 222 (263)
..+...|+.+|++++.+++.++.+. +.|+++..++|+.+..+....... ...+......... ..+
T Consensus 151 ~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 229 (699)
T 1z45_A 151 IPEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREK 229 (699)
T ss_dssp BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSC
T ss_pred ccccCCCCCCChHHHHHHHHHHHHHHHHHhc-cCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCc
Confidence 1134679999999999999988775 358999999999988764321110 0111111111111 011
Q ss_pred C---------------CCCCChhhHHHHHHHHcCCC----CCCccCcEEEeCCCccc
Q 024752 223 M---------------LRPGEPNEVSSVVAFLCLSA----TSYVTGQVICVDGGYSV 260 (263)
Q Consensus 223 ~---------------~~~~~~~~va~~~~~l~s~~----~~~~~G~~i~~dgG~~~ 260 (263)
. ..+...+|+|++++.++... ...-.|+.+++.+|..+
T Consensus 230 ~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~ 286 (699)
T 1z45_A 230 LYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGS 286 (699)
T ss_dssp CCCC------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCE
T ss_pred eEEeCCcccCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCC
Confidence 1 12355899999987765311 11123678999888654
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-21 Score=166.53 Aligned_cols=214 Identities=15% Similarity=0.100 Sum_probs=152.0
Q ss_pred EEEEecCCCchHHHHHHHHHHC--CCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 15 TALVTGGTKGIGYAVVEELAAF--GAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
++|||||+|+||++++++|+++ |++|++++|+....+ .+.++.+|+++++++.+++++ .++
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----------~~~~~~~D~~d~~~~~~~~~~------~~~ 63 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-----------GIKFITLDVSNRDEIDRAVEK------YSI 63 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-----------TCCEEECCTTCHHHHHHHHHH------TTC
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-----------CceEEEecCCCHHHHHHHHhh------cCC
Confidence 4899999999999999999998 899999998765421 356788999999998888764 369
Q ss_pred cEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC------------CCC
Q 024752 93 NILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI------------PMC 160 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~------------~~~ 160 (263)
|+|||+|+.... ...+++++.+++|+.++.++++++. +.+.+++|++||...+... .+.
T Consensus 64 d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~ 134 (317)
T 3ajr_A 64 DAIFHLAGILSA-----KGEKDPALAYKVNMNGTYNILEAAK----QHRVEKVVIPSTIGVFGPETPKNKVPSITITRPR 134 (317)
T ss_dssp CEEEECCCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCC
T ss_pred cEEEECCcccCC-----ccccChHHHhhhhhHHHHHHHHHHH----HcCCCEEEEecCHHHhCCCCCCCCccccccCCCC
Confidence 999999997432 1245678899999999999999884 3455799999998765432 135
Q ss_pred cchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccc-ccchhHHHHHHhHhcCC---------CCCCCChh
Q 024752 161 SIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVE-KDSNFLEHANRMVLRTP---------MLRPGEPN 230 (263)
Q Consensus 161 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~---------~~~~~~~~ 230 (263)
..|+.+|.+.+.+++.++.++ |++++.++|+.+..+...... ...............-+ ...+...+
T Consensus 135 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 211 (317)
T 3ajr_A 135 TMFGVTKIAAELLGQYYYEKF---GLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMP 211 (317)
T ss_dssp SHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHH
T ss_pred chHHHHHHHHHHHHHHHHHhc---CCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHH
Confidence 689999999999999887765 899999998777654321110 00111111111111100 11234589
Q ss_pred hHHHHHHHHcCCC-CCCccCcEEEeCCC
Q 024752 231 EVSSVVAFLCLSA-TSYVTGQVICVDGG 257 (263)
Q Consensus 231 ~va~~~~~l~s~~-~~~~~G~~i~~dgG 257 (263)
|++++++.++... ....+|+.+++.|+
T Consensus 212 Dva~a~~~~l~~~~~~~~~g~~~~i~~~ 239 (317)
T 3ajr_A 212 DALKALVDLYEADRDKLVLRNGYNVTAY 239 (317)
T ss_dssp HHHHHHHHHHHCCGGGCSSCSCEECCSE
T ss_pred HHHHHHHHHHhCCccccccCceEecCCc
Confidence 9999988766433 22345789999864
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.87 E-value=2e-21 Score=164.70 Aligned_cols=219 Identities=15% Similarity=0.047 Sum_probs=153.0
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
+++++|+||||||+|+||++++++|+++|+ +... ....+..+.+|+++++++.++++.
T Consensus 2 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~-----------~~~~~~~~~~D~~d~~~~~~~~~~----- 59 (319)
T 4b8w_A 2 LYFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGE-----------DWVFVSSKDADLTDTAQTRALFEK----- 59 (319)
T ss_dssp CCCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTC-----------EEEECCTTTCCTTSHHHHHHHHHH-----
T ss_pred ccccCCeEEEECCCcHHHHHHHHHHHhcCC------cccc-----------cccccCceecccCCHHHHHHHHhh-----
Confidence 457889999999999999999999999997 1100 001233347899999999888864
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc------------
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA------------ 156 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~------------ 156 (263)
.++|+|||+|+...... .+.++..+.+++|+.++.++++++ ++.+.+++|++||...+..
T Consensus 60 -~~~d~Vih~A~~~~~~~---~~~~~~~~~~~~nv~gt~~ll~a~----~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~ 131 (319)
T 4b8w_A 60 -VQPTHVIHLAAMVGGLF---RNIKYNLDFWRKNVHMNDNVLHSA----FEVGARKVVSCLSTCIFPDKTTYPIDETMIH 131 (319)
T ss_dssp -SCCSEEEECCCCCCCHH---HHTTCHHHHHHHHHHHHHHHHHHH----HHTTCSEEEEECCGGGSCSSCCSSBCGGGGG
T ss_pred -cCCCEEEECceeccccc---ccccCHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEEcchhhcCCCCCCCccccccc
Confidence 36999999999753211 123456778999999999999988 4445579999999865421
Q ss_pred ----CCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchh-HHHHHH----hHhcCCC----
Q 024752 157 ----IPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNF-LEHANR----MVLRTPM---- 223 (263)
Q Consensus 157 ----~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~-~~~~~~----~~~~~~~---- 223 (263)
.|....|+.+|.+.+.+++.++.+. |++++.++|+.+..|..........+ ...... .....+.
T Consensus 132 ~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (319)
T 4b8w_A 132 NGPPHNSNFGYSYAKRMIDVQNRAYFQQY---GCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWG 208 (319)
T ss_dssp BSCCCSSSHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEES
T ss_pred cCCCCCCcchHHHHHHHHHHHHHHHHHhh---CCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeC
Confidence 1112259999999999999988776 89999999999998865432111111 111111 1222221
Q ss_pred -----CCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 224 -----LRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 224 -----~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
..+..++|++++++.++.... ...|+.+++.+|..++
T Consensus 209 ~g~~~~~~i~v~Dva~a~~~~~~~~~-~~~~~~~ni~~~~~~s 250 (319)
T 4b8w_A 209 TGNPRRQFIYSLDLAQLFIWVLREYN-EVEPIILSVGEEDEVS 250 (319)
T ss_dssp CSCCEECEEEHHHHHHHHHHHHHHCC-CSSCEEECCCGGGCEE
T ss_pred CCCeeEEEEeHHHHHHHHHHHHhccc-cCCceEEEecCCCcee
Confidence 234678999999988776432 2467899998876543
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-21 Score=162.42 Aligned_cols=194 Identities=17% Similarity=0.117 Sum_probs=142.5
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCccE
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNI 94 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 94 (263)
+++||||+|+||++++++|++ |++|++++|++... .+ +.+|+++++++.++++.+ ++|+
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~---------~~-----~~~Dl~~~~~~~~~~~~~------~~d~ 60 (273)
T 2ggs_A 2 RTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ---------GG-----YKLDLTDFPRLEDFIIKK------RPDV 60 (273)
T ss_dssp CEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT---------TC-----EECCTTSHHHHHHHHHHH------CCSE
T ss_pred EEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC---------CC-----ceeccCCHHHHHHHHHhc------CCCE
Confidence 699999999999999999994 89999999987421 11 789999999998888753 6899
Q ss_pred EEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCC----------CCcchh
Q 024752 95 LINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIP----------MCSIYA 164 (263)
Q Consensus 95 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~----------~~~~Y~ 164 (263)
||||||..... .+.+++++.+++|+.++.++++++.+ .+ +++|++||...+.+.+ +...|+
T Consensus 61 vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~ 131 (273)
T 2ggs_A 61 IINAAAMTDVD----KCEIEKEKAYKINAEAVRHIVRAGKV----ID-SYIVHISTDYVFDGEKGNYKEEDIPNPINYYG 131 (273)
T ss_dssp EEECCCCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEEEEGGGSCSSSCSBCTTSCCCCSSHHH
T ss_pred EEECCcccChh----hhhhCHHHHHHHhHHHHHHHHHHHHH----hC-CeEEEEecceeEcCCCCCcCCCCCCCCCCHHH
Confidence 99999975432 23577899999999999999999843 33 5999999988765432 256899
Q ss_pred hHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHH-HHhHhcCC------CCCCCChhhHHHHHH
Q 024752 165 SSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHA-NRMVLRTP------MLRPGEPNEVSSVVA 237 (263)
Q Consensus 165 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~va~~~~ 237 (263)
.+|++++.+++. +....++|+.+..+ . .+.... .......+ ...+.+++|++++++
T Consensus 132 ~sK~~~e~~~~~---------~~~~~iR~~~v~G~--~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~ 194 (273)
T 2ggs_A 132 LSKLLGETFALQ---------DDSLIIRTSGIFRN--K------GFPIYVYKTLKEGKTVFAFKGYYSPISARKLASAIL 194 (273)
T ss_dssp HHHHHHHHHHCC---------TTCEEEEECCCBSS--S------SHHHHHHHHHHTTCCEEEESCEECCCBHHHHHHHHH
T ss_pred HHHHHHHHHHhC---------CCeEEEeccccccc--c------HHHHHHHHHHHcCCCEEeecCCCCceEHHHHHHHHH
Confidence 999999999886 23456777776631 0 011000 11111111 346788999999999
Q ss_pred HHcCCCCCCccCcEEEeCCCccc
Q 024752 238 FLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 238 ~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
+++.... +| .+++++ ..+
T Consensus 195 ~~~~~~~---~g-~~~i~~-~~~ 212 (273)
T 2ggs_A 195 ELLELRK---TG-IIHVAG-ERI 212 (273)
T ss_dssp HHHHHTC---CE-EEECCC-CCE
T ss_pred HHHhcCc---CC-eEEECC-Ccc
Confidence 9887542 34 889987 543
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-21 Score=163.61 Aligned_cols=199 Identities=13% Similarity=0.077 Sum_probs=147.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHC--CCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 14 MTALVTGGTKGIGYAVVEELAAF--GAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
|+++||||+|+||++++++|+++ |++|++++|++.+.+.+. . ..+.++.+|++|++++.+++ ..
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~----~--~~~~~~~~D~~d~~~l~~~~--------~~ 66 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA----D--QGVEVRHGDYNQPESLQKAF--------AG 66 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH----H--TTCEEEECCTTCHHHHHHHT--------TT
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh----h--cCCeEEEeccCCHHHHHHHH--------hc
Confidence 56999999999999999999999 999999999887654432 1 24678899999998887776 35
Q ss_pred ccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHH
Q 024752 92 LNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMN 171 (263)
Q Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~ 171 (263)
+|++||+|+.. . . + ++|+.++.++++++ ++.+.++||++||..... ....|+.+|.+.+
T Consensus 67 ~d~vi~~a~~~---~----~-~------~~n~~~~~~l~~a~----~~~~~~~~v~~Ss~~~~~---~~~~y~~~K~~~E 125 (287)
T 2jl1_A 67 VSKLLFISGPH---Y----D-N------TLLIVQHANVVKAA----RDAGVKHIAYTGYAFAEE---SIIPLAHVHLATE 125 (287)
T ss_dssp CSEEEECCCCC---S----C-H------HHHHHHHHHHHHHH----HHTTCSEEEEEEETTGGG---CCSTHHHHHHHHH
T ss_pred CCEEEEcCCCC---c----C-c------hHHHHHHHHHHHHH----HHcCCCEEEEECCCCCCC---CCCchHHHHHHHH
Confidence 89999999952 1 1 1 57888988888887 445567999999987642 2247999999999
Q ss_pred HHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHH--h--HhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 172 QLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANR--M--VLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 172 ~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
.+++. .|++++.++||++.++..... +...... . ........+.+++|+++++..++.... .
T Consensus 126 ~~~~~-------~~~~~~ilrp~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~ 191 (287)
T 2jl1_A 126 YAIRT-------TNIPYTFLRNALYTDFFVNEG-----LRASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEEG--H 191 (287)
T ss_dssp HHHHH-------TTCCEEEEEECCBHHHHSSGG-----GHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSSS--C
T ss_pred HHHHH-------cCCCeEEEECCEeccccchhh-----HHHHhhCCceeccCCCCccCccCHHHHHHHHHHHhcCCC--C
Confidence 98863 489999999998876542111 1110000 0 001123356789999999998886432 3
Q ss_pred cCcEEEeCCCcccc
Q 024752 248 TGQVICVDGGYSVT 261 (263)
Q Consensus 248 ~G~~i~~dgG~~~~ 261 (263)
+|+.+++++|..++
T Consensus 192 ~g~~~~i~~~~~~s 205 (287)
T 2jl1_A 192 ENKTYNLVSNQPWT 205 (287)
T ss_dssp TTEEEEECCSSCBC
T ss_pred CCcEEEecCCCcCC
Confidence 79999999986554
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=3.8e-22 Score=168.45 Aligned_cols=201 Identities=11% Similarity=0.056 Sum_probs=147.3
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCccE
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNI 94 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 94 (263)
+++||||+|+||++++++|+ +|++|++++|+.. .+.+|+++++++.++++.. ++|+
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-----------------~~~~D~~d~~~~~~~~~~~------~~d~ 57 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-----------------EFCGDFSNPKGVAETVRKL------RPDV 57 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-----------------SSCCCTTCHHHHHHHHHHH------CCSE
T ss_pred eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-----------------cccccCCCHHHHHHHHHhc------CCCE
Confidence 69999999999999999999 8999999999862 2468999999988887642 6899
Q ss_pred EEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCC-----------CCcch
Q 024752 95 LINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIP-----------MCSIY 163 (263)
Q Consensus 95 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-----------~~~~Y 163 (263)
|||+||...... +.+++++.+++|+.++.++++++. +.+ .++|++||...+.+.+ +...|
T Consensus 58 vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~a~~----~~~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y 128 (299)
T 1n2s_A 58 IVNAAAHTAVDK----AESEPELAQLLNATSVEAIAKAAN----ETG-AWVVHYSTDYVFPGTGDIPWQETDATSPLNVY 128 (299)
T ss_dssp EEECCCCCCHHH----HTTCHHHHHHHHTHHHHHHHHHHT----TTT-CEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHH
T ss_pred EEECcccCCHhh----hhcCHHHHHHHHHHHHHHHHHHHH----HcC-CcEEEEecccEEeCCCCCCCCCCCCCCCccHH
Confidence 999999753211 224567889999999999999983 333 4899999986653321 24679
Q ss_pred hhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCC-------CCCCCChhhHHHHH
Q 024752 164 ASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTP-------MLRPGEPNEVSSVV 236 (263)
Q Consensus 164 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~va~~~ 236 (263)
+.+|.+.+.+++.++ .+++.++|+.+.++...... ...........+ ...+.+++|+++++
T Consensus 129 ~~sK~~~E~~~~~~~-------~~~~ilRp~~v~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 196 (299)
T 1n2s_A 129 GKTKLAGEKALQDNC-------PKHLIFRTSWVYAGKGNNFA-----KTMLRLAKERQTLSVINDQYGAPTGAELLADCT 196 (299)
T ss_dssp HHHHHHHHHHHHHHC-------SSEEEEEECSEECSSSCCHH-----HHHHHHHHHCSEEEEECSCEECCEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-------CCeEEEeeeeecCCCcCcHH-----HHHHHHHhcCCCEEeecCcccCCeeHHHHHHHH
Confidence 999999999998763 27899999999988643211 111111111111 13345689999999
Q ss_pred HHHcCCCCCCc-cCcEEEeCCCccc
Q 024752 237 AFLCLSATSYV-TGQVICVDGGYSV 260 (263)
Q Consensus 237 ~~l~s~~~~~~-~G~~i~~dgG~~~ 260 (263)
+.++....... .|+.+++.+|..+
T Consensus 197 ~~~~~~~~~~~~~~~~~~i~~~~~~ 221 (299)
T 1n2s_A 197 AHAIRVALNKPEVAGLYHLVAGGTT 221 (299)
T ss_dssp HHHHHHHHHCGGGCEEEECCCBSCE
T ss_pred HHHHHHhccccccCceEEEeCCCCC
Confidence 98876432122 5889999998654
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.87 E-value=8.3e-22 Score=165.46 Aligned_cols=194 Identities=16% Similarity=0.134 Sum_probs=146.2
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCccE
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNI 94 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 94 (263)
++|||||+|+||++++++|+++|++|++++|. .+|+++.+++.++++.. ++|+
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------------~~D~~d~~~~~~~~~~~------~~d~ 59 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK---------------------LLDITNISQVQQVVQEI------RPHI 59 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT---------------------TSCTTCHHHHHHHHHHH------CCSE
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc---------------------ccCCCCHHHHHHHHHhc------CCCE
Confidence 89999999999999999999999999999992 37999999998888753 6899
Q ss_pred EEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC-----------CCCcch
Q 024752 95 LINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI-----------PMCSIY 163 (263)
Q Consensus 95 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----------~~~~~Y 163 (263)
|||+||...... ..+++++.+++|+.++.++++++.+ .+ .++|++||...+.+. .+...|
T Consensus 60 vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y 130 (287)
T 3sc6_A 60 IIHCAAYTKVDQ----AEKERDLAYVINAIGARNVAVASQL----VG-AKLVYISTDYVFQGDRPEGYDEFHNPAPINIY 130 (287)
T ss_dssp EEECCCCCCHHH----HTTCHHHHHHHHTHHHHHHHHHHHH----HT-CEEEEEEEGGGSCCCCSSCBCTTSCCCCCSHH
T ss_pred EEECCcccChHH----HhcCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEchhhhcCCCCCCCCCCCCCCCCCCHH
Confidence 999999764321 2256788999999999999999843 33 489999998765322 235689
Q ss_pred hhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcC-------CCCCCCChhhHHHHH
Q 024752 164 ASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRT-------PMLRPGEPNEVSSVV 236 (263)
Q Consensus 164 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~va~~~ 236 (263)
+.+|.+.+.+++.++. +++.++|+.+..+...... ........... ....+..++|+++++
T Consensus 131 ~~sK~~~E~~~~~~~~-------~~~ilR~~~v~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 198 (287)
T 3sc6_A 131 GASKYAGEQFVKELHN-------KYFIVRTSWLYGKYGNNFV-----KTMIRLGKEREEISVVADQIGSPTYVADLNVMI 198 (287)
T ss_dssp HHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHH-----HHHHHHHTTCSEEEEECSCEECCEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCC-------CcEEEeeeeecCCCCCcHH-----HHHHHHHHcCCCeEeecCcccCceEHHHHHHHH
Confidence 9999999999987643 5688999999887543211 11111111111 123455699999999
Q ss_pred HHHcCCCCCCccCcEEEeCCCccc
Q 024752 237 AFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 237 ~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
++++.... ++.+++.+|..+
T Consensus 199 ~~~~~~~~----~~~~~i~~~~~~ 218 (287)
T 3sc6_A 199 NKLIHTSL----YGTYHVSNTGSC 218 (287)
T ss_dssp HHHHTSCC----CEEEECCCBSCE
T ss_pred HHHHhCCC----CCeEEEcCCCcc
Confidence 99887554 679999998754
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-22 Score=170.54 Aligned_cols=206 Identities=13% Similarity=0.065 Sum_probs=147.8
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
++|++|||| +|+||++++++|+++|++|++++|+.... ...+.++.+|+++.+++.++++ ++
T Consensus 2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~-------~~ 63 (286)
T 3gpi_A 2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM----------PAGVQTLIADVTRPDTLASIVH-------LR 63 (286)
T ss_dssp CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC----------CTTCCEEECCTTCGGGCTTGGG-------GC
T ss_pred CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc----------ccCCceEEccCCChHHHHHhhc-------CC
Confidence 467899999 59999999999999999999999987652 2457888999999988777653 46
Q ss_pred ccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC-----------CCC
Q 024752 92 LNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI-----------PMC 160 (263)
Q Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----------~~~ 160 (263)
+|+|||+||.. .++.+..+++|+.++.++++++ ++.+.+++|++||...+... .+.
T Consensus 64 ~d~vih~a~~~---------~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~ 130 (286)
T 3gpi_A 64 PEILVYCVAAS---------EYSDEHYRLSYVEGLRNTLSAL----EGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAK 130 (286)
T ss_dssp CSEEEECHHHH---------HHC-----CCSHHHHHHHHHHT----TTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCC
T ss_pred CCEEEEeCCCC---------CCCHHHHHHHHHHHHHHHHHHH----hhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCC
Confidence 99999999852 3556778899999999999988 44556799999998654321 135
Q ss_pred cchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHc
Q 024752 161 SIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC 240 (263)
Q Consensus 161 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~ 240 (263)
..|+.+|.+.+.+ +.. ++++.++|+.+..+....+... +.+ ............+..++|++++++.++
T Consensus 131 ~~Y~~sK~~~E~~-~~~--------~~~~ilR~~~v~G~~~~~~~~~--~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~~ 198 (286)
T 3gpi_A 131 DFSGKRMLEAEAL-LAA--------YSSTILRFSGIYGPGRLRMIRQ--AQT-PEQWPARNAWTNRIHRDDGAAFIAYLI 198 (286)
T ss_dssp SHHHHHHHHHHHH-GGG--------SSEEEEEECEEEBTTBCHHHHH--TTC-GGGSCSSBCEECEEEHHHHHHHHHHHH
T ss_pred ChhhHHHHHHHHH-Hhc--------CCeEEEecccccCCCchhHHHH--HHh-cccCCCcCceeEEEEHHHHHHHHHHHH
Confidence 6799999999988 542 8899999999988765421100 000 000001112234567899999999888
Q ss_pred CCCCCCccCcEEEeCCCccc
Q 024752 241 LSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 241 s~~~~~~~G~~i~~dgG~~~ 260 (263)
........|+.+++.+|..+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~ 218 (286)
T 3gpi_A 199 QQRSHAVPERLYIVTDNQPL 218 (286)
T ss_dssp HHHTTSCCCSEEEECCSCCE
T ss_pred hhhccCCCCceEEEeCCCCC
Confidence 65322346899999988754
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.9e-22 Score=171.63 Aligned_cols=214 Identities=17% Similarity=0.084 Sum_probs=144.4
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHh--cCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS--KGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
+++|+||||||+|+||++++++|+++|++|++++|+..........+.. ....+.++.+|++
T Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~---------------- 68 (321)
T 3vps_A 5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS---------------- 68 (321)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------------
T ss_pred cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------------
Confidence 5679999999999999999999999999999999987521000000000 0122334444443
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC-----------
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI----------- 157 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~----------- 157 (263)
++|+|||+|+....... .++....++ |+.++.++++++ ++.+.+++|++||...+...
T Consensus 69 --~~d~vi~~a~~~~~~~~----~~~~~~~~~-n~~~~~~ll~a~----~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~ 137 (321)
T 3vps_A 69 --DVRLVYHLASHKSVPRS----FKQPLDYLD-NVDSGRHLLALC----TSVGVPKVVVGSTCEVYGQADTLPTPEDSPL 137 (321)
T ss_dssp --TEEEEEECCCCCCHHHH----TTSTTTTHH-HHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCSCSSSSBCTTSCC
T ss_pred --cCCEEEECCccCChHHH----HhCHHHHHH-HHHHHHHHHHHH----HHcCCCeEEEecCHHHhCCCCCCCCCCCCCC
Confidence 68999999997653211 112233456 999999999988 34445799999998765322
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHccCCc-EEEEEecCcccCCccccccccchhHHHHHHhHhcC---------CCCCCC
Q 024752 158 PMCSIYASSKVAMNQLTKNLACEWAKDKI-RVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRT---------PMLRPG 227 (263)
Q Consensus 158 ~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi-~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 227 (263)
.+...|+.+|.+.+.+++.++.+ .|+ +++.++|+.+..+..........+. ....... ....+.
T Consensus 138 ~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~ilRp~~v~G~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~v 211 (321)
T 3vps_A 138 SPRSPYAASKVGLEMVAGAHQRA---SVAPEVGIVRFFNVYGPGERPDALVPRLC---ANLLTRNELPVEGDGEQRRDFT 211 (321)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHS---SSSCEEEEEEECEEECTTCCTTSHHHHHH---HHHHHHSEEEEETTSCCEECEE
T ss_pred CCCChhHHHHHHHHHHHHHHHHH---cCCCceEEEEeccccCcCCCCCChHHHHH---HHHHcCCCeEEeCCCCceEceE
Confidence 23567999999999999988776 389 9999999999987654311111111 1111111 112345
Q ss_pred ChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 228 EPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 228 ~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
+++|++++++.++..... | .+++.+|..++
T Consensus 212 ~v~Dva~~~~~~~~~~~~---g-~~~i~~~~~~s 241 (321)
T 3vps_A 212 YITDVVDKLVALANRPLP---S-VVNFGSGQSLS 241 (321)
T ss_dssp EHHHHHHHHHHGGGSCCC---S-EEEESCSCCEE
T ss_pred EHHHHHHHHHHHHhcCCC---C-eEEecCCCccc
Confidence 799999999998876544 7 99999987643
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.85 E-value=8.8e-21 Score=171.72 Aligned_cols=221 Identities=13% Similarity=0.087 Sum_probs=156.9
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhH---HHHHHHHH---------hcCCceEEEeccCCCHHHHHHH
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETEL---NQRIQEWK---------SKGLQVSGSVCDLKIRAQREKL 80 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~---~~~~~~~~---------~~~~~~~~~~~D~~~~~~~~~~ 80 (263)
.|+||||||+|+||++++++|.+.|++|++++|+.... +.+.+.+. ....++.++.+|+++++++.
T Consensus 150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-- 227 (508)
T 4f6l_B 150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-- 227 (508)
T ss_dssp CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC--
T ss_pred CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC--
Confidence 47999999999999999999999999999999998733 22222221 12467999999999977766
Q ss_pred HHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccc--cc---
Q 024752 81 METVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAG--VI--- 155 (263)
Q Consensus 81 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~--~~--- 155 (263)
.. .++|+|||||+.... .+.++..+++|+.++.++++++.+ +.+++|++||... ..
T Consensus 228 ------~~-~~~D~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-----~~~~~v~iSS~~vG~~~~~~ 288 (508)
T 4f6l_B 228 ------LP-ENMDTIIHAGARTDH-------FGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISVGTYFDID 288 (508)
T ss_dssp ------CS-SCCSEEEECCCC---------------CCHHHHHHHHHHHHHHHHT-----TTCEEEEEEESCTTSEECTT
T ss_pred ------Cc-cCCCEEEECCceecC-------CCCHHHHhhhHHHHHHHHHHHHHh-----CCCcEEEeCChhhccCCccC
Confidence 22 689999999997532 235677889999999999999844 4579999999876 10
Q ss_pred -------------cCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccccc----chhHHHHHHhH
Q 024752 156 -------------AIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKD----SNFLEHANRMV 218 (263)
Q Consensus 156 -------------~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~~~~ 218 (263)
+......|+.+|.+.+.+++.++. .|++++.++||.|..+........ ..+........
T Consensus 289 ~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~ 364 (508)
T 4f6l_B 289 TEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLL 364 (508)
T ss_dssp CSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHT
T ss_pred CcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHH
Confidence 011456799999999999987653 599999999999988765443111 11111111111
Q ss_pred hc--CCC------CCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 219 LR--TPM------LRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 219 ~~--~~~------~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
.. .|. ..+.+++|+|+++++++.... .|+.+++.+|..++
T Consensus 365 ~~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~---~~~~~nl~~~~~~s 412 (508)
T 4f6l_B 365 QLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNKMP 412 (508)
T ss_dssp TCSEEETTGGGSEEECEEHHHHHHHHHHHTTBCC---SCSEEEESCSCEEE
T ss_pred HcCCCCCCccCceEEEEcHHHHHHHHHHHHhCCC---CCCEEEeCCCCCCC
Confidence 11 111 125668999999999886544 69999999987543
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.3e-20 Score=157.85 Aligned_cols=197 Identities=15% Similarity=0.111 Sum_probs=138.8
Q ss_pred EEEEecCCCchHHHHHHHHHHC--CCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 15 TALVTGGTKGIGYAVVEELAAF--GAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
+++||||+|+||++++++|+++ |++|++++|++++.+.+.. ..+.++.+|++|++++.+++ ..+
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~D~~d~~~~~~~~--------~~~ 66 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA------QGITVRQADYGDEAALTSAL--------QGV 66 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH------TTCEEEECCTTCHHHHHHHT--------TTC
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc------CCCeEEEcCCCCHHHHHHHH--------hCC
Confidence 4899999999999999999998 9999999999876544321 24678899999998887765 358
Q ss_pred cEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHHH
Q 024752 93 NILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQ 172 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~ 172 (263)
|+|||+|+... ..|+.++.++++++ ++.+.++||++||.... . ....|+.+|.+.+.
T Consensus 67 d~vi~~a~~~~----------------~~~~~~~~~l~~a~----~~~~~~~~v~~Ss~~~~-~--~~~~y~~sK~~~e~ 123 (286)
T 2zcu_A 67 EKLLLISSSEV----------------GQRAPQHRNVINAA----KAAGVKFIAYTSLLHAD-T--SPLGLADEHIETEK 123 (286)
T ss_dssp SEEEECC------------------------CHHHHHHHHH----HHHTCCEEEEEEETTTT-T--CCSTTHHHHHHHHH
T ss_pred CEEEEeCCCCc----------------hHHHHHHHHHHHHH----HHcCCCEEEEECCCCCC-C--CcchhHHHHHHHHH
Confidence 99999999521 03666766666666 45556799999998775 2 23579999999999
Q ss_pred HHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHh--HhcCCCCCCCChhhHHHHHHHHcCCCCCCccCc
Q 024752 173 LTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRM--VLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQ 250 (263)
Q Consensus 173 ~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~ 250 (263)
+++. .|++++.++||++.++...... ..... ... ........+.+++|++++++.++.... .+|+
T Consensus 124 ~~~~-------~~~~~~ilrp~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~g~ 190 (286)
T 2zcu_A 124 MLAD-------SGIVYTLLRNGWYSENYLASAP---AALEH-GVFIGAAGDGKIASATRADYAAAAARVISEAG--HEGK 190 (286)
T ss_dssp HHHH-------HCSEEEEEEECCBHHHHHTTHH---HHHHH-TEEEESCTTCCBCCBCHHHHHHHHHHHHHSSS--CTTC
T ss_pred HHHH-------cCCCeEEEeChHHhhhhHHHhH---HhhcC-CceeccCCCCccccccHHHHHHHHHHHhcCCC--CCCc
Confidence 8864 3899999999988765421110 00000 000 001123456789999999998886532 3799
Q ss_pred EEEeCCCcccc
Q 024752 251 VICVDGGYSVT 261 (263)
Q Consensus 251 ~i~~dgG~~~~ 261 (263)
.++++||..++
T Consensus 191 ~~~i~~~~~~s 201 (286)
T 2zcu_A 191 VYELAGDSAWT 201 (286)
T ss_dssp EEEECCSSCBC
T ss_pred eEEEeCCCcCC
Confidence 99999986543
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.81 E-value=4.6e-19 Score=148.88 Aligned_cols=197 Identities=18% Similarity=0.117 Sum_probs=134.8
Q ss_pred EEEEecCCCchHHHHHHHHHHC-CCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 15 TALVTGGTKGIGYAVVEELAAF-GAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
+++||||+|+||++++++|++. |++|++++|++++...+ ....+.++.+|++|++++.+++ ..+|
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~------~~~~v~~~~~D~~d~~~l~~~~--------~~~d 67 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD------WRGKVSVRQLDYFNQESMVEAF--------KGMD 67 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG------GBTTBEEEECCTTCHHHHHHHT--------TTCS
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh------hhCCCEEEEcCCCCHHHHHHHH--------hCCC
Confidence 5999999999999999999998 99999999998764332 1245888999999999888776 3689
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHHHH
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQL 173 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~ 173 (263)
+|||+||.... . ..|+.++.++++++ ++.+.++||++||...... ..|..++...
T Consensus 68 ~vi~~a~~~~~-------~-------~~~~~~~~~l~~aa----~~~gv~~iv~~Ss~~~~~~----~~~~~~~~~~--- 122 (289)
T 3e48_A 68 TVVFIPSIIHP-------S-------FKRIPEVENLVYAA----KQSGVAHIIFIGYYADQHN----NPFHMSPYFG--- 122 (289)
T ss_dssp EEEECCCCCCS-------H-------HHHHHHHHHHHHHH----HHTTCCEEEEEEESCCSTT----CCSTTHHHHH---
T ss_pred EEEEeCCCCcc-------c-------hhhHHHHHHHHHHH----HHcCCCEEEEEcccCCCCC----CCCccchhHH---
Confidence 99999986432 1 12555555555554 6666789999999654332 2344443321
Q ss_pred HHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCC----CCChhhHHHHHHHHcCCCCCCccC
Q 024752 174 TKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLR----PGEPNEVSSVVAFLCLSATSYVTG 249 (263)
Q Consensus 174 ~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~va~~~~~l~s~~~~~~~G 249 (263)
.+...+...|++++.++||++.+++..... ..........+.+. +.+++|++++++.++..... .|
T Consensus 123 --~~e~~~~~~g~~~~ilrp~~~~~~~~~~~~------~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~--~g 192 (289)
T 3e48_A 123 --YASRLLSTSGIDYTYVRMAMYMDPLKPYLP------ELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDT--WG 192 (289)
T ss_dssp --HHHHHHHHHCCEEEEEEECEESTTHHHHHH------HHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGG--TT
T ss_pred --HHHHHHHHcCCCEEEEeccccccccHHHHH------HHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCc--CC
Confidence 222333445999999999999987542111 11111111223333 57799999999998876543 29
Q ss_pred cEEEeCCCcccc
Q 024752 250 QVICVDGGYSVT 261 (263)
Q Consensus 250 ~~i~~dgG~~~~ 261 (263)
+.++++ |..++
T Consensus 193 ~~~~~~-~~~~s 203 (289)
T 3e48_A 193 KRYLLS-GYSYD 203 (289)
T ss_dssp CEEEEC-CEEEE
T ss_pred ceEEeC-CCcCC
Confidence 999999 76543
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.81 E-value=1e-19 Score=153.68 Aligned_cols=206 Identities=14% Similarity=0.059 Sum_probs=139.1
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCC-CeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
.|+++||||+|+||++++++|+++| ++|++++|++..... ..+.. ..+.++.+|++|++++.++++ .
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~--~~~~~~~~D~~d~~~l~~~~~--------~ 72 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL--QGAEVVQGDQDDQVIMELALN--------G 72 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH--TTCEEEECCTTCHHHHHHHHT--------T
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH--CCCEEEEecCCCHHHHHHHHh--------c
Confidence 5899999999999999999999999 999999999776431 22222 246788999999999888763 5
Q ss_pred ccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc--CCCCcchhhHHHH
Q 024752 92 LNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA--IPMCSIYASSKVA 169 (263)
Q Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~--~~~~~~Y~~sK~a 169 (263)
+|+|||+++..... ....|+.+..+++++ +++.+.++||++|+...... .+....|..+|.+
T Consensus 73 ~d~vi~~a~~~~~~------------~~~~~~~~~~~~~~a----a~~~gv~~iv~~S~~~~~~~~~~~~~~~y~~sK~~ 136 (299)
T 2wm3_A 73 AYATFIVTNYWESC------------SQEQEVKQGKLLADL----ARRLGLHYVVYSGLENIKKLTAGRLAAAHFDGKGE 136 (299)
T ss_dssp CSEEEECCCHHHHT------------CHHHHHHHHHHHHHH----HHHHTCSEEEECCCCCHHHHTTTSCCCHHHHHHHH
T ss_pred CCEEEEeCCCCccc------------cchHHHHHHHHHHHH----HHHcCCCEEEEEcCccccccCCCcccCchhhHHHH
Confidence 89999999842110 123455555555544 46666789999666443221 1124679999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCC----CCCCChhhHHHHHHHHcCCCCC
Q 024752 170 MNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPM----LRPGEPNEVSSVVAFLCLSATS 245 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~va~~~~~l~s~~~~ 245 (263)
++.+.+. .|++++.++||++.+++........... ........|. ..+.+++|+++++..++....
T Consensus 137 ~e~~~~~-------~gi~~~ilrp~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~- 206 (299)
T 2wm3_A 137 VEEYFRD-------IGVPMTSVRLPCYFENLLSHFLPQKAPD--GKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPE- 206 (299)
T ss_dssp HHHHHHH-------HTCCEEEEECCEEGGGGGTTTCCEECTT--SSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHH-
T ss_pred HHHHHHH-------CCCCEEEEeecHHhhhchhhcCCcccCC--CCEEEEEecCCCCccceecHHHHHHHHHHHHcChh-
Confidence 9988864 2899999999999987654221110000 0000001121 235679999999988876432
Q ss_pred CccCcEEEeCC
Q 024752 246 YVTGQVICVDG 256 (263)
Q Consensus 246 ~~~G~~i~~dg 256 (263)
...|+.++++|
T Consensus 207 ~~~g~~~~~~g 217 (299)
T 2wm3_A 207 KYVGQNIGLST 217 (299)
T ss_dssp HHTTCEEECCS
T ss_pred hhCCeEEEeee
Confidence 24689999986
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.7e-19 Score=155.95 Aligned_cols=210 Identities=14% Similarity=0.044 Sum_probs=140.9
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEecc-CCCHHHHHHHHHHHHhhcC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD-LKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D-~~~~~~~~~~~~~~~~~~~ 89 (263)
+++|+++||||+|+||++++++|+++|++|++++|+++... .+++.. ...+.++.+| ++|++++.+++
T Consensus 3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~-~~~v~~v~~D~l~d~~~l~~~~-------- 71 (352)
T 1xgk_A 3 QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA-IPNVTLFQGPLLNNVPLMDTLF-------- 71 (352)
T ss_dssp CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT-STTEEEEESCCTTCHHHHHHHH--------
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh-cCCcEEEECCccCCHHHHHHHH--------
Confidence 45789999999999999999999999999999999887642 122322 2357888999 99999988776
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEcccc-ccccCCCCcchhhHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVA-GVIAIPMCSIYASSK 167 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~-~~~~~~~~~~Y~~sK 167 (263)
..+|++|||++.... ..|..+ .++++++ ++.+ .++||++||.. ...+.+....|..+|
T Consensus 72 ~~~d~Vi~~a~~~~~---------------~~~~~~-~~l~~aa----~~~g~v~~~V~~SS~~~~~~~~~~~~~y~~sK 131 (352)
T 1xgk_A 72 EGAHLAFINTTSQAG---------------DEIAIG-KDLADAA----KRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPK 131 (352)
T ss_dssp TTCSEEEECCCSTTS---------------CHHHHH-HHHHHHH----HHHSCCSEEEEEECCCGGGTSSCCCCTTTHHH
T ss_pred hcCCEEEEcCCCCCc---------------HHHHHH-HHHHHHH----HHcCCccEEEEeCCccccccCCCCCccHHHHH
Confidence 358999999875310 224444 4444444 5555 57999999986 344444557899999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhH-HHHHHhHhcCC-----CCCCCCh-hhHHHHHHHHc
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFL-EHANRMVLRTP-----MLRPGEP-NEVSSVVAFLC 240 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~-~~va~~~~~l~ 240 (263)
++.+.+++.+ |++++.|+||++...........-... ..........+ ...+.++ +|+++++..++
T Consensus 132 ~~~E~~~~~~-------gi~~~ivrpg~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l 204 (352)
T 1xgk_A 132 FTVENYVRQL-------GLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIF 204 (352)
T ss_dssp HHHHHHHHTS-------SSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHH
T ss_pred HHHHHHHHHc-------CCCEEEEecceecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHH
Confidence 9999998752 899999999977544322110000000 00000000001 1124567 89999998888
Q ss_pred CCCCCCccCcEEEeCCCc
Q 024752 241 LSATSYVTGQVICVDGGY 258 (263)
Q Consensus 241 s~~~~~~~G~~i~~dgG~ 258 (263)
........|+.+++.++.
T Consensus 205 ~~~~~~~~g~~~~l~~~~ 222 (352)
T 1xgk_A 205 KDGPQKWNGHRIALTFET 222 (352)
T ss_dssp HHCHHHHTTCEEEECSEE
T ss_pred hCCchhhCCeEEEEecCC
Confidence 644334568999998653
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.80 E-value=5.5e-19 Score=153.61 Aligned_cols=194 Identities=15% Similarity=0.132 Sum_probs=142.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
++|+||||+|+||++++++|+++|+ +|+..+|+ ++++++.++++ ++
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-------------------------~d~~~l~~~~~--------~~ 47 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-------------------------TKEEELESALL--------KA 47 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-------------------------CCHHHHHHHHH--------HC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-------------------------CCHHHHHHHhc--------cC
Confidence 3699999999999999999999998 88877775 56777777764 47
Q ss_pred cEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCc-eEEEEccccccccCCCCcchhhHHHHHH
Q 024752 93 NILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNG-NIIFISSVAGVIAIPMCSIYASSKVAMN 171 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-~iv~vsS~~~~~~~~~~~~Y~~sK~a~~ 171 (263)
|+|||+||..... +....+++|+.++.++++++ ++.+.. ++|++||..... ...|+.+|.+.+
T Consensus 48 d~Vih~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~v~~Ss~~~~~----~~~Y~~sK~~~E 111 (369)
T 3st7_A 48 DFIVHLAGVNRPE--------HDKEFSLGNVSYLDHVLDIL----TRNTKKPAILLSSSIQATQ----DNPYGESKLQGE 111 (369)
T ss_dssp SEEEECCCSBCTT--------CSTTCSSSCCBHHHHHHHHH----TTCSSCCEEEEEEEGGGGS----CSHHHHHHHHHH
T ss_pred CEEEECCcCCCCC--------CHHHHHHHHHHHHHHHHHHH----HHhCCCCeEEEeCchhhcC----CCCchHHHHHHH
Confidence 9999999976432 23446789999999999988 444444 899999987664 578999999999
Q ss_pred HHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCC--------CCCChhhHHHHHHHHcCCC
Q 024752 172 QLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPML--------RPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 172 ~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~va~~~~~l~s~~ 243 (263)
.+++.++++. |++++.++|+.+..+...... ...............+.. .+..++|++++++.++...
T Consensus 112 ~~~~~~~~~~---g~~~~i~R~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~ 187 (369)
T 3st7_A 112 QLLREYAEEY---GNTVYIYRWPNLFGKWCKPNY-NSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGT 187 (369)
T ss_dssp HHHHHHHHHH---CCCEEEEEECEEECTTCCTTS-SCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHh---CCCEEEEECCceeCCCCCCCc-chHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCC
Confidence 9999998876 799999999999887543321 111111112222222221 2345899999999888654
Q ss_pred CCCccCcEEEeCCCcccc
Q 024752 244 TSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 244 ~~~~~G~~i~~dgG~~~~ 261 (263)
.. ..|+.+++.+|..++
T Consensus 188 ~~-~~~~~~~i~~~~~~s 204 (369)
T 3st7_A 188 PT-IENGVPTVPNVFKVT 204 (369)
T ss_dssp CC-EETTEECCSCCEEEE
T ss_pred cc-cCCceEEeCCCCcee
Confidence 32 248999999886543
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.8e-18 Score=144.93 Aligned_cols=196 Identities=13% Similarity=-0.004 Sum_probs=137.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
++++|||| |+||++++++|+++|++|++++|++...+.+.. ..+.++.+|+++.+ + .++|
T Consensus 6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~D~~d~~------------~-~~~d 65 (286)
T 3ius_A 6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA------SGAEPLLWPGEEPS------------L-DGVT 65 (286)
T ss_dssp CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH------TTEEEEESSSSCCC------------C-TTCC
T ss_pred CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh------CCCeEEEecccccc------------c-CCCC
Confidence 78999998 999999999999999999999999887655432 35888999999832 3 5789
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhh--CCCceEEEEccccccccC-----------CCC
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKS--AGNGNIIFISSVAGVIAI-----------PMC 160 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~iv~vsS~~~~~~~-----------~~~ 160 (263)
+|||+|+..... .. . .+.+++.+++ .+.+++|++||...+... .+.
T Consensus 66 ~vi~~a~~~~~~-----~~--~--------------~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~ 124 (286)
T 3ius_A 66 HLLISTAPDSGG-----DP--V--------------LAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPT 124 (286)
T ss_dssp EEEECCCCBTTB-----CH--H--------------HHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCC
T ss_pred EEEECCCccccc-----cH--H--------------HHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCC
Confidence 999999965432 11 0 1233333444 445799999997654321 123
Q ss_pred cchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHc
Q 024752 161 SIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC 240 (263)
Q Consensus 161 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~ 240 (263)
..|+.+|.+.+.+++.+ .|++++.++|+.+..+............ ............+...+|++++++.++
T Consensus 125 ~~Y~~sK~~~E~~~~~~------~~~~~~ilRp~~v~G~~~~~~~~~~~~~--~~~~~~~~~~~~~i~v~Dva~a~~~~~ 196 (286)
T 3ius_A 125 AARGRWRVMAEQQWQAV------PNLPLHVFRLAGIYGPGRGPFSKLGKGG--IRRIIKPGQVFSRIHVEDIAQVLAASM 196 (286)
T ss_dssp SHHHHHHHHHHHHHHHS------TTCCEEEEEECEEEBTTBSSSTTSSSSC--CCEEECTTCCBCEEEHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhh------cCCCEEEEeccceECCCchHHHHHhcCC--ccccCCCCcccceEEHHHHHHHHHHHH
Confidence 56999999999998876 5899999999999887643321100000 000000012234566899999999888
Q ss_pred CCCCCCccCcEEEeCCCcccc
Q 024752 241 LSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 241 s~~~~~~~G~~i~~dgG~~~~ 261 (263)
.... .|+.+++.+|..++
T Consensus 197 ~~~~---~g~~~~i~~~~~~s 214 (286)
T 3ius_A 197 ARPD---PGAVYNVCDDEPVP 214 (286)
T ss_dssp HSCC---TTCEEEECCSCCBC
T ss_pred hCCC---CCCEEEEeCCCCcc
Confidence 7554 58999999987654
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=4e-18 Score=147.50 Aligned_cols=216 Identities=11% Similarity=0.034 Sum_probs=143.2
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCC-----CeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFG-----AIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
+|+++||||+|+||++++++|+++| ++|++++|+..... ....++.++.+|+++++++.++++.
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-------~~~~~~~~~~~Dl~d~~~~~~~~~~---- 69 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-------HEDNPINYVQCDISDPDDSQAKLSP---- 69 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-------CCSSCCEEEECCTTSHHHHHHHHTT----
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-------cccCceEEEEeecCCHHHHHHHHhc----
Confidence 4789999999999999999999999 99999999876532 1234578889999999988777642
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEE-------EEccccccccC---
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNII-------FISSVAGVIAI--- 157 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv-------~vsS~~~~~~~--- 157 (263)
. .++|+|||+||... ++.+..+++|+.++.++++++.+... +..++| ++||...+...
T Consensus 70 ~-~~~d~vih~a~~~~---------~~~~~~~~~n~~~~~~l~~a~~~~~~--~~~~~v~~~g~~i~~Ss~~vyg~~~~~ 137 (364)
T 2v6g_A 70 L-TDVTHVFYVTWANR---------STEQENCEANSKMFRNVLDAVIPNCP--NLKHISLQTGRKHYMGPFESYGKIESH 137 (364)
T ss_dssp C-TTCCEEEECCCCCC---------SSHHHHHHHHHHHHHHHHHHHTTTCT--TCCEEEEECCTHHHHCCGGGTTTSCCC
T ss_pred C-CCCCEEEECCCCCc---------chHHHHHHHhHHHHHHHHHHHHHhcc--ccceEEeccCceEEEechhhccccccC
Confidence 1 24999999999752 23577899999999999999854311 345776 68886543211
Q ss_pred -----------CCCcchhhHHHHHHHHHHHHHHHHccCC-cEEEEEecCcccCCccccccccchhHH-HHHHh--HhcCC
Q 024752 158 -----------PMCSIYASSKVAMNQLTKNLACEWAKDK-IRVNTVAPWVIRTPLLDTVEKDSNFLE-HANRM--VLRTP 222 (263)
Q Consensus 158 -----------~~~~~Y~~sK~a~~~~~~~~a~e~~~~g-i~v~~v~PG~v~t~~~~~~~~~~~~~~-~~~~~--~~~~~ 222 (263)
+....| .+.+.+++.++. ..| ++++.++|+.+..+....... ..... ..... ....+
T Consensus 138 ~~~~~E~~~~~~~~~~y----~~~E~~~~~~~~---~~~~~~~~ilRp~~v~G~~~~~~~~-~~~~~~~~~~~~~~~g~~ 209 (364)
T 2v6g_A 138 DPPYTEDLPRLKYMNFY----YDLEDIMLEEVE---KKEGLTWSVHRPGNIFGFSPYSMMN-LVGTLCVYAAICKHEGKV 209 (364)
T ss_dssp CSSBCTTSCCCSSCCHH----HHHHHHHHHHHT---TSTTCEEEEEEESSEECCCTTCSSC-HHHHHHHHHHHHHHHTCC
T ss_pred CCCCCccccCCccchhh----HHHHHHHHHHhh---cCCCceEEEECCCceeCCCCCcccc-hHHHHHHHHHHHHhcCCc
Confidence 112345 234444444332 245 999999999999876542211 00000 00111 11222
Q ss_pred CC------------CCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 223 ML------------RPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 223 ~~------------~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
.. ...+.+|++++++.++... ...|+.+++.+|..++
T Consensus 210 ~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~--~~~g~~~ni~~~~~~s 258 (364)
T 2v6g_A 210 LRFTGCKAAWDGYSDCSDADLIAEHHIWAAVDP--YAKNEAFNVSNGDVFK 258 (364)
T ss_dssp BCCCSCHHHHHSCBCCEEHHHHHHHHHHHHHCG--GGTTEEEEECCSCCBC
T ss_pred eecCCCcccccccCCCCcHHHHHHHHHHHHhCC--CCCCceEEecCCCcCC
Confidence 11 2233488999998777533 2368999999886543
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.78 E-value=3.2e-18 Score=144.82 Aligned_cols=198 Identities=15% Similarity=0.130 Sum_probs=131.7
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc-------hhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE-------TELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
+|+++||||+|+||++++++|+++|++|++++|+. ++.+. .+++.. ..+.++.+|++|++++.++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~~~l~~--~~v~~v~~D~~d~~~l~~~~~--- 75 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEEL-IDNYQS--LGVILLEGDINDHETLVKAIK--- 75 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHH-HHHHHH--TTCEEEECCTTCHHHHHHHHT---
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHH-HHHHHh--CCCEEEEeCCCCHHHHHHHHh---
Confidence 57899999999999999999999999999999987 43333 233333 246788999999998887763
Q ss_pred hhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccccc------cCC
Q 024752 86 SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVI------AIP 158 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~------~~~ 158 (263)
.+|+|||++|... +.+..++++++ ++.+ .+++|+ |..+.. ..|
T Consensus 76 -----~~d~vi~~a~~~~-------------------~~~~~~l~~aa----~~~g~v~~~v~--S~~g~~~~~~~~~~p 125 (307)
T 2gas_A 76 -----QVDIVICAAGRLL-------------------IEDQVKIIKAI----KEAGNVKKFFP--SEFGLDVDRHDAVEP 125 (307)
T ss_dssp -----TCSEEEECSSSSC-------------------GGGHHHHHHHH----HHHCCCSEEEC--SCCSSCTTSCCCCTT
T ss_pred -----CCCEEEECCcccc-------------------cccHHHHHHHH----HhcCCceEEee--cccccCcccccCCCc
Confidence 5899999999642 33445555554 5554 578873 433321 122
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccc---hhHHHHHHhHhcCCCCCCCChhhHHHH
Q 024752 159 MCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDS---NFLEHANRMVLRTPMLRPGEPNEVSSV 235 (263)
Q Consensus 159 ~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~va~~ 235 (263)
....| .+|.+++.+.+. .|++++.++||++.+++........ .................+.+++|++++
T Consensus 126 ~~~~y-~sK~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~ 197 (307)
T 2gas_A 126 VRQVF-EEKASIRRVIEA-------EGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTF 197 (307)
T ss_dssp HHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHH
T ss_pred chhHH-HHHHHHHHHHHH-------cCCCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHH
Confidence 24578 999999988763 2899999999999887654322110 000000000011122345679999999
Q ss_pred HHHHcCCCCCCccCcEEEeCC
Q 024752 236 VAFLCLSATSYVTGQVICVDG 256 (263)
Q Consensus 236 ~~~l~s~~~~~~~G~~i~~dg 256 (263)
+..++.+.. ..|+.+.+.|
T Consensus 198 ~~~~l~~~~--~~~~~~~~~~ 216 (307)
T 2gas_A 198 TIRAANDPN--TLNKAVHIRL 216 (307)
T ss_dssp HHHHHTCGG--GTTEEEECCC
T ss_pred HHHHHcCcc--ccCceEEEeC
Confidence 998886532 2477777765
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=2.8e-18 Score=147.85 Aligned_cols=208 Identities=10% Similarity=-0.004 Sum_probs=139.3
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc----hhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE----TELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
|..++|+||||+|+||+++++.|++.|++|++++|+. ++.+ ..+++.. ..+.++.+|++|.+++.+++++
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~~~l~~--~~v~~~~~Dl~d~~~l~~~~~~--- 81 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAK-IFKALED--KGAIIVYGLINEQEAMEKILKE--- 81 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH-HHHHHHH--TTCEEEECCTTCHHHHHHHHHH---
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHH-HHHHHHh--CCcEEEEeecCCHHHHHHHHhh---
Confidence 5578999999999999999999999999999999987 2222 2223322 3578889999999999888864
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccccc----cCCCCc
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVI----AIPMCS 161 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~----~~~~~~ 161 (263)
.++|+|||+++. .|+.++.++++++ ++.+ ..++|+ |+..... +.++..
T Consensus 82 ---~~~d~Vi~~a~~-------------------~n~~~~~~l~~aa----~~~g~v~~~v~-S~~g~~~~e~~~~~p~~ 134 (346)
T 3i6i_A 82 ---HEIDIVVSTVGG-------------------ESILDQIALVKAM----KAVGTIKRFLP-SEFGHDVNRADPVEPGL 134 (346)
T ss_dssp ---TTCCEEEECCCG-------------------GGGGGHHHHHHHH----HHHCCCSEEEC-SCCSSCTTTCCCCTTHH
T ss_pred ---CCCCEEEECCch-------------------hhHHHHHHHHHHH----HHcCCceEEee-cccCCCCCccCcCCCcc
Confidence 368999999996 2888888888887 4444 567775 4432211 123456
Q ss_pred chhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchh--H-HHHHHhHhcCCCCCCCChhhHHHHHHH
Q 024752 162 IYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNF--L-EHANRMVLRTPMLRPGEPNEVSSVVAF 238 (263)
Q Consensus 162 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~va~~~~~ 238 (263)
.|..+|.+.+.+.+. .|++++.++||++.............. . ..............+.+++|++++++.
T Consensus 135 ~y~~sK~~~e~~l~~-------~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~ 207 (346)
T 3i6i_A 135 NMYREKRRVRQLVEE-------SGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMK 207 (346)
T ss_dssp HHHHHHHHHHHHHHH-------TTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHH-------cCCCEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHH
Confidence 799999999888764 489999999999987654322111000 0 000001111122346779999999998
Q ss_pred HcCCCCCCccCcEEEeCC-Cccc
Q 024752 239 LCLSATSYVTGQVICVDG-GYSV 260 (263)
Q Consensus 239 l~s~~~~~~~G~~i~~dg-G~~~ 260 (263)
++.... ..|+.+++.| |..+
T Consensus 208 ~l~~~~--~~~~~~~i~g~~~~~ 228 (346)
T 3i6i_A 208 TVDDVR--TLNKSVHFRPSCNCL 228 (346)
T ss_dssp HTTCGG--GTTEEEECCCGGGEE
T ss_pred HHhCcc--ccCeEEEEeCCCCCC
Confidence 886542 3477777764 4443
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=8.1e-18 Score=142.69 Aligned_cols=203 Identities=12% Similarity=0.052 Sum_probs=133.1
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCch-----hHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET-----ELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
.++++||||+|+||++++++|+++|++|++++|+.. +.+. .+++. ...+.++.+|++|++++.++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~~~--~~~~~~~~~D~~d~~~l~~~~~----- 75 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQM-LLYFK--QLGAKLIEASLDDHQRLVDALK----- 75 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHH-HHHHH--TTTCEEECCCSSCHHHHHHHHT-----
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHH-HHHHH--hCCeEEEeCCCCCHHHHHHHHh-----
Confidence 467999999999999999999999999999999853 2222 22232 2357888999999998887763
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEcccccccc------CCCC
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVIA------IPMC 160 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~------~~~~ 160 (263)
.+|+|||+++..... .|+.+..++++++ ++.+ .++||+ |+...... .|..
T Consensus 76 ---~~d~vi~~a~~~~~~---------------~~~~~~~~l~~aa----~~~g~v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (313)
T 1qyd_A 76 ---QVDVVISALAGGVLS---------------HHILEQLKLVEAI----KEAGNIKRFLP-SEFGMDPDIMEHALQPGS 132 (313)
T ss_dssp ---TCSEEEECCCCSSSS---------------TTTTTHHHHHHHH----HHSCCCSEEEC-SCCSSCTTSCCCCCSSTT
T ss_pred ---CCCEEEECCccccch---------------hhHHHHHHHHHHH----HhcCCCceEEe-cCCcCCccccccCCCCCc
Confidence 589999999975331 2666776776666 5555 578875 43221111 2335
Q ss_pred cchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccc--h-hH-HHHHHhHhcCCCCCCCChhhHHHHH
Q 024752 161 SIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDS--N-FL-EHANRMVLRTPMLRPGEPNEVSSVV 236 (263)
Q Consensus 161 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~--~-~~-~~~~~~~~~~~~~~~~~~~~va~~~ 236 (263)
..| .+|.+++.+.+. .|++++.++||++.++......... . .. .....+........+.+++|+++++
T Consensus 133 ~~y-~sK~~~e~~~~~-------~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~ 204 (313)
T 1qyd_A 133 ITF-IDKRKVRRAIEA-------ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYT 204 (313)
T ss_dssp HHH-HHHHHHHHHHHH-------TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHH
T ss_pred chH-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHH
Confidence 578 999999887752 4899999999988765432211100 0 00 0000000001112356799999999
Q ss_pred HHHcCCCCCCccCcEEEeCC
Q 024752 237 AFLCLSATSYVTGQVICVDG 256 (263)
Q Consensus 237 ~~l~s~~~~~~~G~~i~~dg 256 (263)
..++.... ..|+.+++.|
T Consensus 205 ~~~l~~~~--~~~~~~~~~g 222 (313)
T 1qyd_A 205 IKSIDDPQ--TLNKTMYIRP 222 (313)
T ss_dssp HHHTTCGG--GSSSEEECCC
T ss_pred HHHHhCcc--cCCceEEEeC
Confidence 98886532 2477777765
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.75 E-value=2.4e-17 Score=149.44 Aligned_cols=205 Identities=15% Similarity=0.051 Sum_probs=140.0
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
+++||||||+|+||+++++.|++.|++|++++|+.... ..+.+|+.+. ..+.+ .++
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~--------------~~v~~d~~~~---------~~~~l-~~~ 202 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP--------------GKRFWDPLNP---------ASDLL-DGA 202 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT--------------TCEECCTTSC---------CTTTT-TTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc--------------cceeecccch---------hHHhc-CCC
Confidence 68999999999999999999999999999999987642 1245677642 12223 579
Q ss_pred cEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccc-c----------CCCCc
Q 024752 93 NILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVI-A----------IPMCS 161 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-~----------~~~~~ 161 (263)
|+|||+||..... ..+.+..+..+++|+.++.++++++. ++.+.+++|++||...+. . .++..
T Consensus 203 D~Vih~A~~~~~~---~~~~~~~~~~~~~Nv~gt~~ll~a~a---~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~ 276 (516)
T 3oh8_A 203 DVLVHLAGEPIFG---RFNDSHKEAIRESRVLPTKFLAELVA---ESTQCTTMISASAVGFYGHDRGDEILTEESESGDD 276 (516)
T ss_dssp SEEEECCCC--------CCGGGHHHHHHHTHHHHHHHHHHHH---HCSSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSS
T ss_pred CEEEECCCCcccc---ccchhHHHHHHHHHHHHHHHHHHHHH---hcCCCCEEEEeCcceEecCCCCCCccCCCCCCCcC
Confidence 9999999976443 23556778899999999999999843 334557999999976543 0 11345
Q ss_pred chhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhc--CC------CCCCCChhhHH
Q 024752 162 IYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLR--TP------MLRPGEPNEVS 233 (263)
Q Consensus 162 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--~~------~~~~~~~~~va 233 (263)
.|+.+|...+.+.+. +...|++++.++||.+.++..... .......... .. ...+..++|++
T Consensus 277 ~y~~~~~~~E~~~~~----~~~~gi~~~ilRp~~v~Gp~~~~~------~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva 346 (516)
T 3oh8_A 277 FLAEVCRDWEHATAP----ASDAGKRVAFIRTGVALSGRGGML------PLLKTLFSTGLGGKFGDGTSWFSWIAIDDLT 346 (516)
T ss_dssp HHHHHHHHHHHTTHH----HHHTTCEEEEEEECEEEBTTBSHH------HHHHHTTC---CCCCTTSCCEECEEEHHHHH
T ss_pred hHHHHHHHHHHHHHH----HHhCCCCEEEEEeeEEECCCCChH------HHHHHHHHhCCCcccCCCCceEceEeHHHHH
Confidence 688888887766543 334699999999999998753111 0000111110 01 12345689999
Q ss_pred HHHHHHcCCCCCCccCcEEEeCCCccc
Q 024752 234 SVVAFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 234 ~~~~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
++++.++.... . +..+++.++..+
T Consensus 347 ~ai~~~l~~~~--~-~g~~ni~~~~~~ 370 (516)
T 3oh8_A 347 DIYYRAIVDAQ--I-SGPINAVAPNPV 370 (516)
T ss_dssp HHHHHHHHCTT--C-CEEEEESCSCCE
T ss_pred HHHHHHHhCcc--c-CCcEEEECCCCC
Confidence 99998886543 2 346788777654
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.74 E-value=5.9e-18 Score=144.20 Aligned_cols=203 Identities=12% Similarity=0.105 Sum_probs=130.5
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc-h----hHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE-T----ELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~-~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
.++++||||+|+||++++++|+++|++|++++|+. . ...+..+++.. ..+.++.+|++|++++.++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~--~~v~~v~~D~~d~~~l~~a~~----- 76 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRS--MGVTIIEGEMEEHEKMVSVLK----- 76 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHH--TTCEEEECCTTCHHHHHHHHT-----
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhc--CCcEEEEecCCCHHHHHHHHc-----
Confidence 46799999999999999999999999999999986 2 22222223322 347888999999998888773
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccccc-c--C---CCC
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVI-A--I---PMC 160 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~-~--~---~~~ 160 (263)
.+|+|||+++... +.+..++++++ ++.+ .++||. |..+.. . . |..
T Consensus 77 ---~~d~vi~~a~~~~-------------------~~~~~~l~~aa----~~~g~v~~~v~--S~~g~~~~~~~~~~p~~ 128 (321)
T 3c1o_A 77 ---QVDIVISALPFPM-------------------ISSQIHIINAI----KAAGNIKRFLP--SDFGCEEDRIKPLPPFE 128 (321)
T ss_dssp ---TCSEEEECCCGGG-------------------SGGGHHHHHHH----HHHCCCCEEEC--SCCSSCGGGCCCCHHHH
T ss_pred ---CCCEEEECCCccc-------------------hhhHHHHHHHH----HHhCCccEEec--cccccCccccccCCCcc
Confidence 5899999999631 33444455544 5555 568873 433321 0 1 113
Q ss_pred cchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccccc--chhH-HHHHHhHhcCCCCCCCChhhHHHHHH
Q 024752 161 SIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKD--SNFL-EHANRMVLRTPMLRPGEPNEVSSVVA 237 (263)
Q Consensus 161 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~va~~~~ 237 (263)
..| .+|.+++.+.+. .|++++.++||++..+........ .... .....+........+.+++|+++++.
T Consensus 129 ~~y-~sK~~~e~~~~~-------~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~ 200 (321)
T 3c1o_A 129 SVL-EKKRIIRRAIEA-------AALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTI 200 (321)
T ss_dssp HHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHH
T ss_pred hHH-HHHHHHHHHHHH-------cCCCeEEEEeceeccccccccccccccccccCceEEecCCCcceeEeeHHHHHHHHH
Confidence 469 999999988863 278899999998876543211110 0000 00000001112234567999999999
Q ss_pred HHcCCCCCCccCcEEEeCC-Cccc
Q 024752 238 FLCLSATSYVTGQVICVDG-GYSV 260 (263)
Q Consensus 238 ~l~s~~~~~~~G~~i~~dg-G~~~ 260 (263)
.++.+.. ..|+.+++.| |..+
T Consensus 201 ~~l~~~~--~~g~~~~~~g~~~~~ 222 (321)
T 3c1o_A 201 KVACDPR--CCNRIVIYRPPKNII 222 (321)
T ss_dssp HHHHCGG--GTTEEEECCCGGGEE
T ss_pred HHHhCcc--ccCeEEEEeCCCCcc
Confidence 8886542 2488888876 4443
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=9.5e-18 Score=142.77 Aligned_cols=202 Identities=14% Similarity=0.140 Sum_probs=128.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
|+++||||+|+||++++++|+++|++|++++|+.....+...++.. ..+.++.+|++|++++.++++ .+|
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~--~~v~~v~~Dl~d~~~l~~a~~--------~~d 81 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS--LGAIIVKGELDEHEKLVELMK--------KVD 81 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH--TTCEEEECCTTCHHHHHHHHT--------TCS
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc--CCCEEEEecCCCHHHHHHHHc--------CCC
Confidence 5799999999999999999999999999999987522222333333 246788999999998888773 589
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccccc-c--C---CCCcchhhH
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVI-A--I---PMCSIYASS 166 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~-~--~---~~~~~Y~~s 166 (263)
+|||+++... +.+..++++++ ++.+ .+++|+ |+ .+.. . . |....| .+
T Consensus 82 ~vi~~a~~~~-------------------~~~~~~l~~aa----~~~g~v~~~v~-S~-~g~~~~~~~~~~p~~~~y-~s 135 (318)
T 2r6j_A 82 VVISALAFPQ-------------------ILDQFKILEAI----KVAGNIKRFLP-SD-FGVEEDRINALPPFEALI-ER 135 (318)
T ss_dssp EEEECCCGGG-------------------STTHHHHHHHH----HHHCCCCEEEC-SC-CSSCTTTCCCCHHHHHHH-HH
T ss_pred EEEECCchhh-------------------hHHHHHHHHHH----HhcCCCCEEEe-ec-cccCcccccCCCCcchhH-HH
Confidence 9999998531 23344444444 5555 568874 43 3311 1 1 123468 99
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
|.+++.+.+. .|++++.++||++.............................+.+++|+++++..++....
T Consensus 136 K~~~e~~~~~-------~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-- 206 (318)
T 2r6j_A 136 KRMIRRAIEE-------ANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPR-- 206 (318)
T ss_dssp HHHHHHHHHH-------TTCCBEEEECCEEHHHHHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGG--
T ss_pred HHHHHHHHHh-------cCCCeEEEEcceehhhhhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCcc--
Confidence 9999887763 4889999999988654322111000000000000001112235678999999998886532
Q ss_pred ccCcEEEeCC-Cccc
Q 024752 247 VTGQVICVDG-GYSV 260 (263)
Q Consensus 247 ~~G~~i~~dg-G~~~ 260 (263)
..|+.+++.| |..+
T Consensus 207 ~~~~~~~~~g~~~~~ 221 (318)
T 2r6j_A 207 ALNRVVIYRPSTNII 221 (318)
T ss_dssp GTTEEEECCCGGGEE
T ss_pred ccCeEEEecCCCCcc
Confidence 2367777764 4433
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.69 E-value=5.9e-17 Score=137.05 Aligned_cols=200 Identities=13% Similarity=0.124 Sum_probs=127.3
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhH-----HHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETEL-----NQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
.|+++||||+|+||+++++.|+++|++|++++|+.... .+..+++. ...+.++.+|++|++++.++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d~~~l~~~~~----- 76 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDHASLVEAVK----- 76 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH--TTTCEEECCCTTCHHHHHHHHH-----
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHH--hCCCEEEEeccCCHHHHHHHHc-----
Confidence 46799999999999999999999999999999985321 11222332 2357888999999999888774
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEcccccccc-----CCCCc
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVIA-----IPMCS 161 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~-----~~~~~ 161 (263)
.+|+|||+++... +.+..++++++ ++.+ .+++|+ |+...... .|...
T Consensus 77 ---~~d~vi~~a~~~~-------------------~~~~~~l~~aa----~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~ 129 (308)
T 1qyc_A 77 ---NVDVVISTVGSLQ-------------------IESQVNIIKAI----KEVGTVKRFFP-SEFGNDVDNVHAVEPAKS 129 (308)
T ss_dssp ---TCSEEEECCCGGG-------------------SGGGHHHHHHH----HHHCCCSEEEC-SCCSSCTTSCCCCTTHHH
T ss_pred ---CCCEEEECCcchh-------------------hhhHHHHHHHH----HhcCCCceEee-cccccCccccccCCcchh
Confidence 4899999998531 33344455554 5554 578874 44321111 12235
Q ss_pred chhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccc-hh-H-HHHHHhHhcCCCCCCCChhhHHHHHHH
Q 024752 162 IYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDS-NF-L-EHANRMVLRTPMLRPGEPNEVSSVVAF 238 (263)
Q Consensus 162 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-~~-~-~~~~~~~~~~~~~~~~~~~~va~~~~~ 238 (263)
.| .+|.+++.+.+. .|++++.++||++.++......... .. . ..............+.+++|+++++..
T Consensus 130 ~y-~sK~~~e~~~~~-------~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~ 201 (308)
T 1qyc_A 130 VF-EVKAKVRRAIEA-------EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIK 201 (308)
T ss_dssp HH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHT
T ss_pred HH-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccCCCCCceEEecCCCceEEEecHHHHHHHHHH
Confidence 68 999999888764 2789999999988764332211100 00 0 000000001112234678999999988
Q ss_pred HcCCCCCCccCcEEEeCC
Q 024752 239 LCLSATSYVTGQVICVDG 256 (263)
Q Consensus 239 l~s~~~~~~~G~~i~~dg 256 (263)
++.+.. ..|+.+++.|
T Consensus 202 ~l~~~~--~~~~~~~~~g 217 (308)
T 1qyc_A 202 AVDDPR--TLNKTLYLRL 217 (308)
T ss_dssp TSSCGG--GTTEEEECCC
T ss_pred HHhCcc--ccCeEEEEeC
Confidence 876432 2477777765
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.2e-14 Score=122.38 Aligned_cols=207 Identities=18% Similarity=0.112 Sum_probs=130.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
++||||||+|.||++++++|.++|++|+++.|++... . +..| .+. .+.+ ..+|
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~------------~---~~~~-----~~~------~~~l-~~~d 53 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG------------R---ITWD-----ELA------ASGL-PSCD 53 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT------------E---EEHH-----HHH------HHCC-CSCS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC------------e---eecc-----hhh------Hhhc-cCCC
Confidence 3699999999999999999999999999999986431 1 1111 000 1123 5799
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC-----------CCCcc
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI-----------PMCSI 162 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----------~~~~~ 162 (263)
.+||.||.....+....+.+.....++.|+.++.++++++... ..+..++|+.||...+... .....
T Consensus 54 ~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~--~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~ 131 (298)
T 4b4o_A 54 AAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKA--PQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDF 131 (298)
T ss_dssp EEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHC--SSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSH
T ss_pred EEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHh--CCCceEEEEEeeeeeecCCCCCcccccCCccccch
Confidence 9999998654444444567777888999999998888776322 1223457777776654321 12233
Q ss_pred hhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhc------CCCCCCCChhhHHHHH
Q 024752 163 YASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLR------TPMLRPGEPNEVSSVV 236 (263)
Q Consensus 163 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~va~~~ 236 (263)
|+..|...+.. ......++++..+.|+.|..+....... +... ...... .....+...+|+++++
T Consensus 132 ~~~~~~~~e~~-----~~~~~~~~~~~~~r~~~v~g~~~~~~~~---~~~~-~~~~~~~~~g~g~~~~~~ihv~Dva~a~ 202 (298)
T 4b4o_A 132 FSNLVTKWEAA-----ARLPGDSTRQVVVRSGVVLGRGGGAMGH---MLLP-FRLGLGGPIGSGHQFFPWIHIGDLAGIL 202 (298)
T ss_dssp HHHHHHHHHHH-----HCCSSSSSEEEEEEECEEECTTSHHHHH---HHHH-HHTTCCCCBTTSCSBCCEEEHHHHHHHH
T ss_pred hHHHHHHHHHH-----HHhhccCCceeeeeeeeEEcCCCCchhH---HHHH-HhcCCcceecccCceeecCcHHHHHHHH
Confidence 44444444332 2234678999999999998875322111 1000 011111 1112345689999999
Q ss_pred HHHcCCCCCCccCcEEEeCCCcccc
Q 024752 237 AFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 237 ~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
.+++..... +..+|+.++..++
T Consensus 203 ~~~~~~~~~---~g~yn~~~~~~~t 224 (298)
T 4b4o_A 203 THALEANHV---HGVLNGVAPSSAT 224 (298)
T ss_dssp HHHHHCTTC---CEEEEESCSCCCB
T ss_pred HHHHhCCCC---CCeEEEECCCccC
Confidence 887754432 4488998887654
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=2.5e-14 Score=120.08 Aligned_cols=111 Identities=18% Similarity=0.216 Sum_probs=85.4
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
.+++++|+++||||+||+|+++++.|+++|++|++++|+.++.+++.+++... ..+.++.+|+++++++.+++
T Consensus 114 ~~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~-~~~~~~~~D~~~~~~~~~~~------ 186 (287)
T 1lu9_A 114 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAV------ 186 (287)
T ss_dssp TSCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHT------
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEecCCCHHHHHHHH------
Confidence 46789999999999999999999999999999999999999888888777542 23566789999998877665
Q ss_pred cCCCccEEEeCCCCCCCC-CCCCCCH-HHHHHHHHhhhHhHH
Q 024752 88 FDGKLNILINNAGTFIPK-ETTEFTE-EDFSTVMTTNFESAY 127 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~-~~~~~~~-~~~~~~~~~n~~~~~ 127 (263)
..+|++|||+|..... ++.+.+. ++++..+++|+.+++
T Consensus 187 --~~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~ 226 (287)
T 1lu9_A 187 --KGAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL 226 (287)
T ss_dssp --TTCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred --HhCCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence 3579999999865322 2112222 444556777887766
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=1.9e-12 Score=110.57 Aligned_cols=162 Identities=12% Similarity=0.113 Sum_probs=109.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-------eEEEeeCCc--hhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHH
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGA-------IVHTCSRNE--TELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 84 (263)
++++||||+|+||.+++..|++.|. .|+++++++ +..+....++....... + .|+++.++..+++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~--~-~di~~~~~~~~a~--- 78 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPL--L-AGLEATDDPKVAF--- 78 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTT--E-EEEEEESCHHHHT---
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccc--c-CCeEeccChHHHh---
Confidence 4799999999999999999999986 799999875 22333333443221121 2 4665544444333
Q ss_pred HhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccc--------c-
Q 024752 85 SSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGV--------I- 155 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~--------~- 155 (263)
...|++||.||..... ..+ ..+.+++|+.++..+++++...- ....+++++|+.... .
T Consensus 79 -----~~~D~Vih~Ag~~~~~---~~~---~~~~~~~Nv~~t~~l~~a~~~~~--~~~~~vvv~snp~~~~~~~~~~~~~ 145 (327)
T 1y7t_A 79 -----KDADYALLVGAAPRKA---GME---RRDLLQVNGKIFTEQGRALAEVA--KKDVKVLVVGNPANTNALIAYKNAP 145 (327)
T ss_dssp -----TTCSEEEECCCCCCCT---TCC---HHHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHHTCT
T ss_pred -----CCCCEEEECCCcCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhhc--CCCeEEEEeCCchhhhHHHHHHHcC
Confidence 3589999999976432 122 35679999999999999985431 134688888886521 1
Q ss_pred cCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCccc
Q 024752 156 AIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIR 197 (263)
Q Consensus 156 ~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~ 197 (263)
+.++...|+.+|...+.+...++..+ |+.+..++|..|.
T Consensus 146 ~~~p~~~yg~tkl~~er~~~~~a~~~---g~~~~~vr~~~V~ 184 (327)
T 1y7t_A 146 GLNPRNFTAMTRLDHNRAKAQLAKKT---GTGVDRIRRMTVW 184 (327)
T ss_dssp TSCGGGEEECCHHHHHHHHHHHHHHH---TCCGGGEECCEEE
T ss_pred CCChhheeccchHHHHHHHHHHHHHh---CcChhheeeeEEE
Confidence 24455679999999999998888776 4544445544443
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=1.6e-12 Score=104.25 Aligned_cols=153 Identities=14% Similarity=0.142 Sum_probs=93.0
Q ss_pred CCCCCEEEEecC----------------CCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCC
Q 024752 10 SLKGMTALVTGG----------------TKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKI 73 (263)
Q Consensus 10 ~~~~k~vlVtGa----------------s~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 73 (263)
+|+||++||||| ||+||.++|+.|+++|++|++++++.. ++ ....+ ..+|+++
T Consensus 5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~--------~~~g~--~~~dv~~ 73 (226)
T 1u7z_A 5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP--------TPPFV--KRVDVMT 73 (226)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC--------CCTTE--EEEECCS
T ss_pred CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc--------cCCCC--eEEccCc
Confidence 589999999999 689999999999999999999988652 11 01112 2467777
Q ss_pred HHHHHHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHH--HHhhhHhHHHHHHHHhHHHhhC-CCceEEEEcc
Q 024752 74 RAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTV--MTTNFESAYHLSQLAHPLLKSA-GNGNIIFISS 150 (263)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~--~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS 150 (263)
.++ +++.+.+.+ +++|++|||||+....+.. .+.+.+.+. -..++.-.+....-+++.+.+. ..+.++ |+
T Consensus 74 ~~~---~~~~v~~~~-~~~Dili~~Aav~d~~p~~-~~~~KIkk~~~~~~~l~l~L~~~pdIL~~l~~~~~~~~~~-VG- 146 (226)
T 1u7z_A 74 ALE---MEAAVNASV-QQQNIFIGCAAVADYRAAT-VAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPYV-VG- 146 (226)
T ss_dssp HHH---HHHHHHHHG-GGCSEEEECCBCCSEEESS-CCSSCC-------CEEEEEEEECCCHHHHHHHCSSSCCEE-EE-
T ss_pred HHH---HHHHHHHhc-CCCCEEEECCcccCCCCcc-CChHHhccccccCCceEEEEeecHHHHHHHHhhhcCCcEE-EE-
Confidence 544 556666777 7899999999987544432 222222220 0222222233333344445543 223332 21
Q ss_pred ccccccCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCc
Q 024752 151 VAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWV 195 (263)
Q Consensus 151 ~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~ 195 (263)
+ ..+. +.+.+....++.++|+.+...+|-.
T Consensus 147 ------F---aaEt------~~l~e~A~~kL~~k~~d~ivaN~~~ 176 (226)
T 1u7z_A 147 ------F---AAET------NNVEEYARQKRIRKNLDLICANDVS 176 (226)
T ss_dssp ------E---EEES------SSHHHHHHHHHHHHTCSEEEEEECS
T ss_pred ------c---chhh------chHHHHHHHHHHhcCCCEEEEeecc
Confidence 1 1111 3366777778887898888887754
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=98.99 E-value=1.3e-10 Score=93.29 Aligned_cols=91 Identities=18% Similarity=0.191 Sum_probs=64.5
Q ss_pred CCCEEEEecC----------------CCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHH
Q 024752 12 KGMTALVTGG----------------TKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRA 75 (263)
Q Consensus 12 ~~k~vlVtGa----------------s~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 75 (263)
+||+|||||| +|++|.++|+.|+++|++|++++|+..... .....+. ..|++
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~-------~~~~~~~--~~~v~--- 69 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP-------EPHPNLS--IREIT--- 69 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC-------CCCTTEE--EEECC---
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-------cCCCCeE--EEEHh---
Confidence 5899999999 788999999999999999999999753210 0011222 23444
Q ss_pred HHHHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHH
Q 024752 76 QREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDF 115 (263)
Q Consensus 76 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~ 115 (263)
++.+.++.+.+.+ +++|++|+|||+....+....+.+.+
T Consensus 70 s~~em~~~v~~~~-~~~Dili~aAAvsD~~p~~~~~~e~~ 108 (232)
T 2gk4_A 70 NTKDLLIEMQERV-QDYQVLIHSMAVSDYTPVYMTGLEEV 108 (232)
T ss_dssp SHHHHHHHHHHHG-GGCSEEEECSBCCSEEEEEEEEHHHH
T ss_pred HHHHHHHHHHHhc-CCCCEEEEcCccccccchhhcchhhh
Confidence 5666677777777 78999999999887655443334443
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=98.95 E-value=5.4e-09 Score=75.03 Aligned_cols=74 Identities=20% Similarity=0.171 Sum_probs=61.7
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCC-CeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
.+++++|+|+ |++|+++++.|.+.| ++|++++|++++.+... ...+..+.+|+++.+++.+++ .
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~--------~ 68 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN------RMGVATKQVDAKDEAGLAKAL--------G 68 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH------TTTCEEEECCTTCHHHHHHHT--------T
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH------hCCCcEEEecCCCHHHHHHHH--------c
Confidence 4578999999 999999999999999 89999999988766554 234567889999988777665 3
Q ss_pred CccEEEeCCC
Q 024752 91 KLNILINNAG 100 (263)
Q Consensus 91 ~id~li~~ag 100 (263)
.+|++|++++
T Consensus 69 ~~d~vi~~~~ 78 (118)
T 3ic5_A 69 GFDAVISAAP 78 (118)
T ss_dssp TCSEEEECSC
T ss_pred CCCEEEECCC
Confidence 6899999996
|
| >3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=2.9e-12 Score=113.30 Aligned_cols=132 Identities=17% Similarity=0.133 Sum_probs=78.3
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHH------hc--CCceEEEec---cCCCHH
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWK------SK--GLQVSGSVC---DLKIRA 75 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~------~~--~~~~~~~~~---D~~~~~ 75 (263)
..+++.||+++|||++ +||+++|+.|+..|++|+++++++...++...+.. +. ..++..... |+-+.+
T Consensus 259 tg~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv~~lee~~~~aDvVi~atG~~~vl~~e 337 (488)
T 3ond_A 259 TDVMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDVVSEADIFVTTTGNKDIIMLD 337 (488)
T ss_dssp HCCCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGTTTTCSEEEECSSCSCSBCHH
T ss_pred cCCcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCccCCHHHHHHhcCEEEeCCCChhhhhHH
Confidence 4567899999999987 99999999999999999999999877665543210 00 111111110 111111
Q ss_pred HHHHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHH-------HhhhHhHHHHH-HHHhHHHhhCCCceEEE
Q 024752 76 QREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVM-------TTNFESAYHLS-QLAHPLLKSAGNGNIIF 147 (263)
Q Consensus 76 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~-------~~n~~~~~~~~-~~~~~~~~~~~~~~iv~ 147 (263)
. .+. -+.+.+|+|+|.. ..+.+.+.++... ..|+.+.+... +..++.|.+ |+||+
T Consensus 338 ----~----l~~--mk~gaiVvNaG~~----~~Ei~~~~l~~~~~v~~~~i~~~v~~~~~~~fg~aI~lLae---GRIVN 400 (488)
T 3ond_A 338 ----H----MKK--MKNNAIVCNIGHF----DNEIDMLGLETHPGVKRITIKPQTDRWVFPETNTGIIILAE---GRLMN 400 (488)
T ss_dssp ----H----HTT--SCTTEEEEESSST----TTTBTHHHHHTSTTCEEEEEETTEEEEECTTTCCEEEEEGG---GSCHH
T ss_pred ----H----HHh--cCCCeEEEEcCCC----CcccchHHHHHhhhhheEEeeeeEEEEEecchHHHHHHHcC---CcEEE
Confidence 1 111 2567788888865 2244666665542 23333222211 233333333 89999
Q ss_pred Ecccccccc
Q 024752 148 ISSVAGVIA 156 (263)
Q Consensus 148 vsS~~~~~~ 156 (263)
+||..+..+
T Consensus 401 lsS~~G~p~ 409 (488)
T 3ond_A 401 LGCATGHPS 409 (488)
T ss_dssp HHHSCCSCH
T ss_pred EecCcccCc
Confidence 999876633
|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=2.1e-09 Score=81.82 Aligned_cols=78 Identities=12% Similarity=0.072 Sum_probs=65.0
Q ss_pred CchHHHHHHHHHHCCCeEEEeeCCchhHH---HHHHHHHhcCCceEEEeccCCCH--HHHHHHHHHHHhhcCCCccEEEe
Q 024752 23 KGIGYAVVEELAAFGAIVHTCSRNETELN---QRIQEWKSKGLQVSGSVCDLKIR--AQREKLMETVSSQFDGKLNILIN 97 (263)
Q Consensus 23 ~giG~~~a~~l~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~~id~li~ 97 (263)
+.++.++++.|++.|++|++..|+..... +..+.+.+.|.++..+++|++++ ++++++++.+.+.+ |+ |+|||
T Consensus 26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~-G~-dVLVn 103 (157)
T 3gxh_A 26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHK-GK-DVLVH 103 (157)
T ss_dssp BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTT-TS-CEEEE
T ss_pred CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcC-CC-CEEEE
Confidence 35789999999999999999888765432 23555666788899999999999 99999999999888 77 99999
Q ss_pred CCCCC
Q 024752 98 NAGTF 102 (263)
Q Consensus 98 ~ag~~ 102 (263)
|||+.
T Consensus 104 nAgg~ 108 (157)
T 3gxh_A 104 CLANY 108 (157)
T ss_dssp CSBSH
T ss_pred CCCCC
Confidence 99963
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=98.83 E-value=1.6e-08 Score=79.73 Aligned_cols=103 Identities=19% Similarity=0.273 Sum_probs=71.2
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
+|++++||||+||||+++++.+...|++|++++|+++..+... +.+... ..|.++.+..+.+.+.. . ++.
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~----~~g~~~---~~d~~~~~~~~~~~~~~-~--~~~ 107 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS----RLGVEY---VGDSRSVDFADEILELT-D--GYG 107 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----TTCCSE---EEETTCSTHHHHHHHHT-T--TCC
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HcCCCE---EeeCCcHHHHHHHHHHh-C--CCC
Confidence 5899999999999999999999999999999999987654432 233322 24776654433333222 1 136
Q ss_pred ccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccc
Q 024752 92 LNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVA 152 (263)
Q Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~ 152 (263)
+|++|+|+|. + .++.+++.+++ +|++|.+++..
T Consensus 108 ~D~vi~~~g~-----------~---------------~~~~~~~~l~~--~G~~v~~g~~~ 140 (198)
T 1pqw_A 108 VDVVLNSLAG-----------E---------------AIQRGVQILAP--GGRFIELGKKD 140 (198)
T ss_dssp EEEEEECCCT-----------H---------------HHHHHHHTEEE--EEEEEECSCGG
T ss_pred CeEEEECCch-----------H---------------HHHHHHHHhcc--CCEEEEEcCCC
Confidence 9999999972 0 12344555544 68999998754
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=98.77 E-value=5.1e-08 Score=85.43 Aligned_cols=81 Identities=22% Similarity=0.211 Sum_probs=70.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC---CeEEEeeCCchhHHHHHHHHHhc-CCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFG---AIVHTCSRNETELNQRIQEWKSK-GLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g---~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
++++|+|| |+||+++++.|++.| ..|++.+|+.++++++.+++... +.++..+.+|+++.+++++++++.
T Consensus 2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~----- 75 (405)
T 4ina_A 2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV----- 75 (405)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-----
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-----
Confidence 57899999 899999999999998 48999999999999998887653 245788899999999999988754
Q ss_pred CCccEEEeCCCC
Q 024752 90 GKLNILINNAGT 101 (263)
Q Consensus 90 ~~id~li~~ag~ 101 (263)
++|+||||++.
T Consensus 76 -~~DvVin~ag~ 86 (405)
T 4ina_A 76 -KPQIVLNIALP 86 (405)
T ss_dssp -CCSEEEECSCG
T ss_pred -CCCEEEECCCc
Confidence 58999999984
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=98.68 E-value=9.4e-09 Score=86.00 Aligned_cols=84 Identities=18% Similarity=0.108 Sum_probs=62.5
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
.+++++|+++|||++ |+|+++++.|++.| +|++++|+.++++++.+++...+.....+.+|+++. .+.
T Consensus 123 ~~~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~----------~~~ 190 (287)
T 1nvt_A 123 IGRVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL----------DVD 190 (287)
T ss_dssp HCCCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT----------TCC
T ss_pred CCCcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH----------HHh
Confidence 457899999999997 99999999999999 999999999988888777654210000112344431 233
Q ss_pred cCCCccEEEeCCCCCCC
Q 024752 88 FDGKLNILINNAGTFIP 104 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~ 104 (263)
+ +++|++|||+|....
T Consensus 191 ~-~~~DilVn~ag~~~~ 206 (287)
T 1nvt_A 191 L-DGVDIIINATPIGMY 206 (287)
T ss_dssp C-TTCCEEEECSCTTCT
T ss_pred h-CCCCEEEECCCCCCC
Confidence 4 689999999997653
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.66 E-value=3.8e-08 Score=85.25 Aligned_cols=107 Identities=16% Similarity=0.152 Sum_probs=75.0
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
.+++++++|+|+ |+||+.+++.+...|++|++++|++++++...+.+ +.. +.+|.++.+++.+++.
T Consensus 163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~---g~~---~~~~~~~~~~l~~~~~------- 228 (369)
T 2eez_A 163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF---GGR---VITLTATEANIKKSVQ------- 228 (369)
T ss_dssp BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TTS---EEEEECCHHHHHHHHH-------
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc---Cce---EEEecCCHHHHHHHHh-------
Confidence 588999999999 99999999999999999999999988776554332 333 3467777777766653
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccc
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVA 152 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~ 152 (263)
..|++|++++...... +..+.+..++.|++ ++.||++++..
T Consensus 229 -~~DvVi~~~g~~~~~~-------------------~~li~~~~l~~mk~--gg~iV~v~~~~ 269 (369)
T 2eez_A 229 -HADLLIGAVLVPGAKA-------------------PKLVTRDMLSLMKE--GAVIVDVAVDQ 269 (369)
T ss_dssp -HCSEEEECCC--------------------------CCSCHHHHTTSCT--TCEEEECC---
T ss_pred -CCCEEEECCCCCcccc-------------------chhHHHHHHHhhcC--CCEEEEEecCC
Confidence 5799999999642110 02234566677753 68999998754
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.66 E-value=8.5e-08 Score=82.25 Aligned_cols=104 Identities=16% Similarity=0.175 Sum_probs=75.1
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
.|++++|+|++|+||+.+++.+...|++|++++|++++.+.. ++ .+.. ...|.++.+++.+.+.++.. +.
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~-~~---~g~~---~~~d~~~~~~~~~~~~~~~~---~~ 238 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF-RS---IGGE---VFIDFTKEKDIVGAVLKATD---GG 238 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH-HH---TTCC---EEEETTTCSCHHHHHHHHHT---SC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH-HH---cCCc---eEEecCccHhHHHHHHHHhC---CC
Confidence 589999999999999999999999999999999998876433 22 2332 22477755555555555432 37
Q ss_pred ccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccc
Q 024752 92 LNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVA 152 (263)
Q Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~ 152 (263)
+|++|+++|.. + .++.+++.+++ +|+++.+++..
T Consensus 239 ~D~vi~~~g~~----------~---------------~~~~~~~~l~~--~G~iv~~g~~~ 272 (347)
T 2hcy_A 239 AHGVINVSVSE----------A---------------AIEASTRYVRA--NGTTVLVGMPA 272 (347)
T ss_dssp EEEEEECSSCH----------H---------------HHHHHTTSEEE--EEEEEECCCCT
T ss_pred CCEEEECCCcH----------H---------------HHHHHHHHHhc--CCEEEEEeCCC
Confidence 99999999831 1 34555666654 58999998754
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=98.65 E-value=5e-08 Score=86.55 Aligned_cols=78 Identities=13% Similarity=0.068 Sum_probs=62.7
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
++|+++|+| +|++|+++++.|++.|++|++++|+.++++++.+++ ..+..+.+|+++.+++.+++ .+
T Consensus 2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~----~~~~~~~~Dv~d~~~l~~~l--------~~ 68 (450)
T 1ff9_A 2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV----QHSTPISLDVNDDAALDAEV--------AK 68 (450)
T ss_dssp CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC----TTEEEEECCTTCHHHHHHHH--------TT
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc----CCceEEEeecCCHHHHHHHH--------cC
Confidence 578999998 799999999999999999999999987765554322 23667889999988877765 36
Q ss_pred ccEEEeCCCCC
Q 024752 92 LNILINNAGTF 102 (263)
Q Consensus 92 id~li~~ag~~ 102 (263)
+|+|||+++..
T Consensus 69 ~DvVIn~a~~~ 79 (450)
T 1ff9_A 69 HDLVISLIPYT 79 (450)
T ss_dssp SSEEEECCC--
T ss_pred CcEEEECCccc
Confidence 89999999864
|
| >2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* | Back alignment and structure |
|---|
Probab=98.64 E-value=6e-09 Score=94.28 Aligned_cols=99 Identities=16% Similarity=0.144 Sum_probs=66.5
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
.++++|+++|||| ||+|++++..|++.|++|++++|+.++++++.+++ +..+. ++.+ + +.+
T Consensus 360 ~~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~---~~~~~----~~~d---l--------~~~ 420 (523)
T 2o7s_A 360 SPLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAI---GGKAL----SLTD---L--------DNY 420 (523)
T ss_dssp ------CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHT---TC-CE----ETTT---T--------TTC
T ss_pred cccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCcee----eHHH---h--------hhc
Confidence 3678999999999 59999999999999999999999998888877665 22222 2211 1 111
Q ss_pred -CCCccEEEeCCCCCCC-----CCCCCCCHHHHHHHHHhhhHhH
Q 024752 89 -DGKLNILINNAGTFIP-----KETTEFTEEDFSTVMTTNFESA 126 (263)
Q Consensus 89 -~~~id~li~~ag~~~~-----~~~~~~~~~~~~~~~~~n~~~~ 126 (263)
...+|++|||+|+... .++.+.+.++|...+++|+.+.
T Consensus 421 ~~~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~ 464 (523)
T 2o7s_A 421 HPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPR 464 (523)
T ss_dssp --CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSS
T ss_pred cccCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCc
Confidence 1358999999997542 3455556667777888888765
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=98.60 E-value=8.5e-08 Score=81.76 Aligned_cols=104 Identities=17% Similarity=0.246 Sum_probs=73.4
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
+|++++|||++||||+.+++.+...|++|++++|++++++.. +++ +.. ..+|.++.+++.+.+.++. .+.
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~---g~~---~~~d~~~~~~~~~~~~~~~---~~~ 214 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI---GFD---AAFNYKTVNSLEEALKKAS---PDG 214 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT---TCS---EEEETTSCSCHHHHHHHHC---TTC
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc---CCc---EEEecCCHHHHHHHHHHHh---CCC
Confidence 589999999999999999999999999999999998776655 333 332 2347776444555444443 247
Q ss_pred ccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccc
Q 024752 92 LNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAG 153 (263)
Q Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 153 (263)
+|++|+|+|. + .++..++.++. +|+++.++....
T Consensus 215 ~d~vi~~~g~-----------~---------------~~~~~~~~l~~--~G~~v~~g~~~~ 248 (333)
T 1v3u_A 215 YDCYFDNVGG-----------E---------------FLNTVLSQMKD--FGKIAICGAISV 248 (333)
T ss_dssp EEEEEESSCH-----------H---------------HHHHHHTTEEE--EEEEEECCCCC-
T ss_pred CeEEEECCCh-----------H---------------HHHHHHHHHhc--CCEEEEEecccc
Confidence 9999999992 0 12334444444 689999987543
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=4.2e-07 Score=76.63 Aligned_cols=86 Identities=17% Similarity=0.203 Sum_probs=66.6
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCC---chhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHH
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRN---ETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLME 82 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 82 (263)
..+++++|+++|+|+ ||+|++++..|++.|+ +|++++|+ .++++++++++..... +.....++.+.+++.+.+
T Consensus 148 ~~~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~-~~~~~~~~~~~~~l~~~l- 224 (315)
T 3tnl_A 148 AGHDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTD-CKAQLFDIEDHEQLRKEI- 224 (315)
T ss_dssp TTCCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSS-CEEEEEETTCHHHHHHHH-
T ss_pred cCCCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcC-CceEEeccchHHHHHhhh-
Confidence 457899999999998 7999999999999999 89999999 8888888888765322 223345666655554443
Q ss_pred HHHhhcCCCccEEEeCCCCC
Q 024752 83 TVSSQFDGKLNILINNAGTF 102 (263)
Q Consensus 83 ~~~~~~~~~id~li~~ag~~ 102 (263)
...|+|||+....
T Consensus 225 -------~~aDiIINaTp~G 237 (315)
T 3tnl_A 225 -------AESVIFTNATGVG 237 (315)
T ss_dssp -------HTCSEEEECSSTT
T ss_pred -------cCCCEEEECccCC
Confidence 3579999998754
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=98.57 E-value=1.7e-07 Score=79.60 Aligned_cols=104 Identities=15% Similarity=0.219 Sum_probs=72.0
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
.|++++|+||+|+||+.+++.+...|++|++++|++++.+...+ + +... ..|.++++..+.+.+.. . +..
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~---g~~~---~~~~~~~~~~~~~~~~~-~--~~~ 209 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A---GAWQ---VINYREEDLVERLKEIT-G--GKK 209 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H---TCSE---EEETTTSCHHHHHHHHT-T--TCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c---CCCE---EEECCCccHHHHHHHHh-C--CCC
Confidence 48999999999999999999999999999999999877655432 2 3322 24666554444333322 1 136
Q ss_pred ccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccc
Q 024752 92 LNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAG 153 (263)
Q Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 153 (263)
+|++|+|+|. . .++.+++.+++ +|+++.+++..+
T Consensus 210 ~D~vi~~~g~----~----------------------~~~~~~~~l~~--~G~iv~~g~~~~ 243 (327)
T 1qor_A 210 VRVVYDSVGR----D----------------------TWERSLDCLQR--RGLMVSFGNSSG 243 (327)
T ss_dssp EEEEEECSCG----G----------------------GHHHHHHTEEE--EEEEEECCCTTC
T ss_pred ceEEEECCch----H----------------------HHHHHHHHhcC--CCEEEEEecCCC
Confidence 9999999982 1 12444455544 689999987543
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=98.57 E-value=4.6e-07 Score=77.18 Aligned_cols=151 Identities=12% Similarity=0.128 Sum_probs=100.0
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCC-------eEEEeeCC----chhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHH
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGA-------IVHTCSRN----ETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLM 81 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 81 (263)
.++|+||||+|++|.+++..|+..|. .|.+++++ +++++....++........ .|++...+..+++
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~---~~i~~~~~~~~al 81 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLL---AGMTAHADPMTAF 81 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTE---EEEEEESSHHHHT
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhccccc---CcEEEecCcHHHh
Confidence 46899999999999999999999885 79999998 5556555555554211111 2443333333333
Q ss_pred HHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccc-------
Q 024752 82 ETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGV------- 154 (263)
Q Consensus 82 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~------- 154 (263)
...|++|+.||..... ..+. .+.+..|+.....+++.+..+- ...+++|++|.....
T Consensus 82 --------~~aD~Vi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~~~~--~p~a~ii~~SNPv~~~t~~~~~ 145 (329)
T 1b8p_A 82 --------KDADVALLVGARPRGP---GMER---KDLLEANAQIFTVQGKAIDAVA--SRNIKVLVVGNPANTNAYIAMK 145 (329)
T ss_dssp --------TTCSEEEECCCCCCCT---TCCH---HHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHH
T ss_pred --------CCCCEEEEeCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHhc--CCCeEEEEccCchHHHHHHHHH
Confidence 4679999999965321 1233 3467888888887777774431 135799999886531
Q ss_pred -c-cCCCCcchhhHHHHHHHHHHHHHHHHc
Q 024752 155 -I-AIPMCSIYASSKVAMNQLTKNLACEWA 182 (263)
Q Consensus 155 -~-~~~~~~~Y~~sK~a~~~~~~~~a~e~~ 182 (263)
. +.|....|+.++.--..+...++..+.
T Consensus 146 ~~~~~p~~~v~g~t~Ld~~r~~~~la~~lg 175 (329)
T 1b8p_A 146 SAPSLPAKNFTAMLRLDHNRALSQIAAKTG 175 (329)
T ss_dssp TCTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred HcCCCCHHHEEEeecHHHHHHHHHHHHHhC
Confidence 2 445555688887666667777777764
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.47 E-value=3.2e-07 Score=81.64 Aligned_cols=81 Identities=15% Similarity=0.110 Sum_probs=62.9
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHC-CCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAF-GAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
..++++|+++|+|+ |++|+++++.|++. |++|++++|+.++++++.++ ..+..+.+|+++.+++.++++
T Consensus 18 ~~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~-----~~~~~~~~D~~d~~~l~~~l~---- 87 (467)
T 2axq_A 18 EGRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP-----SGSKAISLDVTDDSALDKVLA---- 87 (467)
T ss_dssp -----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG-----GTCEEEECCTTCHHHHHHHHH----
T ss_pred ccCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh-----cCCcEEEEecCCHHHHHHHHc----
Confidence 45678899999997 99999999999998 78999999998887766543 125567789999888776653
Q ss_pred hcCCCccEEEeCCCCC
Q 024752 87 QFDGKLNILINNAGTF 102 (263)
Q Consensus 87 ~~~~~id~li~~ag~~ 102 (263)
.+|+|||+++..
T Consensus 88 ----~~DvVIn~tp~~ 99 (467)
T 2axq_A 88 ----DNDVVISLIPYT 99 (467)
T ss_dssp ----TSSEEEECSCGG
T ss_pred ----CCCEEEECCchh
Confidence 589999999864
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=98.46 E-value=1.4e-06 Score=77.33 Aligned_cols=110 Identities=15% Similarity=0.231 Sum_probs=75.7
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEec--cCC---------CHHHHHHH
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC--DLK---------IRAQREKL 80 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~--D~~---------~~~~~~~~ 80 (263)
.|++|+|+|++|+||..+++.+...|++|+++++++++++.+ + +.+........ |+. +.+++..+
T Consensus 220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~-~---~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (447)
T 4a0s_A 220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV-R---ALGCDLVINRAELGITDDIADDPRRVVETGRKL 295 (447)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-H---HTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-H---hcCCCEEEecccccccccccccccccchhhhHH
Confidence 589999999999999999999999999999999988776544 2 23443332222 221 23455566
Q ss_pred HHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccc
Q 024752 81 METVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAG 153 (263)
Q Consensus 81 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 153 (263)
.+++.+..+..+|++|+++|. +. ++..++.++. +|++|.+++..+
T Consensus 296 ~~~v~~~~g~g~Dvvid~~G~-----------~~---------------~~~~~~~l~~--~G~iv~~G~~~~ 340 (447)
T 4a0s_A 296 AKLVVEKAGREPDIVFEHTGR-----------VT---------------FGLSVIVARR--GGTVVTCGSSSG 340 (447)
T ss_dssp HHHHHHHHSSCCSEEEECSCH-----------HH---------------HHHHHHHSCT--TCEEEESCCTTC
T ss_pred HHHHHHHhCCCceEEEECCCc-----------hH---------------HHHHHHHHhc--CCEEEEEecCCC
Confidence 677777664579999999993 11 1333444433 689999987643
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=98.44 E-value=4.8e-07 Score=74.90 Aligned_cols=80 Identities=15% Similarity=0.309 Sum_probs=60.7
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
..++++|+++|+|+ ||+|+++++.|++.|++|++++|+.++++++.+++...+ .+. ..|+ ++ +.+
T Consensus 114 ~~~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~-~~~--~~~~---~~-------~~~- 178 (271)
T 1nyt_A 114 SFIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-SIQ--ALSM---DE-------LEG- 178 (271)
T ss_dssp TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-SEE--ECCS---GG-------GTT-
T ss_pred CcCcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccC-Cee--EecH---HH-------hcc-
Confidence 45789999999998 799999999999999999999999998888877664322 221 2332 11 111
Q ss_pred cCCCccEEEeCCCCCCC
Q 024752 88 FDGKLNILINNAGTFIP 104 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~ 104 (263)
+..|++|++++....
