Citrus Sinensis ID: 024765

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260---
Protein Sequence
MATFSLQSPLCTSPIPYYRNDHALMSSMLQSSKRHKKLISRCNFGKTVAMSDAQSEKDLIITKHKEPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTVSNSPSSQADIT
Secondary Structure (PSIPRED)
ccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccHHHHHccccccccccEEEEcccccccccccHHHHHHHHHcccccccccccccccccccEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHcHHHHHHHHHHccccEEEccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHccccccccccccccccccccccccccccccccccccccccccEEEEEccccccccccccccccccEEEEEEEEEEccEccHHHHHHHHHHccccEEEccccccccccccEEEccccccHHHHccHHHHHcccHHHHHHHHHHHHHHHHccccHHHHccccHHcEEEEEccccccHHHHHHHHHHHHcccHHccccHHHHHcccHHHHHHHHHHcccccEEccccHHHHHHHHHHHHHHHHHHccccEEEEccccccc
Coil and Loop (DISEMBL)
matfslqsplctspipyyrndHALMSSMLQSSKRHKKLISRCNfgktvamsdaqSEKDLIITkhkepkerrIVVTGlgavtplgddahLFHTSLLegvtgisdiqgfdcsefpTRIAAEIKSlstggwispkiaKKADKYLIYALVAGKKALVDAgiteqvsgeldksrcgvIIGSAMGGLRVLNDGFEAIKVSYKkmspfyipysltNMASAVLAMdlgwtgpsysistacassnysilnatshiikgdtvsnspssqadit
Flexible Loop (DISEMBL)
matfslqsplctSPIPYYRNDHALMSSMLQSSKRHKKLISRCNFGktvamsdaqsekdliitkhkepkerriVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKslstggwispKIAKKADKYLIYALVAGKKALVDAGITeqvsgeldksrcGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHiikgdtvsnspssqadit
Low Complexity Region (SEG)
MATFSLQSPLCTSPIPYYRNDHALMSSMLQSSKRHKKLISRCNFGKTVAMSDAQSEKDLIITKHKEPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTVSNSPSSQADIT
Disordered region (IsUnstruct)
**************IPYYR*******************ISRCNFGKT************II********RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIK***************
Disordered Region (DISOPRED)
********PLCT**I*******************************************************RIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTVSNSPSSQADI*
Disordered Region (DISEMBL)
MATFSLQSPLCTSPIPYYRNDHALMSSMLQSSKRHKKLISRCNFGKTVAMSDAQSEKDLIITKHKEPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGD*************
Disordered Region (DISPRO)
*******SPLCTSPIPY*************************************************PKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTVSNSPSSQA***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MATFSLQSPLCTSPIPYYRNDHALMSSMLQSSKRHKKLISRCNFGKTVAMSDAQSEKDLIITKHKEPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTVSNSPSSQADIT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	263	2.2.26 [Sep-21-2011]
Q9C9P4	541	3-oxoacyl-[acyl-carrier-p	yes	no	0.893	0.434	0.531	7e-74
P52410	473	3-oxoacyl-[acyl-carrier-p	no	no	0.847	0.471	0.396	5e-44
P23902	462	3-oxoacyl-[acyl-carrier-p	N/A	no	0.711	0.404	0.439	3e-42
P55338	415	3-oxoacyl-[acyl-carrier-p	yes	no	0.673	0.426	0.378	3e-28
Q9KQH9	414	3-oxoacyl-[acyl-carrier-p	yes	no	0.680	0.432	0.371	4e-28
O34340	413	3-oxoacyl-[acyl-carrier-p	yes	no	0.673	0.428	0.367	2e-27
Q83E37	414	3-oxoacyl-[acyl-carrier-p	yes	no	0.684	0.434	0.353	2e-26
P73283	416	3-oxoacyl-[acyl-carrier-p	N/A	no	0.680	0.430	0.360	6e-26
Q8NXE1	414	3-oxoacyl-[acyl-carrier-p	yes	no	0.676	0.429	0.322	2e-23
Q6GAU2	414	3-oxoacyl-[acyl-carrier-p	yes	no	0.676	0.429	0.322	2e-23

>sp|Q9C9P4|KASC2_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic OS=Arabidopsis thaliana GN=KAS2 PE=1 SV=1

 Score =  277 bits (708), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 128/241 (53%), Positives = 181/241 (75%), Gaps = 6/241 (2%)

Query: 14  PIPYYRNDHALMSSMLQSS----KRHKKLISRCNFGKTVAMSDAQSEKDLIITKHKEPKE 69
           P  +Y N++AL SS+  S+     R+++ ++R       AM+  + EK+  + K    ++
Sbjct: 72  PCTHYNNNNAL-SSLFGSNSVSLNRNQRRLNRAA-SSGGAMAVMEMEKEAAVNKKPPTEQ 129

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           RR+VVTG+G  T LG D H F+ +LL+G +GIS I+ FDCSEFPTRIA EIKS ST GW+
Sbjct: 130 RRVVVTGMGVETSLGHDPHTFYENLLQGNSGISQIENFDCSEFPTRIAGEIKSFSTEGWV 189