T Consensus 179 --~~~DivVn~t~~~~~ 193 (271)
T 1nyt_A 179 --HEFDLIINATSSGIS 193 (271)
T ss_dssp --CCCSEEEECCSCGGG
T ss_pred --CCCCEEEECCCCCCC
Confidence 478999999997643
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=98.39 E-value=1.2e-06 Score=74.57 Aligned_cols=80 Identities=16% Similarity=0.224 Sum_probs=58.2
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
.|++++|+||+|+||+.+++.+...|++|++++|++++++... ++ +... ..|.++.+..+.+.+.. . +..
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~---g~~~---~~d~~~~~~~~~i~~~~-~--~~~ 214 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR-KL---GCHH---TINYSTQDFAEVVREIT-G--GKG 214 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH---TCSE---EEETTTSCHHHHHHHHH-T--TCC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCCE---EEECCCHHHHHHHHHHh-C--CCC
Confidence 5899999999999999999999999999999999987766543 22 3322 24666544443333322 1 236
Q ss_pred ccEEEeCCCC
Q 024752 92 LNILINNAGT 101 (263)
Q Consensus 92 id~li~~ag~ 101 (263)
+|++|+|+|.
T Consensus 215 ~d~vi~~~g~ 224 (333)
T 1wly_A 215 VDVVYDSIGK 224 (333)
T ss_dssp EEEEEECSCT
T ss_pred CeEEEECCcH
Confidence 9999999994
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.38 E-value=1.5e-06 Score=64.34 Aligned_cols=75 Identities=15% Similarity=0.197 Sum_probs=59.5
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
+.++++|+|+ |.+|+++++.|.+.|++|++++++++..+...+ . .+.++..|.++++.+.++ . ..+
T Consensus 5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~--~~~~~~gd~~~~~~l~~~------~-~~~ 70 (141)
T 3llv_A 5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----E--GFDAVIADPTDESFYRSL------D-LEG 70 (141)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T--TCEEEECCTTCHHHHHHS------C-CTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----C--CCcEEECCCCCHHHHHhC------C-ccc
Confidence 4578999998 779999999999999999999999887665543 2 256778999998876654 1 146
Q ss_pred ccEEEeCCC
Q 024752 92 LNILINNAG 100 (263)
Q Consensus 92 id~li~~ag 100 (263)
.|++|.+.+
T Consensus 71 ~d~vi~~~~ 79 (141)
T 3llv_A 71 VSAVLITGS 79 (141)
T ss_dssp CSEEEECCS
T ss_pred CCEEEEecC
Confidence 899998877
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=1.2e-06 Score=75.30 Aligned_cols=79 Identities=19% Similarity=0.262 Sum_probs=57.8
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc-CC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF-DG 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~ 90 (263)
+|++++|+||+|+||..+++.+...|++|++++|++++++.. +++ +... .+|.++.+..+.+ .+.. +.
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~---g~~~---~~~~~~~~~~~~~----~~~~~~~ 230 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL---GAAA---GFNYKKEDFSEAT----LKFTKGA 230 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH---TCSE---EEETTTSCHHHHH----HHHTTTS
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCcE---EEecCChHHHHHH----HHHhcCC
Confidence 489999999999999999999999999999999998877655 333 3322 2465554333333 2222 13
Q ss_pred CccEEEeCCCC
Q 024752 91 KLNILINNAGT 101 (263)
Q Consensus 91 ~id~li~~ag~ 101 (263)
.+|++|+|+|.
T Consensus 231 ~~d~vi~~~G~ 241 (354)
T 2j8z_A 231 GVNLILDCIGG 241 (354)
T ss_dssp CEEEEEESSCG
T ss_pred CceEEEECCCc
Confidence 69999999994
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=98.33 E-value=2.7e-06 Score=70.73 Aligned_cols=83 Identities=13% Similarity=0.064 Sum_probs=62.1
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
..++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++++++......+.....+..+ +.+.+
T Consensus 122 ~~~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~---l~~~l----- 192 (283)
T 3jyo_A 122 LPNAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARG---IEDVI----- 192 (283)
T ss_dssp CTTCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTT---HHHHH-----
T ss_pred CcCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHH---HHHHH-----
Confidence 35789999999998 7999999999999999 79999999999999988886542222222334332 23322
Q ss_pred hcCCCccEEEeCCCCC
Q 024752 87 QFDGKLNILINNAGTF 102 (263)
Q Consensus 87 ~~~~~id~li~~ag~~ 102 (263)
...|+|||+...+
T Consensus 193 ---~~~DiVInaTp~G 205 (283)
T 3jyo_A 193 ---AAADGVVNATPMG 205 (283)
T ss_dssp ---HHSSEEEECSSTT
T ss_pred ---hcCCEEEECCCCC
Confidence 2469999998754
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=4.9e-07 Score=66.88 Aligned_cols=77 Identities=21% Similarity=0.234 Sum_probs=57.2
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
+++++++|+|+ |.+|+.+++.|.+.|++|++++|+++..+... ..+ ...+..|.++.+.+.++ .. .
T Consensus 4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~----~~~--~~~~~~d~~~~~~l~~~------~~-~ 69 (144)
T 2hmt_A 4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SYA--THAVIANATEENELLSL------GI-R 69 (144)
T ss_dssp --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT----TTC--SEEEECCTTCHHHHHTT------TG-G
T ss_pred CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HhC--CEEEEeCCCCHHHHHhc------CC-C
Confidence 46788999998 99999999999999999999999876654332 222 34567899887655433 12 4
Q ss_pred CccEEEeCCCC
Q 024752 91 KLNILINNAGT 101 (263)
Q Consensus 91 ~id~li~~ag~ 101 (263)
+.|++|++++.
T Consensus 70 ~~d~vi~~~~~ 80 (144)
T 2hmt_A 70 NFEYVIVAIGA 80 (144)
T ss_dssp GCSEEEECCCS
T ss_pred CCCEEEECCCC
Confidence 68999999884
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=9.4e-07 Score=75.98 Aligned_cols=104 Identities=15% Similarity=0.218 Sum_probs=71.0
Q ss_pred CC--CEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 12 KG--MTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 12 ~~--k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
.| ++++|+|++|+||+.+++.+...|+ +|+++++++++.+.+.+++ +.. ..+|.++.+ +.+. +.+..
T Consensus 158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~---g~~---~~~d~~~~~-~~~~---~~~~~ 227 (357)
T 2zb4_A 158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL---GFD---AAINYKKDN-VAEQ---LRESC 227 (357)
T ss_dssp TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS---CCS---EEEETTTSC-HHHH---HHHHC
T ss_pred CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc---CCc---eEEecCchH-HHHH---HHHhc
Confidence 36 9999999999999999999999999 9999999987766554322 332 224666533 2222 22222
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccc
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAG 153 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 153 (263)
.+.+|++|+|+|. + .++.+++.+++ +|+++.++....
T Consensus 228 ~~~~d~vi~~~G~-----------~---------------~~~~~~~~l~~--~G~iv~~G~~~~ 264 (357)
T 2zb4_A 228 PAGVDVYFDNVGG-----------N---------------ISDTVISQMNE--NSHIILCGQISQ 264 (357)
T ss_dssp TTCEEEEEESCCH-----------H---------------HHHHHHHTEEE--EEEEEECCCGGG
T ss_pred CCCCCEEEECCCH-----------H---------------HHHHHHHHhcc--CcEEEEECCccc
Confidence 2379999999992 1 12334455444 689999987543
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=98.32 E-value=9.5e-07 Score=75.54 Aligned_cols=104 Identities=13% Similarity=0.207 Sum_probs=72.4
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
+|++++|+|++|+||+.+++.+...|++|++++|++++++.+.++ .+... ..|.++.+++.+.+.++. ++.
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~---~g~~~---~~d~~~~~~~~~~~~~~~---~~~ 225 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTK---FGFDD---AFNYKEESDLTAALKRCF---PNG 225 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT---SCCSE---EEETTSCSCSHHHHHHHC---TTC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---cCCce---EEecCCHHHHHHHHHHHh---CCC
Confidence 589999999999999999999999999999999998776655322 23332 236655444444444432 246
Q ss_pred ccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccc
Q 024752 92 LNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVA 152 (263)
Q Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~ 152 (263)
+|++|+|+|. + .++..++.++. +|+++.++...
T Consensus 226 ~d~vi~~~g~-----------~---------------~~~~~~~~l~~--~G~~v~~G~~~ 258 (345)
T 2j3h_A 226 IDIYFENVGG-----------K---------------MLDAVLVNMNM--HGRIAVCGMIS 258 (345)
T ss_dssp EEEEEESSCH-----------H---------------HHHHHHTTEEE--EEEEEECCCGG
T ss_pred CcEEEECCCH-----------H---------------HHHHHHHHHhc--CCEEEEEcccc
Confidence 9999999982 0 13444455444 68999987654
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=98.32 E-value=1.6e-06 Score=73.82 Aligned_cols=104 Identities=13% Similarity=0.228 Sum_probs=72.0
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
+|++|+|+|++|+||..+++.+...|++|++++|++++.+.+.+++ +.... .|.++.+..+ .+.+..++.
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~---g~~~~---~~~~~~~~~~----~~~~~~~~~ 218 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL---GFDGA---IDYKNEDLAA----GLKRECPKG 218 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT---CCSEE---EETTTSCHHH----HHHHHCTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCCEE---EECCCHHHHH----HHHHhcCCC
Confidence 5899999999999999999999999999999999988776553332 33222 3555533222 222322357
Q ss_pred ccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccc
Q 024752 92 LNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAG 153 (263)
Q Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 153 (263)
+|++|+|+|. + .++.+++.+++ +|+++.++....
T Consensus 219 ~d~vi~~~g~-----------~---------------~~~~~~~~l~~--~G~iv~~G~~~~ 252 (336)
T 4b7c_A 219 IDVFFDNVGG-----------E---------------ILDTVLTRIAF--KARIVLCGAISQ 252 (336)
T ss_dssp EEEEEESSCH-----------H---------------HHHHHHTTEEE--EEEEEECCCGGG
T ss_pred ceEEEECCCc-----------c---------------hHHHHHHHHhh--CCEEEEEeeccc
Confidence 9999999983 0 12344444544 689999987653
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.32 E-value=1.9e-06 Score=73.71 Aligned_cols=104 Identities=16% Similarity=0.228 Sum_probs=71.1
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
.|++++|+|++|++|+.+++.+...|++|++++|++++.+... ++ +... ..|.++++ +.+.+.++.. +..
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~---ga~~---~~d~~~~~-~~~~~~~~~~--~~~ 235 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL---GADE---TVNYTHPD-WPKEVRRLTG--GKG 235 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH---TCSE---EEETTSTT-HHHHHHHHTT--TTC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc---CCCE---EEcCCccc-HHHHHHHHhC--CCC
Confidence 4899999999999999999999999999999999988776553 32 3322 24666543 2222222211 237
Q ss_pred ccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccc
Q 024752 92 LNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAG 153 (263)
Q Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 153 (263)
+|++|+++| .. . ++.+++.+++ +|+++.+++...
T Consensus 236 ~d~vi~~~g-~~-------~------------------~~~~~~~l~~--~G~~v~~g~~~~ 269 (343)
T 2eih_A 236 ADKVVDHTG-AL-------Y------------------FEGVIKATAN--GGRIAIAGASSG 269 (343)
T ss_dssp EEEEEESSC-SS-------S------------------HHHHHHHEEE--EEEEEESSCCCS
T ss_pred ceEEEECCC-HH-------H------------------HHHHHHhhcc--CCEEEEEecCCC
Confidence 999999999 21 1 2334444444 689999987643
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=98.31 E-value=2.3e-06 Score=72.54 Aligned_cols=103 Identities=15% Similarity=0.144 Sum_probs=70.2
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC-C
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD-G 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~ 90 (263)
.|++++|+||+|++|..+++.+...|++|+++++++++++... ++ +.... .|.++.+..+ ++.+..+ .
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~---Ga~~~---~~~~~~~~~~----~~~~~~~~~ 208 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-AL---GAWET---IDYSHEDVAK----RVLELTDGK 208 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH---TCSEE---EETTTSCHHH----HHHHHTTTC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCCEE---EeCCCccHHH----HHHHHhCCC
Confidence 4899999999999999999999999999999999988776443 32 33222 3444433222 2333222 3
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccc
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAG 153 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 153 (263)
.+|++|+|+|.. .++..++.+++ +|+++.++...+
T Consensus 209 g~Dvvid~~g~~--------------------------~~~~~~~~l~~--~G~iv~~g~~~~ 243 (325)
T 3jyn_A 209 KCPVVYDGVGQD--------------------------TWLTSLDSVAP--RGLVVSFGNASG 243 (325)
T ss_dssp CEEEEEESSCGG--------------------------GHHHHHTTEEE--EEEEEECCCTTC
T ss_pred CceEEEECCChH--------------------------HHHHHHHHhcC--CCEEEEEecCCC
Confidence 699999999941 12333444444 689999987543
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=98.31 E-value=2.8e-06 Score=72.36 Aligned_cols=102 Identities=16% Similarity=0.179 Sum_probs=69.3
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc-CC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF-DG 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~ 90 (263)
+|++++|+||+|++|..+++.+...|++|+++++++++++.. ++ .+.... .|.++++..+ ++.+.. +.
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~---~ga~~~---~~~~~~~~~~----~~~~~~~~~ 216 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA-KE---YGAEYL---INASKEDILR----QVLKFTNGK 216 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HH---TTCSEE---EETTTSCHHH----HHHHHTTTS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HH---cCCcEE---EeCCCchHHH----HHHHHhCCC
Confidence 589999999999999999999999999999999998876633 33 343322 3444432222 222222 23
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccc
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVA 152 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~ 152 (263)
.+|++|+|+|.. .++.+++.++. +|+++.++...
T Consensus 217 g~D~vid~~g~~--------------------------~~~~~~~~l~~--~G~iv~~G~~~ 250 (334)
T 3qwb_A 217 GVDASFDSVGKD--------------------------TFEISLAALKR--KGVFVSFGNAS 250 (334)
T ss_dssp CEEEEEECCGGG--------------------------GHHHHHHHEEE--EEEEEECCCTT
T ss_pred CceEEEECCChH--------------------------HHHHHHHHhcc--CCEEEEEcCCC
Confidence 699999999941 12334444444 68999998654
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=98.31 E-value=2.4e-06 Score=73.36 Aligned_cols=78 Identities=19% Similarity=0.286 Sum_probs=56.9
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC-C
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD-G 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~ 90 (263)
.|++++|+|++|+||..+++.+...|++|++++|++++.+.. ++ .+... ..|.++++..+.+ .+..+ .
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~---~ga~~---~~d~~~~~~~~~~----~~~~~~~ 238 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQ---NGAHE---VFNHREVNYIDKI----KKYVGEK 238 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HH---TTCSE---EEETTSTTHHHHH----HHHHCTT
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HH---cCCCE---EEeCCCchHHHHH----HHHcCCC
Confidence 489999999999999999999999999999999998876632 22 33332 2466654433333 22222 3
Q ss_pred CccEEEeCCC
Q 024752 91 KLNILINNAG 100 (263)
Q Consensus 91 ~id~li~~ag 100 (263)
.+|++|+|+|
T Consensus 239 ~~D~vi~~~G 248 (351)
T 1yb5_A 239 GIDIIIEMLA 248 (351)
T ss_dssp CEEEEEESCH
T ss_pred CcEEEEECCC
Confidence 6999999998
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=98.30 E-value=1.9e-05 Score=66.96 Aligned_cols=120 Identities=13% Similarity=0.105 Sum_probs=75.2
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCC--CeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
.++++||||+|.+|..++..|++.| ..|++++++++ +....++......... .. ++..++..+++ .
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v-~~-~~~t~d~~~al--------~ 75 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVV-RG-FLGQQQLEAAL--------T 75 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEE-EE-EESHHHHHHHH--------T
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceE-EE-EeCCCCHHHHc--------C
Confidence 3579999999999999999999998 68999998876 3333344432211111 11 22344444443 4
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccc
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAG 153 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 153 (263)
..|++|++||...... .+. ...+..|+.....+++.+.+. ...+.++++|-...
T Consensus 76 gaDvVi~~ag~~~~~g---~~r---~dl~~~N~~~~~~i~~~i~~~---~p~~~viv~SNPv~ 129 (326)
T 1smk_A 76 GMDLIIVPAGVPRKPG---MTR---DDLFKINAGIVKTLCEGIAKC---CPRAIVNLISNPVN 129 (326)
T ss_dssp TCSEEEECCCCCCCSS---CCC---SHHHHHHHHHHHHHHHHHHHH---CTTSEEEECCSSHH
T ss_pred CCCEEEEcCCcCCCCC---CCH---HHHHHHHHHHHHHHHHHHHhh---CCCeEEEEECCchH
Confidence 6899999999653221 121 244788888888888777443 22345555444433
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=2.7e-06 Score=73.42 Aligned_cols=99 Identities=22% Similarity=0.264 Sum_probs=68.0
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc---hhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE---TELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
++|++|+|+|+ |++|..+++.+...|++|+++++++ ++.+. ++++ +. ..+ | ++ ++.+.+.+ .
T Consensus 179 ~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~~~~---ga--~~v--~-~~--~~~~~~~~---~ 243 (366)
T 2cdc_A 179 LNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTV-IEET---KT--NYY--N-SS--NGYDKLKD---S 243 (366)
T ss_dssp STTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHH-HHHH---TC--EEE--E-CT--TCSHHHHH---H
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHH-HHHh---CC--cee--c-hH--HHHHHHHH---h
Confidence 44999999999 9999999999999999999999988 66533 3333 32 222 5 44 22222222 1
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHH-HHHhHHHhhCCCceEEEEcccc
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS-QLAHPLLKSAGNGNIIFISSVA 152 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~-~~~~~~~~~~~~~~iv~vsS~~ 152 (263)
. +.+|++|+++|... .+ +.+++.|++ +|++|+++...
T Consensus 244 ~-~~~d~vid~~g~~~-------------------------~~~~~~~~~l~~--~G~iv~~g~~~ 281 (366)
T 2cdc_A 244 V-GKFDVIIDATGADV-------------------------NILGNVIPLLGR--NGVLGLFGFST 281 (366)
T ss_dssp H-CCEEEEEECCCCCT-------------------------HHHHHHGGGEEE--EEEEEECSCCC
T ss_pred C-CCCCEEEECCCChH-------------------------HHHHHHHHHHhc--CCEEEEEecCC
Confidence 1 57999999999521 22 555666654 58999997643
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=98.23 E-value=7.6e-06 Score=68.85 Aligned_cols=86 Identities=16% Similarity=0.148 Sum_probs=63.2
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCC---chhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHH
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRN---ETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLME 82 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 82 (263)
..+++++|+++|+|+ ||.|++++..|++.|+ +|.++.|+ .++++++++++..... +.....++.+.+...+.+
T Consensus 142 ~~~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~-~~v~~~~~~~l~~~~~~l- 218 (312)
T 3t4e_A 142 SGFDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTD-CVVTVTDLADQHAFTEAL- 218 (312)
T ss_dssp TTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSS-CEEEEEETTCHHHHHHHH-
T ss_pred cCCCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccC-cceEEechHhhhhhHhhc-
Confidence 357889999999997 8999999999999999 89999999 8888888887765322 222234555533222222
Q ss_pred HHHhhcCCCccEEEeCCCCC
Q 024752 83 TVSSQFDGKLNILINNAGTF 102 (263)
Q Consensus 83 ~~~~~~~~~id~li~~ag~~ 102 (263)
...|+|||+....
T Consensus 219 -------~~~DiIINaTp~G 231 (312)
T 3t4e_A 219 -------ASADILTNGTKVG 231 (312)
T ss_dssp -------HHCSEEEECSSTT
T ss_pred -------cCceEEEECCcCC
Confidence 2469999997765
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=98.22 E-value=1e-05 Score=66.85 Aligned_cols=80 Identities=13% Similarity=0.250 Sum_probs=59.4
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
.+++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++...+ .+.. .|+ ++ +.+
T Consensus 114 ~~~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~-~~~~--~~~---~~-------~~~- 178 (272)
T 1p77_A 114 NWLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG-NIQA--VSM---DS-------IPL- 178 (272)
T ss_dssp TCCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS-CEEE--EEG---GG-------CCC-
T ss_pred CCCcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccC-CeEE--eeH---HH-------hcc-
Confidence 46789999999998 799999999999999999999999999888887765422 2222 232 11 101
Q ss_pred cCCCccEEEeCCCCCCC
Q 024752 88 FDGKLNILINNAGTFIP 104 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~ 104 (263)
+..|++|++++....
T Consensus 179 --~~~DivIn~t~~~~~ 193 (272)
T 1p77_A 179 --QTYDLVINATSAGLS 193 (272)
T ss_dssp --SCCSEEEECCCC---
T ss_pred --CCCCEEEECCCCCCC
Confidence 368999999997643
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=7.9e-06 Score=70.39 Aligned_cols=103 Identities=17% Similarity=0.261 Sum_probs=69.5
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
.|++++|+||+|++|..+++.+...|++|+++++++++.+... +.+.... .|.++. ++.+.+. +..++.
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~----~~Ga~~~---~~~~~~-~~~~~~~---~~~~~g 231 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK----SLGCDRP---INYKTE-PVGTVLK---QEYPEG 231 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTTCSEE---EETTTS-CHHHHHH---HHCTTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH----HcCCcEE---EecCCh-hHHHHHH---HhcCCC
Confidence 5899999999999999999999999999999999987665443 2343322 244332 2222232 222346
Q ss_pred ccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccc
Q 024752 92 LNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAG 153 (263)
Q Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 153 (263)
+|++|+++|. + .++.+++.+++ +|+++.+++..+
T Consensus 232 ~D~vid~~g~-----------~---------------~~~~~~~~l~~--~G~iv~~g~~~~ 265 (362)
T 2c0c_A 232 VDVVYESVGG-----------A---------------MFDLAVDALAT--KGRLIVIGFISG 265 (362)
T ss_dssp EEEEEECSCT-----------H---------------HHHHHHHHEEE--EEEEEECCCGGG
T ss_pred CCEEEECCCH-----------H---------------HHHHHHHHHhc--CCEEEEEeCCCC
Confidence 9999999982 1 12334444444 689999987654
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=98.19 E-value=1.6e-05 Score=70.66 Aligned_cols=85 Identities=13% Similarity=0.143 Sum_probs=63.2
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEec--c--------CCCHHHHHHHH
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC--D--------LKIRAQREKLM 81 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~--D--------~~~~~~~~~~~ 81 (263)
.|++|+|+|++|++|...++.+...|++|+++++++++++.+ +++ |........ | .++.++.+++.
T Consensus 228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~l---Ga~~vi~~~~~d~~~~~~~~~~~~~~~~~~~ 303 (456)
T 3krt_A 228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAM---GAEAIIDRNAEGYRFWKDENTQDPKEWKRFG 303 (456)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHH---TCCEEEETTTTTCCSEEETTEECHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-Hhh---CCcEEEecCcCcccccccccccchHHHHHHH
Confidence 489999999999999999999999999999999988776544 333 333222211 1 24566777777
Q ss_pred HHHHhhcC-CCccEEEeCCC
Q 024752 82 ETVSSQFD-GKLNILINNAG 100 (263)
Q Consensus 82 ~~~~~~~~-~~id~li~~ag 100 (263)
+++.+..+ ..+|++|.++|
T Consensus 304 ~~i~~~t~g~g~Dvvid~~G 323 (456)
T 3krt_A 304 KRIRELTGGEDIDIVFEHPG 323 (456)
T ss_dssp HHHHHHHTSCCEEEEEECSC
T ss_pred HHHHHHhCCCCCcEEEEcCC
Confidence 77777653 37999999998
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=1e-05 Score=69.21 Aligned_cols=104 Identities=14% Similarity=0.220 Sum_probs=70.0
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHC-CCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAF-GAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
.|++++|+|++|+||+.+++.+... |++|+++++++++.+.. +++ +.... .|.++.+..+. +.++... +
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~-~~~---g~~~~---~~~~~~~~~~~-~~~~~~~--~ 239 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA-KRA---GADYV---INASMQDPLAE-IRRITES--K 239 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH-HHH---TCSEE---EETTTSCHHHH-HHHHTTT--S
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh---CCCEE---ecCCCccHHHH-HHHHhcC--C
Confidence 5899999999999999999999999 99999999998776654 333 33322 35555333222 2222111 4
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccc
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVA 152 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~ 152 (263)
.+|++|+|+|.. ..++..++.++. +|+++.++...
T Consensus 240 ~~d~vi~~~g~~-------------------------~~~~~~~~~l~~--~G~iv~~g~~~ 274 (347)
T 1jvb_A 240 GVDAVIDLNNSE-------------------------KTLSVYPKALAK--QGKYVMVGLFG 274 (347)
T ss_dssp CEEEEEESCCCH-------------------------HHHTTGGGGEEE--EEEEEECCSSC
T ss_pred CceEEEECCCCH-------------------------HHHHHHHHHHhc--CCEEEEECCCC
Confidence 799999999941 123444455444 68999987643
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=98.11 E-value=3.5e-05 Score=65.94 Aligned_cols=79 Identities=11% Similarity=0.082 Sum_probs=55.3
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
+++++|+||+|++|..+++.+...|++|+++++++++.+.+. ++ +.... .|..+++ ..+.+.++... ..+
T Consensus 165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~---Ga~~~---~~~~~~~-~~~~v~~~~~~--~g~ 234 (349)
T 3pi7_A 165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DI---GAAHV---LNEKAPD-FEATLREVMKA--EQP 234 (349)
T ss_dssp CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HH---TCSEE---EETTSTT-HHHHHHHHHHH--HCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCCEE---EECCcHH-HHHHHHHHhcC--CCC
Confidence 489999999999999999999999999999999998876553 32 33322 2444432 22222222221 369
Q ss_pred cEEEeCCCC
Q 024752 93 NILINNAGT 101 (263)
Q Consensus 93 d~li~~ag~ 101 (263)
|++++++|.
T Consensus 235 D~vid~~g~ 243 (349)
T 3pi7_A 235 RIFLDAVTG 243 (349)
T ss_dssp CEEEESSCH
T ss_pred cEEEECCCC
Confidence 999999983
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.06 E-value=2.8e-05 Score=56.98 Aligned_cols=75 Identities=16% Similarity=0.170 Sum_probs=55.8
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
++.++|+|+ |.+|+.+++.|.+.|++|++++|+++..+...++ . .+..+..|.++++.+.+. .. .+.
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~---~--~~~~~~~d~~~~~~l~~~------~~-~~~ 70 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE---I--DALVINGDCTKIKTLEDA------GI-EDA 70 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---C--SSEEEESCTTSHHHHHHT------TT-TTC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh---c--CcEEEEcCCCCHHHHHHc------Cc-ccC
Confidence 467899987 9999999999999999999999998766554322 1 244567888887664331 12 468
Q ss_pred cEEEeCCC
Q 024752 93 NILINNAG 100 (263)
Q Consensus 93 d~li~~ag 100 (263)
|++|.+.+
T Consensus 71 d~vi~~~~ 78 (140)
T 1lss_A 71 DMYIAVTG 78 (140)
T ss_dssp SEEEECCS
T ss_pred CEEEEeeC
Confidence 99999975
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=98.06 E-value=1.2e-05 Score=68.54 Aligned_cols=79 Identities=16% Similarity=0.142 Sum_probs=56.5
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC-C
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD-G 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~ 90 (263)
+|++|+|+|+++++|..+++.+...|++|+++++++++.+.+.+ + +.... .|.++.+..+ ++.+..+ .
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l---ga~~~---~~~~~~~~~~----~~~~~~~~~ 212 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-L---GAAYV---IDTSTAPLYE----TVMELTNGI 212 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H---TCSEE---EETTTSCHHH----HHHHHTTTS
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-C---CCcEE---EeCCcccHHH----HHHHHhCCC
Confidence 48999999999999999999999999999999999988765532 2 33322 2444432222 2222222 3
Q ss_pred CccEEEeCCCC
Q 024752 91 KLNILINNAGT 101 (263)
Q Consensus 91 ~id~li~~ag~ 101 (263)
.+|++|+|+|.
T Consensus 213 g~Dvvid~~g~ 223 (340)
T 3gms_A 213 GADAAIDSIGG 223 (340)
T ss_dssp CEEEEEESSCH
T ss_pred CCcEEEECCCC
Confidence 69999999994
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.06 E-value=1.6e-05 Score=68.20 Aligned_cols=79 Identities=20% Similarity=0.340 Sum_probs=57.3
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
.|++|+|+||+|+||..+++.+...|++|+++++++++.+... ++ +.... .|.++++..+.+. +.. ++.
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~~~---~~~~~~~~~~~~~-~~~---~~g 235 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RL---GAKRG---INYRSEDFAAVIK-AET---GQG 235 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH---TCSEE---EETTTSCHHHHHH-HHH---SSC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc---CCCEE---EeCCchHHHHHHH-HHh---CCC
Confidence 5899999999999999999999999999999999988776543 22 33322 3444433333322 222 367
Q ss_pred ccEEEeCCCC
Q 024752 92 LNILINNAGT 101 (263)
Q Consensus 92 id~li~~ag~ 101 (263)
+|++|+|+|.
T Consensus 236 ~Dvvid~~g~ 245 (353)
T 4dup_A 236 VDIILDMIGA 245 (353)
T ss_dssp EEEEEESCCG
T ss_pred ceEEEECCCH
Confidence 9999999994
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=98.05 E-value=5.6e-06 Score=70.75 Aligned_cols=78 Identities=22% Similarity=0.317 Sum_probs=55.6
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC-
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG- 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~- 90 (263)
.|++|+|+|++|+||..+++.+...|++|+++++++++.+... ++ +.... .|.. +++. +++.+..++
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~---ga~~v---~~~~--~~~~---~~v~~~~~~~ 226 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVK-SV---GADIV---LPLE--EGWA---KAVREATGGA 226 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HH---TCSEE---EESS--TTHH---HHHHHHTTTS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc---CCcEE---ecCc--hhHH---HHHHHHhCCC
Confidence 5899999999999999999999999999999999988875443 33 33322 2333 2222 333333323
Q ss_pred CccEEEeCCCC
Q 024752 91 KLNILINNAGT 101 (263)
Q Consensus 91 ~id~li~~ag~ 101 (263)
.+|++|+++|.
T Consensus 227 g~Dvvid~~g~ 237 (342)
T 4eye_A 227 GVDMVVDPIGG 237 (342)
T ss_dssp CEEEEEESCC-
T ss_pred CceEEEECCch
Confidence 69999999994
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=98.05 E-value=8.7e-06 Score=68.21 Aligned_cols=79 Identities=18% Similarity=0.212 Sum_probs=58.3
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
+++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++++++.+++...... . .+.+++ .+.
T Consensus 137 ~~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~--~-----~~~~~~-------~~~ 201 (297)
T 2egg_A 137 ITLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSA--Y-----FSLAEA-------ETR 201 (297)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCC--E-----ECHHHH-------HHT
T ss_pred CCCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCc--e-----eeHHHH-------Hhh
Confidence 5789999999998 7899999999999998 8999999999888877664221101 1 111222 222
Q ss_pred cCCCccEEEeCCCCCC
Q 024752 88 FDGKLNILINNAGTFI 103 (263)
Q Consensus 88 ~~~~id~li~~ag~~~ 103 (263)
. ...|+||++.+...
T Consensus 202 ~-~~aDivIn~t~~~~ 216 (297)
T 2egg_A 202 L-AEYDIIINTTSVGM 216 (297)
T ss_dssp G-GGCSEEEECSCTTC
T ss_pred h-ccCCEEEECCCCCC
Confidence 2 46899999998764
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=98.04 E-value=3.9e-05 Score=64.74 Aligned_cols=146 Identities=11% Similarity=0.083 Sum_probs=90.5
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC--eEEEeeC--CchhHHHHHHHHHhc----CCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGA--IVHTCSR--NETELNQRIQEWKSK----GLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r--~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
+++||||+|++|.+++..|+..|. .+.++++ ++++++....++... +.++.....| +++.+
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~------- 70 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLR------- 70 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGG-------
T ss_pred EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHH-------
Confidence 689999999999999999998885 5888998 665454433333321 1122221111 01111
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccc--------ccCC
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGV--------IAIP 158 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~--------~~~~ 158 (263)
.+ ...|++|+.||..... ..+. ...+..|+-....+++++..+ .++.++++|..... .+.|
T Consensus 71 al-~gaD~Vi~~Ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~~~----~~~~vlv~SNPv~~~t~~~~k~~~~p 139 (313)
T 1hye_A 71 II-DESDVVIITSGVPRKE---GMSR---MDLAKTNAKIVGKYAKKIAEI----CDTKIFVITNPVDVMTYKALVDSKFE 139 (313)
T ss_dssp GG-TTCSEEEECCSCCCCT---TCCH---HHHHHHHHHHHHHHHHHHHHH----CCCEEEECSSSHHHHHHHHHHHHCCC
T ss_pred Hh-CCCCEEEECCCCCCCC---CCcH---HHHHHHHHHHHHHHHHHHHHh----CCeEEEEecCcHHHHHHHHHHhhCcC
Confidence 22 4689999999975321 1232 456899998888888887443 33455555554432 2355
Q ss_pred CCcchhh-HHHHHHHHHHHHHHHHc
Q 024752 159 MCSIYAS-SKVAMNQLTKNLACEWA 182 (263)
Q Consensus 159 ~~~~Y~~-sK~a~~~~~~~~a~e~~ 182 (263)
....++. +..-...+...++..+.
T Consensus 140 ~~rviG~gt~LD~~r~~~~la~~lg 164 (313)
T 1hye_A 140 RNQVFGLGTHLDSLRFKVAIAKFFG 164 (313)
T ss_dssp TTSEEECTTHHHHHHHHHHHHHHHT
T ss_pred hhcEEEeCccHHHHHHHHHHHHHhC
Confidence 5566777 66556666667777664
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=98.03 E-value=2.9e-05 Score=64.37 Aligned_cols=78 Identities=21% Similarity=0.258 Sum_probs=60.5
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
..+++++|+++|+|+ ||+|++++..|++.|+ +|.+++|+.++.+++.+++...+ .+.....+ + +
T Consensus 120 ~~~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~-~~~~~~~~--~---l-------- 184 (281)
T 3o8q_A 120 QQVLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG-EVKAQAFE--Q---L-------- 184 (281)
T ss_dssp TTCCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS-CEEEEEGG--G---C--------
T ss_pred hCCCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC-CeeEeeHH--H---h--------
Confidence 456789999999998 7999999999999997 89999999999999888876533 23333221 1 0
Q ss_pred hhcCCCccEEEeCCCCC
Q 024752 86 SQFDGKLNILINNAGTF 102 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~ 102 (263)
....|+|||+....
T Consensus 185 ---~~~aDiIInaTp~g 198 (281)
T 3o8q_A 185 ---KQSYDVIINSTSAS 198 (281)
T ss_dssp ---CSCEEEEEECSCCC
T ss_pred ---cCCCCEEEEcCcCC
Confidence 03579999998765
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=98.02 E-value=9.2e-05 Score=62.11 Aligned_cols=144 Identities=10% Similarity=-0.022 Sum_probs=84.9
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC--eEEEeeC--CchhHHHHHHHHHhc---CCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGA--IVHTCSR--NETELNQRIQEWKSK---GLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r--~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
+++||||+|++|.+++..|+..|. .+.++++ ++++++....++... ..++.... + +.+ .
T Consensus 2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~-----------a 67 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYE-----------D 67 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGG-----------G
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHH-----------H
Confidence 689999999999999999998886 6888999 776555444444432 22222222 2 111 1
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccc--------ccCCC
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGV--------IAIPM 159 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~--------~~~~~ 159 (263)
+ ...|++|+.||..... ..+. ...+..|+-....+++.+..+ ...+.++++|..... .+.|.
T Consensus 68 ~-~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~~~---~p~~~viv~SNPv~~~~~~~~~~~~~p~ 137 (303)
T 1o6z_A 68 T-AGSDVVVITAGIPRQP---GQTR---IDLAGDNAPIMEDIQSSLDEH---NDDYISLTTSNPVDLLNRHLYEAGDRSR 137 (303)
T ss_dssp G-TTCSEEEECCCCCCCT---TCCH---HHHHHHHHHHHHHHHHHHHTT---CSCCEEEECCSSHHHHHHHHHHHSSSCG
T ss_pred h-CCCCEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHH---CCCcEEEEeCChHHHHHHHHHHHcCCCH
Confidence 2 4689999999965321 1233 345888988888888777332 223455554443322 12343
Q ss_pred Ccchhh-HHHHHHHHHHHHHHHHc
Q 024752 160 CSIYAS-SKVAMNQLTKNLACEWA 182 (263)
Q Consensus 160 ~~~Y~~-sK~a~~~~~~~~a~e~~ 182 (263)
....+. +-.=...+-..++..+.
T Consensus 138 ~rviG~gt~Ld~~r~~~~la~~l~ 161 (303)
T 1o6z_A 138 EQVIGFGGRLDSARFRYVLSEEFD 161 (303)
T ss_dssp GGEEECCHHHHHHHHHHHHHHHHT
T ss_pred HHeeecccchhHHHHHHHHHHHhC
Confidence 344444 33223444555555553
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.01 E-value=5.4e-05 Score=56.70 Aligned_cols=78 Identities=14% Similarity=0.066 Sum_probs=58.3
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc-hhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE-TELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
..+.++|.|+ |.+|+.+++.|.+.|++|+++++++ +..+...... ...+.++..|.++++.+.++- . .
T Consensus 2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~---~~~~~~i~gd~~~~~~l~~a~------i-~ 70 (153)
T 1id1_A 2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL---GDNADVIPGDSNDSSVLKKAG------I-D 70 (153)
T ss_dssp CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH---CTTCEEEESCTTSHHHHHHHT------T-T
T ss_pred CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh---cCCCeEEEcCCCCHHHHHHcC------h-h
Confidence 4577888886 9999999999999999999999984 4444433222 123677889999988765541 1 4
Q ss_pred CccEEEeCCC
Q 024752 91 KLNILINNAG 100 (263)
Q Consensus 91 ~id~li~~ag 100 (263)
+.|.+|.+.+
T Consensus 71 ~ad~vi~~~~ 80 (153)
T 1id1_A 71 RCRAILALSD 80 (153)
T ss_dssp TCSEEEECSS
T ss_pred hCCEEEEecC
Confidence 6899998876
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=98.00 E-value=3.5e-05 Score=65.63 Aligned_cols=101 Identities=18% Similarity=0.197 Sum_probs=68.9
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
.|++|+|+|+ |++|..+++.+...|++|++++|++++.+... + .+... ..|.++++ +.+. +.+.. +.
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~---lGa~~---~~d~~~~~-~~~~---~~~~~-~~ 230 (339)
T 1rjw_A 164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-E---LGADL---VVNPLKED-AAKF---MKEKV-GG 230 (339)
T ss_dssp TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-H---TTCSE---EECTTTSC-HHHH---HHHHH-SS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-H---CCCCE---EecCCCcc-HHHH---HHHHh-CC
Confidence 4899999999 88999999999999999999999988776442 2 33332 24655432 2222 22222 47
Q ss_pred ccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccc
Q 024752 92 LNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVA 152 (263)
Q Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~ 152 (263)
+|++|+++|.. + .++..++.+++ +|+++.+++..
T Consensus 231 ~d~vid~~g~~----------~---------------~~~~~~~~l~~--~G~~v~~g~~~ 264 (339)
T 1rjw_A 231 VHAAVVTAVSK----------P---------------AFQSAYNSIRR--GGACVLVGLPP 264 (339)
T ss_dssp EEEEEESSCCH----------H---------------HHHHHHHHEEE--EEEEEECCCCS
T ss_pred CCEEEECCCCH----------H---------------HHHHHHHHhhc--CCEEEEecccC
Confidence 99999999841 1 23444455544 68999998754
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=1.7e-05 Score=68.33 Aligned_cols=99 Identities=21% Similarity=0.272 Sum_probs=68.9
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
.|++|+|+|+ |++|..+++.+...|++|+++++++++.+...++ .+... ..|..+.+.+. +.. +.
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~---lGa~~---v~~~~~~~~~~-------~~~-~~ 251 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKN---FGADS---FLVSRDQEQMQ-------AAA-GT 251 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHT---SCCSE---EEETTCHHHHH-------HTT-TC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---cCCce---EEeccCHHHHH-------Hhh-CC
Confidence 6899999996 9999999999999999999999998877655433 33332 23555543322 222 47
Q ss_pred ccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccc
Q 024752 92 LNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVA 152 (263)
Q Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~ 152 (263)
+|++|.++|... .++..++.+++ +|+++.+++..
T Consensus 252 ~D~vid~~g~~~-------------------------~~~~~~~~l~~--~G~iv~~g~~~ 285 (366)
T 1yqd_A 252 LDGIIDTVSAVH-------------------------PLLPLFGLLKS--HGKLILVGAPE 285 (366)
T ss_dssp EEEEEECCSSCC-------------------------CSHHHHHHEEE--EEEEEECCCCS
T ss_pred CCEEEECCCcHH-------------------------HHHHHHHHHhc--CCEEEEEccCC
Confidence 999999998531 11233444444 68999998754
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=97.95 E-value=5.2e-05 Score=65.61 Aligned_cols=106 Identities=16% Similarity=0.119 Sum_probs=72.3
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
++++++++|+|+ |+||+.+++.+...|++|++++|++++++...+.+ +..+ ..+.++.+++.+.+
T Consensus 165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~---g~~~---~~~~~~~~~l~~~l-------- 229 (377)
T 2vhw_A 165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF---CGRI---HTRYSSAYELEGAV-------- 229 (377)
T ss_dssp TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TTSS---EEEECCHHHHHHHH--------
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc---CCee---EeccCCHHHHHHHH--------
Confidence 588999999998 99999999999999999999999998776654332 2222 12344555554443
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccc
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSV 151 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~ 151 (263)
...|++|++++...... . ..+.+..++.|++ ++.||++++.
T Consensus 230 ~~aDvVi~~~~~p~~~t----~---------------~li~~~~l~~mk~--g~~iV~va~~ 270 (377)
T 2vhw_A 230 KRADLVIGAVLVPGAKA----P---------------KLVSNSLVAHMKP--GAVLVDIAID 270 (377)
T ss_dssp HHCSEEEECCCCTTSCC----C---------------CCBCHHHHTTSCT--TCEEEEGGGG
T ss_pred cCCCEEEECCCcCCCCC----c---------------ceecHHHHhcCCC--CcEEEEEecC
Confidence 24799999988643211 0 1112444555543 6789999854
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=97.87 E-value=0.00025 Score=60.84 Aligned_cols=83 Identities=17% Similarity=0.113 Sum_probs=58.2
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCe-EEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAI-VHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
.|++|||.|+ |++|...++.....|++ |+++++++++.+... ++ . ..+.....|-.+.+++.+.+.++.. +.
T Consensus 179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-~--~~~~~~~~~~~~~~~~~~~v~~~t~--g~ 251 (363)
T 3m6i_A 179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAK-EI-C--PEVVTHKVERLSAEESAKKIVESFG--GI 251 (363)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH-HH-C--TTCEEEECCSCCHHHHHHHHHHHTS--SC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-c--hhcccccccccchHHHHHHHHHHhC--CC
Confidence 4889999998 99999999998899997 999999988766443 43 2 2333344454555554444433321 24
Q ss_pred CccEEEeCCCC
Q 024752 91 KLNILINNAGT 101 (263)
Q Consensus 91 ~id~li~~ag~ 101 (263)
.+|++|.++|.
T Consensus 252 g~Dvvid~~g~ 262 (363)
T 3m6i_A 252 EPAVALECTGV 262 (363)
T ss_dssp CCSEEEECSCC
T ss_pred CCCEEEECCCC
Confidence 69999999983
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.87 E-value=3.9e-05 Score=66.14 Aligned_cols=77 Identities=18% Similarity=0.148 Sum_probs=58.7
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
|+-+.++|+|.|| |++|+.+++.|++ ..+|.+.+|+.+.+++.. ..+..+.+|++|.+++.+++
T Consensus 12 ~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~-------~~~~~~~~d~~d~~~l~~~~------- 75 (365)
T 3abi_A 12 IEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK-------EFATPLKVDASNFDKLVEVM------- 75 (365)
T ss_dssp ----CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT-------TTSEEEECCTTCHHHHHHHH-------
T ss_pred ccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh-------ccCCcEEEecCCHHHHHHHH-------
Confidence 3344457999998 9999999998865 578999999988776553 23567789999999888776
Q ss_pred CCCccEEEeCCCCC
Q 024752 89 DGKLNILINNAGTF 102 (263)
Q Consensus 89 ~~~id~li~~ag~~ 102 (263)
.+.|+||++++..
T Consensus 76 -~~~DvVi~~~p~~ 88 (365)
T 3abi_A 76 -KEFELVIGALPGF 88 (365)
T ss_dssp -TTCSEEEECCCGG
T ss_pred -hCCCEEEEecCCc
Confidence 3579999998753
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=97.86 E-value=9.6e-05 Score=63.12 Aligned_cols=102 Identities=14% Similarity=0.161 Sum_probs=68.4
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC-
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD- 89 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~- 89 (263)
.|++|+|+|+ |++|..+++.+...|+ +|+++++++++.+... ++ +.... .|..+++ +. +++.+..+
T Consensus 167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~---Ga~~~---~~~~~~~-~~---~~v~~~~~g 234 (348)
T 2d8a_A 167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KV---GADYV---INPFEED-VV---KEVMDITDG 234 (348)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HH---TCSEE---ECTTTSC-HH---HHHHHHTTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh---CCCEE---ECCCCcC-HH---HHHHHHcCC
Confidence 7899999999 9999999999999999 8999999987665443 33 33211 2444322 22 22333222
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccc
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVA 152 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~ 152 (263)
..+|++|.++|. .+ .++.+++.+++ +|+++.+++..
T Consensus 235 ~g~D~vid~~g~----------~~---------------~~~~~~~~l~~--~G~iv~~g~~~ 270 (348)
T 2d8a_A 235 NGVDVFLEFSGA----------PK---------------ALEQGLQAVTP--AGRVSLLGLYP 270 (348)
T ss_dssp SCEEEEEECSCC----------HH---------------HHHHHHHHEEE--EEEEEECCCCS
T ss_pred CCCCEEEECCCC----------HH---------------HHHHHHHHHhc--CCEEEEEccCC
Confidence 369999999984 11 23444555544 68999998754
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=97.85 E-value=5.9e-05 Score=64.92 Aligned_cols=79 Identities=19% Similarity=0.153 Sum_probs=57.6
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
.+++++|+|+|+ |++|+++++.+...|++|++++|++++++.+.+.... .+. ++..+.+++.+.+
T Consensus 164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~---~~~---~~~~~~~~~~~~~-------- 228 (361)
T 1pjc_A 164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS---RVE---LLYSNSAEIETAV-------- 228 (361)
T ss_dssp TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---GSE---EEECCHHHHHHHH--------
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc---eeE---eeeCCHHHHHHHH--------
Confidence 477899999999 9999999999999999999999999887766543321 121 1223344443322
Q ss_pred CCccEEEeCCCCCC
Q 024752 90 GKLNILINNAGTFI 103 (263)
Q Consensus 90 ~~id~li~~ag~~~ 103 (263)
...|++|++++...
T Consensus 229 ~~~DvVI~~~~~~~ 242 (361)
T 1pjc_A 229 AEADLLIGAVLVPG 242 (361)
T ss_dssp HTCSEEEECCCCTT
T ss_pred cCCCEEEECCCcCC
Confidence 25799999998643
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=97.82 E-value=4.7e-05 Score=58.83 Aligned_cols=79 Identities=20% Similarity=0.171 Sum_probs=58.8
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHC-CCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAF-GAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
.++.++.++|.| .|.+|..+++.|.+. |++|++++++++..+... ..+ +..+..|.++++.+.++ ..
T Consensus 35 ~~~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~----~~g--~~~~~gd~~~~~~l~~~-----~~ 102 (183)
T 3c85_A 35 INPGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHR----SEG--RNVISGDATDPDFWERI-----LD 102 (183)
T ss_dssp BCCTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH----HTT--CCEEECCTTCHHHHHTB-----CS
T ss_pred cCCCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH----HCC--CCEEEcCCCCHHHHHhc-----cC
Confidence 356677889998 599999999999999 999999999987765543 223 34566899887654432 01
Q ss_pred cCCCccEEEeCCC
Q 024752 88 FDGKLNILINNAG 100 (263)
Q Consensus 88 ~~~~id~li~~ag 100 (263)
. .+.|++|.+.+
T Consensus 103 ~-~~ad~vi~~~~ 114 (183)
T 3c85_A 103 T-GHVKLVLLAMP 114 (183)
T ss_dssp C-CCCCEEEECCS
T ss_pred C-CCCCEEEEeCC
Confidence 1 46899998876
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=97.80 E-value=8.4e-05 Score=63.45 Aligned_cols=78 Identities=18% Similarity=0.207 Sum_probs=55.5
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
+|++|+|+||+|++|..+++.+...|++|+++++++++.+.+. ++ +.... .|..+ +.. +++.+..++.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~~v---i~~~~--~~~---~~~~~~~~~g 217 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTK-KM---GADIV---LNHKE--SLL---NQFKTQGIEL 217 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHH-HH---TCSEE---ECTTS--CHH---HHHHHHTCCC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc---CCcEE---EECCc--cHH---HHHHHhCCCC
Confidence 5899999999999999999999999999999999887765443 23 33222 23332 222 2333333357
Q ss_pred ccEEEeCCCC
Q 024752 92 LNILINNAGT 101 (263)
Q Consensus 92 id~li~~ag~ 101 (263)
+|++++++|.
T Consensus 218 ~Dvv~d~~g~ 227 (346)
T 3fbg_A 218 VDYVFCTFNT 227 (346)
T ss_dssp EEEEEESSCH
T ss_pred ccEEEECCCc
Confidence 9999999983
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=97.73 E-value=0.0001 Score=62.84 Aligned_cols=76 Identities=22% Similarity=0.380 Sum_probs=52.6
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
.|++|||+||+|++|..+++.+...|++|+++ +++++++.. +++ +... .| .++ +..+.+.+... +..
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~l---Ga~~----i~-~~~-~~~~~~~~~~~--~~g 216 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RDL---GATP----ID-ASR-EPEDYAAEHTA--GQG 216 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HHH---TSEE----EE-TTS-CHHHHHHHHHT--TSC
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HHc---CCCE----ec-cCC-CHHHHHHHHhc--CCC
Confidence 48999999999999999999999999999998 776665433 333 3332 34 322 22333322221 246
Q ss_pred ccEEEeCCC
Q 024752 92 LNILINNAG 100 (263)
Q Consensus 92 id~li~~ag 100 (263)
+|++|.++|
T Consensus 217 ~D~vid~~g 225 (343)
T 3gaz_A 217 FDLVYDTLG 225 (343)
T ss_dssp EEEEEESSC
T ss_pred ceEEEECCC
Confidence 999999998
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00012 Score=62.98 Aligned_cols=78 Identities=19% Similarity=0.262 Sum_probs=54.6
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
.|++|+|+| +|++|...++.+...|++|+++++++++++.. +++ +.... .| .+.+++.+.+.++.. +..
T Consensus 189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l---Ga~~v---i~-~~~~~~~~~v~~~~~--g~g 257 (363)
T 3uog_A 189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FAL---GADHG---IN-RLEEDWVERVYALTG--DRG 257 (363)
T ss_dssp TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH---TCSEE---EE-TTTSCHHHHHHHHHT--TCC
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HHc---CCCEE---Ec-CCcccHHHHHHHHhC--CCC
Confidence 489999999 89999999999999999999999998876653 333 33322 24 332333333333322 236
Q ss_pred ccEEEeCCC
Q 024752 92 LNILINNAG 100 (263)
Q Consensus 92 id~li~~ag 100 (263)
+|+++.++|
T Consensus 258 ~D~vid~~g 266 (363)
T 3uog_A 258 ADHILEIAG 266 (363)
T ss_dssp EEEEEEETT
T ss_pred ceEEEECCC
Confidence 999999998
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=4.6e-05 Score=57.28 Aligned_cols=78 Identities=13% Similarity=0.071 Sum_probs=56.7
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
+..++.++|.|+ |.+|+.+++.|.+.|++|++++|+++..+.+.. .. ....+..|.++++.+.++ ..
T Consensus 16 ~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~~--g~~~~~~d~~~~~~l~~~------~~- 82 (155)
T 2g1u_A 16 KQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---EF--SGFTVVGDAAEFETLKEC------GM- 82 (155)
T ss_dssp -CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---TC--CSEEEESCTTSHHHHHTT------TG-
T ss_pred ccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---cC--CCcEEEecCCCHHHHHHc------Cc-
Confidence 456789999996 999999999999999999999999877543321 11 234566788876543321 11
Q ss_pred CCccEEEeCCC
Q 024752 90 GKLNILINNAG 100 (263)
Q Consensus 90 ~~id~li~~ag 100 (263)
...|++|.+.+
T Consensus 83 ~~ad~Vi~~~~ 93 (155)
T 2g1u_A 83 EKADMVFAFTN 93 (155)
T ss_dssp GGCSEEEECSS
T ss_pred ccCCEEEEEeC
Confidence 46899999987
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.69 E-value=9.4e-05 Score=61.02 Aligned_cols=78 Identities=14% Similarity=0.116 Sum_probs=59.4
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
..+++++|+++|+|+ ||+|++++..|++.|+ +|.+++|+.++.+++++++.. ..+..... .+ +.
T Consensus 114 ~~~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~--~~~~~~~~--~~---l~------- 178 (272)
T 3pwz_A 114 LGEPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH--SRLRISRY--EA---LE------- 178 (272)
T ss_dssp SCCCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC--TTEEEECS--GG---GT-------
T ss_pred cCCCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc--CCeeEeeH--HH---hc-------
Confidence 456789999999998 6999999999999996 899999999999988887643 23333322 11 10
Q ss_pred hhcCCCccEEEeCCCCC
Q 024752 86 SQFDGKLNILINNAGTF 102 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~ 102 (263)
. ...|+|||+....
T Consensus 179 ~---~~~DivInaTp~g 192 (272)
T 3pwz_A 179 G---QSFDIVVNATSAS 192 (272)
T ss_dssp T---CCCSEEEECSSGG
T ss_pred c---cCCCEEEECCCCC
Confidence 0 3579999997654
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00057 Score=58.37 Aligned_cols=82 Identities=26% Similarity=0.366 Sum_probs=53.3
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCC-HHHHHHHHHHHHhhcCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKI-RAQREKLMETVSSQFDG 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 90 (263)
.|++|+|+|+ |++|...++.+...|++|+++++++++.+... +.+.... .|.++ .+..+++.+......+.
T Consensus 168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~~---~~~~~~~~~~~~i~~~~~~~~g~ 239 (352)
T 1e3j_A 168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK----NCGADVT---LVVDPAKEEESSIIERIRSAIGD 239 (352)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----HTTCSEE---EECCTTTSCHHHHHHHHHHHSSS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH----HhCCCEE---EcCcccccHHHHHHHHhccccCC
Confidence 5899999997 89999999988889999999999987765442 2344322 23332 22222222211100124
Q ss_pred CccEEEeCCCC
Q 024752 91 KLNILINNAGT 101 (263)
Q Consensus 91 ~id~li~~ag~ 101 (263)
.+|++|+++|.
T Consensus 240 g~D~vid~~g~ 250 (352)
T 1e3j_A 240 LPNVTIDCSGN 250 (352)
T ss_dssp CCSEEEECSCC
T ss_pred CCCEEEECCCC
Confidence 69999999983
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00022 Score=52.57 Aligned_cols=77 Identities=14% Similarity=0.063 Sum_probs=58.3
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
-+++ +.++|.|+ |.+|+.+++.|.+.|++|++++++++..+...+ . .+..+..|.++++.+.++- .
T Consensus 4 ~~~~-~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~--g~~~i~gd~~~~~~l~~a~------i 69 (140)
T 3fwz_A 4 VDIC-NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----R--GVRAVLGNAANEEIMQLAH------L 69 (140)
T ss_dssp CCCC-SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T--TCEEEESCTTSHHHHHHTT------G
T ss_pred ccCC-CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----c--CCCEEECCCCCHHHHHhcC------c
Confidence 3455 45677776 889999999999999999999999987765542 2 3456789999988765531 1
Q ss_pred CCCccEEEeCCC
Q 024752 89 DGKLNILINNAG 100 (263)
Q Consensus 89 ~~~id~li~~ag 100 (263)
.+.|.+|.+.+
T Consensus 70 -~~ad~vi~~~~ 80 (140)
T 3fwz_A 70 -ECAKWLILTIP 80 (140)
T ss_dssp -GGCSEEEECCS
T ss_pred -ccCCEEEEECC
Confidence 46799988876
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.64 E-value=0.00052 Score=59.32 Aligned_cols=79 Identities=18% Similarity=0.273 Sum_probs=54.7
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCC-CeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCC--CHHHHHHHHHHHHhhc
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLK--IRAQREKLMETVSSQF 88 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~~~~~~~~~~~~~ 88 (263)
.|++|||+| +|++|...++.+...| ++|+++++++++.+.+. + .+.... .|.. +.+++.+ ++.+..
T Consensus 195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~---lGa~~v---i~~~~~~~~~~~~---~v~~~~ 263 (380)
T 1vj0_A 195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-E---IGADLT---LNRRETSVEERRK---AIMDIT 263 (380)
T ss_dssp BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-H---TTCSEE---EETTTSCHHHHHH---HHHHHT
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-H---cCCcEE---EeccccCcchHHH---HHHHHh
Confidence 489999999 8999999999988999 59999999987765443 2 343322 2332 2334333 333333
Q ss_pred CC-CccEEEeCCCC
Q 024752 89 DG-KLNILINNAGT 101 (263)
Q Consensus 89 ~~-~id~li~~ag~ 101 (263)
++ .+|++|.++|.
T Consensus 264 ~g~g~Dvvid~~g~ 277 (380)
T 1vj0_A 264 HGRGADFILEATGD 277 (380)
T ss_dssp TTSCEEEEEECSSC
T ss_pred CCCCCcEEEECCCC
Confidence 23 69999999984
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00022 Score=58.03 Aligned_cols=80 Identities=16% Similarity=0.223 Sum_probs=60.4
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCc-------------------hhHHHHHHHHHhc--CCceEEEe
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNE-------------------TELNQRIQEWKSK--GLQVSGSV 68 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~-------------------~~~~~~~~~~~~~--~~~~~~~~ 68 (263)
+++++|+|.|+ ||+|..+++.|+..|. ++.+++++. .+.+..++.+.+. ..++..+.
T Consensus 29 l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~ 107 (249)
T 1jw9_B 29 LKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN 107 (249)
T ss_dssp HHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEe
Confidence 67899999996 7999999999999998 899999998 7777777777664 33455555
Q ss_pred ccCCCHHHHHHHHHHHHhhcCCCccEEEeCCC
Q 024752 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAG 100 (263)
Q Consensus 69 ~D~~~~~~~~~~~~~~~~~~~~~id~li~~ag 100 (263)
.++++ +.+.+++ ...|+||.+..
T Consensus 108 ~~~~~-~~~~~~~--------~~~DvVi~~~d 130 (249)
T 1jw9_B 108 ALLDD-AELAALI--------AEHDLVLDCTD 130 (249)
T ss_dssp SCCCH-HHHHHHH--------HTSSEEEECCS
T ss_pred ccCCH-hHHHHHH--------hCCCEEEEeCC
Confidence 56653 3333333 35799998875
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00036 Score=59.42 Aligned_cols=120 Identities=17% Similarity=0.158 Sum_probs=73.8
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
+++++|.|+|++|.+|..++..++..|. .|+++|+++++++....++...... ..++.-..+..+.+
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~----~~~i~~t~d~~~al------- 74 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFE----GLNLTFTSDIKEAL------- 74 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCT----TCCCEEESCHHHHH-------
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCC----CCceEEcCCHHHHh-------
Confidence 3467899999999999999999999984 7999999998887766666542110 01111111122222
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-CCce-EEEEcccc
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-GNGN-IIFISSVA 152 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~-iv~vsS~~ 152 (263)
..-|++|.+||.... + .++-.+.+..|+--...+.+.+ .+. ..+. ++++|-..
T Consensus 75 -~dADvVvitaG~p~k-p-----G~~R~dLl~~N~~I~~~i~~~i----~~~~p~a~~vlvvsNPv 129 (343)
T 3fi9_A 75 -TDAKYIVSSGGAPRK-E-----GMTREDLLKGNAEIAAQLGKDI----KSYCPDCKHVIIIFNPA 129 (343)
T ss_dssp -TTEEEEEECCC-------------CHHHHHHHHHHHHHHHHHHH----HHHCTTCCEEEECSSSH
T ss_pred -CCCCEEEEccCCCCC-C-----CCCHHHHHHHHHHHHHHHHHHH----HHhccCcEEEEEecCch
Confidence 467999999996421 1 2234456777775555555544 443 3464 67776544
|
| >1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1 | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00011 Score=61.53 Aligned_cols=38 Identities=32% Similarity=0.307 Sum_probs=33.1
Q ss_pred CCCCCE-EEEecCCC-----------------c-hHHHHHHHHHHCCCeEEEeeCCc
Q 024752 10 SLKGMT-ALVTGGTK-----------------G-IGYAVVEELAAFGAIVHTCSRNE 47 (263)
Q Consensus 10 ~~~~k~-vlVtGas~-----------------g-iG~~~a~~l~~~g~~V~~~~r~~ 47 (263)
+++||+ ||||+|.. | .|.++|+.|+++|+.|+++.+..
T Consensus 33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR 89 (313)
T ss_dssp HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence 478888 99998875 5 99999999999999999998853
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00021 Score=59.67 Aligned_cols=74 Identities=18% Similarity=0.251 Sum_probs=53.2
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
.|++++|+|++|++|..+++.+...|++|+++++++++.+... + .+.... .|..+.++ +.+++ +.
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~---~ga~~~---~~~~~~~~---~~~~~-----~~ 189 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-A---LGAEEA---ATYAEVPE---RAKAW-----GG 189 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-H---TTCSEE---EEGGGHHH---HHHHT-----TS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-h---cCCCEE---EECCcchh---HHHHh-----cC
Confidence 5899999999999999999999999999999999988766542 2 233221 34443122 22222 46
Q ss_pred ccEEEeCCCC
Q 024752 92 LNILINNAGT 101 (263)
Q Consensus 92 id~li~~ag~ 101 (263)
+|++|+ +|.
T Consensus 190 ~d~vid-~g~ 198 (302)
T 1iz0_A 190 LDLVLE-VRG 198 (302)
T ss_dssp EEEEEE-CSC
T ss_pred ceEEEE-CCH
Confidence 999999 884
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00028 Score=56.06 Aligned_cols=73 Identities=8% Similarity=0.037 Sum_probs=58.0
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCccE
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNI 94 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 94 (263)
+++|.|+ |.+|+++++.|.+.|++|++++++++..++..+. . .+.++..|.++++.+.++- -.+.|+
T Consensus 2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~---~--~~~~i~gd~~~~~~l~~a~-------i~~ad~ 68 (218)
T 3l4b_C 2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK---L--KATIIHGDGSHKEILRDAE-------VSKNDV 68 (218)
T ss_dssp CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH---S--SSEEEESCTTSHHHHHHHT-------CCTTCE
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH---c--CCeEEEcCCCCHHHHHhcC-------cccCCE
Confidence 5889996 8999999999999999999999999887665433 1 3567889999987766541 146899
Q ss_pred EEeCCC
Q 024752 95 LINNAG 100 (263)
Q Consensus 95 li~~ag 100 (263)
+|.+.+
T Consensus 69 vi~~~~ 74 (218)
T 3l4b_C 69 VVILTP 74 (218)
T ss_dssp EEECCS
T ss_pred EEEecC
Confidence 988766
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.56 E-value=3.9e-05 Score=56.91 Aligned_cols=71 Identities=11% Similarity=0.131 Sum_probs=53.3
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
+++++|.|+ |++|+.+++.|.+.|++|.+++|++++.+++.+++. . ... +..+ +.+++ ...
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~---~--~~~--~~~~---~~~~~--------~~~ 81 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE---Y--EYV--LIND---IDSLI--------KNN 81 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT---C--EEE--ECSC---HHHHH--------HTC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC---C--ceE--eecC---HHHHh--------cCC
Confidence 899999996 999999999999999999999999998887766652 1 111 2222 22222 257
Q ss_pred cEEEeCCCCC
Q 024752 93 NILINNAGTF 102 (263)
Q Consensus 93 d~li~~ag~~ 102 (263)
|++|++.+..
T Consensus 82 Divi~at~~~ 91 (144)
T 3oj0_A 82 DVIITATSSK 91 (144)
T ss_dssp SEEEECSCCS
T ss_pred CEEEEeCCCC
Confidence 9999998754
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=97.55 E-value=0.0002 Score=61.02 Aligned_cols=100 Identities=17% Similarity=0.206 Sum_probs=66.6
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
.|++|+|+|+ |++|..+++.+...|+ +|+++++++++.+... ++ .. . ..|..++ ++.+.+.++. +.
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~l----a~-~--v~~~~~~-~~~~~~~~~~---~~ 230 (343)
T 2dq4_A 164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFAR-PY----AD-R--LVNPLEE-DLLEVVRRVT---GS 230 (343)
T ss_dssp TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGT-TT----CS-E--EECTTTS-CHHHHHHHHH---SS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh----HH-h--ccCcCcc-CHHHHHHHhc---CC
Confidence 7899999999 9999999999989999 8999999987654332 21 11 1 1344432 2333333332 25
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccc
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSV 151 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~ 151 (263)
.+|++|.++|. . ..++..++.+++ +|+++.++..
T Consensus 231 g~D~vid~~g~----------~---------------~~~~~~~~~l~~--~G~iv~~g~~ 264 (343)
T 2dq4_A 231 GVEVLLEFSGN----------E---------------AAIHQGLMALIP--GGEARILGIP 264 (343)
T ss_dssp CEEEEEECSCC----------H---------------HHHHHHHHHEEE--EEEEEECCCC
T ss_pred CCCEEEECCCC----------H---------------HHHHHHHHHHhc--CCEEEEEecC
Confidence 79999999984 1 123444455544 6899998764
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00043 Score=59.39 Aligned_cols=86 Identities=15% Similarity=0.134 Sum_probs=53.1
Q ss_pred CC-CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCH--HHHHHHHHHHHhhc
Q 024752 12 KG-MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR--AQREKLMETVSSQF 88 (263)
Q Consensus 12 ~~-k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~ 88 (263)
.| ++|+|+|++|++|...++.+...|++|+.++++.++.++..+.+.+.|....+ |..+. +++.+.+.++....
T Consensus 166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi---~~~~~~~~~~~~~i~~~t~~~ 242 (364)
T 1gu7_A 166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVI---TEDQNNSREFGPTIKEWIKQS 242 (364)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEE---EHHHHHCGGGHHHHHHHHHHH
T ss_pred CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEE---ecCccchHHHHHHHHHHhhcc
Confidence 47 99999999999999999988889999999988776532222223333443222 21110 12222222221001
Q ss_pred CCCccEEEeCCC
Q 024752 89 DGKLNILINNAG 100 (263)
Q Consensus 89 ~~~id~li~~ag 100 (263)
++.+|++|.++|
T Consensus 243 ~~g~Dvvid~~G 254 (364)
T 1gu7_A 243 GGEAKLALNCVG 254 (364)
T ss_dssp TCCEEEEEESSC
T ss_pred CCCceEEEECCC
Confidence 257999999998
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* | Back alignment and structure |
|---|
Probab=97.47 E-value=0.0013 Score=56.60 Aligned_cols=79 Identities=19% Similarity=0.252 Sum_probs=53.7
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCC-HHHHHHHHHHHHhhcC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKI-RAQREKLMETVSSQFD 89 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 89 (263)
.|++|||+|+ |++|...++.+...|+ +|+++++++++.+... ++ +.... .|.++ .+++.+.+. +..+
T Consensus 190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~l---Ga~~v---i~~~~~~~~~~~~v~---~~~~ 258 (373)
T 2fzw_A 190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EF---GATEC---INPQDFSKPIQEVLI---EMTD 258 (373)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HH---TCSEE---ECGGGCSSCHHHHHH---HHTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc---CCceE---eccccccccHHHHHH---HHhC
Confidence 4899999996 9999999998888999 8999999988876543 33 33222 23332 122333333 3222
Q ss_pred CCccEEEeCCCC
Q 024752 90 GKLNILINNAGT 101 (263)
Q Consensus 90 ~~id~li~~ag~ 101 (263)
+.+|++|.++|.
T Consensus 259 ~g~D~vid~~g~ 270 (373)
T 2fzw_A 259 GGVDYSFECIGN 270 (373)
T ss_dssp SCBSEEEECSCC
T ss_pred CCCCEEEECCCc
Confidence 479999999984
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.46 E-value=0.0012 Score=56.79 Aligned_cols=79 Identities=16% Similarity=0.209 Sum_probs=54.1
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCC-HHHHHHHHHHHHhhcC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKI-RAQREKLMETVSSQFD 89 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 89 (263)
.|++|+|+|+ |++|...++.+...|+ +|+++++++++.+... + .+.... .|.++ .+++.+.+.++. +
T Consensus 192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~---lGa~~v---i~~~~~~~~~~~~~~~~~---~ 260 (374)
T 1cdo_A 192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-V---FGATDF---VNPNDHSEPISQVLSKMT---N 260 (374)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-H---TTCCEE---ECGGGCSSCHHHHHHHHH---T
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-H---hCCceE---EeccccchhHHHHHHHHh---C
Confidence 4899999995 9999999999889999 8999999988876543 2 333222 23332 122333333322 2
Q ss_pred CCccEEEeCCCC
Q 024752 90 GKLNILINNAGT 101 (263)
Q Consensus 90 ~~id~li~~ag~ 101 (263)
+.+|++|.++|.
T Consensus 261 ~g~D~vid~~g~ 272 (374)
T 1cdo_A 261 GGVDFSLECVGN 272 (374)
T ss_dssp SCBSEEEECSCC
T ss_pred CCCCEEEECCCC
Confidence 479999999984
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00066 Score=57.76 Aligned_cols=101 Identities=23% Similarity=0.296 Sum_probs=66.5
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHC--CCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAF--GAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
.|++|+|+|+ |++|...++.+... |++|+++++++++.+... ++ +.... .|..+. ...++++.+ +
T Consensus 170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~~v---i~~~~~---~~~~~~~~~--g 236 (344)
T 2h6e_A 170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-EL---GADYV---SEMKDA---ESLINKLTD--G 236 (344)
T ss_dssp SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HH---TCSEE---ECHHHH---HHHHHHHHT--T
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-Hh---CCCEE---eccccc---hHHHHHhhc--C
Confidence 7899999999 89999999988888 999999999988765443 33 33211 132220 122333332 2
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccc
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVA 152 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~ 152 (263)
..+|++|.++|. .+ .++..++.+++ +|+++.++...
T Consensus 237 ~g~D~vid~~g~----------~~---------------~~~~~~~~l~~--~G~iv~~g~~~ 272 (344)
T 2h6e_A 237 LGASIAIDLVGT----------EE---------------TTYNLGKLLAQ--EGAIILVGMEG 272 (344)
T ss_dssp CCEEEEEESSCC----------HH---------------HHHHHHHHEEE--EEEEEECCCCS
T ss_pred CCccEEEECCCC----------hH---------------HHHHHHHHhhc--CCEEEEeCCCC
Confidence 379999999984 11 22344444444 68999987643
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A | Back alignment and structure |
|---|
Probab=97.42 E-value=0.0023 Score=54.66 Aligned_cols=79 Identities=24% Similarity=0.284 Sum_probs=53.5
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCC--CHHHHHHHHHHHHhhc
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLK--IRAQREKLMETVSSQF 88 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~~~~~~~~~~~~~ 88 (263)
.|++|+|+|+ |++|...++.+...|+ +|+++++++++.+... + .+.... .|.. +.++. .+++.+..
T Consensus 171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~---lGa~~v---i~~~~~~~~~~---~~~i~~~~ 239 (356)
T 1pl8_A 171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-E---IGADLV---LQISKESPQEI---ARKVEGQL 239 (356)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-H---TTCSEE---EECSSCCHHHH---HHHHHHHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-H---hCCCEE---EcCcccccchH---HHHHHHHh
Confidence 4899999996 8999999998888999 8999999887665432 2 343322 2433 22332 23333322
Q ss_pred CCCccEEEeCCCC
Q 024752 89 DGKLNILINNAGT 101 (263)
Q Consensus 89 ~~~id~li~~ag~ 101 (263)
++.+|++|.++|.
T Consensus 240 ~~g~D~vid~~g~ 252 (356)
T 1pl8_A 240 GCKPEVTIECTGA 252 (356)
T ss_dssp TSCCSEEEECSCC
T ss_pred CCCCCEEEECCCC
Confidence 2469999999983
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=97.42 E-value=0.0016 Score=54.81 Aligned_cols=116 Identities=16% Similarity=0.116 Sum_probs=72.2
Q ss_pred EEEEecCCCchHHHHHHHHHHCC--CeEEEeeCCchhHHHHHHHHHhcCCc--eEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 15 TALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETELNQRIQEWKSKGLQ--VSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
+|.|+||+|.+|..++..|++.| ..|.++++++ .+....++...... +.... ..++.++++ .
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~----~t~d~~~a~--------~ 67 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYL----GPEQLPDCL--------K 67 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEE----SGGGHHHHH--------T
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEec----CCCCHHHHh--------C
Confidence 68999999999999999999988 6899999987 33444444432111 11110 012233333 4
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccc
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAG 153 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 153 (263)
..|++|+.+|...... .+.. +.+..|+-....+.+.+.++ ...+.+|++|-...
T Consensus 68 ~aDvVvi~ag~~~~~g---~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~viv~sNPv~ 121 (314)
T 1mld_A 68 GCDVVVIPAGVPRKPG---MTRD---DLFNTNATIVATLTAACAQH---CPDAMICIISNPVN 121 (314)
T ss_dssp TCSEEEECCSCCCCTT---CCGG---GGHHHHHHHHHHHHHHHHHH---CTTSEEEECSSCHH
T ss_pred CCCEEEECCCcCCCCC---CcHH---HHHHHHHHHHHHHHHHHHhh---CCCeEEEEECCCcc
Confidence 6799999999753221 1222 24666766665565555333 34678888876554
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* | Back alignment and structure |
|---|
Probab=97.41 E-value=0.0006 Score=58.74 Aligned_cols=103 Identities=23% Similarity=0.350 Sum_probs=67.8
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh---h
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS---Q 87 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~---~ 87 (263)
.|++|+|+|+ |++|...++.+...|+ +|+++++++++.+ .++++ |.... .|.++.+ +.+.+.+ .
T Consensus 182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~-~a~~l---Ga~~v---i~~~~~~----~~~~i~~~~~~ 249 (370)
T 4ej6_A 182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRR-LAEEV---GATAT---VDPSAGD----VVEAIAGPVGL 249 (370)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHH-HHHHH---TCSEE---ECTTSSC----HHHHHHSTTSS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HHHHc---CCCEE---ECCCCcC----HHHHHHhhhhc
Confidence 4899999998 8999999999889999 8999999887765 33333 33222 2444332 2233333 3
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccc
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAG 153 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 153 (263)
.++.+|++|.++|.. + .++.+++.++. +|+++.++....
T Consensus 250 ~~gg~Dvvid~~G~~----------~---------------~~~~~~~~l~~--~G~vv~~G~~~~ 288 (370)
T 4ej6_A 250 VPGGVDVVIECAGVA----------E---------------TVKQSTRLAKA--GGTVVILGVLPQ 288 (370)
T ss_dssp STTCEEEEEECSCCH----------H---------------HHHHHHHHEEE--EEEEEECSCCCT
T ss_pred cCCCCCEEEECCCCH----------H---------------HHHHHHHHhcc--CCEEEEEeccCC
Confidence 335799999999841 1 23344444444 689999876443
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00079 Score=58.01 Aligned_cols=76 Identities=20% Similarity=0.344 Sum_probs=52.3
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
+|++|+|+||+|++|..+++.+...|++|+++++ +++.+. ++ +.+.... .|.++++- .+++.+. +.
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~-~~---~lGa~~v---~~~~~~~~----~~~~~~~--~g 248 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASEL-VR---KLGADDV---IDYKSGSV----EEQLKSL--KP 248 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHH-HH---HTTCSEE---EETTSSCH----HHHHHTS--CC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHH-HH---HcCCCEE---EECCchHH----HHHHhhc--CC
Confidence 5899999999999999999999999999999884 454433 23 3344322 24443322 2233332 47
Q ss_pred ccEEEeCCCC
Q 024752 92 LNILINNAGT 101 (263)
Q Consensus 92 id~li~~ag~ 101 (263)
+|++|.++|.
T Consensus 249 ~D~vid~~g~ 258 (375)
T 2vn8_A 249 FDFILDNVGG 258 (375)
T ss_dssp BSEEEESSCT
T ss_pred CCEEEECCCC
Confidence 9999999994
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* | Back alignment and structure |
|---|
Probab=97.40 E-value=0.0019 Score=55.55 Aligned_cols=79 Identities=16% Similarity=0.189 Sum_probs=53.6
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCC-HHHHHHHHHHHHhhcC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKI-RAQREKLMETVSSQFD 89 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 89 (263)
.|++|+|+|+ |++|...++.+...|+ +|+++++++++.+... + .+.... .|.++ .+++.+.+.++ .+
T Consensus 195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~---lGa~~v---i~~~~~~~~~~~~v~~~---~~ 263 (376)
T 1e3i_A 195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-A---LGATDC---LNPRELDKPVQDVITEL---TA 263 (376)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-H---TTCSEE---ECGGGCSSCHHHHHHHH---HT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-H---hCCcEE---EccccccchHHHHHHHH---hC
Confidence 4899999996 9999999998888999 8999999988776442 3 333322 23332 11233333222 22
Q ss_pred CCccEEEeCCCC
Q 024752 90 GKLNILINNAGT 101 (263)
Q Consensus 90 ~~id~li~~ag~ 101 (263)
+.+|++|.++|.
T Consensus 264 ~g~Dvvid~~G~ 275 (376)
T 1e3i_A 264 GGVDYSLDCAGT 275 (376)
T ss_dssp SCBSEEEESSCC
T ss_pred CCccEEEECCCC
Confidence 479999999984
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00027 Score=59.96 Aligned_cols=119 Identities=13% Similarity=0.134 Sum_probs=73.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--e-----EEEeeCCc--hhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHH
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGA--I-----VHTCSRNE--TELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~--~-----V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 84 (263)
++|+||||+|.||.+++..|+..|. . ++++++++ +.++-...++......... ....+ .+..+.
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~-~~~~~--~~~~~~---- 76 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLK-DVIAT--DKEEIA---- 76 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEE-EEEEE--SCHHHH----
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccC-CEEEc--CCcHHH----
Confidence 5799999999999999999998875 4 99999975 3556666666553211111 11111 111111
Q ss_pred HhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-Cc-eEEEEccccc
Q 024752 85 SSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NG-NIIFISSVAG 153 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~-~iv~vsS~~~ 153 (263)
+ ...|++|+.||.... + .. +-.+.++.|+.....+...+ .+.. ++ +++++|-...
T Consensus 77 ---~-~daDvVvitAg~prk-p--G~---tR~dll~~N~~i~~~i~~~i----~~~~~~~~~vivvsNPvd 133 (333)
T 5mdh_A 77 ---F-KDLDVAILVGSMPRR-D--GM---ERKDLLKANVKIFKCQGAAL----DKYAKKSVKVIVVGNPAN 133 (333)
T ss_dssp ---T-TTCSEEEECCSCCCC-T--TC---CTTTTHHHHHHHHHHHHHHH----HHHSCTTCEEEECSSSHH
T ss_pred ---h-CCCCEEEEeCCCCCC-C--CC---CHHHHHHHHHHHHHHHHHHH----HHhCCCCeEEEEcCCchH
Confidence 1 467999999986422 1 11 23445777776665555555 4443 35 5887776543
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=97.38 E-value=4.4e-05 Score=63.11 Aligned_cols=47 Identities=15% Similarity=0.188 Sum_probs=40.9
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHH
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRI 54 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~ 54 (263)
...++++|+++|+|+ ||+|++++..|++.|+ +|.+++|+.++.+++.
T Consensus 111 ~~~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la 158 (277)
T 3don_A 111 IYEGIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWS 158 (277)
T ss_dssp HSTTGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCC
T ss_pred hCCCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH
Confidence 346789999999997 7999999999999999 8999999998765543
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=97.38 E-value=0.002 Score=52.86 Aligned_cols=67 Identities=19% Similarity=0.145 Sum_probs=52.2
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
+|+++|.|+ ||.|++++..|++.|.+|.++.|+.++.+++. ++. +... +..+ . ...
T Consensus 118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~-----~~~~--~~~~--------------l-~~~ 173 (269)
T 3phh_A 118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLG-----CDCF--MEPP--------------K-SAF 173 (269)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHT-----CEEE--SSCC--------------S-SCC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCC-----CeEe--cHHH--------------h-ccC
Confidence 899999997 89999999999999999999999999988887 542 2222 2211 1 157
Q ss_pred cEEEeCCCCCC
Q 024752 93 NILINNAGTFI 103 (263)
Q Consensus 93 d~li~~ag~~~ 103 (263)
|++||+....-
T Consensus 174 DiVInaTp~Gm 184 (269)
T 3phh_A 174 DLIINATSASL 184 (269)
T ss_dssp SEEEECCTTCC
T ss_pred CEEEEcccCCC
Confidence 99999977653
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=97.37 E-value=0.0005 Score=59.98 Aligned_cols=73 Identities=16% Similarity=0.252 Sum_probs=54.8
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
+++|++++|.|+ |++|+.+++.|...|+ +|++++|+.++.+++.+++. .. . .+. +++.+.+
T Consensus 164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g---~~--~--~~~---~~l~~~l------- 225 (404)
T 1gpj_A 164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG---GE--A--VRF---DELVDHL------- 225 (404)
T ss_dssp CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT---CE--E--CCG---GGHHHHH-------
T ss_pred cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC---Cc--e--ecH---HhHHHHh-------
Confidence 578999999998 9999999999999999 89999999988766666542 21 1 122 2233322
Q ss_pred CCCccEEEeCCCC
Q 024752 89 DGKLNILINNAGT 101 (263)
Q Consensus 89 ~~~id~li~~ag~ 101 (263)
...|++|++.+.
T Consensus 226 -~~aDvVi~at~~ 237 (404)
T 1gpj_A 226 -ARSDVVVSATAA 237 (404)
T ss_dssp -HTCSEEEECCSS
T ss_pred -cCCCEEEEccCC
Confidence 257999999874
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... | Back alignment and structure |
|---|
Probab=97.36 E-value=0.0022 Score=55.10 Aligned_cols=79 Identities=19% Similarity=0.281 Sum_probs=53.9
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCC-HHHHHHHHHHHHhhcC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKI-RAQREKLMETVSSQFD 89 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 89 (263)
.|++|+|+|+ |++|..+++.+...|+ +|+++++++++.+... + .+.... .|.++ .+++.+.+.++ .+
T Consensus 191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~---lGa~~v---i~~~~~~~~~~~~~~~~---~~ 259 (374)
T 2jhf_A 191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-E---VGATEC---VNPQDYKKPIQEVLTEM---SN 259 (374)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-H---TTCSEE---ECGGGCSSCHHHHHHHH---TT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-H---hCCceE---ecccccchhHHHHHHHH---hC
Confidence 4899999995 9999999999989999 8999999988776542 2 333222 23332 12233333332 22
Q ss_pred CCccEEEeCCCC
Q 024752 90 GKLNILINNAGT 101 (263)
Q Consensus 90 ~~id~li~~ag~ 101 (263)
+.+|++|.++|.
T Consensus 260 ~g~D~vid~~g~ 271 (374)
T 2jhf_A 260 GGVDFSFEVIGR 271 (374)
T ss_dssp SCBSEEEECSCC
T ss_pred CCCcEEEECCCC
Confidence 479999999984
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0012 Score=56.80 Aligned_cols=79 Identities=16% Similarity=0.225 Sum_probs=54.7
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
-.|++|+|.|++|++|...++.+...|++|+.+. ++++.+ .+++ .|.... .|..+++ +.+++++..++
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~-~~~~---lGa~~v---i~~~~~~----~~~~v~~~t~g 230 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD-LAKS---RGAEEV---FDYRAPN----LAQTIRTYTKN 230 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH-HHHH---TTCSEE---EETTSTT----HHHHHHHHTTT
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH-HHHH---cCCcEE---EECCCch----HHHHHHHHccC
Confidence 4689999999999999999999999999999886 555544 3333 343322 2444332 23333443345
Q ss_pred CccEEEeCCCC
Q 024752 91 KLNILINNAGT 101 (263)
Q Consensus 91 ~id~li~~ag~ 101 (263)
++|+++.++|.
T Consensus 231 ~~d~v~d~~g~ 241 (371)
T 3gqv_A 231 NLRYALDCITN 241 (371)
T ss_dssp CCCEEEESSCS
T ss_pred CccEEEECCCc
Confidence 69999999994
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=97.33 E-value=0.0067 Score=51.21 Aligned_cols=118 Identities=11% Similarity=0.015 Sum_probs=76.4
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchhHHHHHHHHHhc----CCceEEEeccCCCHHHHHHHHHHH
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSK----GLQVSGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~ 84 (263)
.+.+++.|+|+ |.+|.+++..|++.|. .|+++++++++++....++... +..+.....| .
T Consensus 3 ~~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~---------- 68 (326)
T 3pqe_A 3 KHVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---Y---------- 68 (326)
T ss_dssp CSCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---G----------
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---H----------
Confidence 34678999996 9999999999999987 8999999998888777666642 1122222112 1
Q ss_pred HhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccc
Q 024752 85 SSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAG 153 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 153 (263)
+.+ ..-|++|..+|.... + ..+. .+.++.|.--...+.+.+..+ ...+.++++|-...
T Consensus 69 -~a~-~~aDvVvi~ag~p~k-p--G~~R---~dL~~~N~~Iv~~i~~~I~~~---~p~a~vlvvtNPvd 126 (326)
T 3pqe_A 69 -EDC-KDADIVCICAGANQK-P--GETR---LELVEKNLKIFKGIVSEVMAS---GFDGIFLVATNPVD 126 (326)
T ss_dssp -GGG-TTCSEEEECCSCCCC-T--TCCH---HHHHHHHHHHHHHHHHHHHHT---TCCSEEEECSSSHH
T ss_pred -HHh-CCCCEEEEecccCCC-C--CccH---HHHHHHHHHHHHHHHHHHHHh---cCCeEEEEcCChHH
Confidence 112 467999999996422 1 1232 345677765554555554332 24577888876554
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=97.32 E-value=0.003 Score=53.31 Aligned_cols=119 Identities=8% Similarity=0.023 Sum_probs=69.8
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchhHHHHHHHHHhcC---CceEEEeccCCCHHHHHHHHHH
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKG---LQVSGSVCDLKIRAQREKLMET 83 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~ 83 (263)
++.+++++.|+|+ |.+|.+++..|+..|. .++++++++++++....++.... ..+... .| +.
T Consensus 5 ~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~-~~--~~--------- 71 (326)
T 3vku_A 5 TDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIY-SA--EY--------- 71 (326)
T ss_dssp --CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-EC--CG---------
T ss_pred ccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEE-EC--cH---------
Confidence 4567889999996 9999999999999987 89999999988887777776421 122221 11 11
Q ss_pred HHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-CCceEEEEccccc
Q 024752 84 VSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-GNGNIIFISSVAG 153 (263)
Q Consensus 84 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~ 153 (263)
+.+ ..-|++|..||.... + -++-.+.++.|.--...+.+.+ .+. +.+.++++|-...
T Consensus 72 --~a~-~~aDiVvi~ag~~~k-p-----G~tR~dL~~~N~~I~~~i~~~i----~~~~p~a~ilvvtNPvd 129 (326)
T 3vku_A 72 --SDA-KDADLVVITAGAPQK-P-----GETRLDLVNKNLKILKSIVDPI----VDSGFNGIFLVAANPVD 129 (326)
T ss_dssp --GGG-TTCSEEEECCCCC----------------------CHHHHHHHH----HTTTCCSEEEECSSSHH
T ss_pred --HHh-cCCCEEEECCCCCCC-C-----CchHHHHHHHHHHHHHHHHHHH----HhcCCceEEEEccCchH
Confidence 112 468999999996421 1 2233455677765544444444 443 4577777776543
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0023 Score=54.98 Aligned_cols=79 Identities=20% Similarity=0.287 Sum_probs=53.3
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCC-HHHHHHHHHHHHhhcC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKI-RAQREKLMETVSSQFD 89 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 89 (263)
.|++|+|+|+ |++|...++.+...|+ +|+++++++++.+... + .+.... .|..+ .+++.+ ++.+..+
T Consensus 191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~---lGa~~v---i~~~~~~~~~~~---~i~~~t~ 259 (373)
T 1p0f_A 191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-E---LGATEC---LNPKDYDKPIYE---VICEKTN 259 (373)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-H---TTCSEE---ECGGGCSSCHHH---HHHHHTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-H---cCCcEE---EecccccchHHH---HHHHHhC
Confidence 4899999995 9999999998888899 8999999988776442 3 343322 23221 112222 2333323
Q ss_pred CCccEEEeCCCC
Q 024752 90 GKLNILINNAGT 101 (263)
Q Consensus 90 ~~id~li~~ag~ 101 (263)
+.+|++|.++|.
T Consensus 260 gg~Dvvid~~g~ 271 (373)
T 1p0f_A 260 GGVDYAVECAGR 271 (373)
T ss_dssp SCBSEEEECSCC
T ss_pred CCCCEEEECCCC
Confidence 479999999984
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=97.31 E-value=0.003 Score=53.57 Aligned_cols=76 Identities=18% Similarity=0.256 Sum_probs=53.9
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
.|++|+|+|+ |++|...++.+...|++|+++++++++.+.. + +.+.... .|..+++..+. +.+.. +.
T Consensus 166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~---~lGa~~~---i~~~~~~~~~~----~~~~~-g~ 232 (340)
T 3s2e_A 166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLA-R---RLGAEVA---VNARDTDPAAW----LQKEI-GG 232 (340)
T ss_dssp TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHH-H---HTTCSEE---EETTTSCHHHH----HHHHH-SS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-H---HcCCCEE---EeCCCcCHHHH----HHHhC-CC
Confidence 5899999997 8999999999999999999999998876643 2 2344322 24443322222 22233 58
Q ss_pred ccEEEeCCC
Q 024752 92 LNILINNAG 100 (263)
Q Consensus 92 id~li~~ag 100 (263)
+|++|.++|
T Consensus 233 ~d~vid~~g 241 (340)
T 3s2e_A 233 AHGVLVTAV 241 (340)
T ss_dssp EEEEEESSC
T ss_pred CCEEEEeCC
Confidence 999999987
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00083 Score=57.68 Aligned_cols=78 Identities=18% Similarity=0.145 Sum_probs=54.1
Q ss_pred CCCEEEEecCCCchHHHHHHHHHH-CCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAA-FGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
+|++|+|+||+|++|...++.+.. .|++|+++++++++.+.+. +.|.... .|-++ + +.+++.+..++
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~----~lGad~v---i~~~~--~---~~~~v~~~~~~ 238 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK----SLGAHHV---IDHSK--P---LAAEVAALGLG 238 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH----HTTCSEE---ECTTS--C---HHHHHHTTCSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH----HcCCCEE---EeCCC--C---HHHHHHHhcCC
Confidence 588999999999999988877665 5899999999987765442 2344322 23332 2 23334443335
Q ss_pred CccEEEeCCCC
Q 024752 91 KLNILINNAGT 101 (263)
Q Consensus 91 ~id~li~~ag~ 101 (263)
.+|+++.++|.
T Consensus 239 g~Dvvid~~g~ 249 (363)
T 4dvj_A 239 APAFVFSTTHT 249 (363)
T ss_dssp CEEEEEECSCH
T ss_pred CceEEEECCCc
Confidence 79999999983
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00036 Score=58.98 Aligned_cols=75 Identities=20% Similarity=0.194 Sum_probs=50.3
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCccE
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNI 94 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 94 (263)
+|+|+|++|++|..+++.+...|++|+++++++++.+... + .+.... .|.++.+ .+.+.++ .++.+|+
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~---lGa~~~---i~~~~~~--~~~~~~~---~~~~~d~ 219 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-V---LGAKEV---LAREDVM--AERIRPL---DKQRWAA 219 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-H---TTCSEE---EECC-----------C---CSCCEEE
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-H---cCCcEE---EecCCcH--HHHHHHh---cCCcccE
Confidence 7999999999999999999999999999999987765542 2 343322 2444322 1222221 2246999
Q ss_pred EEeCCCC
Q 024752 95 LINNAGT 101 (263)
Q Consensus 95 li~~ag~ 101 (263)
+|.++|.
T Consensus 220 vid~~g~ 226 (328)
T 1xa0_A 220 AVDPVGG 226 (328)
T ss_dssp EEECSTT
T ss_pred EEECCcH
Confidence 9999984
|
| >3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0014 Score=55.94 Aligned_cols=78 Identities=19% Similarity=0.244 Sum_probs=52.7
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
.|++|+|+|+ |++|...++.+...|+ +|+++++++++++.. +++ +.... .|.++.+ +.+++.+..++
T Consensus 166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~l---Ga~~v---i~~~~~~----~~~~v~~~t~g 233 (352)
T 3fpc_A 166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIA-LEY---GATDI---INYKNGD----IVEQILKATDG 233 (352)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHH-HHH---TCCEE---ECGGGSC----HHHHHHHHTTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHh---CCceE---EcCCCcC----HHHHHHHHcCC
Confidence 4889999985 9999999998888999 799999988766533 333 33222 2332222 22333333323
Q ss_pred -CccEEEeCCCC
Q 024752 91 -KLNILINNAGT 101 (263)
Q Consensus 91 -~id~li~~ag~ 101 (263)
.+|++|.++|.
T Consensus 234 ~g~D~v~d~~g~ 245 (352)
T 3fpc_A 234 KGVDKVVIAGGD 245 (352)
T ss_dssp CCEEEEEECSSC
T ss_pred CCCCEEEECCCC
Confidence 69999999985
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00095 Score=57.10 Aligned_cols=100 Identities=14% Similarity=0.164 Sum_probs=65.5
Q ss_pred CCCCEEEEecCCCchHHHH-HHHH-HHCCCe-EEEeeCCch---hHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHH
Q 024752 11 LKGMTALVTGGTKGIGYAV-VEEL-AAFGAI-VHTCSRNET---ELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~-a~~l-~~~g~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 84 (263)
+++++|+|+|+ |++|... ++.+ ...|++ |++++++++ +.+.+ ++ .|. ..+ |..++ ++.+ +.++
T Consensus 171 ~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~-~~---lGa--~~v--~~~~~-~~~~-i~~~ 239 (357)
T 2b5w_A 171 WDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII-EE---LDA--TYV--DSRQT-PVED-VPDV 239 (357)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH-HH---TTC--EEE--ETTTS-CGGG-HHHH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH-HH---cCC--ccc--CCCcc-CHHH-HHHh
Confidence 45599999999 9999999 7777 678997 999999887 65543 33 333 222 44432 2223 3333
Q ss_pred HhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccc
Q 024752 85 SSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVA 152 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~ 152 (263)
. +.+|++|.++|. .+ .++.+++.+++ +|+++.++...
T Consensus 240 ---~-gg~Dvvid~~g~----------~~---------------~~~~~~~~l~~--~G~iv~~g~~~ 276 (357)
T 2b5w_A 240 ---Y-EQMDFIYEATGF----------PK---------------HAIQSVQALAP--NGVGALLGVPS 276 (357)
T ss_dssp ---S-CCEEEEEECSCC----------HH---------------HHHHHHHHEEE--EEEEEECCCCC
T ss_pred ---C-CCCCEEEECCCC----------hH---------------HHHHHHHHHhc--CCEEEEEeCCC
Confidence 2 479999999983 11 12334444444 68999998754
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0032 Score=52.28 Aligned_cols=91 Identities=9% Similarity=0.203 Sum_probs=65.7
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCc------------------hhHHHHHHHHHhc--CCceEEE
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNE------------------TELNQRIQEWKSK--GLQVSGS 67 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~------------------~~~~~~~~~~~~~--~~~~~~~ 67 (263)
-.+++++|+|.|+ ||+|..+++.|+..|. ++.++|.+. .+.+..++.+.+. ..++..+
T Consensus 32 ~kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~ 110 (292)
T 3h8v_A 32 EKIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVH 110 (292)
T ss_dssp CGGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEe
Confidence 3467889999986 7899999999999998 799999876 5666666666654 3456666
Q ss_pred eccCCCHHHHHHHHHHHHhh-c--CCCccEEEeCCC
Q 024752 68 VCDLKIRAQREKLMETVSSQ-F--DGKLNILINNAG 100 (263)
Q Consensus 68 ~~D~~~~~~~~~~~~~~~~~-~--~~~id~li~~ag 100 (263)
..+++..+.++.+++.+... . ....|+||.+..
T Consensus 111 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D 146 (292)
T 3h8v_A 111 NYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD 146 (292)
T ss_dssp CCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS
T ss_pred cccCCcHHHHHHHhhhhcccccccCCCCCEEEECCc
Confidence 67787767777766544321 1 035799987765
|
| >3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=97.22 E-value=0.0079 Score=50.50 Aligned_cols=119 Identities=13% Similarity=0.103 Sum_probs=75.0
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCC--chhHHHHHHHHHhc------CCceEEEeccCCCHHHHHH
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRN--ETELNQRIQEWKSK------GLQVSGSVCDLKIRAQREK 79 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~--~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~ 79 (263)
|.++.+++.|.|+ |.+|..++..|+..|. .|++++++ ++..+....++... ..++.. ..| .
T Consensus 4 m~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~-t~d---~----- 73 (315)
T 3tl2_A 4 MTIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIG-TSD---Y----- 73 (315)
T ss_dssp CCCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEE-ESC---G-----
T ss_pred cccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEE-cCC---H-----
Confidence 5667789999997 9999999999999999 99999999 45554444333321 112221 111 1
Q ss_pred HHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccc
Q 024752 80 LMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAG 153 (263)
Q Consensus 80 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 153 (263)
+.+ ..-|++|..+|..... ..+. .+.++.|.--...+.+.+.++ .+.+.++++|-...
T Consensus 74 ------~a~-~~aDvVIiaag~p~kp---g~~R---~dl~~~N~~i~~~i~~~i~~~---~p~a~vlvvsNPvd 131 (315)
T 3tl2_A 74 ------ADT-ADSDVVVITAGIARKP---GMSR---DDLVATNSKIMKSITRDIAKH---SPNAIIVVLTNPVD 131 (315)
T ss_dssp ------GGG-TTCSEEEECCSCCCCT---TCCH---HHHHHHHHHHHHHHHHHHHHH---CTTCEEEECCSSHH
T ss_pred ------HHh-CCCCEEEEeCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCeEEEECCChHH
Confidence 112 4689999999974322 2233 445677765555555554332 34578888875543
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=97.18 E-value=0.0073 Score=49.85 Aligned_cols=42 Identities=19% Similarity=0.181 Sum_probs=36.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHH
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE 56 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~ 56 (263)
++|.|.|+ |.+|..+|+.|++.|++|++.+|+++.+++..+.
T Consensus 5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~ 46 (283)
T 4e12_A 5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR 46 (283)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence 56777775 7899999999999999999999999888776655
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* | Back alignment and structure |
|---|
Probab=97.18 E-value=0.0025 Score=54.17 Aligned_cols=102 Identities=19% Similarity=0.249 Sum_probs=65.5
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHC-CCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC-
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAF-GAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD- 89 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~- 89 (263)
.|++++|.|+ |++|...++.+... |++|+++++++++.+.. + +.+..... |-.+ + . .+++.+..+
T Consensus 171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~-~---~lGa~~~i---~~~~-~-~---~~~v~~~t~g 237 (345)
T 3jv7_A 171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALA-R---EVGADAAV---KSGA-G-A---ADAIRELTGG 237 (345)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHH-H---HTTCSEEE---ECST-T-H---HHHHHHHHGG
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-H---HcCCCEEE---cCCC-c-H---HHHHHHHhCC
Confidence 5899999998 99999988887777 78999999998876644 2 23443222 2222 2 2 222333222
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccc
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAG 153 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 153 (263)
..+|+++.++|. .+ .++..++.+++ +|+++.++....
T Consensus 238 ~g~d~v~d~~G~----------~~---------------~~~~~~~~l~~--~G~iv~~G~~~~ 274 (345)
T 3jv7_A 238 QGATAVFDFVGA----------QS---------------TIDTAQQVVAV--DGHISVVGIHAG 274 (345)
T ss_dssp GCEEEEEESSCC----------HH---------------HHHHHHHHEEE--EEEEEECSCCTT
T ss_pred CCCeEEEECCCC----------HH---------------HHHHHHHHHhc--CCEEEEECCCCC
Confidence 379999999984 11 23344444444 689999876443
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* | Back alignment and structure |
|---|
Probab=97.17 E-value=0.0012 Score=55.67 Aligned_cols=73 Identities=22% Similarity=0.180 Sum_probs=51.4
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
|+ |+|+|++|++|...++.+...|++|+++++++++.+.+. ++ |....+..-|... +++..++.+
T Consensus 148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~~vi~~~~~~~----------~~~~~~~~~ 212 (324)
T 3nx4_A 148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLK-SL---GANRILSRDEFAE----------SRPLEKQLW 212 (324)
T ss_dssp CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH-HH---TCSEEEEGGGSSC----------CCSSCCCCE
T ss_pred Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc---CCCEEEecCCHHH----------HHhhcCCCc
Confidence 46 999999999999999999999999999999988776553 33 3333322222211 112223579
Q ss_pred cEEEeCCC
Q 024752 93 NILINNAG 100 (263)
Q Consensus 93 d~li~~ag 100 (263)
|+++.++|
T Consensus 213 d~v~d~~g 220 (324)
T 3nx4_A 213 AGAIDTVG 220 (324)
T ss_dssp EEEEESSC
T ss_pred cEEEECCC
Confidence 99999887
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0016 Score=55.68 Aligned_cols=78 Identities=19% Similarity=0.235 Sum_probs=54.1
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHC-CCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAF-GAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
.|++|+|+|+ |++|...++.+... |++|+++++++++.+... + .|.... .|.+++ +.+.+.++.. +.
T Consensus 186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~---lGa~~v---i~~~~~--~~~~v~~~~~--g~ 253 (359)
T 1h2b_A 186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-R---LGADHV---VDARRD--PVKQVMELTR--GR 253 (359)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-H---TTCSEE---EETTSC--HHHHHHHHTT--TC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-H---hCCCEE---Eeccch--HHHHHHHHhC--CC
Confidence 5899999999 89999999988888 999999999987765442 3 343322 244443 3333333221 12
Q ss_pred CccEEEeCCCC
Q 024752 91 KLNILINNAGT 101 (263)
Q Consensus 91 ~id~li~~ag~ 101 (263)
.+|++|.++|.
T Consensus 254 g~Dvvid~~G~ 264 (359)
T 1h2b_A 254 GVNVAMDFVGS 264 (359)
T ss_dssp CEEEEEESSCC
T ss_pred CCcEEEECCCC
Confidence 69999999984
|
| >3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.00041 Score=57.39 Aligned_cols=48 Identities=23% Similarity=0.189 Sum_probs=42.4
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHH
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQ 55 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~ 55 (263)
..+++++|+++|.|+ ||.|++++..|++.|+ +|.++.|+.++++++++
T Consensus 116 ~~~~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~ 164 (282)
T 3fbt_A 116 FRVEIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYG 164 (282)
T ss_dssp TTCCCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCT
T ss_pred cCCCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence 357789999999997 6899999999999999 89999999988777654
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=97.10 E-value=0.00068 Score=58.05 Aligned_cols=75 Identities=20% Similarity=0.194 Sum_probs=53.4
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
.|++|+|+|+ |++|...++.+...|++|+++++++++.+...++ .+.... .|..+.+.+ .+.. +.
T Consensus 180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~---lGa~~v---i~~~~~~~~-------~~~~-~g 244 (357)
T 2cf5_A 180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQD---LGADDY---VIGSDQAKM-------SELA-DS 244 (357)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTT---SCCSCE---EETTCHHHH-------HHST-TT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHH---cCCcee---eccccHHHH-------HHhc-CC
Confidence 6899999995 9999999998888999999999998776554322 233222 244443322 2222 47
Q ss_pred ccEEEeCCCC
Q 024752 92 LNILINNAGT 101 (263)
Q Consensus 92 id~li~~ag~ 101 (263)
+|++|.++|.
T Consensus 245 ~D~vid~~g~ 254 (357)
T 2cf5_A 245 LDYVIDTVPV 254 (357)
T ss_dssp EEEEEECCCS
T ss_pred CCEEEECCCC
Confidence 9999999985
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0038 Score=51.39 Aligned_cols=167 Identities=13% Similarity=0.129 Sum_probs=95.9
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHH-CCCeEE-EeeCCchhH--HHH-------------HHHHHh--cCCceEEEeccC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAA-FGAIVH-TCSRNETEL--NQR-------------IQEWKS--KGLQVSGSVCDL 71 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~-~g~~V~-~~~r~~~~~--~~~-------------~~~~~~--~~~~~~~~~~D~ 71 (263)
++..+|.|+|++|.+|+.+++.+.+ .|+.++ +++++.... .+. ..++.+ .+.. +..|+
T Consensus 3 ~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~~~D---vVIDf 79 (273)
T 1dih_A 3 DANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFD---VFIDF 79 (273)
T ss_dssp CCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCS---EEEEC
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhcCCC---EEEEc
Confidence 3446899999999999999999875 477765 556654320 000 000000 0122 34589
Q ss_pred CCHHHHHHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHH----------hhhHh----HHHHHHHHhHHH
Q 024752 72 KIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMT----------TNFES----AYHLSQLAHPLL 137 (263)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~----------~n~~~----~~~~~~~~~~~~ 137 (263)
+.++.....+..+.+. .+++++-..|. +.++.++..+ .|+-- .+.+++.+.++|
T Consensus 80 t~p~~~~~~~~~a~~~---G~~vVigTtG~---------~~e~~~~L~~~a~~~~vv~a~N~siGvn~~~~l~~~aa~~~ 147 (273)
T 1dih_A 80 TRPEGTLNHLAFCRQH---GKGMVIGTTGF---------DEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVM 147 (273)
T ss_dssp SCHHHHHHHHHHHHHT---TCEEEECCCCC---------CHHHHHHHHHHTTTSCEEECSCCCHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHhC---CCCEEEECCCC---------CHHHHHHHHHhcCCCCEEEEecCcHHHHHHHHHHHHHHHhc
Confidence 9999988888887764 46777767763 3333333322 12111 233444444444
Q ss_pred hhCCCceEEEEccccccccCCCCcchhhHHHHHHHHHHHHHHHHc---------------cCCcEEEEEecCccc
Q 024752 138 KSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWA---------------KDKIRVNTVAPWVIR 197 (263)
Q Consensus 138 ~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~---------------~~gi~v~~v~PG~v~ 197 (263)
.. .-.|=.+ ..+...+-..+|+.++...+.+.+.+...+. +.+|.+.+++-|.+-
T Consensus 148 ~~--~~dieii---E~Hh~~K~DaPSGTA~~~ae~i~~~~~~~~~~~~~~~r~~~~~~r~~~~i~i~s~R~g~vv 217 (273)
T 1dih_A 148 GD--YTDIEII---EAHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIV 217 (273)
T ss_dssp TT--TSEEEEE---EEECTTCCSSSCHHHHHHHHHHHHHTTCCGGGTEECCCCSCCCSCCTTCEEEEEEECTTCC
T ss_pred CC--CCCEEEE---EeecCCCCCCCCHHHHHHHHHHHHhhCCCccccccccccCccCCCCCCcceEEEEeCCCCC
Confidence 32 1122111 2233334456799999999988776654321 357899999866553
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0025 Score=55.48 Aligned_cols=78 Identities=26% Similarity=0.335 Sum_probs=54.0
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
.|++|+|+|+ |++|...++.+...|+ +|+++++++++.+.. +++ |.... .|..+.+ +.+++.+..++
T Consensus 213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~l---Ga~~v---i~~~~~~----~~~~i~~~t~g 280 (404)
T 3ip1_A 213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KEL---GADHV---IDPTKEN----FVEAVLDYTNG 280 (404)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHH---TCSEE---ECTTTSC----HHHHHHHHTTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc---CCCEE---EcCCCCC----HHHHHHHHhCC
Confidence 5899999998 9999999999889999 899999998776543 333 33322 2333322 22333333323
Q ss_pred -CccEEEeCCCC
Q 024752 91 -KLNILINNAGT 101 (263)
Q Consensus 91 -~id~li~~ag~ 101 (263)
.+|++|.++|.
T Consensus 281 ~g~D~vid~~g~ 292 (404)
T 3ip1_A 281 LGAKLFLEATGV 292 (404)
T ss_dssp CCCSEEEECSSC
T ss_pred CCCCEEEECCCC
Confidence 69999999994
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0015 Score=56.44 Aligned_cols=81 Identities=15% Similarity=0.168 Sum_probs=54.8
Q ss_pred CCCCEEEEec-CCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 11 LKGMTALVTG-GTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 11 ~~~k~vlVtG-as~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
.+|++|+|.| |+|++|...++.+...|++|+.+++++++.+.+. +.+.... .|..+++ +.+.+.++...
T Consensus 169 ~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~~---~~~~~~~-~~~~v~~~t~~-- 238 (379)
T 3iup_A 169 LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK----AQGAVHV---CNAASPT-FMQDLTEALVS-- 238 (379)
T ss_dssp HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH----HTTCSCE---EETTSTT-HHHHHHHHHHH--
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----hCCCcEE---EeCCChH-HHHHHHHHhcC--
Confidence 3588899997 9999999999998899999999999887765443 2343322 2333322 22222222221
Q ss_pred CCccEEEeCCCC
Q 024752 90 GKLNILINNAGT 101 (263)
Q Consensus 90 ~~id~li~~ag~ 101 (263)
..+|++|.++|.
T Consensus 239 ~g~d~v~d~~g~ 250 (379)
T 3iup_A 239 TGATIAFDATGG 250 (379)
T ss_dssp HCCCEEEESCEE
T ss_pred CCceEEEECCCc
Confidence 269999999984
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0032 Score=54.79 Aligned_cols=43 Identities=21% Similarity=0.266 Sum_probs=38.7
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHH
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR 53 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~ 53 (263)
++.+++|+|+|+ |.+|+.+++.+...|++|++++|+++.++..
T Consensus 169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~ 211 (401)
T 1x13_A 169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV 211 (401)
T ss_dssp EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 367999999996 8999999999999999999999999887664
|
| >3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0014 Score=53.96 Aligned_cols=43 Identities=23% Similarity=0.379 Sum_probs=38.5
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCch
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET 48 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~ 48 (263)
+...+++||.++|.|.++-+|+.++..|+.+|++|.++.|...
T Consensus 153 ~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~ 195 (285)
T 3p2o_A 153 AYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTK 195 (285)
T ss_dssp HTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS
T ss_pred HhCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCch
Confidence 4557899999999999999999999999999999999887643
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0013 Score=52.69 Aligned_cols=72 Identities=10% Similarity=-0.037 Sum_probs=55.2
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
.+.++|.|+ |.+|+.+++.|.+.|+ |++++++++..+... . .+.++..|.++++.+.++- . ...
T Consensus 9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~--~~~~i~gd~~~~~~l~~a~------i-~~a 72 (234)
T 2aef_A 9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-----S--GANFVHGDPTRVSDLEKAN------V-RGA 72 (234)
T ss_dssp -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----T--TCEEEESCTTCHHHHHHTT------C-TTC
T ss_pred CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----c--CCeEEEcCCCCHHHHHhcC------c-chh
Confidence 367888897 8999999999999999 999999988765443 1 3677889999987665541 1 467
Q ss_pred cEEEeCCC
Q 024752 93 NILINNAG 100 (263)
Q Consensus 93 d~li~~ag 100 (263)
|.+|.+.+
T Consensus 73 d~vi~~~~ 80 (234)
T 2aef_A 73 RAVIVDLE 80 (234)
T ss_dssp SEEEECCS
T ss_pred cEEEEcCC
Confidence 88887765
|
| >4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... | Back alignment and structure |
|---|
Probab=96.98 E-value=0.011 Score=50.00 Aligned_cols=120 Identities=10% Similarity=0.026 Sum_probs=77.4
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchhHHHHHHHHHhc---CCceEEEeccCCCHHHHHHHHHHH
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSK---GLQVSGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~ 84 (263)
..+.+++.|+|+ |.+|.+++..|+..|. .|+++++++++++....++... .........+ +.+
T Consensus 16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~--d~~--------- 83 (331)
T 4aj2_A 16 QVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSK--DYS--------- 83 (331)
T ss_dssp -CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECS--SGG---------
T ss_pred cCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcC--CHH---------
Confidence 456788999997 9999999999999987 8999999998888877777642 1111111111 211
Q ss_pred HhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccc
Q 024752 85 SSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAG 153 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 153 (263)
.+ ..-|++|..||.... + .++. .+.++.|.--...+.+.+..+ .+.+.++++|-...
T Consensus 84 --~~-~~aDiVvi~aG~~~k-p--G~tR---~dL~~~N~~I~~~i~~~i~~~---~p~a~vlvvtNPvd 140 (331)
T 4aj2_A 84 --VT-ANSKLVIITAGARQQ-E--GESR---LNLVQRNVNIFKFIIPNVVKY---SPQCKLLIVSNPVD 140 (331)
T ss_dssp --GG-TTEEEEEECCSCCCC-T--TCCG---GGGHHHHHHHHHHHHHHHHHH---CTTCEEEECSSSHH
T ss_pred --Hh-CCCCEEEEccCCCCC-C--CccH---HHHHHHHHHHHHHHHHHHHHH---CCCeEEEEecChHH
Confidence 12 468999999997532 2 1222 345666664444444444332 34678888876554
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0021 Score=55.27 Aligned_cols=74 Identities=16% Similarity=0.214 Sum_probs=53.6
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
.|++|||+|+ |++|...++.+...|++|+++++++++.+... ++ +.... .|..+++.+ +++ . +.
T Consensus 194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~l---Ga~~v---i~~~~~~~~----~~~---~-~g 257 (369)
T 1uuf_A 194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-AL---GADEV---VNSRNADEM----AAH---L-KS 257 (369)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HH---TCSEE---EETTCHHHH----HTT---T-TC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCcEE---eccccHHHH----HHh---h-cC
Confidence 4899999998 88999999988889999999999988876543 33 33221 355554322 222 1 47
Q ss_pred ccEEEeCCCC
Q 024752 92 LNILINNAGT 101 (263)
Q Consensus 92 id~li~~ag~ 101 (263)
+|++|.++|.
T Consensus 258 ~Dvvid~~g~ 267 (369)
T 1uuf_A 258 FDFILNTVAA 267 (369)
T ss_dssp EEEEEECCSS
T ss_pred CCEEEECCCC
Confidence 9999999985
|
| >3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0022 Score=55.27 Aligned_cols=79 Identities=16% Similarity=0.194 Sum_probs=54.3
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCC-HHHHHHHHHHHHhhcC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKI-RAQREKLMETVSSQFD 89 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 89 (263)
.|++|+|+|+ |++|...++.+...|+ +|+++++++++++.. + +.+.... .|..+ .+++.+ .+.+..+
T Consensus 193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a-~---~lGa~~v---i~~~~~~~~~~~---~i~~~~~ 261 (378)
T 3uko_A 193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA-K---KFGVNEF---VNPKDHDKPIQE---VIVDLTD 261 (378)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH-H---TTTCCEE---ECGGGCSSCHHH---HHHHHTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-H---HcCCcEE---EccccCchhHHH---HHHHhcC
Confidence 4889999998 9999999999889999 899999999887633 2 3344322 23321 122233 3333333
Q ss_pred CCccEEEeCCCC
Q 024752 90 GKLNILINNAGT 101 (263)
Q Consensus 90 ~~id~li~~ag~ 101 (263)
+.+|++|.++|.
T Consensus 262 gg~D~vid~~g~ 273 (378)
T 3uko_A 262 GGVDYSFECIGN 273 (378)
T ss_dssp SCBSEEEECSCC
T ss_pred CCCCEEEECCCC
Confidence 589999999984
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0024 Score=54.58 Aligned_cols=81 Identities=19% Similarity=0.266 Sum_probs=50.2
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC--
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD-- 89 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-- 89 (263)
.|++|||+|++|++|...++.+...|++|+.+.+..+..++..+.+++.|....+ |- .+.. .+.+.+...
T Consensus 167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi---~~---~~~~--~~~~~~~~~~~ 238 (357)
T 1zsy_A 167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVI---TE---EELR--RPEMKNFFKDM 238 (357)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEE---EH---HHHH--SGGGGGTTSSS
T ss_pred CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEE---ec---Ccch--HHHHHHHHhCC
Confidence 5899999999999999999988888999888776554332222333344443222 21 1100 112222221
Q ss_pred CCccEEEeCCC
Q 024752 90 GKLNILINNAG 100 (263)
Q Consensus 90 ~~id~li~~ag 100 (263)
+.+|++|.++|
T Consensus 239 ~~~Dvvid~~g 249 (357)
T 1zsy_A 239 PQPRLALNCVG 249 (357)
T ss_dssp CCCSEEEESSC
T ss_pred CCceEEEECCC
Confidence 24899999988
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.019 Score=48.38 Aligned_cols=116 Identities=13% Similarity=0.074 Sum_probs=71.9
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhc------CCceEEEeccCCCHHHHHHHHHH
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSK------GLQVSGSVCDLKIRAQREKLMET 83 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~ 83 (263)
++.+++.|+|+ |.+|.+++..|+..|. .|+++++++++++....++... ..++.. ..| .
T Consensus 5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-t~d---~--------- 70 (324)
T 3gvi_A 5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG-AND---Y--------- 70 (324)
T ss_dssp -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ESS---G---------
T ss_pred CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEE-eCC---H---------
Confidence 45678999998 9999999999999998 9999999998876555554431 122221 112 1
Q ss_pred HHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhh-CCCceEEEEccccc
Q 024752 84 VSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKS-AGNGNIIFISSVAG 153 (263)
Q Consensus 84 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~iv~vsS~~~ 153 (263)
+.+ ..-|++|..+|..... -+.-.+.+..|.--...+.+. +.+ ...+.++++|-...
T Consensus 71 --~a~-~~aDiVIiaag~p~k~------G~~R~dl~~~N~~i~~~i~~~----i~~~~p~a~iivvtNPvd 128 (324)
T 3gvi_A 71 --AAI-EGADVVIVTAGVPRKP------GMSRDDLLGINLKVMEQVGAG----IKKYAPEAFVICITNPLD 128 (324)
T ss_dssp --GGG-TTCSEEEECCSCCCC-----------CHHHHHHHHHHHHHHHH----HHHHCTTCEEEECCSSHH
T ss_pred --HHH-CCCCEEEEccCcCCCC------CCCHHHHHHhhHHHHHHHHHH----HHHHCCCeEEEecCCCcH
Confidence 112 4679999999864221 112233455665444444444 443 34578888876554
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0017 Score=51.03 Aligned_cols=42 Identities=26% Similarity=0.393 Sum_probs=37.4
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHH
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE 56 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~ 56 (263)
+++|+||+|.+|.++++.|++.|++|.+++|+++..++..++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~ 43 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE 43 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 588999999999999999999999999999998877766544
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0043 Score=50.36 Aligned_cols=80 Identities=14% Similarity=0.189 Sum_probs=55.8
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCc-------------------hhHHHHHHHHHhcC--CceEEEe
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNE-------------------TELNQRIQEWKSKG--LQVSGSV 68 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~-------------------~~~~~~~~~~~~~~--~~~~~~~ 68 (263)
+++++|+|.|+ ||+|.++++.|+..|. ++.+++++. .+.+..++.+.+.. .++..+.
T Consensus 26 l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~ 104 (251)
T 1zud_1 26 LLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQ 104 (251)
T ss_dssp HHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEe
Confidence 67899999998 6799999999999998 688887653 55666666666543 3455554
Q ss_pred ccCCCHHHHHHHHHHHHhhcCCCccEEEeCCC
Q 024752 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAG 100 (263)
Q Consensus 69 ~D~~~~~~~~~~~~~~~~~~~~~id~li~~ag 100 (263)
.+++. +.+.+++ ...|+||++..
T Consensus 105 ~~~~~-~~~~~~~--------~~~DvVi~~~d 127 (251)
T 1zud_1 105 QRLTG-EALKDAV--------ARADVVLDCTD 127 (251)
T ss_dssp SCCCH-HHHHHHH--------HHCSEEEECCS
T ss_pred ccCCH-HHHHHHH--------hcCCEEEECCC
Confidence 45543 3444433 24699998765
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0025 Score=54.57 Aligned_cols=75 Identities=17% Similarity=0.141 Sum_probs=52.7
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
.|++|+|+|+ |++|..+++.+...|++|+++++++++.+... ++ +.... .|..++.+ ..+++. +.
T Consensus 179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~~v---~~~~~~~~---~~~~~~----~~ 243 (360)
T 1piw_A 179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KM---GADHY---IATLEEGD---WGEKYF----DT 243 (360)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HH---TCSEE---EEGGGTSC---HHHHSC----SC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-Hc---CCCEE---EcCcCchH---HHHHhh----cC
Confidence 4899999999 99999999988889999999999988776543 33 33222 23322201 122221 47
Q ss_pred ccEEEeCCCC
Q 024752 92 LNILINNAGT 101 (263)
Q Consensus 92 id~li~~ag~ 101 (263)
+|++|.++|.
T Consensus 244 ~D~vid~~g~ 253 (360)
T 1piw_A 244 FDLIVVCASS 253 (360)
T ss_dssp EEEEEECCSC
T ss_pred CCEEEECCCC
Confidence 9999999985
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.002 Score=54.91 Aligned_cols=69 Identities=29% Similarity=0.323 Sum_probs=51.2
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
.|++|+|.|+ |++|...++.+...|++|+++++++++.+.+. +.+....+ ++.+.+. ..
T Consensus 176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~v~-----~~~~~~~-----------~~ 234 (348)
T 3two_A 176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDAL----SMGVKHFY-----TDPKQCK-----------EE 234 (348)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHH----HTTCSEEE-----SSGGGCC-----------SC
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH----hcCCCeec-----CCHHHHh-----------cC
Confidence 5899999997 99999999999999999999999998876442 23443222 2322211 26
Q ss_pred ccEEEeCCCC
Q 024752 92 LNILINNAGT 101 (263)
Q Consensus 92 id~li~~ag~ 101 (263)
+|++|.++|.
T Consensus 235 ~D~vid~~g~ 244 (348)
T 3two_A 235 LDFIISTIPT 244 (348)
T ss_dssp EEEEEECCCS
T ss_pred CCEEEECCCc
Confidence 8999999985
|
| >1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0045 Score=53.15 Aligned_cols=78 Identities=17% Similarity=0.277 Sum_probs=52.7
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
.|++|+|+|+ |++|...++.+...|+ +|+++++++++.+.. +++ +.... .|..+++ +.+++.+..++
T Consensus 190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a-~~l---Ga~~v---i~~~~~~----~~~~~~~~~~g 257 (371)
T 1f8f_A 190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQL---GATHV---INSKTQD----PVAAIKEITDG 257 (371)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHH---TCSEE---EETTTSC----HHHHHHHHTTS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHc---CCCEE---ecCCccC----HHHHHHHhcCC
Confidence 4789999995 9999999998888899 699999998776544 333 33222 2333322 22233333324
Q ss_pred CccEEEeCCCC
Q 024752 91 KLNILINNAGT 101 (263)
Q Consensus 91 ~id~li~~ag~ 101 (263)
.+|++|.++|.
T Consensus 258 g~D~vid~~g~ 268 (371)
T 1f8f_A 258 GVNFALESTGS 268 (371)
T ss_dssp CEEEEEECSCC
T ss_pred CCcEEEECCCC
Confidence 79999999983
|
| >4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major} | Back alignment and structure |
|---|
Probab=96.86 E-value=0.028 Score=47.71 Aligned_cols=121 Identities=14% Similarity=0.109 Sum_probs=72.3
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCC-------eEEEeeCCch--hHHHHHHHHHhcCCc--eEEEeccCCCHHH
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGA-------IVHTCSRNET--ELNQRIQEWKSKGLQ--VSGSVCDLKIRAQ 76 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~-------~V~~~~r~~~--~~~~~~~~~~~~~~~--~~~~~~D~~~~~~ 76 (263)
+-+++.-+|.|+||+|+||..++..|++... .+.+++.++. .++-...++...... ...... ++.
T Consensus 19 ~~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~--~~~-- 94 (345)
T 4h7p_A 19 PGSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVT--ADP-- 94 (345)
T ss_dssp ---CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEE--SCH--
T ss_pred CCCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEc--CCh--
Confidence 3446667999999999999999999998643 6899998764 344455555543211 111111 121
Q ss_pred HHHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC--CCceEEEEccc
Q 024752 77 REKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA--GNGNIIFISSV 151 (263)
Q Consensus 77 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~iv~vsS~ 151 (263)
... + ..-|++|..||.... + .++. ++.++.|. .+++.+.+.+.+. +...|+.+|-.
T Consensus 95 -~~a-------~-~~advVvi~aG~prk-p--GmtR---~DLl~~Na----~I~~~~~~~i~~~a~~~~~vlvvsNP 152 (345)
T 4h7p_A 95 -RVA-------F-DGVAIAIMCGAFPRK-A--GMER---KDLLEMNA----RIFKEQGEAIAAVAASDCRVVVVGNP 152 (345)
T ss_dssp -HHH-------T-TTCSEEEECCCCCCC-T--TCCH---HHHHHHHH----HHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred -HHH-------h-CCCCEEEECCCCCCC-C--CCCH---HHHHHHhH----HHHHHHHHHHHhhccCceEEEEeCCC
Confidence 111 2 468999999997532 2 2344 44577776 4455555555553 34466666654
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=96.85 E-value=0.026 Score=47.47 Aligned_cols=119 Identities=11% Similarity=0.062 Sum_probs=74.2
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhc----CCceEEEeccCCCHHHHHHHHHHHH
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSK----GLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
|+.+++.|+|+ |.+|.+++..|+..|. .|+++++++++++....++... +........+ +.
T Consensus 3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~--d~----------- 68 (321)
T 3p7m_A 3 MARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTN--DY----------- 68 (321)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES--CG-----------
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcC--CH-----------
Confidence 34578889995 9999999999999988 9999999998877666666532 1122211111 11
Q ss_pred hhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccc
Q 024752 86 SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAG 153 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 153 (263)
+.+ ..-|++|..+|..... ..+. .+.+..|.--...+.+.+..+ .+.+.+++++-...
T Consensus 69 ~a~-~~aDvVIi~ag~p~k~---G~~R---~dl~~~N~~i~~~i~~~i~~~---~p~a~vivvtNPvd 126 (321)
T 3p7m_A 69 KDL-ENSDVVIVTAGVPRKP---GMSR---DDLLGINIKVMQTVGEGIKHN---CPNAFVICITNPLD 126 (321)
T ss_dssp GGG-TTCSEEEECCSCCCCT---TCCH---HHHHHHHHHHHHHHHHHHHHH---CTTCEEEECCSSHH
T ss_pred HHH-CCCCEEEEcCCcCCCC---CCCH---HHHHHHhHHHHHHHHHHHHHH---CCCcEEEEecCchH
Confidence 112 4579999999964321 1233 334566665444444444332 24578888765543
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=96.82 E-value=0.008 Score=51.65 Aligned_cols=43 Identities=21% Similarity=0.142 Sum_probs=38.7
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHH
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRI 54 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~ 54 (263)
+++++|+|.|+ |.+|..+++.+...|++|++++|++++++...
T Consensus 182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~ 224 (381)
T 3p2y_A 182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVR 224 (381)
T ss_dssp ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHH
T ss_pred cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 47899999999 79999999999999999999999998876654
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0018 Score=54.43 Aligned_cols=73 Identities=15% Similarity=0.228 Sum_probs=50.2
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
.|++|+|+||+|++|...++.+...|++|+.++++. + .+.++++ +.... .|..+.+... +.. ..
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~-~~~~~~l---Ga~~~---i~~~~~~~~~-------~~~-~g 215 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-N-HAFLKAL---GAEQC---INYHEEDFLL-------AIS-TP 215 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-H-HHHHHHH---TCSEE---EETTTSCHHH-------HCC-SC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-h-HHHHHHc---CCCEE---EeCCCcchhh-------hhc-cC
Confidence 589999999999999999999999999999888543 3 3333333 33322 2444332121 111 46
Q ss_pred ccEEEeCCC
Q 024752 92 LNILINNAG 100 (263)
Q Consensus 92 id~li~~ag 100 (263)
+|+++.++|
T Consensus 216 ~D~v~d~~g 224 (321)
T 3tqh_A 216 VDAVIDLVG 224 (321)
T ss_dssp EEEEEESSC
T ss_pred CCEEEECCC
Confidence 999999998
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0064 Score=52.73 Aligned_cols=79 Identities=16% Similarity=0.236 Sum_probs=53.3
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
.|++|+|.|+ |++|...++.+...|+ +|+++++++++++... +.+. .. .|..+.+.+.+ ++.+..++
T Consensus 185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~----~lGa--~~--i~~~~~~~~~~---~~~~~~~g 252 (398)
T 2dph_A 185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLS----DAGF--ET--IDLRNSAPLRD---QIDQILGK 252 (398)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH----TTTC--EE--EETTSSSCHHH---HHHHHHSS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH----HcCC--cE--EcCCCcchHHH---HHHHHhCC
Confidence 5899999996 9999999998888899 8999999988765432 3344 22 34443221112 22222223
Q ss_pred -CccEEEeCCCCC
Q 024752 91 -KLNILINNAGTF 102 (263)
Q Consensus 91 -~id~li~~ag~~ 102 (263)
.+|++|.++|..
T Consensus 253 ~g~Dvvid~~g~~ 265 (398)
T 2dph_A 253 PEVDCGVDAVGFE 265 (398)
T ss_dssp SCEEEEEECSCTT
T ss_pred CCCCEEEECCCCc
Confidence 699999999853
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0013 Score=53.48 Aligned_cols=43 Identities=21% Similarity=0.258 Sum_probs=37.8
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHH
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRI 54 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~ 54 (263)
++++ +++|.|+ ||.|++++..|++.|+ +|.+++|+.++.+++.
T Consensus 106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la 149 (253)
T 3u62_A 106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALD 149 (253)
T ss_dssp CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCC
T ss_pred CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence 5788 8999987 8999999999999999 8999999988766554
|
| >1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1 | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0028 Score=54.29 Aligned_cols=47 Identities=23% Similarity=0.308 Sum_probs=42.1
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHH
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEW 57 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~ 57 (263)
+++||+++|.|. |.+|+.+|+.|.+.|++|++.+++.+++++..+++
T Consensus 170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ 216 (364)
T 1leh_A 170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE 216 (364)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence 799999999997 78999999999999999999999988877776654
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0041 Score=52.65 Aligned_cols=49 Identities=10% Similarity=-0.110 Sum_probs=40.0
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHH
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEW 57 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~ 57 (263)
.|..+.+++.|.|+ |.+|.+++..|++.|. +|.+++++++.++....++
T Consensus 4 ~~~~~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l 53 (331)
T 1pzg_A 4 ALVQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDL 53 (331)
T ss_dssp CCCSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHH
T ss_pred CcCCCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHH
Confidence 34444568999998 9999999999999998 9999999998877644443
|
| >4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=96.77 E-value=0.047 Score=44.77 Aligned_cols=164 Identities=10% Similarity=0.116 Sum_probs=96.2
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHC-CCeEEE-eeCCch---------------------hHHHHHHHHHhcCCceEEEe
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAF-GAIVHT-CSRNET---------------------ELNQRIQEWKSKGLQVSGSV 68 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~-g~~V~~-~~r~~~---------------------~~~~~~~~~~~~~~~~~~~~ 68 (263)
+-.+|.|.|++|.+|+.+++.+.+. +..++. ++|+.. .++++.+ . .++ .
T Consensus 6 ~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~---~--~DV---V 77 (272)
T 4f3y_A 6 SSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCA---E--ADY---L 77 (272)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHH---H--CSE---E
T ss_pred cccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhc---C--CCE---E
Confidence 3467999999999999999998875 566555 677632 2233322 1 222 4
Q ss_pred ccCCCHHHHHHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHH----------HhhhHhHHHHHHHHhHHHh
Q 024752 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVM----------TTNFESAYHLSQLAHPLLK 138 (263)
Q Consensus 69 ~D~~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~----------~~n~~~~~~~~~~~~~~~~ 138 (263)
.|+|.++.....+..+.+. .+.+|+-+.|. +.++.++.- ..|+.=-++++..++....
T Consensus 78 IDfT~p~a~~~~~~~al~~---G~~vVigTTG~---------s~~~~~~L~~aa~~~~vv~a~N~s~Gv~l~~~~~~~aa 145 (272)
T 4f3y_A 78 IDFTLPEGTLVHLDAALRH---DVKLVIGTTGF---------SEPQKAQLRAAGEKIALVFSANMSVGVNVTMKLLEFAA 145 (272)
T ss_dssp EECSCHHHHHHHHHHHHHH---TCEEEECCCCC---------CHHHHHHHHHHTTTSEEEECSCCCHHHHHHHHHHHHHH
T ss_pred EEcCCHHHHHHHHHHHHHc---CCCEEEECCCC---------CHHHHHHHHHHhccCCEEEECCCCHHHHHHHHHHHHHH
Confidence 6899999988888887765 47888888774 333333322 2244434444444444333
Q ss_pred hCC-CceEEEEccccccccCCCCcchhhHHHHHHHHHHHHHHHH---------------ccCCcEEEEEecCccc
Q 024752 139 SAG-NGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEW---------------AKDKIRVNTVAPWVIR 197 (263)
Q Consensus 139 ~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~---------------~~~gi~v~~v~PG~v~ 197 (263)
+.= ...=|-+- ..+...+-..+-+.+....+.+.+.+...+ .+.+|.+.+++-|.+-
T Consensus 146 ~~l~~~~diei~--E~HH~~K~DaPSGTA~~la~~i~~~~~~~~~~~~~~~r~g~~g~r~~~~i~i~s~R~g~iv 218 (272)
T 4f3y_A 146 KQFAQGYDIEII--EAHHRHKVDAPSGTALMMGETIAAATGRSLDDCAVYGRHGVTGERDPSTIGFSAIRGGDIV 218 (272)
T ss_dssp HHTSSSCEEEEE--EEECTTCCSSSCHHHHHHHHHHHHTTTCCHHHHEEECCCSCCCSCCTTCEEEEEEECTTCC
T ss_pred HhcCcCCCEEEE--EecCCCCCCCCCHHHHHHHHHHHHHhCcccccccccccccccCCCCCCccCEEEEECCCCc
Confidence 311 11111111 222333344556777777777766543322 1346889999987653
|
| >1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0044 Score=53.71 Aligned_cols=79 Identities=19% Similarity=0.332 Sum_probs=53.6
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC-
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD- 89 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~- 89 (263)
.|++|+|.|+ |++|...++.+...|+ +|+++++++++++.. ++ .|.. . .|.++.+.+.+ ++.+..+
T Consensus 185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a-~~---lGa~--~--i~~~~~~~~~~---~v~~~t~g 252 (398)
T 1kol_A 185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA-KA---QGFE--I--ADLSLDTPLHE---QIAALLGE 252 (398)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HH---TTCE--E--EETTSSSCHHH---HHHHHHSS
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH-HH---cCCc--E--EccCCcchHHH---HHHHHhCC
Confidence 5899999995 9999999998888999 799999998776544 22 3442 2 34443322222 2222222
Q ss_pred CCccEEEeCCCCC
Q 024752 90 GKLNILINNAGTF 102 (263)
Q Consensus 90 ~~id~li~~ag~~ 102 (263)
..+|++|.++|..
T Consensus 253 ~g~Dvvid~~G~~ 265 (398)
T 1kol_A 253 PEVDCAVDAVGFE 265 (398)
T ss_dssp SCEEEEEECCCTT
T ss_pred CCCCEEEECCCCc
Confidence 3699999999854
|
| >3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0032 Score=51.81 Aligned_cols=42 Identities=31% Similarity=0.361 Sum_probs=37.5
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE 47 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~ 47 (263)
+...+++||.++|.|.++-+|+.++..|..+|++|.++.|..
T Consensus 154 ~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t 195 (285)
T 3l07_A 154 EYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT 195 (285)
T ss_dssp HTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred HhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence 455789999999999999999999999999999999887653
|
| >3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 | Back alignment and structure |
|---|
Probab=96.64 E-value=0.069 Score=44.99 Aligned_cols=119 Identities=10% Similarity=0.001 Sum_probs=74.5
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchhHHHHHHHHHhc---CCceEEE-eccCCCHHHHHHHHH
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSK---GLQVSGS-VCDLKIRAQREKLME 82 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~-~~D~~~~~~~~~~~~ 82 (263)
.....+++.|+|+ |.+|..++..|+..|. .|++++++++.++....++... ....... ..|..+
T Consensus 17 ~~~~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~--------- 86 (330)
T 3ldh_A 17 EPRSYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV--------- 86 (330)
T ss_dssp CCCCCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS---------
T ss_pred ccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH---------
Confidence 3335678999999 9999999999999997 8999999998887776666542 1111111 223221
Q ss_pred HHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhh-CCCceEEEEccccc
Q 024752 83 TVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKS-AGNGNIIFISSVAG 153 (263)
Q Consensus 83 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~iv~vsS~~~ 153 (263)
+ ..-|++|..||...... ++. .+.+..|.-- .+.+.+.+.+ ...+.++++|-...
T Consensus 87 -----~-~daDiVIitaG~p~kpG---~tR---~dll~~N~~I----~k~i~~~I~k~~P~a~ilvvtNPvd 142 (330)
T 3ldh_A 87 -----S-AGSKLVVITAGARQQEG---ESR---LNLVQRNVNI----FKFIIPNIVKHSPDCLKELHPELGT 142 (330)
T ss_dssp -----C-SSCSEEEECCSCCCCSS---CCT---TGGGHHHHHH----HHHHHHHHHHHCTTCEEEECSSSHH
T ss_pred -----h-CCCCEEEEeCCCCCCCC---CCH---HHHHHhhHHH----HHHHHHHHHhhCCCceEEeCCCccH
Confidence 2 46899999999753221 122 2234445433 3444444443 34677888876543
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0048 Score=53.91 Aligned_cols=74 Identities=18% Similarity=0.141 Sum_probs=53.9
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
+..|+|.|. |-+|+.+++.|.+.|+.|++++++++..+...+ .+ +.++..|.++++.+.++- ..+.
T Consensus 4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~g--~~vi~GDat~~~~L~~ag-------i~~A 69 (413)
T 3l9w_A 4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----FG--MKVFYGDATRMDLLESAG-------AAKA 69 (413)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----TT--CCCEESCTTCHHHHHHTT-------TTTC
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----CC--CeEEEcCCCCHHHHHhcC-------CCcc
Confidence 356888887 779999999999999999999999987665542 22 345667888877655541 1356
Q ss_pred cEEEeCCC
Q 024752 93 NILINNAG 100 (263)
Q Consensus 93 d~li~~ag 100 (263)
|++|.+.+
T Consensus 70 ~~viv~~~ 77 (413)
T 3l9w_A 70 EVLINAID 77 (413)
T ss_dssp SEEEECCS
T ss_pred CEEEECCC
Confidence 77766655
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=96.59 E-value=0.01 Score=49.35 Aligned_cols=84 Identities=6% Similarity=0.003 Sum_probs=58.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHH-------HHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE-------WKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
+++.|.| .|.+|..+++.|++.|++|++.+|++++.+.+.+. ..+.-. +..+..-+.++..++.+++.+..
T Consensus 16 ~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~~~l~~ 93 (296)
T 3qha_A 16 LKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVVGELAG 93 (296)
T ss_dssp CCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHHHHHHT
T ss_pred CeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHHHHHHH
Confidence 4566776 58899999999999999999999999887765432 111111 34445556667778888877776
Q ss_pred hcCCCccEEEeCCC
Q 024752 87 QFDGKLNILINNAG 100 (263)
Q Consensus 87 ~~~~~id~li~~ag 100 (263)
.. .+-.++|++..
T Consensus 94 ~l-~~g~ivv~~st 106 (296)
T 3qha_A 94 HA-KPGTVIAIHST 106 (296)
T ss_dssp TC-CTTCEEEECSC
T ss_pred hc-CCCCEEEEeCC
Confidence 54 33456666654
|
| >3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* | Back alignment and structure |
|---|
Probab=96.58 E-value=0.013 Score=49.65 Aligned_cols=36 Identities=22% Similarity=0.375 Sum_probs=31.6
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCc
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNE 47 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~ 47 (263)
+++++|+|.|+ ||+|.++++.|+..|. ++.+++++.
T Consensus 32 L~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 32 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp HHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred HhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 57899999987 6899999999999998 688888764
|
| >1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* | Back alignment and structure |
|---|
Probab=96.56 E-value=0.059 Score=44.70 Aligned_cols=114 Identities=9% Similarity=-0.049 Sum_probs=70.5
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchhHHHHHHHHHh----cCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKS----KGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
++.|+|+ |.+|.+++..|++.|. .|.+.+++++.++....++.. .......... +|.+ + +
T Consensus 2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~----a-------~ 67 (294)
T 1oju_A 2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYS----L-------L 67 (294)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGG----G-------G
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCHH----H-------h
Confidence 5889999 9999999999999998 899999999887644433332 1122221111 1111 1 1
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-CCceEEEEccccc
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-GNGNIIFISSVAG 153 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~ 153 (263)
..-|++|..+|..... ..+. .+.+..|.- +++.+.+.+.+. +.+.++++|-...
T Consensus 68 -~~aDiVViaag~~~kp---G~~R---~dl~~~N~~----i~~~i~~~i~~~~p~a~iivvsNPvd 122 (294)
T 1oju_A 68 -KGSEIIVVTAGLARKP---GMTR---LDLAHKNAG----IIKDIAKKIVENAPESKILVVTNPMD 122 (294)
T ss_dssp -TTCSEEEECCCCCCCS---SCCH---HHHHHHHHH----HHHHHHHHHHTTSTTCEEEECSSSHH
T ss_pred -CCCCEEEECCCCCCCC---CCcH---HHHHHHHHH----HHHHHHHHHHhhCCCeEEEEeCCcch
Confidence 4579999999975321 1233 334666654 444444444543 4577888876543
|
| >3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae} | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0059 Score=53.95 Aligned_cols=82 Identities=23% Similarity=0.233 Sum_probs=55.9
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
..+++++|+++|.|. |+.|.++|+.|.++|++|.+.+++........+.+++.+..+. ..... + +
T Consensus 3 ~~~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~--~g~~~--~----------~ 67 (451)
T 3lk7_A 3 TITTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVV--CGSHP--L----------E 67 (451)
T ss_dssp -CCTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEE--ESCCC--G----------G
T ss_pred chhhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEE--ECCCh--H----------H
Confidence 446789999999999 7889999999999999999999976432233445555554332 12111 0 0
Q ss_pred hcCCCccEEEeCCCCCC
Q 024752 87 QFDGKLNILINNAGTFI 103 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~ 103 (263)
.+.+..|.||.+.|+..
T Consensus 68 ~~~~~~d~vv~spgi~~ 84 (451)
T 3lk7_A 68 LLDEDFCYMIKNPGIPY 84 (451)
T ss_dssp GGGSCEEEEEECTTSCT
T ss_pred hhcCCCCEEEECCcCCC
Confidence 11123899999999854
|
| >1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.51 E-value=0.014 Score=49.00 Aligned_cols=120 Identities=12% Similarity=0.021 Sum_probs=68.9
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
+..+|.|+|+ |.+|..++..|+..|. .|+++|+++++++....++....... ..+.++. .+ .+.+
T Consensus 6 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~--~~~~i~~-~~--------~~a~- 72 (318)
T 1y6j_A 6 SRSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFM--GQMSLYA-GD--------YSDV- 72 (318)
T ss_dssp -CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCT--TCEEEC---C--------GGGG-
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhc--CCeEEEE-CC--------HHHh-
Confidence 3457888998 9999999999999987 89999999877665555554321100 0111111 00 1112
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccc
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAG 153 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 153 (263)
..-|++|..+|.... + ..+ -.+.+..|+--...+++.+.++ ..++.++++|-...
T Consensus 73 ~~aDvVii~~g~p~k-~--g~~---r~dl~~~n~~i~~~i~~~i~~~---~p~a~viv~tNPv~ 127 (318)
T 1y6j_A 73 KDCDVIVVTAGANRK-P--GET---RLDLAKKNVMIAKEVTQNIMKY---YNHGVILVVSNPVD 127 (318)
T ss_dssp TTCSEEEECCCC---------C---HHHHHHHHHHHHHHHHHHHHHH---CCSCEEEECSSSHH
T ss_pred CCCCEEEEcCCCCCC-C--CcC---HHHHHHhhHHHHHHHHHHHHHh---CCCcEEEEecCcHH
Confidence 568999999996432 1 112 2345666666555555555443 34677777655443
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0082 Score=51.89 Aligned_cols=43 Identities=19% Similarity=0.203 Sum_probs=38.8
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHH
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR 53 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~ 53 (263)
++.+++|+|.|+ |.+|+.+++.+...|++|++++|++.+.+..
T Consensus 169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~ 211 (384)
T 1l7d_A 169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQV 211 (384)
T ss_dssp EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 578999999996 8999999999999999999999998876654
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.44 E-value=0.014 Score=50.60 Aligned_cols=43 Identities=16% Similarity=0.227 Sum_probs=38.3
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHH
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRI 54 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~ 54 (263)
+++.+|+|.|+ |.+|..+++.+...|++|+++++++.+++...
T Consensus 188 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~ 230 (405)
T 4dio_A 188 VPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVA 230 (405)
T ss_dssp ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence 56889999999 79999999999999999999999998766553
|
| >3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* | Back alignment and structure |
|---|
Probab=96.43 E-value=0.091 Score=43.93 Aligned_cols=116 Identities=14% Similarity=0.041 Sum_probs=71.6
Q ss_pred EEEEecCCCchHHHHHHHHHHC-C--CeEEEeeCCchhHHHHHHHHHhcCCceEEEec-cCCCHHHHHHHHHHHHhhcCC
Q 024752 15 TALVTGGTKGIGYAVVEELAAF-G--AIVHTCSRNETELNQRIQEWKSKGLQVSGSVC-DLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~-g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-D~~~~~~~~~~~~~~~~~~~~ 90 (263)
+|.|+||+|.+|.+++..|++. + ..++++++++ ..+-...++......+..... .-.+.+ .+ .
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~~~~~~~~----~~--------~ 68 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATP----AL--------E 68 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEECSSCCHH----HH--------T
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEecCCCcHH----Hh--------C
Confidence 6889999999999999999876 5 3799999987 444445555543222222111 101111 11 4
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccc
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVA 152 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~ 152 (263)
..|++|..||.... + .++ -.+.++.|.--...+.+.+.++ .+.+.+++++-..
T Consensus 69 ~aDivii~ag~~rk-p--G~~---R~dll~~N~~I~~~i~~~i~~~---~p~a~vlvvtNPv 121 (312)
T 3hhp_A 69 GADVVLISAGVARK-P--GMD---RSDLFNVNAGIVKNLVQQVAKT---CPKACIGIITNPV 121 (312)
T ss_dssp TCSEEEECCSCSCC-T--TCC---HHHHHHHHHHHHHHHHHHHHHH---CTTSEEEECSSCH
T ss_pred CCCEEEEeCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHHHH---CCCcEEEEecCcc
Confidence 68999999996422 1 123 3556777775555555555333 3457888887644
|
| >4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.41 E-value=0.032 Score=47.14 Aligned_cols=80 Identities=15% Similarity=0.193 Sum_probs=52.1
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAI-VHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
..|++|+|.|+ |++|...++.+...|+. ++.+++++++++.. + +.|....+ |.++. +..+....+.+.
T Consensus 159 ~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a-~---~lGa~~~i---~~~~~-~~~~~~~~~~~~-- 227 (346)
T 4a2c_A 159 CENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALA-K---SFGAMQTF---NSSEM-SAPQMQSVLREL-- 227 (346)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-H---HTTCSEEE---ETTTS-CHHHHHHHHGGG--
T ss_pred CCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHHH-H---HcCCeEEE---eCCCC-CHHHHHHhhccc--
Confidence 46899999987 89999999999899986 56788887765433 3 33444332 33222 222333333332
Q ss_pred CCccEEEeCCCC
Q 024752 90 GKLNILINNAGT 101 (263)
Q Consensus 90 ~~id~li~~ag~ 101 (263)
...|+++.++|.
T Consensus 228 ~g~d~v~d~~G~ 239 (346)
T 4a2c_A 228 RFNQLILETAGV 239 (346)
T ss_dssp CSSEEEEECSCS
T ss_pred CCcccccccccc
Confidence 468999999883
|
| >4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=96.40 E-value=0.0035 Score=51.52 Aligned_cols=43 Identities=28% Similarity=0.302 Sum_probs=38.2
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCch
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET 48 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~ 48 (263)
+...+++||.++|.|.++-+|+.++..|+..|++|.++.+...
T Consensus 154 ~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~ 196 (286)
T 4a5o_A 154 STGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTR 196 (286)
T ss_dssp HTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCS
T ss_pred HhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCc
Confidence 4567899999999999999999999999999999999877543
|
| >3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* | Back alignment and structure |
|---|
Probab=96.39 E-value=0.076 Score=44.51 Aligned_cols=117 Identities=11% Similarity=0.087 Sum_probs=71.1
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchhHHHHHHHHHhc----CCceEEEeccCCCHHHHHHHHHHHH
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSK----GLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
+..+|.|+|+ |.+|..++..|+..|. .|.++++++++++....++... +.++... .| +.
T Consensus 5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~~--~~----------- 69 (317)
T 3d0o_A 5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVK-AG--EY----------- 69 (317)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEE-EC--CG-----------
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEE-eC--CH-----------
Confidence 4568999998 9999999999999885 8999999987776555554431 1222222 22 11
Q ss_pred hhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccc
Q 024752 86 SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAG 153 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 153 (263)
+.+ ..-|++|..+|..... ..+.. ..+..|.--...+.+.+.++ ..++.++++|-...
T Consensus 70 ~a~-~~aDvVvi~ag~~~~~---g~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~viv~tNPv~ 127 (317)
T 3d0o_A 70 SDC-HDADLVVICAGAAQKP---GETRL---DLVSKNLKIFKSIVGEVMAS---KFDGIFLVATNPVD 127 (317)
T ss_dssp GGG-TTCSEEEECCCCCCCT---TCCHH---HHHHHHHHHHHHHHHHHHHT---TCCSEEEECSSSHH
T ss_pred HHh-CCCCEEEECCCCCCCC---CCcHH---HHHHHHHHHHHHHHHHHHHh---CCCcEEEEecCcHH
Confidence 112 4689999999975322 12332 34555554444444444332 34567777665443
|
| >3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=96.39 E-value=0.054 Score=44.54 Aligned_cols=83 Identities=16% Similarity=0.088 Sum_probs=57.7
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCC---eEEEeeCCchhHHHHHHHHH--------h--cCCceEEEeccCCCHHHHHH
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGA---IVHTCSRNETELNQRIQEWK--------S--KGLQVSGSVCDLKIRAQREK 79 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~---~V~~~~r~~~~~~~~~~~~~--------~--~~~~~~~~~~D~~~~~~~~~ 79 (263)
.+++.|.|+ |.+|.++++.|++.|+ +|++++|++++.++..++.. + ...++.++.+ .+..+..
T Consensus 3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~~~ 78 (280)
T 3tri_A 3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQIKM 78 (280)
T ss_dssp CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGHHH
T ss_pred CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHHHH
Confidence 466778877 8999999999999998 89999999998877765311 0 1233333333 3566777
Q ss_pred HHHHHHhh-cCCCcc-EEEeCCCC
Q 024752 80 LMETVSSQ-FDGKLN-ILINNAGT 101 (263)
Q Consensus 80 ~~~~~~~~-~~~~id-~li~~ag~ 101 (263)
+++++... + +.+ ++|++++.
T Consensus 79 vl~~l~~~~l--~~~~iiiS~~ag 100 (280)
T 3tri_A 79 VCEELKDILS--ETKILVISLAVG 100 (280)
T ss_dssp HHHHHHHHHH--TTTCEEEECCTT
T ss_pred HHHHHHhhcc--CCCeEEEEecCC
Confidence 88877765 4 234 77776553
|
| >2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A* | Back alignment and structure |
|---|
Probab=96.37 E-value=0.077 Score=43.95 Aligned_cols=113 Identities=8% Similarity=-0.066 Sum_probs=71.8
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchhHHHHHHHHHh----cCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKS----KGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
+|.|+|+ |++|..++..|+.++. .++++|.+++..+-.+.++.. .+........+ +.++ +
T Consensus 2 KV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~--d~~~-----------~ 67 (294)
T 2x0j_A 2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DYSL-----------L 67 (294)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEES--CGGG-----------G
T ss_pred EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCC--CHHH-----------h
Confidence 5778895 9999999999998875 699999998877766666654 22222222221 1111 1
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-CCceEEEEcccc
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-GNGNIIFISSVA 152 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~ 152 (263)
..-|++|..||....+ .++. .+.++.|.- +++.+.+.+.+. .++.++.+|-..
T Consensus 68 -~~aDvVvitAG~prkp---GmtR---~dLl~~Na~----I~~~i~~~i~~~~p~aivlvvsNPv 121 (294)
T 2x0j_A 68 -KGSEIIVVTAGLARKP---GMTR---LDLAHKNAG----IIKDIAKKIVENAPESKILVVTNPM 121 (294)
T ss_dssp -TTCSEEEECCCCCCCS---SSCH---HHHHHHHHH----HHHHHHHHHHTTSTTCEEEECSSSH
T ss_pred -CCCCEEEEecCCCCCC---CCch---HHHHHHHHH----HHHHHHHHHHhcCCceEEEEecCcc
Confidence 4579999999975322 2344 445677764 455555555554 356677776554
|
| >2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=96.35 E-value=0.1 Score=43.86 Aligned_cols=118 Identities=8% Similarity=0.010 Sum_probs=73.9
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchhHHHHHHHHHhcC---CceEEEeccCCCHHHHHHHHHHHH
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKG---LQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
-+..+|.|+|+ |.+|.+++..|+..+. .++++++++++++....++.... .++... .| +.+
T Consensus 7 ~~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~~--~~~---------- 72 (326)
T 2zqz_A 7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIY-SA--EYS---------- 72 (326)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-EC--CGG----------
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEE-EC--CHH----------
Confidence 34578999999 9999999999998886 79999999988887777665421 222222 22 111
Q ss_pred hhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccc
Q 024752 86 SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAG 153 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 153 (263)
.+ ..-|++|..+|..... ..+. ...+..|.--...+.+.+..+ ...+.++++|-...
T Consensus 73 -a~-~~aDvVii~ag~~~k~---g~~R---~dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNPv~ 129 (326)
T 2zqz_A 73 -DA-KDADLVVITAGAPQKP---GETR---LDLVNKNLKILKSIVDPIVDS---GFNGIFLVAANPVD 129 (326)
T ss_dssp -GG-GGCSEEEECCCCC--------CH---HHHHHHHHHHHHHHHHHHHHH---TCCSEEEECSSSHH
T ss_pred -Hh-CCCCEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHH---CCCeEEEEeCCcHH
Confidence 12 4679999999974221 1222 334556655444444444332 34678888766554
|
| >2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A | Back alignment and structure |
|---|
Probab=96.34 E-value=0.0029 Score=52.10 Aligned_cols=47 Identities=28% Similarity=0.231 Sum_probs=40.8
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHH
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQ 55 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~ 55 (263)
..++++++++|.|+ |++|+++++.|.+.|++|.+++|++++.+++.+
T Consensus 124 ~~~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~ 170 (275)
T 2hk9_A 124 IPEVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQ 170 (275)
T ss_dssp CTTGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTT
T ss_pred CCCcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHH
Confidence 45788999999996 799999999999999999999999887666543
|
| >3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} | Back alignment and structure |
|---|
Probab=96.32 E-value=0.088 Score=44.08 Aligned_cols=114 Identities=13% Similarity=0.096 Sum_probs=69.9
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchhHHHHHHHHHhc----CCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSK----GLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
++.|+|+ |.+|.+++..|++.|. .|+++++++++++....++... .........|. . +.+
T Consensus 2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~--~-----------~a~ 67 (314)
T 3nep_X 2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTND--Y-----------GPT 67 (314)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESS--S-----------GGG
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCC--H-----------HHh
Confidence 5789996 9999999999999987 8999999998877665555431 12222221221 1 112
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-CCceEEEEccccc
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-GNGNIIFISSVAG 153 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~ 153 (263)
..-|++|..+|.... + -++-.+.++.|.--. +.+.+.+.+. +.+.++++|-...
T Consensus 68 -~~aDvVii~ag~~~k-p-----G~~R~dl~~~N~~i~----~~i~~~i~~~~p~a~vivvtNPvd 122 (314)
T 3nep_X 68 -EDSDVCIITAGLPRS-P-----GMSRDDLLAKNTEIV----GGVTEQFVEGSPDSTIIVVANPLD 122 (314)
T ss_dssp -TTCSEEEECCCC-------------CHHHHHHHHHHH----HHHHHHHHTTCTTCEEEECCSSHH
T ss_pred -CCCCEEEECCCCCCC-C-----CCCHHHHHHhhHHHH----HHHHHHHHHhCCCcEEEecCCchh
Confidence 468999999996422 1 122345566666444 4444444443 4577787776543
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=96.32 E-value=0.01 Score=52.61 Aligned_cols=74 Identities=9% Similarity=0.137 Sum_probs=58.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
++++|.|+ |-+|+.+|+.|.++|++|++++++++.++.+.+++ .+..+..|.++++.++++=- .+-|
T Consensus 4 M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-----~~~~i~Gd~~~~~~L~~Agi-------~~ad 70 (461)
T 4g65_A 4 MKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-----DLRVVNGHASHPDVLHEAGA-------QDAD 70 (461)
T ss_dssp EEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-----SCEEEESCTTCHHHHHHHTT-------TTCS
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-----CcEEEEEcCCCHHHHHhcCC-------CcCC
Confidence 46788887 67899999999999999999999998887765543 36778899999988777621 4678
Q ss_pred EEEeCCC
Q 024752 94 ILINNAG 100 (263)
Q Consensus 94 ~li~~ag 100 (263)
++|...+
T Consensus 71 ~~ia~t~ 77 (461)
T 4g65_A 71 MLVAVTN 77 (461)
T ss_dssp EEEECCS
T ss_pred EEEEEcC
Confidence 8876655
|
| >4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A* | Back alignment and structure |
|---|
Probab=96.30 E-value=0.042 Score=46.46 Aligned_cols=79 Identities=19% Similarity=0.165 Sum_probs=49.8
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHC-CCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAF-GAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
..|++++|.|+ |++|...+..++.. |++|+++++++++++... +.+....+ |-++++..+ ++.+..+
T Consensus 162 ~~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~----~~Ga~~~i---~~~~~~~~~----~v~~~t~ 229 (348)
T 4eez_A 162 KPGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAK----KIGADVTI---NSGDVNPVD----EIKKITG 229 (348)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHH----HTTCSEEE---EC-CCCHHH----HHHHHTT
T ss_pred CCCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhhh----hcCCeEEE---eCCCCCHHH----HhhhhcC
Confidence 35899999987 77787777777765 779999999988754332 33443332 333333222 3333322
Q ss_pred C-CccEEEeCCCC
Q 024752 90 G-KLNILINNAGT 101 (263)
Q Consensus 90 ~-~id~li~~ag~ 101 (263)
+ .+|.++.+++.
T Consensus 230 g~g~d~~~~~~~~ 242 (348)
T 4eez_A 230 GLGVQSAIVCAVA 242 (348)
T ss_dssp SSCEEEEEECCSC
T ss_pred CCCceEEEEeccC
Confidence 3 58999988873
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=96.29 E-value=0.0089 Score=49.78 Aligned_cols=74 Identities=22% Similarity=0.318 Sum_probs=53.3
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
..++++|+++|.|+ |.||+++++.|...|++|++.+|+.++.+... +.+.. .+ +. +++.+++
T Consensus 152 ~~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~----~~g~~--~~--~~---~~l~~~l------ 213 (300)
T 2rir_A 152 DYTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARIT----EMGLV--PF--HT---DELKEHV------ 213 (300)
T ss_dssp SSCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTTCE--EE--EG---GGHHHHS------
T ss_pred CCCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----HCCCe--EE--ch---hhHHHHh------
Confidence 46799999999996 89999999999999999999999987654432 22222 21 11 1222222
Q ss_pred cCCCccEEEeCCCC
Q 024752 88 FDGKLNILINNAGT 101 (263)
Q Consensus 88 ~~~~id~li~~ag~ 101 (263)
...|+++++...
T Consensus 214 --~~aDvVi~~~p~ 225 (300)
T 2rir_A 214 --KDIDICINTIPS 225 (300)
T ss_dssp --TTCSEEEECCSS
T ss_pred --hCCCEEEECCCh
Confidence 467999999884
|
| >4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} | Back alignment and structure |
|---|
Probab=96.29 E-value=0.0045 Score=51.29 Aligned_cols=43 Identities=21% Similarity=0.204 Sum_probs=38.2
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCch
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET 48 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~ 48 (263)
+...+++||.++|.|.++-+|+.++..|...|++|.++.|...
T Consensus 158 ~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~ 200 (300)
T 4a26_A 158 RCGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS 200 (300)
T ss_dssp HHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC
T ss_pred HcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 3457899999999999999999999999999999999987543
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* | Back alignment and structure |
|---|
Probab=96.28 E-value=0.0038 Score=52.63 Aligned_cols=74 Identities=20% Similarity=0.179 Sum_probs=49.8
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCccE
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNI 94 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 94 (263)
+|+|+|++|++|..+++.+...|++|+++++++++++.. +++ +....+ |..+.+ . +.+.+..++.+|+
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~-~~l---Ga~~v~---~~~~~~--~---~~~~~~~~~~~d~ 220 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL-KQL---GASEVI---SREDVY--D---GTLKALSKQQWQG 220 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH-HHH---TCSEEE---EHHHHC--S---SCCCSSCCCCEEE
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc---CCcEEE---ECCCch--H---HHHHHhhcCCccE
Confidence 799999999999999999999999999999998776544 333 332221 211110 0 1111112246999
Q ss_pred EEeCCC
Q 024752 95 LINNAG 100 (263)
Q Consensus 95 li~~ag 100 (263)
+|.++|
T Consensus 221 vid~~g 226 (330)
T 1tt7_A 221 AVDPVG 226 (330)
T ss_dssp EEESCC
T ss_pred EEECCc
Confidence 999998
|
| >2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=96.27 E-value=0.053 Score=45.17 Aligned_cols=114 Identities=14% Similarity=0.088 Sum_probs=64.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchhHHHHHHHHHhcC---CceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKG---LQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
+++.|.|+ |.+|..++..|+..|. .|+++++++++++....++.... ...... . .+.+ .+
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~-~--~~~~-----------a~ 65 (304)
T 2v6b_A 1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVW-H--GGHS-----------EL 65 (304)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEE-E--ECGG-----------GG
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEE-E--CCHH-----------Hh
Confidence 36889998 9999999999999998 89999999887765555443221 111111 1 1111 12
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccc
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVA 152 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~ 152 (263)
..-|++|.+++..... .+.-.+.+..|+--...+++.+.++ ...+.+++++-..
T Consensus 66 -~~aDvVIi~~~~~~~~------g~~r~dl~~~n~~i~~~i~~~i~~~---~p~~~vi~~tNP~ 119 (304)
T 2v6b_A 66 -ADAQVVILTAGANQKP------GESRLDLLEKNADIFRELVPQITRA---APDAVLLVTSNPV 119 (304)
T ss_dssp -TTCSEEEECC------------------CHHHHHHHHHHHHHHHHHH---CSSSEEEECSSSH
T ss_pred -CCCCEEEEcCCCCCCC------CCcHHHHHHhHHHHHHHHHHHHHHh---CCCeEEEEecCch
Confidence 4679999999864321 1112234555555444455554443 2355666655443
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=96.26 E-value=0.02 Score=48.09 Aligned_cols=88 Identities=11% Similarity=0.093 Sum_probs=56.9
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHH-------HHhcCCceEEEeccCCCHHHHHHHHH-
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE-------WKSKGLQVSGSVCDLKIRAQREKLME- 82 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~D~~~~~~~~~~~~- 82 (263)
.+.+++.|.|+ |.+|..+++.|++.|++|++.+|++++.+++.+. ..+.-..+..+..-+.++..++.++.
T Consensus 29 ~~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~ 107 (320)
T 4dll_A 29 PYARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFA 107 (320)
T ss_dssp CCCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTT
T ss_pred cCCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcc
Confidence 34567888865 8899999999999999999999999887765432 11100112333444555667777765
Q ss_pred -HHHhhcCCCccEEEeCCC
Q 024752 83 -TVSSQFDGKLNILINNAG 100 (263)
Q Consensus 83 -~~~~~~~~~id~li~~ag 100 (263)
.+.... .+-.++|+...
T Consensus 108 ~~~~~~l-~~~~~vi~~st 125 (320)
T 4dll_A 108 QGVAAAM-KPGSLFLDMAS 125 (320)
T ss_dssp TCHHHHC-CTTCEEEECSC
T ss_pred hhHHhhC-CCCCEEEecCC
Confidence 454443 33456666654
|
| >3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A | Back alignment and structure |
|---|
Probab=96.25 E-value=0.0091 Score=48.82 Aligned_cols=37 Identities=14% Similarity=0.145 Sum_probs=34.7
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE 47 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~ 47 (263)
++||.++|.|.++-+|+.+++.|..+|++|.++.+..
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t 184 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT 184 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc
Confidence 8999999999999999999999999999999987754
|
| >1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.25 E-value=0.08 Score=44.41 Aligned_cols=114 Identities=9% Similarity=0.051 Sum_probs=70.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchhHHHHHHHHHhcC---CceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKG---LQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
.+|.|+|+ |.+|.+++..|+..+. .++++++++++++....++.... .++... .| +. +.+
T Consensus 6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~-~~--~~-----------~a~ 70 (318)
T 1ez4_A 6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY-SG--EY-----------SDC 70 (318)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEE-EC--CG-----------GGG
T ss_pred CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEE-EC--CH-----------HHh
Confidence 58999998 9999999999998886 79999999988887777765431 222222 22 11 112
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-CCceEEEEccccc
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-GNGNIIFISSVAG 153 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~ 153 (263)
..-|++|..+|..... -+.-.+.+..|.- +++.+.+.+.+. ..+.++++|-...
T Consensus 71 -~~aDvVii~ag~~~~~------g~~R~dl~~~n~~----i~~~i~~~i~~~~p~a~iiv~tNPv~ 125 (318)
T 1ez4_A 71 -KDADLVVITAGAPQKP------GESRLDLVNKNLN----ILSSIVKPVVDSGFDGIFLVAANPVD 125 (318)
T ss_dssp -TTCSEEEECCCC----------------CHHHHHH----HHHHHHHHHHHTTCCSEEEECSSSHH
T ss_pred -CCCCEEEECCCCCCCC------CCCHHHHHHHHHH----HHHHHHHHHHHhCCCeEEEEeCCcHH
Confidence 4689999999974321 1112234455554 444444444443 4678888765554
|
| >3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A | Back alignment and structure |
|---|
Probab=96.25 E-value=0.01 Score=50.62 Aligned_cols=81 Identities=19% Similarity=0.208 Sum_probs=57.6
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCc-------------------hhHHHHHHHHHhc--CCceEEE
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNE-------------------TELNQRIQEWKSK--GLQVSGS 67 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~-------------------~~~~~~~~~~~~~--~~~~~~~ 67 (263)
.+++++|+|.|+ ||+|.++++.|+..|. ++.+++++. .+.+...+.+.+. ..++..+
T Consensus 115 ~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~ 193 (353)
T 3h5n_A 115 KLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEI 193 (353)
T ss_dssp HHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEe
Confidence 356889999998 7899999999999998 789998864 3455555666553 3446666
Q ss_pred eccCCCHHHHHHHHHHHHhhcCCCccEEEeCCC
Q 024752 68 VCDLKIRAQREKLMETVSSQFDGKLNILINNAG 100 (263)
Q Consensus 68 ~~D~~~~~~~~~~~~~~~~~~~~~id~li~~ag 100 (263)
..+++...++. + + ...|+||.+..
T Consensus 194 ~~~i~~~~~~~-------~-~-~~~DlVvd~~D 217 (353)
T 3h5n_A 194 ALNINDYTDLH-------K-V-PEADIWVVSAD 217 (353)
T ss_dssp ECCCCSGGGGG-------G-S-CCCSEEEECCC
T ss_pred ecccCchhhhh-------H-h-ccCCEEEEecC
Confidence 66676544222 2 3 57899988764
|
| >2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A* | Back alignment and structure |
|---|
Probab=96.23 E-value=0.0081 Score=49.00 Aligned_cols=49 Identities=33% Similarity=0.345 Sum_probs=42.0
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHH
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEW 57 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~ 57 (263)
...++++ +++|.|+ |++|+++++.|.+.|++|.+++|+.++.+++.+++
T Consensus 111 ~~~~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~ 159 (263)
T 2d5c_A 111 GGIPLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEF 159 (263)
T ss_dssp TTCCCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred hCCCCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh
Confidence 3457889 9999997 77999999999999999999999998877776554
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=96.23 E-value=0.067 Score=44.68 Aligned_cols=45 Identities=13% Similarity=-0.027 Sum_probs=38.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHh
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKS 59 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~ 59 (263)
++|.|+|+ |.+|..++..|+..|. +|+++++++++++....++..
T Consensus 3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~ 48 (309)
T 1ur5_A 3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYE 48 (309)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHT
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHH
Confidence 57899998 9999999999999997 899999999888765555543
|
| >1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2 | Back alignment and structure |
|---|
Probab=96.23 E-value=0.0055 Score=50.42 Aligned_cols=44 Identities=20% Similarity=0.249 Sum_probs=38.8
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchh
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE 49 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~ 49 (263)
+...+++||.++|.|++.-+|+.+++.|+..|++|.++.+....
T Consensus 152 ~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~ 195 (288)
T 1b0a_A 152 RYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKN 195 (288)
T ss_dssp HTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSC
T ss_pred HcCCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchh
Confidence 45568999999999999999999999999999999998776543
|
| >4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A | Back alignment and structure |
|---|
Probab=96.17 E-value=0.026 Score=51.31 Aligned_cols=89 Identities=13% Similarity=0.194 Sum_probs=56.8
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCc-------------------hhHHHHHHHHHhcC--CceEEEe
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNE-------------------TELNQRIQEWKSKG--LQVSGSV 68 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~-------------------~~~~~~~~~~~~~~--~~~~~~~ 68 (263)
+++++|+|.|+ ||+|.++++.|+..|. ++.++|.+. .+.+..++.+.+.. .++..+.
T Consensus 324 L~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~~ 402 (615)
T 4gsl_A 324 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVK 402 (615)
T ss_dssp HHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEEC
T ss_pred HhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEee
Confidence 67889999987 6899999999999998 799999865 45566666666543 3444444
Q ss_pred ccC-------CCHHHHHHHHHHHHhhcCCCccEEEeCCCC
Q 024752 69 CDL-------KIRAQREKLMETVSSQFDGKLNILINNAGT 101 (263)
Q Consensus 69 ~D~-------~~~~~~~~~~~~~~~~~~~~id~li~~ag~ 101 (263)
.++ ++++....-.+.+.+.+ ...|+||.+..-
T Consensus 403 ~~Ipm~gh~v~~e~~~~l~~~~l~~ll-~~~DlVvd~tDn 441 (615)
T 4gsl_A 403 LSIPMIGHKLVNEEAQHKDFDRLRALI-KEHDIIFLLVDS 441 (615)
T ss_dssp CCCCCTTCCCSCHHHHHHHHHHHHHHH-HHCSEEEECCSS
T ss_pred ccccccCccccchhhhcCCHHHHHHHh-hcCCEEEecCCC
Confidence 433 22211111111122222 357999988763
|
| >1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A* | Back alignment and structure |
|---|
Probab=96.16 E-value=0.0051 Score=50.94 Aligned_cols=43 Identities=28% Similarity=0.346 Sum_probs=38.1
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCch
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET 48 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~ 48 (263)
+...+++||.++|.|++.-+|+.+++.|...|++|.++.+...
T Consensus 158 ~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~ 200 (301)
T 1a4i_A 158 ETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTA 200 (301)
T ss_dssp TTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS
T ss_pred HcCCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcc
Confidence 4567899999999999999999999999999999999876543
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=96.16 E-value=0.023 Score=46.83 Aligned_cols=41 Identities=7% Similarity=0.059 Sum_probs=37.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHH
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRI 54 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~ 54 (263)
+++.|.|++|.+|.++++.|++.|++|++++|+++..+...
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~ 52 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQ 52 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence 57999999999999999999999999999999988776654
|
| >3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=96.14 E-value=0.026 Score=45.82 Aligned_cols=89 Identities=12% Similarity=0.153 Sum_probs=57.3
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEeeCCchhHHHHHHHHH--------hcCCceEEEeccCCCHHHHHHHH
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAI-VHTCSRNETELNQRIQEWK--------SKGLQVSGSVCDLKIRAQREKLM 81 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~-V~~~~r~~~~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~~~~~~ 81 (263)
++++++.|.|+ |.+|..+++.|++.|++ |.+++|+++..++..+++. +.-..+..+.. ...+..+.+++
T Consensus 8 ~~~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~-av~~~~~~~v~ 85 (266)
T 3d1l_A 8 IEDTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIV-SLKDSAFAELL 85 (266)
T ss_dssp GGGCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEE-CCCHHHHHHHH
T ss_pred CCCCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEE-ecCHHHHHHHH
Confidence 33457888887 99999999999999998 8999999988877665421 00011122111 22344567777
Q ss_pred HHHHhhcCCCccEEEeCCCCC
Q 024752 82 ETVSSQFDGKLNILINNAGTF 102 (263)
Q Consensus 82 ~~~~~~~~~~id~li~~ag~~ 102 (263)
+++.... .+=.+++++.+..
T Consensus 86 ~~l~~~~-~~~~ivv~~s~~~ 105 (266)
T 3d1l_A 86 QGIVEGK-REEALMVHTAGSI 105 (266)
T ss_dssp HHHHTTC-CTTCEEEECCTTS
T ss_pred HHHHhhc-CCCcEEEECCCCC
Confidence 7776543 2234667776543
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=96.11 E-value=0.012 Score=48.72 Aligned_cols=44 Identities=27% Similarity=0.444 Sum_probs=38.7
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHH
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQ 52 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~ 52 (263)
..+++||+++|.|+ |.||+++++.+...|++|++++|+.++.+.
T Consensus 150 ~~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~ 193 (293)
T 3d4o_A 150 DFTIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLAR 193 (293)
T ss_dssp SSCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred CCCCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence 35789999999995 899999999999999999999999876543
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=96.10 E-value=0.02 Score=47.25 Aligned_cols=85 Identities=14% Similarity=0.014 Sum_probs=55.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHH-------HHhcCCceEEEeccCCCHHHHHHHH---HH
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE-------WKSKGLQVSGSVCDLKIRAQREKLM---ET 83 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~D~~~~~~~~~~~---~~ 83 (263)
+++.|.|+ |.+|..+++.|++.|++|++.+|++++.+++.+. ..+.-..+..+..-+.++..++.++ +.
T Consensus 2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~ 80 (287)
T 3pef_A 2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHG 80 (287)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcch
Confidence 46778875 8999999999999999999999999887765431 1100001233344455566777777 66
Q ss_pred HHhhcCCCccEEEeCCC
Q 024752 84 VSSQFDGKLNILINNAG 100 (263)
Q Consensus 84 ~~~~~~~~id~li~~ag 100 (263)
+.... .+=.++|+...
T Consensus 81 l~~~l-~~~~~vi~~st 96 (287)
T 3pef_A 81 VLEGI-GEGRGYVDMST 96 (287)
T ss_dssp HHHHC-CTTCEEEECSC
T ss_pred HhhcC-CCCCEEEeCCC
Confidence 65544 23346666644
|
| >2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A | Back alignment and structure |
|---|
Probab=96.07 E-value=0.0097 Score=48.79 Aligned_cols=42 Identities=21% Similarity=0.244 Sum_probs=37.2
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHC--CCeEEEeeCCc
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAF--GAIVHTCSRNE 47 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~--g~~V~~~~r~~ 47 (263)
+...+++||+++|.|++.-+|+.+++.|.+. |++|.++.|..
T Consensus 151 ~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t 194 (281)
T 2c2x_A 151 RYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT 194 (281)
T ss_dssp HTTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC
T ss_pred HcCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch
Confidence 3456899999999999999999999999999 89999987665
|
| >1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A* | Back alignment and structure |
|---|
Probab=96.04 E-value=0.016 Score=48.11 Aligned_cols=46 Identities=22% Similarity=0.179 Sum_probs=37.2
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHH
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRI 54 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~ 54 (263)
.|..+-++|.|.|+ |.+|..+|..|++.|++|++++|+++.++...
T Consensus 10 ~~~~~~~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~ 55 (302)
T 1f0y_A 10 AKKIIVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSK 55 (302)
T ss_dssp --CCCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred cccccCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHH
Confidence 33333467889988 89999999999999999999999998877643
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=95.97 E-value=0.074 Score=42.87 Aligned_cols=77 Identities=14% Similarity=0.126 Sum_probs=55.7
Q ss_pred EEEEecCCCchHHHHHHHHHHC-CCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 15 TALVTGGTKGIGYAVVEELAAF-GAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
+|.|.|++|.+|+.+++.+.+. ++.++......+.+++... .... +..|+|.++.....+..+.+. .++
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~----~~~D---vvIDfT~p~a~~~~~~~a~~~---g~~ 71 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD----GNTE---VVIDFTHPDVVMGNLEFLIDN---GIH 71 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH----TTCC---EEEECSCTTTHHHHHHHHHHT---TCE
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc----cCCc---EEEEccChHHHHHHHHHHHHc---CCC
Confidence 5899999999999999998866 8887655443333333322 1222 457999999998888877664 578
Q ss_pred EEEeCCCC
Q 024752 94 ILINNAGT 101 (263)
Q Consensus 94 ~li~~ag~ 101 (263)
+|+...|.
T Consensus 72 ~VigTTG~ 79 (245)
T 1p9l_A 72 AVVGTTGF 79 (245)
T ss_dssp EEECCCCC
T ss_pred EEEcCCCC
Confidence 88888874
|
| >1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* | Back alignment and structure |
|---|
Probab=95.95 E-value=0.18 Score=42.01 Aligned_cols=114 Identities=15% Similarity=0.034 Sum_probs=69.8
Q ss_pred EEEEecCCCchHHHHHHHHHHC--CCeEEEeeCCchhHHHHHHHHHhc----CCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 15 TALVTGGTKGIGYAVVEELAAF--GAIVHTCSRNETELNQRIQEWKSK----GLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
++.|.|+ |.+|..++..|++. |.+|++++++++.++....++... ......... ++.+ . +
T Consensus 2 kI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d~~---~--------l 67 (310)
T 1guz_A 2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYA---D--------T 67 (310)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGG---G--------G
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEEC--CCHH---H--------H
Confidence 5788998 99999999999985 789999999998877654444321 111111110 1211 1 2
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccc
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVA 152 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~ 152 (263)
...|++|.+++.... + ..+ ....+..|.--...+.+.+.++ ...+.+++++-..
T Consensus 68 -~~aDvViiav~~p~~-~--g~~---r~dl~~~n~~i~~~i~~~i~~~---~~~~~viv~tNP~ 121 (310)
T 1guz_A 68 -ANSDIVIITAGLPRK-P--GMT---REDLLMKNAGIVKEVTDNIMKH---SKNPIIIVVSNPL 121 (310)
T ss_dssp -TTCSEEEECCSCCCC-T--TCC---HHHHHHHHHHHHHHHHHHHHHH---CSSCEEEECCSSH
T ss_pred -CCCCEEEEeCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEEcCch
Confidence 467999999985321 1 112 2345666665555566655444 2356777776544
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=95.93 E-value=0.011 Score=49.98 Aligned_cols=72 Identities=10% Similarity=-0.027 Sum_probs=55.9
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
.+.++|.|+ |.+|+.+++.|.++|. |++++++++..+ .. + ..+.++..|.++++.++++- -.+.
T Consensus 115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~-~-----~~~~~i~gd~~~~~~L~~a~-------i~~a 178 (336)
T 1lnq_A 115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VL-R-----SGANFVHGDPTRVSDLEKAN-------VRGA 178 (336)
T ss_dssp -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HH-H-----TTCEEEESCTTSHHHHHHTC-------STTE
T ss_pred cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HH-h-----CCcEEEEeCCCCHHHHHhcC-------hhhc
Confidence 457999996 8899999999999999 999999998776 32 2 23677889999988877641 1467
Q ss_pred cEEEeCCC
Q 024752 93 NILINNAG 100 (263)
Q Consensus 93 d~li~~ag 100 (263)
|.++...+
T Consensus 179 ~~vi~~~~ 186 (336)
T 1lnq_A 179 RAVIVDLE 186 (336)
T ss_dssp EEEEECCS
T ss_pred cEEEEcCC
Confidence 88887654
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=95.92 E-value=0.023 Score=48.63 Aligned_cols=46 Identities=15% Similarity=0.102 Sum_probs=36.3
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHH
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRI 54 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~ 54 (263)
+..++.+++.|.| .|-+|..+++.|++.|++|.+.+|++++.+++.
T Consensus 17 ~~Mm~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~ 62 (358)
T 4e21_A 17 NLYFQSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALE 62 (358)
T ss_dssp -----CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred hhhhcCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH
Confidence 3446678888887 689999999999999999999999998776653
|
| >3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus} | Back alignment and structure |
|---|
Probab=95.82 E-value=0.21 Score=38.67 Aligned_cols=75 Identities=15% Similarity=0.168 Sum_probs=54.2
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCC--ceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL--QVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
++++||-.|++.|. ++..+++.+.+|+.++.+++.++...+.+...+. ++.++..|+.+. + ...
T Consensus 55 ~~~~vLDlGcG~G~---~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~------~----~~~- 120 (204)
T 3njr_A 55 RGELLWDIGGGSGS---VSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAA------L----ADL- 120 (204)
T ss_dssp TTCEEEEETCTTCH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGG------G----TTS-
T ss_pred CCCEEEEecCCCCH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhh------c----ccC-
Confidence 46789999988763 4445555688999999999988877777665543 588999998641 0 111
Q ss_pred CCccEEEeCCC
Q 024752 90 GKLNILINNAG 100 (263)
Q Consensus 90 ~~id~li~~ag 100 (263)
+.+|+++.+.+
T Consensus 121 ~~~D~v~~~~~ 131 (204)
T 3njr_A 121 PLPEAVFIGGG 131 (204)
T ss_dssp CCCSEEEECSC
T ss_pred CCCCEEEECCc
Confidence 46899997764
|
| >2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=95.81 E-value=0.053 Score=42.48 Aligned_cols=77 Identities=13% Similarity=0.152 Sum_probs=50.7
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
.+++.+++.|.| .|.+|.+++..|++.|++|++.+|+++ .....++.++.+ . ...+.++++++....
T Consensus 15 ~~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~---------~~~~aD~vi~av--~-~~~~~~v~~~l~~~~ 81 (209)
T 2raf_A 15 LYFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ---------ATTLGEIVIMAV--P-YPALAALAKQYATQL 81 (209)
T ss_dssp -----CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC---------CSSCCSEEEECS--C-HHHHHHHHHHTHHHH
T ss_pred cccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH---------HhccCCEEEEcC--C-cHHHHHHHHHHHHhc
Confidence 446778899999 799999999999999999999999876 111233444333 3 667778887776554
Q ss_pred CCCccEEEeCCC
Q 024752 89 DGKLNILINNAG 100 (263)
Q Consensus 89 ~~~id~li~~ag 100 (263)
. =.++++.+.
T Consensus 82 -~-~~~vi~~~~ 91 (209)
T 2raf_A 82 -K-GKIVVDITN 91 (209)
T ss_dssp -T-TSEEEECCC
T ss_pred -C-CCEEEEECC
Confidence 2 234555543
|
| >7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A* | Back alignment and structure |
|---|
Probab=95.80 E-value=0.25 Score=42.25 Aligned_cols=118 Identities=10% Similarity=0.035 Sum_probs=70.0
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCC-----eEEEeeCCc----hhHHHHHHHHHhcCCc-eEEEeccCCCHHHHHHHHH
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGA-----IVHTCSRNE----TELNQRIQEWKSKGLQ-VSGSVCDLKIRAQREKLME 82 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~-----~V~~~~r~~----~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~ 82 (263)
..+|.|+||+|.+|.+++..++..+. .+++.+.+. +.++-...++...... ...+ .++. +. .
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v--~i~~-~~-y---- 103 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREV--SIGI-DP-Y---- 103 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEE--EEES-CH-H----
T ss_pred CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCc--EEec-CC-H----
Confidence 46799999999999999999998864 266655433 3355555566543211 1111 1121 01 1
Q ss_pred HHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhh--CCCceEEEEcccc
Q 024752 83 TVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKS--AGNGNIIFISSVA 152 (263)
Q Consensus 83 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~iv~vsS~~ 152 (263)
+.+ ..-|++|..||... ++ .++ -.+.++.|. .+++...+.+.+ ...+.++.+|-..
T Consensus 104 ---~~~-~daDvVVitag~pr-kp--G~t---R~DLl~~N~----~I~k~i~~~i~~~a~p~~ivlVvsNPv 161 (375)
T 7mdh_A 104 ---EVF-EDVDWALLIGAKPR-GP--GME---RAALLDING----QIFADQGKALNAVASKNVKVLVVGNPC 161 (375)
T ss_dssp ---HHT-TTCSEEEECCCCCC-CT--TCC---HHHHHHHHH----HHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred ---HHh-CCCCEEEEcCCCCC-CC--CCC---HHHHHHHHH----HHHHHHHHHHHHhcCCCeEEEEecCch
Confidence 112 46899999998642 21 123 345667776 445555555555 3467888887654
|
| >2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A | Back alignment and structure |
|---|
Probab=95.79 E-value=0.2 Score=41.82 Aligned_cols=115 Identities=12% Similarity=0.043 Sum_probs=72.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC--CeEEEeeCCchhHHHHHHHHHhc---CCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFG--AIVHTCSRNETELNQRIQEWKSK---GLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
+++.|+|+ |.+|.+++..|+..+ ..++++++++++++....++... ..++... .+ +.++ +
T Consensus 1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~-~~--~~~a-----------~ 65 (310)
T 2xxj_A 1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVW-AG--SYGD-----------L 65 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEE-EC--CGGG-----------G
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEE-EC--CHHH-----------h
Confidence 36889998 999999999999887 47999999998888767776542 1122222 12 2111 2
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccc
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAG 153 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 153 (263)
..-|++|..+|..... ..+.. ..+..|.--...+.+.+.++ ...+.++++|-...
T Consensus 66 -~~aD~Vii~ag~~~~~---g~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNPv~ 120 (310)
T 2xxj_A 66 -EGARAVVLAAGVAQRP---GETRL---QLLDRNAQVFAQVVPRVLEA---APEAVLLVATNPVD 120 (310)
T ss_dssp -TTEEEEEECCCCCCCT---TCCHH---HHHHHHHHHHHHHHHHHHHH---CTTCEEEECSSSHH
T ss_pred -CCCCEEEECCCCCCCC---CcCHH---HHHHhhHHHHHHHHHHHHHH---CCCcEEEEecCchH
Confidence 4689999999975322 22333 34555554444444444332 34678888766554
|
| >3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=95.78 E-value=0.19 Score=42.81 Aligned_cols=48 Identities=17% Similarity=0.088 Sum_probs=37.6
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHH
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQ 55 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~ 55 (263)
++|+.+.+++.|.|+ |.+|.+++..|++.|++|.+.+|+++..+.+.+
T Consensus 23 ~~m~~~~mkI~VIGa-G~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~ 70 (356)
T 3k96_A 23 NAMEPFKHPIAILGA-GSWGTALALVLARKGQKVRLWSYESDHVDEMQA 70 (356)
T ss_dssp ----CCCSCEEEECC-SHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHH
T ss_pred hcccccCCeEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence 344555567888886 899999999999999999999999887766554
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=95.76 E-value=0.0065 Score=57.56 Aligned_cols=77 Identities=14% Similarity=0.239 Sum_probs=50.3
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC-
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG- 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~- 90 (263)
+|++|||.||+|++|...++.....|++|+.+++++ +.+.+ + .+.... .|-.+.+ +.+++.+..++
T Consensus 345 ~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~~l-~----lga~~v---~~~~~~~----~~~~i~~~t~g~ 411 (795)
T 3slk_A 345 PGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED-KWQAV-E----LSREHL---ASSRTCD----FEQQFLGATGGR 411 (795)
T ss_dssp TTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG-GGGGS-C----SCGGGE---ECSSSST----HHHHHHHHSCSS
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hhhhh-h----cChhhe---eecCChh----HHHHHHHHcCCC
Confidence 589999999999999999999889999999998765 32211 1 222211 1323222 22333443323
Q ss_pred CccEEEeCCCC
Q 024752 91 KLNILINNAGT 101 (263)
Q Consensus 91 ~id~li~~ag~ 101 (263)
.+|+++++.|.
T Consensus 412 GvDvVld~~gg 422 (795)
T 3slk_A 412 GVDVVLNSLAG 422 (795)
T ss_dssp CCSEEEECCCT
T ss_pred CeEEEEECCCc
Confidence 69999998764
|
| >2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A* | Back alignment and structure |
|---|
Probab=95.74 E-value=0.056 Score=43.72 Aligned_cols=78 Identities=15% Similarity=0.144 Sum_probs=57.2
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHh------------------cCCceEEEeccCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS------------------KGLQVSGSVCDLKI 73 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~------------------~~~~~~~~~~D~~~ 73 (263)
++.+||..|++.|. .+..|+++|++|+.++.++..++...+.... .+.++.++.+|+.+
T Consensus 68 ~~~~vLD~GCG~G~---~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~ 144 (252)
T 2gb4_A 68 SGLRVFFPLCGKAI---EMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD 144 (252)
T ss_dssp CSCEEEETTCTTCT---HHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred CCCeEEEeCCCCcH---HHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence 67899999998874 3567888999999999999988776554321 13568899999986
Q ss_pred HHHHHHHHHHHHhhcCCCccEEEeCCCCC
Q 024752 74 RAQREKLMETVSSQFDGKLNILINNAGTF 102 (263)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~id~li~~ag~~ 102 (263)
... .. .+.+|+++.++...
T Consensus 145 l~~---------~~-~~~FD~V~~~~~l~ 163 (252)
T 2gb4_A 145 LPR---------AN-IGKFDRIWDRGALV 163 (252)
T ss_dssp GGG---------GC-CCCEEEEEESSSTT
T ss_pred CCc---------cc-CCCEEEEEEhhhhh
Confidence 421 00 15799999876543
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=95.71 E-value=0.015 Score=61.69 Aligned_cols=82 Identities=13% Similarity=0.181 Sum_probs=54.4
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC-C
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD-G 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~ 90 (263)
+|++|||.||+|++|...++.....|++|+++++++++.+.+.+.....+.... .|-.+. .+.+++.+..+ .