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
           +PK++K+ DK+++Y L AGKKAL D G+T++V  E DK++CGV+IGSAMGG++V  D  E
Sbjct: 190 APKLSKRMDKFMLYLLTAGKKALADGGVTDEVMAEFDKTKCGVLIGSAMGGMKVFYDAIE 249

Query: 190 AIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKG 249
           A+++SYKKM+PF +P++ TNM SA+LAMDLGW GP+YSISTACA+SN+ ILN+ +HIIKG
Sbjct: 250 ALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNSANHIIKG 309

Query: 250 D 250
           +
Sbjct: 310 E 310

Essential protein that catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Specific for elongation from C-16 and C-16 to unsaturated C-18 fatty acids. Confers resistance to low temperatures by maintaining chloroplast membranes integrity. Involved in the regulation of fatty acids ratios during seed metabolism. Required for embryo development, especially at the transition from the globular to the heart stage.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 4EC: 1

>sp|P52410|KASC1_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Arabidopsis thaliana GN=KAS1 PE=1 SV=2

 Score =  177 bits (450), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 94/237 (39%), Positives = 144/237 (60%), Gaps = 14/237 (5%)

Query: 15  IPYYRNDHALMSSMLQSSKRHKKLISRCNFGKTVAMSDAQSEKDLIITKHKEPKERRIVV 74
           +P  R  H L+++     ++ +  IS         +S  + E D        PK +R+V+
Sbjct: 19  LPSNRQSHQLITNARPLRRQQRSFIS----ASASTVSAPKRETD--------PK-KRVVI 65

Query: 75  TGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIA 134
           TG+G V+  G+D   ++  LL G +GIS I  FD S+FPTR   +I+  S+ G+I  K  
Sbjct: 66  TGMGLVSVFGNDVDAYYEKLLSGESGISLIDRFDASKFPTRFGGQIRGFSSEGYIDGKNE 125

Query: 135 KKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEA-IKV 193
           ++ D  L Y +VAGKKAL  A +       +DK + GV++G+ MGGL V ++G +  I+ 
Sbjct: 126 RRLDDCLKYCIVAGKKALESANLGGDKLNTIDKRKAGVLVGTGMGGLTVFSEGVQNLIEK 185

Query: 194 SYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGD 250
            ++++SPF+IPY++TNM SA+LA+DLG  GP+YSISTACA+SNY    A +HI +G+
Sbjct: 186 GHRRISPFFIPYAITNMGSALLAIDLGLMGPNYSISTACATSNYCFYAAANHIRRGE 242

Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Specific for elongation from C-10 to unsaturated C-16 and C-18 fatty acids.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: 1

>sp|P23902|KASC1_HORVU 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Hordeum vulgare GN=KAS12 PE=1 SV=1

 Score =  172 bits (435), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 84/191 (43%), Positives = 127/191 (66%), Gaps = 4/191 (2%)

Query: 63  KHKEPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKS 122
           +  +P+ +R+V+TG+G  +  G D   F+  LL G +G+  I  FD S FPTR A +I+ 
Sbjct: 42  RETDPR-KRVVITGMGLASVFGSDVDTFYDRLLAGESGVGPIDRFDASSFPTRFAGQIRG 100

Query: 123 LSTGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSG--ELDKSRCGVIIGSAMGG 180
            S+ G+I  K  ++ D  + Y +++GKKAL  AG+        +LD  R GV++G+ MGG
Sbjct: 101 FSSEGYIDGKNDRRLDDCIRYCILSGKKALESAGLGAGSDAHVKLDVGRAGVLVGTGMGG 160

Query: 181 LRVLNDGFEA-IKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSI 239
           L V +DG +  I+  Y+K+SPF+IPY++TNM SA+LA+D+G+ GP+YSISTACA+SNY  
Sbjct: 161 LSVFSDGVQNLIEKGYRKISPFFIPYAITNMGSALLAIDVGFMGPNYSISTACATSNYCF 220

Query: 240 LNATSHIIKGD 250
             A +HI +G+
Sbjct: 221 YAAANHIRRGE 231

Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Specific for elongation from C-10 to unsaturated C-16 and C-18 fatty acids.

Hordeum vulgare (taxid: 4513)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: 1

>sp|P55338|FABF_VIBHA 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio harveyi GN=fabF PE=3 SV=2

 Score =  125 bits (315), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 70/185 (37%), Positives = 114/185 (61%), Gaps = 8/185 (4%)

Query: 69  ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
           +RR+VVTG+G ++P+G+       +LLEG +GI +I+ FD + F TR A  +K      +
Sbjct: 3   KRRVVVTGMGMLSPVGNTVESSWKALLEGQSGIVNIEHFDATNFSTRFAGLVKDFDCTEY 62

Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAG--ITEQVSGELDKSRCGVIIGSAMGGLRVLND 186
           +S K A+K D ++ Y + AG +AL D+G  ITE+     + +R GV IGS +GGL ++  
Sbjct: 63  MSKKDARKMDLFIQYGIAAGIQALDDSGLEITEE-----NAARVGVAIGSGIGGLDLIEA 117

Query: 187 GFEA-IKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSH 245
           G  A ++   +K+SPF++P ++ NM +  L++  G  GP+ +ISTAC +  ++I +A   
Sbjct: 118 GHSALVEKGPRKVSPFFVPSTIVNMVAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARM 177

Query: 246 IIKGD 250
           I  GD
Sbjct: 178 IAYGD 182

Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis.

Vibrio harveyi (taxid: 669)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 9

>sp|Q9KQH9|FABF_VIBCH 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=fabF PE=3 SV=3

 Score =  125 bits (313), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 68/183 (37%), Positives = 112/183 (61%), Gaps = 4/183 (2%)

Query: 69  ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
           +RR+VVTG+G ++P+G+       +LL G +GI +I+ FD + F TR A  +K      +
Sbjct: 3   KRRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKGFDCEQY 62

Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGF 188
           +S K A+K D ++ Y + AG +AL D+G+      E + +R GV IGS +GGL ++  G 
Sbjct: 63  MSKKDARKMDLFIQYGIAAGIQALEDSGLEVN---EENAARIGVAIGSGIGGLELIETGH 119

Query: 189 EA-IKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
           +A I+   +K+SPF++P ++ NM +  L++  G  GP+ +ISTAC +  ++I +A   I 
Sbjct: 120 QALIEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARMIA 179

Query: 248 KGD 250
            GD
Sbjct: 180 YGD 182

Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis.

Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) (taxid: 243277)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 9

>sp|O34340|FABF_BACSU 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Bacillus subtilis (strain 168) GN=fabF PE=3 SV=1

 Score =  122 bits (307), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 68/185 (36%), Positives = 111/185 (60%), Gaps = 8/185 (4%)

Query: 69  ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
           ++R+VVTGLGA++PLG+D      + + GV+GI  I   D  E+P ++AAE+K  +   +
Sbjct: 3   KKRVVVTGLGALSPLGNDVDTSWNNAINGVSGIGPITRVDAEEYPAKVAAELKDFNVEDY 62

Query: 129 ISPKIAKKADKYLIYALVAGKKALVDA--GITEQVSGELDKSRCGVIIGSAMGGLRVLND 186
           +  K A+K D++  YA+VA K A+ DA   IT++++      R GV +GS +GGL  L  
Sbjct: 63  MDKKEARKMDRFTQYAVVAAKMAVEDADLNITDEIA-----PRVGVWVGSGIGGLETLES 117

Query: 187 GFEA-IKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSH 245
            FE  +    +++SPF++P  + +MA+  +++ LG  G +    TACA+   SI +A   
Sbjct: 118 QFEIFLTKGPRRVSPFFVPMMIPDMATGQISIALGAKGVNSCTVTACATGTNSIGDAFKV 177

Query: 246 IIKGD 250
           I +GD
Sbjct: 178 IQRGD 182

Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 9

>sp|Q83E37|FABF_COXBU 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Coxiella burnetii (strain RSA 493 / Nine Mile phase I) GN=fabF PE=1 SV=1

 Score =  119 bits (298), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 109/184 (59%), Gaps = 4/184 (2%)

Query: 68  KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG 127
           ++RR+V+TGLG V+PLG+       +LL G +G+  I  FD S FPT+IAAE++      
Sbjct: 2   EKRRVVITGLGVVSPLGNKVSDMWQALLAGKSGVKPITRFDASSFPTQIAAEVRDFDPAL 61

Query: 128 WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDG 187
            +  K  +K D ++ +A+ + ++A  D+G+      E +  R GV IGS +GG+  +   
Sbjct: 62  VLDLKSIRKTDVFVQFAMESARQAWEDSGLEIN---ETNAPRVGVAIGSGIGGMPWIEKN 118

Query: 188 FEAIKVS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHI 246
           ++A+  S  +K+SPF+IP ++ NMAS ++++     GP+ SI TAC +  ++I +A   I
Sbjct: 119 YDALLTSGPRKISPFFIPGAIINMASGMVSIKYDLKGPNISIVTACTTGLHNIGHAARMI 178

Query: 247 IKGD 250
              D
Sbjct: 179 AHND 182

Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis.

Coxiella burnetii (strain RSA 493 / Nine Mile phase I) (taxid: 227377)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 9

>sp|P73283|FABF_SYNY3 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=fabF PE=1 SV=1

 Score =  117 bits (294), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 66/183 (36%), Positives = 105/183 (57%), Gaps = 4/183 (2%)

Query: 68  KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG 127
           +++R+VVTGLGA+TP+G+    +   L+EG  GI  I  FD S+   R   E+K      
Sbjct: 5   EKKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDATQ 64

Query: 128 WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDG 187
           ++  K AK+ D++  +A+ A ++A+ DA +   V  EL+    GV+IG+ +GGL+VL D 
Sbjct: 65  FLDRKEAKRMDRFCHFAVCASQQAINDAKL---VINELNADEIGVLIGTGIGGLKVLEDQ 121

Query: 188 FEA-IKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHI 246
               +     + SPF IP  + NMAS + A++LG  GP+    TACA+ + +I +A   +
Sbjct: 122 QTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGSNAIGDAFRLV 181

Query: 247 IKG 249
             G
Sbjct: 182 QNG 184

Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates.