T Consensus 1667 ~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~~v---~~~~~~----~~~~~i~~~t~g~ 1739 (2512)
T 2vz8_A 1667 PGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCF---ANSRDT----SFEQHVLRHTAGK 1739 (2512)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCSTTE---EESSSS----HHHHHHHHTTTSC
T ss_pred CCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCceEE---ecCCCH----HHHHHHHHhcCCC
Confidence 589999999999999999998888999999999988776655432211222211 122332 22333444332 3
Q ss_pred CccEEEeCCC
Q 024752 91 KLNILINNAG 100 (263)
Q Consensus 91 ~id~li~~ag 100 (263)
.+|+++++.+
T Consensus 1740 GvDvVld~~g 1749 (2512)
T 2vz8_A 1740 GVDLVLNSLA 1749 (2512)
T ss_dssp CEEEEEECCC
T ss_pred CceEEEECCC
Confidence 5899998765
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 263 | ||||
| d1xq1a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara | 6e-86 | |
| d2ae2a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 3e-85 | |
| d1ae1a_ | 258 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 3e-78 | |
| d2d1ya1 | 248 | c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T | 8e-76 | |
| d2ew8a1 | 247 | c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas | 2e-73 | |
| d1spxa_ | 264 | c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato | 8e-72 | |
| d1zk4a1 | 251 | c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase | 1e-68 | |
| d1hxha_ | 253 | c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge | 3e-68 | |
| d1xkqa_ | 272 | c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh | 3e-67 | |
| d1ydea1 | 250 | c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase | 6e-67 | |
| d1hdca_ | 254 | c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr | 1e-66 | |
| d1vl8a_ | 251 | c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga | 3e-66 | |
| d1cyda_ | 242 | c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul | 4e-66 | |
| d2c07a1 | 251 | c.2.1.2 (A:54-304) beta-keto acyl carrier protein | 1e-64 | |
| d1pr9a_ | 244 | c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie | 3e-64 | |
| d1xg5a_ | 257 | c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41 | 9e-64 | |
| d1xhla_ | 274 | c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh | 1e-63 | |
| d1ulsa_ | 242 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 2e-63 | |
| d1h5qa_ | 260 | c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga | 3e-63 | |
| d2ag5a1 | 245 | c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami | 2e-62 | |
| d2bgka1 | 268 | c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de | 3e-62 | |
| d1yxma1 | 297 | c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re | 4e-62 | |
| d1bdba_ | 276 | c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy | 1e-61 | |
| d1fmca_ | 255 | c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase | 2e-61 | |
| d1gz6a_ | 302 | c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do | 6e-61 | |
| d2rhca1 | 257 | c.2.1.2 (A:5-261) beta-keto acyl carrier protein r | 3e-60 | |
| d1g0oa_ | 272 | c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase | 4e-60 | |
| d1nffa_ | 244 | c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob | 7e-60 | |
| d2gdza1 | 254 | c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog | 2e-59 | |
| d1zema1 | 260 | c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba | 4e-59 | |
| d1zmta1 | 252 | c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag | 1e-58 | |
| d1geea_ | 261 | c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat | 1e-58 | |
| d1iy8a_ | 258 | c.2.1.2 (A:) Levodione reductase {Corynebacterium | 2e-58 | |
| d2a4ka1 | 241 | c.2.1.2 (A:2-242) beta-keto acyl carrier protein r | 3e-58 | |
| d1o5ia_ | 234 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 1e-57 | |
| d1ja9a_ | 259 | c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc | 1e-57 | |
| d1w6ua_ | 294 | c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr | 3e-57 | |
| d1sbya1 | 254 | c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase | 6e-57 | |
| d1x1ta1 | 260 | c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge | 7e-57 | |
| d1edoa_ | 244 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 1e-56 | |
| d1yb1a_ | 244 | c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase | 1e-56 | |
| d1q7ba_ | 243 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 3e-56 | |
| d1uzma1 | 237 | c.2.1.2 (A:9-245) beta-keto acyl carrier protein r | 9e-53 | |
| d1k2wa_ | 256 | c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s | 1e-52 | |
| d1gega_ | 255 | c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl | 2e-52 | |
| d1ulua_ | 256 | c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph | 9e-52 | |
| d2bd0a1 | 240 | c.2.1.2 (A:2-241) Bacterial sepiapterin reductase | 6e-51 | |
| d1oaaa_ | 259 | c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus | 2e-48 | |
| d1uaya_ | 241 | c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena | 1e-47 | |
| d1qsga_ | 258 | c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli | 5e-47 | |
| d1mxha_ | 266 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 2e-46 | |
| d2o23a1 | 248 | c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr | 6e-44 | |
| d1xu9a_ | 269 | c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase | 1e-42 | |
| d1wmaa1 | 275 | c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox | 2e-41 | |
| d1fjha_ | 257 | c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase | 4e-41 | |
| d1jtva_ | 285 | c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi | 1e-40 | |
| d1dhra_ | 236 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 9e-39 | |
| d1e7wa_ | 284 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 9e-36 | |
| d2pd4a1 | 274 | c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte | 1e-35 | |
| d1yo6a1 | 250 | c.2.1.2 (A:1-250) Putative carbonyl reductase snif | 6e-35 | |
| d1ooea_ | 235 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 2e-34 | |
| d1snya_ | 248 | c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly | 9e-30 | |
| d2h7ma1 | 268 | c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri | 1e-29 | |
| d1d7oa_ | 297 | c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B | 2e-28 | |
| d1uh5a_ | 329 | c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite | 4e-21 | |
| d1luaa1 | 191 | c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter | 3e-17 | |
| d1jaya_ | 212 | c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase | 1e-15 | |
| d2fr1a1 | 259 | c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI | 7e-15 | |
| d2c5aa1 | 363 | c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T | 3e-05 | |
| d1y1pa1 | 342 | c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo | 8e-05 | |
| d1rkxa_ | 356 | c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia | 9e-05 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 1e-04 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 2e-04 | |
| d1qyda_ | 312 | c.2.1.2 (A:) Pinoresinol-lariciresinol reductase { | 5e-04 | |
| d1hdoa_ | 205 | c.2.1.2 (A:) Biliverdin IX beta reductase {Human ( | 7e-04 | |
| d1qyca_ | 307 | c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta | 8e-04 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 0.001 | |
| d1rpna_ | 321 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo | 0.001 | |
| d1xgka_ | 350 | c.2.1.2 (A:) Negative transcriptional regulator Nm | 0.002 | |
| d2bkaa1 | 232 | c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H | 0.003 | |
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 0.003 | |
| d1udca_ | 338 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 0.004 |
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 254 bits (651), Expect = 6e-86
Identities = 159/257 (61%), Positives = 197/257 (76%), Gaps = 4/257 (1%)
Query: 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSG 66
QRWSLK T LVTGGTKGIG+A+VEE A FGA++HTC+RNE ELN+ + +W+ KG QV+G
Sbjct: 2 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTG 61
Query: 67 SVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESA 126
SVCD +R +REKLM+TVSS F GKL+ILINN G K T ++T EDFS ++TN ESA
Sbjct: 62 SVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESA 121
Query: 127 YHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKI 186
YHLSQLAHPLLK++G GNIIF+SS+AGV++ + SIY+++K A+NQL +NLACEWA D I
Sbjct: 122 YHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGI 181
Query: 187 RVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246
R N VAP VI TPL + V D E ++ R P+ R GEP EVSS+VAFLC+ A SY
Sbjct: 182 RANAVAPAVIATPLAEAVYDD----EFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASY 237
Query: 247 VTGQVICVDGGYSVTGF 263
+TGQ ICVDGG +V GF
Sbjct: 238 ITGQTICVDGGLTVNGF 254
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Score = 253 bits (646), Expect = 3e-85
Identities = 142/257 (55%), Positives = 193/257 (75%), Gaps = 1/257 (0%)
Query: 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGS 67
RW+L+G TALVTGG++GIGY +VEELA+ GA V+TCSRN+ ELN + +W+SKG +V S
Sbjct: 3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEAS 62
Query: 68 VCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAY 127
VCDL R++R++LM TV++ F GKLNIL+NNAG I KE ++T ED+S +M+ NFE+AY
Sbjct: 63 VCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAY 122
Query: 128 HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
HLS LAHP LK++ GN++FISSV+G +A+P ++Y ++K AM+QLT+ LA EWAKD IR
Sbjct: 123 HLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIR 182
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
VN V P VI T L++ +D E+ N+++ R + R GEP E++++VAFLC A SYV
Sbjct: 183 VNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYV 242
Query: 248 TGQVICVDGGYSV-TGF 263
TGQ+I VDGG GF
Sbjct: 243 TGQIIYVDGGLMANCGF 259
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Score = 235 bits (600), Expect = 3e-78
Identities = 155/256 (60%), Positives = 207/256 (80%), Gaps = 1/256 (0%)
Query: 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGS 67
RWSLKG TALVTGG+KGIGYA+VEELA GA V+TCSRNE EL++ ++ W+ KGL V GS
Sbjct: 1 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGS 60
Query: 68 VCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAY 127
VCDL R +R+KLM+TV+ FDGKLNIL+NNAG I KE +FTE+D++ +M TNFE+AY
Sbjct: 61 VCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAY 120
Query: 128 HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
HLSQ+A+PLLK++ NGN+IF+SS+AG A+P S+Y++SK A+NQ+TK+LACEWAKD IR
Sbjct: 121 HLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIR 180
Query: 188 VNTVAPWVIRTPLLDT-VEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246
VN+VAP VI TPL++T ++K+ + E + +++TPM R G+P EVS+++AFLC A SY
Sbjct: 181 VNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASY 240
Query: 247 VTGQVICVDGGYSVTG 262
+TGQ+I DGG++ G
Sbjct: 241 ITGQIIWADGGFTANG 256
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Score = 228 bits (583), Expect = 8e-76
Identities = 76/252 (30%), Positives = 119/252 (47%), Gaps = 8/252 (3%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
G LVTGG +GIG A+ + A GA+V C E + + Q D
Sbjct: 3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRP-EGKEVAEAIGGAFFQ-----VD 56
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
L+ +R + +E + G++++L+NNA P ++ V+ N + HLS
Sbjct: 57 LEDERERVRFVEEAAYAL-GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLS 115
Query: 131 QLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNT 190
LA ++ G G I+ ++SV G+ A + Y +SK + LT++LA + A +IRVN
Sbjct: 116 ALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNA 175
Query: 191 VAPWVIRTPLLDTVEKDSNFLEHANRMVL-RTPMLRPGEPNEVSSVVAFLCLSATSYVTG 249
VAP I T + S E R + R G+P EV+ V FL S++TG
Sbjct: 176 VAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITG 235
Query: 250 QVICVDGGYSVT 261
++ VDGG + +
Sbjct: 236 AILPVDGGMTAS 247
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Score = 222 bits (568), Expect = 2e-73
Identities = 75/252 (29%), Positives = 116/252 (46%), Gaps = 8/252 (3%)
Query: 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSG 66
QR LK A++TGG GIG A+ E A GA + + ++ G +V
Sbjct: 1 QR--LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAE--AAIRNLGRRVLT 56
Query: 67 SVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESA 126
CD+ E + V S F G+ +IL+NNAG + E T E + N +S
Sbjct: 57 VKCDVSQPGDVEAFGKQVISTF-GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSG 115
Query: 127 YHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKI 186
+ +++ P +K G G II ++S + I + Y S+K A T+ LA + KD I
Sbjct: 116 FLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGI 175
Query: 187 RVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246
VN +AP ++RT + + F N + + R P +++ AFL S+
Sbjct: 176 TVNAIAPSLVRTATTEASALSAMFDVLPNML---QAIPRLQVPLDLTGAAAFLASDDASF 232
Query: 247 VTGQVICVDGGY 258
+TGQ + VDGG
Sbjct: 233 ITGQTLAVDGGM 244
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 219 bits (558), Expect = 8e-72
Identities = 77/262 (29%), Positives = 125/262 (47%), Gaps = 13/262 (4%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL---QVSGS 67
A++TG + GIG A A GA V R+ L + Q+ + G+ V+
Sbjct: 3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSV 62
Query: 68 VCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIP----KETTEFTEEDFSTVMTTNF 123
V D+ A +++++ T +F GKL+IL+NNAG IP K T + E + + N
Sbjct: 63 VADVTTDAGQDEILSTTLGKF-GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNL 121
Query: 124 ESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAK 183
S L++ A P L S + S +G+ A P Y+ +K A++Q T+N A + +
Sbjct: 122 RSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQ 181
Query: 184 DKIRVNTVAPWVIRTPLLDTV----EKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFL 239
IRVN+++P ++ T + E F M P G+P +++ V+AFL
Sbjct: 182 HGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFL 241
Query: 240 CLS-ATSYVTGQVICVDGGYSV 260
+SY+ G + VDGG S+
Sbjct: 242 ADRKTSSYIIGHQLVVDGGSSL 263
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Score = 210 bits (536), Expect = 1e-68
Identities = 75/252 (29%), Positives = 123/252 (48%), Gaps = 9/252 (3%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
L G A++TGGT GIG A+ + GA V R+ + + + Q+ D
Sbjct: 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD-QIQFFQHD 62
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
KL + F G ++ L+NNAG + K E T ++ ++ N + + +
Sbjct: 63 SSDEDGWTKLFDATEKAF-GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGT 121
Query: 131 QLAHPLLKSAGNG-NIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWA--KDKIR 187
+L +K+ G G +II +SS+ G + P Y +SK A+ ++K+ A + A +R
Sbjct: 122 RLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVR 181
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
VNTV P I+TPL+D + E A +TPM GEPN+++ + +L + + +
Sbjct: 182 VNTVHPGYIKTPLVDDLPGA----EEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFA 237
Query: 248 TGQVICVDGGYS 259
TG VDGGY+
Sbjct: 238 TGSEFVVDGGYT 249
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 209 bits (534), Expect = 3e-68
Identities = 76/254 (29%), Positives = 114/254 (44%), Gaps = 7/254 (2%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
L+G ALVTGG G+G VV+ L GA V NE Q E + + V D
Sbjct: 4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFV---RHD 60
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
+ A +M V + G LN+L+NNAG +P + EDFS ++ N ES +
Sbjct: 61 VSSEADWTLVMAAVQRRL-GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGC 119
Query: 131 QLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKD--KIRV 188
Q +K G G+II ++SV+ + I + Y++SK A++ LT+ A K IRV
Sbjct: 120 QQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRV 178
Query: 189 NTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248
N++ P I TP++ E R P ++ +V FL +S ++
Sbjct: 179 NSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMS 238
Query: 249 GQVICVDGGYSVTG 262
G + D G
Sbjct: 239 GSELHADNSILGMG 252
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Score = 207 bits (529), Expect = 3e-67
Identities = 69/262 (26%), Positives = 122/262 (46%), Gaps = 13/262 (4%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL---QVSGS 67
T ++TG + GIG A GA V R+ L + Q G+ QV+
Sbjct: 3 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV 62
Query: 68 VCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPK----ETTEFTEEDFSTVMTTNF 123
V D+ +++++ + QF GK+++L+NNAG IP T+ + + + N
Sbjct: 63 VADVTTEDGQDQIINSTLKQF-GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNL 121
Query: 124 ESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAK 183
++ +++ P L ++ + S VAG A P YA +K A++Q T++ A + AK
Sbjct: 122 QAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAK 181
Query: 184 DKIRVNTVAPWVIRTPLLDTV----EKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFL 239
IRVN+V+P ++ T + + + F P+ G+P +++++ FL
Sbjct: 182 FGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFL 241
Query: 240 CLS-ATSYVTGQVICVDGGYSV 260
+ Y+ GQ I DGG S+
Sbjct: 242 ADRNLSFYILGQSIVADGGTSL 263
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Score = 205 bits (524), Expect = 6e-67
Identities = 71/252 (28%), Positives = 119/252 (47%), Gaps = 9/252 (3%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
G +VTGG +GIG +V GA V C ++E+ + + + +CD
Sbjct: 4 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGG----RALEQELPGAVFILCD 59
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTE-FTEEDFSTVMTTNFESAYHL 129
+ + L+ +F +L+ ++NNAG P + E + + F ++ N Y L
Sbjct: 60 VTQEDDVKTLVSETIRRFG-RLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTL 118
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
++LA P L+ GN+I ISS+ G I Y ++K A+ +TK LA + + +RVN
Sbjct: 119 TKLALPYLR-KSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVN 177
Query: 190 TVAPWVIRTPLLDTV-EKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248
++P I TPL + + + +L P+ R G+P EV + FL S ++ T
Sbjct: 178 CISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLA-SEANFCT 236
Query: 249 GQVICVDGGYSV 260
G + V GG +
Sbjct: 237 GIELLVTGGAEL 248
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Score = 205 bits (523), Expect = 1e-66
Identities = 75/251 (29%), Positives = 116/251 (46%), Gaps = 10/251 (3%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
L G T ++TGG +G+G + A GA V + E +E G D
Sbjct: 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLD 59
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
+ I ++++ +F G ++ L+NNAG + E F V+ N +
Sbjct: 60 VTIEEDWQRVVAYAREEF-GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGM 118
Query: 131 QLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNT 190
+ P +K AG G+I+ ISS AG++ + + S Y +SK + L+K A E D+IRVN+
Sbjct: 119 KTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNS 178
Query: 191 VAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPG-EPNEVSSVVAFLCLSATSYVTG 249
V P + TP+ + TPM R G EP E++ V L +SYVTG
Sbjct: 179 VHPGMTYTPMT-----AETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTG 233
Query: 250 QVICVDGGYSV 260
+ VDGG++
Sbjct: 234 AELAVDGGWTT 244
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Score = 204 bits (519), Expect = 3e-66
Identities = 87/253 (34%), Positives = 131/253 (51%), Gaps = 6/253 (2%)
Query: 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGS 67
+ L+G ALVTGG++G+G+ + + LA G V SRN E ++ Q+ K G++
Sbjct: 1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAF 60
Query: 68 VCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAY 127
CD+ + +KL+E V +F GKL+ ++N AG EF ++F V+ N Y
Sbjct: 61 RCDVSNYEEVKKLLEAVKEKF-GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTY 119
Query: 128 HLSQL-AHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKI 186
++ + L +S I S + +P S YA+SK + LTK LA EW + I
Sbjct: 120 YVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGI 179
Query: 187 RVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246
RVN +AP RT + + V D E + M+ R P+ R G P ++ V FL Y
Sbjct: 180 RVNVIAPGWYRTKMTEAVFSDP---EKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKY 236
Query: 247 VTGQVICVDGGYS 259
VTGQ+I VDGG++
Sbjct: 237 VTGQIIFVDGGWT 249
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 203 bits (518), Expect = 4e-66
Identities = 77/250 (30%), Positives = 119/250 (47%), Gaps = 13/250 (5%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
+ G+ ALVTG KGIG V+ L A GA V +R ++L +E +
Sbjct: 2 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG----IEPVCV 57
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
DL EK + + G +++L+NNA I + E T+E F + N S + +
Sbjct: 58 DLGDWDATEKALGGI-----GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQV 112
Query: 130 SQLAHPLL-KSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
SQ+ + G+I+ +SS+ + P Y+S+K AM LTK +A E KIRV
Sbjct: 113 SQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRV 172
Query: 189 NTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248
N+V P V+ T + V D E A ++ R P+ + E +V + + FL ++ +
Sbjct: 173 NSVNPTVVLTDMGKKVSADP---EFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTS 229
Query: 249 GQVICVDGGY 258
G I VD GY
Sbjct: 230 GGGILVDAGY 239
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Score = 200 bits (509), Expect = 1e-64
Identities = 70/251 (27%), Positives = 123/251 (49%), Gaps = 6/251 (2%)
Query: 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSV 68
+ + ALVTG +GIG + + LA + V SR + + + E KS G + SG
Sbjct: 6 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYA 65
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYH 128
D+ + + +++ + ++ ++IL+NNAG +++ V+ TN S ++
Sbjct: 66 GDVSKKEEISEVINKILTEH-KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFY 124
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
++Q + + G II ISS+ G+ + Y+SSK + TK+LA E A I V
Sbjct: 125 ITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITV 184
Query: 189 NTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248
N +AP I + + D + + + ++ P R G P EV+++ FL + Y+
Sbjct: 185 NAIAPGFISSDMTDKISE-----QIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYIN 239
Query: 249 GQVICVDGGYS 259
G+V +DGG S
Sbjct: 240 GRVFVIDGGLS 250
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 199 bits (506), Expect = 3e-64
Identities = 75/250 (30%), Positives = 116/250 (46%), Gaps = 13/250 (5%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
L G LVTG KGIG V+ L A GA V SR + +L+ ++E +
Sbjct: 4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG----IEPVCV 59
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
DL E+ + +V G +++L+NNA + + E T+E F N + +
Sbjct: 60 DLGDWEATERALGSV-----GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQV 114
Query: 130 SQLAHPLLKSAGNGN-IIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
SQ+ L + G I+ +SS A+ S+Y S+K A++ LTK +A E KIRV
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRV 174
Query: 189 NTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248
N V P V+ T + D + A M+ R P+ + E V + + FL + T
Sbjct: 175 NAVNPTVVMTSMGQATWSDPHK---AKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTT 231
Query: 249 GQVICVDGGY 258
G + V+GG+
Sbjct: 232 GSTLPVEGGF 241
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Score = 198 bits (504), Expect = 9e-64
Identities = 59/255 (23%), Positives = 106/255 (41%), Gaps = 14/255 (5%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL--QVSGSV 68
+ ALVTG + GIG AV L G V C+R + + E KS G +
Sbjct: 8 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYR 67
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYH 128
CDL + + SQ ++I INNAG P + + + N +
Sbjct: 68 CDLSNEEDILSMFSAIRSQH-SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSI 126
Query: 129 LSQLAHPLLK--SAGNGNIIFISSVAGVIAIPM--CSIYASSKVAMNQLTKNLACEW--A 182
++ A+ +K + +G+II I+S++G +P+ Y+++K A+ LT+ L E A
Sbjct: 127 CTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREA 186
Query: 183 KDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS 242
+ IR ++P V+ T + + + ++ +P +V+ V ++ +
Sbjct: 187 QTHIRATCISPGVVETQFAFKLHD-----KDPEKAAATYEQMKCLKPEDVAEAVIYVLST 241
Query: 243 ATSYVTGQVICVDGG 257
G + G
Sbjct: 242 PAHIQIGDIQMRPTG 256
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Score = 198 bits (504), Expect = 1e-63
Identities = 65/260 (25%), Positives = 118/260 (45%), Gaps = 11/260 (4%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL---QVSGS 67
G + ++TG + GIG + A GA V RNE L + Q+ G+ +++
Sbjct: 2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAV 61
Query: 68 VCDLKIRAQREKLMETVSSQFDGKLNILINNA--GTFIPKETTEFTEEDFSTVMTTNFES 125
V D+ + ++ ++ T ++F GK++IL+NNA T+ E + NF++
Sbjct: 62 VADVTEASGQDDIINTTLAKF-GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQA 120
Query: 126 AYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDK 185
++Q L + S VAG A YA +K A++Q T+ A + +
Sbjct: 121 VIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHG 180
Query: 186 IRVNTVAPWVIRTPLLDTV----EKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC- 240
+RVN+V+P + T + + P+ G+P E+++++ FL
Sbjct: 181 VRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLAD 240
Query: 241 LSATSYVTGQVICVDGGYSV 260
+ +SY+ GQ I DGG ++
Sbjct: 241 RNLSSYIIGQSIVADGGSTL 260
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Score = 196 bits (500), Expect = 2e-63
Identities = 68/250 (27%), Positives = 117/250 (46%), Gaps = 12/250 (4%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
LK L+TG GIG A +E A GA + C E L + + + + V D
Sbjct: 3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPV-----VMD 57
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
+ A E+ + G+L+ +++ AG + ED+ V+ N ++ ++
Sbjct: 58 VADPASVERGFAEALAHL-GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVA 116
Query: 131 QLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNT 190
+ A ++ G+I+ +S + + YA+S + LT+ LA E + IRVNT
Sbjct: 117 KAASEAMREKNPGSIVLTASRVYL-GNLGQANYAASMAGVVGLTRTLALELGRWGIRVNT 175
Query: 191 VAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQ 250
+AP I T + V + + + + TP+ R G+P EV+ FL +S++TGQ
Sbjct: 176 LAPGFIETRMTAKVPE-----KVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQ 230
Query: 251 VICVDGGYSV 260
V+ VDGG ++
Sbjct: 231 VLFVDGGRTI 240
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Score = 196 bits (500), Expect = 3e-63
Identities = 69/260 (26%), Positives = 111/260 (42%), Gaps = 15/260 (5%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEW-KSKGLQVSGSV 68
S T +VTGG +GIG A +AA GA V R+ + + ++ K G++
Sbjct: 6 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQ 65
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYH 128
CD+ K ++ + + G ++ LI NAG + K TE T EDF+ V N ++
Sbjct: 66 CDVSNTDIVTKTIQQIDADL-GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFN 124
Query: 129 LSQLAHPLLKSAGNGNIIFISS--------VAGVIAIPMCSIYASSKVAMNQLTKNLACE 180
+ L I ++S + + Y SSK A + L K LA E
Sbjct: 125 TCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAE 184
Query: 181 WAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC 240
WA IRVN ++P + T ++K + + P+ R +P E++ L
Sbjct: 185 WASAGIRVNALSPGYVNTDQTAHMDK-----KIRDHQASNIPLNRFAQPEEMTGQAILLL 239
Query: 241 LSATSYVTGQVICVDGGYSV 260
+Y+TG +DGG +
Sbjct: 240 SDHATYMTGGEYFIDGGQLI 259
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 194 bits (493), Expect = 2e-62
Identities = 68/252 (26%), Positives = 116/252 (46%), Gaps = 12/252 (4%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
L G ++T +GIG A A GA V NE++L + K + V D
Sbjct: 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQE-----LEKYPGIQTRVLD 58
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
+K + +L++L N AG + E+D+ M N S Y +
Sbjct: 59 -----VTKKKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMI 113
Query: 131 QLAHPLLKSAGNGNIIFISSVAGVIAIPMC-SIYASSKVAMNQLTKNLACEWAKDKIRVN 189
+ P + + +GNII +SSVA + + +Y+++K A+ LTK++A ++ + IR N
Sbjct: 114 KAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCN 173
Query: 190 TVAPWVIRTPLL-DTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248
V P + TP L + ++ N E N + R R E++ + +L ++YVT
Sbjct: 174 CVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVT 233
Query: 249 GQVICVDGGYSV 260
G + +DGG+S+
Sbjct: 234 GNPVIIDGGWSL 245
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Score = 194 bits (495), Expect = 3e-62
Identities = 68/255 (26%), Positives = 115/255 (45%), Gaps = 5/255 (1%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
L+ A++TGG GIG + +GA V + + S +S CD
Sbjct: 4 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD-VISFVHCD 62
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFI--PKETTEFTEEDFSTVMTTNFESAYH 128
+ L++T ++ GKL+I+ N G P E EDF VM N A+
Sbjct: 63 VTKDEDVRNLVDTTIAKH-GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFL 121
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVIA-IPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
+++ A ++ A G+I+F +S++ A + +Y ++K A+ LT +L E + IR
Sbjct: 122 VAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIR 181
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
VN V+P+++ +PLL V + +V+ VA+L + YV
Sbjct: 182 VNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYV 241
Query: 248 TGQVICVDGGYSVTG 262
+G + +DGGY+ T
Sbjct: 242 SGLNLVIDGGYTRTN 256
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 195 bits (496), Expect = 4e-62
Identities = 78/258 (30%), Positives = 119/258 (46%), Gaps = 8/258 (3%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWK-----SKGLQVS 65
L+G A+VTGG GIG A+V+EL G+ V SR L E + +K +V
Sbjct: 10 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 69
Query: 66 GSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFES 125
C+++ + L+++ F GK+N L+NN G + + + V+ TN
Sbjct: 70 PIQCNIRNEEEVNNLVKSTLDTF-GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTG 128
Query: 126 AYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDK 185
+++ + + G+I+ I V P+ +++ + LTK+LA EWA
Sbjct: 129 TFYMCKAVYSSWMKEHGGSIVNII-VPTKAGFPLAVHSGAARAGVYNLTKSLALEWACSG 187
Query: 186 IRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245
IR+N VAP VI + + P R G P EVSSVV FL A S
Sbjct: 188 IRINCVAPGVIYSQTAVENYGSWG-QSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAAS 246
Query: 246 YVTGQVICVDGGYSVTGF 263
++TGQ + VDGG S+
Sbjct: 247 FITGQSVDVDGGRSLYTH 264
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Score = 193 bits (491), Expect = 1e-61
Identities = 72/264 (27%), Positives = 110/264 (41%), Gaps = 17/264 (6%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
LKG L+TGG G+G A+V+ A GA V ++ L + + G V G V D
Sbjct: 3 LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETD---HGDNVLGIVGD 59
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEF-----TEEDFSTVMTTNFES 125
++ +++ ++F GK++ LI NAG + + F V N +
Sbjct: 60 VRSLEDQKQAASRCVARF-GKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKG 118
Query: 126 AYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDK 185
H + P L A GN+IF S AG +Y ++K A+ L + LA E A
Sbjct: 119 YIHAVKACLPALV-ASRGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELA-PY 176
Query: 186 IRVNTVAPWVIRTPLLDTV-----EKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC 240
+RVN V I + L K + + A+ + P+ R E E + F
Sbjct: 177 VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVFFA 236
Query: 241 LSAT-SYVTGQVICVDGGYSVTGF 263
+ TG ++ DGG V GF
Sbjct: 237 TRGDAAPATGALLNYDGGLGVRGF 260
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Score = 192 bits (488), Expect = 2e-61
Identities = 85/258 (32%), Positives = 125/258 (48%), Gaps = 11/258 (4%)
Query: 1 MSDFREQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK 60
+ R L G A++TG GIG + A GA V N N + E +
Sbjct: 4 SDNLR-----LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL 58
Query: 61 GLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMT 120
G Q CD+ + L + S+ GK++IL+NNAG PK + DF
Sbjct: 59 GGQAFACRCDITSEQELSALADFAISKL-GKVDILVNNAGGGGPK-PFDMPMADFRRAYE 116
Query: 121 TNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACE 180
N S +HLSQL P ++ G G I+ I+S+A + YASSK A + L +N+A +
Sbjct: 117 LNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFD 176
Query: 181 WAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC 240
+ IRVN +AP I T L +V E +M+ TP+ R G+P ++++ FLC
Sbjct: 177 LGEKNIRVNGIAPGAILTDALKSVITP----EIEQKMLQHTPIRRLGQPQDIANAALFLC 232
Query: 241 LSATSYVTGQVICVDGGY 258
A S+V+GQ++ V GG
Sbjct: 233 SPAASWVSGQILTVSGGG 250
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 192 bits (489), Expect = 6e-61
Identities = 53/257 (20%), Positives = 108/257 (42%), Gaps = 29/257 (11%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIV---------HTCSRNETELNQRIQEWKSKG 61
G LVTG G+G A A GA+V + + ++ ++E + +G
Sbjct: 5 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG 64
Query: 62 LQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTT 121
+ + + EKL++T F G++++++NNAG + + ++ED+ +
Sbjct: 65 GKAVANYDSV---EAGEKLVKTALDTF-GRIDVVVNNAGILRDRSFSRISDEDWDIIQRV 120
Query: 122 NFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEW 181
+ ++ +++ A +K G II +S +G+ + Y+++K+ + L L E
Sbjct: 121 HLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEG 180
Query: 182 AKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCL 241
K+ I NT+AP V+ ++ +P V+ +V +LC
Sbjct: 181 RKNNIHCNTIAPNAGSRMT---------------ETVMPEDLVEALKPEYVAPLVLWLC- 224
Query: 242 SATSYVTGQVICVDGGY 258
+ G + V G+
Sbjct: 225 HESCEENGGLFEVGAGW 241
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Score = 189 bits (480), Expect = 3e-60
Identities = 72/255 (28%), Positives = 120/255 (47%), Gaps = 9/255 (3%)
Query: 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLK 72
ALVTG T GIG + L G V C+R E L ++E + G++ G CD++
Sbjct: 2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVR 61
Query: 73 IRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQL 132
+ E L+ V ++ G +++L+NNAG T E +E + V+ TN + +++
Sbjct: 62 SVPEIEALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQ 120
Query: 133 AHPLLKSAGNGNIIFI--SSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNT 190
G + +S G + + Y++SK + TK L E A+ I VN
Sbjct: 121 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 180
Query: 191 VAPWVIRTPLLDTVEKDSNFL------EHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244
V P + TP+ +V + + + E +R+ R P+ R +P+EV+ +VA+L
Sbjct: 181 VCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGA 240
Query: 245 SYVTGQVICVDGGYS 259
+ VT Q + V GG
Sbjct: 241 AAVTAQALNVCGGLG 255
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 189 bits (481), Expect = 4e-60
Identities = 74/257 (28%), Positives = 121/257 (47%), Gaps = 11/257 (4%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-LNQRIQEWKSKGLQVSGSV 68
SL+G ALVTG +GIG + EL G V N TE + + K G +
Sbjct: 15 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVK 74
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYH 128
++ + ++ E F GKL+I+ +N+G + T E+F V T N +
Sbjct: 75 ANVGVVEDIVRMFEEAVKIF-GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFF 133
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
+++ A+ L+ G ++ + A+P ++Y+ SK A+ + +A + A KI V
Sbjct: 134 VAREAYKHLEIGGRLILMGSIT-GQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITV 192
Query: 189 NTVAPWVIRTPLLDTVEKD--------SNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC 240
N VAP I+T + V ++ SN V +P+ R G P +++ VV FL
Sbjct: 193 NVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLA 252
Query: 241 LSATSYVTGQVICVDGG 257
+ +VTG+VI +DGG
Sbjct: 253 SNDGGWVTGKVIGIDGG 269
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 187 bits (477), Expect = 7e-60
Identities = 76/249 (30%), Positives = 120/249 (48%), Gaps = 14/249 (5%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
L G ALV+GG +G+G + V + A GA V + E E V D
Sbjct: 4 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYV---HLD 60
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
+ AQ + ++T + F G L++L+NNAG ++ ++ ++ N +
Sbjct: 61 VTQPAQWKAAVDTAVTAF-GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGI 119
Query: 131 QLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNT 190
+ +K AG G+II ISS+ G+ C Y ++K A+ LTK+ A E IRVN+
Sbjct: 120 RAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNS 179
Query: 191 VAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQ 250
+ P +++TP+ D V +D + +T + R EP EVS++V +L +SY TG
Sbjct: 180 IHPGLVKTPMTDWVPED----------IFQTALGRAAEPVEVSNLVVYLASDESSYSTGA 229
Query: 251 VICVDGGYS 259
VDGG
Sbjct: 230 EFVVDGGTV 238
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Score = 187 bits (475), Expect = 2e-59
Identities = 59/259 (22%), Positives = 107/259 (41%), Gaps = 21/259 (8%)
Query: 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGSVC 69
G ALVTG +GIG A E L GA V N Q + + C
Sbjct: 2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQC 61
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
D+ + Q V F G+L+IL+NNAG E+++ + N S
Sbjct: 62 DVADQQQLRDTFRKVVDHF-GRLDILVNNAG--------VNNEKNWEKTLQINLVSVISG 112
Query: 130 SQLAHPLLK---SAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKN--LACEWAKD 184
+ L + G II +SS+AG++ + +Y +SK + T++ LA
Sbjct: 113 TYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNS 172
Query: 185 KIRVNTVAPWVIRTPLLDTVEKDSN---FLEHANRMVLRTPMLRPGEPNEVSSVVAFLCL 241
+R+N + P + T +L+++EK+ N ++E+ + + +P +++ + L
Sbjct: 173 GVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIE 232
Query: 242 SATSYVTGQVICVDGGYSV 260
+ G ++ + +
Sbjct: 233 DD--ALNGAIMKITTSKGI 249
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Score = 186 bits (473), Expect = 4e-59
Identities = 72/259 (27%), Positives = 117/259 (45%), Gaps = 13/259 (5%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
G LVTG IG A LA G + N L + + KG++ VCD
Sbjct: 3 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCD 62
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFT-EEDFSTVMTTNFESAYHL 129
+ +++V F GK++ L NNAG + +DF+ V+T N A+H+
Sbjct: 63 VTSEEAVIGTVDSVVRDF-GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHV 121
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
+ + + G I+ +S+AGV P + Y +SK A+ LT+ A + A IRVN
Sbjct: 122 LKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVN 181
Query: 190 TVAPWVIRTPLLDTVEKD-----------SNFLEHANRMVLRTPMLRPGEPNEVSSVVAF 238
++P + + + + ++ A +M+ PM R G+ NE+ VVAF
Sbjct: 182 AISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAF 241
Query: 239 LCLSATSYVTGQVICVDGG 257
L +S++TG + + GG
Sbjct: 242 LLGDDSSFMTGVNLPIAGG 260
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Score = 185 bits (470), Expect = 1e-58
Identities = 52/252 (20%), Positives = 97/252 (38%), Gaps = 11/252 (4%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR 74
TA+VT G L+ G V + + ++ + +
Sbjct: 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDE------LEAFAETYPQLKPMSE 55
Query: 75 AQREKLMETVSSQFDGKLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHLSQLA 133
+ +L+E V+S + G++++L++N + ++ ED+ + + L
Sbjct: 56 QEPAELIEAVTSAY-GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAV 114
Query: 134 HPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAP 193
+K +G+IIFI+S S Y S++ L L+ E + I V + P
Sbjct: 115 ASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGP 174
Query: 194 WVIRTPLLDTV---EKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQ 250
+ + E EH + T + R G E+ +VAFL + Y+TGQ
Sbjct: 175 NYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQ 234
Query: 251 VICVDGGYSVTG 262
V + GG+ +
Sbjct: 235 VFWLAGGFPMIE 246
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Score = 184 bits (469), Expect = 1e-58
Identities = 81/252 (32%), Positives = 126/252 (50%), Gaps = 6/252 (2%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN-ETELNQRIQEWKSKGLQVSGSVC 69
L+G ++TG + G+G ++ A A V R+ E E N ++E K G +
Sbjct: 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
D+ + + L+++ +F GKL+++INNAG P + E + D++ V+ TN A+
Sbjct: 65 DVTVESDVINLVQSAIKEF-GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLG 123
Query: 130 SQLAHPLLKS-AGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
S+ A G +I +SSV I P+ YA+SK M +T+ LA E+A IRV
Sbjct: 124 SREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRV 183
Query: 189 NTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248
N + P I TP+ D E + PM GEP E+++V A+L S SYVT
Sbjct: 184 NNIGPGAINTPINAEKFADP---EQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVT 240
Query: 249 GQVICVDGGYSV 260
G + DGG ++
Sbjct: 241 GITLFADGGMTL 252
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Score = 184 bits (468), Expect = 2e-58
Identities = 76/255 (29%), Positives = 121/255 (47%), Gaps = 7/255 (2%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL--QVSGSV 68
L+TGG G+G A LAA GA + + L +V +V
Sbjct: 2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTV 61
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTE-FTEEDFSTVMTTNFESAY 127
D+ AQ E + + +F G+++ NNAG + TE FT +F V++ N +
Sbjct: 62 ADVSDEAQVEAYVTATTERF-GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVF 120
Query: 128 HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
+ +++ G+G ++ +SV G+ I S YA++K + LT+N A E+ + IR
Sbjct: 121 LGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIR 180
Query: 188 VNTVAPWVIRTPLLDTVEKD---SNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244
+N +AP I TP+++ K N + A + P R GE E+++VVAFL
Sbjct: 181 INAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDA 240
Query: 245 SYVTGQVICVDGGYS 259
SYV V+ +DGG S
Sbjct: 241 SYVNATVVPIDGGQS 255
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Score = 183 bits (466), Expect = 3e-58
Identities = 70/250 (28%), Positives = 121/250 (48%), Gaps = 12/250 (4%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
L G T LVTG GIG A ++ A GA + R E L + + +++ + V V D
Sbjct: 3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAV---VAD 59
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
+ E + +F G+L+ + + AG + E + V+ N ++ ++
Sbjct: 60 VSDPKAVEAVFAEALEEF-GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVA 118
Query: 131 QLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNT 190
+ A +L+ G+++ SVAG+ A + YA+ K+ + L + LA E A+ +RVN
Sbjct: 119 RKAGEVLEE--GGSLVLTGSVAGLGAFGLAH-YAAGKLGVVGLARTLALELARKGVRVNV 175
Query: 191 VAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQ 250
+ P +I+TP+ + + V +P+ R G P EV+ FL ++Y+TGQ
Sbjct: 176 LLPGLIQTPMTAGLPP-----WAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQ 230
Query: 251 VICVDGGYSV 260
+ VDGG S+
Sbjct: 231 ALYVDGGRSI 240
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Score = 182 bits (462), Expect = 1e-57
Identities = 79/249 (31%), Positives = 119/249 (47%), Gaps = 20/249 (8%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
++ LV ++GIG AV + L+ GA V C+RNE L + + VCD
Sbjct: 2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRY---------VVCD 52
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
+R + L E V +++IL+ NAG E T EDF + + F + +
Sbjct: 53 --LRKDLDLLFEKV-----KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIV 105
Query: 131 QLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNT 190
+ P +K G G I+ I+S + + I S+++A+ K L+ E A I VN
Sbjct: 106 RNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNC 165
Query: 191 VAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQ 250
VAP T + + + E ++ + PM R +P E++SVVAFLC SY+TGQ
Sbjct: 166 VAPGWTETERVKELLSE----EKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQ 221
Query: 251 VICVDGGYS 259
I VDGG S
Sbjct: 222 TIVVDGGLS 230
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 182 bits (463), Expect = 1e-57
Identities = 63/256 (24%), Positives = 107/256 (41%), Gaps = 11/256 (4%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
L G AL TG +GIG + EL GA +V + + + E K G Q
Sbjct: 4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQA 63
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
D+ ++ L + S F G L+ +++N+G + + E T+E F V N + +
Sbjct: 64 DISKPSEVVALFDKAVSHF-GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFV 122
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
+Q + G + S A + IP ++YA SK A+ + A + + VN
Sbjct: 123 AQQGLKHCRRGGRIIL-TSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVN 181
Query: 190 TVAPWVIRTPLLDTVEKDSNFL--------EHANRMVLRTPMLRPGEPNEVSSVVAFLCL 241
+AP ++T + D + + P+ R G P ++ V+ LC
Sbjct: 182 CIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALCQ 241
Query: 242 SATSYVTGQVICVDGG 257
+ ++ GQVI + GG
Sbjct: 242 EESEWINGQVIKLTGG 257
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Score = 182 bits (463), Expect = 3e-57
Identities = 63/255 (24%), Positives = 107/255 (41%), Gaps = 5/255 (1%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-GLQVSGSV 68
S +G A +TGG G+G + L++ GA SR L ++ S+ G +V
Sbjct: 22 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQ 81
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAY- 127
CD++ + + + G NI+INNA T + + T+
Sbjct: 82 CDVRDPDMVQNTVSELIKVA-GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAF 140
Query: 128 HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
++ L+K+ + I+++ AS+K + ++K+LA EW K +R
Sbjct: 141 VTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMR 200
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
N + P I+T + + M+ R P R G E++++ AFLC S++
Sbjct: 201 FNVIQPGPIKTKGAFSRLDPTG--TFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWI 258
Query: 248 TGQVICVDGGYSVTG 262
G VI DGG V
Sbjct: 259 NGAVIKFDGGEEVLI 273
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Score = 180 bits (458), Expect = 6e-57
Identities = 46/254 (18%), Positives = 83/254 (32%), Gaps = 20/254 (7%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQ-EWKSKGLQVSGSV 68
L + GIG EL + + + + ++
Sbjct: 2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61
Query: 69 CDLKI-RAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAY 127
D+ + A+ +KL++ + Q ++ILIN AG + + NF
Sbjct: 62 YDVTVPVAESKKLLKKIFDQL-KTVDILINGAGIL--------DDHQIERTIAINFTGLV 112
Query: 128 HLSQLAHPLLK---SAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKD 184
+ + G I I SV G AI +Y++SK A+ T +LA
Sbjct: 113 NTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPIT 172
Query: 185 KIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244
+ ++ P + RTPL+ T V + P + +E +
Sbjct: 173 GVTAYSINPGITRTPLVHTFNSW----LDVEPRVAELLLSHPTQTSEQ--CGQNFVKAIE 226
Query: 245 SYVTGQVICVDGGY 258
+ G + +D G
Sbjct: 227 ANKNGAIWKLDLGT 240
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Score = 180 bits (458), Expect = 7e-57
Identities = 76/258 (29%), Positives = 121/258 (46%), Gaps = 10/258 (3%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEW--KSKGLQVSGSV 68
LKG A+VTG T GIG + LAA GA + + ++++ G++V
Sbjct: 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYH 128
DL L++ Q G+++IL+NNAG +F E + ++ N + +H
Sbjct: 62 ADLSKGEAVRGLVDNAVRQM-GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFH 120
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
+ A P +K G G II I+S G++A S Y ++K + TK A E A I
Sbjct: 121 GTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITA 180
Query: 189 NTVAPWVIRTPLLDTV-----EKDSNFLEHANR--MVLRTPMLRPGEPNEVSSVVAFLCL 241
N + P +RTPL++ EK+ E A R + + P L+ P ++ FL
Sbjct: 181 NAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLAS 240
Query: 242 SATSYVTGQVICVDGGYS 259
A + +TG + VDGG++
Sbjct: 241 DAAAQITGTTVSVDGGWT 258
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Score = 179 bits (456), Expect = 1e-56
Identities = 68/247 (27%), Positives = 117/247 (47%), Gaps = 8/247 (3%)
Query: 16 ALVTGGTKGIGYAVVEELAAFGAIVH-TCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR 74
+VTG ++GIG A+ L G V +R+ + ++ ++ G Q D+
Sbjct: 4 VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKE 63
Query: 75 AQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAH 134
A E +M+T + G +++++NNAG + + V+ N + +Q A
Sbjct: 64 ADVEAMMKTAIDAW-GTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAAT 122
Query: 135 PLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPW 194
++ G II I+SV G+I + YA++K + +K A E A I VN V P
Sbjct: 123 KIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPG 182
Query: 195 VIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS-ATSYVTGQVIC 253
I + + + +D +++ P+ R G+P V+ +V FL LS A SY+TGQ
Sbjct: 183 FIASDMTAKLGED-----MEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFT 237
Query: 254 VDGGYSV 260
+DGG ++
Sbjct: 238 IDGGIAI 244
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Score = 179 bits (455), Expect = 1e-56
Identities = 54/240 (22%), Positives = 95/240 (39%), Gaps = 10/240 (4%)
Query: 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGS 67
R S+ G L+TG GIG E A + + N+ L + + K G +V
Sbjct: 2 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTF 61
Query: 68 VCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAY 127
V D R + V ++ G ++IL+NNAG + + N + +
Sbjct: 62 VVDCSNREDIYSSAKKVKAEI-GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHF 120
Query: 128 HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDK-- 185
++ P + +G+I+ ++S AG +++P Y SSK A K L E A +
Sbjct: 121 WTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQIT 180
Query: 186 -IRVNTVAPWVIRTPLLDTVEKDSNFL----EHANRMVLRTPMLRPGEPNEVSSVVAFLC 240
++ + P + T + E NR++ +L + + S +AFL
Sbjct: 181 GVKTTCLCPNFVNTGFIKNPSTSLGPTLEPEEVVNRLMH--GILTEQKMIFIPSSIAFLT 238
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Score = 178 bits (452), Expect = 3e-56
Identities = 73/247 (29%), Positives = 124/247 (50%), Gaps = 9/247 (3%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
+G ALVTG ++GIG A+ E LAA GA V + +E + G + + +
Sbjct: 2 FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGL---MLN 58
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
+ A E ++E + ++F G+++IL+NNAG +E+++ ++ TN S + LS
Sbjct: 59 VTDPASIESVLEKIRAEF-GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS 117
Query: 131 QLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNT 190
+ + +G II I SV G + + YA++K + +K+LA E A I VN
Sbjct: 118 KAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNV 177
Query: 191 VAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQ 250
VAP I T + + + ++ + P R G E+++ VAFL +Y+TG+
Sbjct: 178 VAPGFIETDM-----TRALSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGE 232
Query: 251 VICVDGG 257
+ V+GG
Sbjct: 233 TLHVNGG 239
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 169 bits (429), Expect = 9e-53
Identities = 71/248 (28%), Positives = 110/248 (44%), Gaps = 17/248 (6%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
+ LVTGG +GIG A+ + LAA G V R + G
Sbjct: 4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG-----------LFGVEV 52
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
D+ ++ V + +L++NAG TEE F V+ N A+ +
Sbjct: 53 DVTDSDAVDRAFTAVEEHQG-PVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRV 111
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
+Q A ++ G +IFI SV+G+ I + YA+SK + + +++A E +K + N
Sbjct: 112 AQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTAN 171
Query: 190 TVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTG 249
VAP I T + +++ + P R G P EV+ VV+FL SY++G
Sbjct: 172 VVAPGYIDTDMTRALDER-----IQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISG 226
Query: 250 QVICVDGG 257
VI VDGG
Sbjct: 227 AVIPVDGG 234
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Score = 169 bits (429), Expect = 1e-52
Identities = 62/258 (24%), Positives = 103/258 (39%), Gaps = 11/258 (4%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
L G TAL+TG +GIG A E GA V N E + D
Sbjct: 3 LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAI---ALD 59
Query: 71 LKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLS 130
+ +A ++ + + ++ G ++IL+NNA F E T E + + N +
Sbjct: 60 VTDQASIDRCVAELLDRW-GSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMM 118
Query: 131 QLAHPL-LKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
Q + G II ++S AG + +Y ++K A+ LT++ + I VN
Sbjct: 119 QAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVN 178
Query: 190 TVAPWVIRTPLLDTVEK------DSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243
+AP V+ D V+ + E ++ P R G +++ + FL
Sbjct: 179 AIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATPE 238
Query: 244 TSYVTGQVICVDGGYSVT 261
Y+ Q VDGG ++
Sbjct: 239 ADYIVAQTYNVDGGNWMS 256
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Score = 169 bits (428), Expect = 2e-52
Identities = 67/253 (26%), Positives = 101/253 (39%), Gaps = 8/253 (3%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR 74
ALVTG +GIG A+ L G V N+ E G D+ R
Sbjct: 3 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDR 62
Query: 75 AQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAH 134
Q +E G ++++NNAG T E V N + Q A
Sbjct: 63 DQVFAAVEQARKTL-GGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAV 121
Query: 135 PL-LKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAP 193
K G II S AG + P ++Y+SSK A+ LT+ A + A I VN P
Sbjct: 122 EAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCP 181
Query: 194 WVIRTPLLDTVEKD------SNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
+++TP+ +++ R + R EP +V++ V++L + Y+
Sbjct: 182 GIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDYM 241
Query: 248 TGQVICVDGGYSV 260
TGQ + +DGG
Sbjct: 242 TGQSLLIDGGMVF 254
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Score = 167 bits (423), Expect = 9e-52
Identities = 60/258 (23%), Positives = 106/258 (41%), Gaps = 13/258 (5%)
Query: 11 LKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSV 68
L G ALV G T + +G+A+ +L GA V + E L ++
Sbjct: 6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAE-RLRPEAEKLAEALGGALLFR 64
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIP----KETTEFTEEDFSTVMTTNFE 124
D+ + + L V F G L+ L++ + +D+ + +
Sbjct: 65 ADVTQDEELDALFAGVKEAF-GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAY 123
Query: 125 SAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKD 184
S +++ A PLL+ G I+ ++ A +P ++ A +K A+ + LA E
Sbjct: 124 SLVAVARRAEPLLR--EGGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPK 181
Query: 185 KIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244
+RVN ++ +RT F + +R+ P+ R EV ++ FL
Sbjct: 182 GVRVNAISAGPVRTV---AARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLA 238
Query: 245 SYVTGQVICVDGGYSVTG 262
S +TG+V+ VD GY + G
Sbjct: 239 SGITGEVVYVDAGYHIMG 256
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Score = 164 bits (417), Expect = 6e-51
Identities = 62/251 (24%), Positives = 104/251 (41%), Gaps = 24/251 (9%)
Query: 16 ALVTGGTKGIGYAVVEELAAFGA-------IVHTCSRNETELNQRIQEWKSKGLQVSGSV 68
L+TG KGIG A+ E A ++ SR +L + E +++G
Sbjct: 4 LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTIT 63
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYH 128
D+ A +L + ++ G ++ L+NNAG ++ TEEDF M TN + +
Sbjct: 64 ADISDMADVRRLTTHIVERY-GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFF 122
Query: 129 LSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRV 188
L+Q L++ +G+I FI+SVA A SIY SK L + + K +R+
Sbjct: 123 LTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRI 182
Query: 189 NTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248
V P + TP+ V+ + P ++++ V L + V
Sbjct: 183 TDVQPGAVYTPMWGKVDDE--------------MQALMMMPEDIAAPVVQAYLQPSRTVV 228
Query: 249 GQVIC--VDGG 257
++I G
Sbjct: 229 EEIILRPTSGD 239
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 158 bits (401), Expect = 2e-48
Identities = 46/256 (17%), Positives = 96/256 (37%), Gaps = 16/256 (6%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAF---GAIVHTCSRNETELNQRIQEWKSK--GLQV 64
L ++TG ++G G A+ +LA G+++ +R+E+ L Q +E ++ L+V
Sbjct: 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKV 62
Query: 65 SGSVCDLKIRAQREK---LMETVSSQFDGKLNILINNAGTFI---PKETTEFTEEDFSTV 118
+ DL A ++ + + + +LINNA T + +
Sbjct: 63 VLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNY 122
Query: 119 MTTNFESAYHLSQLAHPLLKSAGNGNII--FISSVAGVIAIPMCSIYASSKVAMNQLTKN 176
N S L+ + + + ISS+ + +Y + K A + L +
Sbjct: 123 WALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQV 182
Query: 177 LACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVV 236
LA E +RV + AP + + + S E +++ + + +
Sbjct: 183 LAAEE--PSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKL 240
Query: 237 AFLCLSATSYVTGQVI 252
L ++ +G +
Sbjct: 241 LGLL-QKDTFQSGAHV 255
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 156 bits (395), Expect = 1e-47
Identities = 57/252 (22%), Positives = 93/252 (36%), Gaps = 28/252 (11%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR 74
+ALVTGG G+G A L A G V +G + D+
Sbjct: 3 SALVTGGASGLGRAAALALKARGYRVVVLDLRR------------EGEDLIYVEGDVTRE 50
Query: 75 AQREKLMETVSSQFDGK--LNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQL 132
+ + + ++ I + E F V+ N +++ +L
Sbjct: 51 EDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRL 110
Query: 133 AHPL------LKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKI 186
A G I+ +SVA + YA+SK + LT A E A I
Sbjct: 111 AAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGI 170
Query: 187 RVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPML-RPGEPNEVSSVVAFLCLSATS 245
RV TVAP + TPLL + + + + + P R G P E +++V + +
Sbjct: 171 RVVTVAPGLFDTPLLQGLPE-----KAKASLAAQVPFPPRLGRPEEYAALVLHILEN--P 223
Query: 246 YVTGQVICVDGG 257
+ G+V+ +DG
Sbjct: 224 MLNGEVVRLDGA 235
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Score = 155 bits (392), Expect = 5e-47
Identities = 53/259 (20%), Positives = 107/259 (41%), Gaps = 14/259 (5%)
Query: 11 LKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSV 68
L G LVTG I Y + + + GA + +N+ +L R++E+ ++
Sbjct: 3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQ 61
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAG-----TFIPKETTEFTEEDFSTVMTTNF 123
CD+ A + + + + K + +++ G T E F +
Sbjct: 62 CDVAEDASIDTMFAELGKVWP-KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISS 120
Query: 124 ESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAK 183
S +++ +L ++ +S + AIP ++ +K ++ + +A
Sbjct: 121 YSFVAMAKACRSMLN--PGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGP 178
Query: 184 DKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243
+ +RVN ++ IRT ++ L H TP+ R +V + AFLC
Sbjct: 179 EGVRVNAISAGPIRTLAASGIKDFRKMLAHCEA---VTPIRRTVTIEDVGNSAAFLCSDL 235
Query: 244 TSYVTGQVICVDGGYSVTG 262
++ ++G+V+ VDGG+S+
Sbjct: 236 SAGISGEVVHVDGGFSIAA 254
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Score = 153 bits (388), Expect = 2e-46
Identities = 53/269 (19%), Positives = 100/269 (37%), Gaps = 31/269 (11%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEW--KSKGLQVSGSVCDLK 72
A++TGG + IG+++ L G V R+ QR+ ++ DL
Sbjct: 3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 62
Query: 73 ----IRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFST----------- 117
+ E +++ F G+ ++L+NNA + P + + +
Sbjct: 63 LSSSLLDCCEDIIDCSFRAF-GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAE 121
Query: 118 -----VMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQ 172
+ F + + N +++ + + +P +Y +K A+
Sbjct: 122 LFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGG 181
Query: 173 LTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRP-GEPNE 231
LT+ A E A IRVN VAP + P E + + P+ + +
Sbjct: 182 LTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQEEYRR-------KVPLGQSEASAAQ 234
Query: 232 VSSVVAFLCLSATSYVTGQVICVDGGYSV 260
++ +AFL Y+TG + VDGG +
Sbjct: 235 IADAIAFLVSKDAGYITGTTLKVDGGLIL 263
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 146 bits (370), Expect = 6e-44
Identities = 60/254 (23%), Positives = 108/254 (42%), Gaps = 16/254 (6%)
Query: 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVC 69
S+KG+ A++TGG G+G A E L GA + + ++ + + V
Sbjct: 2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVT 61
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILI--NNAGTFIPKETTEFTEEDFSTVMTTNFESAY 127
K L + + D +N + T+ K+ T EDF V+ N +
Sbjct: 62 SEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTF 121
Query: 128 HLSQLAHPLLKSA------GNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEW 181
++ +L + G II +SVA + Y++SK + +T +A +
Sbjct: 122 NVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDL 181
Query: 182 AKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPML-RPGEPNEVSSVVAFLC 240
A IRV T+AP + TPLL ++ + + N + + P R G+P E + +V +
Sbjct: 182 APIGIRVMTIAPGLFGTPLLTSLPE-----KVCNFLASQVPFPSRLGDPAEYAHLVQAII 236
Query: 241 LSATSYVTGQVICV 254
+ ++ G+VI +
Sbjct: 237 EN--PFLNGEVIRL 248
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 144 bits (364), Expect = 1e-42
Identities = 55/257 (21%), Positives = 103/257 (40%), Gaps = 11/257 (4%)
Query: 3 DFREQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL 62
+FR + L+G +VTG +KGIG + LA GA V +R++ L + + G
Sbjct: 6 EFRPEM--LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA 63
Query: 63 QVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTN 122
+ + + + + G L++LI N T M N
Sbjct: 64 ASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVN 123
Query: 123 FESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWA 182
F S L+ A P+LK NG+I+ +SS+AG +A PM + Y++SK A++ ++ E++
Sbjct: 124 FLSYVVLTVAALPMLK-QSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYS 182
Query: 183 KDK--IRVNTVAPWVIRTPLLDTVEKDSNFL------EHANRMVLRTPMLRPGEPNEVSS 234
+ + + +I T + E A ++ + + + S
Sbjct: 183 VSRVNVSITLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGALRQEEVYYDSSL 242
Query: 235 VVAFLCLSATSYVTGQV 251
L + + + +
Sbjct: 243 WTTLLIRNPSRKILEFL 259
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 141 bits (356), Expect = 2e-41
Identities = 60/285 (21%), Positives = 98/285 (34%), Gaps = 71/285 (24%)
Query: 16 ALVTGGTKGIGYAVVEELA-AFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR 74
ALVTGG KGIG A+V +L F V +R+ T +Q+ +++GL D+
Sbjct: 6 ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDL 65
Query: 75 AQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAH 134
L + + ++ G L++L+NNAG M TNF +
Sbjct: 66 QSIRALRDFLRKEY-GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELL 124
Query: 135 PLLKSAGNGNIIFISSVAGVIAIPMC---------------------------------- 160
PL+K G ++ +SS+ V A+ C
Sbjct: 125 PLIK--PQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVH 182
Query: 161 -------SIYASSKVAMNQLTKNLACEWAK----DKIRVNTVAPWVIRTPLLDTVEKDSN 209
S Y +K+ + L++ A + ++ DKI +N P +RT +
Sbjct: 183 QKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM--------- 233
Query: 210 FLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA--TSYVTGQVI 252
P E + +L L GQ +
Sbjct: 234 -----------AGPKATKSPEEGAETPVYLALLPPDAEGPHGQFV 267
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 140 bits (352), Expect = 4e-41
Identities = 60/265 (22%), Positives = 103/265 (38%), Gaps = 40/265 (15%)
Query: 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRA 75
+++G GIG A + L A G + + E+ + DL
Sbjct: 4 IVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV-----------------IADLSTAE 46
Query: 76 QREKLMETVSSQFDGKLNILINNAGTFIPKETTE--------------------FTEEDF 115
R++ + V ++ ++ L+ AG + +
Sbjct: 47 GRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQ 106
Query: 116 STVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSI-YASSKVAMNQLT 174
+ + ++ HL+ +PL + G ++ ++ YA SK A+
Sbjct: 107 PAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAV 166
Query: 175 KNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSS 234
+ A W + +R+NT+AP TPLL +D + E + V PM R EP+E++S
Sbjct: 167 RKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFV--PPMGRRAEPSEMAS 224
Query: 235 VVAFLCLSATSYVTGQVICVDGGYS 259
V+AFL A SYV G I +DGG
Sbjct: 225 VIAFLMSPAASYVHGAQIVIDGGID 249
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 139 bits (351), Expect = 1e-40
Identities = 45/256 (17%), Positives = 91/256 (35%), Gaps = 24/256 (9%)
Query: 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSR------NETELNQRIQEWKSKGLQVSGSVC 69
L+TG + GIG + LA+ + + L + + +
Sbjct: 5 VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQL 64
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
D++ E V+ ++L+ NAG + E+ ++V+ N +
Sbjct: 65 DVRDSKSVAAARERVTEGRV---DVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRM 121
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVN 189
Q P +K G+G ++ SV G++ +P +Y +SK A+ L ++LA + ++
Sbjct: 122 LQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLS 181
Query: 190 TVAPWVIRTPLLDTVEK------DSNFLEHANRMV------LRTPMLRPGEPNEVSSVVA 237
+ + T ++ V D + +R + P EV+ V
Sbjct: 182 LIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFL 241
Query: 238 FLCLS---ATSYVTGQ 250
+ Y T +
Sbjct: 242 TALRAPKPTLRYFTTE 257
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 133 bits (335), Expect = 9e-39
Identities = 40/257 (15%), Positives = 77/257 (29%), Gaps = 32/257 (12%)
Query: 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDL 71
+ LV GG +G V+ A V + E E K
Sbjct: 1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVK----------MTD 50
Query: 72 KIRAQREKLMETVSSQF-DGKLNILINNAGTFIPKET-TEFTEEDFSTVMTTNFESAYHL 129
Q +++ V D K++ ++ AG + ++ ++ + + ++
Sbjct: 51 SFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTIS 110
Query: 130 SQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWA--KDKIR 187
S LA G + + A + P Y +K A++QL ++LA + +
Sbjct: 111 SHLATK--HLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAA 168
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247
V P + TP + + +
Sbjct: 169 AIAVLPVTLDTP-------------MNRKSMPEADFSSWTPLEFLVETFHDWITGNKRPN 215
Query: 248 TG---QVICVDGGYSVT 261
+G QV+ DG +T
Sbjct: 216 SGSLIQVVTTDGKTELT 232
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Score = 126 bits (317), Expect = 9e-36
Identities = 67/286 (23%), Positives = 109/286 (38%), Gaps = 48/286 (16%)
Query: 16 ALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKG------------- 61
ALVTG K +G ++ E L A G + R+ E N ++
Sbjct: 5 ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 64
Query: 62 -----LQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDF- 115
+ + + + + +L+ + + G+ ++L+NNA +F P E+
Sbjct: 65 VATAPVSGADGSAPVTLFTRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRNDEDGHE 123
Query: 116 -------------STVMTTNFESAYHLSQLAH------PLLKSAGNGNIIFISSVAGVIA 156
+ + +N + Y L + P N +II +
Sbjct: 124 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP 183
Query: 157 IPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANR 216
+ +IY +K A+ LT++ A E A +IRVN V P + D
Sbjct: 184 LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV-------DDMPPAVWEG 236
Query: 217 MVLRTPML-RPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261
+ P+ R EVS VV FLC S Y+TG + VDGGYS+T
Sbjct: 237 HRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT 282
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Score = 126 bits (316), Expect = 1e-35
Identities = 52/256 (20%), Positives = 92/256 (35%), Gaps = 9/256 (3%)
Query: 11 LKGMTALVTG--GTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSV 68
LKG L+ G K I Y + + GA + NE L +R++ +
Sbjct: 3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE-SLEKRVRPIAQELNSPYVYE 61
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYH 128
D+ + L +V G L+ ++++ + E + T E + +
Sbjct: 62 LDVSKEEHFKSLYNSVKKDL-GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVY 120
Query: 129 LSQLAHPLLKSAGNGNIIFISSV--AGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKI 186
LK N ++ + ++ +K A+ + LA + K I
Sbjct: 121 SLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHI 180
Query: 187 RVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246
RVN ++ IRT + + P+ + EV + +L S +S
Sbjct: 181 RVNALSAGPIRTLASSGIADFR---MILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSG 237
Query: 247 VTGQVICVDGGYSVTG 262
V+G+V VD GY V G
Sbjct: 238 VSGEVHFVDAGYHVMG 253
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Score = 123 bits (310), Expect = 6e-35
Identities = 48/210 (22%), Positives = 76/210 (36%), Gaps = 25/210 (11%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVH--TCSRNETELNQRIQEWKSKGLQVSGSVCDLK 72
+ +VTG +GIG +V++L I H +R+ + + K +V +
Sbjct: 5 SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI---KDSRVHVLPLTVT 61
Query: 73 IRAQREKLMETVSSQFDGK-LNILINNAGTFIPKET-TEFTEEDFSTVMTTNFESAYHLS 130
+ + V L++LINNAG + T TE + + N S L+
Sbjct: 62 CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLT 121
Query: 131 QLAHPLLKSAGNGNIIFISSV------------------AGVIAIPMCSIYASSKVAMNQ 172
Q PLLK+A + SV A Y SK A+N
Sbjct: 122 QKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINM 181
Query: 173 LTKNLACEWAKDKIRVNTVAPWVIRTPLLD 202
+ LA + D + V P ++T L
Sbjct: 182 FGRTLAVDLKDDNVLVVNFCPGWVQTNLGG 211
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 122 bits (306), Expect = 2e-34
Identities = 36/254 (14%), Positives = 89/254 (35%), Gaps = 33/254 (12%)
Query: 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRA 75
+V GG +G A++E G V + + +
Sbjct: 5 VIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVD----------GNKNWTE 54
Query: 76 QREKLMETVSSQFD-GKLNILINNAGTFIPKETT-EFTEEDFSTVMTTNFESAYHLSQLA 133
Q + ++E +S +++ + AG + + + ++ ++ + S+ ++LA
Sbjct: 55 QEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLA 114
Query: 134 HPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAK--DKIRVNTV 191
G + + A + P Y +K A++ LT +LA + + D V T+
Sbjct: 115 TT--HLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTI 172
Query: 192 APWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLS-ATSYVTGQ 250
P + TP+ +++ + +S + ++ +G
Sbjct: 173 MPVTLDTPMNRKWMPNADH-------------SSWTPLSFISEHLLKWTTETSSRPSSGA 219
Query: 251 VICV---DGGYSVT 261
++ + +G ++T
Sbjct: 220 LLKITTENGTSTIT 233
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 110 bits (274), Expect = 9e-30
Identities = 48/262 (18%), Positives = 93/262 (35%), Gaps = 40/262 (15%)
Query: 15 TALVTGGTKGIGYAVVEELAAF---GAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDL 71
+ L+TG +G+G +V+ L + T RN + + +++ + DL
Sbjct: 4 SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQA-KELEDLAKNHSNIHILEIDL 62
Query: 72 KIRAQREKLMETVS--SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
+ +KL+ + ++ G + N T ++ + TN L
Sbjct: 63 RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIML 122
Query: 130 SQLAHPLLKSAG-----------NGNIIFISSVAGVIAIPMC---SIYASSKVAMNQLTK 175
++ PLLK A II +SS+ G I Y +SK A+N TK
Sbjct: 123 AKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATK 182
Query: 176 NLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSV 235
+L+ + +I ++ P ++T + + P+ P ++
Sbjct: 183 SLSVDLYPQRIMCVSLHPGWVKTDMGGS----------------SAPLDVPTSTGQIVQT 226
Query: 236 VAFLCLSATSYVTGQVICVDGG 257
++ L G + DG
Sbjct: 227 ISKL----GEKQNGGFVNYDGT 244
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Score = 110 bits (274), Expect = 1e-29
Identities = 50/261 (19%), Positives = 81/261 (31%), Gaps = 12/261 (4%)
Query: 11 LKGMTALVTG--GTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSV 68
L G LV+G I + + GA + + L QRI + +
Sbjct: 4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELD 63
Query: 69 CDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMT--TNFESA 126
+ T + KL+ ++++ G D SA
Sbjct: 64 VQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISA 123
Query: 127 YHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKI 186
Y + +A LL G I A+P + +K A+ + + +A E K +
Sbjct: 124 YSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVAREAGKYGV 183
Query: 187 RVNTVAPWVIRTPLLDTVEKDS-------NFLEHANRMVLRTPMLR-PGEPNEVSSVVAF 238
R N VA IRT + + + R P+ + V+ V
Sbjct: 184 RSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCA 243
Query: 239 LCLSATSYVTGQVICVDGGYS 259
L TG +I DGG
Sbjct: 244 LLSDWLPATTGDIIYADGGAH 264
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Score = 107 bits (268), Expect = 2e-28
Identities = 50/288 (17%), Positives = 91/288 (31%), Gaps = 38/288 (13%)
Query: 10 SLKGMTALVTG--GTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQ---- 63
L+G A + G G G+AV + LAA GA + + + K Q
Sbjct: 5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVL 64
Query: 64 ----------------------------VSGSVCDLKIRAQREKLMETVSSQFDGKLNIL 95
+ ++ E V F ++
Sbjct: 65 PDGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILV 124
Query: 96 INNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVI 155
+ A + T + ++ + + G +I + I
Sbjct: 125 HSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERI 184
Query: 156 AIPMCSIYASSKVAMNQLTKNLACEWAKDK-IRVNTVAPWVIRTPLLDTVEKDSNFLEHA 214
+S+K A+ T+ LA E + + IRVNT++ + + + +E++
Sbjct: 185 IPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYS 244
Query: 215 NRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVTG 262
P+ + +EV + AFL S +TG I VD G + G
Sbjct: 245 YN---NAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMG 289
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Score = 88.8 bits (218), Expect = 4e-21
Identities = 40/323 (12%), Positives = 95/323 (29%), Gaps = 77/323 (23%)
Query: 16 ALVTG--GTKGIGYAVVEELAAFGAIVHTCSRNET-----------ELNQRIQEWKSKGL 62
+ G T G G+ + +EL+ + + + + K K +
Sbjct: 5 CFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKM 64
Query: 63 QVSGSV---------------------CDLKIRAQREKLMETVSSQFDGKLNILINNAG- 100
+ + ++ E + + ++ GK+N+L+++
Sbjct: 65 NILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKY-GKINMLVHSLAN 123
Query: 101 TFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMC 160
++ T + + + + I + +
Sbjct: 124 AKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVVPGYG 183
Query: 161 SIYASSKVAMNQLTKNLACEWAKDK-IRVNTVAPWVIRTPLLDTVEKDSNFLEHA----- 214
+S+K A+ T+ LA ++ IR+NT++ +++ + K +N E+
Sbjct: 184 GGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTNQNK 243
Query: 215 -----------------------------------NRMVLRTPMLRPGEPNEVSSVVAFL 239
P+ + ++ SV +FL
Sbjct: 244 NRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFL 303
Query: 240 CLSATSYVTGQVICVDGGYSVTG 262
+ +TGQ I VD G ++
Sbjct: 304 LSRESRAITGQTIYVDNGLNIMF 326
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Score = 75.3 bits (184), Expect = 3e-17
Identities = 25/183 (13%), Positives = 57/183 (31%), Gaps = 15/183 (8%)
Query: 5 REQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQV 64
+ S+KG A+V GT +G LA GA V C R + + +V
Sbjct: 15 KAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF-KV 73
Query: 65 SGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFE 124
+ + + A R + ++ + + + + + +
Sbjct: 74 NVTAAETADDASRAEAVKGA--------HFVFTAGAIGLE----LLPQAAWQNESSIEIV 121
Query: 125 SAYHLSQ-LAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAK 183
+ Y+ L + + G G + I + + +L ++ +
Sbjct: 122 ADYNAQPPLGIGGIDATDKGKEYGGKRAFGALGIGG-LKLKLHRACIAKLFESSEGVFDA 180
Query: 184 DKI 186
++I
Sbjct: 181 EEI 183
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 71.2 bits (173), Expect = 1e-15
Identities = 20/185 (10%), Positives = 52/185 (28%), Gaps = 1/185 (0%)
Query: 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKI 73
M + GGT +G + LA G + SR E + + E++ S + +
Sbjct: 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNED 60
Query: 74 RAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLA 133
A+ + ++ + K + S +++
Sbjct: 61 AAEACDIAVLTIPWEHA-IDTARDLKNILREKIVVSPLVPVSRGAKGFTYSSERSAAEIV 119
Query: 134 HPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAP 193
+L+S + + A + + + +K + + + +
Sbjct: 120 AEVLESEKVVSALHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLRPLDA 179
Query: 194 WVIRT 198
+
Sbjct: 180 GPLSN 184
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 70.0 bits (170), Expect = 7e-15
Identities = 50/255 (19%), Positives = 78/255 (30%), Gaps = 26/255 (10%)
Query: 5 REQRWSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNET---ELNQRIQEWKSK 60
+ W G T LVTGGT G+G + LA GA + SR+ + + E ++
Sbjct: 2 TDDEWKPTG-TVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL 60
Query: 61 GLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMT 120
G + + + CD+ R +L+ + + + + A T T E
Sbjct: 61 GARTTVAACDVTDRESVRELLGGIGDDVPL--SAVFHAAATLDDGTVDTLTGERIERASR 118
Query: 121 TNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACE 180
A +L +L L + SS A P YA ++ LA +
Sbjct: 119 AKVLGARNLHELTREL----DLTAFVLFSSFASAFGAPGLGGYAPGNAYLD----GLAQQ 170
Query: 181 WAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC 240
D + VA E R + P A
Sbjct: 171 RRSDGLPATAVAWGTWAGS---------GMAEGPVADRFRRHGVIEMPPETA--CRALQN 219
Query: 241 LSATSYVTGQVICVD 255
+ V VI V
Sbjct: 220 ALDRAEVCPIVIDVR 234
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 42.2 bits (98), Expect = 3e-05
Identities = 27/178 (15%), Positives = 49/178 (27%), Gaps = 11/178 (6%)
Query: 5 REQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQV 64
REQ W + + +TG I + L G V + E
Sbjct: 7 REQYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNE------HMTEDMFCD 60
Query: 65 SGSVCDLKIRAQREKLMETV----SSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMT 120
+ DL++ K+ E V + D I + + I T +
Sbjct: 61 EFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARI 120
Query: 121 TNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLA 178
+ ++ S + + A P + K+A +L K+
Sbjct: 121 NGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQ-DAFGLEKLATEELCKHYN 177
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Score = 41.0 bits (94), Expect = 8e-05
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK 60
+G LVTG + VVE+L G V +R+ ++L + W +K
Sbjct: 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAK 58
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Score = 41.0 bits (94), Expect = 9e-05
Identities = 15/64 (23%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWK-SKGLQ-VSGSV 68
+G VTG T G + L GA V S + + + + G+Q G +
Sbjct: 6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDI 65
Query: 69 CDLK 72
D
Sbjct: 66 RDQN 69
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 40.6 bits (94), Expect = 1e-04
Identities = 31/180 (17%), Positives = 53/180 (29%), Gaps = 27/180 (15%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSR-----NETELNQRIQEWKSKGLQVSGSVC 69
AL+TG T G + E L G VH R N ++ Q+ + +
Sbjct: 3 VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYG 62
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
DL + +++ + + + + N + E E + L
Sbjct: 63 DLSDTSNLTRILR------EVQPDEVYNLGAMSHVAVSFESPEYTAD----VDAMGTLRL 112
Query: 130 SQLAHPLLKSAGNGNIIFISSVA---GVIAIPMC--------SIYASSKVAMNQLTKNLA 178
+ L S+ V IP S YA +K+ +T N
Sbjct: 113 LEAIR-FLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYR 171
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 40.1 bits (93), Expect = 2e-04
Identities = 28/188 (14%), Positives = 54/188 (28%), Gaps = 29/188 (15%)
Query: 14 MTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLK 72
M L+TGG IG AVV + V + N S+ + + D+
Sbjct: 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60
Query: 73 IRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFST-VMTTNFESAYHLSQ 131
A+ ++ E + + +++ A + T ++ T
Sbjct: 61 DSAEITRIFE------QYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKY 114
Query: 132 LAHPLLKSAGNGNIIFISSVAGVIAIPMC---------------------SIYASSKVAM 170
+ N IS+ +P S Y++SK +
Sbjct: 115 WSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASS 174
Query: 171 NQLTKNLA 178
+ L +
Sbjct: 175 DHLVRAWR 182
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Score = 38.2 bits (87), Expect = 5e-04
Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 4/57 (7%)
Query: 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN----QRIQEWKSKGLQV 64
K L+ GGT IG +V + G + R E N Q + +K G ++
Sbjct: 2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKL 58
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.7 bits (86), Expect = 7e-04
Identities = 7/47 (14%), Positives = 13/47 (27%)
Query: 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEW 57
+ + G T G + + G V R+ + L
Sbjct: 1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRP 47
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Score = 37.8 bits (86), Expect = 8e-04
Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 6/74 (8%)
Query: 17 LVTGGTKGIGYAVVEELAAFGAIVHTCSRNET-----ELNQRIQEWKSKGLQ-VSGSVCD 70
L+ G T IG V + G R T E Q ++ +K+ G V GS+ D
Sbjct: 7 LLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDD 66
Query: 71 LKIRAQREKLMETV 84
+ K ++ V
Sbjct: 67 HASLVEAVKNVDVV 80
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.6 bits (86), Expect = 0.001
Identities = 33/180 (18%), Positives = 47/180 (26%), Gaps = 28/180 (15%)
Query: 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGS------VC 69
AL+TG T G + E L G VH R + N E K Q
Sbjct: 4 ALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYG 63
Query: 70 DLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHL 129
DL K++ V L + +F E T + L
Sbjct: 64 DLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYT----------ADVDGVGTLRL 113
Query: 130 SQLAHPLLKSAGNGNIIFISSVA---GVIAIPMC--------SIYASSKVAMNQLTKNLA 178
+ S+ V IP S Y ++K+ + N
Sbjct: 114 LDAVK-TCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFR 172
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 36.9 bits (84), Expect = 0.001
Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Query: 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN-QRIQEWKSKG 61
+ALVTG T G + + L G VH + R++E +G
Sbjct: 2 SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEG 49
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Score = 36.9 bits (84), Expect = 0.002
Identities = 11/59 (18%), Positives = 19/59 (32%)
Query: 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD 70
+ T V G T G +++ AA G V + L + G + +
Sbjct: 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLN 60
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Score = 35.9 bits (81), Expect = 0.003
Identities = 9/59 (15%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Query: 1 MSDFREQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAI--VHTCSRNETELNQRIQEW 57
+S RE + ++ + + G + G +++E+ G V R + ++ +
Sbjct: 3 LSKLRE-DFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKN 60
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.2 bits (83), Expect = 0.003
Identities = 24/178 (13%), Positives = 47/178 (26%), Gaps = 39/178 (21%)
Query: 17 LVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQ 76
L+TGG +G + ++L G V T + ++ W +L
Sbjct: 5 LITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGH------ENFELINHDV 58
Query: 77 REKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPL 136
E L +++ + + A P + + TN ++ LA
Sbjct: 59 VEPLYI--------EVDQIYHLASPASPPN----YMYNPIKTLKTNTIGTLNMLGLAK-- 104
Query: 137 LKSAGNGNIIFISSVA----------------GVIAIPMCSIYASSKVAMNQLTKNLA 178
++ S+ V I + Y K +
Sbjct: 105 ---RVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYM 159
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Score = 35.7 bits (81), Expect = 0.004
Identities = 33/213 (15%), Positives = 64/213 (30%), Gaps = 13/213 (6%)
Query: 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS-KGLQVSGSVCDLK 72
M LVTGG+ IG +L G V + + G + D++
Sbjct: 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60
Query: 73 IRAQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDF-----STVMTTNFESAY 127
A +++ D ++ +I+ AG E+ + E + T+ + A
Sbjct: 61 NEALMTEILH------DHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA 114
Query: 128 HLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIR 187
++ + + P Y SK+ + Q+ +L I
Sbjct: 115 NVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSP-YGKSKLMVEQILTDLQKAQPDWSIA 173
Query: 188 VNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLR 220
+ V P D E + + +
Sbjct: 174 LLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQ 206
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 263 | |||
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 100.0 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 100.0 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 100.0 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 100.0 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 100.0 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 100.0 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 100.0 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 100.0 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 100.0 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 100.0 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 100.0 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 100.0 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 100.0 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 100.0 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 100.0 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 100.0 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 100.0 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 100.0 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 100.0 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 100.0 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 100.0 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 100.0 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 100.0 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 100.0 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 100.0 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 100.0 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 100.0 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 100.0 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 100.0 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 100.0 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 100.0 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 100.0 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 100.0 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 100.0 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 100.0 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 100.0 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 100.0 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 100.0 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 100.0 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 100.0 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 100.0 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 100.0 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 100.0 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 100.0 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 100.0 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 100.0 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 100.0 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 100.0 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 100.0 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 100.0 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 100.0 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 100.0 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 100.0 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 100.0 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 100.0 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 100.0 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 100.0 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 100.0 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 100.0 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 100.0 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 100.0 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 100.0 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 100.0 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 100.0 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 100.0 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.92 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.85 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 99.85 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.84 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.83 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.82 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.82 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.82 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.81 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.81 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.81 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.8 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.8 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.8 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.8 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.79 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.79 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.77 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.76 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.75 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.75 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.73 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.7 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.67 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.53 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.49 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.45 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.37 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.36 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.36 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.32 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 99.16 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 98.31 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 98.28 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 98.22 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 98.21 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 98.19 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 98.16 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 98.03 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 98.02 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 97.99 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 97.96 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 97.96 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 97.92 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 97.87 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.85 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 97.83 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 97.71 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 97.71 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 97.69 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 97.63 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 97.51 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 97.47 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 97.39 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 97.37 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 97.35 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 97.33 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 97.33 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 97.32 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 97.3 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 97.29 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 97.27 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 97.27 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.26 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 97.25 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.24 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 97.23 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 97.21 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 97.21 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 97.19 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 97.19 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 97.18 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 97.15 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 97.15 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 97.15 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 97.13 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 97.13 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 97.08 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 96.96 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 96.9 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 96.89 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 96.88 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 96.88 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 96.86 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 96.85 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 96.83 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 96.81 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 96.8 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 96.8 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 96.78 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 96.72 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 96.68 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 96.67 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 96.58 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 96.56 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 96.54 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 96.53 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 96.41 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 96.39 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 96.29 | |
| d1wy7a1 | 201 | Hypothetical protein PH1948 {Archaeon Pyrococcus h | 96.28 | |
| d1y8ca_ | 246 | Putative methyltransferase CAC2371 {Clostridium ac | 96.27 | |
| d1p9oa_ | 290 | Phosphopantothenoylcysteine synthetase {Human (Hom | 96.19 | |
| d2nxca1 | 254 | PrmA-like protein TTHA0656 (TT0836) {Thermus therm | 96.17 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 96.1 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 96.08 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 95.97 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 95.95 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 95.89 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 95.75 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 95.55 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 95.53 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 95.44 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 95.36 | |
| d1wzna1 | 251 | Hypothetical methyltransferase PH1305 {Archaeon Py | 95.29 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 95.2 | |
| d1ne2a_ | 197 | Hypothetical protein Ta1320 {Archaeon Thermoplasma | 95.16 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 95.16 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 95.15 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 95.12 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 95.03 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 95.01 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 94.92 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 94.86 | |
| d1m6ya2 | 192 | TM0872, methyltransferase domain {Thermotoga marit | 94.86 | |
| d1wxxa2 | 318 | Hypothetical protein TTHA1280, middle and C-termin | 94.75 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 94.71 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 94.53 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 94.5 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 94.47 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 94.45 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 94.41 | |
| d2as0a2 | 324 | Hypothetical protein PH1915, middle and C-terminal | 94.35 | |
| d2b78a2 | 317 | Hypothetical protein SMu776, middle and C-terminal | 94.31 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 93.99 | |
| d1jg1a_ | 215 | Protein-L-isoaspartyl O-methyltransferase {Archaeo | 93.88 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 93.79 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 93.73 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 93.72 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 93.67 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 93.61 | |
| d2bzga1 | 229 | Thiopurine S-methyltransferase {Human (Homo sapien | 93.57 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 93.41 | |
| d2igta1 | 309 | Putative methyltransferase Atu0340 {Agrobacterium | 93.38 | |
| d1l3ia_ | 186 | Precorrin-6Y methyltransferase (CbiT) {Archaeon Me | 93.26 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 93.24 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 93.23 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 93.19 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 93.17 | |
| d2fr1a2 | 209 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 93.16 | |
| d2esra1 | 152 | Putative methyltransferase SPy1538 {Streptococcus | 93.1 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 93.04 | |
| d1ws6a1 | 171 | Methyltransferase TTHA0928 {Thermus thermophilus [ | 92.95 | |
| d2fyta1 | 311 | Protein arginine N-methyltransferase 3, PRMT3 {Hum | 92.84 | |
| d1ve3a1 | 226 | Hypothetical protein PH0226 {Archaeon Pyrococcus h | 92.77 | |
| d1dl5a1 | 213 | Protein-L-isoaspartyl O-methyltransferase {Thermot | 92.65 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 92.65 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 92.6 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 92.55 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 92.42 | |
| d1b26a1 | 234 | Glutamate dehydrogenase {Thermotoga maritima [TaxI | 92.4 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 92.14 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 92.08 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 92.0 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 91.93 | |
| d1iuka_ | 136 | Hypothetical protein TT1466 {Thermus thermophilus | 91.92 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 91.9 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 91.87 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 91.8 | |
| d2gv8a2 | 107 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 91.78 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 91.7 | |
| d1u0sy_ | 118 | CheY protein {Thermotoga maritima [TaxId: 2336]} | 91.7 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 91.52 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 91.44 | |
| d1i1na_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Human ( | 91.4 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 91.23 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 91.17 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 91.15 | |
| d1vbfa_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Sulfolo | 91.13 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 91.09 | |
| d1nv8a_ | 271 | N5-glutamine methyltransferase, HemK {Thermotoga m | 91.04 | |
| d1gtma1 | 239 | Glutamate dehydrogenase {Archaeon Pyrococcus furio | 90.9 | |
| d1s6ya1 | 169 | 6-phospho-beta-glucosidase {Bacillus stearothermop | 90.85 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 90.76 | |
| d1byia_ | 224 | Dethiobiotin synthetase {Escherichia coli [TaxId: | 90.74 | |
| d2i6ga1 | 198 | Putative methyltransferase TehB {Salmonella typhim | 90.74 | |
| d1w4xa2 | 235 | Phenylacetone monooxygenase {Thermobifida fusca [T | 90.35 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 90.31 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 90.2 | |
| d1dusa_ | 194 | Hypothetical protein MJ0882 {Archaeon Methanococcu | 90.11 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 90.09 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 89.99 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 89.77 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 89.77 | |
| d1oria_ | 316 | Protein arginine N-methyltransferase 1, PRMT1 {Rat | 89.74 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 89.7 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 89.67 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 89.3 | |
| d2cvza2 | 156 | Hydroxyisobutyrate dehydrogenase {Thermus thermoph | 89.24 | |
| d2fhpa1 | 182 | Putative methylase EF2452 {Enterococcus faecalis [ | 88.61 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 88.54 | |
| d1ri5a_ | 252 | mRNA cap (Guanine N-7) methyltransferase {Fungus ( | 88.49 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 87.96 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 87.94 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 87.78 | |
| d1sqga2 | 284 | Ribosomal RNA small subunit methyltransferase B, R | 87.77 | |
| d1ihua2 | 279 | Arsenite-translocating ATPase ArsA {Escherichia co | 87.71 | |
| d1wbha1 | 213 | KDPG aldolase {Escherichia coli [TaxId: 562]} | 87.66 | |
| d2b3ta1 | 274 | N5-glutamine methyltransferase, HemK {Escherichia | 87.57 | |
| d1c4oa2 | 174 | Nucleotide excision repair enzyme UvrB {Thermus th | 87.52 | |
| d2gh1a1 | 281 | Methyltransferase BC2162 {Bacillus cereus [TaxId: | 87.31 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 87.04 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 87.0 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 86.91 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 86.81 | |
| d2o14a2 | 208 | Hypothetical protein YxiM {Bacillus subtilis [TaxI | 86.66 | |
| d1g6q1_ | 328 | Arginine methyltransferase, HMT1 {Baker's yeast (S | 86.5 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 86.47 | |
| d1r18a_ | 223 | Protein-L-isoaspartyl O-methyltransferase {Fruit f | 86.4 | |
| d1vl5a_ | 231 | Hypothetical protein BH2331 {Bacillus halodurans [ | 86.32 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 86.28 | |
| d1ccwa_ | 137 | Glutamate mutase, small subunit {Clostridium cochl | 86.25 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 86.12 | |
| d1g3qa_ | 237 | Cell division regulator MinD {Archaeon Pyrococcus | 85.85 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 85.4 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 85.34 | |
| d1xvaa_ | 292 | Glycine N-methyltransferase {Rat (Rattus norvegicu | 85.26 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 85.04 | |
| d2csua3 | 163 | Acetate-CoA ligase alpha chain, AcdA, domains 2 an | 84.97 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 84.73 | |
| d1hyqa_ | 232 | Cell division regulator MinD {Archaeon Archaeoglob | 84.69 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 84.34 | |
| d1peya_ | 119 | Sporulation response regulator Spo0F {Bacillus sub | 83.76 | |
| d1nt2a_ | 209 | Fibrillarin homologue {Archaeon Archaeoglobus fulg | 83.65 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 83.62 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 83.18 | |
| d1wg8a2 | 182 | TM0872, methyltransferase domain {Thermus thermoph | 82.26 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 82.11 | |
| d2fpoa1 | 183 | Methylase YhhF {Escherichia coli [TaxId: 562]} | 81.92 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 81.92 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 81.79 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 81.58 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 81.38 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 80.83 | |
| d1qkia1 | 203 | Glucose 6-phosphate dehydrogenase, N-terminal doma | 80.65 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 80.55 | |
| d1xxla_ | 234 | Hypothetical protein YcgJ {Bacillus subtilis [TaxI | 80.33 | |
| d1jbqa_ | 355 | Cystathionine beta-synthase {Human (Homo sapiens) | 80.18 |
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=100.00 E-value=2.1e-61 Score=399.89 Aligned_cols=254 Identities=55% Similarity=0.933 Sum_probs=239.8
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
+|||+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+.++.++++|++++++++++++++.++
T Consensus 3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 82 (259)
T d2ae2a_ 3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH 82 (259)
T ss_dssp TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999988889999999999999999999999999
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+++++|++|||||+....++.+.+.|+|++.|++|+.++++++++++|+|++++.|+||++||..+..+.|+...|+++|
T Consensus 83 ~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK 162 (259)
T d2ae2a_ 83 FHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATK 162 (259)
T ss_dssp TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred hCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccchHHHH
Confidence 85589999999999988899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
+|+++|+|+++.|++++|||||+|+||+|+|++...........+...++....|++|+++|+||+++++||+|+.++|+
T Consensus 163 aal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~i 242 (259)
T d2ae2a_ 163 GAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYV 242 (259)
T ss_dssp HHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCC
Confidence 99999999999999999999999999999999987766555445555677788999999999999999999999999999
Q ss_pred cCcEEEeCCCcccc
Q 024752 248 TGQVICVDGGYSVT 261 (263)
Q Consensus 248 ~G~~i~~dgG~~~~ 261 (263)
|||.|.+|||++.+
T Consensus 243 tG~~i~VDGG~~a~ 256 (259)
T d2ae2a_ 243 TGQIIYVDGGLMAN 256 (259)
T ss_dssp CSCEEEESTTGGGC
T ss_pred cCcEEEECCCeEee
Confidence 99999999999863
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=1.4e-61 Score=400.77 Aligned_cols=253 Identities=62% Similarity=1.014 Sum_probs=206.3
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
+++||+||++|||||++|||+++|++|+++|++|++++|++++++++.+++...+.++.++.+|++++++++++++++.+
T Consensus 2 ~~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 81 (259)
T d1xq1a_ 2 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSS 81 (259)
T ss_dssp CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999998888899999999999999999999999
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhH
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASS 166 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s 166 (263)
+|++++|++|||||+....++.+.+.++|++.+++|+.++++++|+++|+|++++.|+||++||..+..+.++..+|+++
T Consensus 82 ~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~as 161 (259)
T d1xq1a_ 82 MFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSAT 161 (259)
T ss_dssp HHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHH
T ss_pred HhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccccccccccccc
Confidence 98678999999999999899999999999999999999999999999999999889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
|+|+.+|+|+++.|++++|||||+|+||+|+|++......++ .........|++|+++|+|||++++||+|+.++|
T Consensus 162 Kaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~----~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~ 237 (259)
T d1xq1a_ 162 KGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDE----FKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASY 237 (259)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-----------------------------CCGGGGHHHHHHHTSGGGTT
T ss_pred ccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHH----HHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence 999999999999999999999999999999999987654332 1244556789999999999999999999999999
Q ss_pred ccCcEEEeCCCccccCC
Q 024752 247 VTGQVICVDGGYSVTGF 263 (263)
Q Consensus 247 ~~G~~i~~dgG~~~~~~ 263 (263)
+|||.|.+|||++++|+
T Consensus 238 iTG~~i~vDGG~s~~g~ 254 (259)
T d1xq1a_ 238 ITGQTICVDGGLTVNGF 254 (259)
T ss_dssp CCSCEEECCCCEEETTE
T ss_pred CcCcEEEeCCCEECCCC
Confidence 99999999999999884
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=1.6e-60 Score=392.61 Aligned_cols=249 Identities=36% Similarity=0.574 Sum_probs=230.7
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHh-cCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS-KGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
+||+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+ .+.++.++++|++++++++++++++.++
T Consensus 1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (251)
T d1vl8a_ 1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK 80 (251)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 689999999999999999999999999999999999999999999888754 4778999999999999999999999999
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccc-ccCCCCcchhhH
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGV-IAIPMCSIYASS 166 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~-~~~~~~~~Y~~s 166 (263)
+ +++|+||||||+....++.+.+.++|++.|++|+.++++++|+++|+|++++.|+||+++|..+. .+.++..+|+++
T Consensus 81 ~-g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~as 159 (251)
T d1vl8a_ 81 F-GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAAS 159 (251)
T ss_dssp H-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHH
T ss_pred c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHHH
Confidence 9 89999999999988889999999999999999999999999999999999999999999997764 467788999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
|+|+++|+|+++.|++++|||||+|+||+|+|++.......+.. ...+....|++|+++|+||+++++||+|+.++|
T Consensus 160 Kaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~---~~~~~~~~pl~R~~~pedvA~~v~fL~S~~a~~ 236 (251)
T d1vl8a_ 160 KGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEK---LDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKY 236 (251)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHH---HHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTT
T ss_pred HHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHH---HHHHHhcCCCCCCCCHHHHHHHHHHHhCchhCC
Confidence 99999999999999999999999999999999998766544332 356677899999999999999999999999999
Q ss_pred ccCcEEEeCCCcccc
Q 024752 247 VTGQVICVDGGYSVT 261 (263)
Q Consensus 247 ~~G~~i~~dgG~~~~ 261 (263)
+|||.|.+|||++.+
T Consensus 237 itG~~i~vDGG~ta~ 251 (251)
T d1vl8a_ 237 VTGQIIFVDGGWTAN 251 (251)
T ss_dssp CCSCEEEESTTGGGC
T ss_pred CcCcEEEeCcCeeCc
Confidence 999999999999853
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=1.8e-60 Score=392.58 Aligned_cols=248 Identities=28% Similarity=0.422 Sum_probs=230.5
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
+.-++++||++|||||++|||+++|++|+++|++|++++|+++.++++.+++++.+.++.++.+|++++++++++++++.
T Consensus 3 n~~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~ 82 (251)
T d2c07a1 3 NYYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKIL 82 (251)
T ss_dssp CCCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 45688999999999999999999999999999999999999999999999999888899999999999999999999999
Q ss_pred hhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhh
Q 024752 86 SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYAS 165 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~ 165 (263)
++| +++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++..+|++
T Consensus 83 ~~~-g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~a 161 (251)
T d2c07a1 83 TEH-KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSS 161 (251)
T ss_dssp HHC-SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHH
T ss_pred Hhc-CCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHHH
Confidence 999 8999999999999888999999999999999999999999999999999998999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCC
Q 024752 166 SKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245 (263)
Q Consensus 166 sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~ 245 (263)
||+|+++|+|+++.|++++|||||+|+||+|+|++.....+ +....+....|++|+++|+|+++++.||+|+.++
T Consensus 162 sKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~-----~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~ 236 (251)
T d2c07a1 162 SKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISE-----QIKKNIISNIPAGRMGTPEEVANLACFLSSDKSG 236 (251)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCH-----HHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCH-----HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhC
Confidence 99999999999999999999999999999999999866432 2335667788999999999999999999999999
Q ss_pred CccCcEEEeCCCcc
Q 024752 246 YVTGQVICVDGGYS 259 (263)
Q Consensus 246 ~~~G~~i~~dgG~~ 259 (263)
|+|||.|.+|||++
T Consensus 237 ~itG~~i~vDGG~s 250 (251)
T d2c07a1 237 YINGRVFVIDGGLS 250 (251)
T ss_dssp TCCSCEEEESTTSC
T ss_pred CCcCcEEEECCCcC
Confidence 99999999999986
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.9e-60 Score=391.97 Aligned_cols=250 Identities=33% Similarity=0.484 Sum_probs=232.9
Q ss_pred ccccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHH
Q 024752 5 REQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 5 ~~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 84 (263)
+...|+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++++.+.++.++++|++++++++++++++
T Consensus 3 ~~d~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~ 82 (255)
T d1fmca_ 3 NSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFA 82 (255)
T ss_dssp CGGGGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHH
Confidence 34568899999999999999999999999999999999999999999999999988889999999999999999999999
Q ss_pred HhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchh
Q 024752 85 SSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYA 164 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~ 164 (263)
.+++ +++|++|||||+....++ +.+.++|++.+++|+.++++++|+++|+|+++++++||++||..+..+.++..+|+
T Consensus 83 ~~~~-g~iDilvnnAG~~~~~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~Y~ 160 (255)
T d1fmca_ 83 ISKL-GKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYA 160 (255)
T ss_dssp HHHH-SSCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHH
T ss_pred HHHc-CCCCEeeeCCcCCCCCcc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccccccch
Confidence 9999 899999999999877766 78999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCC
Q 024752 165 SSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244 (263)
Q Consensus 165 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~ 244 (263)
+||+|+.+|+|++|.|++++|||||+|+||+|+|++.......+ ....+....|++|+++|+|||++++||+|+.+
T Consensus 161 asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e----~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s 236 (255)
T d1fmca_ 161 SSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPE----IEQKMLQHTPIRRLGQPQDIANAALFLCSPAA 236 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHH----HHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGG
T ss_pred hHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHH----HHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence 99999999999999999999999999999999999876554322 23556678899999999999999999999999
Q ss_pred CCccCcEEEeCCCccc
Q 024752 245 SYVTGQVICVDGGYSV 260 (263)
Q Consensus 245 ~~~~G~~i~~dgG~~~ 260 (263)
+|+|||.|.+|||+..
T Consensus 237 ~~itG~~i~vDGG~~~ 252 (255)
T d1fmca_ 237 SWVSGQILTVSGGGVQ 252 (255)
T ss_dssp TTCCSCEEEESTTSCC
T ss_pred cCCcCCEEEECcCccc
Confidence 9999999999999853
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=3e-60 Score=389.30 Aligned_cols=242 Identities=31% Similarity=0.457 Sum_probs=227.0
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
||+||+++||||++|||+++|++|+++|++|++++|+++.++++.+++. .++.++.+|++++++++++++++.+++
T Consensus 1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~- 76 (243)
T d1q7ba_ 1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG---ANGKGLMLNVTDPASIESVLEKIRAEF- 76 (243)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG---GGEEEEECCTTCHHHHHHHHHHHHHHT-
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC---CCCcEEEEEecCHHHhhhhhhhhhccc-
Confidence 6899999999999999999999999999999999999999998888774 457889999999999999999999999
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
+++|+||||||.....++.+.+.++|++.|++|+.++++++|+++|+|++++.|+||++||..+..+.++..+|++||+|
T Consensus 77 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaa 156 (243)
T d1q7ba_ 77 GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAG 156 (243)
T ss_dssp CSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred CCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccC
Q 024752 170 MNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTG 249 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G 249 (263)
+++|+|+++.|++++|||||+|+||+++|++......+ .........|++|+++|+|+|+++.||+|+.++|+||
T Consensus 157 l~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~-----~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG 231 (243)
T d1q7ba_ 157 LIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDD-----QRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITG 231 (243)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHH-----HHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhh-----HHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCcC
Confidence 99999999999999999999999999999987665432 2255666789999999999999999999999999999
Q ss_pred cEEEeCCCccc
Q 024752 250 QVICVDGGYSV 260 (263)
Q Consensus 250 ~~i~~dgG~~~ 260 (263)
|.|.+|||+++
T Consensus 232 q~i~vdGG~~~ 242 (243)
T d1q7ba_ 232 ETLHVNGGMYM 242 (243)
T ss_dssp CEEEESTTSSC
T ss_pred CeEEECCCeEe
Confidence 99999999976
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=100.00 E-value=1.8e-59 Score=388.29 Aligned_cols=249 Identities=31% Similarity=0.434 Sum_probs=230.3
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc-hhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE-TELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
.||+||++|||||++|||+++|++|+++|++|++++|+. +.++++.+++++.+.++.++++|++++++++++++++.++
T Consensus 3 ~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~ 82 (261)
T d1geea_ 3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE 82 (261)
T ss_dssp GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 379999999999999999999999999999999999986 4678888889888889999999999999999999999999
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCc-eEEEEccccccccCCCCcchhhH
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNG-NIIFISSVAGVIAIPMCSIYASS 166 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-~iv~vsS~~~~~~~~~~~~Y~~s 166 (263)
+ ++||+||||||+..+.++.+.+.++|++.+++|+.++++++|+++|+|.+++.+ +||++||..+..+.|+..+|++|
T Consensus 83 ~-G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~as 161 (261)
T d1geea_ 83 F-GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAAS 161 (261)
T ss_dssp H-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred h-CCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccccccccC
Confidence 9 899999999999988899999999999999999999999999999999887655 59999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
|+|+++|+|+++.|++++|||||+|+||+|+|++.......+. ....+....|++|+++|+|||++++||+|+.++|
T Consensus 162 Kaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~---~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~ 238 (261)
T d1geea_ 162 KGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPE---QRADVESMIPMGYIGEPEEIAAVAAWLASSEASY 238 (261)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHH---HHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred CccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHH---HHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcC
Confidence 9999999999999999999999999999999999866544332 2355667789999999999999999999999999
Q ss_pred ccCcEEEeCCCcccc
Q 024752 247 VTGQVICVDGGYSVT 261 (263)
Q Consensus 247 ~~G~~i~~dgG~~~~ 261 (263)
+|||+|.+|||+++.
T Consensus 239 itG~~i~vDGG~sl~ 253 (261)
T d1geea_ 239 VTGITLFADGGMTLY 253 (261)
T ss_dssp CCSCEEEESTTGGGC
T ss_pred CcCCeEEECCCeeCC
Confidence 999999999999874
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=100.00 E-value=6.9e-59 Score=384.37 Aligned_cols=255 Identities=61% Similarity=1.013 Sum_probs=232.8
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
+|||+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+..+.++.+|++++++++++++++.++
T Consensus 1 ~f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~ 80 (258)
T d1ae1a_ 1 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV 80 (258)
T ss_dssp CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999998889999999999999999999999999
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+++++|+||||||.....++.+.+.++|++.+++|+.+++++.++++|.|.+++.|+||++||..+..+.|+...|+++|
T Consensus 81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK 160 (258)
T d1ae1a_ 81 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASK 160 (258)
T ss_dssp TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred hCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHHHHH
Confidence 86789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccc-hhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDS-NFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
+|+++|+|.+++|++++|||||+|+||+++|++........ ...+....+....|++|+++|+|||+++.||+|+.++|
T Consensus 161 ~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~pediA~~v~fL~S~~s~~ 240 (258)
T d1ae1a_ 161 GAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASY 240 (258)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCC
Confidence 99999999999999999999999999999999986654432 22344566777899999999999999999999999999
Q ss_pred ccCcEEEeCCCccccC
Q 024752 247 VTGQVICVDGGYSVTG 262 (263)
Q Consensus 247 ~~G~~i~~dgG~~~~~ 262 (263)
+|||.|.+|||++.+|
T Consensus 241 itG~~i~vDGG~s~~g 256 (258)
T d1ae1a_ 241 ITGQIIWADGGFTANG 256 (258)
T ss_dssp CCSCEEEESTTGGGCS
T ss_pred CcCcEEEeCCCeeccC
Confidence 9999999999999987
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=100.00 E-value=3.7e-59 Score=386.01 Aligned_cols=251 Identities=30% Similarity=0.423 Sum_probs=230.3
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc--CCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++... +.++.++++|++++++++++++++.++|
T Consensus 2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 81 (258)
T d1iy8a_ 2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF 81 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh
Confidence 78999999999999999999999999999999999999999998888653 5578999999999999999999999999
Q ss_pred CCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 89 DGKLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 89 ~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
|++|+||||||+..+ .++.+.+.++|++.|++|+.++++++|+++|+|++++.|+||++||..+..+.|+..+|+++|
T Consensus 82 -G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK 160 (258)
T d1iy8a_ 82 -GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAK 160 (258)
T ss_dssp -SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHH
T ss_pred -CCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHHHH
Confidence 899999999998754 578889999999999999999999999999999998899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccccc---chhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCC
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKD---SNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~ 244 (263)
+|+.+|+|+++.|++++|||||+|+||+|+|++....... +...+....+....|++|+++|+|+|++++||+|+.+
T Consensus 161 aal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fL~S~~s 240 (258)
T d1iy8a_ 161 HGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDA 240 (258)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGG
T ss_pred HHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence 9999999999999999999999999999999997654321 2233444667778899999999999999999999999
Q ss_pred CCccCcEEEeCCCccccC
Q 024752 245 SYVTGQVICVDGGYSVTG 262 (263)
Q Consensus 245 ~~~~G~~i~~dgG~~~~~ 262 (263)
+|+|||+|.+|||++..+
T Consensus 241 ~~itG~~i~VDGG~saa~ 258 (258)
T d1iy8a_ 241 SYVNATVVPIDGGQSAAY 258 (258)
T ss_dssp TTCCSCEEEESTTTTTBC
T ss_pred cCCcCceEEcCcchhccC
Confidence 999999999999998653
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=100.00 E-value=4.1e-59 Score=383.53 Aligned_cols=246 Identities=29% Similarity=0.406 Sum_probs=213.7
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
.|+||++|||||++|||+++|++|+++|++|++++|++.+ +....+++.+.++.++.+|++++++++++++++.++|
T Consensus 2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~--~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~- 78 (247)
T d2ew8a1 2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF- 78 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH--HHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHc-
Confidence 4889999999999999999999999999999999998764 3344556677889999999999999999999999999
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
+++|+||||||+....++.+.+.++|++.|++|+.++++++|+++|.|++++.|+||++||..+..+.|+..+|++||+|
T Consensus 79 G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaa 158 (247)
T d2ew8a1 79 GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAA 158 (247)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhhhcc
Confidence 89999999999998899999999999999999999999999999999999989999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccC
Q 024752 170 MNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTG 249 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G 249 (263)
+.+|+|+++.|++++|||||+|+||+|+|++........... .......|++++++|+||+++++||+|+.++|+||
T Consensus 159 l~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~---~~~~~~~~l~r~~~pedvA~~v~fL~S~~s~~itG 235 (247)
T d2ew8a1 159 NIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFD---VLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITG 235 (247)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCC---------------------CTTSSSCSCCCTHHHHHHHHHHTSGGGTTCCS
T ss_pred HHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHH---HHHHHhccCCCCCCHHHHHHHHHHHhCchhcCCcC
Confidence 999999999999999999999999999999986554332221 11222358899999999999999999999999999
Q ss_pred cEEEeCCCcccc
Q 024752 250 QVICVDGGYSVT 261 (263)
Q Consensus 250 ~~i~~dgG~~~~ 261 (263)
|.|.+|||+..+
T Consensus 236 ~~i~vDGG~~~h 247 (247)
T d2ew8a1 236 QTLAVDGGMVRH 247 (247)
T ss_dssp CEEEESSSCCCC
T ss_pred CeEEECCCEecC
Confidence 999999999764
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=100.00 E-value=5.3e-59 Score=386.03 Aligned_cols=249 Identities=29% Similarity=0.420 Sum_probs=220.0
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCC-chhHHHHHHHHHh-cCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN-ETELNQRIQEWKS-KGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~-~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
|+||++|||||++|||+++|++|+++|++|++++|+ .+.++++.+++.+ .+.++.++++|++++++++++++++.++|
T Consensus 2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 81 (260)
T d1x1ta1 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM 81 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 689999999999999999999999999999999997 4667777777754 46789999999999999999999999999
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
|++|+||||||+....++.+.+.++|++.|++|+.++++++++++|+|++++.|+||++||..+..+.|+..+|++||+
T Consensus 82 -G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKa 160 (260)
T d1x1ta1 82 -GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKH 160 (260)
T ss_dssp -SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred -CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhhhhh
Confidence 8999999999999989999999999999999999999999999999999998999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccch-------hHHHHHHhHhcCCCCCCCChhhHHHHHHHHcC
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSN-------FLEHANRMVLRTPMLRPGEPNEVSSVVAFLCL 241 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s 241 (263)
|+.+|+|+++.|++++|||||+|+||+|+|++......... .......+....|++|+++|+|++++++||+|
T Consensus 161 al~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S 240 (260)
T d1x1ta1 161 GVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLAS 240 (260)
T ss_dssp HHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHS
T ss_pred hHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999765432110 01111334567899999999999999999999
Q ss_pred CCCCCccCcEEEeCCCccc
Q 024752 242 SATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 242 ~~~~~~~G~~i~~dgG~~~ 260 (263)
+.++|+|||.|.+|||++.
T Consensus 241 ~~a~~itG~~i~vDGG~ta 259 (260)
T d1x1ta1 241 DAAAQITGTTVSVDGGWTA 259 (260)
T ss_dssp GGGTTCCSCEEEESTTGGG
T ss_pred hhhCCCcCCEEEECcchhc
Confidence 9999999999999999975
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=6.1e-59 Score=385.00 Aligned_cols=246 Identities=30% Similarity=0.485 Sum_probs=229.0
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.+.+.++.++++|++++++++++++++.++| +++
T Consensus 2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~-g~i 80 (257)
T d2rhca1 2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY-GPV 80 (257)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT-CSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHh-CCC
Confidence 8999999999999999999999999999999999999999999999888899999999999999999999999999 899
Q ss_pred cEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHH--HhhCCCceEEEEccccccccCCCCcchhhHHHHH
Q 024752 93 NILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPL--LKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAM 170 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~--~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~ 170 (263)
|+||||||+....++.+.+.++|++.|++|+.++++++|+++|+ |.+++.|+||+++|..+..+.|+..+|++||+|+
T Consensus 81 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~asKaal 160 (257)
T d2rhca1 81 DVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGV 160 (257)
T ss_dssp SEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred CEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHHHHHH
Confidence 99999999998899999999999999999999999999999997 5566779999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEEecCcccCCcccccccc------chhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCC
Q 024752 171 NQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKD------SNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244 (263)
Q Consensus 171 ~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~ 244 (263)
.+|+|+++.|++++|||||+|+||+|+|+|....... ....+...++....|++|+++|+|++++++||+|+.+
T Consensus 161 ~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~~v~fL~S~~s 240 (257)
T d2rhca1 161 VGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGA 240 (257)
T ss_dssp HHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHTSGGG
T ss_pred HHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence 9999999999999999999999999999997654321 1223444667778999999999999999999999999
Q ss_pred CCccCcEEEeCCCcc
Q 024752 245 SYVTGQVICVDGGYS 259 (263)
Q Consensus 245 ~~~~G~~i~~dgG~~ 259 (263)
+|+|||.|.+|||.+
T Consensus 241 ~~itG~~i~vDGG~~ 255 (257)
T d2rhca1 241 AAVTAQALNVCGGLG 255 (257)
T ss_dssp TTCCSCEEEESTTCC
T ss_pred cCCcCceEEECcCcc
Confidence 999999999999975
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=100.00 E-value=1.3e-58 Score=382.66 Aligned_cols=249 Identities=25% Similarity=0.366 Sum_probs=227.1
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
|.|+||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++ +.++.++++|++++++++++++++.+++
T Consensus 1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~---~~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 77 (256)
T d1k2wa_ 1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI---GPAACAIALDVTDQASIDRCVAELLDRW 77 (256)
T ss_dssp CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCceEEEEeeCCCHHHHHHHHHHHHHHh
Confidence 5689999999999999999999999999999999999999988888776 5678999999999999999999999999
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-CCceEEEEccccccccCCCCcchhhHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-GNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+++|+||||||+....++.+.+.++|++.+++|+.|+++++++++|.|.++ +.|+||++||..+..+.++..+|++||
T Consensus 78 -g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK 156 (256)
T d1k2wa_ 78 -GSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATK 156 (256)
T ss_dssp -SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred -CCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhhh
Confidence 899999999999988999999999999999999999999999999986654 579999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccc------hhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcC
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDS------NFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCL 241 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s 241 (263)
+|+++|+++++.|++++|||||+|+||+++|++........ ...+....+....|++|+++|+|||++++||+|
T Consensus 157 aal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v~fL~S 236 (256)
T d1k2wa_ 157 AAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLAT 236 (256)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHHHHHTTS
T ss_pred hHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999976543211 112233556678899999999999999999999
Q ss_pred CCCCCccCcEEEeCCCcccc
Q 024752 242 SATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 242 ~~~~~~~G~~i~~dgG~~~~ 261 (263)
+.++|+|||.|.+|||..++
T Consensus 237 ~~a~~iTG~~i~vDGG~~ms 256 (256)
T d1k2wa_ 237 PEADYIVAQTYNVDGGNWMS 256 (256)
T ss_dssp GGGTTCCSCEEEESTTSSCC
T ss_pred chhCCccCceEEECcchhhC
Confidence 99999999999999998875
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=100.00 E-value=5.9e-59 Score=383.39 Aligned_cols=242 Identities=31% Similarity=0.444 Sum_probs=224.6
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
||+||++|||||++|||+++|++|+++|++|++++|++++++++.+++ +.++.++++|++++++++++++++.++|
T Consensus 2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~- 77 (254)
T d1hdca_ 2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEF- 77 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCceEEEEcccCCHHHHHHHHHHHHHHc-
Confidence 689999999999999999999999999999999999998888777665 4578999999999999999999999999
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
+++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..+.++..+|++||+|
T Consensus 78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaa 157 (254)
T d1hdca_ 78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWG 157 (254)
T ss_dssp SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHHHHH
Confidence 89999999999998899999999999999999999999999999999999989999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCC-ChhhHHHHHHHHcCCCCCCcc
Q 024752 170 MNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPG-EPNEVSSVVAFLCLSATSYVT 248 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~va~~~~~l~s~~~~~~~ 248 (263)
+.+|+|+++.|++++|||||+|+||+|+|++......... .......|++|++ .|+||+++++||+|+.++|+|
T Consensus 158 l~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~~-----~~~~~~~pl~R~g~~PedvA~~v~fL~S~~a~~it 232 (254)
T d1hdca_ 158 VRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQG-----EGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVT 232 (254)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCS-----TTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHHH-----HHHHhCCCCCCCCCCHHHHHHHHHHHhchhhCCCC
Confidence 9999999999999999999999999999999866543321 3344567999987 699999999999999999999
Q ss_pred CcEEEeCCCccc
Q 024752 249 GQVICVDGGYSV 260 (263)
Q Consensus 249 G~~i~~dgG~~~ 260 (263)
||.|.+|||++.
T Consensus 233 G~~i~vDGG~t~ 244 (254)
T d1hdca_ 233 GAELAVDGGWTT 244 (254)
T ss_dssp SCEEEESTTTTT
T ss_pred CceEEeCCCccC
Confidence 999999999975
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=100.00 E-value=3.1e-58 Score=380.21 Aligned_cols=247 Identities=28% Similarity=0.372 Sum_probs=227.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
|++|||||++|||+++|++|+++|++|++++|++++++++.+++++.+.++.++++|++++++++++++++.++| |++|
T Consensus 2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD 80 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL-GGFD 80 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT-TCCC
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh-CCcc
Confidence 788999999999999999999999999999999999999999999888899999999999999999999999999 8999
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccccccccCCCCcchhhHHHHHHH
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSVAGVIAIPMCSIYASSKVAMNQ 172 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~ 172 (263)
+||||||+....++.+.+.++|++.+++|+.|+++++|+++|+|.+++ .++||++||..+..+.|+...|++||+|+++
T Consensus 81 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~ 160 (255)
T d1gega_ 81 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRG 160 (255)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred EEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHHHh
Confidence 999999999888999999999999999999999999999999877654 6889999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEEecCcccCCccccccccc------hhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 173 LTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDS------NFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 173 ~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
|+|+++.|++++|||||+|+||+++|++........ ...+....+....|++|+++|+|||++++||+|+.++|
T Consensus 161 ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~ 240 (255)
T d1gega_ 161 LTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDY 240 (255)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred hHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence 999999999999999999999999999976543221 12223355667889999999999999999999999999
Q ss_pred ccCcEEEeCCCcccc
Q 024752 247 VTGQVICVDGGYSVT 261 (263)
Q Consensus 247 ~~G~~i~~dgG~~~~ 261 (263)
+|||.|.+|||+.++
T Consensus 241 itG~~i~vDGG~~~n 255 (255)
T d1gega_ 241 MTGQSLLIDGGMVFN 255 (255)
T ss_dssp CCSCEEEESSSSSCC
T ss_pred ccCcEEEecCCEEeC
Confidence 999999999999764
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=3.4e-58 Score=377.90 Aligned_cols=244 Identities=30% Similarity=0.420 Sum_probs=219.3
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
|+||++|||||++|||+++|++|+++|++|++++|+++..+ ..+++ ...++++|++++++++++++++.++| +
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~-G 75 (248)
T d2d1ya1 3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAI-----GGAFFQVDLEDERERVRFVEEAAYAL-G 75 (248)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHH-----TCEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHc-----CCeEEEEeCCCHHHHHHHHHHHHHhc-C
Confidence 78999999999999999999999999999999999987643 33333 24567999999999999999999999 8
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHH
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAM 170 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~ 170 (263)
+||+||||||+..+.++.+.+.|+|++.|++|+.++++++|+++|+|++++.|+||+++|..+..+.++..+|+++|+|+
T Consensus 76 ~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal 155 (248)
T d2d1ya1 76 RVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGL 155 (248)
T ss_dssp CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHH
T ss_pred CCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999899999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEEecCcccCCccccccccch-hHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccC
Q 024752 171 NQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSN-FLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTG 249 (263)
Q Consensus 171 ~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G 249 (263)
++|+|+++.|++++|||||+|+||+++|++......... ..+....+....|++|+++|+|+++++.||+|+.++|+||
T Consensus 156 ~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~itG 235 (248)
T d2d1ya1 156 VNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITG 235 (248)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCC
Confidence 999999999999999999999999999998765433221 1222345566789999999999999999999999999999
Q ss_pred cEEEeCCCcccc
Q 024752 250 QVICVDGGYSVT 261 (263)
Q Consensus 250 ~~i~~dgG~~~~ 261 (263)
|.|.+|||++.+
T Consensus 236 ~~i~vDGG~tas 247 (248)
T d2d1ya1 236 AILPVDGGMTAS 247 (248)
T ss_dssp CEEEESTTGGGB
T ss_pred cEEEcCcCcccc
Confidence 999999999875
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=4.4e-58 Score=376.11 Aligned_cols=240 Identities=28% Similarity=0.396 Sum_probs=220.6
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
|+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++ ++.++.||++++++++++++++.+++
T Consensus 1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~ 75 (242)
T d1ulsa_ 1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-----GAHPVVMDVADPASVERGFAEALAHL 75 (242)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHHHHhc
Confidence 6799999999999999999999999999999999999998888776654 46788999999999999999999999
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+++|+||||||+..+.++.+.+.++|++.|++|+.++++++|+++|.|++++.++++++|| .+..+.++..+|++||+
T Consensus 76 -g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss-~~~~~~~~~~~Y~asKa 153 (242)
T d1ulsa_ 76 -GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTAS-RVYLGNLGQANYAASMA 153 (242)
T ss_dssp -SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECC-GGGGCCTTCHHHHHHHH
T ss_pred -CCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecc-ccccCCCCCcchHHHHH
Confidence 8999999999999889999999999999999999999999999999999988888888777 46778889999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCcc
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~ 248 (263)
|+++|+|+++.|++++|||||+|+||+|+|++.....+ +...+.....|++|+++|+|+++++.||+|+.++|+|
T Consensus 154 al~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~-----~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~it 228 (242)
T d1ulsa_ 154 GVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPE-----KVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFIT 228 (242)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCH-----HHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCH-----HHHHHHHhcCCCCCCCCHHHHHHHHHHHhchhhCCCC
Confidence 99999999999999999999999999999999865432 2235566788999999999999999999999999999
Q ss_pred CcEEEeCCCccc
Q 024752 249 GQVICVDGGYSV 260 (263)
Q Consensus 249 G~~i~~dgG~~~ 260 (263)
||.|.+|||+++
T Consensus 229 G~~i~vDGG~t~ 240 (242)
T d1ulsa_ 229 GQVLFVDGGRTI 240 (242)
T ss_dssp SCEEEESTTTTT
T ss_pred CcEEEECCCccC
Confidence 999999999986
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=100.00 E-value=2.8e-58 Score=381.44 Aligned_cols=246 Identities=29% Similarity=0.427 Sum_probs=227.9
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++++.+.++.++++|++++++++++++++.++| +
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g 81 (260)
T d1zema1 3 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF-G 81 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence 789999999999999999999999999999999999999999999999888899999999999999999999999999 8
Q ss_pred CccEEEeCCCCCCC-CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHH
Q 024752 91 KLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 91 ~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
++|++|||||.... .++.+.+.++|++.|++|+.++++++++++|.|.+++.|+||++||..+..+.|+..+|++||+|
T Consensus 82 ~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaa 161 (260)
T d1zema1 82 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGA 161 (260)
T ss_dssp CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHHH
T ss_pred CCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHHHHH
Confidence 99999999998755 67899999999999999999999999999999999889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEEecCcccCCccccccc-----------cchhHHHHHHhHhcCCCCCCCChhhHHHHHHH
Q 024752 170 MNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEK-----------DSNFLEHANRMVLRTPMLRPGEPNEVSSVVAF 238 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ 238 (263)
+++|+|+++.|++++|||||+|+||+|+|++...... ..........+....|++|+++|+|++++++|
T Consensus 162 l~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~f 241 (260)
T d1zema1 162 IIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAF 241 (260)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHHH
T ss_pred HHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 9999999999999999999999999999998643211 11122334566778899999999999999999
Q ss_pred HcCCCCCCccCcEEEeCCC
Q 024752 239 LCLSATSYVTGQVICVDGG 257 (263)
Q Consensus 239 l~s~~~~~~~G~~i~~dgG 257 (263)
|+|+.++|+|||.|.+|||
T Consensus 242 L~S~~s~~itG~~i~VDGG 260 (260)
T d1zema1 242 LLGDDSSFMTGVNLPIAGG 260 (260)
T ss_dssp HHSGGGTTCCSCEEEESCC
T ss_pred HhCchhcCccCCeEEeCCC
Confidence 9999999999999999998
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=100.00 E-value=1.7e-58 Score=378.95 Aligned_cols=241 Identities=27% Similarity=0.411 Sum_probs=225.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEe-eCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTC-SRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
+++|||||++|||+++|++|+++|++|++. .|+++.++++.+++++.+.++.++++|++++++++++++++.+++ +++
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i 80 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW-GTI 80 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS-SCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHc-CCC
Confidence 689999999999999999999999999886 567888899999998888899999999999999999999999999 899
Q ss_pred cEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHHH
Q 024752 93 NILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQ 172 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~ 172 (263)
|+||||||.....++.+.+.++|++.+++|+.++++++|+++|+|++++.|+||++||..+..+.++..+|++||+|+.+
T Consensus 81 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~ 160 (244)
T d1edoa_ 81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIG 160 (244)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHH
T ss_pred CccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999889999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHc-CCCCCCccCcE
Q 024752 173 LTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC-LSATSYVTGQV 251 (263)
Q Consensus 173 ~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~-s~~~~~~~G~~ 251 (263)
|+|+++.|++++|||||+|+||+++|++.....+ +..+......|++|+++|+|+++++.||+ |+.++|+|||.