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 9

>sp|Q8NXE1|FABF_STAAW 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain MW2) GN=fabF PE=1 SV=1

 Score =  109 bits (272), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 105/186 (56%), Gaps = 8/186 (4%)

Query: 68  KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG 127
           + +R+V+TG+GA++P+G+D      + L+GV GI  I   D   +   +A E+K+ +   
Sbjct: 3   QNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIED 62

Query: 128 WISPKIAKKADKYLIYALVAGKKALVDA--GITEQVSGELDKSRCGVIIGSAMGGLRVLN 185
            I  K A++ D++  YA+VA ++A+ DA   I E  +      R GV IGS +GG+    
Sbjct: 63  HIDKKEARRMDRFTQYAIVAAREAVKDAQLDINENTA-----DRIGVWIGSGIGGMETFE 117

Query: 186 DGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATS 244
              + +     +++SPF++P  + +MA+  +++DLG  GP+ +  TACA+   SI  A  
Sbjct: 118 IAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFK 177

Query: 245 HIIKGD 250
            + +GD
Sbjct: 178 IVQRGD 183

Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.

Staphylococcus aureus (strain MW2) (taxid: 196620)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 9

>sp|Q6GAU2|FABF_STAAS 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain MSSA476) GN=fabF PE=3 SV=1

 Score =  109 bits (272), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 105/186 (56%), Gaps = 8/186 (4%)

Query: 68  KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG 127
           + +R+V+TG+GA++P+G+D      + L+GV GI  I   D   +   +A E+K+ +   
Sbjct: 3   QNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIED 62

Query: 128 WISPKIAKKADKYLIYALVAGKKALVDA--GITEQVSGELDKSRCGVIIGSAMGGLRVLN 185
            I  K A++ D++  YA+VA ++A+ DA   I E  +      R GV IGS +GG+    
Sbjct: 63  HIDKKEARRMDRFTQYAIVAAREAVKDAQLDINENTA-----DRIGVWIGSGIGGMETFE 117

Query: 186 DGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATS 244
              + +     +++SPF++P  + +MA+  +++DLG  GP+ +  TACA+   SI  A  
Sbjct: 118 IAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFK 177

Query: 245 HIIKGD 250
            + +GD
Sbjct: 178 IVQRGD 183

Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.

Staphylococcus aureus (strain MSSA476) (taxid: 282459)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	263
408384466	554	beta-ketoacyl-ACP synthase II [Camelina	0.901	0.427	0.528	8e-74
346995771	573	beta-ketoacyl-ACP synthase II [Jatropha	0.920	0.422	0.528	2e-73
297738522	517	unnamed protein product [Vitis vinifera]	0.893	0.454	0.545	3e-73
225444641	555	PREDICTED: 3-oxoacyl-[acyl-carrier-prote	0.908	0.430	0.542	3e-73
255550355	554	46 kDa ketoavyl-ACP synthase [Ricinus co	0.927	0.440	0.528	4e-73
294666	535	chloroplast beta-ketoacyl-ACP synthase p	0.927	0.456	0.528	4e-73
408384464	553	beta-ketoacyl-ACP synthase II [Camelina	0.836	0.397	0.558	1e-72
408384468	556	beta-ketoacyl-ACP synthase II [Camelina	0.836	0.395	0.561	2e-72
112430753	491	plastid 3-keto-acyl-ACP synthase II [Hel	0.809	0.433	0.570	2e-72
18410739	541	3-oxoacyl-[acyl-carrier-protein] synthas	0.893	0.434	0.531	4e-72

>gi|408384466|gb|AFU61918.1| beta-ketoacyl-ACP synthase II [Camelina sativa]

 Score =  282 bits (722), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 128/242 (52%), Positives = 179/242 (73%), Gaps = 5/242 (2%)

Query: 14  PIPYYRNDH-----ALMSSMLQSSKRHKKLISRCNFGKTVAMSDAQSEKDLIITKHKEPK 68
           P  +Y N +     +L  S   S  R+++ ++R       AM+  + EK+ ++ K    +
Sbjct: 82  PCTHYSNTNNNALSSLFGSNTLSVNRNQRRLNRATPSSGGAMAVMEMEKEAMVNKKPPTE 141

Query: 69  ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
           +RR+VVTG+G  TPLG D H F+ +LL+G +GIS I+ FDCSEFPTRIA EIKS ST GW
Sbjct: 142 QRRVVVTGMGVETPLGHDPHTFYENLLQGNSGISQIENFDCSEFPTRIAGEIKSFSTEGW 201

Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGF 188
           ++PK++K+ DK+++Y L AGKKAL D G+TE+V  E DK++CGV+IGSAMGG++V  D  
Sbjct: 202 VAPKLSKRMDKFMLYLLTAGKKALADGGVTEEVMAEFDKTKCGVLIGSAMGGMKVFYDAI 261

Query: 189 EAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIK 248
           EA+++SYKKM+PF +P++ TNM SA+LAMDLGW GP+YSISTACA+SN+ ILN+ +HIIK
Sbjct: 262 EALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNSANHIIK 321

Query: 249 GD 250
           G+
Sbjct: 322 GE 323

Source: Camelina sativa

Species: Camelina sativa

Genus: Camelina

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|346995771|gb|ABJ90469.2| beta-ketoacyl-ACP synthase II [Jatropha curcas]

 Score =  281 bits (719), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 130/246 (52%), Positives = 185/246 (75%), Gaps = 4/246 (1%)

Query: 6   LQSPLCTSPIPYYRNDHALMSSMLQSSKRHKKLISRCNF-GKTVAMSDAQSEKDLIITKH 64
           + S L   P   Y + + L  S  ++  R ++ ++R    G+ +A++  Q EK++   K 
Sbjct: 100 MSSCLAFEPCSQYYSSNGLFRS--RNLNRKQRRLNRLALSGEAMAIA-VQPEKEVATKKK 156

Query: 65  KEPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLS 124
              K+RR+VVTG+G V+PLG +  +F+ +LLEGV+GIS I+ F+C++FPTRIA EIKS S
Sbjct: 157 PATKQRRVVVTGMGVVSPLGHEPDVFYNNLLEGVSGISQIEAFECAQFPTRIAGEIKSFS 216

Query: 125 TGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVL 184
           T GWI+PK++K+ DK+++Y L AGKKAL D GITE +  ELDK++CGV+IGSAMGG++V 
Sbjct: 217 TDGWIAPKLSKRMDKFMLYMLTAGKKALADGGITEDIMDELDKAKCGVLIGSAMGGMKVF 276

Query: 185 NDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATS 244
           ND  EA++VSY+KM+PF +P++ TNM SA+LAMDLGW GP+YSISTACA+SN+ ILNA +
Sbjct: 277 NDAIEALRVSYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAAN 336

Query: 245 HIIKGD 250
           HII+G+
Sbjct: 337 HIIRGE 342

Source: Jatropha curcas

Species: Jatropha curcas

Genus: Jatropha

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297738522|emb|CBI27767.3| unnamed protein product [Vitis vinifera]

 Score =  281 bits (718), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 132/242 (54%), Positives = 185/242 (76%), Gaps = 7/242 (2%)

Query: 15  IPY--YRNDHALMSSM----LQSSKRHKKLISRCNFGKTVAMSDAQSEKDLIITKHKEPK 68
           +PY  +  D+AL S      L  ++R ++     + G+T+A++  Q  K++   K    +
Sbjct: 46  LPYSAFFGDNALSSVFGSKSLPLNRRQRRTNRGSHSGETMAVA-VQPAKEVTTKKKPLTE 104

Query: 69  ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
           +RR+VVTG+G ++P+G +   F+ +LLEGV+GIS+I+ FDCS FPTRIA EIKS ST GW
Sbjct: 105 QRRVVVTGMGVMSPIGHEPDSFYNNLLEGVSGISEIESFDCSHFPTRIAGEIKSFSTDGW 164

Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGF 188
           I+PK++K+ DK+++Y L AGKKAL D GITE V+ ELDKSRCGV+IGSAMGG++V ND  
Sbjct: 165 IAPKLSKRMDKFMLYMLTAGKKALADGGITEDVTDELDKSRCGVLIGSAMGGIKVFNDAI 224

Query: 189 EAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIK 248
           EA++VSY+KM+PF +P++ TNM SA+LAMDLGW GP+YSISTACA+SN+ ILNA++HII+
Sbjct: 225 EALRVSYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNASNHIIR 284

Query: 249 GD 250
           G+
Sbjct: 285 GE 286

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225444641|ref|XP_002276214.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic-like [Vitis vinifera]

 Score =  281 bits (718), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 134/247 (54%), Positives = 188/247 (76%), Gaps = 8/247 (3%)

Query: 11  CTSP-IPY--YRNDHALMSSM----LQSSKRHKKLISRCNFGKTVAMSDAQSEKDLIITK 63
           C+S  +PY  +  D+AL S      L  ++R ++     + G+T+A++  Q  K++   K
Sbjct: 79  CSSKGLPYSAFFGDNALSSVFGSKSLPLNRRQRRTNRGSHSGETMAVA-VQPAKEVTTKK 137

Query: 64  HKEPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSL 123
               ++RR+VVTG+G ++P+G +   F+ +LLEGV+GIS+I+ FDCS FPTRIA EIKS 
Sbjct: 138 KPLTEQRRVVVTGMGVMSPIGHEPDSFYNNLLEGVSGISEIESFDCSHFPTRIAGEIKSF 197