T Consensus 161 ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~-----~~~~~~~~~~pl~R~~~p~dvA~~v~fLa~S~~a~~itG~~ 235 (244)
T d1edoa_ 161 FSKTAAREGASRNINVNVVCPGFIASDMTAKLGE-----DMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQA 235 (244)
T ss_dssp HHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCH-----HHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCE
T ss_pred ChHHHHHHHhhhCcEEEEEecceeccHHHHHhhH-----HHHHHHHhcCCCCCCcCHHHHHHHHHHHHCCchhcCCcCCe
Confidence 9999999999999999999999999998766432 22355667889999999999999999997 89999999999
Q ss_pred EEeCCCccc
Q 024752 252 ICVDGGYSV 260 (263)
Q Consensus 252 i~~dgG~~~ 260 (263)
|.+|||+++
T Consensus 236 i~vdGG~si 244 (244)
T d1edoa_ 236 FTIDGGIAI 244 (244)
T ss_dssp EEESTTTTC
T ss_pred EEeCCCeeC
Confidence 999999875
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=3.7e-58 Score=376.47 Aligned_cols=237 Identities=32% Similarity=0.463 Sum_probs=222.0
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
.|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++. .++.++++|++++++++++++++.+++
T Consensus 3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~- 78 (244)
T d1nffa_ 3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA---DAARYVHLDVTQPAQWKAAVDTAVTAF- 78 (244)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG---GGEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh---CcceEEEeecCCHHHHHHHHHHHHHHh-
Confidence 3789999999999999999999999999999999999999888887763 468889999999999999999999999
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
+++|++|||||.....++.+.+.++|++.|++|+.++++++|+++|.|+++++|+||++||..+..+.++..+|+++|+|
T Consensus 79 g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaa 158 (244)
T d1nffa_ 79 GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFA 158 (244)
T ss_dssp SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred CCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhHHHH
Confidence 89999999999998899999999999999999999999999999999999989999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccC
Q 024752 170 MNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTG 249 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G 249 (263)
+++|+|+++.|++++|||||+|+||+++|++.....+. ..+.|++|+++|+|+|++++||+|+.++|+||
T Consensus 159 l~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~----------~~~~pl~R~~~p~diA~~v~fL~s~~s~~itG 228 (244)
T d1nffa_ 159 VRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED----------IFQTALGRAAEPVEVSNLVVYLASDESSYSTG 228 (244)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTT----------CSCCSSSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHH----------HHhccccCCCCHHHHHHHHHHHhChhhCCCcC
Confidence 99999999999999999999999999999987554322 23579999999999999999999999999999
Q ss_pred cEEEeCCCccc
Q 024752 250 QVICVDGGYSV 260 (263)
Q Consensus 250 ~~i~~dgG~~~ 260 (263)
|+|.+|||+..
T Consensus 229 ~~i~vDGG~~a 239 (244)
T d1nffa_ 229 AEFVVDGGTVA 239 (244)
T ss_dssp CEEEESTTGGG
T ss_pred CEEEECCCeec
Confidence 99999999964
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=100.00 E-value=4.8e-58 Score=377.99 Aligned_cols=244 Identities=30% Similarity=0.453 Sum_probs=224.8
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.. +.++.++.+|++++++++++++++.++| |
T Consensus 4 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G 81 (251)
T d1zk4a1 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT-PDQIQFFQHDSSDEDGWTKLFDATEKAF-G 81 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC-CCcEEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence 8899999999999999999999999999999999999999999888754 4578999999999999999999999999 8
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCC-ceEEEEccccccccCCCCcchhhHHHH
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGN-GNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
++|+||||||+....++.+.+.++|++.|++|+.++++++++++|+|++++. ++||++||..+..+.|+..+|+++|+|
T Consensus 82 ~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asKaa 161 (251)
T d1zk4a1 82 PVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGA 161 (251)
T ss_dssp SCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998775 599999999999999999999999999
Q ss_pred HHHHHHHHHHH--HccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 170 MNQLTKNLACE--WAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 170 ~~~~~~~~a~e--~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
+.+|+++++.| ++++|||||+|+||+|+|++.......+ .........|++|+++|+||+++++||+|+.++|+
T Consensus 162 l~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~----~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~i 237 (251)
T d1zk4a1 162 VRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAE----EAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFA 237 (251)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHH----HHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHH----HHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhCCC
Confidence 99999999998 5689999999999999999976654322 12334557899999999999999999999999999
Q ss_pred cCcEEEeCCCccc
Q 024752 248 TGQVICVDGGYSV 260 (263)
Q Consensus 248 ~G~~i~~dgG~~~ 260 (263)
|||.|.+|||++.
T Consensus 238 tG~~i~vDGG~ta 250 (251)
T d1zk4a1 238 TGSEFVVDGGYTA 250 (251)
T ss_dssp CSCEEEESTTGGG
T ss_pred cCcEEEECccccc
Confidence 9999999999974
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=100.00 E-value=5.2e-58 Score=378.07 Aligned_cols=248 Identities=30% Similarity=0.368 Sum_probs=226.3
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++ +.++.++++|++++++++++++++.+++ +
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-g 79 (253)
T d1hxha_ 4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRL-G 79 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHH-C
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCCeEEEEeecCCHHHHHHHHHHHHHHh-C
Confidence 89999999999999999999999999999999999999998888776 4568899999999999999999999999 8
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHH
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAM 170 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~ 170 (263)
++|+||||||+..+.++.+.+.++|++.|++|+.++++++++++|+|+++ +|+||++||..+..+.++..+|++||+|+
T Consensus 80 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~G~Iv~isS~~~~~~~~~~~~Y~asKaal 158 (253)
T d1hxha_ 80 TLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET-GGSIINMASVSSWLPIEQYAGYSASKAAV 158 (253)
T ss_dssp SCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred CCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc-CCceecccchhhhcCccccccccchhHHH
Confidence 99999999999988899999999999999999999999999999999765 59999999999999999999999999999
Q ss_pred HHHHHHHHHHHccC--CcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCcc
Q 024752 171 NQLTKNLACEWAKD--KIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248 (263)
Q Consensus 171 ~~~~~~~a~e~~~~--gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~ 248 (263)
.+|+|+++.|++++ |||||+|+||+|+|++.....++....+.........|++++.+|+|+|++++||+|+.++|+|
T Consensus 159 ~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~it 238 (253)
T d1hxha_ 159 SALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMS 238 (253)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHHHHHHHHHHHhChhhCCCc
Confidence 99999999999874 5999999999999999866554443333334444456788999999999999999999999999
Q ss_pred CcEEEeCCCccccCC
Q 024752 249 GQVICVDGGYSVTGF 263 (263)
Q Consensus 249 G~~i~~dgG~~~~~~ 263 (263)
||.|.+|||+.-.||
T Consensus 239 G~~i~VDGG~~~~g~ 253 (253)
T d1hxha_ 239 GSELHADNSILGMGL 253 (253)
T ss_dssp SCEEEESSSCTTTTC
T ss_pred CcEEEECccHhhCcC
Confidence 999999999988875
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=7.8e-58 Score=373.35 Aligned_cols=236 Identities=31% Similarity=0.451 Sum_probs=210.0
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
+.+++||++|||||++|||+++|++|+++|++|++++|+.+.. .++..+++|++++++++++++++.++
T Consensus 2 ~psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-----------~~~~~~~~Dv~~~~~v~~~~~~~~~~ 70 (237)
T d1uzma1 2 KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP-----------KGLFGVEVDVTDSDAVDRAFTAVEEH 70 (237)
T ss_dssp CCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC-----------TTSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh-----------cCceEEEEecCCHHHHHHHHHHHHHh
Confidence 5689999999999999999999999999999999999997643 34678999999999999999999999
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+ +++|+||||||+....++.+.+.|+|++.+++|+.++++++|+++|+|++++.|+||++||..+..+.++..+|++||
T Consensus 71 ~-g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK 149 (237)
T d1uzma1 71 Q-GPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASK 149 (237)
T ss_dssp H-SSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHH
T ss_pred c-CCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHHHHH
Confidence 9 899999999999988999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
+|+++|+|+++.|++++|||||+|+||+++|++.....+ . .........|++|+++|||+|+++.||+|+.++|+
T Consensus 150 aal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~--~---~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~i 224 (237)
T d1uzma1 150 AGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDE--R---IQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYI 224 (237)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCH--H---HHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCH--H---HHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCC
Confidence 999999999999999999999999999999999865432 1 22455667899999999999999999999999999
Q ss_pred cCcEEEeCCCccc
Q 024752 248 TGQVICVDGGYSV 260 (263)
Q Consensus 248 ~G~~i~~dgG~~~ 260 (263)
|||.|.+|||+++
T Consensus 225 tG~~i~vdGG~~m 237 (237)
T d1uzma1 225 SGAVIPVDGGMGM 237 (237)
T ss_dssp CSCEEEESTTTTC
T ss_pred cCCeEEECCCCCC
Confidence 9999999999875
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=100.00 E-value=6.4e-57 Score=375.02 Aligned_cols=251 Identities=27% Similarity=0.382 Sum_probs=223.7
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
.|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++... ..+.++.||++++++++++++++.++|
T Consensus 3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~- 80 (268)
T d2bgka1 3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP-DVISFVHCDVTKDEDVRNLVDTTIAKH- 80 (268)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCC-CceEEEEccCCCHHHHHHHHHHHHHHc-
Confidence 489999999999999999999999999999999999999999999988654 447788999999999999999999999
Q ss_pred CCccEEEeCCCCCCCC--CCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCC-cchhhH
Q 024752 90 GKLNILINNAGTFIPK--ETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMC-SIYASS 166 (263)
Q Consensus 90 ~~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~-~~Y~~s 166 (263)
+++|++|||||+.... .+.+.+.++|++.+++|+.++++++|+++|+|.+++.|+||+++|..+..+.++. ..|++|
T Consensus 81 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~as 160 (268)
T d2bgka1 81 GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTAT 160 (268)
T ss_dssp SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHH
T ss_pred CCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccchh
Confidence 8999999999987654 4778999999999999999999999999999999989999999999998876654 489999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
|+|+++|+|+++.|++++|||||+|+||+|+|++.......+.............|.+++++|+|||++++||+|+.++|
T Consensus 161 Kaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~ 240 (268)
T d2bgka1 161 KHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKY 240 (268)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHHHHHHHHHHhChhhCC
Confidence 99999999999999999999999999999999998776544332221122233457889999999999999999999999
Q ss_pred ccCcEEEeCCCccccC
Q 024752 247 VTGQVICVDGGYSVTG 262 (263)
Q Consensus 247 ~~G~~i~~dgG~~~~~ 262 (263)
+|||.|.+|||++.+.
T Consensus 241 itGq~i~VDGG~t~~~ 256 (268)
T d2bgka1 241 VSGLNLVIDGGYTRTN 256 (268)
T ss_dssp CCSCEEEESTTGGGCC
T ss_pred ccCceEEECcCcccCC
Confidence 9999999999998764
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-57 Score=373.10 Aligned_cols=244 Identities=30% Similarity=0.476 Sum_probs=220.8
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
.|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++ .++.++.+|++++++++++++++.++|
T Consensus 3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~----~~~~~~~~Dvs~~~~v~~~~~~~~~~~- 77 (250)
T d1ydea1 3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----PGAVFILCDVTQEDDVKTLVSETIRRF- 77 (250)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----TTEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----CCCeEEEccCCCHHHHHHHHHHHHHhc-
Confidence 478999999999999999999999999999999999998888777664 457889999999999999999999999
Q ss_pred CCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 90 GKLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 90 ~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+++|+||||||+... .++.+.+.++|++.+++|+.++++++|+++|+|+++ +|+||++||..+..+.++..+|+++|+
T Consensus 78 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~Ii~isS~~~~~~~~~~~~Y~asKa 156 (250)
T d1ydea1 78 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVATKG 156 (250)
T ss_dssp SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred CCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC-CCCCcccccccccccccCcchhHHHHh
Confidence 899999999997754 567889999999999999999999999999999876 489999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccccc-chhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKD-SNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
|+.+|+|+++.|++++|||||+|+||+|+|++....... +...+...+.....|++|+++|+|++++++||+|+ ++|+
T Consensus 157 al~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eva~~v~fL~Sd-a~~i 235 (250)
T d1ydea1 157 AVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANFC 235 (250)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHH-CTTC
T ss_pred hHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc-cCCC
Confidence 999999999999999999999999999999998665432 22233345556678999999999999999999997 7899
Q ss_pred cCcEEEeCCCccc
Q 024752 248 TGQVICVDGGYSV 260 (263)
Q Consensus 248 ~G~~i~~dgG~~~ 260 (263)
|||.|.+|||+++
T Consensus 236 tG~~i~vDGG~~l 248 (250)
T d1ydea1 236 TGIELLVTGGAEL 248 (250)
T ss_dssp CSCEEEESTTTTS
T ss_pred cCCeEEECCCccc
Confidence 9999999999987
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2e-57 Score=372.22 Aligned_cols=241 Identities=32% Similarity=0.443 Sum_probs=219.0
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
|||+||++|||||++|||+++|++|+++|++|++++|++++++++.+++ ..+.++.+|++++++++++++ ++
T Consensus 1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~----~~ 72 (242)
T d1cyda_ 1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----PGIEPVCVDLGDWDATEKALG----GI 72 (242)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHT----TC
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----CCCeEEEEeCCCHHHHHHHHH----Hc
Confidence 6899999999999999999999999999999999999999888877665 347788999999998877654 56
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhh-CCCceEEEEccccccccCCCCcchhhHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKS-AGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+++|+||||||+....++.+.+.++|++.|++|+.++++++|+++|.|.+ +.+|+||+++|..+..+.|+..+|+++|
T Consensus 73 -g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK 151 (242)
T d1cyda_ 73 -GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTK 151 (242)
T ss_dssp -CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred -CCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchH
Confidence 89999999999998889999999999999999999999999999998654 4578999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
+|+.+|+|+++.|++++|||||+|+||+++|++.......+... .......|++|+++|+|+++++.||+|+.++|+
T Consensus 152 aal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~---~~~~~~~pl~R~~~peeva~~v~fL~S~~s~~i 228 (242)
T d1cyda_ 152 GAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFA---RKLKERHPLRKFAEVEDVVNSILFLLSDRSAST 228 (242)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHH---HHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHH---HHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCc
Confidence 99999999999999999999999999999999987765544333 556667899999999999999999999999999
Q ss_pred cCcEEEeCCCcccc
Q 024752 248 TGQVICVDGGYSVT 261 (263)
Q Consensus 248 ~G~~i~~dgG~~~~ 261 (263)
|||.|.+|||++-+
T Consensus 229 tG~~i~vDGG~~as 242 (242)
T d1cyda_ 229 SGGGILVDAGYLAS 242 (242)
T ss_dssp CSSEEEESTTGGGC
T ss_pred CCceEEeCcchhcc
Confidence 99999999998753
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-56 Score=368.06 Aligned_cols=240 Identities=31% Similarity=0.409 Sum_probs=217.9
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
.+.|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++. .+.++.+|++|+++++++++ +
T Consensus 2 ~~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~----~ 73 (244)
T d1pr9a_ 2 ELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----GIEPVCVDLGDWEATERALG----S 73 (244)
T ss_dssp CCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHT----T
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC----CCeEEEEeCCCHHHHHHHHH----H
Confidence 356899999999999999999999999999999999999999888877653 46788999999999877664 4
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHh-hCCCceEEEEccccccccCCCCcchhhH
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLK-SAGNGNIIFISSVAGVIAIPMCSIYASS 166 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~vsS~~~~~~~~~~~~Y~~s 166 (263)
+ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|. +++.|+||++||..+..+.|+...|++|
T Consensus 74 ~-g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~as 152 (244)
T d1pr9a_ 74 V-GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCST 152 (244)
T ss_dssp C-CCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred h-CCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhhh
Confidence 5 8999999999999889999999999999999999999999999999754 5567999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
|+|+++|+|+++.|++++|||||+|+||+|+|++......+... ...+....|++|+++|+|||+++.||+|+.++|
T Consensus 153 Kaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~---~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~ 229 (244)
T d1pr9a_ 153 KGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHK---AKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGM 229 (244)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHH---HHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHH---HHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence 99999999999999999999999999999999998765544332 255667889999999999999999999999999
Q ss_pred ccCcEEEeCCCcc
Q 024752 247 VTGQVICVDGGYS 259 (263)
Q Consensus 247 ~~G~~i~~dgG~~ 259 (263)
+|||.|.+|||++
T Consensus 230 itG~~i~vDGG~~ 242 (244)
T d1pr9a_ 230 TTGSTLPVEGGFW 242 (244)
T ss_dssp CCSCEEEESTTGG
T ss_pred cCCcEEEECccHh
Confidence 9999999999986
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=2.3e-56 Score=370.85 Aligned_cols=249 Identities=32% Similarity=0.494 Sum_probs=210.5
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcC---CceEEEeccCCCHHHHHHHHHHHHh
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG---LQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
.|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+ .++.++++|++++++++++++++.+
T Consensus 2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (264)
T d1spxa_ 2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG 81 (264)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence 3789999999999999999999999999999999999999999999998754 3589999999999999999999999
Q ss_pred hcCCCccEEEeCCCCCCCC----CCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccc-ccccCCCCc
Q 024752 87 QFDGKLNILINNAGTFIPK----ETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVA-GVIAIPMCS 161 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~----~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~-~~~~~~~~~ 161 (263)
+| +++|++|||||+..+. ++.+.+.|+|++.|++|+.++++++++++|+|++++ +++|+++|.. +..+.|+..
T Consensus 82 ~~-g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~~~~~~~ 159 (264)
T d1spxa_ 82 KF-GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFP 159 (264)
T ss_dssp HH-SCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSH
T ss_pred Hh-CCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-CcceeeeeeccccccCCCch
Confidence 99 8999999999987543 355678999999999999999999999999998875 5666666554 577889999
Q ss_pred chhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccc----hhHHHHHHhHhcCCCCCCCChhhHHHHHH
Q 024752 162 IYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDS----NFLEHANRMVLRTPMLRPGEPNEVSSVVA 237 (263)
Q Consensus 162 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~va~~~~ 237 (263)
+|++||+|+++|+|+++.|++++|||||+|+||+|+|++.......+ .............|++|+++|+|||++++
T Consensus 160 ~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~ 239 (264)
T d1spxa_ 160 YYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIA 239 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHH
T ss_pred hhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 99999999999999999999999999999999999999986653322 22233355566789999999999999999
Q ss_pred HHcCC-CCCCccCcEEEeCCCccc
Q 024752 238 FLCLS-ATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 238 ~l~s~-~~~~~~G~~i~~dgG~~~ 260 (263)
||+|+ .++|+|||.|.+|||+++
T Consensus 240 fL~S~~~s~~itG~~i~vDGG~sl 263 (264)
T d1spxa_ 240 FLADRKTSSYIIGHQLVVDGGSSL 263 (264)
T ss_dssp HHHCHHHHTTCCSCEEEESTTGGG
T ss_pred HHhCCcccCCccCceEEeCCChhh
Confidence 99995 589999999999999986
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=3.9e-56 Score=370.91 Aligned_cols=251 Identities=27% Similarity=0.406 Sum_probs=221.2
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcC---CceEEEeccCCCHHHHHHHHHHHHh
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG---LQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
.|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+ .++.++++|++++++++++++++.+
T Consensus 2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~ 81 (272)
T d1xkqa_ 2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK 81 (272)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 4899999999999999999999999999999999999999999999998753 4689999999999999999999999
Q ss_pred hcCCCccEEEeCCCCCCCCCC----CCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcc
Q 024752 87 QFDGKLNILINNAGTFIPKET----TEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSI 162 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~ 162 (263)
+| +++|++|||||...+.++ .+.+.++|++.+++|+.++++++++++|+|++++++.|+++||.++..+.++...
T Consensus 82 ~~-g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~~~~ 160 (272)
T d1xkqa_ 82 QF-GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLY 160 (272)
T ss_dssp HH-SCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSHH
T ss_pred Hh-CCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCCcch
Confidence 99 899999999999876554 3567889999999999999999999999999875555555555677889999999
Q ss_pred hhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchh----HHHHHHhHhcCCCCCCCChhhHHHHHHH
Q 024752 163 YASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNF----LEHANRMVLRTPMLRPGEPNEVSSVVAF 238 (263)
Q Consensus 163 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~va~~~~~ 238 (263)
|+++|+|+.+|+|+++.|++++|||||+|+||+|+|++.......+.. .+.........|++|+++|+|||++++|
T Consensus 161 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pediA~~v~f 240 (272)
T d1xkqa_ 161 YAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILF 240 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCCCCcCHHHHHHHHHH
Confidence 999999999999999999999999999999999999998765443322 2223444567899999999999999999
Q ss_pred HcCCC-CCCccCcEEEeCCCcccc
Q 024752 239 LCLSA-TSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 239 l~s~~-~~~~~G~~i~~dgG~~~~ 261 (263)
|+|++ +.|+|||.|.+|||+++.
T Consensus 241 L~S~~as~~iTG~~i~vDGG~~l~ 264 (272)
T d1xkqa_ 241 LADRNLSFYILGQSIVADGGTSLV 264 (272)
T ss_dssp HHCHHHHTTCCSCEEEESTTGGGC
T ss_pred HhCcchhCCccCeEEEeCcCHHHh
Confidence 99965 679999999999999874
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=5.2e-56 Score=370.41 Aligned_cols=250 Identities=26% Similarity=0.412 Sum_probs=224.6
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcC---CceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG---LQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
|+||+++||||++|||+++|++|+++|++|++++|++++++++.+++.+.+ .++.++.+|++++++++++++++.++
T Consensus 2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (274)
T d1xhla_ 2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK 81 (274)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence 789999999999999999999999999999999999999999999998754 36899999999999999999999999
Q ss_pred cCCCccEEEeCCCCCCCC--CCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhh
Q 024752 88 FDGKLNILINNAGTFIPK--ETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYAS 165 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~ 165 (263)
| |++|++|||||..... ...+.+.|+|++.+++|+.++++++|+++|+|+++++++|+++||.++..+.++..+|++
T Consensus 82 ~-G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y~a 160 (274)
T d1xhla_ 82 F-GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYAC 160 (274)
T ss_dssp H-SCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHHH
T ss_pred c-CCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCceehh
Confidence 9 8999999999987554 345578899999999999999999999999999988899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchh----HHHHHHhHhcCCCCCCCChhhHHHHHHHHcC
Q 024752 166 SKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNF----LEHANRMVLRTPMLRPGEPNEVSSVVAFLCL 241 (263)
Q Consensus 166 sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s 241 (263)
+|+|+.+|+|++|.|++++|||||+|+||+|+|++.......+.. .+.........|++|+++|+|||++++||+|
T Consensus 161 sKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pediA~~v~fL~S 240 (274)
T d1xhla_ 161 AKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLAD 240 (274)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHC
T ss_pred hhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999987665433222 2222334456899999999999999999999
Q ss_pred C-CCCCccCcEEEeCCCcccc
Q 024752 242 S-ATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 242 ~-~~~~~~G~~i~~dgG~~~~ 261 (263)
+ .++|+|||.|.+|||+++.
T Consensus 241 ~d~s~~itG~~i~vDGG~~l~ 261 (274)
T d1xhla_ 241 RNLSSYIIGQSIVADGGSTLV 261 (274)
T ss_dssp HHHHTTCCSCEEEESTTGGGC
T ss_pred CccccCccCcEEEeCcCHHHh
Confidence 5 6899999999999999863
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=100.00 E-value=5.1e-56 Score=368.00 Aligned_cols=247 Identities=29% Similarity=0.421 Sum_probs=223.2
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHh-cCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS-KGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
.||++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+ .+.++.++.+|++++++++++++++.+
T Consensus 4 ~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (260)
T d1h5qa_ 4 TISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDA 83 (260)
T ss_dssp EECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999999999999988888754 477899999999999999999999999
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhh-CCCceEEEEccccccc-------cCC
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKS-AGNGNIIFISSVAGVI-------AIP 158 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~iv~vsS~~~~~-------~~~ 158 (263)
++ +++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|.+ +..++|++++|..... +.+
T Consensus 84 ~~-g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~~ 162 (260)
T d1h5qa_ 84 DL-GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSL 162 (260)
T ss_dssp HS-CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEEC
T ss_pred Hh-CCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccCc
Confidence 99 89999999999998889999999999999999999999999999999864 4567788877766543 335
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHH
Q 024752 159 MCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAF 238 (263)
Q Consensus 159 ~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ 238 (263)
+...|+++|+|+.+|+|+++.|++++|||||+|+||+|+|++.....+ +..+......|++|+++|+|||++++|
T Consensus 163 ~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~-----~~~~~~~~~~pl~R~g~pedvA~~v~f 237 (260)
T d1h5qa_ 163 TQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDK-----KIRDHQASNIPLNRFAQPEEMTGQAIL 237 (260)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCH-----HHHHHHHHTCTTSSCBCGGGGHHHHHH
T ss_pred cccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCH-----HHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 678899999999999999999999999999999999999999866432 223556678999999999999999999
Q ss_pred HcCCCCCCccCcEEEeCCCccc
Q 024752 239 LCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 239 l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
|+|+.++|+|||.|.+|||+.+
T Consensus 238 L~S~~s~~itG~~i~VDGG~~~ 259 (260)
T d1h5qa_ 238 LLSDHATYMTGGEYFIDGGQLI 259 (260)
T ss_dssp HHSGGGTTCCSCEEEECTTGGG
T ss_pred HhcchhCCCcCceEEECCCeec
Confidence 9999999999999999999874
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-55 Score=371.97 Aligned_cols=250 Identities=31% Similarity=0.451 Sum_probs=226.3
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHh-----cCCceEEEeccCCCHHHHHHHHHHH
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS-----KGLQVSGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~ 84 (263)
-|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.. .+.++.++.+|++++++++++++++
T Consensus 9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~ 88 (297)
T d1yxma1 9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST 88 (297)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence 38999999999999999999999999999999999999999999999874 2567999999999999999999999
Q ss_pred HhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchh
Q 024752 85 SSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYA 164 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~ 164 (263)
.+++ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++.++||++|| .+..+.|+...|+
T Consensus 89 ~~~~-G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss-~~~~~~~~~~~Y~ 166 (297)
T d1yxma1 89 LDTF-GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIV-PTKAGFPLAVHSG 166 (297)
T ss_dssp HHHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECC-CCTTCCTTCHHHH
T ss_pred HHHh-CCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccc-cccccccccccch
Confidence 9999 8999999999999888999999999999999999999999999999999998899999866 4556788899999
Q ss_pred hHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCC
Q 024752 165 SSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244 (263)
Q Consensus 165 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~ 244 (263)
++|+|+++|+|++|.|++++|||||+|+||+|+|++......... .+.........|++|+++|+|||++++||+|+.+
T Consensus 167 asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~-~~~~~~~~~~~plgR~g~pedvA~~v~fL~Sd~s 245 (297)
T d1yxma1 167 AARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWG-QSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAA 245 (297)
T ss_dssp HHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGG-GGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSGGG
T ss_pred hHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence 999999999999999999999999999999999998754332211 1122455667899999999999999999999999
Q ss_pred CCccCcEEEeCCCccccC
Q 024752 245 SYVTGQVICVDGGYSVTG 262 (263)
Q Consensus 245 ~~~~G~~i~~dgG~~~~~ 262 (263)
+|+|||+|.+|||+++.+
T Consensus 246 ~~iTG~~i~VDGG~sl~~ 263 (297)
T d1yxma1 246 SFITGQSVDVDGGRSLYT 263 (297)
T ss_dssp TTCCSCEEEESTTGGGCB
T ss_pred cCcCCcEEEeCcChhhhc
Confidence 999999999999998853
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=2.1e-55 Score=363.83 Aligned_cols=248 Identities=23% Similarity=0.313 Sum_probs=214.7
Q ss_pred cCCCCCCEEEEecCCC--chHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 8 RWSLKGMTALVTGGTK--GIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~--giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
++||+||++|||||+| |||+++|++|+++|++|++.+|+++..++. +++...+.+..++++|++++++++++++++.
T Consensus 3 ~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (256)
T d1ulua_ 3 TVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEA-EKLAEALGGALLFRADVTQDEELDALFAGVK 81 (256)
T ss_dssp EECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHHHHTTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHH-HHhhhccCcccccccccCCHHHHHHHHHHHH
Confidence 5689999999999987 999999999999999999999997655544 4444445567889999999999999999999
Q ss_pred hhcCCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCc
Q 024752 86 SQFDGKLNILINNAGTFIP----KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCS 161 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~ 161 (263)
+++ +++|++|||||+... .++.+.+.++|++.+++|+.+++.++++++|.|++ +|+||++||..+..+.|+..
T Consensus 82 ~~~-g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--~G~Iv~isS~~~~~~~~~~~ 158 (256)
T d1ulua_ 82 EAF-GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKYN 158 (256)
T ss_dssp HHH-SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBCTTCH
T ss_pred Hhc-CCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc--CCEEEEEeehHhcCCCCCch
Confidence 999 899999999998753 34567889999999999999999999999999976 58999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcC
Q 024752 162 IYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCL 241 (263)
Q Consensus 162 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s 241 (263)
+|+++|+|+++|+|++|.|++++|||||+|+||+++|++.......+.. ........|++|+++|+|||+++.||+|
T Consensus 159 ~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~---~~~~~~~~pl~R~~~pedvA~~v~fL~S 235 (256)
T d1ulua_ 159 VMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKM---YDRVAQTAPLRRNITQEEVGNLGLFLLS 235 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHH---HHHHHHHSTTSSCCCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHH---HHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999987665443333 3566678899999999999999999999
Q ss_pred CCCCCccCcEEEeCCCccccC
Q 024752 242 SATSYVTGQVICVDGGYSVTG 262 (263)
Q Consensus 242 ~~~~~~~G~~i~~dgG~~~~~ 262 (263)
+.++|+|||.|.+|||+++.|
T Consensus 236 ~~s~~itG~~i~VDGG~~~~G 256 (256)
T d1ulua_ 236 PLASGITGEVVYVDAGYHIMG 256 (256)
T ss_dssp GGGTTCCSCEEEESTTGGGBC
T ss_pred chhCCccCCeEEECcCEeCcC
Confidence 999999999999999999987
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=100.00 E-value=4.3e-55 Score=365.19 Aligned_cols=249 Identities=29% Similarity=0.389 Sum_probs=218.5
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
|+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++ +.++..+.+|++++++++++++++.+++
T Consensus 1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 77 (276)
T d1bdba_ 1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH---GDNVLGIVGDVRSLEDQKQAASRCVARF 77 (276)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCCeeEEecccccHHHHHHHHHHHHHHh
Confidence 6789999999999999999999999999999999999999888777665 4578999999999999999999999999
Q ss_pred CCCccEEEeCCCCCCCCC-----CCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcch
Q 024752 89 DGKLNILINNAGTFIPKE-----TTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIY 163 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~-----~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y 163 (263)
+++|++|||||+..... ..+.+.+.|++.|++|+.++++++|+++|.|++++ |+||+++|..+..+.++...|
T Consensus 78 -g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~~~~~~Y 155 (276)
T d1bdba_ 78 -GKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPNGGGPLY 155 (276)
T ss_dssp -SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTTSSCHHH
T ss_pred -CCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccCCCCCchH
Confidence 89999999999875532 24455678999999999999999999999998764 899999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccch-----hHHHHHHhHhcCCCCCCCChhhHHHHHHH
Q 024752 164 ASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSN-----FLEHANRMVLRTPMLRPGEPNEVSSVVAF 238 (263)
Q Consensus 164 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~va~~~~~ 238 (263)
+++|+|+.+|+|++|.|+++. ||||+|+||+|+|++......... ..+....+....|++|+++|+|++++++|
T Consensus 156 ~asKaal~~ltr~lA~ela~~-IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeva~~v~f 234 (276)
T d1bdba_ 156 TAAKHAIVGLVRELAFELAPY-VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVF 234 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGGGGSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcc-eEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 999999999999999999985 999999999999998754432111 11123455667899999999999999999
Q ss_pred HcCC-CCCCccCcEEEeCCCccccCC
Q 024752 239 LCLS-ATSYVTGQVICVDGGYSVTGF 263 (263)
Q Consensus 239 l~s~-~~~~~~G~~i~~dgG~~~~~~ 263 (263)
|+|+ .++|+|||.|.+|||++++|+
T Consensus 235 L~S~~~a~~itG~~i~VDGG~~~~g~ 260 (276)
T d1bdba_ 235 FATRGDAAPATGALLNYDGGLGVRGF 260 (276)
T ss_dssp HHCHHHHTTCSSCEEEESSSGGGCCS
T ss_pred HcCCcccCCeeCcEEEECcChhhcce
Confidence 9994 689999999999999999874
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=1.2e-54 Score=358.09 Aligned_cols=240 Identities=21% Similarity=0.262 Sum_probs=216.7
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCccE
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNI 94 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 94 (263)
++|||||++|||+++|++|+++|++|++.+|+.+.++++...... +..+|++++++++++++++.++| |++|+
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~------~~~~dv~~~~~~~~~~~~~~~~~-G~iDi 74 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET------YPQLKPMSEQEPAELIEAVTSAY-GQVDV 74 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHH------CTTSEECCCCSHHHHHHHHHHHH-SCCCE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCc------EEEeccCCHHHHHHHHHHHHHHc-CCCCE
Confidence 789999999999999999999999999999999888776554332 23689999999999999999999 89999
Q ss_pred EEeCCCCCCC-CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHHHHH
Q 024752 95 LINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQL 173 (263)
Q Consensus 95 li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~ 173 (263)
||||||+... .++.+.+.++|++.+++|+.++++++|+++|+|++++.|+||++||..+..+.++..+|++||+|+.+|
T Consensus 75 LVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~l 154 (252)
T d1zmta1 75 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTL 154 (252)
T ss_dssp EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHH
T ss_pred EEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccHHHH
Confidence 9999998754 688899999999999999999999999999999999899999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEEecCcccCCccccccccc---hhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCc
Q 024752 174 TKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDS---NFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQ 250 (263)
Q Consensus 174 ~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~ 250 (263)
+|+++.|++++|||||+|+||+|+|++........ ...+.........|++|+++|+|||++++||+|+.++|+|||
T Consensus 155 t~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~iTG~ 234 (252)
T d1zmta1 155 ANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQ 234 (252)
T ss_dssp HHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTSCGGGTTC
T ss_pred HHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCC
Confidence 99999999999999999999999999976653322 123344666778999999999999999999999999999999
Q ss_pred EEEeCCCcccc
Q 024752 251 VICVDGGYSVT 261 (263)
Q Consensus 251 ~i~~dgG~~~~ 261 (263)
.|.+|||+++-
T Consensus 235 ~i~vdGG~~~~ 245 (252)
T d1zmta1 235 VFWLAGGFPMI 245 (252)
T ss_dssp EEEESTTCCCC
T ss_pred eEEECCCceeC
Confidence 99999999873
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=100.00 E-value=8.3e-54 Score=354.55 Aligned_cols=246 Identities=27% Similarity=0.412 Sum_probs=220.7
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEe-eCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTC-SRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
.|+||++|||||++|||+++|+.|+++|++|++. .|+++.++++.+++++.+.++.++++|++++++++++++++.+++
T Consensus 3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~ 82 (259)
T d1ja9a_ 3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF 82 (259)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence 4889999999999999999999999999999886 566677888899999888999999999999999999999999999
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccc-cCCCCcchhhHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVI-AIPMCSIYASSK 167 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-~~~~~~~Y~~sK 167 (263)
+++|++|||||.....++.+.+.++|++.|++|+.++++++++++|+|++ ++++++++|..+.. +.++...|+++|
T Consensus 83 -g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~g~~iii~s~~~~~~~~~~~~~Y~asK 159 (259)
T d1ja9a_ 83 -GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR--GGRIILTSSIAAVMTGIPNHALYAGSK 159 (259)
T ss_dssp -SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE--EEEEEEECCGGGTCCSCCSCHHHHHHH
T ss_pred -CCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhc--CCcccccccccccccCCCCchhHHHHH
Confidence 89999999999998899999999999999999999999999999999976 46777777766644 688999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccc--------hhHHHHHHhHhcCCCCCCCChhhHHHHHHHH
Q 024752 168 VAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDS--------NFLEHANRMVLRTPMLRPGEPNEVSSVVAFL 239 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l 239 (263)
+|+++|+|++++|++++|||||+|+||+++|++.+...... ...+....+....|++|+++|+||+++++||
T Consensus 160 ~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eVa~~v~fL 239 (259)
T d1ja9a_ 160 AAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSAL 239 (259)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999875542211 1123335566788999999999999999999
Q ss_pred cCCCCCCccCcEEEeCCCc
Q 024752 240 CLSATSYVTGQVICVDGGY 258 (263)
Q Consensus 240 ~s~~~~~~~G~~i~~dgG~ 258 (263)
+|+.++++|||.|.+|||+
T Consensus 240 ~S~~a~~itG~~i~vDGG~ 258 (259)
T d1ja9a_ 240 CQEESEWINGQVIKLTGGG 258 (259)
T ss_dssp HSGGGTTCCSCEEEESTTC
T ss_pred hCchhcCCcCceEEeCCCC
Confidence 9999999999999999997
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=100.00 E-value=1.8e-54 Score=354.44 Aligned_cols=238 Identities=28% Similarity=0.418 Sum_probs=210.4
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+ +.+.++.++++|++++++++++++++.+++ +
T Consensus 3 l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~-g 78 (241)
T d2a4ka1 3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVA---ALEAEAIAVVADVSDPKAVEAVFAEALEEF-G 78 (241)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---TCCSSEEEEECCTTSHHHHHHHHHHHHHHH-S
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---HcCCceEEEEecCCCHHHHHHHHHHHHHHh-C
Confidence 789999999999999999999999999999999999987765554 446789999999999999999999999999 8
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHH
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAM 170 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~ 170 (263)
++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|++ ++.++++||.+ ..+.|+...|+++|+|+
T Consensus 79 ~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~--~~~i~~~ss~a-~~~~~~~~~Y~~sK~al 155 (241)
T d2a4ka1 79 RLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEE--GGSLVLTGSVA-GLGAFGLAHYAAGKLGV 155 (241)
T ss_dssp CCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCT--TCEEEEECCCT-TCCHHHHHHHHHCSSHH
T ss_pred CccEeccccccccccchhhhhcccccccccccccccccccccccccccc--ccceeeccccc-cccccCccccchhhHHH
Confidence 9999999999998899999999999999999999999999999999876 45666666554 44557888999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCc
Q 024752 171 NQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQ 250 (263)
Q Consensus 171 ~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~ 250 (263)
++|++++++|++++|||||+|+||+++|++.....+ +...++....|++++..|+||++++.||+|+.++|+|||
T Consensus 156 ~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~-----~~~~~~~~~~p~~r~~~p~dva~~v~fL~S~~s~~itG~ 230 (241)
T d2a4ka1 156 VGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPP-----WAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQ 230 (241)
T ss_dssp HHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCH-----HHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhH-----hHHHHHHhCCCCCCCcCHHHHHHHHHHHhcchhCCCcCc
Confidence 999999999999999999999999999998765432 223566678999999999999999999999999999999
Q ss_pred EEEeCCCccc
Q 024752 251 VICVDGGYSV 260 (263)
Q Consensus 251 ~i~~dgG~~~ 260 (263)
+|.+|||+++
T Consensus 231 ~i~vDGG~s~ 240 (241)
T d2a4ka1 231 ALYVDGGRSI 240 (241)
T ss_dssp EEEESTTTTT
T ss_pred eEEeCCCccc
Confidence 9999999986
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=8.9e-54 Score=349.11 Aligned_cols=230 Identities=33% Similarity=0.468 Sum_probs=206.1
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
|+||++|||||++|||+++|++|+++|++|++++|+++.+++. + ..++.+|+++. ++.+.+++ +
T Consensus 2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~-------~--~~~~~~Dv~~~------~~~~~~~~-g 65 (234)
T d1o5ia_ 2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS-------G--HRYVVCDLRKD------LDLLFEKV-K 65 (234)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT-------C--SEEEECCTTTC------HHHHHHHS-C
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc-------C--CcEEEcchHHH------HHHHHHHh-C
Confidence 6899999999999999999999999999999999997654432 2 34678999863 34455666 8
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHH
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAM 170 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~ 170 (263)
++|+||||||+....++.+.+.++|++.+++|+.++++++|+++|.|++++.|+||+++|..+..+.++...|+++|+|+
T Consensus 66 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~asKaal 145 (234)
T d1o5ia_ 66 EVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMAL 145 (234)
T ss_dssp CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred CCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhHHHHH
Confidence 99999999999888889999999999999999999999999999999998899999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCc
Q 024752 171 NQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQ 250 (263)
Q Consensus 171 ~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~ 250 (263)
.+|+|+++.|++++|||||+|+||+++|++......+. .........|++|+++|+|++++++||+|+.++|+|||
T Consensus 146 ~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~----~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~itG~ 221 (234)
T d1o5ia_ 146 TGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEE----KKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQ 221 (234)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHH----HHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHH----HHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcCCcCc
Confidence 99999999999999999999999999999976644322 22556678899999999999999999999999999999
Q ss_pred EEEeCCCccc
Q 024752 251 VICVDGGYSV 260 (263)
Q Consensus 251 ~i~~dgG~~~ 260 (263)
+|.+|||++.
T Consensus 222 ~i~vDGG~s~ 231 (234)
T d1o5ia_ 222 TIVVDGGLSK 231 (234)
T ss_dssp EEEESTTCCC
T ss_pred EEEECccccc
Confidence 9999999874
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=100.00 E-value=7.9e-53 Score=351.12 Aligned_cols=252 Identities=30% Similarity=0.442 Sum_probs=223.7
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCC-chhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN-ETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 84 (263)
-.+.+|+||++|||||++|||+++|++|+++|++|++++|+ ++.++++.+++.+.+.++.++.+|+++++++.++++++
T Consensus 11 ~~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~ 90 (272)
T d1g0oa_ 11 PQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEA 90 (272)
T ss_dssp GGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHH
Confidence 35567999999999999999999999999999999999876 56678888888888889999999999999999999999
Q ss_pred HhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccc-cCCCCcch
Q 024752 85 SSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVI-AIPMCSIY 163 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-~~~~~~~Y 163 (263)
.+++ +++|++|||+|.....++.+.+.++|++.+++|+.++++++++++|+|.+ ++++++++|..+.. +.++...|
T Consensus 91 ~~~~-g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~--~g~~i~i~s~~~~~~~~~~~~~Y 167 (272)
T d1g0oa_ 91 VKIF-GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI--GGRLILMGSITGQAKAVPKHAVY 167 (272)
T ss_dssp HHHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT--TCEEEEECCGGGTCSSCSSCHHH
T ss_pred HHHh-CCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccc--ccccccccccccccccccchhhH
Confidence 9999 89999999999998899999999999999999999999999999999977 47888888877654 46667889
Q ss_pred hhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccch-------hHH-HHHHhHhcCCCCCCCChhhHHHH
Q 024752 164 ASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSN-------FLE-HANRMVLRTPMLRPGEPNEVSSV 235 (263)
Q Consensus 164 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~-------~~~-~~~~~~~~~~~~~~~~~~~va~~ 235 (263)
+++|+|+++|+|+++.|++++|||||+|+||+|+|++......... ..+ .........|++|+++|+|||++
T Consensus 168 ~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~ 247 (272)
T d1g0oa_ 168 SGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARV 247 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHHHHHH
Confidence 9999999999999999999999999999999999998765433211 111 11234567899999999999999
Q ss_pred HHHHcCCCCCCccCcEEEeCCCccc
Q 024752 236 VAFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 236 ~~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
+.||+|+.++|+|||.|.+|||.++
T Consensus 248 v~fL~s~~s~~itG~~i~vDGG~~m 272 (272)
T d1g0oa_ 248 VCFLASNDGGWVTGKVIGIDGGACM 272 (272)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred HHHHhCchhcCccCceEeECCCCCC
Confidence 9999999999999999999999864
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-52 Score=345.26 Aligned_cols=246 Identities=24% Similarity=0.330 Sum_probs=217.5
Q ss_pred cccCC-CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcC--CceEEEeccCCCHHHHHHHHH
Q 024752 6 EQRWS-LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG--LQVSGSVCDLKIRAQREKLME 82 (263)
Q Consensus 6 ~~~~~-~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~ 82 (263)
|+.|+ |+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+ .++.+++||++++++++++++
T Consensus 2 ~~~M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~ 81 (257)
T d1xg5a_ 2 RPGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFS 81 (257)
T ss_dssp CTTCGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHH
T ss_pred cCCCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHH
Confidence 45566 999999999999999999999999999999999999999999999998764 478899999999999999999
Q ss_pred HHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC--CceEEEEccccccccC--C
Q 024752 83 TVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG--NGNIIFISSVAGVIAI--P 158 (263)
Q Consensus 83 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~vsS~~~~~~~--~ 158 (263)
++.+++ +++|+||||||...+.++.+.+.++|++.+++|+.+++++.++++|.|++++ +|+||++||.++.... +
T Consensus 82 ~~~~~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~ 160 (257)
T d1xg5a_ 82 AIRSQH-SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLS 160 (257)
T ss_dssp HHHHHH-CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCG
T ss_pred HHHHhc-CCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCc
Confidence 999999 8999999999999999999999999999999999999999999999998754 6899999999987554 4
Q ss_pred CCcchhhHHHHHHHHHHHHHHHH--ccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHH
Q 024752 159 MCSIYASSKVAMNQLTKNLACEW--AKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVV 236 (263)
Q Consensus 159 ~~~~Y~~sK~a~~~~~~~~a~e~--~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~ 236 (263)
....|+++|+|+.+|+|+++.|+ +++||+||+|+||.++|++......... .+.....|++++++|+|||+++
T Consensus 161 ~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~-----~~~~~~~~~~r~~~pedvA~~v 235 (257)
T d1xg5a_ 161 VTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDP-----EKAAATYEQMKCLKPEDVAEAV 235 (257)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCH-----HHHHHHHC---CBCHHHHHHHH
T ss_pred ccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhH-----HHHHhcCCCCCCcCHHHHHHHH
Confidence 45679999999999999999998 6889999999999999999876543321 3445567999999999999999
Q ss_pred HHHcCCCCCCccCcEEEeCCC
Q 024752 237 AFLCLSATSYVTGQVICVDGG 257 (263)
Q Consensus 237 ~~l~s~~~~~~~G~~i~~dgG 257 (263)
+||+|+.++++|||++.-++|
T Consensus 236 ~fL~s~~a~~itG~i~i~~~g 256 (257)
T d1xg5a_ 236 IYVLSTPAHIQIGDIQMRPTG 256 (257)
T ss_dssp HHHHHSCTTEEEEEEEEEETT
T ss_pred HHHhCChhcCeECCEEEEeCC
Confidence 999999999999997544444
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=100.00 E-value=1.1e-52 Score=343.57 Aligned_cols=230 Identities=27% Similarity=0.380 Sum_probs=213.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCe-------EEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAI-------VHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~-------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
+++|||||++|||+++|++|+++|++ |++++|+++.++++.+++.+.+.++.++.+|++++++++++++++.+
T Consensus 2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (240)
T d2bd0a1 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE 81 (240)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 57899999999999999999999997 99999999999999999998888999999999999999999999999
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhH
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASS 166 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s 166 (263)
+| |++|+||||||+....++.+.+.++|++.|++|+.|+++++|+++|+|+++++|+||++||.++..+.|+...|++|
T Consensus 82 ~~-g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~as 160 (240)
T d2bd0a1 82 RY-GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMS 160 (240)
T ss_dssp HT-SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred Hc-CCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChHHHHH
Confidence 99 89999999999999999999999999999999999999999999999999989999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
|+|+.+|+++++.|++++|||||+|+||+|+|+|........ ..+...|+|+|++++||+++.+++
T Consensus 161 K~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~~--------------~~~~~~PedvA~~v~~l~s~~~~~ 226 (240)
T d2bd0a1 161 KFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEM--------------QALMMMPEDIAAPVVQAYLQPSRT 226 (240)
T ss_dssp HHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTT--------------GGGSBCHHHHHHHHHHHHTSCTTE
T ss_pred HHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHhh--------------HhcCCCHHHHHHHHHHHHcCCccC
Confidence 999999999999999999999999999999999976543321 124467999999999999998888
Q ss_pred ccCc-EEEeCCCc
Q 024752 247 VTGQ-VICVDGGY 258 (263)
Q Consensus 247 ~~G~-~i~~dgG~ 258 (263)
++|+ .|..+||.
T Consensus 227 ~~~~~~i~p~~G~ 239 (240)
T d2bd0a1 227 VVEEIILRPTSGD 239 (240)
T ss_dssp EEEEEEEEETTCC
T ss_pred ccCCEEEEecCCC
Confidence 8887 55577773
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-53 Score=351.50 Aligned_cols=240 Identities=24% Similarity=0.354 Sum_probs=213.2
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc--CCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK--GLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+. +.++.++++|++++++++++++++.+++
T Consensus 1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (254)
T d2gdza1 1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF 80 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 47999999999999999999999999999999999999999999988654 4579999999999999999999999999
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC---CceEEEEccccccccCCCCcchhh
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG---NGNIIFISSVAGVIAIPMCSIYAS 165 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~iv~vsS~~~~~~~~~~~~Y~~ 165 (263)
|++|+||||||+... ++|++.+++|+.+++++++.++|+|.+++ +|+||++||..+..+.|+..+|++
T Consensus 81 -G~iDilVnnAg~~~~--------~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~a 151 (254)
T d2gdza1 81 -GRLDILVNNAGVNNE--------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCA 151 (254)
T ss_dssp -SCCCEEEECCCCCCS--------SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred -CCcCeeccccccccc--------ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHH
Confidence 899999999998643 45899999999999999999999998754 478999999999999999999999
Q ss_pred HHHHHHHHHHH--HHHHHccCCcEEEEEecCcccCCccccccccch---hHHHHHHhHhcCCCCCCCChhhHHHHHHHHc
Q 024752 166 SKVAMNQLTKN--LACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSN---FLEHANRMVLRTPMLRPGEPNEVSSVVAFLC 240 (263)
Q Consensus 166 sK~a~~~~~~~--~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~ 240 (263)
||+|+.+|+|+ ++.|++++|||||+|+||+|+|+|......... ..+....+....|++++++|+|||++++||+
T Consensus 152 sKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~ 231 (254)
T d2gdza1 152 SKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLI 231 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHH
Confidence 99999999997 688999999999999999999999876544322 1122244556678899999999999999999
Q ss_pred CCCCCCccCcEEEeCCCcccc
Q 024752 241 LSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 241 s~~~~~~~G~~i~~dgG~~~~ 261 (263)
|+. ++|||.|.+|||+.++
T Consensus 232 s~~--~itG~~i~VdGG~~~~ 250 (254)
T d2gdza1 232 EDD--ALNGAIMKITTSKGIH 250 (254)
T ss_dssp HCT--TCSSCEEEEETTTEEE
T ss_pred cCC--CCCCCEEEECCCCeee
Confidence 964 5999999999999875
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.5e-53 Score=346.00 Aligned_cols=240 Identities=28% Similarity=0.393 Sum_probs=212.8
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+ ...+....+|+.+.+.++.... .+ +
T Consensus 4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~-----~~~~~~~~~d~~~~~~~~~~~~----~~-~ 73 (245)
T d2ag5a1 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK-----YPGIQTRVLDVTKKKQIDQFAN----EV-E 73 (245)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG-----STTEEEEECCTTCHHHHHHHHH----HC-S
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-----ccCCceeeeecccccccccccc----cc-c
Confidence 899999999999999999999999999999999999887765533 2447788899998776666544 44 7
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccc-ccCCCCcchhhHHHH
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGV-IAIPMCSIYASSKVA 169 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~-~~~~~~~~Y~~sK~a 169 (263)
++|++|||||.....++.+.+.++|++.+++|+.+++.+++++.|+|.+++.|+||+++|..+. .+.++..+|+++|+|
T Consensus 74 ~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~sKaa 153 (245)
T d2ag5a1 74 RLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAA 153 (245)
T ss_dssp CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHH
T ss_pred cceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHHHHHH
Confidence 8999999999999888999999999999999999999999999999999999999999998775 577888999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccch-hHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCcc
Q 024752 170 MNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSN-FLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVT 248 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~ 248 (263)
+++|+|++|.|++++|||||+|+||+|+|++......... ..+....+....|++|+++|+|+++++.||+++.++++|
T Consensus 154 l~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~~v~fL~s~~s~~iT 233 (245)
T d2ag5a1 154 VIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVT 233 (245)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCCCc
Confidence 9999999999999999999999999999999876544322 223335566789999999999999999999999999999
Q ss_pred CcEEEeCCCccc
Q 024752 249 GQVICVDGGYSV 260 (263)
Q Consensus 249 G~~i~~dgG~~~ 260 (263)
||.|.+|||+++
T Consensus 234 G~~i~VDGG~sl 245 (245)
T d2ag5a1 234 GNPVIIDGGWSL 245 (245)
T ss_dssp SCEEEECTTGGG
T ss_pred CceEEeCCCcCC
Confidence 999999999985
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=6.9e-52 Score=349.21 Aligned_cols=233 Identities=23% Similarity=0.396 Sum_probs=208.3
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCC---------chhHHHHHHHHHhcCCceEEEeccCCCHHHH
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN---------ETELNQRIQEWKSKGLQVSGSVCDLKIRAQR 77 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~---------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 77 (263)
++|+++||++|||||++|||+++|++|+++|++|++.+|+ .+.++++.+++...+ ....+|+++.+++
T Consensus 1 sPm~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~~ 77 (302)
T d1gz6a_ 1 SPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG---GKAVANYDSVEAG 77 (302)
T ss_dssp CCCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTT---CEEEEECCCGGGH
T ss_pred CCcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcc---cccccccchHHHH
Confidence 4789999999999999999999999999999999998664 455677777776543 3456899999999
Q ss_pred HHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC
Q 024752 78 EKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI 157 (263)
Q Consensus 78 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~ 157 (263)
+++++++.+++ |++|+||||||+....++.+.+.++|++.+++|+.|+++++|+++|+|++++.|+||++||..+..+.
T Consensus 78 ~~~v~~~~~~~-G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~ 156 (302)
T d1gz6a_ 78 EKLVKTALDTF-GRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGN 156 (302)
T ss_dssp HHHHHHHHHHT-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC
T ss_pred HHHHHHHHHHc-CCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCC
Confidence 99999999999 89999999999999999999999999999999999999999999999999989999999999999999
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHH
Q 024752 158 PMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVA 237 (263)
Q Consensus 158 ~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~ 237 (263)
++...|++||+|+.+|+++++.|++++|||||+|+||++.|++......+ . .+...|+|||++++
T Consensus 157 ~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~~~--~-------------~~~~~PedvA~~v~ 221 (302)
T d1gz6a_ 157 FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMPED--L-------------VEALKPEYVAPLVL 221 (302)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSCHH--H-------------HHHSCGGGTHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCcHh--h-------------HhcCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999988765443221 1 12246999999999
Q ss_pred HHcCCCCCCccCcEEEeCCCcc
Q 024752 238 FLCLSATSYVTGQVICVDGGYS 259 (263)
Q Consensus 238 ~l~s~~~~~~~G~~i~~dgG~~ 259 (263)
||+|+.+ ++|||.|.+|||+.
T Consensus 222 fL~S~~a-~itG~~i~vdGG~~ 242 (302)
T d1gz6a_ 222 WLCHESC-EENGGLFEVGAGWI 242 (302)
T ss_dssp HHTSTTC-CCCSCEEEEETTEE
T ss_pred HHcCCCc-CCCCcEEEeCCCce
Confidence 9999875 79999999999985
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=100.00 E-value=6.6e-51 Score=343.23 Aligned_cols=251 Identities=25% Similarity=0.350 Sum_probs=222.8
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHh-cCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS-KGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
++.+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.. .+.++.++.+|++++++++++++.+.
T Consensus 19 ~~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~ 98 (294)
T d1w6ua_ 19 PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELI 98 (294)
T ss_dssp CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhh
Confidence 44589999999999999999999999999999999999999999999888864 46778999999999999999999999
Q ss_pred hhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhh-CCCceEEEEccccccccCCCCcchh
Q 024752 86 SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKS-AGNGNIIFISSVAGVIAIPMCSIYA 164 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~iv~vsS~~~~~~~~~~~~Y~ 164 (263)
+++ +++|++|||||.....++.+.+.++|++.+.+|+.+.+.+.+...+.+.. +..+.+++++|..+..+.++..+|+
T Consensus 99 ~~~-g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~Ys 177 (294)
T d1w6ua_ 99 KVA-GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSA 177 (294)
T ss_dssp HHT-CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHH
T ss_pred hhc-cccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchHH
Confidence 998 89999999999998888889999999999999999999999888777665 4567889999998898999999999
Q ss_pred hHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCC
Q 024752 165 SSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244 (263)
Q Consensus 165 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~ 244 (263)
++|+|+++|+|++|.|++++|||||+|+||+|+|++......... ..........|++|+++|+||++++.||+++.+
T Consensus 178 asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~--~~~~~~~~~~pl~R~~~pediA~~v~fL~sd~s 255 (294)
T d1w6ua_ 178 SAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTG--TFEKEMIGRIPCGRLGTVEELANLAAFLCSDYA 255 (294)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTS--HHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGG
T ss_pred HHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcH--HHHHHHhhcCCCCCCCCHHHHHHHHHHHhCchh
Confidence 999999999999999999999999999999999999766443222 223666778899999999999999999999999
Q ss_pred CCccCcEEEeCCCccc
Q 024752 245 SYVTGQVICVDGGYSV 260 (263)
Q Consensus 245 ~~~~G~~i~~dgG~~~ 260 (263)
+|+|||+|.+|||+++
T Consensus 256 ~~itG~~i~vDGG~~l 271 (294)
T d1w6ua_ 256 SWINGAVIKFDGGEEV 271 (294)
T ss_dssp TTCCSCEEEESTTHHH
T ss_pred cCCCCcEEEECCChhh
Confidence 9999999999999875
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.3e-48 Score=323.29 Aligned_cols=246 Identities=20% Similarity=0.302 Sum_probs=217.4
Q ss_pred CCCCEEEEecCCC--chHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 11 LKGMTALVTGGTK--GIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 11 ~~~k~vlVtGas~--giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
|+||++|||||++ |||+++|+.|+++|++|++.+|+++..+.. +++............|+++..++...++++.+.+
T Consensus 3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (258)
T d1qsga_ 3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV-EEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW 81 (258)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHH-HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHhhcCCcceeecccchHHHHHHHHHHhhhcc
Confidence 7899999999999 899999999999999999999997655444 4554545567788999999999999999999998
Q ss_pred CCCccEEEeCCCCCCCCCC-----CCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcch
Q 024752 89 DGKLNILINNAGTFIPKET-----TEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIY 163 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y 163 (263)
+++|++|||++......+ .....+.|...+.+|+.+.+.+.+++.+.|++ ++.||++||..+..+.|....|
T Consensus 82 -~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Ii~iss~~~~~~~~~~~~Y 158 (258)
T d1qsga_ 82 -PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVM 158 (258)
T ss_dssp -SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTTHH
T ss_pred -cccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccC--CcEEEEecchhhccCCCCcHHH
Confidence 899999999998765443 34567889999999999999999999999865 5789999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 164 ASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 164 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
+++|+|+++|+|+++.|++++|||||+|+||+|+|++.......... ........|++|+++|||+++++.||+|+.
T Consensus 159 ~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~---~~~~~~~~pl~R~~~peeia~~v~fL~s~~ 235 (258)
T d1qsga_ 159 GLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKM---LAHCEAVTPIRRTVTIEDVGNSAAFLCSDL 235 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHH---HHHHHHHSTTSSCCCHHHHHHHHHHHTSGG
T ss_pred HHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhH---HHHHHhCCCCCCCcCHHHHHHHHHHHhCch
Confidence 99999999999999999999999999999999999997665433322 355666789999999999999999999999
Q ss_pred CCCccCcEEEeCCCccccCC
Q 024752 244 TSYVTGQVICVDGGYSVTGF 263 (263)
Q Consensus 244 ~~~~~G~~i~~dgG~~~~~~ 263 (263)
++++|||+|.+|||+++.||
T Consensus 236 s~~itG~~i~vDGG~~i~g~ 255 (258)
T d1qsga_ 236 SAGISGEVVHVDGGFSIAAM 255 (258)
T ss_dssp GTTCCSCEEEESTTGGGBCS
T ss_pred hcCccCceEEECcCHHHhcC
Confidence 99999999999999999998
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=5.8e-49 Score=325.45 Aligned_cols=242 Identities=20% Similarity=0.202 Sum_probs=211.6
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHH---CCCeEEEeeCCchhHHHHHHHHHhc--CCceEEEeccCCCHHHHHHHHHHH
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAA---FGAIVHTCSRNETELNQRIQEWKSK--GLQVSGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~---~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~ 84 (263)
.|+||+++||||++|||+++|++|++ +|++|++++|+++.++++.+++... +.++.+++||++++++++++++.+
T Consensus 3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~ 82 (259)
T d1oaaa_ 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV 82 (259)
T ss_dssp CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence 48899999999999999999999997 7999999999999999999999764 557899999999999999999998
Q ss_pred Hhhc---CCCccEEEeCCCCCCC---CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC--CceEEEEcccccccc
Q 024752 85 SSQF---DGKLNILINNAGTFIP---KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG--NGNIIFISSVAGVIA 156 (263)
Q Consensus 85 ~~~~---~~~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~vsS~~~~~~ 156 (263)
.+.. ++.+|++|||||...+ +++.+.+.++|+++|++|+.++++++++++|+|++++ .|+||++||.++..+
T Consensus 83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~ 162 (259)
T d1oaaa_ 83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP 162 (259)
T ss_dssp HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred HHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCC
Confidence 7742 3579999999998643 4578899999999999999999999999999999865 589999999999999
Q ss_pred CCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHH
Q 024752 157 IPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVV 236 (263)
Q Consensus 157 ~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~ 236 (263)
.|+...|++||+|+++|+++|+.| ++|||||+|+||+|+|+|...........+....+....|.++..+|+|+++.+
T Consensus 163 ~~~~~~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~evA~~i 240 (259)
T d1oaaa_ 163 YKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKL 240 (259)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHH
T ss_pred CccchHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 999999999999999999999998 679999999999999998765543322223334455556788999999999999
Q ss_pred HHHcCCCCCCccCcEEEe
Q 024752 237 AFLCLSATSYVTGQVICV 254 (263)
Q Consensus 237 ~~l~s~~~~~~~G~~i~~ 254 (263)
++|+++ ++++|||+|++
T Consensus 241 ~~ll~~-~s~~TG~~idv 257 (259)
T d1oaaa_ 241 LGLLQK-DTFQSGAHVDF 257 (259)
T ss_dssp HHHHHH-CCSCTTEEEET
T ss_pred HHHhhh-ccCCCCCeEEe
Confidence 999986 46999999976
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=100.00 E-value=1.6e-48 Score=321.21 Aligned_cols=236 Identities=19% Similarity=0.194 Sum_probs=198.3
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHh-cCCceEEEeccCC-CHHHHHHHHHHHHh
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS-KGLQVSGSVCDLK-IRAQREKLMETVSS 86 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~-~~~~~~~~~~~~~~ 86 (263)
||++||++|||||++|||+++|++|+++|++|++++|+.+..+...+.... .+.++.++.+|++ +.++++++++++.+
T Consensus 1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 80 (254)
T d1sbya1 1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD 80 (254)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence 689999999999999999999999999999999998888776655443333 3457899999998 67889999999999
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC---CCceEEEEccccccccCCCCcch
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA---GNGNIIFISSVAGVIAIPMCSIY 163 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~~~iv~vsS~~~~~~~~~~~~Y 163 (263)
++ ++||+||||||.. +.++|++++++|++|+++++++++|.|.++ ..|+||+++|..+..+.++...|
T Consensus 81 ~~-g~iDilvnnAG~~--------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y 151 (254)
T d1sbya1 81 QL-KTVDILINGAGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVY 151 (254)
T ss_dssp HH-SCCCEEEECCCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHH
T ss_pred Hc-CCCCEEEeCCCCC--------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHH
Confidence 99 8999999999964 457799999999999999999999999875 35899999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 164 ASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 164 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
++||+|+.+|+++++.|++++|||||+|+||+|+|++.+......... .++.......+..+||++++.++++.+.
T Consensus 152 ~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~---~~~~~~~~~~~~~~~e~va~~~~~~~~~- 227 (254)
T d1sbya1 152 SASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVE---PRVAELLLSHPTQTSEQCGQNFVKAIEA- 227 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSC---TTHHHHHTTSCCEEHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHH---HHHHhccccCCCCCHHHHHHHHHHhhhC-
Confidence 999999999999999999999999999999999999876554333222 1111122233455799999988877653
Q ss_pred CCCccCcEEEeCCCcc
Q 024752 244 TSYVTGQVICVDGGYS 259 (263)
Q Consensus 244 ~~~~~G~~i~~dgG~~ 259 (263)
+.||+.|.+|||+.
T Consensus 228 --~~tG~vi~vdgG~l 241 (254)
T d1sbya1 228 --NKNGAIWKLDLGTL 241 (254)
T ss_dssp --CCTTCEEEEETTEE
T ss_pred --CCCCCEEEECCCEe
Confidence 35899999999963
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-48 Score=316.93 Aligned_cols=218 Identities=23% Similarity=0.330 Sum_probs=200.0
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
+-+++||+++||||++|||+++|++|+++|++|++++|++++++++.+++.+.+.++.++.||++|+++++++++++.++
T Consensus 2 ~~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~ 81 (244)
T d1yb1a_ 2 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE 81 (244)
T ss_dssp CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 34799999999999999999999999999999999999999999999999988889999999999999999999999999
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHH
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSK 167 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK 167 (263)
+ +++|++|||||.....++.+.+.+.|+++|++|+.|+++++++++|.|++++.|+||++||.++..+.|++.+|++||
T Consensus 82 ~-g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asK 160 (244)
T d1yb1a_ 82 I-GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSK 160 (244)
T ss_dssp T-CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHH
T ss_pred c-CCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHHHHH
Confidence 8 899999999999999888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcc---CCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcC
Q 024752 168 VAMNQLTKNLACEWAK---DKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCL 241 (263)
Q Consensus 168 ~a~~~~~~~~a~e~~~---~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s 241 (263)
+|+.+|+++|+.|+++ +||+||+|+||+|+|++...... +..+..+|+++++.+.....
T Consensus 161 aal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~~---------------~~~~~~~pe~va~~i~~~~~ 222 (244)
T d1yb1a_ 161 FAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPST---------------SLGPTLEPEEVVNRLMHGIL 222 (244)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTHH---------------HHCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcCc---------------cccCCCCHHHHHHHHHHHHh
Confidence 9999999999999976 58999999999999998754211 12345679999999876543
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.4e-47 Score=311.25 Aligned_cols=234 Identities=26% Similarity=0.381 Sum_probs=203.7
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
++|||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++ +.......+|+.+.++++.....+...+
T Consensus 2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 77 (248)
T d2o23a1 2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKGKF- 77 (248)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCCccccccccccccccccccccccccc-
Confidence 689999999999999999999999999999999999999998888776 4568888999999999999999998887
Q ss_pred CCccEEEeCCCCCCCC------CCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC------CCceEEEEccccccccC
Q 024752 90 GKLNILINNAGTFIPK------ETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA------GNGNIIFISSVAGVIAI 157 (263)
Q Consensus 90 ~~id~li~~ag~~~~~------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~~~iv~vsS~~~~~~~ 157 (263)
..+|.+++|+++.... ++.+.+.++|++.+++|+.+++++++++.|+|.++ ++|+||++||..+..+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~ 157 (248)
T d2o23a1 78 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ 157 (248)
T ss_dssp SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred ccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCC
Confidence 7899999998876543 34567889999999999999999999999998654 56899999999999999
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCC-CCCCChhhHHHHH
Q 024752 158 PMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPM-LRPGEPNEVSSVV 236 (263)
Q Consensus 158 ~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~ 236 (263)
|+..+|+++|+|+++|+|+++.|++++|||||+|+||+++|++.....+. ....+....|+ +|+++|+|||+++
T Consensus 158 ~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~-----~~~~~~~~~pl~~R~g~peevA~~v 232 (248)
T d2o23a1 158 VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEK-----VCNFLASQVPFPSRLGDPAEYAHLV 232 (248)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC---------------CHHHHTCSSSCSCBCHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHH-----HHHHHHhcCCCCCCCcCHHHHHHHH
Confidence 99999999999999999999999999999999999999999998765432 12445556776 8999999999999
Q ss_pred HHHcCCCCCCccCcEEEe
Q 024752 237 AFLCLSATSYVTGQVICV 254 (263)
Q Consensus 237 ~~l~s~~~~~~~G~~i~~ 254 (263)
+||++ ++|+|||+|+|
T Consensus 233 ~fL~s--~~~itGq~I~v 248 (248)
T d2o23a1 233 QAIIE--NPFLNGEVIRL 248 (248)
T ss_dssp HHHHH--CTTCCSCEEEE
T ss_pred HHHHh--CCCCCceEeEC
Confidence 99996 57999999986
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=3.3e-47 Score=325.07 Aligned_cols=249 Identities=17% Similarity=0.196 Sum_probs=207.1
Q ss_pred CCCEEEEec--CCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc-C-----------CceEEE----------
Q 024752 12 KGMTALVTG--GTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-G-----------LQVSGS---------- 67 (263)
Q Consensus 12 ~~k~vlVtG--as~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~-----------~~~~~~---------- 67 (263)
.+|++|||| +++|||+++|++|+++|++|++.+++.............. . ......
T Consensus 1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (329)
T d1uh5a_ 1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN 80 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence 379999999 5589999999999999999999999877655444332211 0 011122
Q ss_pred ----------eccCCCHHHHHHHHHHHHhhcCCCccEEEeCCCCCCC--CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhH
Q 024752 68 ----------VCDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIP--KETTEFTEEDFSTVMTTNFESAYHLSQLAHP 135 (263)
Q Consensus 68 ----------~~D~~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 135 (263)
.+|++++++++++++++.++| |++|++|||||.... +++.+.+.++|++.+++|+.+++.++|+++|
T Consensus 81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~ 159 (329)
T d1uh5a_ 81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKY-GKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVN 159 (329)
T ss_dssp GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHH-CCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred ccchhhhhhhhhhhhhHHHHHHHHHHHHHHh-CCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHh
Confidence 347778889999999999999 899999999998754 4678899999999999999999999999999
Q ss_pred HHhhCCCceEEEEccccccccCCC-CcchhhHHHHHHHHHHHHHHHHcc-CCcEEEEEecCcccCCcccccc--------
Q 024752 136 LLKSAGNGNIIFISSVAGVIAIPM-CSIYASSKVAMNQLTKNLACEWAK-DKIRVNTVAPWVIRTPLLDTVE-------- 205 (263)
Q Consensus 136 ~~~~~~~~~iv~vsS~~~~~~~~~-~~~Y~~sK~a~~~~~~~~a~e~~~-~gi~v~~v~PG~v~t~~~~~~~-------- 205 (263)
+|++ +|+||++||..+..+.|+ ...|+++|+|+++|+|+++.||++ +|||||+|+||+|+|+..+...
T Consensus 160 ~m~~--~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~~~~ 237 (329)
T d1uh5a_ 160 IMKP--QSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYEN 237 (329)
T ss_dssp GEEE--EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC--------
T ss_pred hccc--ccccccceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchhhhhhh
Confidence 9965 589999999999988887 567999999999999999999986 6999999999999996433211
Q ss_pred --------------------------------ccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCcEEE
Q 024752 206 --------------------------------KDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVIC 253 (263)
Q Consensus 206 --------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~ 253 (263)
......+....+....|++|+++|+||+++++||+|+.++|+|||.|.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pedvA~~v~fLaSd~s~~iTGq~i~ 317 (329)
T d1uh5a_ 238 NTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQTIY 317 (329)
T ss_dssp ----------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred hhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCchhCCccCCeEE
Confidence 111223344566678899999999999999999999999999999999
Q ss_pred eCCCccccCC
Q 024752 254 VDGGYSVTGF 263 (263)
Q Consensus 254 ~dgG~~~~~~ 263 (263)
+|||+++.||
T Consensus 318 VDGG~~~~g~ 327 (329)
T d1uh5a_ 318 VDNGLNIMFL 327 (329)
T ss_dssp ESTTGGGCSS
T ss_pred ECCCcccccC
Confidence 9999999986
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=100.00 E-value=6.5e-47 Score=319.02 Aligned_cols=251 Identities=23% Similarity=0.251 Sum_probs=205.1
Q ss_pred ccCCCCCCEEEEecCCC--chHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc---------CC--c-eEEEecc--
Q 024752 7 QRWSLKGMTALVTGGTK--GIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK---------GL--Q-VSGSVCD-- 70 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~--giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~---------~~--~-~~~~~~D-- 70 (263)
.++||+||++|||||++ |||+++|++|+++|++|++.+|++............. .. . -....+|
T Consensus 2 ~~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (297)
T d1d7oa_ 2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAV 81 (297)
T ss_dssp CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTT
T ss_pred CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence 47899999999999876 9999999999999999999999876544333222110 00 0 0122222
Q ss_pred ------------------CCCHHHHHHHHHHHHhhcCCCccEEEeCCCCCC--CCCCCCCCHHHHHHHHHhhhHhHHHHH
Q 024752 71 ------------------LKIRAQREKLMETVSSQFDGKLNILINNAGTFI--PKETTEFTEEDFSTVMTTNFESAYHLS 130 (263)
Q Consensus 71 ------------------~~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~ 130 (263)
.++..+++++++++.++| +++|+||||||... ..++.+.+.++|++.+++|+.+++.++
T Consensus 82 ~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~-G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~ 160 (297)
T d1d7oa_ 82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDF-GSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLL 160 (297)
T ss_dssp CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHH-SCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred ccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHh-CCCcccccccccccccccchhhhhcccccccccchhhhhhhhh
Confidence 345567789999999999 89999999999864 357888999999999999999999999
Q ss_pred HHHhHHHhhCCCceEEEEcccccc-ccCCCCcchhhHHHHHHHHHHHHHHHHc-cCCcEEEEEecCcccCCccccccccc
Q 024752 131 QLAHPLLKSAGNGNIIFISSVAGV-IAIPMCSIYASSKVAMNQLTKNLACEWA-KDKIRVNTVAPWVIRTPLLDTVEKDS 208 (263)
Q Consensus 131 ~~~~~~~~~~~~~~iv~vsS~~~~-~~~~~~~~Y~~sK~a~~~~~~~~a~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~ 208 (263)
++++|.|.++ ++++.+++.... ...+....|.++|+++..+++.++.|++ ++|||||+|+||+++|++.......+
T Consensus 161 ~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~ 238 (297)
T d1d7oa_ 161 SHFLPIMNPG--GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFID 238 (297)
T ss_dssp HHHGGGEEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHH
T ss_pred hHHHHHhhcC--CcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhccCCH
Confidence 9999998774 566666665544 3446678899999999999999999996 68999999999999999987543333
Q ss_pred hhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCccccCC
Q 024752 209 NFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVTGF 263 (263)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~ 263 (263)
.. ........|++|+++|+||+++++||+|+.++|+|||+|.+|||++..||
T Consensus 239 ~~---~~~~~~~~PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~s~~G~ 290 (297)
T d1d7oa_ 239 TM---IEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMGV 290 (297)
T ss_dssp HH---HHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGCSS
T ss_pred HH---HHHHHhCCCCCCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCHhhcCC
Confidence 32 35566778999999999999999999999999999999999999999997
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=100.00 E-value=2.8e-46 Score=313.19 Aligned_cols=240 Identities=27% Similarity=0.338 Sum_probs=198.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeC-CchhHHHHHHHHHhc-CCceEE-----------------EeccCCCH
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSR-NETELNQRIQEWKSK-GLQVSG-----------------SVCDLKIR 74 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~~-~~~~~~-----------------~~~D~~~~ 74 (263)
.++|||||++|||+++|++|+++|++|++.+| +.+..+++.+++.+. +..... ..+|++++
T Consensus 3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~ 82 (284)
T d1e7wa_ 3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF 82 (284)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence 58999999999999999999999999988765 566677777887653 333444 45669999
Q ss_pred HHHHHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHH--------------HHHHhhhHhHHHHHHHHhHHHh--
Q 024752 75 AQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFS--------------TVMTTNFESAYHLSQLAHPLLK-- 138 (263)
Q Consensus 75 ~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~--------------~~~~~n~~~~~~~~~~~~~~~~-- 138 (263)
++++++++++.+++ |++|+||||||+..+.++.+.+.++|+ ..|.+|+.+++++.+.+.+.+.
T Consensus 83 ~~v~~~~~~~~~~~-G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 161 (284)
T d1e7wa_ 83 TRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT 161 (284)
T ss_dssp HHHHHHHHHHHHHH-SCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHh-CCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence 99999999999999 899999999999988877766665554 4789999999999999887653
Q ss_pred ----hCCCceEEEEccccccccCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHH
Q 024752 139 ----SAGNGNIIFISSVAGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHA 214 (263)
Q Consensus 139 ----~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~ 214 (263)
+...++||+++|.....+.++..+|+++|+|+++|+|+++.|++++|||||+|+||++.+... .. .+..
T Consensus 162 ~~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~--~~-----~~~~ 234 (284)
T d1e7wa_ 162 PAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDD--MP-----PAVW 234 (284)
T ss_dssp CGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGG--SC-----HHHH
T ss_pred HHHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCcccccccccccccccccc--CC-----HHHH
Confidence 445689999999999999999999999999999999999999999999999999998654321 11 1223
Q ss_pred HHhHhcCCC-CCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 215 NRMVLRTPM-LRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 215 ~~~~~~~~~-~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
+......|+ +|+++|+||++++.||+|+.++|+|||.|.+|||++++
T Consensus 235 ~~~~~~~pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~ 282 (284)
T d1e7wa_ 235 EGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT 282 (284)
T ss_dssp HHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred HHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence 555666775 89999999999999999999999999999999999986
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=100.00 E-value=8.5e-46 Score=308.79 Aligned_cols=246 Identities=22% Similarity=0.304 Sum_probs=205.4
Q ss_pred CCCCEEEEecCCC--chHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 11 LKGMTALVTGGTK--GIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 11 ~~~k~vlVtGas~--giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
|+||++|||||+| |||+++|++|+++|++|++++|+++ +++..+++.+.+..+.+..+|+++++++.++++++.+.+
T Consensus 3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 81 (274)
T d2pd4a1 3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL 81 (274)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHc
Confidence 7899999999875 9999999999999999999999954 555667777767778889999999999999999999998
Q ss_pred CCCccEEEeCCCCCCCCC----CCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchh
Q 024752 89 DGKLNILINNAGTFIPKE----TTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYA 164 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~----~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~ 164 (263)
+++|++|||+|...... ..+..++.+...+.++..+...+.+...+.+.. ++.|+++++.+...+.+....|+
T Consensus 82 -g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~s~~~~~~~~~~~~~y~ 158 (274)
T d2pd4a1 82 -GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN--GASVLTLSYLGSTKYMAHYNVMG 158 (274)
T ss_dssp -SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTCHHHH
T ss_pred -CCCCeEEeecccccccccccccccccchhhhhhhcccccccccccccccccccc--Ccceeeecccccccccccchhhh
Confidence 89999999999875532 233455666666666666666666666554322 45677777777777778889999
Q ss_pred hHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCC
Q 024752 165 SSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSAT 244 (263)
Q Consensus 165 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~ 244 (263)
++|+|+++++++++.|++++|||||+|+||+++|++.......+.. ........|++++++|+||++++.||+|+.+
T Consensus 159 asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~---~~~~~~~~p~~r~~~pedIA~~v~fL~S~~s 235 (274)
T d2pd4a1 159 LAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMI---LKWNEINAPLRKNVSLEEVGNAGMYLLSSLS 235 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHH---HHHHHHHSTTSSCCCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHH---HHHHhhhhhccCCcCHHHHHHHHHHHhChhh
Confidence 9999999999999999999999999999999999988765443322 2445557899999999999999999999999
Q ss_pred CCccCcEEEeCCCccccCC
Q 024752 245 SYVTGQVICVDGGYSVTGF 263 (263)
Q Consensus 245 ~~~~G~~i~~dgG~~~~~~ 263 (263)
.++|||+|.+|||+++.||
T Consensus 236 ~~itG~~i~vDGG~~~~g~ 254 (274)
T d2pd4a1 236 SGVSGEVHFVDAGYHVMGM 254 (274)
T ss_dssp TTCCSCEEEESTTGGGBSS
T ss_pred CCCcCceEEECCChhhccC
Confidence 9999999999999999997
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-46 Score=312.24 Aligned_cols=236 Identities=19% Similarity=0.248 Sum_probs=191.3
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEE---EeeCCchhHH---HHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVH---TCSRNETELN---QRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~---~~~r~~~~~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
.|+||||||++|||+++|++|+++|++|+ ...|+.+..+ +..+++...+.++..+.+|++++++++++++++.+
T Consensus 2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 81 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence 48899999999999999999999998744 4456655444 44444445577899999999999999999987643
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhH
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASS 166 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s 166 (263)
+.+|++|||||.....++.+.+.|+|++.+++|+.|+++++++++|+|++++.|+||++||.++..+.|+...|++|
T Consensus 82 ---g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~as 158 (285)
T d1jtva_ 82 ---GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCAS 158 (285)
T ss_dssp ---SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHH
T ss_pred ---cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHHHH
Confidence 68999999999999999999999999999999999999999999999999989999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccch---------hHHHH-HH--hHhcCCCCCCCChhhHHH
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSN---------FLEHA-NR--MVLRTPMLRPGEPNEVSS 234 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~---------~~~~~-~~--~~~~~~~~~~~~~~~va~ 234 (263)
|+|+++|+++++.|++++||+||+|+||+|+|++.......+. ..+.. .. .....+..+..+|||||+
T Consensus 159 Kaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PeeVA~ 238 (285)
T d1jtva_ 159 KFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAE 238 (285)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCHHHHHH
Confidence 9999999999999999999999999999999999865432210 00000 11 112334556788999999
Q ss_pred HHHHHcCCC---CCCccCcE
Q 024752 235 VVAFLCLSA---TSYVTGQV 251 (263)
Q Consensus 235 ~~~~l~s~~---~~~~~G~~ 251 (263)
++++++... .+|++|+.
T Consensus 239 ~v~~~~~~~~p~~ry~~g~~ 258 (285)
T d1jtva_ 239 VFLTALRAPKPTLRYFTTER 258 (285)
T ss_dssp HHHHHHHCSSCCSEEESCST
T ss_pred HHHHHHhCCCCCeEEecHHH
Confidence 999988543 46788764
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=2.2e-44 Score=294.57 Aligned_cols=228 Identities=25% Similarity=0.298 Sum_probs=195.5
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
+|++|||||++|||+++|++|+++|++|++++|+++. .+.....+|+++......+........ ..
T Consensus 1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~------------~~~~~~~~d~~~~~~~~~~~~~~~~~~--~~ 66 (241)
T d1uaya_ 1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG------------EDLIYVEGDVTREEDVRRAVARAQEEA--PL 66 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS------------SSSEEEECCTTCHHHHHHHHHHHHHHS--CE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc------------ccceEeeccccchhhhHHHHHhhhccc--cc
Confidence 5999999999999999999999999999999998753 346778999999999999988887774 56
Q ss_pred cEEEeCCCCCCC----CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHH------hhCCCceEEEEccccccccCCCCcc
Q 024752 93 NILINNAGTFIP----KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLL------KSAGNGNIIFISSVAGVIAIPMCSI 162 (263)
Q Consensus 93 d~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~------~~~~~~~iv~vsS~~~~~~~~~~~~ 162 (263)
+.++++++.... ......+.+.|++.+++|+.+++.+++.+.+.+ .+++.|+||++||..+..+.++..+
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~ 146 (241)
T d1uaya_ 67 FAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAA 146 (241)
T ss_dssp EEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHH
T ss_pred cchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchh
Confidence 667777765533 334557889999999999999999999999984 4556799999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCC-CCCCChhhHHHHHHHHcC
Q 024752 163 YASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPM-LRPGEPNEVSSVVAFLCL 241 (263)
Q Consensus 163 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~s 241 (263)
|+++|+|+++|+|+++.|++++|||||+|+||+|+|++....... .........|+ +|+++|+||++++.||++
T Consensus 147 Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~-----~~~~~~~~~~~~~R~g~pedvA~~v~fL~s 221 (241)
T d1uaya_ 147 YAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEK-----AKASLAAQVPFPPRLGRPEEYAALVLHILE 221 (241)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHH-----HHHHHHTTCCSSCSCCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhh-----HHHHHHhcCCCCCCCcCHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999987654322 12334445554 899999999999999998
Q ss_pred CCCCCccCcEEEeCCCcccc
Q 024752 242 SATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 242 ~~~~~~~G~~i~~dgG~~~~ 261 (263)
++|+|||+|.+|||+++.
T Consensus 222 --~~~iTG~~i~VDGG~~m~ 239 (241)
T d1uaya_ 222 --NPMLNGEVVRLDGALRMA 239 (241)
T ss_dssp --CTTCCSCEEEESTTCCCC
T ss_pred --CCCCCCCEEEECCcccCC
Confidence 469999999999999863
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-44 Score=301.63 Aligned_cols=217 Identities=26% Similarity=0.357 Sum_probs=192.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHC-CCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAF-GAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
+++|||||++|||+++|++|+++ |++|++++|++++++++.+++++.+.++.++.||+++.++++++++++.+++ ++|
T Consensus 4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~-g~i 82 (275)
T d1wmaa1 4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY-GGL 82 (275)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-SSE
T ss_pred eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhc-CCc
Confidence 45699999999999999999986 8999999999999999999999888889999999999999999999999999 899
Q ss_pred cEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC---------------
Q 024752 93 NILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI--------------- 157 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~--------------- 157 (263)
|+||||||+....+..+.+.++|++.|++|++|+++++++++|.|++ .|+||+++|..+..+.
T Consensus 83 DiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~--~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~ 160 (275)
T d1wmaa1 83 DVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQQKFRSET 160 (275)
T ss_dssp EEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHHHHHHHCSS
T ss_pred EEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCcccccccceeccccccchhhhhhhcccc
Confidence 99999999998888888889999999999999999999999999976 5899999997764321
Q ss_pred --------------------------CCCcchhhHHHHHHHHHHHHHHHHcc----CCcEEEEEecCcccCCcccccccc
Q 024752 158 --------------------------PMCSIYASSKVAMNQLTKNLACEWAK----DKIRVNTVAPWVIRTPLLDTVEKD 207 (263)
Q Consensus 158 --------------------------~~~~~Y~~sK~a~~~~~~~~a~e~~~----~gi~v~~v~PG~v~t~~~~~~~~~ 207 (263)
.+...|++||+++..|++.+++|+++ .||+||+|+||+|+|+|.....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~~-- 238 (275)
T d1wmaa1 161 ITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKA-- 238 (275)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTTC--
T ss_pred cchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCcc--
Confidence 12356999999999999999999975 4999999999999999865422
Q ss_pred chhHHHHHHhHhcCCCCCCCChhhHHHHHHHHc--CCCCCCccCcEEE
Q 024752 208 SNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLC--LSATSYVTGQVIC 253 (263)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~--s~~~~~~~G~~i~ 253 (263)
..+|+|+|+.+++++ +++....+|+.+.
T Consensus 239 ------------------~~~pee~A~~~~~~a~~~~~~~~~~G~~~~ 268 (275)
T d1wmaa1 239 ------------------TKSPEEGAETPVYLALLPPDAEGPHGQFVS 268 (275)
T ss_dssp ------------------SBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred ------------------cCCHHHHHHHHHHHHcCChhhcCCCeEEEE
Confidence 236999999999987 4566678999886
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=100.00 E-value=1.1e-43 Score=294.84 Aligned_cols=246 Identities=20% Similarity=0.198 Sum_probs=204.9
Q ss_pred CCCCEEEEecC--CCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 11 LKGMTALVTGG--TKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 11 ~~~k~vlVtGa--s~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
|+||++||||| ++|||+++|++|+++|++|++++|+.++..+...+ ..+.+...+.+|++++++++++++.+.+.+
T Consensus 4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~--~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~ 81 (268)
T d2h7ma1 4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD--RLPAKAPLLELDVQNEEHLASLAGRVTEAI 81 (268)
T ss_dssp TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHT--TSSSCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHH--HcCCceeeEeeecccccccccccchhhhcc
Confidence 78999999995 57999999999999999999999998765433222 345667788999999999999999998765
Q ss_pred --CCCccEEEeCCCCCCC-----CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCc
Q 024752 89 --DGKLNILINNAGTFIP-----KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCS 161 (263)
Q Consensus 89 --~~~id~li~~ag~~~~-----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~ 161 (263)
.+++|+++||+|+... .++.+.+.++|.+.+.+|+.+.+...+...+.+.. +.+++++|.....+.|+..
T Consensus 82 ~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~s~~~~~~~p~~~ 158 (268)
T d2h7ma1 82 GAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP---GGSIVGMDFDPSRAMPAYN 158 (268)
T ss_dssp CTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECCCSSCCTTTH
T ss_pred ccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccc---ccccccccccccccCcccc
Confidence 2579999999997643 34566889999999999999999999998776543 4566667777778888999
Q ss_pred chhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccc-------hhHHHHHHhHhcCCCCC-CCChhhHH
Q 024752 162 IYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDS-------NFLEHANRMVLRTPMLR-PGEPNEVS 233 (263)
Q Consensus 162 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-------~~~~~~~~~~~~~~~~~-~~~~~~va 233 (263)
.|+++|+|+.+|+++++.|++++|||||+|+||+|+|++........ ......+......|+++ +++|+|++
T Consensus 159 ~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~~p~dva 238 (268)
T d2h7ma1 159 WMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVA 238 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHH
T ss_pred hhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999875543221 11222244555788876 89999999
Q ss_pred HHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 234 SVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 234 ~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
+++.||+|+.++++|||.|.+|||++++
T Consensus 239 ~~v~fL~Sd~a~~iTG~~i~vDGG~~~~ 266 (268)
T d2h7ma1 239 KTVCALLSDWLPATTGDIIYADGGAHTQ 266 (268)
T ss_dssp HHHHHHHSSSCTTCCSEEEEESTTGGGC
T ss_pred HHHHHHhCchhcCccCCEEEECcCcccc
Confidence 9999999999999999999999999864
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=100.00 E-value=1.3e-42 Score=288.08 Aligned_cols=241 Identities=22% Similarity=0.318 Sum_probs=200.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchh-HHHHHHHHHhc-CCceEEEeccCC----CHHHHHHHHHHHHhh
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-LNQRIQEWKSK-GLQVSGSVCDLK----IRAQREKLMETVSSQ 87 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~~-~~~~~~~~~D~~----~~~~~~~~~~~~~~~ 87 (263)
.++|||||++|||+++|++|+++|++|++++|+.++ .+++.+++... +.+.....+|+. .++.+.++++++.++
T Consensus 2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (266)
T d1mxha_ 2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA 81 (266)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence 489999999999999999999999999999998665 56677777654 556666666554 467788888888899
Q ss_pred cCCCccEEEeCCCCCCCCCCCC-----------CCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-----CCceEEEEccc
Q 024752 88 FDGKLNILINNAGTFIPKETTE-----------FTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-----GNGNIIFISSV 151 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~-----------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~vsS~ 151 (263)
+ |++|++|||||+..+.++.+ ...+.+...+..|+.+.+...+...+.+... ..+.++++++.
T Consensus 82 ~-g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (266)
T d1mxha_ 82 F-GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDA 160 (266)
T ss_dssp H-SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCG
T ss_pred h-CCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhc
Confidence 8 89999999999987654322 2356677888999999999999888877543 35788999999
Q ss_pred cccccCCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCC-CChh
Q 024752 152 AGVIAIPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRP-GEPN 230 (263)
Q Consensus 152 ~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 230 (263)
.+..+.|++..|++||+|+++|+++++.|++++|||||+|+||+++|++.... +..+.+.+..|+++. ++||
T Consensus 161 ~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~~-------~~~~~~~~~~pl~r~~~~pe 233 (266)
T d1mxha_ 161 MTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQ-------ETQEEYRRKVPLGQSEASAA 233 (266)
T ss_dssp GGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSCH-------HHHHHHHTTCTTTSCCBCHH
T ss_pred cccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCCH-------HHHHHHHhcCCCCCCCCCHH
Confidence 99999999999999999999999999999999999999999999999865321 122456667888664 7999
Q ss_pred hHHHHHHHHcCCCCCCccCcEEEeCCCccccC
Q 024752 231 EVSSVVAFLCLSATSYVTGQVICVDGGYSVTG 262 (263)
Q Consensus 231 ~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 262 (263)
|++++++||+|+.+.|+|||.|.+|||+++..
T Consensus 234 eva~~v~fL~s~~s~~itG~~i~vDGG~~l~~ 265 (266)
T d1mxha_ 234 QIADAIAFLVSKDAGYITGTTLKVDGGLILAR 265 (266)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred HHHHHHHHHhCchhCCccCCeEEECccHhhhC
Confidence 99999999999999999999999999998863
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=100.00 E-value=6.1e-43 Score=287.32 Aligned_cols=224 Identities=23% Similarity=0.251 Sum_probs=184.3
Q ss_pred CCEEEEecCCCchHHHHHHHHH---HCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh--h
Q 024752 13 GMTALVTGGTKGIGYAVVEELA---AFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS--Q 87 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~---~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~ 87 (263)
-|+||||||++|||+++|++|+ ++|++|++++|++++++++.+ +...+.++.+++||++++++++++++++.+ .
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~ 80 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAKNHSNIHILEIDLRNFDAYDKLVADIEGVTK 80 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHH-HHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHG
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-HHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhh
Confidence 4899999999999999999996 579999999999999887654 444467899999999999999999999865 4
Q ss_pred cCCCccEEEeCCCCCCCC-CCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-----------CCceEEEEccccccc
Q 024752 88 FDGKLNILINNAGTFIPK-ETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-----------GNGNIIFISSVAGVI 155 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----------~~~~iv~vsS~~~~~ 155 (263)
+ +++|+||||||+.... ++.+.+.++|++.+++|+.|+++++++++|+|+++ +.+++|+++|..+..
T Consensus 81 ~-~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~ 159 (248)
T d1snya_ 81 D-QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSI 159 (248)
T ss_dssp G-GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCS
T ss_pred c-CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccccccccc
Confidence 5 7899999999987664 57788999999999999999999999999999864 468999999998764
Q ss_pred c---CCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhH
Q 024752 156 A---IPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEV 232 (263)
Q Consensus 156 ~---~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 232 (263)
. .++..+|++||+|+.+|+++++.|++++||+||+|+||+|+|+|.....+. ++++.
T Consensus 160 ~~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~~~~--------------------~~~~~ 219 (248)
T d1snya_ 160 QGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAPL--------------------DVPTS 219 (248)
T ss_dssp TTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTCSB--------------------CHHHH
T ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccccCCC--------------------CchHH
Confidence 3 455678999999999999999999999999999999999999997643221 12222
Q ss_pred HHHHHHHcCCCCCCccCcEEEeCCCc
Q 024752 233 SSVVAFLCLSATSYVTGQVICVDGGY 258 (263)
Q Consensus 233 a~~~~~l~s~~~~~~~G~~i~~dgG~ 258 (263)
++.++.++.......+|++|.+||+.
T Consensus 220 ~~~i~~~i~~l~~~~tG~~i~~dG~~ 245 (248)
T d1snya_ 220 TGQIVQTISKLGEKQNGGFVNYDGTP 245 (248)
T ss_dssp HHHHHHHHHHCCGGGTTCEECTTSCB
T ss_pred HHHHHHHHHhcCccCCCcEEEECCeE
Confidence 22222222222334589999999975
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=6.5e-43 Score=285.00 Aligned_cols=222 Identities=18% Similarity=0.139 Sum_probs=190.4
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC-C
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD-G 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~ 90 (263)
+||++|||||++|||+++|++|+++|++|+++++++... ........+|.++.++.+.+...+.+.++ +
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE----------ASASVIVKMTDSFTEQADQVTAEVGKLLGDQ 70 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT----------SSEEEECCCCSCHHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc----------ccccceeecccCcHHHHHHHHHHHHHHhCCC
Confidence 689999999999999999999999999999999876531 23355667888889998888888877652 4
Q ss_pred CccEEEeCCCCCCC-CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHH
Q 024752 91 KLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 91 ~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
++|++|||||.... ....+.+.++|++.|++|+.++++++++++|+|++ +|+||++||.++..+.++..+|++||+|
T Consensus 71 ~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~asKaa 148 (236)
T d1dhra_ 71 KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGYGMAKGA 148 (236)
T ss_dssp CEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHH
T ss_pred CceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc--ccceeEEccHHHcCCccCCcccHHHHHH
Confidence 79999999997655 44566778999999999999999999999999976 5899999999999999999999999999
Q ss_pred HHHHHHHHHHHHc--cCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCCc
Q 024752 170 MNQLTKNLACEWA--KDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSYV 247 (263)
Q Consensus 170 ~~~~~~~~a~e~~--~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 247 (263)
+++|+++++.|++ ++||+||+|+||+++|++.+...+.. +..++.+|+++++.+.+|+++...++
T Consensus 149 l~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~~~-------------~~~~~~~pe~va~~~~~l~s~~~~~i 215 (236)
T d1dhra_ 149 VHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEA-------------DFSSWTPLEFLVETFHDWITGNKRPN 215 (236)
T ss_dssp HHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTS-------------CGGGSEEHHHHHHHHHHHHTTTTCCC
T ss_pred HHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCccc-------------hhhcCCCHHHHHHHHHHHhCCCccCC
Confidence 9999999999998 58999999999999999876544332 22355679999999999999999999
Q ss_pred cCcEEEe---CCCc
Q 024752 248 TGQVICV---DGGY 258 (263)
Q Consensus 248 ~G~~i~~---dgG~ 258 (263)
+|+.|.+ ||+.
T Consensus 216 ~G~~i~v~~~~g~t 229 (236)
T d1dhra_ 216 SGSLIQVVTTDGKT 229 (236)
T ss_dssp TTCEEEEEEETTEE
T ss_pred CCCeEEEEEECCEE
Confidence 9987665 5554
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-41 Score=283.05 Aligned_cols=191 Identities=26% Similarity=0.327 Sum_probs=179.7
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHh-cCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS-KGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.. .+..+..+.+|+++.+.+....+.+.+.+
T Consensus 12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~- 90 (269)
T d1xu9a_ 12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM- 90 (269)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHh-
Confidence 8999999999999999999999999999999999999999999988764 46678889999999999999999999998
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
+.+|+++||||.....++.+.+.++|++.+++|+.+++.+++.++|+|+++ +|+||++||.++..+.|+..+|++||+|
T Consensus 91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~-~G~ii~isS~~~~~~~p~~~~Y~asKaa 169 (269)
T d1xu9a_ 91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASKFA 169 (269)
T ss_dssp TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTTCHHHHHHHHH
T ss_pred CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc-CCcceEeccchhcCCCCCchHHHHHHHH
Confidence 899999999999988888899999999999999999999999999999764 6999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcc--CCcEEEEEecCcccCCcccc
Q 024752 170 MNQLTKNLACEWAK--DKIRVNTVAPWVIRTPLLDT 203 (263)
Q Consensus 170 ~~~~~~~~a~e~~~--~gi~v~~v~PG~v~t~~~~~ 203 (263)
+++|+++|+.|+++ .||+||+|+||+|+|++...
T Consensus 170 l~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~ 205 (269)
T d1xu9a_ 170 LDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMK 205 (269)
T ss_dssp HHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHH
T ss_pred HHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHH
Confidence 99999999999975 57999999999999998654
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=1.7e-41 Score=278.93 Aligned_cols=223 Identities=22% Similarity=0.232 Sum_probs=181.6
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
|+.|+||||||++|||+++|++|+++|+ +|++.+|+.++++++.+ ..+.++.++.+|++++++++++++++.+.+
T Consensus 1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~---~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~ 77 (250)
T d1yo6a1 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS---IKDSRVHVLPLTVTCDKSLDTFVSKVGEIV 77 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT---CCCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHH---hhCCceEEEEEecCCHHHHHHHHHHHHHHh
Confidence 4569999999999999999999999996 69999999988776543 235679999999999999999999999887
Q ss_pred CC-CccEEEeCCCCCCC-CCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-----------CceEEEEccccccc
Q 024752 89 DG-KLNILINNAGTFIP-KETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-----------NGNIIFISSVAGVI 155 (263)
Q Consensus 89 ~~-~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----------~~~iv~vsS~~~~~ 155 (263)
+. ++|+||||||+... .++.+.+.++|++.|++|+.|+++++++++|+|++++ .+++++++|.....
T Consensus 78 ~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~ 157 (250)
T d1yo6a1 78 GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSI 157 (250)
T ss_dssp GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCS
T ss_pred CCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccc
Confidence 32 49999999998755 6778899999999999999999999999999998642 37899998876654
Q ss_pred cC-------CCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCC
Q 024752 156 AI-------PMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGE 228 (263)
Q Consensus 156 ~~-------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (263)
.. .+..+|++||+|+.+|+++++.|++++||+||+|+||+|+|+|..... ..+
T Consensus 158 ~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~~--------------------~~~ 217 (250)
T d1yo6a1 158 TDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNA--------------------ALT 217 (250)
T ss_dssp TTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------------------------------
T ss_pred cCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCCC--------------------CCC
Confidence 32 234569999999999999999999999999999999999999864311 135
Q ss_pred hhhHHHHHHHHcCCCCCCccCcEEEeCC
Q 024752 229 PNEVSSVVAFLCLSATSYVTGQVICVDG 256 (263)
Q Consensus 229 ~~~va~~~~~l~s~~~~~~~G~~i~~dg 256 (263)
|+|.++.++.++.......+|+++..||
T Consensus 218 ~e~~a~~~~~~~~~~~~~~sG~f~~~~g 245 (250)
T d1yo6a1 218 VEQSTAELISSFNKLDNSHNGRFFMRNL 245 (250)
T ss_dssp -HHHHHHHHHHHTTCCGGGTTCEEETTE
T ss_pred HHHHHHHHHHHHhcCCCCCCeEEECCCC
Confidence 8898888888777666678999998885
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=100.00 E-value=1.5e-40 Score=274.20 Aligned_cols=220 Identities=30% Similarity=0.397 Sum_probs=170.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
|+||||||++|||+++|++|+++|++|++++|++++ ..+|+++.+.......++..+..+.+|
T Consensus 2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-----------------~~~d~~~~~~~~~~~~~~~~~~~~~id 64 (257)
T d1fjha_ 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-----------------VIADLSTAEGRKQAIADVLAKCSKGMD 64 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-----------------EECCTTSHHHHHHHHHHHHTTCTTCCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-----------------HHHHhcCHHHHHHHHHHHHHHhCCCCc
Confidence 899999999999999999999999999999997642 357999999998887777766546899
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccc------------------
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVI------------------ 155 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~------------------ 155 (263)
+++||||+.... +.+.+...+|..+...+.+...+.+.+.....+.++.+.....