Query: 124 STGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRV 183
           ST GWI+PK++K+ DK+++Y L AGKKAL D GITE V+ ELDKSRCGV+IGSAMGG++V
Sbjct: 198 STDGWIAPKLSKRMDKFMLYMLTAGKKALADGGITEDVTDELDKSRCGVLIGSAMGGIKV 257

Query: 184 LNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNAT 243
            ND  EA++VSY+KM+PF +P++ TNM SA+LAMDLGW GP+YSISTACA+SN+ ILNA+
Sbjct: 258 FNDAIEALRVSYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAS 317

Query: 244 SHIIKGD 250
           +HII+G+
Sbjct: 318 NHIIRGE 324

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class: N/A

Phylum: Streptophyta

>gi|255550355|ref|XP_002516228.1| 46 kDa ketoavyl-ACP synthase [Ricinus communis] gi|223544714|gb|EEF46230.1| 46 kDa ketoavyl-ACP synthase [Ricinus communis]

 Score =  280 bits (717), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 130/246 (52%), Positives = 182/246 (73%), Gaps = 2/246 (0%)

Query: 6   LQSPLCTSPIPYYRNDHALMSSMLQSSKRHKKLISRC-NFGKTVAMSDAQSEKDLIITKH 64
           + S L   P  +Y + + L  +     KRH +L  R    G+ +A++  Q EK++   K 
Sbjct: 79  MSSCLAFEPCSHYYSSNGLFPNTPLLPKRHPRLHHRLPRSGEAMAVA-VQPEKEVATNKK 137

Query: 65  KEPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLS 124
              K+RR+VVTG+G V+PLG D  +++ +LL+G +GIS I  FDC++FPTRIA EIKS S
Sbjct: 138 PLMKQRRVVVTGMGVVSPLGHDIDVYYNNLLDGSSGISQIDSFDCAQFPTRIAGEIKSFS 197

Query: 125 TGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVL 184
           T GW++PK++K+ DK+++Y L AGKKAL D GITE +  ELDK+RCGV+IGSAMGG++V 
Sbjct: 198 TDGWVAPKLSKRMDKFMLYMLTAGKKALADGGITEDMMDELDKARCGVLIGSAMGGMKVF 257

Query: 185 NDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATS 244
           ND  EA+++SY+KM+PF +P++ TNM SA+LAMDLGW GP+YSISTACA+SN+ ILNA +
Sbjct: 258 NDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAAN 317

Query: 245 HIIKGD 250
           HII+G+
Sbjct: 318 HIIRGE 323

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|294666|gb|AAA33872.1| chloroplast beta-ketoacyl-ACP synthase precursor [Ricinus communis] gi|148645269|gb|ABR01158.1| plastid 3-keto-acyl-ACP synthase II [Ricinus communis]

 Score =  280 bits (716), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 130/246 (52%), Positives = 182/246 (73%), Gaps = 2/246 (0%)

Query: 6   LQSPLCTSPIPYYRNDHALMSSMLQSSKRHKKLISRC-NFGKTVAMSDAQSEKDLIITKH 64
           + S L   P  +Y + + L  +     KRH +L  R    G+ +A++  Q EK++   K 
Sbjct: 60  MSSCLAFEPCSHYYSSNGLFPNTPLLPKRHPRLHHRLPRSGEAMAVA-VQPEKEVATNKK 118

Query: 65  KEPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLS 124
              K+RR+VVTG+G V+PLG D  +++ +LL+G +GIS I  FDC++FPTRIA EIKS S
Sbjct: 119 PLMKQRRVVVTGMGVVSPLGHDIDVYYNNLLDGSSGISQIDSFDCAQFPTRIAGEIKSFS 178

Query: 125 TGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVL 184
           T GW++PK++K+ DK+++Y L AGKKAL D GITE +  ELDK+RCGV+IGSAMGG++V 
Sbjct: 179 TDGWVAPKLSKRMDKFMLYMLTAGKKALADGGITEDMMDELDKARCGVLIGSAMGGMKVF 238

Query: 185 NDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATS 244
           ND  EA+++SY+KM+PF +P++ TNM SA+LAMDLGW GP+YSISTACA+SN+ ILNA +
Sbjct: 239 NDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAAN 298

Query: 245 HIIKGD 250
           HII+G+
Sbjct: 299 HIIRGE 304

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|408384464|gb|AFU61917.1| beta-ketoacyl-ACP synthase II [Camelina sativa]

 Score =  279 bits (713), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 124/222 (55%), Positives = 172/222 (77%), Gaps = 2/222 (0%)

Query: 31  SSKRHKKLISRCNFGKTV--AMSDAQSEKDLIITKHKEPKERRIVVTGLGAVTPLGDDAH 88
           S  RH++ ++R     +   AM+  + EK+ ++ K    ++RR+VVTG+G  TPLG D H
Sbjct: 101 SLNRHQRRLNRATSSSSSGGAMAVMEMEKEAMVNKKPPTEQRRVVVTGMGVETPLGHDPH 160