T Consensus 65 ~lv~~Ag~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 137 (257)
T d1fjha_ 65 GLVLCAGLGPQT-------KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEA 137 (257)
T ss_dssp EEEECCCCCTTC-------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHH
T ss_pred EEEEcCCCCCcH-------HHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEE
Confidence 999999975432 4477889999999999999999998877666666666543321
Q ss_pred ---------cC-CCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCC
Q 024752 156 ---------AI-PMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLR 225 (263)
Q Consensus 156 ---------~~-~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (263)
+. ++..+|++||+|+++|+|+++.||+++|||||+|+||+++|++......++...+ .......|++|
T Consensus 138 ~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~--~~~~~~~PlgR 215 (257)
T d1fjha_ 138 KARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGE--SIAKFVPPMGR 215 (257)
T ss_dssp HHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----------------------CCCSTTS
T ss_pred EEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHH--HHHhcCCCCCC
Confidence 11 1234699999999999999999999999999999999999999876554443321 11223469999
Q ss_pred CCChhhHHHHHHHHcCCCCCCccCcEEEeCCCcc
Q 024752 226 PGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYS 259 (263)
Q Consensus 226 ~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~ 259 (263)
+++|+||++++.||+|+.++++|||.|.+|||++
T Consensus 216 ~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG~t 249 (257)
T d1fjha_ 216 RAEPSEMASVIAFLMSPAASYVHGAQIVIDGGID 249 (257)
T ss_dssp CCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHH
T ss_pred CcCHHHHHHHHHHHhCchhCCccCceEEeCCCcc
Confidence 9999999999999999999999999999999986
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=2.8e-40 Score=269.21 Aligned_cols=222 Identities=17% Similarity=0.176 Sum_probs=185.1
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc-CCC
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF-DGK 91 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~ 91 (263)
.++||||||++|||+++|++|+++|++|++++|++... ......+.+|..+.+......+.+...+ .++
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 71 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ----------ADSNILVDGNKNWTEQEQSILEQTASSLQGSQ 71 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT----------SSEEEECCTTSCHHHHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc----------ccccceeccccCchhHHHHHHHHHHHHhcCCC
Confidence 35679999999999999999999999999999987531 1234556788888888888777777743 378
Q ss_pred ccEEEeCCCCCCCC-CCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHH
Q 024752 92 LNILINNAGTFIPK-ETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAM 170 (263)
Q Consensus 92 id~li~~ag~~~~~-~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~ 170 (263)
||+||||||+.... +..+.+.+.|+.++++|+.+++.++++++|+|++ +|+||++||..+..+.|+..+|++||+|+
T Consensus 72 iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaal 149 (235)
T d1ooea_ 72 VDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPTPSMIGYGMAKAAV 149 (235)
T ss_dssp EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHH
T ss_pred eeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhccccccc--ceEEEEeccHHhcCCcccccchHHHHHHH
Confidence 99999999987653 4455567889999999999999999999999976 58999999999999999999999999999
Q ss_pred HHHHHHHHHHHc--cCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHH-HHcCCCCCCc
Q 024752 171 NQLTKNLACEWA--KDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVA-FLCLSATSYV 247 (263)
Q Consensus 171 ~~~~~~~a~e~~--~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~-~l~s~~~~~~ 247 (263)
++|+++++.|++ +.+|+||+|+||+++|++.+...++. +..++.+|+++++.++ |+.++..+++
T Consensus 150 ~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~~~-------------~~~~~~~~~~va~~~~~~l~~~~~~~~ 216 (235)
T d1ooea_ 150 HHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPNA-------------DHSSWTPLSFISEHLLKWTTETSSRPS 216 (235)
T ss_dssp HHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTTC-------------CGGGCBCHHHHHHHHHHHHHCGGGCCC
T ss_pred HHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCcCC-------------ccccCCCHHHHHHHHHHHhcCccccCC
Confidence 999999999998 47999999999999999876544322 2235568999999986 5666677889
Q ss_pred cCcEEEe---CCCcc
Q 024752 248 TGQVICV---DGGYS 259 (263)
Q Consensus 248 ~G~~i~~---dgG~~ 259 (263)
||+.|.+ ||+.+
T Consensus 217 tG~~i~v~~~~g~~~ 231 (235)
T d1ooea_ 217 SGALLKITTENGTST 231 (235)
T ss_dssp TTCEEEEEEETTEEE
T ss_pred CceEEEEEeeCCEEE
Confidence 9999998 66544
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=100.00 E-value=3.6e-33 Score=230.09 Aligned_cols=212 Identities=20% Similarity=0.208 Sum_probs=171.4
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCc---hhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNE---TELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
++++|||||++|||+++|++|+++|+ +|++++|+. +..++..+++...+.++.++.||++|+++++++++++.+.
T Consensus 9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~- 87 (259)
T d2fr1a1 9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD- 87 (259)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT-
T ss_pred cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc-
Confidence 46999999999999999999999999 588899864 4566777888888889999999999999999999988665
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+++|.+|||+|.....++.+.+.++|++.+++|+.+++++.+.+ ...+.++||++||+.+..+.++...|+++|+
T Consensus 88 -~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~----~~~~~~~iv~~SS~a~~~g~~~~~~YaAaka 162 (259)
T d2fr1a1 88 -VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELT----RELDLTAFVLFSSFASAFGAPGLGGYAPGNA 162 (259)
T ss_dssp -SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHH----TTSCCSEEEEEEEHHHHTCCTTCTTTHHHHH
T ss_pred -ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHh----hccCCceEeeecchhhccCCcccHHHHHHHH
Confidence 58999999999999999999999999999999999999988765 4556789999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCC
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 243 (263)
++++|++.++ ..|+++++|+||.+.++........ .++. ..-....+|+++++++..++...
T Consensus 163 ~l~~la~~~~----~~Gi~v~~I~pg~~~~~g~~~~~~~-------~~~~--~~G~~~~~~~~~~~~l~~~l~~~ 224 (259)
T d2fr1a1 163 YLDGLAQQRR----SDGLPATAVAWGTWAGSGMAEGPVA-------DRFR--RHGVIEMPPETACRALQNALDRA 224 (259)
T ss_dssp HHHHHHHHHH----HTTCCCEEEEECCBC-------------------CT--TTTEECBCHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHH----hCCCCEEECCCCcccCCccccchHH-------HHHH--hcCCCCCCHHHHHHHHHHHHhCC
Confidence 9998877654 4599999999999876543221111 1110 01112457999999987766543
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.92 E-value=1.6e-23 Score=179.56 Aligned_cols=229 Identities=13% Similarity=0.025 Sum_probs=160.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCch-----hHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET-----ELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
|+||||||+|.||++++++|++.|++|++++|... +.+....+......++.++.+|++|.+++.++++.+
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---- 77 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH----
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc----
Confidence 89999999999999999999999999999999543 333333333334567899999999999999998753
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccc-----------cC
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVI-----------AI 157 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-----------~~ 157 (263)
.+|+++|+|+...... +.++.+..+++|+.|+.++++++...- .++..++|++||...+. +.
T Consensus 78 --~~d~v~h~aa~~~~~~----~~~~~~~~~~~Nv~gt~nllea~~~~~-~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~ 150 (357)
T d1db3a_ 78 --QPDEVYNLGAMSHVAV----SFESPEYTADVDAMGTLRLLEAIRFLG-LEKKTRFYQASTSELYGLVQEIPQKETTPF 150 (357)
T ss_dssp --CCSEEEECCCCCTTTT----TTSCHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGGTTCCSSSBCTTSCC
T ss_pred --CCCEEEEeecccccch----hhhCHHHHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEEEchhhhCCCCCCCcCCCCCC
Confidence 6899999999876543 345567789999999999999984432 12346899999976431 11
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCC----------CCCCC
Q 024752 158 PMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTP----------MLRPG 227 (263)
Q Consensus 158 ~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 227 (263)
.+...|+.||.+.|.+++.++..+ |+.+..++|+.+..|..........+...........+ ...+.
T Consensus 151 ~P~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~ 227 (357)
T d1db3a_ 151 YPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWG 227 (357)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCE
T ss_pred CCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecce
Confidence 235679999999999999988776 79999999999999865433222222222222221111 12356
Q ss_pred ChhhHHHHHHHHcCCCCCCccCcEEEeCCCccc
Q 024752 228 EPNEVSSVVAFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 228 ~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
.++|+++++..++... .|+.+++.+|..+
T Consensus 228 ~v~D~~~a~~~~~~~~----~~~~yni~sg~~~ 256 (357)
T d1db3a_ 228 HAKDYVKMQWMMLQQE----QPEDFVIATGVQY 256 (357)
T ss_dssp EHHHHHHHHHHTTSSS----SCCCEEECCCCCE
T ss_pred eechHHHHHHHHHhCC----CCCeEEECCCCce
Confidence 7999999987665432 4788899888764
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.85 E-value=2.4e-20 Score=158.25 Aligned_cols=231 Identities=15% Similarity=0.067 Sum_probs=159.4
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHH-hcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWK-SKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
+||||||+|.||+++++.|+++|++|++++|............. ....++.++++|++|.+.+.++++. .++|
T Consensus 2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~------~~~d 75 (338)
T d1udca_ 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHD------HAID 75 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHH------TTCS
T ss_pred EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhc------cCCC
Confidence 59999999999999999999999999999874332222222221 1234688999999999999888874 4799
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC------------CCCc
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI------------PMCS 161 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~------------~~~~ 161 (263)
+|||+|+....+. +.++..+.+++|+.|+.++++++ ++.+-.++|++||...+.+. .+..
T Consensus 76 ~ViHlAa~~~~~~----~~~~~~~~~~~Nv~gt~nlL~~~----~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~ 147 (338)
T d1udca_ 76 TVIHFAGLKAVGE----SVQKPLEYYDNNVNGTLRLISAM----RAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQS 147 (338)
T ss_dssp EEEECCSCCCHHH----HHHCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSS
T ss_pred EEEECCCccchhh----HHhCHHHHHHhHHHHHHHHHHHH----HHhCCCEEEecCcceEEccccccccccccccCCCcc
Confidence 9999999753322 34566789999999999999998 44445799999998765321 2356
Q ss_pred chhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccc------cchhHHHHHHhH-h-cCCC----------
Q 024752 162 IYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEK------DSNFLEHANRMV-L-RTPM---------- 223 (263)
Q Consensus 162 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~------~~~~~~~~~~~~-~-~~~~---------- 223 (263)
.|+.+|.+.+.+++....+. .++.+..++|+.+..+..+.... ...+........ . ..+.
T Consensus 148 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~ 225 (338)
T d1udca_ 148 PYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTE 225 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSST
T ss_pred hHHHHHhhhhHHHHHHHhhc--cCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccC
Confidence 79999999999998877664 37899999999998875432211 111221111111 1 1110
Q ss_pred -----CCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 224 -----LRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 224 -----~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
..+...+|++.+...+.........++.+++.++..++
T Consensus 226 ~g~~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~s 268 (338)
T d1udca_ 226 DGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNS 268 (338)
T ss_dssp TSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEE
T ss_pred CCCceeeEEEEeehhhhccccccccccccCcceeeecCCCCCc
Confidence 11345788887766544333333457899999887543
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=99.85 E-value=1.3e-22 Score=158.89 Aligned_cols=156 Identities=14% Similarity=0.083 Sum_probs=116.5
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
...|++||+++||||++|||+++++.|+++|++|++++|+.++++++.+++... .++....+|+++.+++++++
T Consensus 17 ~~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~----- 90 (191)
T d1luaa1 17 AGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAV----- 90 (191)
T ss_dssp TTSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHT-----
T ss_pred cCCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhc-cchhhhhhhcccHHHHHHHh-----
Confidence 357899999999999999999999999999999999999999999998888654 23456789999999887765
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc-CCCCcchhh
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA-IPMCSIYAS 165 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-~~~~~~Y~~ 165 (263)
+++|+||||||+.. ...+.|.|++.+++|+.+.++....+.+.+..... ....+++...... ..+...|..
T Consensus 91 ---~~iDilin~Ag~g~----~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~g~~~y~~ 162 (191)
T d1luaa1 91 ---KGAHFVFTAGAIGL----ELLPQAAWQNESSIEIVADYNAQPPLGIGGIDATD-KGKEYGGKRAFGALGIGGLKLKL 162 (191)
T ss_dssp ---TTCSEEEECCCTTC----CCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTTC-EEEEETTEEEECHHHHHHHHHHH
T ss_pred ---cCcCeeeecCcccc----ccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhcc-CcEEecceEEEeccCcCcHHHHH
Confidence 67999999999743 34589999999999998888766555433332221 2222222221111 012346999
Q ss_pred HHHHHHHHHHH
Q 024752 166 SKVAMNQLTKN 176 (263)
Q Consensus 166 sK~a~~~~~~~ 176 (263)
+|+++..++++
T Consensus 163 sk~a~~~l~~s 173 (191)
T d1luaa1 163 HRACIAKLFES 173 (191)
T ss_dssp HHHHHHHHTSC
T ss_pred HHHHHHHHHhc
Confidence 99999877653
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.84 E-value=1.8e-20 Score=160.65 Aligned_cols=226 Identities=15% Similarity=0.085 Sum_probs=159.3
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCe-EEEeeCCchhHH-HHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGAI-VHTCSRNETELN-QRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~~-V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
+||||||+|.||++|+++|++.|+. |+++++...... +....+ ....++.++.+|++|.+.+.++++. .++
T Consensus 2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~l~~~~~~------~~~ 74 (361)
T d1kewa_ 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDI-SESNRYNFEHADICDSAEITRIFEQ------YQP 74 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTT-TTCTTEEEEECCTTCHHHHHHHHHH------HCC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhh-hhcCCcEEEEccCCCHHHHHHHHHh------CCC
Confidence 6899999999999999999999997 455554322110 111111 1234688999999999999888764 279
Q ss_pred cEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-----CCceEEEEccccccccC----------
Q 024752 93 NILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-----GNGNIIFISSVAGVIAI---------- 157 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~vsS~~~~~~~---------- 157 (263)
|+|||+|+...... +.++..+.+++|+.|+.++++.+....... +..++|++||...+...
T Consensus 75 d~VihlAa~~~~~~----~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~ 150 (361)
T d1kewa_ 75 DAVMHLAAESHVDR----SITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSV 150 (361)
T ss_dssp SEEEECCSCCCHHH----HHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTS
T ss_pred CEEEECccccchhh----HHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCcccccc
Confidence 99999999754322 345567789999999999999997765432 24699999997755311
Q ss_pred -----------CCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCC---
Q 024752 158 -----------PMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPM--- 223 (263)
Q Consensus 158 -----------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--- 223 (263)
.+...|+.+|.+.+.+++.++..+ |+++..++|+.|..|..... ..+.....+.....|.
T Consensus 151 ~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~---~i~~~~lR~~~vyGp~~~~~---~~i~~~i~~~~~g~~~~v~ 224 (361)
T d1kewa_ 151 TLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPE---KLIPLVILNALEGKPLPIY 224 (361)
T ss_dssp CCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTT---SHHHHHHHHHHHTCCEEEE
T ss_pred CCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEecCceECcCCCcC---cHHHHHHHHHHcCCCcEEe
Confidence 123459999999999999998776 89999999999998754321 1112222333333222
Q ss_pred ------CCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCccc
Q 024752 224 ------LRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 224 ------~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
..+...+|+++++..++.... .|..+++.+|...
T Consensus 225 g~g~~~r~~i~v~D~a~ai~~~~~~~~---~~~~~Ni~s~~~~ 264 (361)
T d1kewa_ 225 GKGDQIRDWLYVEDHARALHMVVTEGK---AGETYNIGGHNEK 264 (361)
T ss_dssp TTSCCEEEEEEHHHHHHHHHHHHHHCC---TTCEEEECCCCEE
T ss_pred CCCCeEEeCEEHHHHHHHHHHHHhcCC---CCCeEEECCCCCc
Confidence 124578999999887775433 3789999888654
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.83 E-value=8.8e-19 Score=151.41 Aligned_cols=176 Identities=14% Similarity=0.133 Sum_probs=130.9
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc----------------hhHHHHHHHHHh-cCCceEEEeccCCCHH
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE----------------TELNQRIQEWKS-KGLQVSGSVCDLKIRA 75 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~----------------~~~~~~~~~~~~-~~~~~~~~~~D~~~~~ 75 (263)
||+||||||+|.||.+++++|++.|++|+++|.-. ....+....+.. .+.++.++.+|++|.+
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~ 80 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE 80 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence 78999999999999999999999999999987311 111222222222 2456899999999999
Q ss_pred HHHHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccc
Q 024752 76 QREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVI 155 (263)
Q Consensus 76 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~ 155 (263)
.++++++.. ++|+|+|.|+..... ....+.+.....+.+|+.|+.++++++... +...++++.||.....
T Consensus 81 ~l~~~~~~~------~~d~ViHlAa~~~~~-~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~---~~~~~~i~~ss~~~~~ 150 (393)
T d1i24a_ 81 FLAESFKSF------EPDSVVHFGEQRSAP-YSMIDRSRAVYTQHNNVIGTLNVLFAIKEF---GEECHLVKLGTMGEYG 150 (393)
T ss_dssp HHHHHHHHH------CCSEEEECCSCCCHH-HHTSCHHHHHHHHHHHHHHHHHHHHHHHHH---CTTCEEEEECCGGGGC
T ss_pred HHHHHHHhh------cchheeccccccccc-cccccccccccccccccccccHHHHHHHHh---ccccceeecccccccc
Confidence 999988753 799999999975432 122356777889999999999999988332 2234666666655432
Q ss_pred c------------------------CCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcc
Q 024752 156 A------------------------IPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLL 201 (263)
Q Consensus 156 ~------------------------~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~ 201 (263)
. ..+...|+.+|.+.|.+++.++.++ |+++..++|+.+..+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---~l~~~~lR~~~v~G~~~ 217 (393)
T d1i24a_ 151 TPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVKT 217 (393)
T ss_dssp CCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSCC
T ss_pred ccccccccccccccccccccccccccccccHHHHHhhhhccccccccccc---ceeeeecccccccCCCc
Confidence 1 1123469999999999999887776 89999999999987654
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.82 E-value=7.3e-19 Score=149.28 Aligned_cols=226 Identities=15% Similarity=0.131 Sum_probs=154.1
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHh--cCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS--KGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
.+||+||||||+|.||+++++.|+++|++|+++.|+..+...+...... .......+..|+++.+++..++
T Consensus 9 ~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~------- 81 (342)
T d1y1pa1 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI------- 81 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT-------
T ss_pred CCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhc-------
Confidence 4599999999999999999999999999999999998776665544332 2334556778999988776655
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCC----------
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIP---------- 158 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~---------- 158 (263)
...|+++|+++..... .+ ....+..|+.|+.++++.+... .+..++|++||..+.....
T Consensus 82 -~~~~~v~~~a~~~~~~----~~---~~~~~~~nv~gt~~ll~~~~~~---~~v~~~i~~SS~~~~~~~~~~~~~~~~~e 150 (342)
T d1y1pa1 82 -KGAAGVAHIASVVSFS----NK---YDEVVTPAIGGTLNALRAAAAT---PSVKRFVLTSSTVSALIPKPNVEGIYLDE 150 (342)
T ss_dssp -TTCSEEEECCCCCSCC----SC---HHHHHHHHHHHHHHHHHHHHTC---TTCCEEEEECCGGGTCCCCTTCCCCEECT
T ss_pred -ccchhhhhhccccccc----cc---ccccccchhhhHHHHHHhhhcc---cccccccccccceeeccCCCCCCCccccc
Confidence 3689999999965322 12 3456788999999999987332 2357999999976432111
Q ss_pred ---------------------CCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHh
Q 024752 159 ---------------------MCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRM 217 (263)
Q Consensus 159 ---------------------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~ 217 (263)
+...|+.+|.+.+.+++.+++++.. ++++..++|+.+..|..................
T Consensus 151 ~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~-~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l 229 (342)
T d1y1pa1 151 KSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSL 229 (342)
T ss_dssp TCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCSCTTTCCCHHHHHHHHH
T ss_pred cccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhccc-ccccceecccceeCCCCCccccccchHHHHHHH
Confidence 1235999999999999999887754 689999999998877543322222222111111
Q ss_pred Hh--------cCCCCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCC
Q 024752 218 VL--------RTPMLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGG 257 (263)
Q Consensus 218 ~~--------~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG 257 (263)
.. ..+...+..++|+|++++..+... ...|+.+...++
T Consensus 230 ~~g~~~~~~~~~~~~~~v~v~Dva~~~i~~l~~~--~~~g~~~~~~~~ 275 (342)
T d1y1pa1 230 FNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLP--QIERRRVYGTAG 275 (342)
T ss_dssp HTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCT--TCCSCEEEECCE
T ss_pred HcCCcCcccCCccceeeeeHHHHHHHHHHhhcCc--cccceEEEEcCC
Confidence 11 112233567899999966444221 234666544443
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.82 E-value=5.5e-19 Score=149.88 Aligned_cols=231 Identities=12% Similarity=0.021 Sum_probs=163.4
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHH-----hcCCceEEEeccCCCHHHHHHHHHHH
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWK-----SKGLQVSGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~~~D~~~~~~~~~~~~~~ 84 (263)
-++-|++|||||+|.||++++++|.++|++|++++|...........+. .....+.++.+|+.|........
T Consensus 13 ~~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~--- 89 (341)
T d1sb8a_ 13 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC--- 89 (341)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH---
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccc---
Confidence 3556899999999999999999999999999999874322111111111 11345888999999988765543
Q ss_pred HhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC-------
Q 024752 85 SSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI------- 157 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~------- 157 (263)
...+.++|.++...... +.++....+++|+.|+.++++++ .+.+..++|++||...+...
T Consensus 90 -----~~~~~v~~~~a~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~E 156 (341)
T d1sb8a_ 90 -----AGVDYVLHQAALGSVPR----SINDPITSNATNIDGFLNMLIAA----RDAKVQSFTYAASSSTYGDHPGLPKVE 156 (341)
T ss_dssp -----TTCSEEEECCSCCCHHH----HHHCHHHHHHHHTHHHHHHHHHH----HHTTCSEEEEEEEGGGGTTCCCSSBCT
T ss_pred -----ccccccccccccccccc----cccCccchhheeehhHHHHHHHH----HhcCCceEEEcccceeeCCCCCCCccC
Confidence 46788998888654322 46777889999999999999998 45555799999998765321
Q ss_pred ----CCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchh-HHHHHHhHhcCCC---------
Q 024752 158 ----PMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNF-LEHANRMVLRTPM--------- 223 (263)
Q Consensus 158 ----~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~--------- 223 (263)
.+...|+.+|.+.|.+++.+++.+ ++++..++|+.+.++..........+ ...........|.
T Consensus 157 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~ 233 (341)
T d1sb8a_ 157 DTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETS 233 (341)
T ss_dssp TCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCE
T ss_pred CCCCCCCCcchHHHHHHHHHHHHHHHHh---CCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEE
Confidence 234679999999999999988776 79999999999988765433322222 2222333322222
Q ss_pred CCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCccc
Q 024752 224 LRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 224 ~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
..+..++|++.++..+..... ...|+.+++.++...
T Consensus 234 r~~i~v~D~~~a~~~~~~~~~-~~~~~~~~~~~~~~~ 269 (341)
T d1sb8a_ 234 RDFCYIENTVQANLLAATAGL-DARNQVYNIAVGGRT 269 (341)
T ss_dssp ECCEEHHHHHHHHHHHHTCCG-GGCSEEEEESCSCCE
T ss_pred EEEEEEeccchhhhhhhhccc-cccceeeeecccccc
Confidence 235667999999876654332 356888888877544
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.82 E-value=1.8e-19 Score=151.47 Aligned_cols=226 Identities=14% Similarity=0.041 Sum_probs=154.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHH-HHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELN-QRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
|+||||||+|.||++++++|+++|++|+.++|...... ...+++. ...++.++.+|++|.+.+.+.+... ..
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~------~~ 73 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKA------QP 73 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHH------CC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhc-ccCCcEEEEccccChHHhhhhhccc------cc
Confidence 78999999999999999999999999999998754311 1122221 2346889999999999988887753 67
Q ss_pred cEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccc-----------cCCCCc
Q 024752 93 NILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVI-----------AIPMCS 161 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-----------~~~~~~ 161 (263)
++++++|+...... ..+.....++.|+.|+.+++.++... ....++++.||..... +..+..
T Consensus 74 ~~~~~~a~~~~~~~----~~~~~~~~~~~n~~g~~~~l~~~~~~---~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~ 146 (321)
T d1rpna_ 74 QEVYNLAAQSFVGA----SWNQPVTTGVVDGLGVTHLLEAIRQF---SPETRFYQASTSEMFGLIQAERQDENTPFYPRS 146 (321)
T ss_dssp SEEEECCSCCCHHH----HTTSHHHHHHHHTHHHHHHHHHHHHH---CTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCS
T ss_pred cccccccccccccc----cccchHHHHhhhhhchHHHHHHHHHh---CCCcccccccchhhcCcccCCCCCCCCCccccC
Confidence 88888887654322 22445778999999999999988332 2234666666654321 112446
Q ss_pred chhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHh-cCC---------CCCCCChhh
Q 024752 162 IYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVL-RTP---------MLRPGEPNE 231 (263)
Q Consensus 162 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~---------~~~~~~~~~ 231 (263)
.|+.+|.+.+.+++.++.++ ++++..+.|+.+..|..........+.....+... ..+ ...+...+|
T Consensus 147 ~Y~~sK~~~E~~~~~~~~~~---~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D 223 (321)
T d1rpna_ 147 PYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGD 223 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHH
T ss_pred hhHHHHHHHHHHHHHHHhhc---CCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHH
Confidence 79999999999999988776 78999999999988764332221122222122111 111 113567899
Q ss_pred HHHHHHHHcCCCCCCccCcEEEeCCCccc
Q 024752 232 VSSVVAFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 232 va~~~~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
+++++..++.... +..+++.+|...
T Consensus 224 ~~~~~~~~~~~~~----~~~~ni~~~~~~ 248 (321)
T d1rpna_ 224 YVEAMWLMLQQDK----ADDYVVATGVTT 248 (321)
T ss_dssp HHHHHHHHHHSSS----CCCEEECCSCEE
T ss_pred HHHHHHHHHhcCC----cCCceecccccc
Confidence 9999987765332 455777777543
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.81 E-value=1.7e-18 Score=147.25 Aligned_cols=172 Identities=19% Similarity=0.094 Sum_probs=130.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhH-HHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETEL-NQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
|+||||||+|.||++++++|+++|++|+++++..... +.....-.....++.++.+|++|.++++.++.. .++
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~------~~~ 75 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKE------YKI 75 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHH------SCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhc------cCC
Confidence 7999999999999999999999999999987643221 111111111234678889999999999998864 379
Q ss_pred cEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc---------------C
Q 024752 93 NILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA---------------I 157 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~---------------~ 157 (263)
|+|||+|+...... ..+.....+.+|+.++.++++++ ++.+..++|++||...+.. .
T Consensus 76 d~VihlAa~~~~~~----~~~~~~~~~~~N~~~t~~ll~~~----~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~ 147 (347)
T d1z45a2 76 DSVIHFAGLKAVGE----STQIPLRYYHNNILGTVVLLELM----QQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPL 147 (347)
T ss_dssp CEEEECCSCCCHHH----HHHSHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCC
T ss_pred CEEEEccccccccc----cccCcccccccchhhhHHHHHHH----HhcccceEEeecceeeecCcccCCCCCccccccCC
Confidence 99999999764322 34455778899999999999998 4444569999999776531 1
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCc
Q 024752 158 PMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPL 200 (263)
Q Consensus 158 ~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~ 200 (263)
.+...|+.+|.+.|.+++.+.... ..++.+..++|+.+..+.
T Consensus 148 ~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~~lR~~~v~g~~ 189 (347)
T d1z45a2 148 GPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGAH 189 (347)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECCC
T ss_pred CCCChhHhHHHHHHHHHHHHHHhh-ccCCcEEEEeecceEeec
Confidence 134569999999999999887543 347888899988877654
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.81 E-value=1e-18 Score=149.33 Aligned_cols=228 Identities=15% Similarity=0.089 Sum_probs=161.1
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
.+=|.-++++||||||+|.||++|+++|.++|+.|++++|...... ...-....+..+|+.+.+.+.+++
T Consensus 8 ~~~~~~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~------~~~~~~~~~~~~D~~~~~~~~~~~---- 77 (363)
T d2c5aa1 8 EQYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM------TEDMFCDEFHLVDLRVMENCLKVT---- 77 (363)
T ss_dssp CCSCTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS------CGGGTCSEEEECCTTSHHHHHHHH----
T ss_pred cCcCCCCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch------hhhcccCcEEEeechhHHHHHHHh----
Confidence 3445557889999999999999999999999999999987543210 001123467788999988776655
Q ss_pred hhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC--------
Q 024752 86 SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI-------- 157 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-------- 157 (263)
..+|.+||.|+....... ..+.....+..|+.++.+++.++ ++.+..++|++||...+...
T Consensus 78 ----~~~d~Vih~a~~~~~~~~---~~~~~~~~~~~n~~gt~~ll~~~----~~~~vk~~i~~SS~~~~~~~~~~~~~~~ 146 (363)
T d2c5aa1 78 ----EGVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMIEAA----RINGIKRFFYASSACIYPEFKQLETTNV 146 (363)
T ss_dssp ----TTCSEEEECCCCCCCHHH---HTTCHHHHHHHHHHHHHHHHHHH----HHTTCSEEEEEEEGGGSCGGGSSSSSSC
T ss_pred ----hcCCeEeecccccccccc---cccccccccccccchhhHHHHhH----HhhCcccccccccccccccccccccccc
Confidence 368999999987654221 13446778899999999999998 55566799999997765321
Q ss_pred ----------CCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHH--HHHHhHhcC----
Q 024752 158 ----------PMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLE--HANRMVLRT---- 221 (263)
Q Consensus 158 ----------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~--~~~~~~~~~---- 221 (263)
.+...|+.+|.+.+.+++.+.+++ |+++..++|+.+..+............. .........
T Consensus 147 ~~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (363)
T d2c5aa1 147 SLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEM 223 (363)
T ss_dssp EECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEE
T ss_pred ccccccCCcCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEeccCCcccccccccccccccccccccccccc
Confidence 234579999999999999988777 8999999999999875433222111111 111111111
Q ss_pred -----CCCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 222 -----PMLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 222 -----~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
....+...+|+++++..+.... .|+.+++.+|..++
T Consensus 224 ~g~g~~~rd~i~v~D~~~~~~~~~~~~----~~~~~ni~~~~~~s 264 (363)
T d2c5aa1 224 WGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS 264 (363)
T ss_dssp ESCSCCEECCEEHHHHHHHHHHHHHSS----CCSCEEECCCCCEE
T ss_pred cCCCCeEEEEeehhHHHHHHHHHHhCC----CCCeEEEecCCccc
Confidence 1234677899999988877533 37789998887653
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.81 E-value=1.4e-18 Score=146.44 Aligned_cols=225 Identities=12% Similarity=0.045 Sum_probs=150.2
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchh-HHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE-LNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
+||||||+|.||+++++.|+++|++|+++++-... ..+....+. ...++.++.+|+++.+++.++++.. ++|
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~-~~~~~~~i~~Di~~~~~l~~~~~~~------~~d 74 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLS-SLGNFEFVHGDIRNKNDVTRLITKY------MPD 74 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHHH------CCS
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhh-ccCCcEEEEcccCCHHHHHHHHHhc------CCc
Confidence 58999999999999999999999999998753222 222222332 2456889999999999999888743 689
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC----------------
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI---------------- 157 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~---------------- 157 (263)
++||+|+...... ..++....+++|+.|+.++++++ .+.+..+.++.||.....+.
T Consensus 75 ~Vih~aa~~~~~~----~~~~~~~~~~~Nv~gt~nll~~~----~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~ 146 (338)
T d1orra_ 75 SCFHLAGQVAMTT----SIDNPCMDFEINVGGTLNLLEAV----RQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCV 146 (338)
T ss_dssp EEEECCCCCCHHH----HHHCHHHHHHHHHHHHHHHHHHH----HHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEET
T ss_pred eEEeecccccccc----cccChHHHHHHHHHHHHHHHHhh----hccccccccccccccccccccccccccccccccccc
Confidence 9999999764322 34556889999999999999987 44455666666665543321
Q ss_pred ------------CCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHh---Hh--c
Q 024752 158 ------------PMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRM---VL--R 220 (263)
Q Consensus 158 ------------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~---~~--~ 220 (263)
.+...|+.+|...+.+.......+ ++....+.|..+..+.................. .. .
T Consensus 147 ~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (338)
T d1orra_ 147 DKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGIN 223 (338)
T ss_dssp TCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCC
T ss_pred ccccCcccCCccccccccccccchhhhhhhhhhhcc---CcccccccccceeeccccccccccccchhhHHHHHHHhccC
Confidence 134569999999999999888877 566666666555544332222211111111111 10 1
Q ss_pred CC---------CCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCc
Q 024752 221 TP---------MLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGY 258 (263)
Q Consensus 221 ~~---------~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~ 258 (263)
.+ ...+...+|++++++.++.. .....|+.+++.+|.
T Consensus 224 ~~~~~~g~g~~~r~~~~v~D~~~~~~~~l~~-~~~~~~~~~~i~~~~ 269 (338)
T d1orra_ 224 KPFTISGNGKQVRDVLHAEDMISLYFTALAN-VSKIRGNAFNIGGTI 269 (338)
T ss_dssp CCEEEESSSCCEEECEEHHHHHHHHHHHHHT-HHHHTTCEEEESSCG
T ss_pred CceEEeCCCceeEeeecccchhhHHHHHHhc-cccccCccccccccc
Confidence 11 11245688999998776532 234568888887654
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.80 E-value=1.4e-18 Score=147.54 Aligned_cols=215 Identities=12% Similarity=-0.029 Sum_probs=147.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCch-----hHHHHHHHHH-hcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET-----ELNQRIQEWK-SKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~-----~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
|++|||||+|.||++++++|.++|++|+.++|... ..+.+..... ....++.++.+|++|.+.+.+++..
T Consensus 2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 77 (347)
T d1t2aa_ 2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINE---- 77 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHH----
T ss_pred CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhh----
Confidence 44599999999999999999999999999999643 2222222211 1234688999999999999998875
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc-----------
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA----------- 156 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~----------- 156 (263)
..+++++|.++...... +.+.....+++|+.|+.+++.++...-.. +..++|++||.+.+..
T Consensus 78 --~~~~~v~~~~a~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~E~~~ 150 (347)
T d1t2aa_ 78 --VKPTEIYNLGAQSHVKI----SFDLAEYTADVDGVGTLRLLDAVKTCGLI-NSVKFYQASTSELYGKVQEIPQKETTP 150 (347)
T ss_dssp --HCCSEEEECCSCCCHHH----HHHSHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGTCSCSSSSBCTTSC
T ss_pred --cccceeeeeeeccccch----hhccchhhhhhHHHHHHHHHHHHHHcCCC-CCcEEEEecchheecCCCCCCCCCCCC
Confidence 36889999988654332 45666777899999999999988544222 2358999998765421
Q ss_pred CCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHH-HHhHhcCC---------CCCC
Q 024752 157 IPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHA-NRMVLRTP---------MLRP 226 (263)
Q Consensus 157 ~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~-~~~~~~~~---------~~~~ 226 (263)
..+...|+.||.+.|.+++.++..+ ++.+..++|+.++.|............... .......+ ...+
T Consensus 151 ~~P~~~Yg~sK~~aE~~~~~~~~~~---~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~ 227 (347)
T d1t2aa_ 151 FYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDW 227 (347)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeee
Confidence 1234569999999999999987775 789999999999887543322211111111 11111111 1235
Q ss_pred CChhhHHHHHHHHcCC
Q 024752 227 GEPNEVSSVVAFLCLS 242 (263)
Q Consensus 227 ~~~~~va~~~~~l~s~ 242 (263)
...+|+++++..++..
T Consensus 228 i~v~D~~~a~~~~~~~ 243 (347)
T d1t2aa_ 228 GHAKDYVEAMWLMLQN 243 (347)
T ss_dssp EEHHHHHHHHHHHHHS
T ss_pred eEecHHHHHHHHHhhc
Confidence 6789999999876653
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.80 E-value=2e-18 Score=145.89 Aligned_cols=217 Identities=15% Similarity=0.011 Sum_probs=149.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCch-----hHHHHHHHHHh-cCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET-----ELNQRIQEWKS-KGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~-----~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
|++|||||+|.||+++++.|+++|++|+.++|... ..+.+...... ....+.+..+|+++.+++.+.++.
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~---- 77 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDV---- 77 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHH----
T ss_pred CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhh----
Confidence 89999999999999999999999999999998532 22222211111 234578889999999999988874
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-CCceEEEEcccccccc----------
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-GNGNIIFISSVAGVIA---------- 156 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~~~~---------- 156 (263)
.++|++||+|+...... +.++....+..|+.+...++.++.....+. ...++++.||......
T Consensus 78 --~~~D~Vih~Aa~~~~~~----~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~ 151 (339)
T d1n7ha_ 78 --IKPDEVYNLAAQSHVAV----SFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTP 151 (339)
T ss_dssp --HCCSEEEECCSCCCHHH----HHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSC
T ss_pred --hccchhhhccccccccc----cccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCCC
Confidence 37899999999754322 345667889999999999999886554443 2345666665543221
Q ss_pred CCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHh-cCC---------CCCC
Q 024752 157 IPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVL-RTP---------MLRP 226 (263)
Q Consensus 157 ~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~---------~~~~ 226 (263)
..+...|+.+|.+.+.+++.+++.+ |+.+..++|+.|..|..........+......... ..+ ...+
T Consensus 152 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~ 228 (339)
T d1n7ha_ 152 FHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDW 228 (339)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEEC
T ss_pred CCCcchhhHHHHHHHHHHHHHHHHh---CCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccc
Confidence 2245679999999999999988776 79999999999998864432222222211111111 111 1125
Q ss_pred CChhhHHHHHHHHcCCC
Q 024752 227 GEPNEVSSVVAFLCLSA 243 (263)
Q Consensus 227 ~~~~~va~~~~~l~s~~ 243 (263)
...+|+++++..++...
T Consensus 229 ~~v~D~a~~~~~~~~~~ 245 (339)
T d1n7ha_ 229 GFAGDYVEAMWLMLQQE 245 (339)
T ss_dssp EEHHHHHHHHHHHHTSS
T ss_pred eeeehHHHHHHHHHhcC
Confidence 66899999988766543
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.80 E-value=2.5e-18 Score=146.05 Aligned_cols=231 Identities=15% Similarity=0.099 Sum_probs=158.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCC------chhHHHHHHHHH-hcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN------ETELNQRIQEWK-SKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~------~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
|+||||||+|.||++++++|+++|++|+.+++. .....+....+. ....++.++.+|++|.+.+.++...
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~--- 79 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK--- 79 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH---
T ss_pred CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccc---
Confidence 789999999999999999999999999998642 111111122221 1245688999999999999888764
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc----------
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA---------- 156 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~---------- 156 (263)
..+++++|.|+...... +.++..+.+++|+.++.++++++ ++.+-.+++++||......
T Consensus 80 ---~~~~~i~h~Aa~~~~~~----~~~~p~~~~~~Nv~gt~~l~~~~----~~~~v~~~i~~ss~~~~~~~~~~~~~~~~ 148 (346)
T d1ek6a_ 80 ---YSFMAVIHFAGLKAVGE----SVQKPLDYYRVNLTGTIQLLEIM----KAHGVKNLVFSSSATVYGNPQYLPLDEAH 148 (346)
T ss_dssp ---CCEEEEEECCSCCCHHH----HHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGGCSCSSSSBCTTS
T ss_pred ---cccccccccccccCcHh----hHhCHHHHHHhhhcccccccchh----hhcCcccccccccceeeeccccccccccc
Confidence 57899999999764322 34556778999999999999887 5555668999988765432
Q ss_pred --CCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccc------ccchhHHHHHH-hHh-cC-----
Q 024752 157 --IPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVE------KDSNFLEHANR-MVL-RT----- 221 (263)
Q Consensus 157 --~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~------~~~~~~~~~~~-~~~-~~----- 221 (263)
.....+|+.+|.+.+...+.++.. ..++....++|+.+..+...... ....+...... ... ..
T Consensus 149 ~~~~~~~~Y~~~k~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~ 226 (346)
T d1ek6a_ 149 PTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVF 226 (346)
T ss_dssp CCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEE
T ss_pred cccccCChHHHHHHHHHHHHHHHHHh--ccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEc
Confidence 123456999999999998876543 34788999999988876432211 11111111111 110 11
Q ss_pred ----C------CCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCccc
Q 024752 222 ----P------MLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 222 ----~------~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
+ ...+..++|++.++..+.........++.+++.+|..+
T Consensus 227 g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~ 275 (346)
T d1ek6a_ 227 GNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGY 275 (346)
T ss_dssp CSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCE
T ss_pred CCcccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcc
Confidence 1 12356799999887766543344456889999988764
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.80 E-value=1.1e-18 Score=147.95 Aligned_cols=219 Identities=15% Similarity=0.113 Sum_probs=156.2
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
+||||||+|.||++++++|+++|+ +|+++++......... ...++.++.+|+++.+++.+.+. ..+|
T Consensus 2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~-----~~~~~~~i~~Di~~~~~~~~~~~-------~~~d 69 (342)
T d2blla1 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHV-------KKCD 69 (342)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHH-------HHCS
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc-----cCCCeEEEECccCChHHHHHHHH-------hCCC
Confidence 589999999999999999999995 8999988765433332 13568999999998877655432 2589
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC----------------
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI---------------- 157 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~---------------- 157 (263)
++||+|+...... ..++....+.+|+.|+.++++++ .+. +.+++++||...+...
T Consensus 70 ~Vih~a~~~~~~~----~~~~~~~~~~~nv~gt~~ll~~~----~~~-~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~ 140 (342)
T d2blla1 70 VVLPLVAIATPIE----YTRNPLRVFELDFEENLRIIRYC----VKY-RKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGP 140 (342)
T ss_dssp EEEECBCCCCHHH----HHHSHHHHHHHHTHHHHHHHHHH----HHT-TCEEEEECCGGGGBTCCCSSBCTTTCCCBCCC
T ss_pred ccccccccccccc----cccCCcccccccccccccccccc----ccc-cccccccccccccccccccccccccccccccc
Confidence 9999999765432 34555678999999999999997 333 3567777776654321
Q ss_pred --CCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcccccccc-----chhHHHHHHhHhcCC--------
Q 024752 158 --PMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKD-----SNFLEHANRMVLRTP-------- 222 (263)
Q Consensus 158 --~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~-------- 222 (263)
.+...|+.||.+.|.+++.+++.+ |+++..++|..+..+........ ........+.....+
T Consensus 141 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~ 217 (342)
T d2blla1 141 VNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGK 217 (342)
T ss_dssp TTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSC
T ss_pred cCCCcchhhhcccchhhhhhhhhccc---CceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCC
Confidence 123569999999999999998876 89999999999988754433211 112222222222211
Q ss_pred -CCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCC
Q 024752 223 -MLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGG 257 (263)
Q Consensus 223 -~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG 257 (263)
...+...+|+++++..++........|+.+++.+|
T Consensus 218 ~~r~~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~ 253 (342)
T d2blla1 218 QKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNP 253 (342)
T ss_dssp CEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCT
T ss_pred eeeeecccccccceeeeehhhccccCCCeEEEEecc
Confidence 22366799999999888765444456999999655
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.79 E-value=1.1e-18 Score=146.84 Aligned_cols=222 Identities=17% Similarity=0.128 Sum_probs=156.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEE------eeCCchhHH-HHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHT------CSRNETELN-QRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~------~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
++||||||+|.||+++++.|+++|+.|.. .++...... .....+ ....++.++..|+++........
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~----- 74 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPV-DADPRLRFVHGDIRDAGLLAREL----- 74 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGG-TTCTTEEEEECCTTCHHHHHHHT-----
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhh-hcCCCeEEEEeccccchhhhccc-----
Confidence 36899999999999999999999985543 332211100 001111 22456889999999988766542
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC---------
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI--------- 157 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~--------- 157 (263)
..+|.++|+|+...... ..+...+.+++|+.++.++++++ .+.+..++|+.||...+...
T Consensus 75 ---~~~d~vi~~a~~~~~~~----~~~~~~~~~~~N~~gt~~ll~~~----~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~ 143 (322)
T d1r6da_ 75 ---RGVDAIVHFAAESHVDR----SIAGASVFTETNVQGTQTLLQCA----VDAGVGRVVHVSTNQVYGSIDSGSWTESS 143 (322)
T ss_dssp ---TTCCEEEECCSCCCHHH----HHHCCHHHHHHHTHHHHHHHHHH----HHTTCCEEEEEEEGGGGCCCSSSCBCTTS
T ss_pred ---cccceEEeecccccccc----cccchHHHhhhhHHHHHHHHHHH----HHcCCceEEEeecceeecCCCCCCCCCCC
Confidence 47899999998754432 45666778899999999999998 45556799999998765432
Q ss_pred --CCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCC---------CCC
Q 024752 158 --PMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPM---------LRP 226 (263)
Q Consensus 158 --~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 226 (263)
.+...|+.+|.+.+.+++.+++++ |+.+..++|+.|..|...... .+.....+....-+. ..+
T Consensus 144 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~---~i~~~i~~~~~~~~i~v~~~g~~~r~~ 217 (322)
T d1r6da_ 144 PLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPEK---LIPLFVTNLLDGGTLPLYGDGANVREW 217 (322)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTS---HHHHHHHHHHTTCCEEEETTSCCEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEECcCCCcCc---HHHHHHHHHHcCCCcEEecCCCeEEcc
Confidence 234579999999999999998876 899999999999987543211 122222222222221 124
Q ss_pred CChhhHHHHHHHHcCCCCCCccCcEEEeCCCcccc
Q 024752 227 GEPNEVSSVVAFLCLSATSYVTGQVICVDGGYSVT 261 (263)
Q Consensus 227 ~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 261 (263)
...+|+++++..++.... .|+.+++.+|...+
T Consensus 218 i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~~~s 249 (322)
T d1r6da_ 218 VHTDDHCRGIALVLAGGR---AGEIYHIGGGLELT 249 (322)
T ss_dssp EEHHHHHHHHHHHHHHCC---TTCEEEECCCCEEE
T ss_pred EEHHHHHHHHHHHHhCCC---CCCeeEEeecccch
Confidence 568999999988876544 38899998886543
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.79 E-value=6.6e-19 Score=147.76 Aligned_cols=216 Identities=13% Similarity=0.082 Sum_probs=144.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
|+||||||+|.||++++++|+++|++|++++|......+..... ....++.....|+.+ ..+ .++|
T Consensus 2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~-~~~~~~d~~~~~~~~------------~~~-~~~d 67 (312)
T d2b69a1 2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW-IGHENFELINHDVVE------------PLY-IEVD 67 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGG-TTCTTEEEEECCTTS------------CCC-CCCS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHh-cCCCceEEEehHHHH------------HHH-cCCC
Confidence 78999999999999999999999999999987332211111111 112234444444432 122 4799
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc----------------C
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA----------------I 157 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~----------------~ 157 (263)
+|||+|+...... ..++..+.+++|+.++.++++++ ++.+ .++|++||.+.+.. .
T Consensus 68 ~VihlAa~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~~----~~~~-~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~ 138 (312)
T d2b69a1 68 QIYHLASPASPPN----YMYNPIKTLKTNTIGTLNMLGLA----KRVG-ARLLLASTSEVYGDPEVHPQSEDYWGHVNPI 138 (312)
T ss_dssp EEEECCSCCSHHH----HTTCHHHHHHHHHHHHHHHHHHH----HHHT-CEEEEEEEGGGGBSCSSSSBCTTCCCBCCSS
T ss_pred EEEECcccCCchh----HHhCHHHHHHHHHHHHHHHHHHH----HHcC-CcEEEEEChheecCCCCCCCCccccCCCCCC
Confidence 9999999764321 12345678899999999999987 3333 48999999765531 1
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCC---------CCCCCC
Q 024752 158 PMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTP---------MLRPGE 228 (263)
Q Consensus 158 ~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 228 (263)
.+...|+.+|.+.+.+++.++.++ |+++..++|+.|..|....... ..+.....+....-+ ...+..
T Consensus 139 ~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~-~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~ 214 (312)
T d2b69a1 139 GPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDG-RVVSNFILQALQGEPLTVYGSGSQTRAFQY 214 (312)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCC-CHHHHHHHHHHHTCCEEEESSSCCEEECEE
T ss_pred CCccHHHHHHHHHHHHHHHHHHHh---CCcEEEEEeeeEECCCCCCCCc-cHHHHHHHHHHcCCCeEEeCCCCeeEccEE
Confidence 234569999999999999998876 8999999999999876433211 111122222222211 123556
Q ss_pred hhhHHHHHHHHcCCCCCCccCcEEEeCCCccc
Q 024752 229 PNEVSSVVAFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 229 ~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
.+|+++++..++... .+..+++.+|..+
T Consensus 215 v~D~~~~~~~~~~~~----~~~~~n~~~~~~~ 242 (312)
T d2b69a1 215 VSDLVNGLVALMNSN----VSSPVNLGNPEEH 242 (312)
T ss_dssp HHHHHHHHHHHHTSS----CCSCEEESCCCEE
T ss_pred HHHHHHHHHHHHhhc----cCCceEecCCccc
Confidence 899999988776433 2567888888664
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.77 E-value=1.6e-18 Score=147.32 Aligned_cols=219 Identities=17% Similarity=0.096 Sum_probs=147.0
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc--hhH-HHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE--TEL-NQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~--~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
.|+||||||+|.||++++++|.+.|+.|.+++++. ... ...... ..+.++.++.+|++|.+.+..++
T Consensus 2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~--~~~~~i~~~~~Di~d~~~~~~~~-------- 71 (346)
T d1oc2a_ 2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEA--ILGDRVELVVGDIADAELVDKLA-------- 71 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGG--GCSSSEEEEECCTTCHHHHHHHH--------
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHH--hhcCCeEEEEccCCCHHHHHHHH--------
Confidence 58899999999999999999999998654444321 110 000000 12457899999999998888875
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc-------------
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA------------- 156 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~------------- 156 (263)
...|.++|.|+...... ..++..+.+++|+.|+.+++.++. +. +.++|++||...+..
T Consensus 72 ~~~~~v~~~a~~~~~~~----~~~~~~~~~~~N~~g~~nll~~~~----~~-~~k~i~~ss~~vyg~~~~~~~~~~~~~~ 142 (346)
T d1oc2a_ 72 AKADAIVHYAAESHNDN----SLNDPSPFIHTNFIGTYTLLEAAR----KY-DIRFHHVSTDEVYGDLPLREDLPGHGEG 142 (346)
T ss_dssp TTCSEEEECCSCCCHHH----HHHCCHHHHHHHTHHHHHHHHHHH----HH-TCEEEEEEEGGGGCCBCCGGGSTTTTCS
T ss_pred hhhhhhhhhhhcccccc----hhhCcccceeeehHhHHhhhhhhc----cc-cccccccccceEecccCccccccccccC
Confidence 35688999998764432 234456788999999999998873 32 357888887765421
Q ss_pred ----------CCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcC-----
Q 024752 157 ----------IPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRT----- 221 (263)
Q Consensus 157 ----------~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~----- 221 (263)
..+...|+.+|.+.|.+++.+..++ |+++..++|+.+..|..... ..+...........
T Consensus 143 ~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~vyGp~~~~~---~~~~~~i~~~~~~~~~~i~ 216 (346)
T d1oc2a_ 143 PGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIE---KFIPRQITNILAGIKPKLY 216 (346)
T ss_dssp TTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTT---SHHHHHHHHHHHTCCCEEE
T ss_pred cccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCEEEEeecceeCCCCCcc---chhHHHHHHHHcCCceeEe
Confidence 1123569999999999999988776 89999999999998643211 11111112222211
Q ss_pred ----CCCCCCChhhHHHHHHHHcCCCCCCccCcEEEeCCCcc
Q 024752 222 ----PMLRPGEPNEVSSVVAFLCLSATSYVTGQVICVDGGYS 259 (263)
Q Consensus 222 ----~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~ 259 (263)
....+...+|+++++..+...... |..+++.+|..
T Consensus 217 ~~g~~~r~~i~v~D~a~a~~~~~~~~~~---~~~~~~~~~~~ 255 (346)
T d1oc2a_ 217 GEGKNVRDWIHTNDHSTGVWAILTKGRM---GETYLIGADGE 255 (346)
T ss_dssp TTSCCEEECEEHHHHHHHHHHHHHHCCT---TCEEEECCSCE
T ss_pred CCCCccccccchhhHHHHHHHHHhhccc---Ccccccccccc
Confidence 122356689999998877654432 55556555543
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.76 E-value=6e-17 Score=139.31 Aligned_cols=174 Identities=18% Similarity=0.118 Sum_probs=132.7
Q ss_pred CCEEEEecCCCchHHHHHHHHHH-CCCeEEEeeC---------CchhHHHHHHHHHhc--------CCceEEEeccCCCH
Q 024752 13 GMTALVTGGTKGIGYAVVEELAA-FGAIVHTCSR---------NETELNQRIQEWKSK--------GLQVSGSVCDLKIR 74 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~-~g~~V~~~~r---------~~~~~~~~~~~~~~~--------~~~~~~~~~D~~~~ 74 (263)
+++||||||+|.||++++++|++ .|++|+++|+ ..+..+.....+... .....++.+|++|.
T Consensus 2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~ 81 (383)
T d1gy8a_ 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (383)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence 56899999999999999999986 6899999874 223333333333321 23577889999999
Q ss_pred HHHHHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccc
Q 024752 75 AQREKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGV 154 (263)
Q Consensus 75 ~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~ 154 (263)
+.++++++.. .++|+|+|.|+...... ..+.....+++|+.++.+++.++ ++.+..++++.+|....
T Consensus 82 ~~l~~~~~~~-----~~~d~ViH~Aa~~~~~~----~~~~~~~~~~~N~~~t~~~l~~~----~~~~~~~~~~~~s~~~~ 148 (383)
T d1gy8a_ 82 DFLNGVFTRH-----GPIDAVVHMCAFLAVGE----SVRDPLKYYDNNVVGILRLLQAM----LLHKCDKIIFSSSAAIF 148 (383)
T ss_dssp HHHHHHHHHS-----CCCCEEEECCCCCCHHH----HHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGT
T ss_pred HHhhhhhhcc-----ceeehhhcccccccccc----cccccccccccccccccccchhh----hccCCcccccccccccc
Confidence 9988888653 57899999999765432 34556778899999999999988 55556688888776654
Q ss_pred cc------------------CCCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccc
Q 024752 155 IA------------------IPMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLD 202 (263)
Q Consensus 155 ~~------------------~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~ 202 (263)
.. ..+...|+.+|.+.+.+++.+...+ |+.+..++|+.+..|...
T Consensus 149 ~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gl~~~~lR~~~vyG~~~~ 211 (383)
T d1gy8a_ 149 GNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAHED 211 (383)
T ss_dssp BSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCCTT
T ss_pred cccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh---CCCEEEEecceeeccCcc
Confidence 21 1134679999999999999988776 899999999999877654
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.75 E-value=1.9e-17 Score=138.54 Aligned_cols=153 Identities=13% Similarity=0.129 Sum_probs=121.8
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
.|+||||||+|.||++|+++|+++|+.|+++++.. .+|+++.+.+.+++.. .++
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~--------------------~~~~~~~~~~~~~~~~------~~~ 55 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------------ELNLLDSRAVHDFFAS------ERI 55 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------------TCCTTCHHHHHHHHHH------HCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch--------------------hccccCHHHHHHHHhh------cCC
Confidence 47899999999999999999999999988776543 2689999888887653 478
Q ss_pred cEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC---------------
Q 024752 93 NILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI--------------- 157 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~--------------- 157 (263)
|.++|+|+...... .......+.+++|+.++.+++.++ .+.+-.++|++||.+.+.+.
T Consensus 56 d~v~~~a~~~~~~~---~~~~~~~~~~~~Nv~gt~~ll~~a----~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~ 128 (315)
T d1e6ua_ 56 DQVYLAAAKVGGIV---ANNTYPADFIYQNMMIESNIIHAA----HQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTL 128 (315)
T ss_dssp SEEEECCCCCCCHH---HHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCC
T ss_pred CEEEEcchhccccc---cchhhHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEECCceEcCCCCCCCccCCccccCCC
Confidence 99999997653321 134555667889999999999988 44555699999998865321
Q ss_pred -CCCcchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCcc
Q 024752 158 -PMCSIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLL 201 (263)
Q Consensus 158 -~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~ 201 (263)
+....|+.+|.+.|.+++.+.++. |+++..++|+.|..|..
T Consensus 129 ~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyGp~~ 170 (315)
T d1e6ua_ 129 EPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHD 170 (315)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCC
Confidence 112469999999999999998876 89999999999998754
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.75 E-value=7.9e-17 Score=126.84 Aligned_cols=199 Identities=14% Similarity=0.077 Sum_probs=132.7
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
|..|+|+||||+|+||++++++|+++|++|.++.|+++++... ....+.++.+|++|.+++.+++ .
T Consensus 1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~------~~~~~~~~~gD~~d~~~l~~al--------~ 66 (205)
T d1hdoa_ 1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTV--------A 66 (205)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHH--------T
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc------cccccccccccccchhhHHHHh--------c
Confidence 4568899999999999999999999999999999998874322 1245788999999999988876 3
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCC----cchhhH
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMC----SIYASS 166 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~----~~Y~~s 166 (263)
..|++|+++|........ .++..+..+++++ +++++-.++|++||.......+.. ..|...
T Consensus 67 ~~d~vi~~~g~~~~~~~~-----------~~~~~~~~~l~~a----a~~~~v~r~i~~ss~~~~~~~~~~~~~~~~~~~~ 131 (205)
T d1hdoa_ 67 GQDAVIVLLGTRNDLSPT-----------TVMSEGARNIVAA----MKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDD 131 (205)
T ss_dssp TCSEEEECCCCTTCCSCC-----------CHHHHHHHHHHHH----HHHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHH
T ss_pred CCCEEEEEeccCCchhhh-----------hhhHHHHHHHHHH----HHhcCCCeEEEEeeeeccCCCccccccccccchH
Confidence 579999999875432211 2233444444444 466677899999987665443322 234555
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 167 KVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
|...+.+. ...|++.+.|+||.+........... .........+.+.+|+|+.++..+... .
T Consensus 132 ~~~~e~~l-------~~~~~~~tiirp~~~~~~~~~~~~~~---------~~~~~~~~~~i~~~DvA~~~~~~l~~~-~- 193 (205)
T d1hdoa_ 132 HIRMHKVL-------RESGLKYVAVMPPHIGDQPLTGAYTV---------TLDGRGPSRVISKHDLGHFMLRCLTTD-E- 193 (205)
T ss_dssp HHHHHHHH-------HHTCSEEEEECCSEEECCCCCSCCEE---------ESSSCSSCSEEEHHHHHHHHHHTTSCS-T-
T ss_pred HHHHHHHH-------HhcCCceEEEecceecCCCCcccEEE---------eeCCCCCCCcCCHHHHHHHHHHHhCCC-C-
Confidence 55544333 34689999999998854322111000 001112234567899999998877543 2
Q ss_pred ccCcEEEeCC
Q 024752 247 VTGQVICVDG 256 (263)
Q Consensus 247 ~~G~~i~~dg 256 (263)
..|+.+.+.+
T Consensus 194 ~~g~~~~~s~ 203 (205)
T d1hdoa_ 194 YDGHSTYPSH 203 (205)
T ss_dssp TTTCEEEEEC
T ss_pred CCCEEEecCC
Confidence 4488777643
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.73 E-value=4.7e-17 Score=138.26 Aligned_cols=176 Identities=15% Similarity=0.079 Sum_probs=133.9
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
++||+||||||+|.||+++++.|++.|++|++++|+........+... ....+.++.+|++|++.+.++.+. .
T Consensus 6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~i~~~~~Dl~d~~~l~~~~~~------~ 78 (356)
T d1rkxa_ 6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR-VADGMQSEIGDIRDQNKLLESIRE------F 78 (356)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT-TTTTSEEEECCTTCHHHHHHHHHH------H
T ss_pred hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhh-cccCCeEEEeeccChHhhhhhhhh------c
Confidence 689999999999999999999999999999999998765544433321 223588999999999999888775 3
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc------------CC
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA------------IP 158 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~------------~~ 158 (263)
.+|+++|.|+...... +.+.....+.+|+.++.++++++... .....+++.||...... ..
T Consensus 79 ~~~~v~~~aa~~~~~~----~~~~~~~~~~~Nv~g~~n~l~~~~~~---~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 151 (356)
T d1rkxa_ 79 QPEIVFHMAAQPLVRL----SYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWGYRENEAMG 151 (356)
T ss_dssp CCSEEEECCSCCCHHH----HHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSCBCTTSCBC
T ss_pred hhhhhhhhhccccccc----cccCCccccccccccchhhhhhhhcc---ccccccccccccccccccccccccccccccC
Confidence 7899999999754322 45667888999999999999998432 22334554444433321 12
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHc------cCCcEEEEEecCcccCCc
Q 024752 159 MCSIYASSKVAMNQLTKNLACEWA------KDKIRVNTVAPWVIRTPL 200 (263)
Q Consensus 159 ~~~~Y~~sK~a~~~~~~~~a~e~~------~~gi~v~~v~PG~v~t~~ 200 (263)
+...|+.+|...+.+.+.++.++. ..++.+..+.|+.+..|.
T Consensus 152 p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~ 199 (356)
T d1rkxa_ 152 GYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGG 199 (356)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTT
T ss_pred CCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCC
Confidence 346699999999999998888763 347899999999988765
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.70 E-value=2.4e-17 Score=132.41 Aligned_cols=198 Identities=13% Similarity=0.121 Sum_probs=134.9
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
+.|++|+||||||||.||++++++|.++|. +|++++|++...... ....+....+|+.+.+++.+.+
T Consensus 10 ~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~------~~~~i~~~~~D~~~~~~~~~~~----- 78 (232)
T d2bkaa1 10 FRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE------AYKNVNQEVVDFEKLDDYASAF----- 78 (232)
T ss_dssp HHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG------GGGGCEEEECCGGGGGGGGGGG-----
T ss_pred hCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc------ccceeeeeeecccccccccccc-----
Confidence 457889999999999999999999999995 799999976542211 1234666677887765544333
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhH
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASS 166 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s 166 (263)
...|++||++|... .........++|+.++..+++.+ .+.+-.++|++|+...... ....|..+
T Consensus 79 ---~~~d~vi~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~a----~~~~v~~fi~~Ss~~~~~~--~~~~Y~~~ 142 (232)
T d2bkaa1 79 ---QGHDVGFCCLGTTR-------GKAGAEGFVRVDRDYVLKSAELA----KAGGCKHFNLLSSKGADKS--SNFLYLQV 142 (232)
T ss_dssp ---SSCSEEEECCCCCH-------HHHHHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTCCTT--CSSHHHHH
T ss_pred ---cccccccccccccc-------cccchhhhhhhcccccceeeecc----cccCccccccCCccccccC--ccchhHHH
Confidence 46899999998531 23455667889999999998887 5566678999999876543 34569999
Q ss_pred HHHHHHHHHHHHHHHccCCc-EEEEEecCcccCCccccccccchhHHHHHHhHhcCC----CCCCCChhhHHHHHHHHcC
Q 024752 167 KVAMNQLTKNLACEWAKDKI-RVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTP----MLRPGEPNEVSSVVAFLCL 241 (263)
Q Consensus 167 K~a~~~~~~~~a~e~~~~gi-~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~va~~~~~l~s 241 (263)
|...|...+. .|. ++..++||.+..+...... ...+ ........+ .....+.+|+|++++..+.
T Consensus 143 K~~~E~~l~~-------~~~~~~~IlRP~~i~G~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~ 211 (232)
T d2bkaa1 143 KGEVEAKVEE-------LKFDRYSVFRPGVLLCDRQESRP-GEWL---VRKFFGSLPDSWASGHSVPVVTVVRAMLNNVV 211 (232)
T ss_dssp HHHHHHHHHT-------TCCSEEEEEECCEEECTTGGGSH-HHHH---HHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHT
T ss_pred HHHhhhcccc-------ccccceEEecCceeecCCCcCcH-HHHH---HHHHhhccCCcccCCCeEEHHHHHHHHHHHHh
Confidence 9988866543 244 4778899999877533211 1111 111111111 1223567999999876665
Q ss_pred CCC
Q 024752 242 SAT 244 (263)
Q Consensus 242 ~~~ 244 (263)
...
T Consensus 212 ~~~ 214 (232)
T d2bkaa1 212 RPR 214 (232)
T ss_dssp SCC
T ss_pred cCc
Confidence 443
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.67 E-value=1.2e-15 Score=121.93 Aligned_cols=215 Identities=13% Similarity=0.051 Sum_probs=138.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCe--EEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAI--VHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
++||||||+|+||+++++.|+++|+. |+...|++...+.. ...+..+.+|+++.+++.+++ ..
T Consensus 4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~--------~~ 68 (252)
T d2q46a1 4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-------GGEADVFIGDITDADSINPAF--------QG 68 (252)
T ss_dssp CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-------TCCTTEEECCTTSHHHHHHHH--------TT
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc-------cCCcEEEEeeecccccccccc--------cc
Confidence 79999999999999999999999974 66678887654322 345778899999999888776 46
Q ss_pred ccEEEeCCCCCCCCC---------CCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcc
Q 024752 92 LNILINNAGTFIPKE---------TTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSI 162 (263)
Q Consensus 92 id~li~~ag~~~~~~---------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~ 162 (263)
+|.+||+++...... ........+.....+|+.+..+++... .....+...+.++.....+......
T Consensus 69 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~s~~~~~~~~~~~~~ 144 (252)
T d2q46a1 69 IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAA----KVAGVKHIVVVGSMGGTNPDHPLNK 144 (252)
T ss_dssp CSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHH----HHHTCSEEEEEEETTTTCTTCGGGG
T ss_pred ceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccc----ccccccccccccccccCCCCccccc
Confidence 899999998764211 111122345566788999988887766 3344578888887665544333333
Q ss_pred hhhHHHHH-HHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcCCCCCCCChhhHHHHHHHHcC
Q 024752 163 YASSKVAM-NQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPMLRPGEPNEVSSVVAFLCL 241 (263)
Q Consensus 163 Y~~sK~a~-~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s 241 (263)
+..++... ......+ ....|+++..++||++..+............ ... ......+.+.+|+|++++.++.
T Consensus 145 ~~~~~~~~~~~~~~~~---~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~---~~~--~~~~~~~i~~~Dva~a~~~~l~ 216 (252)
T d2q46a1 145 LGNGNILVWKRKAEQY---LADSGTPYTIIRAGGLLDKEGGVRELLVGKD---DEL--LQTDTKTVPRADVAEVCIQALL 216 (252)
T ss_dssp GGGCCHHHHHHHHHHH---HHHSSSCEEEEEECEEECSCTTSSCEEEEST---TGG--GGSSCCEEEHHHHHHHHHHHTT
T ss_pred ccccchhhhhhhhhhh---hhcccccceeecceEEECCCcchhhhhhccC---ccc--ccCCCCeEEHHHHHHHHHHHhC
Confidence 32222222 2222222 2235899999999999877543221110000 000 0112335678999999887765
Q ss_pred CCCCCccCcEEEeCCC
Q 024752 242 SATSYVTGQVICVDGG 257 (263)
Q Consensus 242 ~~~~~~~G~~i~~dgG 257 (263)
.. ...|+.+++.++
T Consensus 217 ~~--~~~g~~~~i~~~ 230 (252)
T d2q46a1 217 FE--EAKNKAFDLGSK 230 (252)
T ss_dssp CG--GGTTEEEEEEEC
T ss_pred Cc--cccCcEEEEeeC
Confidence 33 246899998764
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.53 E-value=5.4e-14 Score=114.98 Aligned_cols=194 Identities=18% Similarity=0.147 Sum_probs=131.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
++||||||+|.||++++++|.++|++|+.++|+. +|++|.++++++++.. ++|
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~---------------------~D~~d~~~~~~~l~~~------~~d 54 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------------LDITNVLAVNKFFNEK------KPN 54 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------------CCTTCHHHHHHHHHHH------CCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh---------------------ccCCCHHHHHHHHHHc------CCC
Confidence 4699999999999999999999999999999853 5899999998887643 689
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc-----------CCCCcc
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA-----------IPMCSI 162 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~~~~~~ 162 (263)
++||+|+...... .....+..+..|+.....+.... ... ...+++.||...... ..+...
T Consensus 55 ~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~~~~----~~~-~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~ 125 (281)
T d1vl0a_ 55 VVINCAAHTAVDK----CEEQYDLAYKINAIGPKNLAAAA----YSV-GAEIVQISTDYVFDGEAKEPITEFDEVNPQSA 125 (281)
T ss_dssp EEEECCCCCCHHH----HHHCHHHHHHHHTHHHHHHHHHH----HHH-TCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSH
T ss_pred EEEeecccccccc----ccccchhhccccccccccccccc----ccc-cccccccccceeeeccccccccccccccchhh
Confidence 9999999754322 33445667778887777776665 222 346666666543221 224456
Q ss_pred hhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHHHHhHhcC-------CCCCCCChhhHHHH
Q 024752 163 YASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRT-------PMLRPGEPNEVSSV 235 (263)
Q Consensus 163 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~va~~ 235 (263)
|+.+|...+.+.+.. +.+...+.|+++..+..+... .+. ....... ....+...+|++++
T Consensus 126 ~~~~k~~~e~~~~~~-------~~~~~i~R~~~vyG~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~i~v~D~~~~ 192 (281)
T d1vl0a_ 126 YGKTKLEGENFVKAL-------NPKYYIVRTAWLYGDGNNFVK---TMI---NLGKTHDELKVVHDQVGTPTSTVDLARV 192 (281)
T ss_dssp HHHHHHHHHHHHHHH-------CSSEEEEEECSEESSSSCHHH---HHH---HHHHHCSEEEEESSCEECCEEHHHHHHH
T ss_pred hhhhhhHHHHHHHHh-------CCCccccceeEEeCCCccccc---chh---hhhccCCceeecCCceeccchhhhhhhh
Confidence 899998888776532 678888999999876432211 111 1111111 11245679999999
Q ss_pred HHHHcCCCCCCccCcEEEeCCCccc
Q 024752 236 VAFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 236 ~~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
+..++.... +| .+++.++..+
T Consensus 193 ~~~~~~~~~---~g-~~~~~~~~~~ 213 (281)
T d1vl0a_ 193 VLKVIDEKN---YG-TFHCTCKGIC 213 (281)
T ss_dssp HHHHHHHTC---CE-EEECCCBSCE
T ss_pred hhhhhhhcc---cC-ceeEeCCCcc
Confidence 988875433 24 6676666544
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.49 E-value=3.3e-14 Score=111.99 Aligned_cols=188 Identities=14% Similarity=0.118 Sum_probs=121.6
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
.|++|||||||.||++++++|.++|+ +|+...|++.. ...++ ..+..+..++ .+....
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~----------~~~~~---~~~~~d~~~~-------~~~~~~ 61 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------EHPRL---DNPVGPLAEL-------LPQLDG 61 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------CCTTE---ECCBSCHHHH-------GGGCCS
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh----------hcccc---cccccchhhh-------hhcccc
Confidence 48999999999999999999999997 67777776532 11122 3344443332 222225
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHHH
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVAM 170 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~ 170 (263)
.+|.+|+++|..... ....+...++|+.++.++++++ ++.+..+++++||..+... ....|..+|...
T Consensus 62 ~~d~vi~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~a----~~~~v~~~i~~Ss~~~~~~--~~~~y~~~K~~~ 129 (212)
T d2a35a1 62 SIDTAFCCLGTTIKE------AGSEEAFRAVDFDLPLAVGKRA----LEMGARHYLVVSALGADAK--SSIFYNRVKGEL 129 (212)
T ss_dssp CCSEEEECCCCCHHH------HSSHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTCCTT--CSSHHHHHHHHH
T ss_pred chheeeeeeeeeccc------cccccccccchhhhhhhccccc----ccccccccccccccccccc--cccchhHHHHHH
Confidence 789999999864221 1223567888999999999887 5666689999999766533 356799999988
Q ss_pred HHHHHHHHHHHccCCc-EEEEEecCcccCCccccccccchhHHHHHHhHhcCCCC--CCCChhhHHHHHHHHcCCCC
Q 024752 171 NQLTKNLACEWAKDKI-RVNTVAPWVIRTPLLDTVEKDSNFLEHANRMVLRTPML--RPGEPNEVSSVVAFLCLSAT 244 (263)
Q Consensus 171 ~~~~~~~a~e~~~~gi-~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~va~~~~~l~s~~~ 244 (263)
|...+ ..+. +.+.++|+.|..+....... .... ........+ ++...+|+|++++.++....
T Consensus 130 E~~l~-------~~~~~~~~I~Rp~~v~G~~~~~~~~-~~~~----~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~~ 194 (212)
T d2a35a1 130 EQALQ-------EQGWPQLTIARPSLLFGPREEFRLA-EILA----APIARILPGKYHGIEACDLARALWRLALEEG 194 (212)
T ss_dssp HHHHT-------TSCCSEEEEEECCSEESTTSCEEGG-GGTT----CCCC----CHHHHHHHHHHHHHHHHHHTCCC
T ss_pred hhhcc-------ccccccceeeCCcceeCCcccccHH-HHHH----HHHhhccCCCCcEEEHHHHHHHHHHHHcCCC
Confidence 76554 2244 57889999998764322110 0000 000000001 12457999999998886554
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.45 E-value=9.4e-13 Score=108.74 Aligned_cols=216 Identities=13% Similarity=-0.013 Sum_probs=122.6
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHH-HHHHHH-hcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQ-RIQEWK-SKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~-~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
.++||||||+|.||++++++|+++|++|+++.|+...... ..+.+. .....+.++.+|+++.+++.+.+ .
T Consensus 3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~--------~ 74 (312)
T d1qyda_ 3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDAL--------K 74 (312)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHH--------T
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhc--------c
Confidence 3559999999999999999999999999999997643211 111111 12345788999999998887766 3
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCC-CCcchhhHHHH
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIP-MCSIYASSKVA 169 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-~~~~Y~~sK~a 169 (263)
..+.++++++..... .|..+...++.++ .+....++++.||.......+ ....|..++..
T Consensus 75 ~~~~~~~~~~~~~~~---------------~~~~~~~~~l~~a----~~~~~~~~v~~Ss~g~~~~~~~~~~~~~~~~~~ 135 (312)
T d1qyda_ 75 QVDVVISALAGGVLS---------------HHILEQLKLVEAI----KEAGNIKRFLPSEFGMDPDIMEHALQPGSITFI 135 (312)
T ss_dssp TCSEEEECCCCSSSS---------------TTTTTHHHHHHHH----HHSCCCSEEECSCCSSCTTSCCCCCSSTTHHHH
T ss_pred Ccchhhhhhhhcccc---------------cchhhhhHHHHHH----HHhcCCcEEEEeeccccCCCcccccchhhhhhH
Confidence 568888887753221 2344444555554 445566777777754433221 11223333333
Q ss_pred HHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccc---h-hHHHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCC
Q 024752 170 MNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDS---N-FLEHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATS 245 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~ 245 (263)
....++.+.. ..|+....++|+.+..+......... . .......+........+.+.+|++++++.++... .
T Consensus 136 ~~~~~~~~~~---~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~-~ 211 (312)
T d1qyda_ 136 DKRKVRRAIE---AASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDP-Q 211 (312)
T ss_dssp HHHHHHHHHH---HTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCG-G
T ss_pred HHHHHHHhhc---ccccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCc-c
Confidence 3333333322 34788888999988654322211000 0 0000000000111223567899999988777542 2
Q ss_pred CccCcEEEeCCCcc
Q 024752 246 YVTGQVICVDGGYS 259 (263)
Q Consensus 246 ~~~G~~i~~dgG~~ 259 (263)
..++..+++.++..
T Consensus 212 ~~~~~~~~~~~~~~ 225 (312)
T d1qyda_ 212 TLNKTMYIRPPMNI 225 (312)
T ss_dssp GSSSEEECCCGGGE
T ss_pred ccCceEEEeCCCcC
Confidence 23344455655543
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.37 E-value=1.3e-12 Score=107.18 Aligned_cols=130 Identities=15% Similarity=0.195 Sum_probs=95.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
++||||||+|.||+++++.|.+.|..|.+..|... +..|++|.+.++++++.. ++|
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~g~~v~~~~~~~~------------------~~~Dl~~~~~~~~~i~~~------~~D 56 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKE------------------FCGDFSNPKGVAETVRKL------RPD 56 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTTSEEEEECTTCSS------------------SCCCTTCHHHHHHHHHHH------CCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEECCCcc------------------ccCcCCCHHHHHHHHHHc------CCC
Confidence 35999999999999999999999975554433321 247999999998888653 689
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc-----------CCCCcc
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA-----------IPMCSI 162 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~~~~~~ 162 (263)
+|||+||...... +.+.-...+.+|+.+...++.++ ++ .+.+++++||...... ..+...
T Consensus 57 ~Vih~Aa~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~-~~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~ 127 (298)
T d1n2sa_ 57 VIVNAAAHTAVDK----AESEPELAQLLNATSVEAIAKAA----NE-TGAWVVHYSTDYVFPGTGDIPWQETDATSPLNV 127 (298)
T ss_dssp EEEECCCCCCHHH----HTTCHHHHHHHHTHHHHHHHHHH----TT-TTCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSH
T ss_pred EEEEecccccccc----cccCccccccccccccccchhhh----hc-cccccccccccccccCCCCCCCccccccCCCch
Confidence 9999999764432 22334677899999999999987 33 3467888888765432 113457
Q ss_pred hhhHHHHHHHHHHH
Q 024752 163 YASSKVAMNQLTKN 176 (263)
Q Consensus 163 Y~~sK~a~~~~~~~ 176 (263)
|+.+|.+.+.+.+.
T Consensus 128 y~~~k~~~e~~~~~ 141 (298)
T d1n2sa_ 128 YGKTKLAGEKALQD 141 (298)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HhhhhhhhhhhHHh
Confidence 99999988876643
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.36 E-value=3.1e-12 Score=104.87 Aligned_cols=213 Identities=12% Similarity=0.059 Sum_probs=124.2
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHH--HHHHHh-cCCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR--IQEWKS-KGLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~--~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
.|+||||||+|.||+++++.|+++|++|++++|+....... ...+.. ....+.++.+|+.+.....+.++
T Consensus 3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------- 75 (307)
T d1qyca_ 3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK------- 75 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-------
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhh-------
Confidence 47899999999999999999999999999999976543211 111211 13457788999999988777664
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHHH
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKVA 169 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a 169 (263)
..+.++++++... ..+...+.+++ ......++++.||............+...+..
T Consensus 76 -~~~~vi~~~~~~~-------------------~~~~~~~~~a~----~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 131 (307)
T d1qyca_ 76 -NVDVVISTVGSLQ-------------------IESQVNIIKAI----KEVGTVKRFFPSEFGNDVDNVHAVEPAKSVFE 131 (307)
T ss_dssp -TCSEEEECCCGGG-------------------SGGGHHHHHHH----HHHCCCSEEECSCCSSCTTSCCCCTTHHHHHH
T ss_pred -hceeeeecccccc-------------------cchhhHHHHHH----HHhccccceeeecccccccccccccccccccc
Confidence 4688888887432 22223333443 34445677777775554443334444444444
Q ss_pred HHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccch-hH--HHHHHhHhcCCCCCCCChhhHHHHHHHHcCCCCCC
Q 024752 170 MNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSN-FL--EHANRMVLRTPMLRPGEPNEVSSVVAFLCLSATSY 246 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 246 (263)
.......+..+ .|+....++|+.+..+.......... .. ..............+...+|++++++.++... ..
T Consensus 132 ~~~~~~~~~~~---~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~-~~ 207 (307)
T d1qyca_ 132 VKAKVRRAIEA---EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDP-RT 207 (307)
T ss_dssp HHHHHHHHHHH---HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCG-GG
T ss_pred ccccccchhhc---cCCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcCh-hh
Confidence 43333333333 37888899999887554322111000 00 00000111112233567999999998777533 22
Q ss_pred ccCcEEEeCCCccc
Q 024752 247 VTGQVICVDGGYSV 260 (263)
Q Consensus 247 ~~G~~i~~dgG~~~ 260 (263)
.++...++.++..+
T Consensus 208 ~~~~~~~~~~~~~~ 221 (307)
T d1qyca_ 208 LNKTLYLRLPANTL 221 (307)
T ss_dssp TTEEEECCCGGGEE
T ss_pred cCceeEEeCCCCcc
Confidence 23334445555543
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.36 E-value=5.5e-12 Score=106.40 Aligned_cols=207 Identities=14% Similarity=0.038 Sum_probs=125.3
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
+.|+|+||||+|.||++++++|+++|++|+++.|+..+... ..+. ....+..+.+|++++.++.+.+ + ..
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~-~~~~v~~~~gD~~d~~~~~~~a------~-~~ 71 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQ-AIPNVTLFQGPLLNNVPLMDTL------F-EG 71 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHH-TSTTEEEEESCCTTCHHHHHHH------H-TT
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhc-ccCCCEEEEeeCCCcHHHHHHH------h-cC
Confidence 57999999999999999999999999999999998776432 2222 2245888999999865543222 1 45
Q ss_pred ccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccC--CCCcchhhHHHH
Q 024752 92 LNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAI--PMCSIYASSKVA 169 (263)
Q Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~--~~~~~Y~~sK~a 169 (263)
.|.++.+...... .|+....+++.++ .+.+..++++.||....... .....|..+|..
T Consensus 72 ~~~~~~~~~~~~~----------------~~~~~~~~~~~aa----~~agv~~~v~~Ss~~~~~~~~~~~~~~~~~~k~~ 131 (350)
T d1xgka_ 72 AHLAFINTTSQAG----------------DEIAIGKDLADAA----KRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFT 131 (350)
T ss_dssp CSEEEECCCSTTS----------------CHHHHHHHHHHHH----HHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHH
T ss_pred CceEEeecccccc----------------hhhhhhhHHHHHH----HHhCCCceEEEeeccccccCCcccchhhhhhHHH
Confidence 6777766542211 1222333444444 45555688888886654332 234557778877
Q ss_pred HHHHHHHHHHHHccCCcEEEEEecCcccCCcccccccc---chhHHHHHHhHhcCCCC-----CCCC-hhhHHHHHHHHc
Q 024752 170 MNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKD---SNFLEHANRMVLRTPML-----RPGE-PNEVSSVVAFLC 240 (263)
Q Consensus 170 ~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~-----~~~~-~~~va~~~~~l~ 240 (263)
.+.+.+ ..++....+.|+.+..+........ ..... .......|.. .+.+ .+|+++++..++
T Consensus 132 ~~~~~~-------~~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l 202 (350)
T d1xgka_ 132 VENYVR-------QLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPD--GTFEWHAPFDPDIPLPWLDAEHDVGPALLQIF 202 (350)
T ss_dssp HHHHHH-------TSSSCEEEEEECEEGGGCBSSSCSSCBEEECTT--SCEEEEESSCTTSCEEEECHHHHHHHHHHHHH
T ss_pred HHHHHH-------hhccCceeeeeceeecccccccccccccccccc--ccceeeecccCCCcceEEEeHHHHHHHHHHHH
Confidence 665544 2367888899998765432211110 00000 0000011111 0122 478999988777
Q ss_pred CCCCCCccCcEEEeCCC
Q 024752 241 LSATSYVTGQVICVDGG 257 (263)
Q Consensus 241 s~~~~~~~G~~i~~dgG 257 (263)
.+......|+.+++.|.
T Consensus 203 ~~~~~~~~G~~~~~~g~ 219 (350)
T d1xgka_ 203 KDGPQKWNGHRIALTFE 219 (350)
T ss_dssp HHCHHHHTTCEEEECSE
T ss_pred hCChhhcCCeEEEEeCC
Confidence 65544567999988764
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.32 E-value=1.6e-11 Score=100.92 Aligned_cols=216 Identities=13% Similarity=0.106 Sum_probs=130.2
Q ss_pred EEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh-cCCCcc
Q 024752 16 ALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ-FDGKLN 93 (263)
Q Consensus 16 vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~~id 93 (263)
||||||+|.||+++++.|+++|. .|+++++-..... ... +... ..+|..+.+.. .+..... ....++
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~-~~~-~~~~------~~~~~~~~~~~---~~~~~~~~~~~~~~ 70 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FVN-LVDL------NIADYMDKEDF---LIQIMAGEEFGDVE 70 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG-GHH-HHTS------CCSEEEEHHHH---HHHHHTTCCCSSCC
T ss_pred EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcch-hhc-cccc------chhhhccchHH---HHHHhhhhcccchh
Confidence 89999999999999999999996 6888764332211 111 1111 12333333332 2222221 125689
Q ss_pred EEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc-----------CCCCcc
Q 024752 94 ILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA-----------IPMCSI 162 (263)
Q Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~~~~~~ 162 (263)
+++|.|+...... .........|+.+...++.++ ++++ -++++.||.....+ .++...
T Consensus 71 ~i~~~aa~~~~~~------~~~~~~~~~~~~~~~~~l~~~----~~~~-i~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~ 139 (307)
T d1eq2a_ 71 AIFHEGACSSTTE------WDGKYMMDNNYQYSKELLHYC----LERE-IPFLYASSAATYGGRTSDFIESREYEKPLNV 139 (307)
T ss_dssp EEEECCSCCCTTC------CCHHHHHHHTHHHHHHHHHHH----HHHT-CCEEEEEEGGGGTTCCSCBCSSGGGCCCSSH
T ss_pred hhhhhcccccccc------ccccccccccccccccccccc----cccc-ccccccccccccccccccccccccccccccc
Confidence 9999998654322 123556788888888888776 3332 34666666555432 234567
Q ss_pred hhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCccccccccchhHHHH-HHhHh----------cCCCCCCCChhh
Q 024752 163 YASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPLLDTVEKDSNFLEHA-NRMVL----------RTPMLRPGEPNE 231 (263)
Q Consensus 163 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~-~~~~~----------~~~~~~~~~~~~ 231 (263)
|+.+|.+.+.+++.+..+ .++.+..++|..+..|............... ..... ......+...+|
T Consensus 140 Y~~~K~~~e~~~~~~~~~---~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d 216 (307)
T d1eq2a_ 140 YGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGD 216 (307)
T ss_dssp HHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHH
T ss_pred cccccchhhhhccccccc---cccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeeccc
Confidence 999999999999887554 4789999999999887654332222211111 11111 111234556889
Q ss_pred HHHHHHHHcCCCCCCccCcEEEeCCCccc
Q 024752 232 VSSVVAFLCLSATSYVTGQVICVDGGYSV 260 (263)
Q Consensus 232 va~~~~~l~s~~~~~~~G~~i~~dgG~~~ 260 (263)
+++++..+..... ...+++.+|...
T Consensus 217 ~~~~~~~~~~~~~----~~~~~~~~~~~~ 241 (307)
T d1eq2a_ 217 VADVNLWFLENGV----SGIFNLGTGRAE 241 (307)
T ss_dssp HHHHHHHHHHHCC----CEEEEESCSCCB
T ss_pred HHHHHHHHhhhcc----ccccccccccch
Confidence 9999887665332 457788777654
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.16 E-value=1.7e-15 Score=117.86 Aligned_cols=170 Identities=10% Similarity=0.073 Sum_probs=92.4
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEecc--------------CCCHHHHHHH
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCD--------------LKIRAQREKL 80 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D--------------~~~~~~~~~~ 80 (263)
++.|+||+|++|+++|+.|++.|++|++.+|++++++++.+++............| ..........
T Consensus 2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (212)
T d1jaya_ 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIPWEHAIDTA 81 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSCHHHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEeeccccccchhhhhhhheeeeccchHH
Confidence 46788888999999999999999999999999999999988887542222222222 1111111111
Q ss_pred HHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCC
Q 024752 81 METVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMC 160 (263)
Q Consensus 81 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~ 160 (263)
....... ............... ....+..+...+.+...+.+........+++.|.....+.+..
T Consensus 82 -~~~~~~~-~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (212)
T d1jaya_ 82 -RDLKNIL-REKIVVSPLVPVSRG-------------AKGFTYSSERSAAEIVAEVLESEKVVSALHTIPAARFANLDEK 146 (212)
T ss_dssp -HHTHHHH-TTSEEEECCCCEECC-------------TTCCEECCSSCHHHHHHHHHTCSCEEECCTTCCHHHHHCTTCC
T ss_pred -HHhhhhh-ccccccccccccccc-------------cccccccccchhhhhhhhhhhhhcccccceeecHHHhcCcccc
Confidence 1111110 111111111111000 0111111111122223333334333333333444433344455
Q ss_pred cchhhHHHHHHHHHHHHHHHHccCCcEEEEEecCcccCC
Q 024752 161 SIYASSKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTP 199 (263)
Q Consensus 161 ~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~ 199 (263)
..|...+++....++..+.++....+.++.+.||.+++.
T Consensus 147 ~~~~~~~a~~~~~a~~~~~~~~~~~~g~~~~~~G~l~~a 185 (212)
T d1jaya_ 147 FDWDVPVCGDDDESKKVVMSLISEIDGLRPLDAGPLSNS 185 (212)
T ss_dssp CCEEEEEEESCHHHHHHHHHHHHHSTTEEEEEEESGGGH
T ss_pred cCccceEEeCCHHHHHHHHHHHhhCCCeEEEEeChHHHH
Confidence 567777777777777777777666788889999988754
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=98.31 E-value=6e-06 Score=61.35 Aligned_cols=83 Identities=27% Similarity=0.365 Sum_probs=58.6
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
.|.+|+|+| +|++|...++.+...|++|+++++++++++...+ .+...... .|- ..++.....+++.+..+..
T Consensus 26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~----~ga~~~~~-~~~-~~~~~~~~~~~~~~~~g~g 98 (170)
T d1e3ja2 26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN----CGADVTLV-VDP-AKEEESSIIERIRSAIGDL 98 (170)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----TTCSEEEE-CCT-TTSCHHHHHHHHHHHSSSC
T ss_pred CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH----cCCcEEEe-ccc-cccccchhhhhhhcccccC
Confidence 478999997 6899999999999999999999999988654432 23333222 222 2223445555666666567
Q ss_pred ccEEEeCCCC
Q 024752 92 LNILINNAGT 101 (263)
Q Consensus 92 id~li~~ag~ 101 (263)
+|++|.++|.
T Consensus 99 ~D~vid~~g~ 108 (170)
T d1e3ja2 99 PNVTIDCSGN 108 (170)
T ss_dssp CSEEEECSCC
T ss_pred CceeeecCCC
Confidence 9999999984
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=98.28 E-value=2.6e-06 Score=64.67 Aligned_cols=87 Identities=16% Similarity=0.167 Sum_probs=60.2
Q ss_pred CCE-EEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 13 GMT-ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 13 ~k~-vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
|+. ++++||+|++|...++.....|++|+.+.|+.+..++..+.+++.+...... .|-.+..+....+.++.+..++.
T Consensus 29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~-~~~~~~~~~~~~v~~~~~~~g~~ 107 (189)
T d1gu7a2 29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVIT-EDQNNSREFGPTIKEWIKQSGGE 107 (189)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEE-HHHHHCGGGHHHHHHHHHHHTCC
T ss_pred CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEEe-ccccchhHHHHHHHHHHhhccCC
Confidence 554 4557999999999999888899999999999888888777777766653332 22111122333344444433467
Q ss_pred ccEEEeCCC
Q 024752 92 LNILINNAG 100 (263)
Q Consensus 92 id~li~~ag 100 (263)
+|+++.+.|
T Consensus 108 vdvv~D~vg 116 (189)
T d1gu7a2 108 AKLALNCVG 116 (189)
T ss_dssp EEEEEESSC
T ss_pred ceEEEECCC
Confidence 999999877
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=98.22 E-value=7e-06 Score=61.84 Aligned_cols=89 Identities=18% Similarity=0.224 Sum_probs=67.8
Q ss_pred ccccCCCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHH---HHhcCCceEEEeccCCCHHHHHHH
Q 024752 5 REQRWSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQE---WKSKGLQVSGSVCDLKIRAQREKL 80 (263)
Q Consensus 5 ~~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~~~D~~~~~~~~~~ 80 (263)
+....++++|+|+|.|+ ||.|++++..|++.|. +++++.|+.+..++.... +.... .......|+.+.+++...
T Consensus 10 ~~~~~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~ 87 (182)
T d1vi2a1 10 KESGFDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENT-DCVVTVTDLADQQAFAEA 87 (182)
T ss_dssp HHTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS-SCEEEEEETTCHHHHHHH
T ss_pred HHcCCCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhc-CcceEeeecccccchhhh
Confidence 34567899999999999 6889999999999998 699999998877665443 33322 234557889888777665
Q ss_pred HHHHHhhcCCCccEEEeCCCCCC
Q 024752 81 METVSSQFDGKLNILINNAGTFI 103 (263)
Q Consensus 81 ~~~~~~~~~~~id~li~~ag~~~ 103 (263)
. ...|++||+.....
T Consensus 88 ~--------~~~diiIN~Tp~G~ 102 (182)
T d1vi2a1 88 L--------ASADILTNGTKVGM 102 (182)
T ss_dssp H--------HTCSEEEECSSTTS
T ss_pred h--------cccceeccccCCcc
Confidence 4 36799999987653
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=98.21 E-value=4.8e-06 Score=62.73 Aligned_cols=105 Identities=15% Similarity=0.175 Sum_probs=70.4
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
+|++|+|+||+|++|...++.....|++|+.+++++++.+... +.+....+.. ++++..+.+.+.. .+..
T Consensus 29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~----~~Ga~~vi~~---~~~~~~~~~~~~~---~~~G 98 (182)
T d1v3va2 29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK----QIGFDAAFNY---KTVNSLEEALKKA---SPDG 98 (182)
T ss_dssp SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTTCSEEEET---TSCSCHHHHHHHH---CTTC
T ss_pred CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHH----hhhhhhhccc---ccccHHHHHHHHh---hcCC
Confidence 4899999999999999999999999999999999887654433 3344433322 3332233332222 1246
Q ss_pred ccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccc
Q 024752 92 LNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGV 154 (263)
Q Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~ 154 (263)
+|+++.+.|. ..++..++.++. +|+++.++.....
T Consensus 99 vd~v~D~vG~--------------------------~~~~~~~~~l~~--~G~~v~~G~~~~~ 133 (182)
T d1v3va2 99 YDCYFDNVGG--------------------------EFLNTVLSQMKD--FGKIAICGAISVY 133 (182)
T ss_dssp EEEEEESSCH--------------------------HHHHHHGGGEEE--EEEEEECCCGGGT
T ss_pred CceeEEecCc--------------------------hhhhhhhhhccC--CCeEEeecceeec
Confidence 9999999983 112444555544 6899998865543
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.19 E-value=1.9e-06 Score=64.61 Aligned_cols=106 Identities=17% Similarity=0.124 Sum_probs=69.2
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
.+|++|||+||+||+|...++.....|++|+.+++++++.+... +.+..... |-++ . ..+. +....++
T Consensus 30 ~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~----~lGa~~vi---~~~~-~-~~~~---~~~~~~~ 97 (176)
T d1xa0a2 30 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR----VLGAKEVL---ARED-V-MAER---IRPLDKQ 97 (176)
T ss_dssp GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH----HTTCSEEE---ECC--------------CCSC
T ss_pred CCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHH----hcccceee---ecch-h-HHHH---HHHhhcc
Confidence 45899999999999999999999899999999999988865443 23443322 2121 1 1111 1222235
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccccc
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIA 156 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~ 156 (263)
++|+++.+.|.. .. ...+..|+. +||++.++...+...
T Consensus 98 gvD~vid~vgg~--------~~------------------~~~l~~l~~--~Griv~~G~~~g~~~ 135 (176)
T d1xa0a2 98 RWAAAVDPVGGR--------TL------------------ATVLSRMRY--GGAVAVSGLTGGAEV 135 (176)
T ss_dssp CEEEEEECSTTT--------TH------------------HHHHHTEEE--EEEEEECSCCSSSCC
T ss_pred CcCEEEEcCCch--------hH------------------HHHHHHhCC--CceEEEeecccCccc
Confidence 799999999842 11 223334444 699999998765544
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.16 E-value=6.1e-06 Score=62.01 Aligned_cols=78 Identities=17% Similarity=0.259 Sum_probs=55.1
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc-CC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF-DG 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~ 90 (263)
+|++|||+||+|++|...++.+...|++|+++++++++.+. +++.+.... .|-++++ +.+++++.. +.
T Consensus 25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~----l~~~Ga~~v---i~~~~~~----~~~~v~~~t~~~ 93 (183)
T d1pqwa_ 25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREM----LSRLGVEYV---GDSRSVD----FADEILELTDGY 93 (183)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHH----HHTTCCSEE---EETTCST----HHHHHHHHTTTC
T ss_pred CCCEEEEECCCCCcccccchhhccccccceeeecccccccc----ccccccccc---ccCCccC----HHHHHHHHhCCC
Confidence 37999999999999999999998999999999998766543 234444422 2434432 223334433 24
Q ss_pred CccEEEeCCC
Q 024752 91 KLNILINNAG 100 (263)
Q Consensus 91 ~id~li~~ag 100 (263)
.+|+++.+.|
T Consensus 94 g~d~v~d~~g 103 (183)
T d1pqwa_ 94 GVDVVLNSLA 103 (183)
T ss_dssp CEEEEEECCC
T ss_pred CEEEEEeccc
Confidence 6999999998
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.03 E-value=1.3e-05 Score=59.78 Aligned_cols=78 Identities=17% Similarity=0.260 Sum_probs=55.0
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc-CC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF-DG 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~ 90 (263)
+|++|+|+||+|++|...++.....|++|+++++++++.+.. + +.+..-. .|.++++-.+ ++++.. +.
T Consensus 28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~-~---~~Ga~~v---i~~~~~~~~~----~i~~~t~~~ 96 (174)
T d1yb5a2 28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-L---QNGAHEV---FNHREVNYID----KIKKYVGEK 96 (174)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-H---HTTCSEE---EETTSTTHHH----HHHHHHCTT
T ss_pred CCCEEEEEeccccccccccccccccCcccccccccccccccc-c---ccCcccc---cccccccHHH----HhhhhhccC
Confidence 589999999999999999999999999999999987665433 2 3344322 2555543333 333332 24
Q ss_pred CccEEEeCCC
Q 024752 91 KLNILINNAG 100 (263)
Q Consensus 91 ~id~li~~ag 100 (263)
.+|+++.+.|
T Consensus 97 g~d~v~d~~g 106 (174)
T d1yb5a2 97 GIDIIIEMLA 106 (174)
T ss_dssp CEEEEEESCH
T ss_pred CceEEeeccc
Confidence 5999999877
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=98.02 E-value=8.8e-06 Score=60.57 Aligned_cols=82 Identities=16% Similarity=0.266 Sum_probs=61.7
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
+...+++||.|+|.|+ ||.+++++..|.+.|.+|.++.|+.++.+++.+.+...+ .+..+..| +.
T Consensus 11 ~~~~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~-~~~~~~~~--~~----------- 75 (170)
T d1nyta1 11 RLSFIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-SIQALSMD--EL----------- 75 (170)
T ss_dssp HHTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-SEEECCSG--GG-----------
T ss_pred HcCCCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcc-cccccccc--cc-----------
Confidence 4567899999999997 777999999999999999999999999998887765543 23322222 10
Q ss_pred hhcCCCccEEEeCCCCCCC
Q 024752 86 SQFDGKLNILINNAGTFIP 104 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~ 104 (263)
. ..+.|++||+...+..
T Consensus 76 -~-~~~~dliIN~Tp~G~~ 92 (170)
T d1nyta1 76 -E-GHEFDLIINATSSGIS 92 (170)
T ss_dssp -T-TCCCSEEEECCSCGGG
T ss_pred -c-ccccceeecccccCcc
Confidence 1 1468999999876543
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=97.99 E-value=2.6e-05 Score=57.24 Aligned_cols=74 Identities=16% Similarity=0.221 Sum_probs=57.4
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
++++|.++|.|+ |.+|+.+++.|...|+ ++.++.|+.++.+++.+++. . ... ++ +++.+.+
T Consensus 21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~---~--~~~--~~---~~~~~~l------- 82 (159)
T d1gpja2 21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG---G--EAV--RF---DELVDHL------- 82 (159)
T ss_dssp CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT---C--EEC--CG---GGHHHHH-------
T ss_pred CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhh---c--ccc--cc---hhHHHHh-------
Confidence 689999999998 9999999999999998 69999999999888887753 2 221 22 2333333
Q ss_pred CCCccEEEeCCCCC
Q 024752 89 DGKLNILINNAGTF 102 (263)
Q Consensus 89 ~~~id~li~~ag~~ 102 (263)
...|++|++.+..
T Consensus 83 -~~~Divi~atss~ 95 (159)
T d1gpja2 83 -ARSDVVVSATAAP 95 (159)
T ss_dssp -HTCSEEEECCSSS
T ss_pred -ccCCEEEEecCCC
Confidence 3679999998853
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.96 E-value=2.4e-05 Score=58.10 Aligned_cols=75 Identities=13% Similarity=0.085 Sum_probs=55.7
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
.|+|+|.|| |.+|+.+|+.|++.|++|++++|+.++++++.+++ ........+..........+ ...
T Consensus 2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~----~~~~~~~~~~~~~~~~~~~i--------~~~ 68 (182)
T d1e5qa1 2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV----QHSTPISLDVNDDAALDAEV--------AKH 68 (182)
T ss_dssp CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC----TTEEEEECCTTCHHHHHHHH--------TTS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc----cccccccccccchhhhHhhh--------hcc
Confidence 689999987 99999999999999999999999999888776542 33444455666655555554 345
Q ss_pred cEEEeCCC
Q 024752 93 NILINNAG 100 (263)
Q Consensus 93 d~li~~ag 100 (263)
|.++....
T Consensus 69 ~~~i~~~~ 76 (182)
T d1e5qa1 69 DLVISLIP 76 (182)
T ss_dssp SEEEECSC
T ss_pred ceeEeecc
Confidence 66665443
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=97.96 E-value=4e-05 Score=56.91 Aligned_cols=83 Identities=13% Similarity=0.211 Sum_probs=61.5
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
+...++++|.++|.|+ ||.+++++..|.+.+.+|.++.|+.+++++..+.+.... .+.....|-.
T Consensus 11 ~~~~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~-~~~~~~~~~~------------- 75 (171)
T d1p77a1 11 RLNWLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG-NIQAVSMDSI------------- 75 (171)
T ss_dssp HTTCCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS-CEEEEEGGGC-------------
T ss_pred HcCCCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhcc-ccchhhhccc-------------
Confidence 3467899999999987 666999999999988899999999999999888876433 3444444421
Q ss_pred hhcCCCccEEEeCCCCCCCC
Q 024752 86 SQFDGKLNILINNAGTFIPK 105 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~ 105 (263)
.. ...|++||+....-..
T Consensus 76 -~~-~~~diiIN~tp~g~~~ 93 (171)
T d1p77a1 76 -PL-QTYDLVINATSAGLSG 93 (171)
T ss_dssp -CC-SCCSEEEECCCC----
T ss_pred -cc-cccceeeecccccccc
Confidence 11 5789999998876543
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=97.92 E-value=2.3e-05 Score=58.52 Aligned_cols=82 Identities=13% Similarity=0.207 Sum_probs=58.5
Q ss_pred CCCC-CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 9 WSLK-GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 9 ~~~~-~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
.+++ |++|+|+||+|++|..+++.....|++|+.+++++++.+... ++ |..-. .|-++++-.++ +++.
T Consensus 24 ~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~-~l---Ga~~v---i~~~~~d~~~~----v~~~ 92 (179)
T d1qora2 24 YEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KA---GAWQV---INYREEDLVER----LKEI 92 (179)
T ss_dssp SCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH---TCSEE---EETTTSCHHHH----HHHH
T ss_pred hCCCCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH-hc---CCeEE---EECCCCCHHHH----HHHH
Confidence 4443 899999999999999999999999999999999998876543 22 43322 35555433333 3332
Q ss_pred c-CCCccEEEeCCCC
Q 024752 88 F-DGKLNILINNAGT 101 (263)
Q Consensus 88 ~-~~~id~li~~ag~ 101 (263)
. +..+|+++.+.|.
T Consensus 93 t~g~g~d~v~d~~g~ 107 (179)
T d1qora2 93 TGGKKVRVVYDSVGR 107 (179)
T ss_dssp TTTCCEEEEEECSCG
T ss_pred hCCCCeEEEEeCccH
Confidence 2 3469999999884
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.87 E-value=0.00035 Score=51.47 Aligned_cols=81 Identities=23% Similarity=0.283 Sum_probs=56.5
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
+|.+|+|.|+ |++|...++.+...|+ +|+++++++++++.. ++ .|.... +..+-.+... ..+.+...++.
T Consensus 26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a-~~---~Ga~~~-~~~~~~~~~~---~~~~~~~~~g~ 96 (171)
T d1pl8a2 26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA-KE---IGADLV-LQISKESPQE---IARKVEGQLGC 96 (171)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HH---TTCSEE-EECSSCCHHH---HHHHHHHHHTS
T ss_pred CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHH-HH---hCCccc-cccccccccc---ccccccccCCC
Confidence 4789999987 9999999999999999 799999999877644 23 343322 2233333333 33444444446
Q ss_pred CccEEEeCCCC
Q 024752 91 KLNILINNAGT 101 (263)
Q Consensus 91 ~id~li~~ag~ 101 (263)
.+|++|.++|.