Query: 89  LFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG 148
            F+ +LL+G +GIS I+ FDCSEFPTRIA EIKS ST GW++PK++K+ DK+++Y L AG
Sbjct: 161 TFYENLLQGNSGISQIENFDCSEFPTRIAGEIKSFSTEGWVAPKLSKRMDKFMLYLLTAG 220

Query: 149 KKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLT 208
           KKAL D G+TE+V  E DK++CGV+IGSAMGG++V  D  EA+++SYKKM+PF +P++ T
Sbjct: 221 KKALADGGVTEEVMAEFDKTKCGVLIGSAMGGMKVFYDAIEALRISYKKMNPFCVPFATT 280

Query: 209 NMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGD 250
           NM SA+LAMDLGW GP+YSISTACA+SN+ ILN+ +HIIKG+
Sbjct: 281 NMGSAMLAMDLGWMGPNYSISTACATSNFCILNSANHIIKGE 322

Source: Camelina sativa

Species: Camelina sativa

Genus: Camelina

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|408384468|gb|AFU61919.1| beta-ketoacyl-ACP synthase II [Camelina sativa]

 Score =  278 bits (710), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 124/221 (56%), Positives = 172/221 (77%), Gaps = 1/221 (0%)

Query: 31  SSKRHKKLISRC-NFGKTVAMSDAQSEKDLIITKHKEPKERRIVVTGLGAVTPLGDDAHL 89
           S  RH++ ++R  +     AM+  + EK+ ++ K    ++RR+VVTG+G  TPLG D H 
Sbjct: 105 SLNRHQRRLNRAASPSSGGAMAVMEMEKEAMVNKKPPTEQRRVVVTGMGVETPLGHDPHT 164

Query: 90  FHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGK 149
           F+ +LL+G +GIS I+ FDCSEFPTRIA EIKS ST GW++PK++K+ DK+++Y L AGK
Sbjct: 165 FYENLLQGNSGISQIENFDCSEFPTRIAGEIKSFSTEGWVAPKLSKRMDKFMLYLLTAGK 224

Query: 150 KALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTN 209
           KAL D G+TE+V  E DK++CGV+IGSAMGG++V  D  EA+++SYKKM+PF +P++ TN
Sbjct: 225 KALADGGVTEEVMAEFDKTKCGVLIGSAMGGMKVFYDAIEALRISYKKMNPFCVPFATTN 284

Query: 210 MASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGD 250
           M SA+LAMDLGW GP+YSISTACA+SN+ ILN+ +HIIKG+
Sbjct: 285 MGSAMLAMDLGWMGPNYSISTACATSNFCILNSANHIIKGE 325

Source: Camelina sativa

Species: Camelina sativa

Genus: Camelina

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|112430753|gb|ABI18155.1| plastid 3-keto-acyl-ACP synthase II [Helianthus annuus]

 Score =  278 bits (710), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 126/221 (57%), Positives = 174/221 (78%), Gaps = 8/221 (3%)

Query: 38  LISRCNFGKTVAMSDA------QSEKDLIITKHKEP--KERRIVVTGLGAVTPLGDDAHL 89
           L SRC  G  VAM+ A      + E++  +TK K+P  K+RR+VVTG+G  TP+G++   
Sbjct: 40  LSSRCRRGGRVAMAIAIQPSSIEMEEETTLTKRKQPPTKQRRVVVTGMGVETPIGNNPDQ 99

Query: 90  FHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGK 149
           F+ +LL+GV+GI+ I+ FDCS +PTRIA EIK+ ST GW++PK++K+ D++++Y L AGK
Sbjct: 100 FYNNLLQGVSGITQIEAFDCSSYPTRIAGEIKNFSTDGWVAPKLSKRMDRFMLYMLTAGK 159

Query: 150 KALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTN 209
           KAL DAGI+   S E+DKSRCGV+IGSAMGG++V ND  EA++VSY+KM+PF +P++ TN
Sbjct: 160 KALADAGISPSDSDEIDKSRCGVLIGSAMGGMKVFNDAIEALRVSYRKMNPFCVPFATTN 219

Query: 210 MASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGD 250
           M SA+LAMDLGW GP+YSISTACA+SN+ ILNA +HII+G+
Sbjct: 220 MGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGE 260