T Consensus 97 g~Dvvid~~G~ 107 (171)
T d1pl8a2 97 KPEVTIECTGA 107 (171)
T ss_dssp CCSEEEECSCC
T ss_pred CceEEEeccCC
Confidence 79999999994
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.85 E-value=1.5e-05 Score=50.78 Aligned_cols=43 Identities=26% Similarity=0.286 Sum_probs=38.5
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHH
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR 53 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~ 53 (263)
.++++++|+||+||+|...++.+...|++|+.+.+++++.+-+
T Consensus 30 ~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~ 72 (77)
T d1o8ca2 30 PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL 72 (77)
T ss_dssp GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred cCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence 4688999999999999999998889999999999998877544
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.83 E-value=4.3e-05 Score=54.13 Aligned_cols=74 Identities=15% Similarity=0.111 Sum_probs=58.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
+.|+|.|+ |.+|+.+++.|.+.|+.|++++++++..++...+. ...++..|.++++.++++- -...|
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~-----~~~vi~Gd~~~~~~l~~~~-------i~~a~ 67 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-----DALVINGDCTKIKTLEDAG-------IEDAD 67 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----SSEEEESCTTSHHHHHHTT-------TTTCS
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh-----hhhhccCcccchhhhhhcC-------hhhhh
Confidence 36889998 99999999999999999999999998877665431 3567889999998776652 14678
Q ss_pred EEEeCCC
Q 024752 94 ILINNAG 100 (263)
Q Consensus 94 ~li~~ag 100 (263)
.++....
T Consensus 68 ~vv~~t~ 74 (132)
T d1lssa_ 68 MYIAVTG 74 (132)
T ss_dssp EEEECCS
T ss_pred hhcccCC
Confidence 8877543
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=97.71 E-value=0.00014 Score=54.24 Aligned_cols=81 Identities=16% Similarity=0.214 Sum_probs=54.9
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc-C
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF-D 89 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~ 89 (263)
+|.+|+|+|+ |++|...++.+...|+ +|+++++++++++.. ++ .|..... |.++. +..+..+++.+.. +
T Consensus 28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-~~---lGa~~vi---~~~~~-~~~~~~~~i~~~~~~ 98 (182)
T d1vj0a2 28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EE---IGADLTL---NRRET-SVEERRKAIMDITHG 98 (182)
T ss_dssp BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HH---TTCSEEE---ETTTS-CHHHHHHHHHHHTTT
T ss_pred CCCEEEEECC-Cccchhheeccccccccccccccccccccccc-cc---ccceEEE---ecccc-chHHHHHHHHHhhCC
Confidence 5899999997 8999999999999998 799999999887544 33 3433222 32221 2222333334433 2
Q ss_pred CCccEEEeCCCC
Q 024752 90 GKLNILINNAGT 101 (263)
Q Consensus 90 ~~id~li~~ag~ 101 (263)
..+|++|.++|.
T Consensus 99 ~g~Dvvid~vG~ 110 (182)
T d1vj0a2 99 RGADFILEATGD 110 (182)
T ss_dssp SCEEEEEECSSC
T ss_pred CCceEEeecCCc
Confidence 359999999985
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=97.71 E-value=8.2e-05 Score=55.10 Aligned_cols=74 Identities=20% Similarity=0.279 Sum_probs=52.6
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
+|++|+|+||+|++|...++.....|++|+.+++++++.+... +.|..... |..+ . ..++.. +..
T Consensus 27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~----~lGa~~~i---~~~~--~----~~~~~~--~~g 91 (171)
T d1iz0a2 27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL----ALGAEEAA---TYAE--V----PERAKA--WGG 91 (171)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH----HTTCSEEE---EGGG--H----HHHHHH--TTS
T ss_pred CCCEEEEEeccccchhhhhhhhccccccccccccccccccccc----ccccceee---ehhh--h----hhhhhc--ccc
Confidence 6899999999999999999998899999999999887665443 23443222 3222 1 122222 257
Q ss_pred ccEEEeCCC
Q 024752 92 LNILINNAG 100 (263)
Q Consensus 92 id~li~~ag 100 (263)
+|+++.+.|
T Consensus 92 ~D~v~d~~G 100 (171)
T d1iz0a2 92 LDLVLEVRG 100 (171)
T ss_dssp EEEEEECSC
T ss_pred ccccccccc
Confidence 999999876
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=97.69 E-value=9e-05 Score=57.34 Aligned_cols=81 Identities=22% Similarity=0.235 Sum_probs=56.6
Q ss_pred CCCCCEEEEecCC----------------CchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCC
Q 024752 10 SLKGMTALVTGGT----------------KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKI 73 (263)
Q Consensus 10 ~~~~k~vlVtGas----------------~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 73 (263)
||+||+||||+|. |-.|.+||+.+..+|++|.++.-.... .....+.. ..+..
T Consensus 3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~---------~~p~~~~~--~~~~t 71 (223)
T d1u7za_ 3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL---------PTPPFVKR--VDVMT 71 (223)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC---------CCCTTEEE--EECCS
T ss_pred ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc---------Cccccccc--ceehh
Confidence 7899999999885 789999999999999999887765431 01112332 23444
Q ss_pred HHHHHHHHHHHHhhcCCCccEEEeCCCCCCCC
Q 024752 74 RAQREKLMETVSSQFDGKLNILINNAGTFIPK 105 (263)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~ 105 (263)
.++....+.+ .+ ...|++|++|++....
T Consensus 72 ~~~m~~~~~~---~~-~~~D~~i~aAAvsDf~ 99 (223)
T d1u7za_ 72 ALEMEAAVNA---SV-QQQNIFIGCAAVADYR 99 (223)
T ss_dssp HHHHHHHHHH---HG-GGCSEEEECCBCCSEE
T ss_pred hHHHHHHHHh---hh-ccceeEeeeechhhhh
Confidence 4555444443 33 4679999999998653
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=97.63 E-value=0.00053 Score=49.17 Aligned_cols=112 Identities=9% Similarity=0.097 Sum_probs=68.3
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchhHHHHHHHHHhc---CCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSK---GLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
+++++.|.|+ |.+|..+|..|+.+|. .|++++++++..+....++... .........|. ++
T Consensus 4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~~---------- 69 (146)
T d1ez4a1 4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---SD---------- 69 (146)
T ss_dssp TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---GG----------
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---HH----------
Confidence 3567888896 9999999999999884 7999999998877666666541 22233333342 11
Q ss_pred hcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEc
Q 024752 87 QFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFIS 149 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vs 149 (263)
. ..-|++|..||..... .++-.+.+..|. .+++...+.+.+.. .+.++++|
T Consensus 70 -~-~~adivvitag~~~~~------g~~r~~l~~~N~----~i~~~~~~~i~~~~p~aivivvt 121 (146)
T d1ez4a1 70 -C-KDADLVVITAGAPQKP------GESRLDLVNKNL----NILSSIVKPVVDSGFDGIFLVAA 121 (146)
T ss_dssp -G-TTCSEEEECCCC----------------CHHHHH----HHHHHHHHHHHHTTCCSEEEECS
T ss_pred -h-ccccEEEEecccccCC------CCCHHHHHHHHH----HHHHHHHHHHhhcCCCcEEEEeC
Confidence 1 3579999999964321 223344455665 45555555556554 34555544
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=97.51 E-value=0.00028 Score=51.85 Aligned_cols=80 Identities=14% Similarity=0.174 Sum_probs=54.6
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
.+++++|.|++|++|..+++.+...|+ +|+++++++++.+... + .|.... .|.++++-.++..+. ..++
T Consensus 27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~-~---~Ga~~~---i~~~~~~~~~~~~~~---~~~~ 96 (170)
T d1jvba2 27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-R---AGADYV---INASMQDPLAEIRRI---TESK 96 (170)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-H---HTCSEE---EETTTSCHHHHHHHH---TTTS
T ss_pred CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHH-H---cCCcee---eccCCcCHHHHHHHH---hhcc
Confidence 478999999999999999999998885 8999999987655443 2 243322 233333333333222 1234
Q ss_pred CccEEEeCCCC
Q 024752 91 KLNILINNAGT 101 (263)
Q Consensus 91 ~id~li~~ag~ 101 (263)
.+|+++.++|.
T Consensus 97 ~~d~vid~~g~ 107 (170)
T d1jvba2 97 GVDAVIDLNNS 107 (170)
T ss_dssp CEEEEEESCCC
T ss_pred cchhhhccccc
Confidence 69999999984
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.47 E-value=0.00017 Score=54.11 Aligned_cols=104 Identities=14% Similarity=0.196 Sum_probs=62.3
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCe-EEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAI-VHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
+++|||+||+||+|...++.....|++ |+.+++++++...+..++ +.... .|.++++ ..+.+.++ .+..
T Consensus 31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~---gad~v---i~~~~~~-~~~~~~~~---~~~G 100 (187)
T d1vj1a2 31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL---GFDAA---VNYKTGN-VAEQLREA---CPGG 100 (187)
T ss_dssp CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS---CCSEE---EETTSSC-HHHHHHHH---CTTC
T ss_pred CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc---cceEE---eeccchh-HHHHHHHH---hccC
Confidence 489999999999999999998889996 555667766655555443 33322 2444332 23333333 2246
Q ss_pred ccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccc
Q 024752 92 LNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGV 154 (263)
Q Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~ 154 (263)
+|+++.+.|. +.+ +..++.++. +|+++.+++..+.
T Consensus 101 vDvv~D~vGg-----------~~~---------------~~~~~~l~~--~G~iv~~G~~s~~ 135 (187)
T d1vj1a2 101 VDVYFDNVGG-----------DIS---------------NTVISQMNE--NSHIILCGQISQY 135 (187)
T ss_dssp EEEEEESSCH-----------HHH---------------HHHHTTEEE--EEEEEEC------
T ss_pred ceEEEecCCc-----------hhH---------------HHHhhhccc--cccEEEecccccc
Confidence 9999999982 111 223333433 6999999876654
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=97.39 E-value=0.00032 Score=51.97 Aligned_cols=78 Identities=14% Similarity=0.119 Sum_probs=52.6
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcC-
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFD- 89 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~- 89 (263)
+|.+|+|.|+ |++|...++.+...|+ +|+++++++++++... ++ |.. ++ .|.++++.. +++.+..+
T Consensus 27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~-~l---Ga~-~~--i~~~~~~~~----~~v~~~t~g 94 (174)
T d1jqba2 27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK-FY---GAT-DI--LNYKNGHIE----DQVMKLTNG 94 (174)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH-HH---TCS-EE--ECGGGSCHH----HHHHHHTTT
T ss_pred CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHH-hh---Ccc-cc--ccccchhHH----HHHHHHhhc
Confidence 4889999986 8999999999999998 7999999988765443 23 332 22 233332222 23333332
Q ss_pred CCccEEEeCCCC
Q 024752 90 GKLNILINNAGT 101 (263)
Q Consensus 90 ~~id~li~~ag~ 101 (263)
..+|++|.++|.
T Consensus 95 ~G~D~vid~~g~ 106 (174)
T d1jqba2 95 KGVDRVIMAGGG 106 (174)
T ss_dssp SCEEEEEECSSC
T ss_pred cCcceEEEccCC
Confidence 359999999995
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=97.37 E-value=0.00078 Score=49.41 Aligned_cols=45 Identities=22% Similarity=0.254 Sum_probs=39.9
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHH
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEW 57 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~ 57 (263)
++|.|+|.|+ ||.+++++..|.+.|+ ++.++.|+.++.+.+.+.+
T Consensus 16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~ 61 (167)
T d1npya1 16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY 61 (167)
T ss_dssp TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence 7899999988 7889999999999998 7999999999888877654
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.35 E-value=0.003 Score=45.70 Aligned_cols=117 Identities=14% Similarity=0.095 Sum_probs=74.0
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchhHHHHHHHHHhc----CCceEEEeccCCCHHHHHHHH
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSK----GLQVSGSVCDLKIRAQREKLM 81 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~ 81 (263)
.-.++..+|.|.|+ |.+|..+|..|+..|. .+++++++++.++..+.++... +........|..
T Consensus 14 ~~~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~--------- 83 (159)
T d2ldxa1 14 EDKLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYN--------- 83 (159)
T ss_dssp CCCCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGG---------
T ss_pred cccCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchh---------
Confidence 33456667888896 9999999999999986 7999999998887777777642 222222222321
Q ss_pred HHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-CCceEEEEcc
Q 024752 82 ETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-GNGNIIFISS 150 (263)
Q Consensus 82 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS 150 (263)
.. ..-|++|..||...... .+.. +.++.| ..+.+.+.+.+.+. .++.+++++-
T Consensus 84 -----~~-~~adivvitag~~~~~~---~~R~---dll~~N----~~i~~~i~~~i~~~~p~~ivivvtN 137 (159)
T d2ldxa1 84 -----VS-ANSKLVIITAGARMVSG---QTRL---DLLQRN----VAIMKAIVPGVIQNSPDCKIIVVTN 137 (159)
T ss_dssp -----GG-TTEEEEEECCSCCCCTT---TCSS---CTTHHH----HHHHHHHTTTHHHHSTTCEEEECSS
T ss_pred -----hh-ccccEEEEecccccCCC---CCHH---HHHHHH----HHHHHHHHHHHhccCCCeEEEEeCC
Confidence 11 46799999999754322 1111 123333 35566677766654 4566666654
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=97.33 E-value=0.0056 Score=44.26 Aligned_cols=118 Identities=13% Similarity=0.090 Sum_probs=75.9
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchhHHHHHHHHHhc----CCceEEEeccCCCHHHHHHHH
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSK----GLQVSGSVCDLKIRAQREKLM 81 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~ 81 (263)
...++.+++.|.|+ |.+|.+++..++.+|. .+++++++++..+..+.++... +.....-..|.. +
T Consensus 15 ~~~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~---~----- 85 (160)
T d1i0za1 15 EATVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYS---V----- 85 (160)
T ss_dssp CCCCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGG---G-----
T ss_pred cccCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchh---h-----
Confidence 33456778888896 9999999999999987 7999999998887777776542 222222222322 1
Q ss_pred HHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEccc
Q 024752 82 ETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISSV 151 (263)
Q Consensus 82 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~ 151 (263)
. ..-|++|..||..... ..+. .+.++.|. .+++.+.+.+.+.. .+-++++|-.
T Consensus 86 ------~-~~adiVVitAg~~~~~---g~tR---~~l~~~N~----~i~~~i~~~i~~~~p~aiiivvtNP 139 (160)
T d1i0za1 86 ------T-ANSKIVVVTAGVRQQE---GESR---LNLVQRNV----NVFKFIIPQIVKYSPDCIIIVVSNP 139 (160)
T ss_dssp ------G-TTCSEEEECCSCCCCT---TCCG---GGGHHHHH----HHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred ------c-ccccEEEEecCCcccc---Ccch---HHHHHHHH----HHHHHHHHHHHhcCCCcEEEEeCCc
Confidence 1 3569999999975332 1222 23344454 45666666666643 4566666543
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.33 E-value=0.0014 Score=47.94 Aligned_cols=77 Identities=16% Similarity=0.117 Sum_probs=52.5
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
.|++++|.|+ |++|...++.+...|++|+++++++++++.. +++ |....+...+-.+ . . +...+.
T Consensus 27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a-~~l---Ga~~~i~~~~~~~---~---~----~~~~~~ 91 (168)
T d1piwa2 27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA-MKM---GADHYIATLEEGD---W---G----EKYFDT 91 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH-HHH---TCSEEEEGGGTSC---H---H----HHSCSC
T ss_pred CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHh-hcc---CCcEEeeccchHH---H---H----Hhhhcc
Confidence 5899999987 8999999988888899999999999877644 333 4332222222211 1 1 112257
Q ss_pred ccEEEeCCCCCC
Q 024752 92 LNILINNAGTFI 103 (263)
Q Consensus 92 id~li~~ag~~~ 103 (263)
+|+++.+.+...
T Consensus 92 ~d~vi~~~~~~~ 103 (168)
T d1piwa2 92 FDLIVVCASSLT 103 (168)
T ss_dssp EEEEEECCSCST
T ss_pred cceEEEEecCCc
Confidence 899999987543
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=97.32 E-value=0.0001 Score=54.39 Aligned_cols=104 Identities=18% Similarity=0.113 Sum_probs=68.3
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
.++++|||+||+||+|...++.....|++|+.+.+++++.+.+.+ .+..... | .++ ...+.+....++
T Consensus 22 ~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~----lGad~vi---~---~~~--~~~~~~~~~~~~ 89 (167)
T d1tt7a2 22 PEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ----LGASEVI---S---RED--VYDGTLKALSKQ 89 (167)
T ss_dssp GGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH----HTCSEEE---E---HHH--HCSSCCCSSCCC
T ss_pred CCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHh----hcccceE---e---ccc--hhchhhhcccCC
Confidence 357789999999999999999888899999999999887665532 2333222 1 111 111112222235
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccccc
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGV 154 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~ 154 (263)
.+|+++.+.|.. .+...++.++. +|+++.++...+.
T Consensus 90 gvd~vid~vgg~--------------------------~~~~~~~~l~~--~G~iv~~G~~~g~ 125 (167)
T d1tt7a2 90 QWQGAVDPVGGK--------------------------QLASLLSKIQY--GGSVAVSGLTGGG 125 (167)
T ss_dssp CEEEEEESCCTH--------------------------HHHHHHTTEEE--EEEEEECCCSSCS
T ss_pred CceEEEecCcHH--------------------------HHHHHHHHhcc--CceEEEeeccCCC
Confidence 799999998841 12233344434 6899999877654
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=97.30 E-value=0.00046 Score=51.01 Aligned_cols=80 Identities=19% Similarity=0.271 Sum_probs=54.0
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
+|.+|+|.|+ +|+|...+..+...|+ +|+++++++++.+...+ .+..-.....+- ++.+.+..+.. .++
T Consensus 28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~----~Ga~~~i~~~~~--~~~~~~~~~~~---~~~ 97 (176)
T d2jhfa2 28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE----VGATECVNPQDY--KKPIQEVLTEM---SNG 97 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCSEEECGGGC--SSCHHHHHHHH---TTS
T ss_pred CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHH----hCCeeEEecCCc--hhHHHHHHHHH---hcC
Confidence 4789999999 6899999999999986 89999999998764432 233222212222 12233333332 235
Q ss_pred CccEEEeCCCC
Q 024752 91 KLNILINNAGT 101 (263)
Q Consensus 91 ~id~li~~ag~ 101 (263)
.+|++|.+.|.
T Consensus 98 G~D~vid~~G~ 108 (176)
T d2jhfa2 98 GVDFSFEVIGR 108 (176)
T ss_dssp CBSEEEECSCC
T ss_pred CCCEEEecCCc
Confidence 79999999994
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.29 E-value=0.0039 Score=44.37 Aligned_cols=110 Identities=12% Similarity=0.073 Sum_probs=66.5
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCch--hHHHHHHHHHh----cCCceE--EEeccCCCHHHHHHHHHHH
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNET--ELNQRIQEWKS----KGLQVS--GSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~--~~~~~~~~~~~----~~~~~~--~~~~D~~~~~~~~~~~~~~ 84 (263)
++.|.||+|.+|.++|..++.+|. +++++++++. +++....++.. ....+. ....+ +.+
T Consensus 2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~--d~~--------- 70 (145)
T d1hyea1 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDE--NLR--------- 70 (145)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETT--CGG---------
T ss_pred EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcc--hHH---------
Confidence 589999999999999999999985 7999998863 34444445543 122222 21211 111
Q ss_pred HhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEE
Q 024752 85 SSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFI 148 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~v 148 (263)
.+ ..-|++|..||..... ..+. .+.++.|.. +++.+.+.+.+.....++.+
T Consensus 71 --~l-~~aDvVVitAG~~~~~---g~sR---~dl~~~Na~----iv~~i~~~i~~~~~~~iivV 121 (145)
T d1hyea1 71 --II-DESDVVIITSGVPRKE---GMSR---MDLAKTNAK----IVGKYAKKIAEICDTKIFVI 121 (145)
T ss_dssp --GG-TTCSEEEECCSCCCCT---TCCH---HHHHHHHHH----HHHHHHHHHHHHCCCEEEEC
T ss_pred --Hh-ccceEEEEecccccCC---CCCh---hhhhhhhHH----HHHHHHHHHhccCCCeEEEE
Confidence 11 4579999999964322 1233 345666664 45555555555444455544
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=97.27 E-value=0.0018 Score=47.84 Aligned_cols=80 Identities=18% Similarity=0.200 Sum_probs=54.2
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
+|.+|+|.|+ ||+|...++.+...|+ +|+++++++++++... ++ |....+..-|-.+ ..+...+. ..+.
T Consensus 29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak-~~---GA~~~in~~~~~~--~~~~~~~~---~~g~ 98 (176)
T d1d1ta2 29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAM-AV---GATECISPKDSTK--PISEVLSE---MTGN 98 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HH---TCSEEECGGGCSS--CHHHHHHH---HHTS
T ss_pred CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHH-hc---CCcEEECccccch--HHHHHHHH---hccc
Confidence 4899999986 8999999999999996 8999999999887443 32 4433332223221 11222211 1235
Q ss_pred CccEEEeCCCC
Q 024752 91 KLNILINNAGT 101 (263)
Q Consensus 91 ~id~li~~ag~ 101 (263)
.+|++|.+.|.
T Consensus 99 G~d~vi~~~g~ 109 (176)
T d1d1ta2 99 NVGYTFEVIGH 109 (176)
T ss_dssp CCCEEEECSCC
T ss_pred cceEEEEeCCc
Confidence 79999999994
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.27 E-value=0.0036 Score=44.73 Aligned_cols=113 Identities=14% Similarity=0.087 Sum_probs=71.4
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchhHHHHHHHHHhc----CCceEEEeccCCCHHHHHHHHHHHH
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSK----GLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
.++++.|.|+ |.+|.++|..++..|. ++++++++++.++....++... ...+.....|. ++
T Consensus 5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~---~~--------- 71 (148)
T d1ldna1 5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY---DD--------- 71 (148)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG---GG---------
T ss_pred CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH---HH---------
Confidence 4678888897 9999999999999886 6999999998887777777642 22233322332 11
Q ss_pred hhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-CCceEEEEcc
Q 024752 86 SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-GNGNIIFISS 150 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS 150 (263)
+ ..-|++|..+|...... .+ -.+.+..|. .+++.+.+.+.+. +.+.+++++-
T Consensus 72 --l-~daDvvvitag~~~~~~---~~---R~dl~~~N~----~i~~~i~~~i~~~~p~a~~ivvtN 124 (148)
T d1ldna1 72 --C-RDADLVVICAGANQKPG---ET---RLDLVDKNI----AIFRSIVESVMASGFQGLFLVATN 124 (148)
T ss_dssp --T-TTCSEEEECCSCCCCTT---TC---SGGGHHHHH----HHHHHHHHHHHHHTCCSEEEECSS
T ss_pred --h-ccceeEEEecccccccC---cc---hhHHHHHHH----HHHHHHHHHHHhhCCCceEEEecC
Confidence 1 35699999999753321 11 122334443 4455555555553 4566666654
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.26 E-value=0.0015 Score=46.55 Aligned_cols=115 Identities=15% Similarity=0.047 Sum_probs=67.6
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
++.|.||+|.+|.++|..|+.+|. ++++++.++.+.+ ..++...... .....-+. ..+..+.+ ..-
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~--a~Dl~~~~~~-~~~~~~~~-~~~~~~~~--------~~a 69 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV--AADLSHIETR-ATVKGYLG-PEQLPDCL--------KGC 69 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH--HHHHTTSSSS-CEEEEEES-GGGHHHHH--------TTC
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh--hHHHhhhhhh-cCCCeEEc-CCChHHHh--------CCC
Confidence 688999999999999999999986 6999998875433 2333322111 11111111 22222222 457
Q ss_pred cEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-CCceEEEEccc
Q 024752 93 NILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-GNGNIIFISSV 151 (263)
Q Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~ 151 (263)
|++|..||..... ..+ -.+.++.|..-. +.+.+.+.+. ..+.++.+|..
T Consensus 70 DivVitag~~~~~---g~s---R~~ll~~N~~i~----~~i~~~i~~~~p~~iiivvtNP 119 (144)
T d1mlda1 70 DVVVIPAGVPRKP---GMT---RDDLFNTNATIV----ATLTAACAQHCPDAMICIISNP 119 (144)
T ss_dssp SEEEECCSCCCCT---TCC---GGGGHHHHHHHH----HHHHHHHHHHCTTSEEEECSSC
T ss_pred CEEEECCCcCCCC---CCC---cchHHHHHHHHH----HHHHHHHHhcCCCeEEEEecCc
Confidence 9999999964322 112 233466666544 4444444544 35677776653
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=97.25 E-value=0.00015 Score=51.22 Aligned_cols=73 Identities=21% Similarity=0.181 Sum_probs=55.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
|.++|.|+ |-+|+.+++.|.+.|+.|++++.+++..++.. ..+. ..+..|.++++.+.++-- .+.|
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~----~~~~--~~~~gd~~~~~~l~~a~i-------~~a~ 66 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SYAT--HAVIANATEENELLSLGI-------RNFE 66 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT----TTCS--EEEECCTTCTTHHHHHTG-------GGCS
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH----HhCC--cceeeecccchhhhccCC-------cccc
Confidence 45777766 78899999999999999999999998776653 2233 455689999887766511 3568
Q ss_pred EEEeCCC
Q 024752 94 ILINNAG 100 (263)
Q Consensus 94 ~li~~ag 100 (263)
.+|...+
T Consensus 67 ~vi~~~~ 73 (134)
T d2hmva1 67 YVIVAIG 73 (134)
T ss_dssp EEEECCC
T ss_pred EEEEEcC
Confidence 8777665
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.24 E-value=0.00022 Score=53.08 Aligned_cols=43 Identities=26% Similarity=0.286 Sum_probs=37.9
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHH
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR 53 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~ 53 (263)
.+++++||+||+||+|...++.....|++|+.+++++++.+.+
T Consensus 30 ~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~ 72 (177)
T d1o89a2 30 PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL 72 (177)
T ss_dssp GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred CCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH
Confidence 3456899999999999999999999999999999999886544
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=97.23 E-value=0.00092 Score=50.32 Aligned_cols=116 Identities=15% Similarity=0.174 Sum_probs=67.1
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
.|.+|+|.|+ |++|...+..+...|+ +|+++++++++++... +.+.... .+-.+ +++.+.+.++.. +.
T Consensus 25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~----~~Ga~~~---~~~~~-~~~~~~i~~~t~--g~ 93 (195)
T d1kola2 25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK----AQGFEIA---DLSLD-TPLHEQIAALLG--EP 93 (195)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH----HTTCEEE---ETTSS-SCHHHHHHHHHS--SS
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhh----hccccEE---EeCCC-cCHHHHHHHHhC--CC
Confidence 4889999986 8999888888878888 7999999987765443 2233221 12222 233333333322 24
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcc
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISS 150 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS 150 (263)
.+|++|.+.|......... ..+..+.-..++.+...++. +|+++.++-
T Consensus 94 g~D~vid~vG~~~~~~~~~----------~~~~~~~~~~l~~~~~~~r~--gG~v~~~G~ 141 (195)
T d1kola2 94 EVDCAVDAVGFEARGHGHE----------GAKHEAPATVLNSLMQVTRV--AGKIGIPGL 141 (195)
T ss_dssp CEEEEEECCCTTCBCSSTT----------GGGSBCTTHHHHHHHHHEEE--EEEEEECSC
T ss_pred CcEEEEECccccccCCccc----------ceeecCcHHHHHHHHHHHhc--CCEEEEeee
Confidence 6999999998543221110 00111222233444444443 689998874
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=97.21 E-value=0.0015 Score=48.04 Aligned_cols=78 Identities=15% Similarity=0.256 Sum_probs=51.7
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCe-EEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAI-VHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
.|.+|+|.|+ |++|...++.+...|+. |+++++++++++.. +++ +.. .+ .|.++++ . .+++++..++
T Consensus 28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a-~~~---Ga~-~~--i~~~~~~-~---~~~i~~~t~g 95 (174)
T d1f8fa2 28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQL---GAT-HV--INSKTQD-P---VAAIKEITDG 95 (174)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHH---TCS-EE--EETTTSC-H---HHHHHHHTTS
T ss_pred CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHH-HHc---CCe-EE--EeCCCcC-H---HHHHHHHcCC
Confidence 4889999997 89999999998888985 55667777665544 333 332 22 2444322 2 2333333346
Q ss_pred CccEEEeCCCC
Q 024752 91 KLNILINNAGT 101 (263)
Q Consensus 91 ~id~li~~ag~ 101 (263)
.+|++|.+.|.
T Consensus 96 g~D~vid~~G~ 106 (174)
T d1f8fa2 96 GVNFALESTGS 106 (174)
T ss_dssp CEEEEEECSCC
T ss_pred CCcEEEEcCCc
Confidence 79999999994
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=97.21 E-value=0.0046 Score=45.40 Aligned_cols=80 Identities=16% Similarity=0.167 Sum_probs=52.5
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
.|.+|+|.|+ |+||...++.+...|+ +|+++++++++++.. ++ .+....+ ...- .++......+.. .++
T Consensus 28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a-~~---~Ga~~~i-~~~~-~~~~~~~~~~~~---~~~ 97 (174)
T d1e3ia2 28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-KA---LGATDCL-NPRE-LDKPVQDVITEL---TAG 97 (174)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HH---TTCSEEE-CGGG-CSSCHHHHHHHH---HTS
T ss_pred CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHH-HH---hCCCccc-CCcc-chhhhhhhHhhh---hcC
Confidence 4789999975 9999999999999999 688899998876433 33 2333222 1111 112223333222 236
Q ss_pred CccEEEeCCCC
Q 024752 91 KLNILINNAGT 101 (263)
Q Consensus 91 ~id~li~~ag~ 101 (263)
.+|++|.++|.
T Consensus 98 G~d~vie~~G~ 108 (174)
T d1e3ia2 98 GVDYSLDCAGT 108 (174)
T ss_dssp CBSEEEESSCC
T ss_pred CCcEEEEeccc
Confidence 79999999994
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=97.19 E-value=0.0021 Score=45.90 Aligned_cols=115 Identities=18% Similarity=0.205 Sum_probs=69.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchhHHHHHHHHHhc----CCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSK----GLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
|++.|.|+ |.+|..++..++.+|. ++++++++++.++....++... ..+......|. ++
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~---~~----------- 66 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW---AA----------- 66 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG---GG-----------
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCH---HH-----------
Confidence 67888895 9999999999999885 7999999998877666666532 22223222232 11
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEcc
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISS 150 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS 150 (263)
. ..-|++|..||...... +.+.++-.+.++.|. .+++.+.+.+.+.. .+-++++|-
T Consensus 67 l-~~adiVVitaG~~~~~~--~~~g~~R~~l~~~N~----~i~~~i~~~i~~~~p~aivivvtN 123 (146)
T d1hyha1 67 L-ADADVVISTLGNIKLQQ--DNPTGDRFAELKFTS----SMVQSVGTNLKESGFHGVLVVISN 123 (146)
T ss_dssp G-TTCSEEEECCSCGGGTC---------CTTHHHHH----HHHHHHHHHHHHTTCCSEEEECSS
T ss_pred h-ccccEEEEecccccccc--ccCCccHHHHHHHHH----HHHHHHHHHHhhcCCCeEEEEecC
Confidence 1 35799999999653211 111112223344554 56666666666654 455555543
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.19 E-value=0.0031 Score=45.80 Aligned_cols=41 Identities=22% Similarity=0.306 Sum_probs=35.7
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHH
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR 53 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~ 53 (263)
+|++|+|.|+ |++|...++.+...|++|+.+++++++++..
T Consensus 27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a 67 (166)
T d1llua2 27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELA 67 (166)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhh
Confidence 4889999886 9999999998889999999999998876543
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=97.18 E-value=0.00088 Score=49.03 Aligned_cols=74 Identities=16% Similarity=0.218 Sum_probs=52.8
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
.|++|+|.|+ |++|...++.+...|++++++++++++.+ ..+++ +.... .|..+++... .. .+.
T Consensus 30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~-~a~~l---Gad~~---i~~~~~~~~~-------~~-~~~ 93 (168)
T d1uufa2 30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKRE-AAKAL---GADEV---VNSRNADEMA-------AH-LKS 93 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHH---TCSEE---EETTCHHHHH-------TT-TTC
T ss_pred CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHH-HHhcc---CCcEE---EECchhhHHH-------Hh-cCC
Confidence 4899999986 89999999988899999999999988764 33443 33322 3555544321 11 257
Q ss_pred ccEEEeCCCC
Q 024752 92 LNILINNAGT 101 (263)
Q Consensus 92 id~li~~ag~ 101 (263)
+|++|.+.|.
T Consensus 94 ~D~vid~~g~ 103 (168)
T d1uufa2 94 FDFILNTVAA 103 (168)
T ss_dssp EEEEEECCSS
T ss_pred Cceeeeeeec
Confidence 9999999985
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=97.15 E-value=0.0071 Score=42.76 Aligned_cols=111 Identities=10% Similarity=-0.007 Sum_probs=69.0
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCc--hhHHHHHHHHHh---cCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNE--TELNQRIQEWKS---KGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~--~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
++.|.|++|.+|.++|..++.++. .+++++.+. +..+....++.. ..........|. ++
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~~----------- 67 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---ED----------- 67 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---GG-----------
T ss_pred eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---HH-----------
Confidence 588999999999999999999986 699998643 334434444443 233333323332 21
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEcc
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISS 150 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS 150 (263)
. ..-|++|..||.... + . ++-.+.++.|. .+++.+.+.+.+.. .+.++.++-
T Consensus 68 ~-~~aDiVvitaG~~~~-~--g---~~R~dl~~~N~----~I~~~i~~~i~~~~p~~i~ivvtN 120 (142)
T d1o6za1 68 T-AGSDVVVITAGIPRQ-P--G---QTRIDLAGDNA----PIMEDIQSSLDEHNDDYISLTTSN 120 (142)
T ss_dssp G-TTCSEEEECCCCCCC-T--T---CCHHHHHHHHH----HHHHHHHHHHHTTCSCCEEEECCS
T ss_pred h-hhcCEEEEecccccc-c--C---CchhhHHHHHH----HHHHHHHHHHHhcCCCceEEEecC
Confidence 1 357999999996432 2 1 23445666666 55666666666654 455665543
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=97.15 E-value=0.0063 Score=44.68 Aligned_cols=115 Identities=10% Similarity=0.018 Sum_probs=66.5
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCC---C----eEEEeeCCc--hhHHHHHHHHHhcCCc-eEEEeccCCCHHHHHHHHH
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFG---A----IVHTCSRNE--TELNQRIQEWKSKGLQ-VSGSVCDLKIRAQREKLME 82 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g---~----~V~~~~r~~--~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~ 82 (263)
.-+|.||||+|.||.+++..|++.. . .+.+.+.+. ..++...-++...... ...... -++. .+.
T Consensus 24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~-~~~~---~~~-- 97 (175)
T d7mdha1 24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSI-GIDP---YEV-- 97 (175)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE-ESCH---HHH--
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccc-cccc---hhh--
Confidence 3479999999999999999999853 2 455556554 3345555555443221 111111 1121 111
Q ss_pred HHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-C-CceEEEEc
Q 024752 83 TVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-G-NGNIIFIS 149 (263)
Q Consensus 83 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~-~~~iv~vs 149 (263)
+ ...|++|..+|.... +.++..+.++.|. .+++...+.+.+. + ..+|+.++
T Consensus 98 -----~-~~aDvVvi~ag~~rk------pg~tR~Dll~~N~----~I~k~~~~~i~~~a~~~~~vlvv~ 150 (175)
T d7mdha1 98 -----F-EDVDWALLIGAKPRG------PGMERAALLDING----QIFADQGKALNAVASKNVKVLVVG 150 (175)
T ss_dssp -----T-TTCSEEEECCCCCCC------TTCCHHHHHHHHH----HHHHHHHHHHHHHSCTTCEEEECS
T ss_pred -----c-cCCceEEEeeccCCC------CCCcHHHHHHHHH----HHHHHHHHHHHhhCCCCcEEEEec
Confidence 2 578999999997432 1233445566664 5566666666663 3 34565554
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.15 E-value=0.0038 Score=44.88 Aligned_cols=114 Identities=12% Similarity=0.115 Sum_probs=67.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC---------eEEEeeCCchhHHHHHHHHHhcC-CceEEEeccCCCHHHHHHHHHH
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGA---------IVHTCSRNETELNQRIQEWKSKG-LQVSGSVCDLKIRAQREKLMET 83 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~---------~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~ 83 (263)
.+|.|+||+|.+|.+++..|++.+. .++...++.+.++....++.... .....+...-.+. +.
T Consensus 5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--- 77 (154)
T d1y7ta1 5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPK----VA--- 77 (154)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHH----HH---
T ss_pred CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchh----hh---
Confidence 3899999999999999999998753 33445556666666655555432 2222222222111 11
Q ss_pred HHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-C-CceEEEEc
Q 024752 84 VSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-G-NGNIIFIS 149 (263)
Q Consensus 84 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~-~~~iv~vs 149 (263)
+ ...|++|..+|..... ..+. .+.+..|+ .+++.+.+.+.+. + .+.++.+|
T Consensus 78 ----~-~~advViitaG~~~~p---g~~r---~dl~~~N~----~i~~~~~~~i~k~a~~~~~vivvs 130 (154)
T d1y7ta1 78 ----F-KDADYALLVGAAPRKA---GMER---RDLLQVNG----KIFTEQGRALAEVAKKDVKVLVVG 130 (154)
T ss_dssp ----T-TTCSEEEECCCCCCCT---TCCH---HHHHHHHH----HHHHHHHHHHHHHSCTTCEEEECS
T ss_pred ----c-ccccEEEeecCcCCCC---CCcH---HHHHHHHH----HHHHHHHHHHHHhCCCCcEEEEec
Confidence 1 4689999999975321 2243 33455555 4555555555653 2 35565555
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=97.13 E-value=0.0037 Score=45.01 Aligned_cols=122 Identities=13% Similarity=0.015 Sum_probs=72.1
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhc----CCceEEEeccCCCHHHHHHHHH
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSK----GLQVSGSVCDLKIRAQREKLME 82 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~ 82 (263)
.|.-|.+++.|.|+ |.+|..++..++..+. ++++++.+++.++....++... +........ ++. +..+
T Consensus 2 ~~~~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~--~~~---~~~~- 74 (154)
T d1pzga1 2 ALVQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE--YSY---EAAL- 74 (154)
T ss_dssp CCCSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE--CSH---HHHH-
T ss_pred ccccCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEecc--Cch---hhhh-
Confidence 45556788888997 9999999999998885 8999999998877666665431 222111111 111 1111
Q ss_pred HHHhhcCCCccEEEeCCCCCCCCC-C-CCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-CCceEEEEcc
Q 024752 83 TVSSQFDGKLNILINNAGTFIPKE-T-TEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-GNGNIIFISS 150 (263)
Q Consensus 83 ~~~~~~~~~id~li~~ag~~~~~~-~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS 150 (263)
..-|++|..+|...... . .+.+. .+.+..|.. +++.+.+.+.+. ..+-++++|.
T Consensus 75 -------~~adiVvitag~~~~~g~~~~~~tR---~~l~~~n~~----iv~~i~~~i~~~~p~aiviivsN 131 (154)
T d1pzga1 75 -------TGADCVIVTAGLTKVPGKPDSEWSR---NDLLPFNSK----IIREIGQNIKKYCPKTFIIVVTN 131 (154)
T ss_dssp -------TTCSEEEECCSCSSCTTCCGGGCCG---GGGHHHHHH----HHHHHHHHHHHHCTTCEEEECCS
T ss_pred -------cCCCeEEEecccccCCCCCCcccch---hhhhhhhHH----HHHHHHHHHHhcCCCcEEEEeCC
Confidence 35799999999764321 1 11222 223444543 344444444544 3456666654
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=97.13 E-value=0.00022 Score=47.02 Aligned_cols=38 Identities=18% Similarity=0.205 Sum_probs=34.3
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCch
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET 48 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~ 48 (263)
|++||+++|.|. |..|+++|+.|.++|++|++.+.+..
T Consensus 2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~ 39 (93)
T d2jfga1 2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT 39 (93)
T ss_dssp CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence 789999999998 55799999999999999999998654
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=97.08 E-value=0.0011 Score=47.58 Aligned_cols=85 Identities=13% Similarity=0.082 Sum_probs=57.6
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
.++.+-|++.|.||.|-+|..+++.|.+.|++|.+.+|+.....+... .+........+ ...+...+.++...
T Consensus 4 ~~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~----~~~~~v~~~~~---~~~~~~v~~~~~~~ 76 (152)
T d2pv7a2 4 TINSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESIL----ANADVVIVSVP---INLTLETIERLKPY 76 (152)
T ss_dssp CSCTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHH----TTCSEEEECSC---GGGHHHHHHHHGGG
T ss_pred ccCCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhh----hhccccccccc---hhhheeeeeccccc
Confidence 456677899999999999999999999999999999999876544322 23334443333 34566666666655
Q ss_pred cCCCccEEEeCCC
Q 024752 88 FDGKLNILINNAG 100 (263)
Q Consensus 88 ~~~~id~li~~ag 100 (263)
. .+=.+++..+.
T Consensus 77 ~-~~~~iiiD~~S 88 (152)
T d2pv7a2 77 L-TENMLLADLTS 88 (152)
T ss_dssp C-CTTSEEEECCS
T ss_pred c-cCCceEEEecc
Confidence 4 22234444443
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=96.96 E-value=0.0054 Score=43.43 Aligned_cols=110 Identities=11% Similarity=0.033 Sum_probs=63.6
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchhHHHHHHHHHhc---CCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSK---GLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
++.|.|+ |.+|.+++..++..+. .+++++++++.++....++... ......... +.+ ..
T Consensus 3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~~-----------~~- 66 (142)
T d1y6ja1 3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DYS-----------DV- 66 (142)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGG-----------GG-
T ss_pred eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cHH-----------Hh-
Confidence 4555586 9999999999999886 7999999998776666666542 111221111 111 12
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-CCceEEEEcc
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-GNGNIIFISS 150 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS 150 (263)
..-|++|..||..... .++-...+..|. .+++.+.+.+.+. +++.++++|-
T Consensus 67 ~~adivvitag~~~~~------~~~r~~l~~~N~----~i~~~i~~~i~~~~p~ai~ivvtN 118 (142)
T d1y6ja1 67 KDCDVIVVTAGANRKP------GETRLDLAKKNV----MIAKEVTQNIMKYYNHGVILVVSN 118 (142)
T ss_dssp TTCSEEEECCCC------------CHHHHHHHHH----HHHHHHHHHHHHHCCSCEEEECSS
T ss_pred CCCceEEEecccccCc------CcchhHHhhHHH----HHHHHHHHHhhccCCCceEEEecC
Confidence 4579999999965321 223345566665 5555666666654 4566666654
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=96.90 E-value=0.0024 Score=43.35 Aligned_cols=40 Identities=18% Similarity=0.185 Sum_probs=35.4
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchh
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE 49 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~ 49 (263)
++++||+++|.|++. +|..-++.|++.|++|++++.....
T Consensus 8 l~l~~k~vlVvG~G~-va~~ka~~ll~~ga~v~v~~~~~~~ 47 (113)
T d1pjqa1 8 CQLRDRDCLIVGGGD-VAERKARLLLEAGARLTVNALTFIP 47 (113)
T ss_dssp ECCBTCEEEEECCSH-HHHHHHHHHHHTTBEEEEEESSCCH
T ss_pred EEeCCCEEEEECCCH-HHHHHHHHHHHCCCeEEEEeccCCh
Confidence 589999999999866 8999999999999999998876654
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=96.89 E-value=0.0044 Score=45.47 Aligned_cols=80 Identities=19% Similarity=0.237 Sum_probs=53.8
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHH-HHHHHHHHHHhhc
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRA-QREKLMETVSSQF 88 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~ 88 (263)
-+|.+|+|.|+ |++|...++.+...|+ +|+.+++++++++... +.+....+ |.++.+ .+.+.... ..
T Consensus 26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~----~lGa~~~i---~~~~~d~~~~~~~~~---~~ 94 (174)
T d1p0fa2 26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI----ELGATECL---NPKDYDKPIYEVICE---KT 94 (174)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH----HTTCSEEE---CGGGCSSCHHHHHHH---HT
T ss_pred CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHH----HcCCcEEE---cCCCchhHHHHHHHH---hc
Confidence 34899999986 8999999999999997 7999999998876553 23433222 222211 12222222 22
Q ss_pred CCCccEEEeCCCC
Q 024752 89 DGKLNILINNAGT 101 (263)
Q Consensus 89 ~~~id~li~~ag~ 101 (263)
++.+|++|-++|.
T Consensus 95 ~~G~d~vid~~g~ 107 (174)
T d1p0fa2 95 NGGVDYAVECAGR 107 (174)
T ss_dssp TSCBSEEEECSCC
T ss_pred CCCCcEEEEcCCC
Confidence 3579999999984
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=96.88 E-value=0.0045 Score=44.25 Aligned_cols=76 Identities=11% Similarity=0.003 Sum_probs=59.3
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCccE
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNI 94 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 94 (263)
.++|.|. +-+|+.+++.|.+.|.+|++++.+++...+...+... ..+.++..|.++++.++++- -.+.|.
T Consensus 5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~--~~~~vi~Gd~~d~~~L~~a~-------i~~a~~ 74 (153)
T d1id1a_ 5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG--DNADVIPGDSNDSSVLKKAG-------IDRCRA 74 (153)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC--TTCEEEESCTTSHHHHHHHT-------TTTCSE
T ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhc--CCcEEEEccCcchHHHHHhc-------cccCCE
Confidence 4777777 6889999999999999999999999876666665543 34677889999998776653 146788
Q ss_pred EEeCCC
Q 024752 95 LINNAG 100 (263)
Q Consensus 95 li~~ag 100 (263)
+|...+
T Consensus 75 vi~~~~ 80 (153)
T d1id1a_ 75 ILALSD 80 (153)
T ss_dssp EEECSS
T ss_pred EEEccc
Confidence 887765
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.88 E-value=0.0075 Score=43.55 Aligned_cols=41 Identities=22% Similarity=0.246 Sum_probs=35.2
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHH
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR 53 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~ 53 (263)
+|++|+|.|+ |++|...++.+...|++|+++++++++++..
T Consensus 27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~ 67 (168)
T d1rjwa2 27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA 67 (168)
T ss_dssp TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhh
Confidence 4789999875 9999999998999999999999998876543
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.86 E-value=0.0012 Score=49.55 Aligned_cols=44 Identities=23% Similarity=0.237 Sum_probs=38.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHH
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWK 58 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~ 58 (263)
|+|.|.|+ |-+|..+|..|+..|++|++++++++.+++..+.++
T Consensus 5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~ 48 (192)
T d1f0ya2 5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIE 48 (192)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHH
T ss_pred EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHH
Confidence 68889998 779999999999999999999999988776665544
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=96.85 E-value=0.015 Score=40.86 Aligned_cols=109 Identities=11% Similarity=0.033 Sum_probs=68.3
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchhHHHHHHHHHhc---CCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSK---GLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
++.|.|+ |.+|.+++..++.++. ++++++++++.++....++... .........|. ++ +
T Consensus 2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~---~~-----------~- 65 (140)
T d1a5za1 2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY---AD-----------L- 65 (140)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG---GG-----------G-
T ss_pred EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcH---HH-----------h-
Confidence 4667786 8999999999998875 7999999998887666665531 22233222221 11 1
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-CCceEEEEc
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-GNGNIIFIS 149 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vs 149 (263)
..-|++|..||...... .+. .+.+..|. .+++.+.+.+.+. +.+.++++|
T Consensus 66 ~~adivvitag~~~~~g---~~r---~dl~~~N~----~I~~~i~~~i~~~~p~aivivvt 116 (140)
T d1a5za1 66 KGSDVVIVAAGVPQKPG---ETR---LQLLGRNA----RVMKEIARNVSKYAPDSIVIVVT 116 (140)
T ss_dssp TTCSEEEECCCCCCCSS---CCH---HHHHHHHH----HHHHHHHHHHHHHCTTCEEEECS
T ss_pred cCCCEEEEecccccCCC---cch---hhhhcccc----chHHHHHHHHHhcCCCcEEEEeC
Confidence 35799999999754321 232 23444554 4566666666664 345555554
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=96.83 E-value=0.022 Score=40.17 Aligned_cols=111 Identities=13% Similarity=0.103 Sum_probs=68.2
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchhHHHHHHHHHhc---CCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSK---GLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
++.|.|+ |.+|.++|..++.+|. ++++++++++.++....+++.. .........+ +.++ .
T Consensus 3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~--~~~~-----------~- 67 (143)
T d1llda1 3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD--DPEI-----------C- 67 (143)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEES--CGGG-----------G-
T ss_pred EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCC--CHHH-----------h-
Confidence 4667786 9999999999999986 7999999998877666666542 1122222221 1111 1
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEcc
Q 024752 90 GKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISS 150 (263)
Q Consensus 90 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS 150 (263)
..-|++|..||..... ..+. .+.+..|. .+++.+.+.+.+.. ++.++.+|-
T Consensus 68 ~daDvVVitaG~~~~~---g~~R---~dl~~~N~----~i~~~i~~~i~~~~p~ai~ivvtN 119 (143)
T d1llda1 68 RDADMVVITAGPRQKP---GQSR---LELVGATV----NILKAIMPNLVKVAPNAIYMLITN 119 (143)
T ss_dssp TTCSEEEECCCCCCCT---TCCH---HHHHHHHH----HHHHHHHHHHHHHCTTSEEEECCS
T ss_pred hCCcEEEEecccccCC---CCch---hhhhhhhH----HHHHHHHHHHHhhCCCeEEEEeCC
Confidence 3469999999964321 1233 34566666 44555555555543 456666653
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=96.81 E-value=0.003 Score=46.23 Aligned_cols=78 Identities=21% Similarity=0.268 Sum_probs=51.1
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
.|++|+|.|+ |++|...++.+...|+ +|+.+++++++++... +.+.. .++ |-+ .+..+...+. ..+.
T Consensus 32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~----~~ga~-~~i--~~~-~~~~~~~~~~---~~~~ 99 (172)
T d1h2ba2 32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE----RLGAD-HVV--DAR-RDPVKQVMEL---TRGR 99 (172)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH----HTTCS-EEE--ETT-SCHHHHHHHH---TTTC
T ss_pred CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHh----hcccc-eee--cCc-ccHHHHHHHh---hCCC
Confidence 4789999986 9999999998888887 6788888887655443 23333 222 222 2333333322 1224
Q ss_pred CccEEEeCCCC
Q 024752 91 KLNILINNAGT 101 (263)
Q Consensus 91 ~id~li~~ag~ 101 (263)
.+|++|.++|.
T Consensus 100 g~d~vid~~g~ 110 (172)
T d1h2ba2 100 GVNVAMDFVGS 110 (172)
T ss_dssp CEEEEEESSCC
T ss_pred CceEEEEecCc
Confidence 69999999994
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=96.80 E-value=0.0016 Score=47.75 Aligned_cols=80 Identities=21% Similarity=0.292 Sum_probs=51.7
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
+|.+|+|.|+ +|+|...++.+...|+ +|+.+++++++++ ..+++ |..-....-+ ..+.+.+.+... .++
T Consensus 28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~-~ak~l---Ga~~~i~~~~--~~~~~~~~~~~~---~~~ 97 (176)
T d2fzwa2 28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFA-RAKEF---GATECINPQD--FSKPIQEVLIEM---TDG 97 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHH-HHHHH---TCSEEECGGG--CSSCHHHHHHHH---TTS
T ss_pred CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHH-HHHHh---CCcEEEeCCc--hhhHHHHHHHHH---cCC
Confidence 4899999998 5899999999999997 6777888877754 34444 3322211111 122233333332 235
Q ss_pred CccEEEeCCCC
Q 024752 91 KLNILINNAGT 101 (263)
Q Consensus 91 ~id~li~~ag~ 101 (263)
.+|++|.+.|.
T Consensus 98 g~D~vid~~G~ 108 (176)
T d2fzwa2 98 GVDYSFECIGN 108 (176)
T ss_dssp CBSEEEECSCC
T ss_pred CCcEeeecCCC
Confidence 79999999983
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=96.80 E-value=0.012 Score=41.48 Aligned_cols=110 Identities=12% Similarity=0.091 Sum_probs=66.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhc----CCceEEEec-cCCCHHHHHHHHHHHHhh
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSK----GLQVSGSVC-DLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~-D~~~~~~~~~~~~~~~~~ 87 (263)
|++.|.|+ |.+|.++|..|+..+. ++++++.+++..+....++... +.......+ |.. +
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~---~----------- 66 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYA---D----------- 66 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGG---G-----------
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHH---H-----------
Confidence 46677786 9999999999998876 8999999998877666665421 222222111 221 1
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEc
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFIS 149 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vs 149 (263)
. ..-|++|.+||..... .++-.+.+..|. .+++...+.+.+.. .+.++.+|
T Consensus 67 ~-~~advvvitag~~~~~------~~~r~dl~~~N~----~i~~~i~~~i~k~~p~aivivvt 118 (142)
T d1uxja1 67 T-ANSDVIVVTSGAPRKP------GMSREDLIKVNA----DITRACISQAAPLSPNAVIIMVN 118 (142)
T ss_dssp G-TTCSEEEECCSCC---------------CHHHHH----HHHHHHHHHHGGGCTTCEEEECS
T ss_pred h-cCCCEEEEeeeccCCc------CcchhHHHhHHH----HHHHHHHHHHhccCCCceEEEeC
Confidence 1 3579999999975322 122234455554 46667777767643 45555554
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=96.78 E-value=0.013 Score=41.56 Aligned_cols=114 Identities=12% Similarity=0.061 Sum_probs=66.9
Q ss_pred EEEEecCCCchHHHHHHHHHH-CC--CeEEEeeCCchhHHHHHHHHHhcCCceEE-EeccCCCHHHHHHHHHHHHhhcCC
Q 024752 15 TALVTGGTKGIGYAVVEELAA-FG--AIVHTCSRNETELNQRIQEWKSKGLQVSG-SVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~-~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
++.|+|++|.+|.+++..|+. .+ ..+.+++..+ ..+....++......... ....-.+.++ + .
T Consensus 2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~~~~~~~~~----~--------~ 68 (145)
T d2cmda1 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATPA----L--------E 68 (145)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEECSSCCHHH----H--------T
T ss_pred EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEEEcCCCccc----c--------C
Confidence 688999999999999998864 34 4799999865 445555556543222211 1122222221 1 3
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-CCceEEEEccc
Q 024752 91 KLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-GNGNIIFISSV 151 (263)
Q Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~ 151 (263)
.-|++|..||...... .+ -.+.++.|. .+++...+.+.+. +++.++++|..
T Consensus 69 ~aDvvvitaG~~~k~g---~~---R~dl~~~N~----~i~~~v~~~i~~~~p~aivivvtNP 120 (145)
T d2cmda1 69 GADVVLISAGVRRKPG---MD---RSDLFNVNA----GIVKNLVQQVAKTCPKACIGIITNP 120 (145)
T ss_dssp TCSEEEECCSCCCCTT---CC---GGGGHHHHH----HHHHHHHHHHHHHCTTSEEEECSSS
T ss_pred CCCEEEECCCccCCCC---cc---hhhHHHHHH----HHHHHHHHHHHhhCCCcEEEEccCC
Confidence 4699999999753221 12 234456665 4445555555554 35566666653
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.72 E-value=0.0014 Score=48.42 Aligned_cols=51 Identities=20% Similarity=0.148 Sum_probs=43.6
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHh
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS 59 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~ 59 (263)
...+++||.|+|.|+ ||.+++++..|.+.| +|.++.|+.++.+++.+.+..
T Consensus 12 ~~~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~ 62 (177)
T d1nvta1 12 EIGRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAE 62 (177)
T ss_dssp HHCCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHH
T ss_pred hCCCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHH
Confidence 345789999999987 567999999998777 999999999999998887754
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=96.68 E-value=0.007 Score=44.36 Aligned_cols=85 Identities=13% Similarity=0.180 Sum_probs=58.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHH---------------HHhcCCceEEEeccCCCHHHHH
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE---------------WKSKGLQVSGSVCDLKIRAQRE 78 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~---------------~~~~~~~~~~~~~D~~~~~~~~ 78 (263)
+.|-|.|- |-+|.++|++|++.|++|++.+|++++.+++.++ +.+.-.....+...+.+.+.+.
T Consensus 3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~ 81 (176)
T d2pgda2 3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVD 81 (176)
T ss_dssp BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHH
T ss_pred CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHHH
Confidence 45666776 8899999999999999999999999988877543 1111122234445666677788
Q ss_pred HHHHHHHhhcCCCccEEEeCCC
Q 024752 79 KLMETVSSQFDGKLNILINNAG 100 (263)
Q Consensus 79 ~~~~~~~~~~~~~id~li~~ag 100 (263)
++.+.+.... .+=+++|...-
T Consensus 82 ~v~~~l~~~~-~~g~iiid~sT 102 (176)
T d2pgda2 82 NFIEKLVPLL-DIGDIIIDGGN 102 (176)
T ss_dssp HHHHHHHHHC-CTTCEEEECSC
T ss_pred HHHHHHHhcc-ccCcEEEecCc
Confidence 8877777664 33456666554
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=96.67 E-value=0.053 Score=37.97 Aligned_cols=111 Identities=15% Similarity=0.062 Sum_probs=66.8
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchhHHHHHHHHHhc----CCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKSK----GLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
++.|+|+ |.+|.+++..++..|. ++++++++++.++....++... .........+ +.++ +
T Consensus 2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~--~~~~-----------~ 67 (142)
T d1guza1 2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSN--DYAD-----------T 67 (142)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEES--CGGG-----------G
T ss_pred EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecC--CHHH-----------h
Confidence 4677796 9999999999999984 7999999998877665555432 2233332221 1111 1
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-CCceEEEEcc
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-GNGNIIFISS 150 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS 150 (263)
..-|++|..||...... .+. ...++.|.- +++.+.+.+.+. +.+-++++|-
T Consensus 68 -~dadvvvitag~~~~~g---~~r---~~l~~~N~~----i~~~i~~~i~~~~p~aivivvtN 119 (142)
T d1guza1 68 -ANSDIVIITAGLPRKPG---MTR---EDLLMKNAG----IVKEVTDNIMKHSKNPIIIVVSN 119 (142)
T ss_dssp -TTCSEEEECCSCCCCTT---CCH---HHHHHHHHH----HHHHHHHHHHHHCSSCEEEECCS
T ss_pred -cCCeEEEEEEecCCCCC---Cch---HHHHHHHHH----HHHHHHHHhhccCCCeEEEEecC
Confidence 45799999999753321 122 344555554 344444444543 3455555543
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=96.58 E-value=0.0085 Score=43.27 Aligned_cols=80 Identities=14% Similarity=0.085 Sum_probs=52.6
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHH--h--------cCCceEEEeccCCCHHHHHHHHHHH
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWK--S--------KGLQVSGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~--------~~~~~~~~~~D~~~~~~~~~~~~~~ 84 (263)
++.|.|+ |-+|.++|+.|.+.|++|++++|+++..++..+.-. . ...++.++. ...+.++++++++
T Consensus 2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIila---vp~~~~~~vl~~l 77 (165)
T d2f1ka2 2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLC---TPIQLILPTLEKL 77 (165)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEEC---SCHHHHHHHHHHH
T ss_pred EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeeccccccccccccc---CcHhhhhhhhhhh
Confidence 4566665 999999999999999999999999887765543210 0 112233322 2367788888888
Q ss_pred HhhcCCCccEEEeCC
Q 024752 85 SSQFDGKLNILINNA 99 (263)
Q Consensus 85 ~~~~~~~id~li~~a 99 (263)
.... .+=.++++.+
T Consensus 78 ~~~l-~~~~iv~~~~ 91 (165)
T d2f1ka2 78 IPHL-SPTAIVTDVA 91 (165)
T ss_dssp GGGS-CTTCEEEECC
T ss_pred hhhc-ccccceeecc
Confidence 7765 2333444443
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=96.56 E-value=0.034 Score=39.46 Aligned_cols=117 Identities=11% Similarity=0.030 Sum_probs=69.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhc----CCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSK----GLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
.++.|.|+ |.+|.+++..++..+. ++++++++++..+....++... +.+......+. . +..
T Consensus 4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~--~-----------~~~ 69 (150)
T d1t2da1 4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNT--Y-----------DDL 69 (150)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECC--G-----------GGG
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEeccc--c-----------ccc
Confidence 46777785 9999999998888886 7999999998877766665531 23333333221 1 111
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEcc
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISS 150 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS 150 (263)
..-|++|..+|........+.+ .+-...+..|. .+++.+.+.+.+.. .+.++++|-
T Consensus 70 -~~advvvitag~~~~~g~~~~~-~~R~~l~~~N~----~iv~~i~~~i~~~~p~aivivvtN 126 (150)
T d1t2da1 70 -AGADVVIVTAGFTKAPGKSDKE-WNRDDLLPLNN----KIMIEIGGHIKKNCPNAFIIVVTN 126 (150)
T ss_dssp -TTCSEEEECCSCSSCTTCCSTT-CCGGGGHHHHH----HHHHHHHHHHHHHCTTSEEEECSS
T ss_pred -CCCcEEEEecccccCCCCCccc-cchhHHHHHHH----HHHHHHHHHHHhcCCCeEEEEecC
Confidence 4579999999975432111101 11223355554 45555555556543 455666654
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=96.54 E-value=0.0025 Score=46.88 Aligned_cols=42 Identities=21% Similarity=0.095 Sum_probs=36.9
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHH
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQ 55 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~ 55 (263)
.|++.|.|+ |.+|.++|..|++.|++|.+++|+++..+...+
T Consensus 1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~ 42 (184)
T d1bg6a2 1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD 42 (184)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 378899998 889999999999999999999999887766543
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=96.53 E-value=0.012 Score=42.73 Aligned_cols=79 Identities=16% Similarity=0.209 Sum_probs=50.4
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHH-HHHHHHHHHhhcC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQ-REKLMETVSSQFD 89 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~ 89 (263)
+|.+|+|.|+ +++|...+..++..|+ +|+.+++++++++... +.|..-. + |-++++. .++..... .+
T Consensus 28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~----~~GAd~~-i--n~~~~~~~~~~~~~~~---~~ 96 (175)
T d1cdoa2 28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK----VFGATDF-V--NPNDHSEPISQVLSKM---TN 96 (175)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH----HTTCCEE-E--CGGGCSSCHHHHHHHH---HT
T ss_pred CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHH----HcCCcEE-E--cCCCcchhHHHHHHhh---cc
Confidence 4789999986 6788888888888877 6999999988875443 2343322 2 2222111 22222221 13
Q ss_pred CCccEEEeCCCC
Q 024752 90 GKLNILINNAGT 101 (263)
Q Consensus 90 ~~id~li~~ag~ 101 (263)
+.+|+++.+.|.
T Consensus 97 ~G~d~vid~~G~ 108 (175)
T d1cdoa2 97 GGVDFSLECVGN 108 (175)
T ss_dssp SCBSEEEECSCC
T ss_pred CCcceeeeecCC
Confidence 579999999994
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=96.41 E-value=0.0021 Score=47.90 Aligned_cols=44 Identities=23% Similarity=0.182 Sum_probs=37.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHH
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWK 58 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~ 58 (263)
|+|.|.|+ |-+|..+|..|+..|++|++.+++++.+++..+.+.
T Consensus 5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~ 48 (186)
T d1wdka3 5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAA 48 (186)
T ss_dssp SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHH
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhh
Confidence 56888888 789999999999999999999999988876655543
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=96.39 E-value=0.0038 Score=46.99 Aligned_cols=43 Identities=26% Similarity=0.374 Sum_probs=38.3
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHH
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR 53 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~ 53 (263)
+++||+|+|-| .|.+|..+|+.|.+.|++|++.+.+.......
T Consensus 24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~ 66 (201)
T d1c1da1 24 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHA 66 (201)
T ss_dssp CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHH
Confidence 79999999998 67799999999999999999999988766543
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.29 E-value=0.082 Score=36.98 Aligned_cols=110 Identities=9% Similarity=-0.038 Sum_probs=67.8
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchhHHHHHHHHHh----cCCceEEEec-cCCCHHHHHHHHHHHHhh
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWKS----KGLQVSGSVC-DLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~-D~~~~~~~~~~~~~~~~~ 87 (263)
++.|.|+ |.+|.++|..++.+|. .+++++++++..+....+++. .......... |.. +
T Consensus 2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~~---~----------- 66 (142)
T d1ojua1 2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYS---L----------- 66 (142)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGG---G-----------
T ss_pred EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCHH---H-----------
Confidence 5677786 9999999999998885 699999999887766655543 1222222222 321 1
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCC-CceEEEEcc
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAG-NGNIIFISS 150 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS 150 (263)
+ ..-|++|..||...... .+ -.+.+..|. .+.+...+.+.+.. .+.++.+|-
T Consensus 67 ~-~~adiVvitag~~~~~g---~~---r~~l~~~n~----~i~~~i~~~i~~~~p~aivivvtN 119 (142)
T d1ojua1 67 L-KGSEIIVVTAGLARKPG---MT---RLDLAHKNA----GIIKDIAKKIVENAPESKILVVTN 119 (142)
T ss_dssp G-TTCSEEEECCCCCCCSS---CC---HHHHHHHHH----HHHHHHHHHHHTTSTTCEEEECSS
T ss_pred h-ccccEEEEeccccCCCC---Cc---hHHHHHHhh----HHHHHHHHHHHhhCCCcEEEEecC
Confidence 1 45799999999653321 23 234455554 45555556556643 455555554
|
| >d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein PH1948 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.28 E-value=0.046 Score=40.77 Aligned_cols=79 Identities=15% Similarity=0.139 Sum_probs=60.5
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
.-+++|++||=-|++.|. ++..++.+|+ .|++++.++..++...+.+...+.+..++..|+.+
T Consensus 42 ~~dl~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~------------- 105 (201)
T d1wy7a1 42 LGDIEGKVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSE------------- 105 (201)
T ss_dssp TTSSTTCEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGG-------------
T ss_pred cCCCCCCEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHHcCCCceEEECchhh-------------
Confidence 346899999988888772 3334567786 79999999998888877777777778888888642
Q ss_pred hcCCCccEEEeCCCCCC
Q 024752 87 QFDGKLNILINNAGTFI 103 (263)
Q Consensus 87 ~~~~~id~li~~ag~~~ 103 (263)
+.+++|++|.|..+..
T Consensus 106 -~~~~fD~Vi~nPP~~~ 121 (201)
T d1wy7a1 106 -FNSRVDIVIMNPPFGS 121 (201)
T ss_dssp -CCCCCSEEEECCCCSS
T ss_pred -hCCcCcEEEEcCcccc
Confidence 2368999999987653
|
| >d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Putative methyltransferase CAC2371 species: Clostridium acetobutylicum [TaxId: 1488]
Probab=96.27 E-value=0.0063 Score=46.99 Aligned_cols=77 Identities=14% Similarity=0.089 Sum_probs=61.4
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
...++++||=.||+.|. ++..|+++|.+|+.++.+++.++...+.....+.++.++..|+.+.+ +
T Consensus 34 ~~~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~------------~ 98 (246)
T d1y8ca_ 34 NNLVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN------------I 98 (246)
T ss_dssp TTCCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC------------C
T ss_pred hCCCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccCccceeeccchhhhc------------c
Confidence 45678899999999885 78889999999999999999888777767677778899988886431 1
Q ss_pred CCCccEEEeCCC
Q 024752 89 DGKLNILINNAG 100 (263)
Q Consensus 89 ~~~id~li~~ag 100 (263)
.+++|++++..+
T Consensus 99 ~~~fD~i~~~~~ 110 (246)
T d1y8ca_ 99 NRKFDLITCCLD 110 (246)
T ss_dssp SCCEEEEEECTT
T ss_pred cccccccceeee
Confidence 257899987644
|
| >d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Phosphopantothenoylcysteine synthetase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.19 E-value=0.015 Score=46.16 Aligned_cols=36 Identities=31% Similarity=0.235 Sum_probs=29.2
Q ss_pred CCCCE-EEEecCC------------------CchHHHHHHHHHHCCCeEEEeeCC
Q 024752 11 LKGMT-ALVTGGT------------------KGIGYAVVEELAAFGAIVHTCSRN 46 (263)
Q Consensus 11 ~~~k~-vlVtGas------------------~giG~~~a~~l~~~g~~V~~~~r~ 46 (263)
.+||+ ||||.|. |..|.++|+.|..+|+.|+++.+.
T Consensus 15 ~~g~k~VLITaG~T~epID~~pVR~ItN~SSGk~G~alA~~~~~~Ga~V~li~g~ 69 (290)
T d1p9oa_ 15 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRA 69 (290)
T ss_dssp HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred ccCCcEEEEccCCcCcccCCCCceEeCCCCchHHHHHHHHHHHHcCCEEEEEecC
Confidence 45555 7788775 678999999999999999988644
|
| >d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ribosomal protein L11 methyltransferase PrmA domain: PrmA-like protein TTHA0656 (TT0836) species: Thermus thermophilus [TaxId: 274]
Probab=96.17 E-value=0.0063 Score=47.54 Aligned_cols=75 Identities=17% Similarity=0.169 Sum_probs=57.0
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
...+|++||=.|+++|+ ++..+++.|++|+.++.++...+...+..+..+.+..++..|+. ... .
T Consensus 117 ~~~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d~~------~~~----~-- 181 (254)
T d2nxca1 117 HLRPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLE------AAL----P-- 181 (254)
T ss_dssp HCCTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHH------HHG----G--
T ss_pred hcCccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHcCCceeEEecccc------ccc----c--
Confidence 34679999999999986 33456788999999999999998888777777777777777642 111 1
Q ss_pred CCCccEEEeC
Q 024752 89 DGKLNILINN 98 (263)
Q Consensus 89 ~~~id~li~~ 98 (263)
.++.|+++.|
T Consensus 182 ~~~fD~V~an 191 (254)
T d2nxca1 182 FGPFDLLVAN 191 (254)
T ss_dssp GCCEEEEEEE
T ss_pred ccccchhhhc
Confidence 1679999987
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.10 E-value=0.0054 Score=44.74 Aligned_cols=47 Identities=28% Similarity=0.375 Sum_probs=41.5
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQ 52 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~ 52 (263)
+...+++||.++|.|-|.=+|+.++..|+++|++|..+.+....+.+
T Consensus 32 ~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~~ 78 (170)
T d1a4ia1 32 ETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDE 78 (170)
T ss_dssp TTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHH
T ss_pred HhCcccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHHH
Confidence 45678999999999999999999999999999999998887765443
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=96.08 E-value=0.0074 Score=43.70 Aligned_cols=48 Identities=21% Similarity=0.270 Sum_probs=41.1
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR 53 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~ 53 (263)
....+++||.++|.|-|.-+|+.++..|.++|++|..+.+....+.+.
T Consensus 30 ~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~~ 77 (166)
T d1b0aa1 30 RYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHH 77 (166)
T ss_dssp HTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHH
T ss_pred HcCcccccceEEEEeccccccHHHHHHHHHhhccccccccccchhHHH
Confidence 356789999999999999999999999999999999888776554433
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=95.97 E-value=0.015 Score=41.73 Aligned_cols=83 Identities=14% Similarity=0.068 Sum_probs=53.0
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHH-------HhcCCceEEEeccCCCHHHHHHHHH---HHH
Q 024752 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEW-------KSKGLQVSGSVCDLKIRAQREKLME---TVS 85 (263)
Q Consensus 16 vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~~~~D~~~~~~~~~~~~---~~~ 85 (263)
|-|.|. |-+|.++|++|++.|++|++.+|++++.+++.+.- .+.-..+..+..-+.++++++.++. .+.
T Consensus 3 IgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~~ 81 (161)
T d1vpda2 3 VGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGII 81 (161)
T ss_dssp EEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHH
T ss_pred EEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcchh
Confidence 445554 88999999999999999999999998877765321 0000123445556677777777762 233
Q ss_pred hhcCCCccEEEeCCC
Q 024752 86 SQFDGKLNILINNAG 100 (263)
Q Consensus 86 ~~~~~~id~li~~ag 100 (263)
... .+=+++|.+.-
T Consensus 82 ~~~-~~g~iiid~sT 95 (161)
T d1vpda2 82 EGA-KPGTVLIDMSS 95 (161)
T ss_dssp HHC-CTTCEEEECSC
T ss_pred hcc-CCCCEEEECCC
Confidence 332 23345555544
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.95 E-value=0.003 Score=45.18 Aligned_cols=39 Identities=23% Similarity=0.320 Sum_probs=34.4
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCC
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN 46 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~ 46 (263)
--|.++||++||.|| |.+|..-++.|++.|++|.+++..
T Consensus 7 l~~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~ 45 (150)
T d1kyqa1 7 LAHQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD 45 (150)
T ss_dssp EEECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred hheeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 346799999999999 559999999999999999998754
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=95.89 E-value=0.096 Score=37.09 Aligned_cols=114 Identities=14% Similarity=0.181 Sum_probs=62.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-------eEEEeeCCc--hhHHHHHHHHHhcC-CceEEEeccCCCHHHHHHHHHH
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGA-------IVHTCSRNE--TELNQRIQEWKSKG-LQVSGSVCDLKIRAQREKLMET 83 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~-------~V~~~~r~~--~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~ 83 (263)
.+|.|+||+|.+|.+++..|++.+. .+++.+.+. ..++....++.... .....+..- ++. .+.
T Consensus 4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~---~~~--- 76 (154)
T d5mdha1 4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIAT-DKE---EIA--- 76 (154)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEE-SCH---HHH---
T ss_pred eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccC-ccc---ccc---
Confidence 4799999999999999999987542 356665544 33344444433321 112211111 111 111
Q ss_pred HHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhC-CC-ceEEEEc
Q 024752 84 VSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSA-GN-GNIIFIS 149 (263)
Q Consensus 84 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~-~~iv~vs 149 (263)
+ ...|++|..+|...... .+.+ +.++.|. .+++...+.+.+. +. +.++.+|
T Consensus 77 ----~-~~~dvVVitag~~~~~g---~sr~---dll~~N~----~i~k~~~~~i~k~a~~~~~iivvs 129 (154)
T d5mdha1 77 ----F-KDLDVAILVGSMPRRDG---MERK---DLLKANV----KIFKCQGAALDKYAKKSVKVIVVG 129 (154)
T ss_dssp ----T-TTCSEEEECCSCCCCTT---CCTT---TTHHHHH----HHHHHHHHHHHHHSCTTCEEEECS
T ss_pred ----c-CCceEEEEecccCCCCC---Cchh---HHHHHhH----HHHHHHHHHHHhhCCCceEEEEec
Confidence 1 46899999999754322 1222 2344444 5666666666653 33 3455554
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=95.75 E-value=0.0055 Score=44.12 Aligned_cols=36 Identities=22% Similarity=0.192 Sum_probs=32.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhH
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETEL 50 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~ 50 (263)
++|.|.|+ |.+|..++..|++.|++|.+++|++...
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~ 36 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPY 36 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSE
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHh
Confidence 36888988 9999999999999999999999987643
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=95.55 E-value=0.034 Score=37.28 Aligned_cols=76 Identities=13% Similarity=0.150 Sum_probs=56.8
Q ss_pred cccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHH
Q 024752 6 EQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 6 ~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
-.++.....++.|.| +|-+|+-++....+.|++|++.+.+++.-... .--.++..|..|.+.+.++....
T Consensus 4 ~~~~~~~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~--------va~~~i~~~~~d~~~l~~~~~~~- 73 (111)
T d1kjqa2 4 GTALRPAATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAMH--------VAHRSHVINMLDGDALRRVVELE- 73 (111)
T ss_dssp CCTTSTTCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGG--------GSSEEEECCTTCHHHHHHHHHHH-
T ss_pred CCCCCCCCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchhh--------cCCeEEECCCCCHHHHHHHHHhh-
Confidence 345566677899999 67899999999999999999999887532111 01246778999999988887653
Q ss_pred hhcCCCccEEE
Q 024752 86 SQFDGKLNILI 96 (263)
Q Consensus 86 ~~~~~~id~li 96 (263)
.+|++.
T Consensus 74 -----~~DviT 79 (111)
T d1kjqa2 74 -----KPHYIV 79 (111)
T ss_dssp -----CCSEEE
T ss_pred -----CCceEE
Confidence 578774
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=95.53 E-value=0.092 Score=37.58 Aligned_cols=82 Identities=9% Similarity=0.011 Sum_probs=53.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCchhHHHHHHHHH--h----------cCCceEEEeccCCCHHHHHH
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNETELNQRIQEWK--S----------KGLQVSGSVCDLKIRAQREK 79 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~--~----------~~~~~~~~~~D~~~~~~~~~ 79 (263)
|+++|.|+ |-||.++|+.|.+.|. +|+.++|+++..+...+.-. . ....+..+ .+.++++.+
T Consensus 2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIil---a~p~~~~~~ 77 (171)
T d2g5ca2 2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVML---SSPVRTFRE 77 (171)
T ss_dssp CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEE---CSCHHHHHH
T ss_pred CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccc---cCCchhhhh
Confidence 46888875 8999999999999996 78999999887776554310 0 01111111 223667888
Q ss_pred HHHHHHhhcCCCccEEEeCCC
Q 024752 80 LMETVSSQFDGKLNILINNAG 100 (263)
Q Consensus 80 ~~~~~~~~~~~~id~li~~ag 100 (263)
+++++.... .+=.+++..++
T Consensus 78 vl~~l~~~~-~~~~ii~d~~s 97 (171)
T d2g5ca2 78 IAKKLSYIL-SEDATVTDQGS 97 (171)
T ss_dssp HHHHHHHHS-CTTCEEEECCS
T ss_pred hhhhhhccc-ccccccccccc
Confidence 888887765 33344444444
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=95.44 E-value=0.064 Score=39.00 Aligned_cols=78 Identities=17% Similarity=0.120 Sum_probs=54.6
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc-------------CCceEEEeccCCCHHHH
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK-------------GLQVSGSVCDLKIRAQR 77 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~ 77 (263)
.+|++||..||+.| ..+..|+++|++|+.++.++..++...+..+.. +....++..|..+....
T Consensus 19 ~~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 95 (201)
T d1pjza_ 19 VPGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR 95 (201)
T ss_dssp CTTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred CCCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccccc
Confidence 35889999999988 477789999999999999999888776665432 23345666776653221
Q ss_pred HHHHHHHHhhcCCCccEEEeCCCC
Q 024752 78 EKLMETVSSQFDGKLNILINNAGT 101 (263)
Q Consensus 78 ~~~~~~~~~~~~~~id~li~~ag~ 101 (263)
.. ...|.++.....
T Consensus 96 ~~----------~~~D~i~~~~~l 109 (201)
T d1pjza_ 96 DI----------GHCAAFYDRAAM 109 (201)
T ss_dssp HH----------HSEEEEEEESCG
T ss_pred cc----------cceeEEEEEeee
Confidence 11 356877665443
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.36 E-value=0.017 Score=41.64 Aligned_cols=45 Identities=24% Similarity=0.327 Sum_probs=39.1
Q ss_pred ccccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhH
Q 024752 5 REQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETEL 50 (263)
Q Consensus 5 ~~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~ 50 (263)
|.....+.||+++|.|-. -+|+.+|+.|...|++|+++..++.+.
T Consensus 16 r~t~~~l~Gk~v~V~GyG-~iG~g~A~~~rg~G~~V~v~e~dp~~a 60 (163)
T d1li4a1 16 RATDVMIAGKVAVVAGYG-DVGKGCAQALRGFGARVIITEIDPINA 60 (163)
T ss_dssp HHHCCCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred HHhCceecCCEEEEeccc-cccHHHHHHHHhCCCeeEeeecccchh
Confidence 455677999999999865 799999999999999999999998553
|
| >d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical methyltransferase PH1305 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=95.29 E-value=0.048 Score=41.65 Aligned_cols=75 Identities=19% Similarity=0.057 Sum_probs=58.7
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
-+++++|=.||+.| .++..|++.|++|++++.++.-++...+.....+.++.++..|+.+.. +.+
T Consensus 40 ~~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~------------~~~ 104 (251)
T d1wzna1 40 REVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIA------------FKN 104 (251)
T ss_dssp SCCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCC------------CCS
T ss_pred CCCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccccccchheehhhhhcc------------ccc
Confidence 45678999999987 456778999999999999998888777777776778889999986532 125
Q ss_pred CccEEEeCCC
Q 024752 91 KLNILINNAG 100 (263)
Q Consensus 91 ~id~li~~ag 100 (263)
+.|.+++.-+
T Consensus 105 ~fD~I~~~~~ 114 (251)
T d1wzna1 105 EFDAVTMFFS 114 (251)
T ss_dssp CEEEEEECSS
T ss_pred ccchHhhhhh
Confidence 7899887643
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=95.20 E-value=0.058 Score=37.67 Aligned_cols=86 Identities=10% Similarity=-0.026 Sum_probs=55.1
Q ss_pred CCCEEEEecCC---CchHHHHHHHHHHCCCeEEEeeCCchhHH--HHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 12 KGMTALVTGGT---KGIGYAVVEELAAFGAIVHTCSRNETELN--QRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 12 ~~k~vlVtGas---~giG~~~a~~l~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
+-|.+.|.|+| +..|..+++.|.+.|++|+.+....+... .....+.+....+.. ..=+...+.+..+++++.+
T Consensus 18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~~iD~-v~i~vp~~~~~~~~~e~~~ 96 (139)
T d2d59a1 18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEV-VDLFVKPKLTMEYVEQAIK 96 (139)
T ss_dssp HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSE-EEECSCHHHHHHHHHHHHH
T ss_pred cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccCccceE-EEEEeCHHHHHHHHHHHHH
Confidence 46899999999 57999999999999999998876543221 111112221111111 1112457777888888776
Q ss_pred hcCCCccEEEeCCCC
Q 024752 87 QFDGKLNILINNAGT 101 (263)
Q Consensus 87 ~~~~~id~li~~ag~ 101 (263)
. .+..++...|.
T Consensus 97 ~---g~k~v~~~~G~ 108 (139)
T d2d59a1 97 K---GAKVVWFQYNT 108 (139)
T ss_dssp H---TCSEEEECTTC
T ss_pred h---CCCEEEEeccc
Confidence 5 35677777774
|
| >d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein Ta1320 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=95.16 E-value=0.056 Score=40.14 Aligned_cols=73 Identities=19% Similarity=0.169 Sum_probs=53.4
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
=+++||+||=.|+++|+ ++..++..|+ +|+.++.+++..+...+. -.++.++.+|+.+
T Consensus 45 ~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N----~~~~~~~~~D~~~-------------- 103 (197)
T d1ne2a_ 45 GNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRN----CGGVNFMVADVSE-------------- 103 (197)
T ss_dssp TSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHH----CTTSEEEECCGGG--------------
T ss_pred CCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHc----cccccEEEEehhh--------------
Confidence 36899999999999883 3445677886 699999998776644432 3457788888753
Q ss_pred cCCCccEEEeCCCCC
Q 024752 88 FDGKLNILINNAGTF 102 (263)
Q Consensus 88 ~~~~id~li~~ag~~ 102 (263)
..+++|++|.|..+.
T Consensus 104 l~~~fD~Vi~NPPfg 118 (197)
T d1ne2a_ 104 ISGKYDTWIMNPPFG 118 (197)
T ss_dssp CCCCEEEEEECCCC-
T ss_pred cCCcceEEEeCcccc
Confidence 236899999997753
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.16 E-value=0.094 Score=37.40 Aligned_cols=85 Identities=8% Similarity=0.075 Sum_probs=53.4
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHH-------hcCCceEEEeccCCCHHHHHHHHHH---H
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWK-------SKGLQVSGSVCDLKIRAQREKLMET---V 84 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~~~~~D~~~~~~~~~~~~~---~ 84 (263)
+|-+. |.|-+|.++|++|++.|+.|.+.+|++++.+.+.+.-. +.-..+..+..-+.+..+++.++.. +
T Consensus 3 kIg~I-GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~~ 81 (162)
T d3cuma2 3 QIAFI-GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 81 (162)
T ss_dssp EEEEE-CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTCH
T ss_pred EEEEE-EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhccccc
Confidence 35555 45889999999999999999999999988776543211 1112234555566667777766543 2
Q ss_pred HhhcCCCccEEEeCCCC
Q 024752 85 SSQFDGKLNILINNAGT 101 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~ 101 (263)
.... .+=+++|.+.-.
T Consensus 82 ~~~l-~~g~iiid~st~ 97 (162)
T d3cuma2 82 LAHI-APGTLVLECSTI 97 (162)
T ss_dssp HHHS-CTTCEEEECSCC
T ss_pred cccC-CCCCEEEECCCC
Confidence 3332 222455555543
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.15 E-value=0.015 Score=42.28 Aligned_cols=40 Identities=25% Similarity=0.246 Sum_probs=36.2
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE 47 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~ 47 (263)
..+++||.++|.|-|.=+|+.++..|+++|++|..+.++.
T Consensus 24 g~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~ 63 (171)
T d1edza1 24 GNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNN 63 (171)
T ss_dssp TCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSE
T ss_pred cCCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEecccc
Confidence 3489999999999999999999999999999999887653
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=95.12 E-value=0.1 Score=37.74 Aligned_cols=36 Identities=17% Similarity=0.194 Sum_probs=32.6
Q ss_pred CCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHH
Q 024752 21 GTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE 56 (263)
Q Consensus 21 as~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~ 56 (263)
|.|-+|.+++++|++.|++|.+.+|++++.+++.++
T Consensus 8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~ 43 (178)
T d1pgja2 8 GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKA 43 (178)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc
Confidence 567889999999999999999999999998887765
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=95.03 E-value=0.016 Score=39.99 Aligned_cols=71 Identities=15% Similarity=0.068 Sum_probs=50.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
|.++|.|. +.+|+.+++.|. |..|++++.+++..+... .. .+.++..|.++++.++++- -.+-+
T Consensus 1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~----~~--~~~~i~Gd~~~~~~L~~a~-------i~~A~ 64 (129)
T d2fy8a1 1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKVL----RS--GANFVHGDPTRVSDLEKAN-------VRGAR 64 (129)
T ss_dssp CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHHH----HT--TCEEEESCTTSHHHHHHTT-------CTTCS
T ss_pred CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHHH----hc--CccccccccCCHHHHHHhh-------hhcCc
Confidence 56788875 678999999994 556788888888765543 22 3577889999988777642 14677
Q ss_pred EEEeCCC
Q 024752 94 ILINNAG 100 (263)
Q Consensus 94 ~li~~ag 100 (263)
.+|....
T Consensus 65 ~vi~~~~ 71 (129)
T d2fy8a1 65 AVIVNLE 71 (129)
T ss_dssp EEEECCS
T ss_pred EEEEecc
Confidence 7776543
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=95.01 E-value=0.038 Score=42.54 Aligned_cols=36 Identities=28% Similarity=0.374 Sum_probs=31.9
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCc
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNE 47 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~ 47 (263)
+++++|+|.| .||+|..++..|+..|. ++.++|.+.
T Consensus 28 L~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~ 64 (247)
T d1jw9b_ 28 LKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDT 64 (247)
T ss_dssp HHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred HhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcc
Confidence 7789999999 67899999999999999 788888753
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=94.92 E-value=0.12 Score=37.12 Aligned_cols=81 Identities=19% Similarity=0.153 Sum_probs=58.2
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
.+.-+|+|.|+. -.|++-++.....|+.|.++|.+.+.++++...... ++. .-.++++.+.+.+.
T Consensus 30 v~pa~V~ViGaG-vaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~---~~~---~~~~~~~~l~~~~~-------- 94 (168)
T d1pjca1 30 VKPGKVVILGGG-VVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS---RVE---LLYSNSAEIETAVA-------- 94 (168)
T ss_dssp BCCCEEEEECCS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---GSE---EEECCHHHHHHHHH--------
T ss_pred CCCcEEEEECCC-hHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcc---cce---eehhhhhhHHHhhc--------
Confidence 455678888875 459999999999999999999999988777655432 222 23455666655543
Q ss_pred CccEEEeCCCCCCCCC
Q 024752 91 KLNILINNAGTFIPKE 106 (263)
Q Consensus 91 ~id~li~~ag~~~~~~ 106 (263)
.-|++|..+-+...+.
T Consensus 95 ~aDivI~aalipG~~a 110 (168)
T d1pjca1 95 EADLLIGAVLVPGRRA 110 (168)
T ss_dssp TCSEEEECCCCTTSSC
T ss_pred cCcEEEEeeecCCccc
Confidence 5699999998765543
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=94.86 E-value=0.027 Score=38.84 Aligned_cols=73 Identities=11% Similarity=0.118 Sum_probs=54.2
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEE-eeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCcc
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGAIVHT-CSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLN 93 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 93 (263)
++.|.|++|-+|+.+++.+.+.|+.++. ++++.... + ...+ +..|+|.++...+.++.+.+. ++-
T Consensus 2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~~------~--~~~D---VvIDFS~p~~~~~~l~~~~~~---~~p 67 (128)
T d1vm6a3 2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVEE------L--DSPD---VVIDFSSPEALPKTVDLCKKY---RAG 67 (128)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEEE------C--SCCS---EEEECSCGGGHHHHHHHHHHH---TCE
T ss_pred EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHHH------h--ccCC---EEEEecCHHHHHHHHHHHHhc---CCC
Confidence 5899999999999999999999998654 45543210 0 1122 356999999999999988875 356
Q ss_pred EEEeCCCC
Q 024752 94 ILINNAGT 101 (263)
Q Consensus 94 ~li~~ag~ 101 (263)
+|+-..|.
T Consensus 68 ~ViGTTG~ 75 (128)
T d1vm6a3 68 LVLGTTAL 75 (128)
T ss_dssp EEECCCSC
T ss_pred EEEEcCCC
Confidence 77777774
|
| >d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermotoga maritima [TaxId: 2336]
Probab=94.86 E-value=0.038 Score=40.98 Aligned_cols=77 Identities=18% Similarity=0.099 Sum_probs=59.1
Q ss_pred EecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCccEEEe
Q 024752 18 VTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILIN 97 (263)
Q Consensus 18 VtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~li~ 97 (263)
+|.|+||.-.++.+.+ .+.+|++++++++.++...+.+...+.++.++..++++... .+... ...++|.++.
T Consensus 30 ~t~G~Gghs~~il~~~--~~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~---~~~~~---~~~~vdgIl~ 101 (192)
T d1m6ya2 30 CTVGEGGHSRAILEHC--PGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADF---LLKTL---GIEKVDGILM 101 (192)
T ss_dssp TTCTTSHHHHHHHHHC--TTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHH---HHHHT---TCSCEEEEEE
T ss_pred ecCCCcHHHHHHHhcC--CCCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHH---HHHHc---CCCCcceeee
Confidence 6888888888888876 35689999999999988887777767789999998876433 22221 1258999999
Q ss_pred CCCCC
Q 024752 98 NAGTF 102 (263)
Q Consensus 98 ~ag~~ 102 (263)
..|++
T Consensus 102 DlGvS 106 (192)
T d1m6ya2 102 DLGVS 106 (192)
T ss_dssp ECSCC
T ss_pred ccchh
Confidence 99975
|
| >d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein TTHA1280, middle and C-terminal domains species: Thermus thermophilus [TaxId: 274]
Probab=94.75 E-value=0.35 Score=38.41 Aligned_cols=84 Identities=18% Similarity=0.242 Sum_probs=57.6
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCC-ceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL-QVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
.+|++||=.++..| |.++ .++..+.+|+.++.++..++...+.....+. ++.++..|.. ++.+...+. +
T Consensus 144 ~~g~rVLDl~~gtG-~~s~--~~a~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~------~~~~~~~~~-~ 213 (318)
T d1wxxa2 144 FRGERALDVFSYAG-GFAL--HLALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAF------DLLRRLEKE-G 213 (318)
T ss_dssp CCEEEEEEETCTTT-HHHH--HHHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHH------HHHHHHHHT-T
T ss_pred hCCCeeeccCCCCc-HHHH--HHHhcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHH------HHhhhhHhh-h
Confidence 57899986666654 3333 2445567899999999999888877776653 5778888864 333333333 2
Q ss_pred CCccEEEeCCCCCCC
Q 024752 90 GKLNILINNAGTFIP 104 (263)
Q Consensus 90 ~~id~li~~ag~~~~ 104 (263)
.++|.|+.+......
T Consensus 214 ~~fD~Vi~DpP~~~~ 228 (318)
T d1wxxa2 214 ERFDLVVLDPPAFAK 228 (318)
T ss_dssp CCEEEEEECCCCSCC
T ss_pred cCCCEEEEcCCcccc
Confidence 679999999765443
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=94.71 E-value=0.062 Score=38.01 Aligned_cols=36 Identities=22% Similarity=0.209 Sum_probs=29.5
Q ss_pred CCEEEE-ecCCCchHHHHHHHHHHCCCeEEEeeCCch
Q 024752 13 GMTALV-TGGTKGIGYAVVEELAAFGAIVHTCSRNET 48 (263)
Q Consensus 13 ~k~vlV-tGas~giG~~~a~~l~~~g~~V~~~~r~~~ 48 (263)
++.++| -.+++.||.++|..|+++|++|.++.+.+.
T Consensus 39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~ 75 (156)
T d1djqa2 39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL 75 (156)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence 444444 456789999999999999999999998764
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=94.53 E-value=0.035 Score=39.33 Aligned_cols=41 Identities=20% Similarity=0.233 Sum_probs=34.1
Q ss_pred EEEEecCCCchHHHHHHHHHHCC-CeEEEeeCCchhHHHHHHH
Q 024752 15 TALVTGGTKGIGYAVVEELAAFG-AIVHTCSRNETELNQRIQE 56 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g-~~V~~~~r~~~~~~~~~~~ 56 (263)
++.+.|+ |-+|.++++.|.+.| ++|++.+|++++.+++.++
T Consensus 2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~ 43 (152)
T d1yqga2 2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE 43 (152)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH
T ss_pred EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhh
Confidence 3556666 899999999999887 7999999999888777654
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=94.50 E-value=0.24 Score=34.11 Aligned_cols=76 Identities=13% Similarity=0.134 Sum_probs=52.8
Q ss_pred EEEEecCCCchHHHHHHHHHHC-CCeEE-EeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 15 TALVTGGTKGIGYAVVEELAAF-GAIVH-TCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~-g~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
++.|.|++|-+|+.+++...+. ++.++ .+++.... . .+...+.+ +..|+|.++.....++.+.+. ++
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~-~----~~~~~~~D---vvIDFS~p~~~~~~~~~~~~~---~~ 69 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPL-S----LLTDGNTE---VVIDFTHPDVVMGNLEFLIDN---GI 69 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCT-H----HHHTTTCS---EEEECCCTTTHHHHHHHHHHT---TC
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCch-h----hhccccCC---EEEEcccHHHHHHHHHHHHhc---CC
Confidence 5889999999999999987664 56644 45554321 1 12222333 346999999999999988874 45
Q ss_pred cEEEeCCCC
Q 024752 93 NILINNAGT 101 (263)
Q Consensus 93 d~li~~ag~ 101 (263)
-+|+-..|.
T Consensus 70 ~~ViGTTG~ 78 (135)
T d1yl7a1 70 HAVVGTTGF 78 (135)
T ss_dssp EEEECCCCC
T ss_pred CEEEecccc
Confidence 677766664
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.47 E-value=0.019 Score=48.11 Aligned_cols=36 Identities=28% Similarity=0.468 Sum_probs=31.2
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCc
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNE 47 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~ 47 (263)
+++.+|||.|+ ||+|..+++.|+..|. ++.++|.+.
T Consensus 35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~ 71 (426)
T d1yovb1 35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDT 71 (426)
T ss_dssp HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCB
T ss_pred HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 45678999998 6799999999999999 688888754
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=94.45 E-value=0.1 Score=38.51 Aligned_cols=89 Identities=19% Similarity=0.164 Sum_probs=55.0
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHH---------HHHHHhcCCceEEEeccCCCHHHHH
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQR---------IQEWKSKGLQVSGSVCDLKIRAQRE 78 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~---------~~~~~~~~~~~~~~~~D~~~~~~~~ 78 (263)
..+++||++.|.| -|.||+.+++.+...|++|+..++........ .+++-. ..++..+.+.+++...
T Consensus 44 ~~eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~l~~ll~-~sD~i~~~~plt~~T~-- 119 (193)
T d1mx3a1 44 AARIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLF-HSDCVTLHCGLNEHNH-- 119 (193)
T ss_dssp CCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEECSSHHHHHH-HCSEEEECCCCCTTCT--
T ss_pred ceeeeCceEEEec-cccccccceeeeeccccceeeccCcccccchhhhccccccchhhccc-cCCEEEEeecccccch--
Confidence 4568999999996 57899999999999999999999864332111 111111 2356666777665322
Q ss_pred HHHH-HHHhhcCCCccEEEeCCCCC
Q 024752 79 KLME-TVSSQFDGKLNILINNAGTF 102 (263)
Q Consensus 79 ~~~~-~~~~~~~~~id~li~~ag~~ 102 (263)
.++. +..+. -+.+.++-|.+.+
T Consensus 120 ~li~~~~l~~--mk~~a~lIN~sRG 142 (193)
T d1mx3a1 120 HLINDFTVKQ--MRQGAFLVNTARG 142 (193)
T ss_dssp TSBSHHHHTT--SCTTEEEEECSCT
T ss_pred hhhhHHHHhc--cCCCCeEEecCCc
Confidence 1111 11111 3567777777654
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=94.41 E-value=0.051 Score=41.40 Aligned_cols=48 Identities=23% Similarity=0.294 Sum_probs=41.3
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHH
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQE 56 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~ 56 (263)
.-+++||+++|-|- |.+|..+|+.|.+.|++|+..+.+....+....+
T Consensus 34 ~~~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~ 81 (230)
T d1leha1 34 SDSLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE 81 (230)
T ss_dssp SCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHh
Confidence 45799999999985 6789999999999999999999998877766554
|
| >d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein PH1915, middle and C-terminal domains species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=94.35 E-value=0.49 Score=37.62 Aligned_cols=115 Identities=18% Similarity=0.232 Sum_probs=71.0
Q ss_pred CCCEEEEecCCCc-hHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcCC--ceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 12 KGMTALVTGGTKG-IGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKGL--QVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 12 ~~k~vlVtGas~g-iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
+|++||=.++..| ++.+ ++..|+ .|+.++.++..++...+.+...+. ++.++..|+. +.+..+...
T Consensus 145 ~g~~VLDl~~g~G~~si~----~a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~------~~~~~~~~~ 214 (324)
T d2as0a2 145 PGDRVLDVFTYTGGFAIH----AAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAF------EEMEKLQKK 214 (324)
T ss_dssp TTCEEEETTCTTTHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH------HHHHHHHHT
T ss_pred CCCeeecccCcccchhhh----hhhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhh------hhhHHHHhc
Confidence 4888887777654 3433 456677 799999999998888777766543 5777777753 333444333
Q ss_pred cCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEc
Q 024752 88 FDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFIS 149 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vs 149 (263)
+.++|++|.+........ .+.... ......+++.+.+.++. +|.+++.+
T Consensus 215 -~~~fD~Vi~DpP~~~~~~------~~~~~~----~~~y~~l~~~a~~ll~p--GG~lv~~s 263 (324)
T d2as0a2 215 -GEKFDIVVLDPPAFVQHE------KDLKAG----LRAYFNVNFAGLNLVKD--GGILVTCS 263 (324)
T ss_dssp -TCCEEEEEECCCCSCSSG------GGHHHH----HHHHHHHHHHHHTTEEE--EEEEEEEE
T ss_pred -cCCCCchhcCCccccCCH------HHHHHH----HHHHHHHHHHHHHHcCC--CcEEEEEe
Confidence 268999999877543321 111211 11234466666666544 56666554
|
| >d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein SMu776, middle and C-terminal domains species: Streptococcus mutans [TaxId: 1309]
Probab=94.31 E-value=0.93 Score=35.82 Aligned_cols=153 Identities=16% Similarity=0.139 Sum_probs=85.5
Q ss_pred CCCCEEEEecCCC-chHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcC---CceEEEeccCCCHHHHHHHHHHHH
Q 024752 11 LKGMTALVTGGTK-GIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKG---LQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 11 ~~~k~vlVtGas~-giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
-+|++||=..+.. +++. ..+..|+ .|+.++.++..++...+.++.++ .++.++..|+ .+.++...
T Consensus 143 ~~g~~VLdlf~~~G~~sl----~aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~------~~~l~~~~ 212 (317)
T d2b78a2 143 AAGKTVLNLFSYTAAFSV----AAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDV------FDYFKYAR 212 (317)
T ss_dssp TBTCEEEEETCTTTHHHH----HHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCH------HHHHHHHH
T ss_pred hCCCceeecCCCCcHHHH----HHHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccH------HHHHHHHH
Confidence 3588888665554 4443 3455788 69999999998888777776543 3577888885 34455555
Q ss_pred hhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhh
Q 024752 86 SQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYAS 165 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~ 165 (263)
++. .++|++|..........-.-.+. ......+++.+++.++. +|.++ ++|......
T Consensus 213 ~~~-~~fD~Ii~DPP~f~~~~~~~~~~----------~~~~~~L~~~a~~ll~p--gG~l~-~~scs~~~~--------- 269 (317)
T d2b78a2 213 RHH-LTYDIIIIDPPSFARNKKEVFSV----------SKDYHKLIRQGLEILSE--NGLII-ASTNAANMT--------- 269 (317)
T ss_dssp HTT-CCEEEEEECCCCC-----CCCCH----------HHHHHHHHHHHHHTEEE--EEEEE-EEECCTTSC---------
T ss_pred hhc-CCCCEEEEcChhhccchhHHHHH----------HHHHHHHHHHHHHHcCC--CCEEE-EEeCCccCC---------
Confidence 543 68999999976443221111111 11223456666666655 34444 555332211
Q ss_pred HHHHHHHHHHHHHHHHccCCcEEEEEecCcccCCc
Q 024752 166 SKVAMNQLTKNLACEWAKDKIRVNTVAPWVIRTPL 200 (263)
Q Consensus 166 sK~a~~~~~~~~a~e~~~~gi~v~~v~PG~v~t~~ 200 (263)
.+.|.+.+...+...+.++..+..-+.+.|.
T Consensus 270 ----~~~f~~~v~~a~~~~~~~~~~~~~~~~DfP~ 300 (317)
T d2b78a2 270 ----VSQFKKQIEKGFGKQKHTYLDLQQLPSDFAV 300 (317)
T ss_dssp ----HHHHHHHHHHHHTTCCCEEEEEECCCTTSCC
T ss_pred ----HHHHHHHHHHHHHHcCCeEEEeccCCCCCCC
Confidence 1223333344455567777666533344443
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=93.99 E-value=0.19 Score=33.45 Aligned_cols=35 Identities=26% Similarity=0.302 Sum_probs=30.2
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCch
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET 48 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~ 48 (263)
.|.++|.|| |.+|..+|..|++.|.+|.++.|.+.
T Consensus 22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~ 56 (117)
T d1ebda2 22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE 56 (117)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence 478888875 68999999999999999999988764
|
| >d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=93.88 E-value=0.18 Score=37.75 Aligned_cols=78 Identities=21% Similarity=0.205 Sum_probs=60.1
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcC-CceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG-LQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
+|.+||..|+++|--.++.-+++ |.+|+.+.++++-.+...+.+...+ .++.++..|..+. . .. .+
T Consensus 78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g---------~-~~-~~ 144 (215)
T d1jg1a_ 78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKG---------F-PP-KA 144 (215)
T ss_dssp TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC---------C-GG-GC
T ss_pred ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccC---------C-cc-cC
Confidence 47899999999999888888777 4679999999887777777777655 5688888987531 0 11 16
Q ss_pred CccEEEeCCCCC
Q 024752 91 KLNILINNAGTF 102 (263)
Q Consensus 91 ~id~li~~ag~~ 102 (263)
+.|.++.+++..
T Consensus 145 pfD~Iiv~~a~~ 156 (215)
T d1jg1a_ 145 PYDVIIVTAGAP 156 (215)
T ss_dssp CEEEEEECSBBS
T ss_pred cceeEEeecccc
Confidence 899999988874
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=93.79 E-value=0.16 Score=34.40 Aligned_cols=37 Identities=22% Similarity=0.195 Sum_probs=31.3
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE 47 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~ 47 (263)
+.++|+++|.| +|.+|..+|..|+++|.+|.++.+.+
T Consensus 27 ~~~~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~ 63 (123)
T d1nhpa2 27 DPEVNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILD 63 (123)
T ss_dssp CTTCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred ccCCCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecC
Confidence 34678888885 56899999999999999999998865
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=93.73 E-value=0.027 Score=41.65 Aligned_cols=41 Identities=24% Similarity=0.152 Sum_probs=33.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHH
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQ 55 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~ 55 (263)
+++.|.|++. .|.++|..|++.|++|.+.+|+++..+++..
T Consensus 8 ~KI~ViGaG~-wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~ 48 (189)
T d1n1ea2 8 NKAVVFGSGA-FGTALAMVLSKKCREVCVWHMNEEEVRLVNE 48 (189)
T ss_dssp EEEEEECCSH-HHHHHHHHHHTTEEEEEEECSCHHHHHHHHH
T ss_pred ceEEEECCCH-HHHHHHHHHHHcCCeEEEEEecHHHHHHHhh
Confidence 4677888755 6999999999999999999999877665543
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=93.72 E-value=0.18 Score=33.98 Aligned_cols=36 Identities=19% Similarity=0.250 Sum_probs=30.6
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCch
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET 48 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~ 48 (263)
++|+++|.|| |.+|.++|..|+++|.+|.++.+.+.
T Consensus 29 ~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~ 64 (121)
T d1d7ya2 29 PQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR 64 (121)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred cCCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence 3578877765 78999999999999999999998764
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=93.67 E-value=0.048 Score=38.63 Aligned_cols=41 Identities=7% Similarity=0.047 Sum_probs=34.0
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHH
Q 024752 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEW 57 (263)
Q Consensus 16 vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~ 57 (263)
+.+. |.|-+|.++++.|.+.|+++++.+|+.++.+++.++.
T Consensus 3 Ig~I-G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~ 43 (152)
T d2ahra2 3 IGII-GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL 43 (152)
T ss_dssp EEEE-CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred EEEE-eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence 3344 6788999999999999999999999998887776554
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=93.61 E-value=0.4 Score=34.88 Aligned_cols=39 Identities=15% Similarity=0.143 Sum_probs=34.2
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE 47 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~ 47 (263)
..+++++++.|.| .|.||+.+++.+...|.+|+..++..
T Consensus 39 ~~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~ 77 (188)
T d1sc6a1 39 SFEARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIEN 77 (188)
T ss_dssp CCCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred cccccceEEEEee-cccchhhhhhhcccccceEeeccccc
Confidence 4568999999994 68899999999999999999999864
|
| >d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.57 E-value=0.24 Score=37.13 Aligned_cols=43 Identities=16% Similarity=0.109 Sum_probs=36.8
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHH
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEW 57 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~ 57 (263)
++++||..||+.| ..+..|+++|++|+.++-++..++...++.
T Consensus 45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~ 87 (229)
T d2bzga1 45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQ 87 (229)
T ss_dssp CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHT
T ss_pred CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHh
Confidence 6789999999987 468888999999999999999887766653
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=93.41 E-value=0.032 Score=43.29 Aligned_cols=34 Identities=21% Similarity=0.201 Sum_probs=29.7
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE 47 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~ 47 (263)
+|+|+|.||.-+ |...|..|+++|++|.++.++.
T Consensus 1 ~KkV~IIGaG~a-GL~aA~~La~~G~~V~vlE~~~ 34 (373)
T d1seza1 1 AKRVAVIGAGVS-GLAAAYKLKIHGLNVTVFEAEG 34 (373)
T ss_dssp CCEEEEECCSHH-HHHHHHHHHTTSCEEEEECSSS
T ss_pred CCEEEEECcCHH-HHHHHHHHHhCCCCEEEEeCCC
Confidence 688999987655 9999999999999999998754
|
| >d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Putative methyltransferase Atu0340 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=93.38 E-value=1.2 Score=35.06 Aligned_cols=82 Identities=15% Similarity=0.131 Sum_probs=55.2
Q ss_pred CCCEEEEecCCC-chHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcC---CceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 12 KGMTALVTGGTK-GIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG---LQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 12 ~~k~vlVtGas~-giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
++++||=..+.. +++.+ +++.|+.|+.++.+...++...+....++ .++.++..|+ .+.+++..+.
T Consensus 132 ~~~rVLdlf~~tG~~sl~----aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~------~~~l~~~~~~ 201 (309)
T d2igta1 132 RPLKVLNLFGYTGVASLV----AAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDA------MKFIQREERR 201 (309)
T ss_dssp SCCEEEEETCTTCHHHHH----HHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCH------HHHHHHHHHH
T ss_pred CCCeEEEecCCCcHHHHH----HHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCH------HHhHHHHhhc
Confidence 577888555544 44443 45689999999999998887776655332 3578888775 3445544444
Q ss_pred cCCCccEEEeCCCCCCC
Q 024752 88 FDGKLNILINNAGTFIP 104 (263)
Q Consensus 88 ~~~~id~li~~ag~~~~ 104 (263)
+.+.|+||.+......
T Consensus 202 -~~~fD~IilDPP~f~~ 217 (309)
T d2igta1 202 -GSTYDIILTDPPKFGR 217 (309)
T ss_dssp -TCCBSEEEECCCSEEE
T ss_pred -CCCCCEEEECCCcccc
Confidence 2689999998765433
|
| >d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Precorrin-6Y methyltransferase (CbiT) domain: Precorrin-6Y methyltransferase (CbiT) species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=93.26 E-value=0.47 Score=34.24 Aligned_cols=75 Identities=20% Similarity=0.184 Sum_probs=54.9
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcC--CceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG--LQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
+|.+||=.|+++| .++..|++.+.+|+.++.+++.++...+.++..+ .++.++.+|.. ... ...
T Consensus 33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~------~~~----~~~- 98 (186)
T d1l3ia_ 33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAP------EAL----CKI- 98 (186)
T ss_dssp TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHH------HHH----TTS-
T ss_pred CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchh------hcc----ccc-
Confidence 4788887888877 3345567778899999999999998888887765 47888888842 111 122
Q ss_pred CCccEEEeCCC
Q 024752 90 GKLNILINNAG 100 (263)
Q Consensus 90 ~~id~li~~ag 100 (263)
..+|.++.+.+
T Consensus 99 ~~~D~v~~~~~ 109 (186)
T d1l3ia_ 99 PDIDIAVVGGS 109 (186)
T ss_dssp CCEEEEEESCC
T ss_pred CCcCEEEEeCc
Confidence 57999998754
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.24 E-value=0.22 Score=33.64 Aligned_cols=34 Identities=18% Similarity=0.235 Sum_probs=29.9
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE 47 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~ 47 (263)
.|+++|.||+ .||..+|..|++.|.+|.++.|.+
T Consensus 22 pk~vvIvGgG-~iG~E~A~~l~~~G~~Vtlv~~~~ 55 (125)
T d3grsa2 22 PGRSVIVGAG-YIAVEMAGILSALGSKTSLMIRHD 55 (125)
T ss_dssp CSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCEEEEEcCC-ccHHHHHHHHhcCCcEEEEEeecc
Confidence 4788888875 699999999999999999999964
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.23 E-value=0.28 Score=33.02 Aligned_cols=34 Identities=18% Similarity=0.198 Sum_probs=29.5
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE 47 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~ 47 (263)
.|.++|.|| |.||..+|..|++.|.+|.++.|.+
T Consensus 23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~ 56 (122)
T d1v59a2 23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP 56 (122)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence 467788775 6899999999999999999998865
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=93.19 E-value=0.22 Score=36.19 Aligned_cols=42 Identities=19% Similarity=0.167 Sum_probs=34.3
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHH
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQ 55 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~ 55 (263)
.-.|+|.|+. -.|++-++.....|++|.++|.+.+.++++..
T Consensus 29 pa~VvViGaG-vaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~ 70 (183)
T d1l7da1 29 PARVLVFGVG-VAGLQAIATAKRLGAVVMATDVRAATKEQVES 70 (183)
T ss_dssp CCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH
T ss_pred CcEEEEEcCc-HHHHHHHHHHHHcCCEEEEEeccHHHHHHHHH
Confidence 3467777764 56999999999999999999999988776653
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=93.17 E-value=0.27 Score=32.91 Aligned_cols=36 Identities=22% Similarity=0.083 Sum_probs=30.5
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE 47 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~ 47 (263)
-..|.++|.|| |.||..+|..|++.|.+|.++.+..
T Consensus 20 ~~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~ 55 (119)
T d3lada2 20 NVPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD 55 (119)
T ss_dssp SCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred cCCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence 34578888875 7899999999999999999988765
|
| >d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=93.16 E-value=1.1 Score=32.74 Aligned_cols=142 Identities=14% Similarity=0.039 Sum_probs=77.7
Q ss_pred CCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 11 LKGMTALVTGGT--KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 11 ~~~k~vlVtGas--~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
..+.++++.... .....+++..|.+.|..|+.+.-+.. .+.+. +.+.+ ...
T Consensus 23 ~~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~-----------------------~~~~~---l~~~~-~~~ 75 (209)
T d2fr1a2 23 LDGTWLVAKYAGTADETSTAAREALESAGARVRELVVDAR-----------------------CGRDE---LAERL-RSV 75 (209)
T ss_dssp CCSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCTT-----------------------CCHHH---HHHHH-TTS
T ss_pred CCCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCCc-----------------------cCHHH---HHHHh-hcc
Confidence 345555554332 24667788888888887765544322 11222 22222 222
Q ss_pred CCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEccccccccCCCCcchhhHHH
Q 024752 89 DGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVAGVIAIPMCSIYASSKV 168 (263)
Q Consensus 89 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 168 (263)
+.++.+|+..+........ .+ . ....+...+.++|++.. .....++.+++...... .+....-....+
T Consensus 76 -~~~~~vv~l~~~~~~~~~~-~~--~----~~~~~~~~l~l~qal~~---~~~~~~l~~vT~~a~~~-~~~d~~~~p~~A 143 (209)
T d2fr1a2 76 -GEVAGVLSLLAVDEAEPEE-AP--L----ALASLADTLSLVQAMVS---AELGCPLWTVTESAVAT-GPFERVRNAAHG 143 (209)
T ss_dssp -CCCSEEEECTTTTCCCCSS-CG--G----GCHHHHHHHHHHHHHHH---TTCCCCEEEEEESCSCS-STTSCCSCGGGH
T ss_pred -CCCCeEEEeCCCCCCCCcc-hh--H----HHHHHHHHHHHHHHHHh---CCCCCcEEEEEcCCccc-CCCcccCCHhHH
Confidence 5788888887654332211 11 1 11123444556666532 23346777776543322 223334467889
Q ss_pred HHHHHHHHHHHHHccCCcEEEEE
Q 024752 169 AMNQLTKNLACEWAKDKIRVNTV 191 (263)
Q Consensus 169 a~~~~~~~~a~e~~~~gi~v~~v 191 (263)
++-+|+|+++.|+....+++..+
T Consensus 144 ~l~Gl~r~~~~E~P~l~~~~vDl 166 (209)
T d2fr1a2 144 ALWGVGRVIALENPAVWGGLVDV 166 (209)
T ss_dssp HHHHHHHHHHHHCGGGEEEEEEE
T ss_pred hHHHHHHHHHHhCCCceEEEEEC
Confidence 99999999999987655555555
|
| >d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Putative methyltransferase SPy1538 species: Streptococcus pyogenes [TaxId: 1314]
Probab=93.10 E-value=0.68 Score=32.22 Aligned_cols=77 Identities=9% Similarity=0.086 Sum_probs=54.3
Q ss_pred CCCCCEEEEecCCCc-hHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhcC--CceEEEeccCCCHHHHHHHHHHHH
Q 024752 10 SLKGMTALVTGGTKG-IGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSKG--LQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 10 ~~~~k~vlVtGas~g-iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
+++|++||=.|+++| +|. .++.+|+ +|+.++.+++..+...+.+...+ .++..+..|.. ..++.
T Consensus 12 ~~~g~~vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~------~~l~~-- 79 (152)
T d2esra1 12 YFNGGRVLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAE------RAIDC-- 79 (152)
T ss_dssp CCCSCEEEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHH------HHHHH--
T ss_pred hCCCCeEEEcCCccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhccccc------ccccc--
Confidence 578999996666655 444 4567887 79999999998887777766543 45888888853 22222
Q ss_pred hhcCCCccEEEeCCC
Q 024752 86 SQFDGKLNILINNAG 100 (263)
Q Consensus 86 ~~~~~~id~li~~ag 100 (263)
. ..+.|+++.+..
T Consensus 80 -~-~~~fDiIf~DPP 92 (152)
T d2esra1 80 -L-TGRFDLVFLDPP 92 (152)
T ss_dssp -B-CSCEEEEEECCS
T ss_pred -c-ccccceeEechh
Confidence 1 267899988765
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=93.04 E-value=0.044 Score=40.03 Aligned_cols=42 Identities=14% Similarity=0.166 Sum_probs=32.3
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHh
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKS 59 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~ 59 (263)
+|.|.|+ |..|.++|..|++.|++|.+.+|..+. +..++++.
T Consensus 2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~--~~~~~i~~ 43 (180)
T d1txga2 2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDT--EILKSISA 43 (180)
T ss_dssp EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGH--HHHHHHHT
T ss_pred EEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccH--HHHHHHhh
Confidence 5667776 678999999999999999999996553 34455543
|
| >d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Methyltransferase TTHA0928 species: Thermus thermophilus [TaxId: 274]
Probab=92.95 E-value=0.77 Score=32.69 Aligned_cols=81 Identities=12% Similarity=0.048 Sum_probs=49.7
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
.+|++||=.|+++|. ++..++++|++|+.++.+++..+.+.+.++..+........|. ..+....... ..
T Consensus 40 ~~g~~vLDl~~G~G~---~~i~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~------d~~~~~~~~~-~~ 109 (171)
T d1ws6a1 40 PRRGRFLDPFAGSGA---VGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPV------EVFLPEAKAQ-GE 109 (171)
T ss_dssp TTCCEEEEETCSSCH---HHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCH------HHHHHHHHHT-TC
T ss_pred cCCCeEEEeccccch---hhhhhhhccchhhhcccCHHHHhhhhHHHHhhccccceeeeeh------hccccccccc-CC
Confidence 367777755555542 3345667899999999999998877777665544333333321 1222222222 25
Q ss_pred CccEEEeCCCC
Q 024752 91 KLNILINNAGT 101 (263)
Q Consensus 91 ~id~li~~ag~ 101 (263)
+.|+++.+..+
T Consensus 110 ~fD~If~DPPY 120 (171)
T d1ws6a1 110 RFTVAFMAPPY 120 (171)
T ss_dssp CEEEEEECCCT
T ss_pred ccceeEEcccc
Confidence 79999988653
|
| >d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 3, PRMT3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.84 E-value=0.26 Score=38.94 Aligned_cols=76 Identities=17% Similarity=0.097 Sum_probs=53.4
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhc--CCceEEEeccCCCHHHHHHHHHHHH
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSK--GLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
-.++||+||-.|++.|+ ++..++++|+ +|++++.++... ...+..... ..++.++..|+.+...
T Consensus 32 ~~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~~-~a~~~~~~~~~~~~i~~~~~~~~~l~~--------- 98 (311)
T d2fyta1 32 HIFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEILY-QAMDIIRLNKLEDTITLIKGKIEEVHL--------- 98 (311)
T ss_dssp GGTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHHH-HHHHHHHHTTCTTTEEEEESCTTTSCC---------
T ss_pred ccCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHHH-HHHHHHHHhCCCccceEEEeeHHHhcC---------
Confidence 34689999999999886 6677888997 799999887543 333333333 4568888888875321
Q ss_pred hhcCCCccEEEeCC
Q 024752 86 SQFDGKLNILINNA 99 (263)
Q Consensus 86 ~~~~~~id~li~~a 99 (263)
. ..++|+++..-
T Consensus 99 -~-~~~~D~Ivse~ 110 (311)
T d2fyta1 99 -P-VEKVDVIISEW 110 (311)
T ss_dssp -S-CSCEEEEEECC
T ss_pred -c-cccceEEEEee
Confidence 1 25799998753
|
| >d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical protein PH0226 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=92.77 E-value=0.27 Score=36.30 Aligned_cols=76 Identities=18% Similarity=0.045 Sum_probs=57.4
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
++.+||=.||+.|. ++..|++.|++|++++.++..++...+.....+..+..+..|..+.. .. ...
T Consensus 37 ~~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~----------~~-~~~ 102 (226)
T d1ve3a1 37 KRGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLS----------FE-DKT 102 (226)
T ss_dssp SCCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCC----------SC-TTC
T ss_pred CCCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhcccccccccccccccccc----------cc-CcC
Confidence 35678999999886 66788899999999999998887777666666667777888876521 00 257
Q ss_pred ccEEEeCCCC
Q 024752 92 LNILINNAGT 101 (263)
Q Consensus 92 id~li~~ag~ 101 (263)
.|++++...+
T Consensus 103 fD~I~~~~~l 112 (226)
T d1ve3a1 103 FDYVIFIDSI 112 (226)
T ss_dssp EEEEEEESCG
T ss_pred ceEEEEecch
Confidence 8999987654
|
| >d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=92.65 E-value=0.36 Score=35.88 Aligned_cols=79 Identities=16% Similarity=0.138 Sum_probs=57.2
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcC-CceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG-LQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
|.+||-.|+++|--.++..++...+.+|+.++.+++..+...+.+...+ .++.++..|..+.- . . .++
T Consensus 76 g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~---------~-~-~~~ 144 (213)
T d1dl5a1 76 GMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV---------P-E-FSP 144 (213)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC---------G-G-GCC
T ss_pred cceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHcc---------c-c-ccc
Confidence 7899999999887776666666566799999999998888887776653 35666666754210 0 1 157
Q ss_pred ccEEEeCCCCC
Q 024752 92 LNILINNAGTF 102 (263)
Q Consensus 92 id~li~~ag~~ 102 (263)
+|.++.+++..
T Consensus 145 fD~I~~~~~~~ 155 (213)
T d1dl5a1 145 YDVIFVTVGVD 155 (213)
T ss_dssp EEEEEECSBBS
T ss_pred hhhhhhhccHH
Confidence 99999988753
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=92.65 E-value=0.23 Score=33.04 Aligned_cols=35 Identities=20% Similarity=0.195 Sum_probs=29.3
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCch
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET 48 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~ 48 (263)
.|+++|.|| |.+|..+|..|++.|.+|.++.|.+.
T Consensus 21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~ 55 (116)
T d1gesa2 21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDA 55 (116)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecch
Confidence 367777664 78999999999999999999998753
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=92.60 E-value=0.062 Score=39.25 Aligned_cols=37 Identities=22% Similarity=0.201 Sum_probs=32.4
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCch
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET 48 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~ 48 (263)
.+.|+|+|.||.-. |.+.|..|+++|++|.++.++..
T Consensus 41 ~~~k~V~IIGaGPA-GL~AA~~la~~G~~Vtl~E~~~~ 77 (179)
T d1ps9a3 41 VQKKNLAVVGAGPA-GLAFAINAAARGHQVTLFDAHSE 77 (179)
T ss_dssp SSCCEEEEECCSHH-HHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCCcEEEEECccHH-HHHHHHHHHhhccceEEEeccCc
Confidence 56799999998655 99999999999999999999753
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=92.55 E-value=0.06 Score=41.68 Aligned_cols=37 Identities=27% Similarity=0.368 Sum_probs=32.8
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEee
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCS 44 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~ 44 (263)
...+++||+++|.| .|-+|..+++.|.+.|++|+.++
T Consensus 30 ~~~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs 66 (255)
T d1bgva1 30 ENDTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS 66 (255)
T ss_dssp TTCCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence 34689999999999 68999999999999999988764
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=92.42 E-value=0.11 Score=37.91 Aligned_cols=38 Identities=37% Similarity=0.386 Sum_probs=34.4
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCch
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET 48 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~ 48 (263)
.++||++.|.|.+. ||+.+++.+...|.+|+..+|.+.
T Consensus 39 ~l~gk~vgIiG~G~-IG~~va~~l~~~g~~v~~~d~~~~ 76 (181)
T d1qp8a1 39 LIQGEKVAVLGLGE-IGTRVGKILAALGAQVRGFSRTPK 76 (181)
T ss_dssp CCTTCEEEEESCST-HHHHHHHHHHHTTCEEEEECSSCC
T ss_pred cccCceEEEecccc-ccccceeeeecccccccccccccc
Confidence 48899999999866 999999999999999999999764
|
| >d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=92.40 E-value=0.17 Score=38.49 Aligned_cols=36 Identities=22% Similarity=0.197 Sum_probs=30.9
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHH-CCCeEEEee
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAA-FGAIVHTCS 44 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~-~g~~V~~~~ 44 (263)
..++++|+++|-| .|-+|+.+++.|.+ .|++|+.++
T Consensus 26 ~~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs 62 (234)
T d1b26a1 26 GIDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS 62 (234)
T ss_dssp TCCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred CCCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence 4589999999997 78999999999975 599988765
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=92.14 E-value=0.13 Score=38.14 Aligned_cols=38 Identities=18% Similarity=0.100 Sum_probs=31.8
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHH
Q 024752 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRI 54 (263)
Q Consensus 16 vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~ 54 (263)
+.|. |.|.+|..+|..|++.|++|++++.+++..+.+.
T Consensus 3 I~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln 40 (202)
T d1mv8a2 3 ISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLIN 40 (202)
T ss_dssp EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred EEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhc
Confidence 4555 7789999999999999999999999987665543
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=92.08 E-value=0.094 Score=40.21 Aligned_cols=35 Identities=26% Similarity=0.277 Sum_probs=31.8
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEee
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCS 44 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~ 44 (263)
.+++||+|+|-| .|-+|.++|+.|.+.|++|+.++
T Consensus 27 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs 61 (242)
T d1v9la1 27 GGIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS 61 (242)
T ss_dssp SCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence 479999999997 78899999999999999988766
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=92.00 E-value=0.28 Score=35.77 Aligned_cols=42 Identities=26% Similarity=0.404 Sum_probs=36.0
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchh
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE 49 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~ 49 (263)
...+++++++.|.| .|.||+++++.|...|.+|+..++....
T Consensus 38 ~~~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~ 79 (188)
T d2naca1 38 HAYDLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLP 79 (188)
T ss_dssp TCCCCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCC
T ss_pred cceeccccceeecc-ccccchhhhhhhhccCceEEEEeecccc
Confidence 34578999999998 5789999999999999999999987544
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=91.93 E-value=0.14 Score=35.94 Aligned_cols=39 Identities=13% Similarity=0.057 Sum_probs=31.1
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHH
Q 024752 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQ 55 (263)
Q Consensus 16 vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~ 55 (263)
+-|. |.|-+|.++++.|++.|+.|+..+++.........
T Consensus 3 IgiI-G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~ 41 (152)
T d1i36a2 3 VGFI-GFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERA 41 (152)
T ss_dssp EEEE-SCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHH
T ss_pred EEEE-cHHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhh
Confidence 4455 45899999999999999999999988776654443
|
| >d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein TT1466 species: Thermus thermophilus [TaxId: 274]
Probab=91.92 E-value=0.25 Score=34.06 Aligned_cols=46 Identities=22% Similarity=0.114 Sum_probs=34.0
Q ss_pred CcccccccCCCCCCEEEEecCCC---chHHHHHHHHHHCCCeEEEeeCC
Q 024752 1 MSDFREQRWSLKGMTALVTGGTK---GIGYAVVEELAAFGAIVHTCSRN 46 (263)
Q Consensus 1 ~~~~~~~~~~~~~k~vlVtGas~---giG~~~a~~l~~~g~~V~~~~r~ 46 (263)
|+|.....+=++-|.+.|.|+|. ..|..+.+.|.+.|++++.+.-+
T Consensus 1 M~d~~i~~~L~~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~ 49 (136)
T d1iuka_ 1 MNDQELRAYLSQAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPR 49 (136)
T ss_dssp CCHHHHHHHHHHCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGG
T ss_pred CCHHHHHHHHhCCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEec
Confidence 44443322223568999999994 68999999999999998877654
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=91.90 E-value=0.16 Score=36.25 Aligned_cols=45 Identities=16% Similarity=0.272 Sum_probs=38.5
Q ss_pred ccccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhH
Q 024752 5 REQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETEL 50 (263)
Q Consensus 5 ~~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~ 50 (263)
|....-+.||+++|.| -|-+|+.+|++|...|++|+++..+|-.+
T Consensus 15 r~t~~~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~a 59 (163)
T d1v8ba1 15 RATDFLISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICA 59 (163)
T ss_dssp HHHCCCCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHH
T ss_pred HHhCceecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchhh
Confidence 3445668999999987 56799999999999999999999998653
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=91.87 E-value=0.28 Score=33.01 Aligned_cols=35 Identities=17% Similarity=0.143 Sum_probs=30.2
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCch
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET 48 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~ 48 (263)
.|.++|.|| |-||..+|..|.+.|.+|.++.|.+.
T Consensus 25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~ 59 (123)
T d1dxla2 25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASE 59 (123)
T ss_dssp CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccc
Confidence 477888775 78999999999999999999988653
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=91.80 E-value=0.18 Score=36.77 Aligned_cols=42 Identities=31% Similarity=0.311 Sum_probs=36.1
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhH
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETEL 50 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~ 50 (263)
..++.+|++.|.| .|.||+++++.+...|.+|+..++.....
T Consensus 39 ~~~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~ 80 (184)
T d1ygya1 39 GTEIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPA 80 (184)
T ss_dssp BCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHH
T ss_pred cccccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCChh
Confidence 4458899999998 68899999999999999999999876553
|
| >d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=91.78 E-value=0.039 Score=36.59 Aligned_cols=40 Identities=20% Similarity=0.154 Sum_probs=32.3
Q ss_pred ccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc
Q 024752 7 QRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE 47 (263)
Q Consensus 7 ~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~ 47 (263)
.+.+++||+|+|.|++.. |..+|..|++.+.+|+...|..
T Consensus 26 ~~~~f~gK~VlVVG~g~S-a~dia~~l~~~ak~v~~~~~r~ 65 (107)
T d2gv8a2 26 EPELFVGESVLVVGGASS-ANDLVRHLTPVAKHPIYQSLLG 65 (107)
T ss_dssp CGGGGTTCCEEEECSSHH-HHHHHHHHTTTSCSSEEEECTT
T ss_pred chhhcCCCeEEEECCCCC-HHHHHHHHHHhcCEEEEEEecC
Confidence 456799999999998744 8899999998888766666654
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=91.70 E-value=0.1 Score=39.77 Aligned_cols=37 Identities=22% Similarity=0.207 Sum_probs=31.2
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCch
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET 48 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~ 48 (263)
...++|+|.||+-. |..+|..|+++|++|+++.|++.
T Consensus 2 ~~~~kV~IiGaG~a-Gl~~A~~L~~~G~~v~v~Er~~~ 38 (265)
T d2voua1 2 PTTDRIAVVGGSIS-GLTAALMLRDAGVDVDVYERSPQ 38 (265)
T ss_dssp CCCSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCCcEEEECcCHH-HHHHHHHHHHCCCCEEEEeCCCC
Confidence 35678999998655 99999999999999999998653
|
| >d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: CheY-like family: CheY-related domain: CheY protein species: Thermotoga maritima [TaxId: 2336]
Probab=91.70 E-value=0.54 Score=31.21 Aligned_cols=81 Identities=12% Similarity=0.128 Sum_probs=54.9
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCH-HHHHHHHHHHHhhcCCC
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIR-AQREKLMETVSSQFDGK 91 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~~ 91 (263)
||+|||.--...+-..+...|.+.|++|+....+...+-+.. .+....+ +.+|+.-+ .+--+++.++++.. ..
T Consensus 1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~al~~~---~~~~~dl--iilD~~mp~~~G~e~~~~ir~~~-~~ 74 (118)
T d1u0sy_ 1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVEKY---KELKPDI--VTMDITMPEMNGIDAIKEIMKID-PN 74 (118)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH---HHHCCSE--EEEECSCGGGCHHHHHHHHHHHC-TT
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHHHHHH---HhccCCE--EEEecCCCCCCHHHHHHHHHHhC-CC
Confidence 789999999999999999999999999987766654433333 3333444 44555432 24456777777765 55
Q ss_pred ccEEEeCC
Q 024752 92 LNILINNA 99 (263)
Q Consensus 92 id~li~~a 99 (263)
+-+++..+
T Consensus 75 ~pvi~ls~ 82 (118)
T d1u0sy_ 75 AKIIVCSA 82 (118)
T ss_dssp CCEEEEEC
T ss_pred CcEEEEEc
Confidence 66666543
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=91.52 E-value=0.38 Score=32.28 Aligned_cols=32 Identities=25% Similarity=0.242 Sum_probs=27.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCC
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN 46 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~ 46 (263)
|.++|.|| |-||..+|..|.+.|.+|.++.|+
T Consensus 21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~ 52 (122)
T d1h6va2 21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS 52 (122)
T ss_dssp CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence 56677764 789999999999999999998876
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=91.44 E-value=0.49 Score=31.39 Aligned_cols=36 Identities=25% Similarity=0.200 Sum_probs=30.8
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCch
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET 48 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~ 48 (263)
++|.++|.|+ |-+|..+|..|++.|..|.++.|.+.
T Consensus 21 ~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~ 56 (121)
T d1mo9a2 21 PGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP 56 (121)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence 4688887775 78999999999999999999998653
|
| >d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.40 E-value=0.6 Score=34.93 Aligned_cols=80 Identities=15% Similarity=0.143 Sum_probs=59.8
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcC------CceEEEeccCCCHHHHHHHHHHHH
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG------LQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
+|.+||-.|+++|.-.++.-++.....+|+.++++++-.+...+.+...+ .++.+...|..+.. .
T Consensus 76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~---------~ 146 (224)
T d1i1na_ 76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY---------A 146 (224)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC---------G
T ss_pred CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeeccccc---------c
Confidence 47899999999998888888888878899999999988887766665422 34666777754210 0
Q ss_pred hhcCCCccEEEeCCCCC
Q 024752 86 SQFDGKLNILINNAGTF 102 (263)
Q Consensus 86 ~~~~~~id~li~~ag~~ 102 (263)
. ..++|.++.+++..
T Consensus 147 -~-~~~fD~I~~~~~~~ 161 (224)
T d1i1na_ 147 -E-EAPYDAIHVGAAAP 161 (224)
T ss_dssp -G-GCCEEEEEECSBBS
T ss_pred -h-hhhhhhhhhhcchh
Confidence 1 15799999998864
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=91.23 E-value=0.13 Score=38.81 Aligned_cols=34 Identities=29% Similarity=0.265 Sum_probs=28.7
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE 47 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~ 47 (263)
.|+|+|.||. -.|...|..|+++|++|.++.|+.
T Consensus 6 ~~kVvVIGaG-iaGl~~A~~L~~~G~~V~vier~~ 39 (268)
T d1c0pa1 6 QKRVVVLGSG-VIGLSSALILARKGYSVHILARDL 39 (268)
T ss_dssp SCEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCcEEEECcc-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence 4578888764 559999999999999999999864
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=91.17 E-value=1.7 Score=30.70 Aligned_cols=118 Identities=7% Similarity=0.050 Sum_probs=62.1
Q ss_pred CCEEEEecCCCchHHHHHHHHHHC-----CCeEEEeeCCchhHHHHHHHHHh----cCCceEEE-eccCCCHHHHHHHHH
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAF-----GAIVHTCSRNETELNQRIQEWKS----KGLQVSGS-VCDLKIRAQREKLME 82 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~-----g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~-~~D~~~~~~~~~~~~ 82 (263)
.-++.|.||++.....+...++.+ +.+++++|.++++++.....+.. .+...... ..| ..+++
T Consensus 3 ~~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~d------~~eal- 75 (167)
T d1u8xx1 3 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTD------PEEAF- 75 (167)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESC------HHHHH-
T ss_pred CceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecCC------hhhcc-
Confidence 345666777554333333344432 23799999999988754444332 23332222 222 12222
Q ss_pred HHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhh----------------HhHHHHHHHHhHHHhhC-CCceE
Q 024752 83 TVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNF----------------ESAYHLSQLAHPLLKSA-GNGNI 145 (263)
Q Consensus 83 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~----------------~~~~~~~~~~~~~~~~~-~~~~i 145 (263)
..-|+||+.+|.... +..+-++.+..|. +-...+++.+.+.+.+. +.+-+
T Consensus 76 -------~~AD~Vvitag~~~~------~g~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~~P~A~l 142 (167)
T d1u8xx1 76 -------TDVDFVMAHIRVGKY------AMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWM 142 (167)
T ss_dssp -------SSCSEEEECCCTTHH------HHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred -------CCCCEEEECCCcCCC------CceeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhhCCCeEE
Confidence 467999999997532 1223333444442 22344556666666664 45566
Q ss_pred EEEcc
Q 024752 146 IFISS 150 (263)
Q Consensus 146 v~vsS 150 (263)
+++|-
T Consensus 143 i~~TN 147 (167)
T d1u8xx1 143 LNYSN 147 (167)
T ss_dssp EECCS
T ss_pred EEeCC
Confidence 66653
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=91.15 E-value=0.16 Score=37.55 Aligned_cols=40 Identities=23% Similarity=0.250 Sum_probs=34.9
Q ss_pred CCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchh
Q 024752 9 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETE 49 (263)
Q Consensus 9 ~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~ 49 (263)
-+++||++.|.|. |.||+.+|+.+...|++|+..++....
T Consensus 39 ~el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~~ 78 (197)
T d1j4aa1 39 REVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRNP 78 (197)
T ss_dssp CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH
T ss_pred ccccCCeEEEecc-cccchhHHHhHhhhcccccccCccccc
Confidence 3588999999985 789999999999999999999987653
|
| >d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Sulfolobus tokodaii [TaxId: 111955]
Probab=91.13 E-value=0.43 Score=35.84 Aligned_cols=75 Identities=17% Similarity=0.011 Sum_probs=52.9
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
+|.+||-.|+++|.-.+ .|++.+.+|+.+.++++..+...+.+. ...++.++..|.... ..+ . ++
T Consensus 70 ~g~~VLdIG~GsGy~ta---~La~l~~~V~aiE~~~~~~~~A~~~~~-~~~nv~~~~~d~~~g---------~~~-~-~p 134 (224)
T d1vbfa_ 70 KGQKVLEIGTGIGYYTA---LIAEIVDKVVSVEINEKMYNYASKLLS-YYNNIKLILGDGTLG---------YEE-E-KP 134 (224)
T ss_dssp TTCEEEEECCTTSHHHH---HHHHHSSEEEEEESCHHHHHHHHHHHT-TCSSEEEEESCGGGC---------CGG-G-CC
T ss_pred ccceEEEecCCCCHHHH---HHHHHhcccccccccHHHHHHHHHHHh-cccccccccCchhhc---------chh-h-hh
Confidence 37889999999986444 456667899999999887766554433 345788888887531 011 1 67
Q ss_pred ccEEEeCCCC
Q 024752 92 LNILINNAGT 101 (263)
Q Consensus 92 id~li~~ag~ 101 (263)
.|.++.+++.
T Consensus 135 fD~Iiv~~a~ 144 (224)
T d1vbfa_ 135 YDRVVVWATA 144 (224)
T ss_dssp EEEEEESSBB
T ss_pred HHHHHhhcch
Confidence 9999998875
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=91.09 E-value=0.17 Score=39.73 Aligned_cols=36 Identities=22% Similarity=0.193 Sum_probs=32.2
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEee
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCS 44 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~ 44 (263)
..+++||+++|-|- |-+|..+|+.|.+.|++|+.++
T Consensus 31 ~~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs 66 (293)
T d1hwxa1 31 TPGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG 66 (293)
T ss_dssp CSSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence 34799999999987 7899999999999999988776
|
| >d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N5-glutamine methyltransferase, HemK domain: N5-glutamine methyltransferase, HemK species: Thermotoga maritima [TaxId: 2336]
Probab=91.04 E-value=1.1 Score=34.57 Aligned_cols=78 Identities=15% Similarity=0.173 Sum_probs=52.8
Q ss_pred CEEEEecCCCc-hHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcC--CceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 14 MTALVTGGTKG-IGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG--LQVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 14 k~vlVtGas~g-iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
++++-.|+++| |+.+++ + ...++|++++.+++.++-..+..+..+ .++.....|+.+. ....+ +
T Consensus 112 ~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~-~ 178 (271)
T d1nv8a_ 112 KTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------FKEKF-A 178 (271)
T ss_dssp CEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGT-T
T ss_pred cEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc---------ccccc-C
Confidence 45665555555 555544 2 357899999999999887777766543 3566677787632 22223 6
Q ss_pred CccEEEeCCCCCCC
Q 024752 91 KLNILINNAGTFIP 104 (263)
Q Consensus 91 ~id~li~~ag~~~~ 104 (263)
++|++|.|..+...
T Consensus 179 ~fDlIVsNPPYI~~ 192 (271)
T d1nv8a_ 179 SIEMILSNPPYVKS 192 (271)
T ss_dssp TCCEEEECCCCBCG
T ss_pred cccEEEEcccccCc
Confidence 89999999998754
|
| >d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=90.90 E-value=0.31 Score=37.09 Aligned_cols=35 Identities=31% Similarity=0.475 Sum_probs=29.2
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHH-CCCeEEEeeC
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAA-FGAIVHTCSR 45 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~-~g~~V~~~~r 45 (263)
+++||+++|-|- |.+|.++++.|++ .|++|+.+.-
T Consensus 29 ~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vsD 64 (239)
T d1gtma1 29 TLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVSD 64 (239)
T ss_dssp CSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeeccc
Confidence 489999999997 6699999999986 5998876653
|
| >d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=90.85 E-value=0.32 Score=34.83 Aligned_cols=35 Identities=11% Similarity=0.041 Sum_probs=23.6
Q ss_pred EEEEecC-CCchHHHHHHHHHHCC----CeEEEeeCCchh
Q 024752 15 TALVTGG-TKGIGYAVVEELAAFG----AIVHTCSRNETE 49 (263)
Q Consensus 15 ~vlVtGa-s~giG~~~a~~l~~~g----~~V~~~~r~~~~ 49 (263)
++.|.|| +.+.+..++..+.... -.+++++.+++.
T Consensus 3 KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~ 42 (169)
T d1s6ya1 3 KIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGK 42 (169)
T ss_dssp EEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGH
T ss_pred EEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccH
Confidence 3555565 5677777777666542 379999998864
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=90.76 E-value=1.4 Score=29.05 Aligned_cols=83 Identities=12% Similarity=0.083 Sum_probs=49.7
Q ss_pred CEEEEecCC---CchHHHHHHHHHHCCCeEEEeeCCchhHH--HHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 14 MTALVTGGT---KGIGYAVVEELAAFGAIVHTCSRNETELN--QRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 14 k~vlVtGas---~giG~~~a~~l~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
|.+.|.|+| +..|..+.+.|.+.|++|+.+..+.+... .....+.+....+..+ .=....+.+.++++++.+.
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~~lp~~~D~v-vi~vp~~~~~~~l~~~~~~- 79 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVI-VFVVPPKVGLQVAKEAVEA- 79 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEE-EECSCHHHHHHHHHHHHHT-
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccccCccccccchhccccceEE-EEEeCHHHHHHHHHHHHhc-
Confidence 789999999 56899999999999999998875543211 1111121211122211 1123466677777776664
Q ss_pred CCCccEEEeCCC
Q 024752 89 DGKLNILINNAG 100 (263)
Q Consensus 89 ~~~id~li~~ag 100 (263)
.+..++...|
T Consensus 80 --g~k~v~~~~g 89 (116)
T d1y81a1 80 --GFKKLWFQPG 89 (116)
T ss_dssp --TCCEEEECTT
T ss_pred --CCceEEeccc
Confidence 3456665555
|
| >d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Dethiobiotin synthetase species: Escherichia coli [TaxId: 562]
Probab=90.74 E-value=0.079 Score=39.24 Aligned_cols=32 Identities=22% Similarity=0.226 Sum_probs=27.9
Q ss_pred CEEEEecCCCchHH-----HHHHHHHHCCCeEEEeeC
Q 024752 14 MTALVTGGTKGIGY-----AVVEELAAFGAIVHTCSR 45 (263)
Q Consensus 14 k~vlVtGas~giG~-----~~a~~l~~~g~~V~~~~r 45 (263)
|+.+|||.++|.|+ .+|+.|+++|.+|.+++-
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id~ 38 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKP 38 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEECc
Confidence 78999999989887 578889999999999873
|
| >d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TehB-like domain: Putative methyltransferase TehB species: Salmonella typhimurium [TaxId: 90371]
Probab=90.74 E-value=0.78 Score=33.21 Aligned_cols=77 Identities=21% Similarity=0.250 Sum_probs=56.5
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCC-ceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL-QVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
+++.+||=.|++.|. .+..|+++|++|+.++.++..++.........+. .+.+...|+.+.. +.
T Consensus 29 ~~~grvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~------------~~ 93 (198)
T d2i6ga1 29 VAPGRTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLT------------FD 93 (198)
T ss_dssp SCSCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCC------------CC
T ss_pred CCCCcEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheeccccc------------cc
Confidence 456789999997553 5678899999999999999988877766665543 4677778876432 12
Q ss_pred CCccEEEeCCCCC
Q 024752 90 GKLNILINNAGTF 102 (263)
Q Consensus 90 ~~id~li~~ag~~ 102 (263)
+..|+++.+.-+.
T Consensus 94 ~~fD~I~~~~~~~ 106 (198)
T d2i6ga1 94 GEYDFILSTVVMM 106 (198)
T ss_dssp CCEEEEEEESCGG
T ss_pred ccccEEEEeeeee
Confidence 5789998876543
|
| >d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=90.35 E-value=0.15 Score=38.07 Aligned_cols=44 Identities=18% Similarity=0.247 Sum_probs=36.0
Q ss_pred ccccccCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc
Q 024752 3 DFREQRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE 47 (263)
Q Consensus 3 ~~~~~~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~ 47 (263)
++.+...+++||+|+|.|++.. |-.+|..+++.++.++.+.|..
T Consensus 22 ~~~~~~~~~~gK~V~VvG~G~S-a~dia~~~~~~~~~~~~~~~~~ 65 (235)
T d1w4xa2 22 NWPHEPVDFSGQRVGVIGTGSS-GIQVSPQIAKQAAELFVFQRTP 65 (235)
T ss_dssp GCCSSCCCCBTCEEEEECCSHH-HHHHHHHHHHHBSEEEEEESSC
T ss_pred cCCCCCCCCCCCEEEEECCCcc-HHHHHHHHHhhhcccccccccc
Confidence 4444556799999999988765 8999999999999888877764
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=90.31 E-value=0.58 Score=31.09 Aligned_cols=34 Identities=12% Similarity=0.144 Sum_probs=29.0
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE 47 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~ 47 (263)
.|+++|.|| |.+|.++|..|++.|.+|.++.|..
T Consensus 22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~ 55 (117)
T d1onfa2 22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN 55 (117)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence 367777765 7899999999999999999999864
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=90.20 E-value=0.2 Score=37.75 Aligned_cols=37 Identities=22% Similarity=0.267 Sum_probs=31.9
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE 47 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~ 47 (263)
.-.+|.|+|.||+-. |...|..|+++|++|.++.++.
T Consensus 46 ~~~~k~VvIIGaGpA-Gl~aA~~l~~~G~~v~l~E~~~ 82 (233)
T d1djqa3 46 TKNKDSVLIVGAGPS-GSEAARVLMESGYTVHLTDTAE 82 (233)
T ss_dssp CSSCCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSS
T ss_pred ccCCceEEEEcccHH-HHHHHHHHHHhccceeeEeecc
Confidence 346799999998765 9999999999999999998765
|
| >d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein MJ0882 domain: Hypothetical protein MJ0882 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=90.11 E-value=0.9 Score=32.86 Aligned_cols=76 Identities=20% Similarity=0.100 Sum_probs=54.8
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc---CCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK---GLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
.++++||=.|++.| .++..+++.+.+|.+++.++...+...+.+... ..++.++..|+.+.- .
T Consensus 51 ~~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~~------~----- 116 (194)
T d1dusa_ 51 DKDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV------K----- 116 (194)
T ss_dssp CTTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC------T-----
T ss_pred CCCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhhh------c-----
Confidence 45889998888877 344566778889999999988887776666543 235788888875321 0
Q ss_pred cCCCccEEEeCCCC
Q 024752 88 FDGKLNILINNAGT 101 (263)
Q Consensus 88 ~~~~id~li~~ag~ 101 (263)
....|++++|..+
T Consensus 117 -~~~fD~Ii~~~p~ 129 (194)
T d1dusa_ 117 -DRKYNKIITNPPI 129 (194)
T ss_dssp -TSCEEEEEECCCS
T ss_pred -cCCceEEEEcccE
Confidence 2579999998654
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=90.09 E-value=0.16 Score=37.57 Aligned_cols=40 Identities=25% Similarity=0.215 Sum_probs=34.7
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCch
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET 48 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~ 48 (263)
..++.||++.|.|. |.||+.+++.+...|.+|+..++...
T Consensus 40 ~~~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~ 79 (199)
T d1dxya1 40 GKELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPM 79 (199)
T ss_dssp CCCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred cccccceeeeeeec-ccccccccccccccceeeeccCCccc
Confidence 34688999999986 67999999999999999999998654
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=89.99 E-value=0.77 Score=30.20 Aligned_cols=34 Identities=24% Similarity=0.224 Sum_probs=28.8
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE 47 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~ 47 (263)
.|.++|.| +|.+|..+|..|++.|.+|.++.|.+
T Consensus 21 p~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~ 54 (115)
T d1lvla2 21 PQHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARE 54 (115)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCeEEEEC-CCHHHHHHHHHHhhcccceEEEeeec
Confidence 46777775 57899999999999999999998864
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=89.77 E-value=0.16 Score=40.41 Aligned_cols=36 Identities=25% Similarity=0.328 Sum_probs=30.7
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCch
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET 48 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~ 48 (263)
|.|.++|.||+= -|..+|..|++.|++|.++.++..
T Consensus 1 k~KKI~IIGaG~-sGL~aA~~L~k~G~~V~viEk~~~ 36 (314)
T d2bi7a1 1 KSKKILIVGAGF-SGAVIGRQLAEKGHQVHIIDQRDH 36 (314)
T ss_dssp CCCEEEEECCSH-HHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCCEEEEECCcH-HHHHHHHHHHhCCCCEEEEECCCC
Confidence 578999998765 499999999999999999988764
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=89.77 E-value=1.7 Score=30.29 Aligned_cols=43 Identities=19% Similarity=0.183 Sum_probs=30.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHC--CCeEEEee--CCchhHHHHHHH
Q 024752 14 MTALVTGGTKGIGYAVVEELAAF--GAIVHTCS--RNETELNQRIQE 56 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~--g~~V~~~~--r~~~~~~~~~~~ 56 (263)
|++.|.|+||.||.....-..+. .++|+++. ++.+.+.+.+.+
T Consensus 2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~ 48 (151)
T d1q0qa2 2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLE 48 (151)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHH
T ss_pred CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHH
Confidence 67999999999999999988876 45665544 444444443333
|
| >d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 1, PRMT1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=89.74 E-value=0.77 Score=36.15 Aligned_cols=76 Identities=18% Similarity=0.082 Sum_probs=52.3
Q ss_pred CCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhc--CCceEEEeccCCCHHHHHHHHHHHHh
Q 024752 10 SLKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSK--GLQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 10 ~~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
..+||+||-.|++.|+ ++..+++.|+ +|++++.++. .....+..... ..++.++..|+.+.+.
T Consensus 31 ~~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~~~---------- 96 (316)
T d1oria_ 31 LFKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEVEL---------- 96 (316)
T ss_dssp HHTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTCCC----------
T ss_pred cCCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHHccc----------
Confidence 3589999999999885 5667788887 6999998764 44443433333 4568888888875321
Q ss_pred hcCCCccEEEeCCC
Q 024752 87 QFDGKLNILINNAG 100 (263)
Q Consensus 87 ~~~~~id~li~~ag 100 (263)
. ..++|+++..--
T Consensus 97 ~-~~~~D~ivs~~~ 109 (316)
T d1oria_ 97 P-VEKVDIIISEWM 109 (316)
T ss_dssp S-SSCEEEEEECCC
T ss_pred c-cceeEEEeeeee
Confidence 1 157999987633
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=89.70 E-value=0.13 Score=40.25 Aligned_cols=36 Identities=19% Similarity=0.232 Sum_probs=30.6
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCch
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET 48 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~ 48 (263)
+.|+|+|.||+-+ |..+|..|+++|++|.++.++..
T Consensus 29 ~pkkV~IIGaG~a-GLsaA~~L~~~G~~V~vlE~~~~ 64 (370)
T d2iida1 29 NPKHVVIVGAGMA-GLSAAYVLAGAGHQVTVLEASER 64 (370)
T ss_dssp SCCEEEEECCBHH-HHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCCeEEEECCCHH-HHHHHHHHHHCCCCEEEEeCCCC
Confidence 4578999988655 99999999999999999988653
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=89.67 E-value=0.49 Score=31.91 Aligned_cols=34 Identities=18% Similarity=0.247 Sum_probs=29.6
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE 47 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~ 47 (263)
.|.++|.|+ |.||..+|..|.+.|.+|.++.+.+
T Consensus 26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~ 59 (125)
T d1ojta2 26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD 59 (125)
T ss_dssp CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence 578888875 7899999999999999999998754
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=89.30 E-value=0.14 Score=37.07 Aligned_cols=35 Identities=14% Similarity=0.137 Sum_probs=29.0
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCch
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNET 48 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~ 48 (263)
+|+|+|.||+ -.|...|..|+++|+ .|.++.|...
T Consensus 4 ~~kVaIIGaG-paGl~aA~~l~~~G~~~V~v~E~~~~ 39 (196)
T d1gtea4 4 SAKIALLGAG-PASISCASFLARLGYSDITIFEKQEY 39 (196)
T ss_dssp GCCEEEECCS-HHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred CCEEEEECCh-HHHHHHHHHHHHCCCCeEEEEEecCc
Confidence 6888888875 559999999999999 5988888653
|
| >d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=89.24 E-value=1 Score=31.27 Aligned_cols=82 Identities=12% Similarity=0.093 Sum_probs=52.8
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc------CCceEEEeccCCCHHHHHHHHHHHHhhcC
Q 024752 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK------GLQVSGSVCDLKIRAQREKLMETVSSQFD 89 (263)
Q Consensus 16 vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (263)
+-+.|- |-+|.++|++|++.|+.+ ...|+.++.++..++.... -.....+...+.+.+.+....+.+....
T Consensus 3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~- 79 (156)
T d2cvza2 3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYL- 79 (156)
T ss_dssp EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTC-
T ss_pred EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhccccccc-
Confidence 445555 788999999999988866 5677777776666554321 0123344455667778888887776654
Q ss_pred CCccEEEeCCC
Q 024752 90 GKLNILINNAG 100 (263)
Q Consensus 90 ~~id~li~~ag 100 (263)
.+-.++|.+.-
T Consensus 80 ~~~~~iid~sT 90 (156)
T d2cvza2 80 REGTYWVDATS 90 (156)
T ss_dssp CTTEEEEECSC
T ss_pred ccccccccccc
Confidence 34455555544
|
| >d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Putative methylase EF2452 species: Enterococcus faecalis [TaxId: 1351]
Probab=88.61 E-value=3 Score=29.70 Aligned_cols=81 Identities=12% Similarity=0.097 Sum_probs=55.9
Q ss_pred CCCCCEEEE-ecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhc--CCceEEEeccCCCHHHHHHHHHHHH
Q 024752 10 SLKGMTALV-TGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSK--GLQVSGSVCDLKIRAQREKLMETVS 85 (263)
Q Consensus 10 ~~~~k~vlV-tGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (263)
.++|+++|= ..|+|++|.+ .+++|+ .|+.++.+.+..+.+.+.+... ..++..+..|+ .+++.+..
T Consensus 39 ~~~~~~vLDlfaGsG~~g~e----a~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~------~~~l~~~~ 108 (182)
T d2fhpa1 39 YFDGGMALDLYSGSGGLAIE----AVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDA------NRALEQFY 108 (182)
T ss_dssp CCSSCEEEETTCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCH------HHHHHHHH
T ss_pred hcCCCEEEEcccccccccce----eeecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccc------hhhhhhhc
Confidence 467888884 4455556664 556888 5999999998888777766543 23577778885 34555544
Q ss_pred hhcCCCccEEEeCCCC
Q 024752 86 SQFDGKLNILINNAGT 101 (263)
Q Consensus 86 ~~~~~~id~li~~ag~ 101 (263)
+.. .+.|+++....+
T Consensus 109 ~~~-~~fDlIflDPPY 123 (182)
T d2fhpa1 109 EEK-LQFDLVLLDPPY 123 (182)
T ss_dssp HTT-CCEEEEEECCCG
T ss_pred ccC-CCcceEEechhh
Confidence 442 579999877754
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=88.54 E-value=0.72 Score=32.22 Aligned_cols=53 Identities=17% Similarity=0.115 Sum_probs=35.2
Q ss_pred CCEEEEecCCCchHHHHHHHHHHC--CCeEEEeeCCchhHHHHHHHHHhcCCceEE
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAF--GAIVHTCSRNETELNQRIQEWKSKGLQVSG 66 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~ 66 (263)
.|++.|.|+||.||.....-+.+. .++|+++.-+. ..+.+.+++.+...+..+
T Consensus 2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~-N~~~L~~q~~ef~Pk~v~ 56 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR-NVKDLADAAKRTNAKRAV 56 (150)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS-CHHHHHHHHHHTTCSEEE
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC-CHHHHHHHHHhhccccce
Confidence 489999999999999999988875 46766544332 223444444554444443
|
| >d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: mRNA cap (Guanine N-7) methyltransferase domain: mRNA cap (Guanine N-7) methyltransferase species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]
Probab=88.49 E-value=0.45 Score=36.10 Aligned_cols=79 Identities=14% Similarity=0.083 Sum_probs=56.0
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhc--CCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSK--GLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
-++++||=.|++.| ..+..+++.|. .|++++.++..++...+..... ..++.+..+|+....- .
T Consensus 23 ~~~~~VLDlGCG~G---~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~----------~ 89 (252)
T d1ri5a_ 23 KRGDSVLDLGCGKG---GDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHM----------D 89 (252)
T ss_dssp CTTCEEEEETCTTT---TTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCC----------C
T ss_pred CCcCEEEEecccCc---HHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhcc----------c
Confidence 46889999999876 23456677775 7999999999888877666544 3468888999753210 0
Q ss_pred cCCCccEEEeCCCCC
Q 024752 88 FDGKLNILINNAGTF 102 (263)
Q Consensus 88 ~~~~id~li~~ag~~ 102 (263)
..+..|+|+++-++.
T Consensus 90 ~~~~fD~V~~~~~l~ 104 (252)
T d1ri5a_ 90 LGKEFDVISSQFSFH 104 (252)
T ss_dssp CSSCEEEEEEESCGG
T ss_pred ccccceEEEEcceee
Confidence 124699998877654
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=87.96 E-value=0.59 Score=34.07 Aligned_cols=42 Identities=17% Similarity=0.121 Sum_probs=35.4
Q ss_pred cCCCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhH
Q 024752 8 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETEL 50 (263)
Q Consensus 8 ~~~~~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~ 50 (263)
..+++||++.|.|. |.||+.+++.+...|.+|+..++.....
T Consensus 42 ~~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~ 83 (191)
T d1gdha1 42 GEKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASS 83 (191)
T ss_dssp BCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCH
T ss_pred cceecccceEEeec-ccchHHHHHHHHhhcccccccccccccc
Confidence 35678999999975 6799999999999999999999866543
|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: Amyloid beta precursor protein-binding protein 1, APPBP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.94 E-value=0.2 Score=42.86 Aligned_cols=35 Identities=14% Similarity=0.207 Sum_probs=30.1
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCC
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRN 46 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~ 46 (263)
+++.+|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus 23 L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d 58 (529)
T d1yova1 23 LESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGN 58 (529)
T ss_dssp HHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCS
T ss_pred HhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCC
Confidence 56788999987 7899999999999998 68888764
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=87.78 E-value=3.3 Score=29.18 Aligned_cols=75 Identities=16% Similarity=0.151 Sum_probs=43.8
Q ss_pred CEEEEecCCCchHH--HHHHHHHHC----CCeEEEeeCCchhHHHHHHHHHh----cCCceEEEeccCCCHHHHHHHHHH
Q 024752 14 MTALVTGGTKGIGY--AVVEELAAF----GAIVHTCSRNETELNQRIQEWKS----KGLQVSGSVCDLKIRAQREKLMET 83 (263)
Q Consensus 14 k~vlVtGas~giG~--~~a~~l~~~----g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~ 83 (263)
.++.|.|| |.+|. ++...++.. +.+++++|+++++++.....+.. .+........ +| .++++
T Consensus 3 mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~--td---~~eaL-- 74 (171)
T d1obba1 3 VKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT--MN---LDDVI-- 74 (171)
T ss_dssp CEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE--SC---HHHHH--
T ss_pred cEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe--CC---hhhcc--
Confidence 45677776 54554 444455543 35899999999887755444432 2333332222 12 22233
Q ss_pred HHhhcCCCccEEEeCCCCC
Q 024752 84 VSSQFDGKLNILINNAGTF 102 (263)
Q Consensus 84 ~~~~~~~~id~li~~ag~~ 102 (263)
...|++++.++..
T Consensus 75 ------~dad~Vv~~~~~g 87 (171)
T d1obba1 75 ------IDADFVINTAMVG 87 (171)
T ss_dssp ------TTCSEEEECCCTT
T ss_pred ------cCCCeEeeecccc
Confidence 4679999999875
|
| >d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: NOL1/NOP2/sun domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=87.77 E-value=4.5 Score=31.02 Aligned_cols=127 Identities=14% Similarity=0.129 Sum_probs=72.7
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGK 91 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (263)
.|.+||=..|+.| |+.+...-...+..|++.+.+..++..+...++..+.+...+..+-...... ...+.
T Consensus 102 ~g~~vLD~CAaPG-gKt~~la~l~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~~~~~~~---------~~~~~ 171 (284)
T d1sqga2 102 NGEHILDLCAAPG-GKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQW---------CGEQQ 171 (284)
T ss_dssp TTCEEEEESCTTC-HHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHH---------HTTCC
T ss_pred ccceeEeccCccc-cchhhhhhhhhhhhhhhhhcchhhhhhHhhhhhcccccceeeeccccccchh---------ccccc
Confidence 4678887777777 6655432122235799999999999999998888777655554443322111 01246
Q ss_pred ccEEEeCCCCCCCCCCCCCCHHHH---HHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcc
Q 024752 92 LNILINNAGTFIPKETTEFTEEDF---STVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISS 150 (263)
Q Consensus 92 id~li~~ag~~~~~~~~~~~~~~~---~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS 150 (263)
+|.|+.-|.=+..+.+...+.-.| .+.+.-...-...+++++++.++. +|++||.+-
T Consensus 172 fd~IL~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~--gG~lvYsTC 231 (284)
T d1sqga2 172 FDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKT--GGTLVYATC 231 (284)
T ss_dssp EEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEE--EEEEEEEES
T ss_pred ccEEEEeccccccCccccccchhhccccchhhHHHHHHHHHHHHHHHhcCC--CceEEEeee
Confidence 898877664333332211111000 111222333356677777777655 688888763
|
| >d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Arsenite-translocating ATPase ArsA species: Escherichia coli [TaxId: 562]
Probab=87.71 E-value=0.26 Score=38.02 Aligned_cols=38 Identities=21% Similarity=0.284 Sum_probs=32.2
Q ss_pred CCCCEEEEecCCCchHHHH-----HHHHHHCCCeEEEeeCCch
Q 024752 11 LKGMTALVTGGTKGIGYAV-----VEELAAFGAIVHTCSRNET 48 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~-----a~~l~~~g~~V~~~~r~~~ 48 (263)
-.+++++|+.|=||.|+.. |..|+++|.+|.+++-++.
T Consensus 17 ~~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~ 59 (279)
T d1ihua2 17 RNEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA 59 (279)
T ss_dssp TTSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred cCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 4577788887799999875 7889999999999999975
|
| >d1wbha1 c.1.10.1 (A:1-213) KDPG aldolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Aldolase family: Class I aldolase domain: KDPG aldolase species: Escherichia coli [TaxId: 562]
Probab=87.66 E-value=1.5 Score=32.49 Aligned_cols=82 Identities=12% Similarity=0.056 Sum_probs=57.0
Q ss_pred CcccccccCCC--CCCE-EEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHH
Q 024752 1 MSDFREQRWSL--KGMT-ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQR 77 (263)
Q Consensus 1 ~~~~~~~~~~~--~~k~-vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 77 (263)
|.+++....++ ++++ .+|++-+---...+++.|.+.|.+++=+.-+.+...+..+.+.+...++..=..-+.+.+++
T Consensus 1 m~~~~~~~~~~l~~~~iipvlr~~~~~~a~~~~~al~~~Gi~~iEitl~tp~a~~~I~~l~~~~p~~~vGaGTV~~~~~~ 80 (213)
T d1wbha1 1 MKNWKTSAESILTTGPVVPVIVVKKLEHAVPMAKALVAGGVRVLNVTLRTECAVDAIRAIAKEVPEAIVGAGTVLNPQQL 80 (213)
T ss_dssp CCCCSSCHHHHHHSCSEEEEECCSSGGGHHHHHHHHHHTTCCEEEEESCSTTHHHHHHHHHHHCTTSEEEEESCCSHHHH
T ss_pred CCCcccCHHHHHHhCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHHCCCCeeeccccccHHHH
Confidence 45554433332 3455 47888888899999999999999866655555555666666665444566657788999999
Q ss_pred HHHHH
Q 024752 78 EKLME 82 (263)
Q Consensus 78 ~~~~~ 82 (263)
+++.+
T Consensus 81 ~~a~~ 85 (213)
T d1wbha1 81 AEVTE 85 (213)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88876
|
| >d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N5-glutamine methyltransferase, HemK domain: N5-glutamine methyltransferase, HemK species: Escherichia coli [TaxId: 562]
Probab=87.57 E-value=1 Score=34.82 Aligned_cols=78 Identities=10% Similarity=0.036 Sum_probs=54.6
Q ss_pred CCEEEEecCC-CchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCC-ceEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024752 13 GMTALVTGGT-KGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGL-QVSGSVCDLKIRAQREKLMETVSSQFDG 90 (263)
Q Consensus 13 ~k~vlVtGas-~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (263)
+..++=.|++ |.||.+++..+ ..+.|++++.++..++-..+..+..+. ++.+++.|+.+.- .+.
T Consensus 109 ~~~vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~~~~v~~~~~d~~~~~------------~~~ 174 (274)
T d2b3ta1 109 PCRILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSAL------------AGQ 174 (274)
T ss_dssp CCEEEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGG------------TTC
T ss_pred ccceeeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhCcccceeeeccccccc------------CCC
Confidence 4455555554 55666666543 357999999999988877776665554 5899999986431 125
Q ss_pred CccEEEeCCCCCCC
Q 024752 91 KLNILINNAGTFIP 104 (263)
Q Consensus 91 ~id~li~~ag~~~~ 104 (263)
++|++|.|..+...
T Consensus 175 ~fDlIvsNPPYi~~ 188 (274)
T d2b3ta1 175 QFAMIVSNPPYIDE 188 (274)
T ss_dssp CEEEEEECCCCBCT
T ss_pred ceeEEEecchhhhh
Confidence 89999999887643
|
| >d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Tandem AAA-ATPase domain domain: Nucleotide excision repair enzyme UvrB species: Thermus thermophilus [TaxId: 274]
Probab=87.52 E-value=3.4 Score=29.33 Aligned_cols=65 Identities=14% Similarity=0.060 Sum_probs=51.3
Q ss_pred HHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCccEEEeCCCC
Q 024752 33 LAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAGT 101 (263)
Q Consensus 33 l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~li~~ag~ 101 (263)
..+.|.++++++.+....+.+...+.+.|.++..+..++.+.+ -.++++..++ |++++||+.--.
T Consensus 27 ~~~~g~r~lvfc~t~~~~~~l~~~L~~~Gi~a~~~Hg~~~~~e-R~~~l~~F~~---G~~~vLVaT~v~ 91 (174)
T d1c4oa2 27 RAARGERTLVTVLTVRMAEELTSFLVEHGIRARYLHHELDAFK-RQALIRDLRL---GHYDCLVGINLL 91 (174)
T ss_dssp HHHTTCEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTCCHHH-HHHHHHHHHT---TSCSEEEESCCC
T ss_pred HHhcCCcEEEEEcchhHHHHHHHHHHhcCCceEEEecccchHH-HHHHHHHHHC---CCeEEEEeeeee
Confidence 3456889999999999999999999999999999999988543 3444444443 789999987543
|
| >d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: BC2162-like domain: Methyltransferase BC2162 species: Bacillus cereus [TaxId: 1396]
Probab=87.31 E-value=0.69 Score=35.77 Aligned_cols=76 Identities=17% Similarity=0.035 Sum_probs=55.4
Q ss_pred CCCEEEEecCCCchHHHHHHHHHH---CCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhc
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAA---FGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQF 88 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (263)
+.++||=.|++.| .++..|++ .|++|+.++.++..++...+.....+.++.+...|+.+.. +
T Consensus 27 ~~~~ILDiGcG~G---~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d~~~~~------------~ 91 (281)
T d2gh1a1 27 KPVHIVDYGCGYG---YLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIE------------L 91 (281)
T ss_dssp SCCEEEEETCTTT---HHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESCTTTCC------------C
T ss_pred CcCEEEEecCcCC---HHHHHHHHhCCCCCEEEEEecchhHhhhhhccccccccccccccccccccc------------c
Confidence 4578888888776 33344443 4789999999999888887777776778888888987531 1
Q ss_pred CCCccEEEeCCCCC
Q 024752 89 DGKLNILINNAGTF 102 (263)
Q Consensus 89 ~~~id~li~~ag~~ 102 (263)
.++.|+++++....
T Consensus 92 ~~~fD~v~~~~~l~ 105 (281)
T d2gh1a1 92 NDKYDIAICHAFLL 105 (281)
T ss_dssp SSCEEEEEEESCGG
T ss_pred cCCceEEEEehhhh
Confidence 25689999887654
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=87.04 E-value=0.54 Score=31.98 Aligned_cols=36 Identities=17% Similarity=0.076 Sum_probs=30.7
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCch
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET 48 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~ 48 (263)
++|+++|.| +|.+|..+|..|++.|.+|.++.+.+.
T Consensus 34 ~~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~~ 69 (133)
T d1q1ra2 34 ADNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAAR 69 (133)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCEEEEEC-CchHHHHHHHHHHhhCcceeeeeeccc
Confidence 467888886 578999999999999999999998654
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=87.00 E-value=0.68 Score=30.84 Aligned_cols=35 Identities=29% Similarity=0.346 Sum_probs=29.4
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCch
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET 48 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~ 48 (263)
+|.++|.|| |.+|..+|..|++.|.+|.++.|.+.
T Consensus 32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~ 66 (122)
T d1xhca2 32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAM 66 (122)
T ss_dssp HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred CCcEEEECC-cHHHHHHHHHhhcccceEEEEecccc
Confidence 367777664 78999999999999999999998753
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=86.91 E-value=1.9 Score=28.96 Aligned_cols=77 Identities=13% Similarity=0.058 Sum_probs=50.7
Q ss_pred CCCEEEEecCCC----------chHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHH
Q 024752 12 KGMTALVTGGTK----------GIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLM 81 (263)
Q Consensus 12 ~~k~vlVtGas~----------giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 81 (263)
.-|+|||.|+.. --+.+.++.|.+.|++++++..|++...--. ....++.+.+. ..+++.+++
T Consensus 6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~----d~aD~lYfePl---t~e~v~~Ii 78 (127)
T d1a9xa3 6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDP----EMADATYIEPI---HWEVVRKII 78 (127)
T ss_dssp SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCG----GGSSEEECSCC---CHHHHHHHH
T ss_pred CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcCh----hhcceeeeecC---CHHHHHHHH
Confidence 458899998864 2367888999999999999999987532111 11223333222 355666665
Q ss_pred HHHHhhcCCCccEEEeCCCC
Q 024752 82 ETVSSQFDGKLNILINNAGT 101 (263)
Q Consensus 82 ~~~~~~~~~~id~li~~ag~ 101 (263)
+. .++|.++...|.
T Consensus 79 ~~------E~pd~il~~~GG 92 (127)
T d1a9xa3 79 EK------ERPDAVLPTMGG 92 (127)
T ss_dssp HH------HCCSEEECSSSH
T ss_pred HH------hCcCCeEEEeee
Confidence 53 579999888774
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=86.81 E-value=1.4 Score=28.96 Aligned_cols=34 Identities=26% Similarity=0.349 Sum_probs=26.9
Q ss_pred CCEEEEecCCCchHHHHHHHHHHC---CCeEEEeeCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAF---GAIVHTCSRNE 47 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~---g~~V~~~~r~~ 47 (263)
.|.++|.|| |.+|..+|..|.+. |.+|.++.|.+
T Consensus 20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~ 56 (117)
T d1aoga2 20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE 56 (117)
T ss_dssp CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence 578888887 89999999776655 45798888754
|
| >d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: SGNH hydrolase family: YxiM C-terminal domain-like domain: Hypothetical protein YxiM species: Bacillus subtilis [TaxId: 1423]
Probab=86.66 E-value=2.2 Score=30.61 Aligned_cols=107 Identities=13% Similarity=0.136 Sum_probs=57.9
Q ss_pred CCCCEEEEecCCC-------------chHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHH
Q 024752 11 LKGMTALVTGGTK-------------GIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQR 77 (263)
Q Consensus 11 ~~~k~vlVtGas~-------------giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 77 (263)
+++|++++.|=|- |-+..+++.|-..+.+|+-.+..-........+
T Consensus 1 ~~~~ti~~~GDS~~~g~~~~~~~~~~Gw~~~L~~~l~~~~~~v~N~gi~G~t~~~~~~~--------------------- 59 (208)
T d2o14a2 1 VTNRTIYVGGDSTVCNYYPLNSSKQAGWGQMLPHYIDKHTFQVRNMASGGQIARGFRND--------------------- 59 (208)
T ss_dssp CCCCEEEEEECTTTSCCSSTTTCSBCCHHHHGGGTSCTTTCEEEECCCTTCCHHHHHHS---------------------
T ss_pred CCCCEEEEEEcccccCcCCCCCCCCCCHHHHHHHHhCCCceEEEeCeechhhhccHhhh---------------------
Confidence 4689999999883 344555655655677776666655433222111
Q ss_pred HHHHHHHHhhcCCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHhhhHhHHHHHHHHhHHHhhCCCceEEEEcccc
Q 024752 78 EKLMETVSSQFDGKLNILINNAGTFIPKETTEFTEEDFSTVMTTNFESAYHLSQLAHPLLKSAGNGNIIFISSVA 152 (263)
Q Consensus 78 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~ 152 (263)
..+.++.... .+.|++|...|..........+.+.+.+.+ +.++..+++. +.++|+++...
T Consensus 60 -~~~~~~~~~~-~~~D~vvi~~G~ND~~~~~~~~~~~~~~~l-----------~~li~~~~~~-~~~~vl~~~~~ 120 (208)
T d2o14a2 60 -GQLEAILKYI-KPGDYFMLQLGINDTNPKHKESEAEFKEVM-----------RDMIRQVKAK-GADVILSTPQG 120 (208)
T ss_dssp -SHHHHHHTTC-CTTCEEEEECCTGGGCGGGCCCHHHHHHHH-----------HHHHHHHHTT-TCEEEEECCCC
T ss_pred -hhHHHHHHhc-CCCCEEEEEcCCCcccccccccHHHHHHHH-----------HHHHHHHHhc-CCceeeccccc
Confidence 1122333333 467999999887654332333555443322 2233333433 46777776544
|
| >d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Arginine methyltransferase, HMT1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=86.50 E-value=1.7 Score=34.15 Aligned_cols=75 Identities=17% Similarity=0.033 Sum_probs=51.6
Q ss_pred CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhc--CCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 11 LKGMTALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSK--GLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 11 ~~~k~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
.+||+||-.|++.|+ ++..++++|+ +|++++.++ .++...+..... ..++.++..|+.+.. .
T Consensus 37 ~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l~-----------~ 101 (328)
T d1g6q1_ 37 FKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVH-----------L 101 (328)
T ss_dssp HTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC-----------C
T ss_pred CCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhcc-----------C
Confidence 589999999999884 4566788897 699999875 343333333333 456888888887531 0
Q ss_pred cCCCccEEEeCCC
Q 024752 88 FDGKLNILINNAG 100 (263)
Q Consensus 88 ~~~~id~li~~ag 100 (263)
-..++|+++...-
T Consensus 102 ~~~~~D~i~se~~ 114 (328)
T d1g6q1_ 102 PFPKVDIIISEWM 114 (328)
T ss_dssp SSSCEEEEEECCC
T ss_pred cccceeEEEEEec
Confidence 1257999988643
|
| >d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=86.40 E-value=1.2 Score=33.13 Aligned_cols=80 Identities=13% Similarity=0.022 Sum_probs=56.6
Q ss_pred CCCEEEEecCCCchHHHHHHHHHH-CC----CeEEEeeCCchhHHHHHHHHHhc------CCceEEEeccCCCHHHHHHH
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAA-FG----AIVHTCSRNETELNQRIQEWKSK------GLQVSGSVCDLKIRAQREKL 80 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~-~g----~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~ 80 (263)
++.+||..|+++|--.++.-+++. .| .+|+.+.++++-.+...+.+... -.++.+...|..+.
T Consensus 80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~------ 153 (223)
T d1r18a_ 80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKG------ 153 (223)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGC------
T ss_pred CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEecccccc------
Confidence 478999999999988888888764 44 48999999987766554443221 23578888887531
Q ss_pred HHHHHhhcCCCccEEEeCCCCC
Q 024752 81 METVSSQFDGKLNILINNAGTF 102 (263)
Q Consensus 81 ~~~~~~~~~~~id~li~~ag~~ 102 (263)
.. . .++.|.++.+++..
T Consensus 154 ---~~-~-~~~fD~Iiv~~a~~ 170 (223)
T d1r18a_ 154 ---YP-P-NAPYNAIHVGAAAP 170 (223)
T ss_dssp ---CG-G-GCSEEEEEECSCBS
T ss_pred ---cc-c-ccceeeEEEEeech
Confidence 01 1 15799999988864
|
| >d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein BH2331 species: Bacillus halodurans [TaxId: 86665]
Probab=86.32 E-value=1.5 Score=32.14 Aligned_cols=80 Identities=19% Similarity=0.119 Sum_probs=57.0
Q ss_pred CCC-CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcC-CceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 10 SLK-GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG-LQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 10 ~~~-~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
.++ +++||=.||+.|.- +..|++.|++|+.++-++..++...+.+...+ .++.++..|..+.. + .
T Consensus 12 ~l~~~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~-----~-----~ 78 (231)
T d1vl5a_ 12 ALKGNEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP-----F-----T 78 (231)
T ss_dssp TCCSCCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC-----S-----C
T ss_pred CCCCcCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhccccccccccccccccccccc-----c-----c
Confidence 344 58899999988843 45678889999999999988777665555443 46888888876531 0 0
Q ss_pred cCCCccEEEeCCCCCC
Q 024752 88 FDGKLNILINNAGTFI 103 (263)
Q Consensus 88 ~~~~id~li~~ag~~~ 103 (263)
.+..|+++++..+.+
T Consensus 79 -~~~fD~v~~~~~l~~ 93 (231)
T d1vl5a_ 79 -DERFHIVTCRIAAHH 93 (231)
T ss_dssp -TTCEEEEEEESCGGG
T ss_pred -ccccccccccccccc
Confidence 257999998877643
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=86.28 E-value=0.28 Score=36.23 Aligned_cols=31 Identities=19% Similarity=0.158 Sum_probs=26.3
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEeeCCc
Q 024752 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE 47 (263)
Q Consensus 16 vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~ 47 (263)
|+|.| +|--|..+|..|+++|.+|.++.++.
T Consensus 8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~ 38 (297)
T d2bcgg1 8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQD 38 (297)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 66777 45559999999999999999999875
|
| >d1ccwa_ c.23.6.1 (A:) Glutamate mutase, small subunit {Clostridium cochlearium [TaxId: 1494]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Cobalamin (vitamin B12)-binding domain family: Cobalamin (vitamin B12)-binding domain domain: Glutamate mutase, small subunit species: Clostridium cochlearium [TaxId: 1494]
Probab=86.25 E-value=3.2 Score=28.15 Aligned_cols=88 Identities=10% Similarity=-0.035 Sum_probs=56.6
Q ss_pred CCCCEEEEecC---CCchHHHHHHHHH-HCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCC-CHHHHHHHHHHHH
Q 024752 11 LKGMTALVTGG---TKGIGYAVVEELA-AFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLK-IRAQREKLMETVS 85 (263)
Q Consensus 11 ~~~k~vlVtGa---s~giG~~~a~~l~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~ 85 (263)
++.++|+++-. ...+|..++..+. ..|++|+-.+.+.. .+++.+.+.+.+.++..+..=++ ....+.++++.++
T Consensus 1 ~~k~kVvi~~~~gD~H~lG~~mva~~l~~~G~~V~~LG~~~p-~e~iv~a~~~~~~d~v~lS~~~~~~~~~~~~~~~~l~ 79 (137)
T d1ccwa_ 1 MEKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSP-QELFIKAAIETKADAILVSSLYGQGEIDCKGLRQKCD 79 (137)
T ss_dssp CCCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEEC-HHHHHHHHHHHTCSEEEEEECSSTHHHHHTTHHHHHH
T ss_pred CCCCEEEEEecCCChhHHHHHHHHHHHHHCCCeEEecccccC-HHHHHHHHHhcCCCEEEEeeccccchHHHHHHHHHHH
Confidence 35567776533 3589999988865 67999998876543 34555555555677777765444 4566777778877
Q ss_pred hhcCCCccEEEeCCCC
Q 024752 86 SQFDGKLNILINNAGT 101 (263)
Q Consensus 86 ~~~~~~id~li~~ag~ 101 (263)
+.. .-|+.|..-|.
T Consensus 80 ~~~--~~~i~iivGG~ 93 (137)
T d1ccwa_ 80 EAG--LEGILLYVGGN 93 (137)
T ss_dssp HTT--CTTCEEEEEES
T ss_pred Hhc--cCCCEEEEeCC
Confidence 653 33555554443
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=86.12 E-value=0.44 Score=34.68 Aligned_cols=38 Identities=13% Similarity=0.115 Sum_probs=30.3
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHH
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRI 54 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~ 54 (263)
++.|.| .|.+|+.+|..|+ .|++|+.+|.+++..+++.
T Consensus 2 kI~ViG-lG~vGl~~a~~~a-~g~~V~g~Din~~~v~~l~ 39 (196)
T d1dlja2 2 KIAVAG-SGYVGLSLGVLLS-LQNEVTIVDILPSKVDKIN 39 (196)
T ss_dssp EEEEEC-CSHHHHHHHHHHT-TTSEEEEECSCHHHHHHHH
T ss_pred EEEEEC-CChhHHHHHHHHH-CCCcEEEEECCHHHHHHHh
Confidence 355665 7999999998775 6999999999988766553
|
| >d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Cell division regulator MinD species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=85.85 E-value=0.36 Score=35.88 Aligned_cols=34 Identities=21% Similarity=0.279 Sum_probs=29.5
Q ss_pred CCEEEEecCCCchHH-----HHHHHHHHCCCeEEEeeCC
Q 024752 13 GMTALVTGGTKGIGY-----AVVEELAAFGAIVHTCSRN 46 (263)
Q Consensus 13 ~k~vlVtGas~giG~-----~~a~~l~~~g~~V~~~~r~ 46 (263)
+|++.|+|+-||.|+ ++|..|+++|.+|.+++-+
T Consensus 2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D 40 (237)
T d1g3qa_ 2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD 40 (237)
T ss_dssp CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 689999999999987 5677888999999999865
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=85.40 E-value=2.8 Score=27.86 Aligned_cols=76 Identities=12% Similarity=-0.009 Sum_probs=49.0
Q ss_pred CCEEEEecCCC----------chHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHH
Q 024752 13 GMTALVTGGTK----------GIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLME 82 (263)
Q Consensus 13 ~k~vlVtGas~----------giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 82 (263)
.|.+||.|+.. --+.+.++.|.+.|++++++..|++...--. ....++.+-+ + ..+.+.++++
T Consensus 4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~----d~aD~lYfep--l-t~e~v~~Ii~ 76 (121)
T d1a9xa4 4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDY----DTSDRLYFEP--V-TLEDVLEIVR 76 (121)
T ss_dssp SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTST----TSSSEEECCC--C-SHHHHHHHHH
T ss_pred CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcCh----hhcCceEEcc--C-CHHHHHHHHH
Confidence 57899999864 3367889999999999999999987532100 0112233222 2 3455555554
Q ss_pred HHHhhcCCCccEEEeCCCC
Q 024752 83 TVSSQFDGKLNILINNAGT 101 (263)
Q Consensus 83 ~~~~~~~~~id~li~~ag~ 101 (263)
. .++|.++...|.
T Consensus 77 ~------E~p~~ii~~~GG 89 (121)
T d1a9xa4 77 I------EKPKGVIVQYGG 89 (121)
T ss_dssp H------HCCSEEECSSST
T ss_pred H------hCCCEEEeehhh
Confidence 3 478999888774
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=85.34 E-value=0.44 Score=33.49 Aligned_cols=35 Identities=20% Similarity=0.196 Sum_probs=29.0
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCC--eEEEeeCCc
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGA--IVHTCSRNE 47 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~--~V~~~~r~~ 47 (263)
.||+|+|.||+ ..|..+|..|.+.+. +|+++.+++
T Consensus 1 ~gkrivIvGgG-~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 1 AGRKVVVVGGG-TGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCCEEEEECCS-HHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCCcEEEECcc-HHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 38999999975 459999999999885 788888765
|
| >d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Glycine N-methyltransferase domain: Glycine N-methyltransferase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=85.26 E-value=0.31 Score=38.02 Aligned_cols=46 Identities=15% Similarity=0.097 Sum_probs=36.4
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhc
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSK 60 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~ 60 (263)
.+++||=.|++.|. ++..|+++|++|+.++.++.-++...+.....
T Consensus 56 ~~~~vLD~GcG~G~---~~~~la~~g~~v~gvD~S~~ml~~A~~~~~~~ 101 (292)
T d1xvaa_ 56 GCHRVLDVACGTGV---DSIMLVEEGFSVTSVDASDKMLKYALKERWNR 101 (292)
T ss_dssp TCCEEEESSCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT
T ss_pred CCCEEEEecCCCcH---HHHHHHHcCCeeeeccCchHHHHHHHHHHHhc
Confidence 36789999998885 46677889999999999999887766555443
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=85.04 E-value=0.34 Score=36.92 Aligned_cols=31 Identities=29% Similarity=0.219 Sum_probs=26.7
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEeeCCc
Q 024752 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE 47 (263)
Q Consensus 16 vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~ 47 (263)
|+|.|| |-.|.++|..|+++|.+|+++.++.
T Consensus 7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~ 37 (276)
T d1ryia1 7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT 37 (276)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 666664 6679999999999999999999975
|
| >d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Succinyl-CoA synthetase domains family: Succinyl-CoA synthetase domains domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=84.97 E-value=4.5 Score=27.97 Aligned_cols=83 Identities=13% Similarity=0.149 Sum_probs=52.6
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccC---CCHHHHHHHHHHHHhhc
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDL---KIRAQREKLMETVSSQF 88 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~ 88 (263)
+|+++.|.+.+||.|--++-.+.+.|.++.- -+++..+++.+.+.. .....-+.|+ .+.+...++++.+.+.
T Consensus 2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~--l~~~t~~~L~~~lp~--~~~~~NPlD~~~~~~~~~~~~~l~~~~~d- 76 (163)
T d2csua3 2 RGNKVAIMTNAGGPGVLTADELDKRGLKLAT--LEEKTIEELRSFLPP--MAAVKNPVDMIASARGEDYYRTAKLLLQD- 76 (163)
T ss_dssp SSSEEEEEESCHHHHHHHHHHHHTTTCEECC--CCHHHHHHHHHHSCT--TCEESSEEECCTTCCHHHHHHHHHHHHHS-
T ss_pred CCCeEEEEECChHHHHHHHHHHHHcCCccCC--CCHHHHHHHHHhCCC--cccCCCcccccCCCCHHHHHHHHHHHHcC-
Confidence 7899999999999999999999999966543 233333333322211 1111123444 3567777777777664
Q ss_pred CCCccEEEeCCC
Q 024752 89 DGKLNILINNAG 100 (263)
Q Consensus 89 ~~~id~li~~ag 100 (263)
+.+|.++....
T Consensus 77 -~~vd~v~v~~~ 87 (163)
T d2csua3 77 -PNVDMLIAICV 87 (163)
T ss_dssp -TTCSEEEEEEE
T ss_pred -CCcCEEEEeec
Confidence 67888765443
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=84.73 E-value=4.7 Score=28.01 Aligned_cols=74 Identities=12% Similarity=-0.074 Sum_probs=39.7
Q ss_pred EEEEecCCCchHHHHHHH-HHHC-----CCeEEEeeCCchhHHHHHHHHHhc-CCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 15 TALVTGGTKGIGYAVVEE-LAAF-----GAIVHTCSRNETELNQRIQEWKSK-GLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~-l~~~-----g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
++.|.||++ +|..++-. +++. ...++++|.++++++......... ...... ... ++. .+.+
T Consensus 2 KIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~-~~t-~~~---~~~l------ 69 (162)
T d1up7a1 2 RIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKV-LIS-DTF---EGAV------ 69 (162)
T ss_dssp EEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEE-EEC-SSH---HHHH------
T ss_pred EEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceE-EEe-cCc---cccc------
Confidence 467778754 55555433 3321 347999999998877543322221 111111 111 221 1222
Q ss_pred cCCCccEEEeCCCCC
Q 024752 88 FDGKLNILINNAGTF 102 (263)
Q Consensus 88 ~~~~id~li~~ag~~ 102 (263)
..-|++|..||..
T Consensus 70 --~~aDvVVita~~~ 82 (162)
T d1up7a1 70 --VDAKYVIFQFRPG 82 (162)
T ss_dssp --TTCSEEEECCCTT
T ss_pred --CCCCEEEEecccC
Confidence 3569999999874
|
| >d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Cell division regulator MinD species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=84.69 E-value=0.36 Score=35.81 Aligned_cols=34 Identities=26% Similarity=0.272 Sum_probs=29.2
Q ss_pred CEEEEecCCCchHH-----HHHHHHHHCCCeEEEeeCCc
Q 024752 14 MTALVTGGTKGIGY-----AVVEELAAFGAIVHTCSRNE 47 (263)
Q Consensus 14 k~vlVtGas~giG~-----~~a~~l~~~g~~V~~~~r~~ 47 (263)
|++.|+++-||.|+ ++|..|+++|.+|.+++-+.
T Consensus 2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~ 40 (232)
T d1hyqa_ 2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI 40 (232)
T ss_dssp EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 78999999999886 56778999999999998764
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.34 E-value=0.49 Score=36.68 Aligned_cols=34 Identities=24% Similarity=0.337 Sum_probs=27.7
Q ss_pred CCCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCC
Q 024752 12 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRN 46 (263)
Q Consensus 12 ~~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~ 46 (263)
+.++|+|.||+=+ |+..|..|+++|++|.++-++
T Consensus 4 ~~~kViVIGaG~a-GL~aA~~L~~~G~~V~VlEa~ 37 (449)
T d2dw4a2 4 KTGKVIIIGSGVS-GLAAARQLQSFGMDVTLLEAR 37 (449)
T ss_dssp CCCEEEEECCBHH-HHHHHHHHHHTTCEEEEECSS
T ss_pred CCCcEEEECCCHH-HHHHHHHHHhCCCCEEEEeCC
Confidence 4566888887654 999999999999999887654
|
| >d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: CheY-like family: CheY-related domain: Sporulation response regulator Spo0F species: Bacillus subtilis [TaxId: 1423]
Probab=83.76 E-value=2.6 Score=27.64 Aligned_cols=81 Identities=10% Similarity=0.047 Sum_probs=52.1
Q ss_pred CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCc
Q 024752 13 GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKL 92 (263)
Q Consensus 13 ~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 92 (263)
+|+|||.--...+-..+.+.|.+.|++|.......+.. +.+.+....+..+-..+-+.+ -.++++++++.. ..+
T Consensus 1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~~g~eal----~~~~~~~~dlillD~~mP~~~-G~el~~~lr~~~-~~~ 74 (119)
T d1peya_ 1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAANGLQAL----DIVTKERPDLVLLDMKIPGMD-GIEILKRMKVID-ENI 74 (119)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHH----HHHHHHCCSEEEEESCCTTCC-HHHHHHHHHHHC-TTC
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeCCHHHHH----HHHHhCCCCEEEEeccCCCCC-HHHHHHHHHHhC-CCC
Confidence 58899999999999999999999999988655433333 233333334444333333443 346677777765 456
Q ss_pred cEEEeCC
Q 024752 93 NILINNA 99 (263)
Q Consensus 93 d~li~~a 99 (263)
-+++..+
T Consensus 75 pvi~lt~ 81 (119)
T d1peya_ 75 RVIIMTA 81 (119)
T ss_dssp EEEEEES
T ss_pred cEEEEec
Confidence 6666554
|
| >d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=83.65 E-value=1.4 Score=32.32 Aligned_cols=81 Identities=10% Similarity=0.191 Sum_probs=53.5
Q ss_pred CCCC-CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 9 WSLK-GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 9 ~~~~-~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
++++ |.+||=.||+.|.-......+...| +|++++.++..++.+.+..+.. .++.++..|..++......
T Consensus 52 l~lkpg~~VLDlGcG~G~~~~~la~~v~~g-~V~gvDis~~~i~~a~~~a~~~-~ni~~i~~d~~~~~~~~~~------- 122 (209)
T d1nt2a_ 52 LKLRGDERVLYLGAASGTTVSHLADIVDEG-IIYAVEYSAKPFEKLLELVRER-NNIIPLLFDASKPWKYSGI------- 122 (209)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTTTS-EEEEECCCHHHHHHHHHHHHHC-SSEEEECSCTTCGGGTTTT-------
T ss_pred CCCCCCCEEEEeCCcCCHHHHHHHHhccCC-eEEEEeCCHHHHHHHHHHhhcc-CCceEEEeeccCccccccc-------
Confidence 4444 7889988988875333333333334 8999999999888877666543 4688888888875442221
Q ss_pred cCCCccEEEeCC
Q 024752 88 FDGKLNILINNA 99 (263)
Q Consensus 88 ~~~~id~li~~a 99 (263)
+ ..+|++++..
T Consensus 123 ~-~~vd~v~~~~ 133 (209)
T d1nt2a_ 123 V-EKVDLIYQDI 133 (209)
T ss_dssp C-CCEEEEEECC
T ss_pred c-ceEEEEEecc
Confidence 1 4677777653
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=83.62 E-value=0.52 Score=33.43 Aligned_cols=84 Identities=12% Similarity=0.188 Sum_probs=52.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHC-CCeEE-EeeCCchh-HHHHHHH--------------HHhcCCceEEEeccCCCHHH
Q 024752 14 MTALVTGGTKGIGYAVVEELAAF-GAIVH-TCSRNETE-LNQRIQE--------------WKSKGLQVSGSVCDLKIRAQ 76 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~-g~~V~-~~~r~~~~-~~~~~~~--------------~~~~~~~~~~~~~D~~~~~~ 76 (263)
-++.|.|++|-+|+++++...+. ++.++ .++|.... ......+ +...-..+. +..|+|.++.
T Consensus 5 ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~D-ViIDFs~p~~ 83 (162)
T d1diha1 5 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFD-VFIDFTRPEG 83 (162)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCS-EEEECSCHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccc-eEEEeccHHH
Confidence 46899999999999999998875 55543 34443211 0000000 000001111 4479999999
Q ss_pred HHHHHHHHHhhcCCCccEEEeCCCC
Q 024752 77 REKLMETVSSQFDGKLNILINNAGT 101 (263)
Q Consensus 77 ~~~~~~~~~~~~~~~id~li~~ag~ 101 (263)
....++.+.+. ++.+|+-..|.
T Consensus 84 ~~~~~~~a~~~---~~~~ViGTTG~ 105 (162)
T d1diha1 84 TLNHLAFCRQH---GKGMVIGTTGF 105 (162)
T ss_dssp HHHHHHHHHHT---TCEEEECCCCC
T ss_pred HHHHHHHHHhc---cceeEEecCCC
Confidence 99999877764 57888877775
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=83.18 E-value=0.85 Score=31.52 Aligned_cols=33 Identities=24% Similarity=0.274 Sum_probs=26.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC---eEEEeeCC
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGA---IVHTCSRN 46 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~---~V~~~~r~ 46 (263)
.+|.|.||||-.|+.+.+.|.++++ ++..++.+
T Consensus 3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~ 38 (144)
T d2hjsa1 3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASA 38 (144)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECT
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeec
Confidence 5689999999999999999987654 56555444
|
| >d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermus thermophilus [TaxId: 274]
Probab=82.26 E-value=2.2 Score=30.53 Aligned_cols=73 Identities=7% Similarity=0.024 Sum_probs=47.3
Q ss_pred CCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHhhcCCCccEEEeCCC
Q 024752 21 GTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGSVCDLKIRAQREKLMETVSSQFDGKLNILINNAG 100 (263)
Q Consensus 21 as~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~li~~ag 100 (263)
||-|-|-+ .+.+++.+.+|++++|+++..+.... . ...++.++..+.++.+. .+.... .+++|.++..-|
T Consensus 25 ~T~G~GGh-s~~iL~~~~~viaiD~D~~ai~~a~~-~--~~~~~~~~~~~f~~~~~---~l~~~~---~~~vdgIl~DLG 94 (182)
T d1wg8a2 25 ATLGGAGH-ARGILERGGRVIGLDQDPEAVARAKG-L--HLPGLTVVQGNFRHLKR---HLAALG---VERVDGILADLG 94 (182)
T ss_dssp TTCTTSHH-HHHHHHTTCEEEEEESCHHHHHHHHH-T--CCTTEEEEESCGGGHHH---HHHHTT---CSCEEEEEEECS
T ss_pred eCCCCcHH-HHHHhcccCcEEEEhhhhhHHHHHhh-c--cccceeEeehHHHHHHH---HHHHcC---CCccCEEEEEcc
Confidence 44444545 44556667799999999987655432 2 33468888888876433 333221 257999999999
Q ss_pred CCC
Q 024752 101 TFI 103 (263)
Q Consensus 101 ~~~ 103 (263)
+..
T Consensus 95 vSs 97 (182)
T d1wg8a2 95 VSS 97 (182)
T ss_dssp CCH
T ss_pred CCH
Confidence 753
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=82.11 E-value=2.3 Score=33.40 Aligned_cols=32 Identities=22% Similarity=0.335 Sum_probs=23.6
Q ss_pred CEEEEecCCCc-h--HHHHHHHHHHCCCeEEEeeC
Q 024752 14 MTALVTGGTKG-I--GYAVVEELAAFGAIVHTCSR 45 (263)
Q Consensus 14 k~vlVtGas~g-i--G~~~a~~l~~~g~~V~~~~r 45 (263)
|+++.++||+| | -.++|++|+++|++|.+++.
T Consensus 2 ril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~ 36 (391)
T d1pn3a_ 2 RVLITGCGSRGDTEPLVALAARLRELGADARMCLP 36 (391)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEEC
Confidence 45555666643 2 56789999999999988874
|
| >d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Methylase YhhF species: Escherichia coli [TaxId: 562]
Probab=81.92 E-value=5.8 Score=28.04 Aligned_cols=77 Identities=10% Similarity=-0.021 Sum_probs=51.4
Q ss_pred CCCCEEEEecCC-CchHHHHHHHHHHCCC-eEEEeeCCchhHHHHHHHHHhc-CCceEEEeccCCCHHHHHHHHHHHHhh
Q 024752 11 LKGMTALVTGGT-KGIGYAVVEELAAFGA-IVHTCSRNETELNQRIQEWKSK-GLQVSGSVCDLKIRAQREKLMETVSSQ 87 (263)
Q Consensus 11 ~~~k~vlVtGas-~giG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (263)
++++++|=.+|+ |.+|. +.+++|+ .|+.++.+.+..+.+.+.+... ..++..+..|+. + .+...
T Consensus 42 ~~~~~vLDlfaGsG~~gi----ealsrGa~~v~~VE~~~~a~~~~k~N~~~~~~~~~~ii~~d~~------~---~l~~~ 108 (183)
T d2fpoa1 42 IVDAQCLDCFAGSGALGL----EALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAM------S---FLAQK 108 (183)
T ss_dssp HTTCEEEETTCTTCHHHH----HHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHH------H---HHSSC
T ss_pred cchhhhhhhhccccceee----eEEecCcceeEEEEEeechhhHHHHHHhhccccceeeeeeccc------c---ccccc
Confidence 677888754444 44454 4566888 6999999999988777777654 235667776632 2 22222
Q ss_pred cCCCccEEEeCCCC
Q 024752 88 FDGKLNILINNAGT 101 (263)
Q Consensus 88 ~~~~id~li~~ag~ 101 (263)
..+.|+++....+
T Consensus 109 -~~~fDlIf~DPPY 121 (183)
T d2fpoa1 109 -GTPHNIVFVDPPF 121 (183)
T ss_dssp -CCCEEEEEECCSS
T ss_pred -ccccCEEEEcCcc
Confidence 3678999998664
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=81.92 E-value=0.57 Score=35.58 Aligned_cols=32 Identities=25% Similarity=0.239 Sum_probs=27.1
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeeCCc
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNE 47 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~ 47 (263)
.|+|.|| |--|...|..|+++|++|.++.++.
T Consensus 2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~ 33 (347)
T d2ivda1 2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA 33 (347)
T ss_dssp CEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred eEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence 4788887 5559999999999999999998754
|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Flavoprotein BC4706 species: Bacillus cereus [TaxId: 1396]
Probab=81.79 E-value=0.56 Score=35.09 Aligned_cols=34 Identities=24% Similarity=0.165 Sum_probs=27.4
Q ss_pred EEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhH
Q 024752 16 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETEL 50 (263)
Q Consensus 16 vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~ 50 (263)
|+|.||. --|..+|..|+++|++|+++.++....
T Consensus 5 ViIIGaG-~aGl~aA~~la~~G~~V~liEk~~~~g 38 (251)
T d2i0za1 5 VIVIGGG-PSGLMAAIGAAEEGANVLLLDKGNKLG 38 (251)
T ss_dssp EEEECCS-HHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred EEEECcC-HHHHHHHHHHHHCCCcEEEEeCCCCCC
Confidence 5677765 458899999999999999999876543
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=81.58 E-value=1.1 Score=31.05 Aligned_cols=34 Identities=9% Similarity=-0.027 Sum_probs=25.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC-C---eEEEeeCCc
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFG-A---IVHTCSRNE 47 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g-~---~V~~~~r~~ 47 (263)
|+|-|.||||-.|+.+.+.|+++. + .+.+..++.
T Consensus 2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~ 39 (146)
T d1t4ba1 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ 39 (146)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS
T ss_pred cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccc
Confidence 468899999999999999877653 2 566666554
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=81.38 E-value=1.1 Score=30.36 Aligned_cols=89 Identities=17% Similarity=0.191 Sum_probs=53.8
Q ss_pred CCCCEEEEecCC---CchHHHHHHHHHHCC-CeEEEeeCCchhHH--HHHHHHHhcCCceEEEeccCCCHHHHHHHHHHH
Q 024752 11 LKGMTALVTGGT---KGIGYAVVEELAAFG-AIVHTCSRNETELN--QRIQEWKSKGLQVSGSVCDLKIRAQREKLMETV 84 (263)
Q Consensus 11 ~~~k~vlVtGas---~giG~~~a~~l~~~g-~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 84 (263)
++-|.|.|.|+| +..|..+.+.|.+.| .+|+.+..+.+... .....+.+....+..+ .=....+.+.++++++
T Consensus 6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~G~~~y~sl~dlp~~vDlv-vi~vp~~~~~~~~~~~ 84 (129)
T d2csua1 6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQGVKAYKSVKDIPDEIDLA-IIVVPKRFVKDTLIQC 84 (129)
T ss_dssp TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEETTEECBSSTTSCSSCCSEE-EECSCHHHHHHHHHHH
T ss_pred CCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccCCeEeecchhhcCCCCceE-EEecChHHhHHHHHHH
Confidence 456899999999 788999999987766 48988877654321 1111222211111111 1123477788888888
Q ss_pred HhhcCCCccEEEeCCCCC
Q 024752 85 SSQFDGKLNILINNAGTF 102 (263)
Q Consensus 85 ~~~~~~~id~li~~ag~~ 102 (263)
.+. +---+++..+|+.
T Consensus 85 ~~~--g~~~~vi~s~Gf~ 100 (129)
T d2csua1 85 GEK--GVKGVVIITAGFG 100 (129)
T ss_dssp HHH--TCCEEEECCCSST
T ss_pred HHc--CCCEEEEeccccc
Confidence 876 3334556666654
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=80.83 E-value=0.77 Score=35.46 Aligned_cols=32 Identities=16% Similarity=0.266 Sum_probs=26.2
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-eEEEeeCCc
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGA-IVHTCSRNE 47 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~-~V~~~~r~~ 47 (263)
.|+|.|| |-+|.++|.+|+++|. +|.+++|+.
T Consensus 3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~ 35 (305)
T d1pj5a2 3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP 35 (305)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 3666665 4789999999999997 699998874
|
| >d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose 6-phosphate dehydrogenase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.65 E-value=1.3 Score=32.44 Aligned_cols=89 Identities=9% Similarity=-0.004 Sum_probs=56.5
Q ss_pred CCCEEEEecCCCchHH-----HHHHHHHH----CCCeEEEeeCCchhHHHHHHHHHh--------------cCCceEEEe
Q 024752 12 KGMTALVTGGTKGIGY-----AVVEELAA----FGAIVHTCSRNETELNQRIQEWKS--------------KGLQVSGSV 68 (263)
Q Consensus 12 ~~k~vlVtGas~giG~-----~~a~~l~~----~g~~V~~~~r~~~~~~~~~~~~~~--------------~~~~~~~~~ 68 (263)
..-+++|.||+|-+-+ ++-..+.. .+.+|+.++|.+-..++..+.+.. .-.++.++.
T Consensus 19 ~~~t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s~e~fr~~~~~~~~~~~~~~~~~~~f~~~~~Y~~ 98 (203)
T d1qkia1 19 DTHIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVA 98 (203)
T ss_dssp CCEEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCSCHHHHHHHSCCTTCCGGGHHHHHHHHTTEECCB
T ss_pred CCcEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHhhcccc
Confidence 3457899999997754 33333332 245799999987555444433321 124588889
Q ss_pred ccCCCHHHHHHHHHHHHhhc-CCCccEEEeCCC
Q 024752 69 CDLKIRAQREKLMETVSSQF-DGKLNILINNAG 100 (263)
Q Consensus 69 ~D~~~~~~~~~~~~~~~~~~-~~~id~li~~ag 100 (263)
.|++++++..++-+.+.+.. +..-..+++.|=
T Consensus 99 ~d~~~~~~~~~L~~~l~~~~~~~~~~rifYLAv 131 (203)
T d1qkia1 99 GQYDDAASYQRLNSHMNALHLGSQANRLFYLAL 131 (203)
T ss_dssp CCTTCHHHHHHHHHHHHHTTTTTTSEEEEEECS
T ss_pred CcCCChhhHHHHHHHHHHHhcCCCcceEEEEec
Confidence 99999999988877766532 123345555543
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=80.55 E-value=0.73 Score=35.32 Aligned_cols=33 Identities=15% Similarity=0.089 Sum_probs=28.2
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCeEEEeeCCch
Q 024752 15 TALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET 48 (263)
Q Consensus 15 ~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~ 48 (263)
.|+|.||+ -.|+.+|..|++.|.+|.++.|.++
T Consensus 4 ~V~IvGaG-p~Gl~~A~~L~~~G~~v~vlE~~~~ 36 (292)
T d1k0ia1 4 QVAIIGAG-PSGLLLGQLLHKAGIDNVILERQTP 36 (292)
T ss_dssp SEEEECCS-HHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 46777876 5699999999999999999999764
|
| >d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein YcgJ species: Bacillus subtilis [TaxId: 1423]
Probab=80.33 E-value=3.2 Score=30.49 Aligned_cols=80 Identities=10% Similarity=0.035 Sum_probs=56.7
Q ss_pred CCCC-CCEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcC-CceEEEeccCCCHHHHHHHHHHHHh
Q 024752 9 WSLK-GMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKG-LQVSGSVCDLKIRAQREKLMETVSS 86 (263)
Q Consensus 9 ~~~~-~k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (263)
.+++ |++||=.|++.|. ++..|++.+.+|+.++-++.-++...+.....+ .++.++..|..+.. + .
T Consensus 12 ~~~~~~~rILDiGcGtG~---~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~~----~-~---- 79 (234)
T d1xxla_ 12 AECRAEHRVLDIGAGAGH---TALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP----F-P---- 79 (234)
T ss_dssp HTCCTTCEEEEESCTTSH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC----S-C----
T ss_pred hCCCCCCEEEEeCCcCcH---HHHHHHHhCCeEEEEeCChhhhhhhhhhhccccccccccccccccccc----c-c----
Confidence 3444 7889999999884 456677788999999999988776666555544 35888888876421 0 0
Q ss_pred hcCCCccEEEeCCCCC
Q 024752 87 QFDGKLNILINNAGTF 102 (263)
Q Consensus 87 ~~~~~id~li~~ag~~ 102 (263)
.+.+|+++++-.+.
T Consensus 80 --~~~fD~v~~~~~l~ 93 (234)
T d1xxla_ 80 --DDSFDIITCRYAAH 93 (234)
T ss_dssp --TTCEEEEEEESCGG
T ss_pred --ccccceeeeeceee
Confidence 25789988876553
|
| >d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Cystathionine beta-synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.18 E-value=4.3 Score=32.19 Aligned_cols=52 Identities=8% Similarity=0.106 Sum_probs=33.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCeEEEeeCCchhHHHHHHHHHhcCCceEE
Q 024752 14 MTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSG 66 (263)
Q Consensus 14 k~vlVtGas~giG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~ 66 (263)
...+|+..+|--|.++|..-+..|.+++++.-..... ...+.++..|.++..
T Consensus 97 ~~~vv~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~-~k~~~i~~~GA~vv~ 148 (355)
T d1jbqa_ 97 GDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSS-EKVDVLRALGAEIVR 148 (355)
T ss_dssp TCEEEEECSSHHHHHHHHHHHHHTCEEEEEECSCCCH-HHHHHHHHTTCEEEE
T ss_pred CceEEEecccchhhHHHHHHHhccCCeEEEeeccchH-HHHHHHHhcCCeEEE
Confidence 4578888889999999999999999755544332222 223334445554443
|