Source: Helianthus annuus

Species: Helianthus annuus

Genus: Helianthus

Family: Asteraceae

Order: Asterales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18410739|ref|NP_565097.1| 3-oxoacyl-[acyl-carrier-protein] synthase II [Arabidopsis thaliana] gi|30699063|ref|NP_849888.1| 3-oxoacyl-[acyl-carrier-protein] synthase II [Arabidopsis thaliana] gi|334183918|ref|NP_001185400.1| 3-oxoacyl-[acyl-carrier-protein] synthase II [Arabidopsis thaliana] gi|75308921|sp|Q9C9P4.1|KASC2_ARATH RecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic; AltName: Full=Beta-ketoacyl-acyl-carrier-protein synthase II; Short=AtKAS2; Short=Beta-ketoacyl-ACP synthetase 2; AltName: Full=Protein FATTY ACID BIOSYNTHESIS 1; Flags: Precursor gi|12323894|gb|AAG51920.1|AC013258_14 putative 3-ketoacyl-ACP synthase; 47419-50803 [Arabidopsis thaliana] gi|14582701|gb|AAK69603.1|AF318307_1 beta-ketoacyl-ACP synthetase 2 [Arabidopsis thaliana] gi|16930489|gb|AAL31930.1|AF419598_1 At1g74960/F9E10_19 [Arabidopsis thaliana] gi|15809858|gb|AAL06857.1| At1g74960/F9E10_19 [Arabidopsis thaliana] gi|20453243|gb|AAM19860.1| At1g74960/F9E10_19 [Arabidopsis thaliana] gi|332197534|gb|AEE35655.1| 3-oxoacyl-[acyl-carrier-protein] synthase II [Arabidopsis thaliana] gi|332197535|gb|AEE35656.1| 3-oxoacyl-[acyl-carrier-protein] synthase II [Arabidopsis thaliana] gi|332197536|gb|AEE35657.1| 3-oxoacyl-[acyl-carrier-protein] synthase II [Arabidopsis thaliana]

 Score =  277 bits (708), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 128/241 (53%), Positives = 181/241 (75%), Gaps = 6/241 (2%)

Query: 14  PIPYYRNDHALMSSMLQSS----KRHKKLISRCNFGKTVAMSDAQSEKDLIITKHKEPKE 69
           P  +Y N++AL SS+  S+     R+++ ++R       AM+  + EK+  + K    ++
Sbjct: 72  PCTHYNNNNAL-SSLFGSNSVSLNRNQRRLNRAA-SSGGAMAVMEMEKEAAVNKKPPTEQ 129

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           RR+VVTG+G  T LG D H F+ +LL+G +GIS I+ FDCSEFPTRIA EIKS ST GW+
Sbjct: 130 RRVVVTGMGVETSLGHDPHTFYENLLQGNSGISQIENFDCSEFPTRIAGEIKSFSTEGWV 189

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
           +PK++K+ DK+++Y L AGKKAL D G+T++V  E DK++CGV+IGSAMGG++V  D  E
Sbjct: 190 APKLSKRMDKFMLYLLTAGKKALADGGVTDEVMAEFDKTKCGVLIGSAMGGMKVFYDAIE 249

Query: 190 AIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKG 249
           A+++SYKKM+PF +P++ TNM SA+LAMDLGW GP+YSISTACA+SN+ ILN+ +HIIKG
Sbjct: 250 ALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNSANHIIKG 309

Query: 250 D 250
           +
Sbjct: 310 E 310

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Class: N/A

Phylum: Streptophyta

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	263
TAIR|locus:2027252	541	FAB1 "fatty acid biosynthesis	0.897	0.436	0.533	5.6e-68
UNIPROTKB|Q9KQH9	414	fabF "3-oxoacyl-[acyl-carrier-	0.680	0.432	0.377	3.9e-28
TIGR_CMR|VC_2019	414	VC_2019 "3-oxoacyl-(acyl-carri	0.680	0.432	0.377	3.9e-28
TIGR_CMR|SO_2774	412	SO_2774 "3-oxoacyl-(acyl-carri	0.730	0.466	0.336	1e-27
TIGR_CMR|GSU_1605	410	GSU_1605 "3-oxoacyl-(acyl-carr	0.676	0.434	0.379	2.8e-27
TIGR_CMR|CHY_1445	412	CHY_1445 "3-oxoacyl-(acyl-carr	0.726	0.463	0.336	5.7e-27
TIGR_CMR|CBU_0497	414	CBU_0497 "3-oxoacyl-acyl carri	0.684	0.434	0.353	1.9e-26
TIGR_CMR|CPS_2299	412	CPS_2299 "3-oxoacyl-[acyl-carr	0.676	0.432	0.364	3.2e-26
UNIPROTKB|P0AAI5	413	fabF "FabF" [Escherichia coli	0.680	0.433	0.366	4e-26
UNIPROTKB|Q71XG4	413	fabF "3-oxoacyl-[acyl-carrier-	0.730	0.464	0.324	1.1e-25

TAIR|locus:2027252 FAB1 "fatty acid biosynthesis 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
 Identities = 128/240 (53%), Positives = 179/240 (74%)

Query:    14 PIPYYRNDHALMS---SMLQSSKRHKKLISRCNFGKTVAMSDAQSEKDLIITKHKEPKER 70
             P  +Y N++AL S   S   S  R+++ ++R       AM+  + EK+  + K    ++R
Sbjct:    72 PCTHYNNNNALSSLFGSNSVSLNRNQRRLNRAA-SSGGAMAVMEMEKEAAVNKKPPTEQR 130

Query:    71 RIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWIS 130
             R+VVTG+G  T LG D H F+ +LL+G +GIS I+ FDCSEFPTRIA EIKS ST GW++
Sbjct:   131 RVVVTGMGVETSLGHDPHTFYENLLQGNSGISQIENFDCSEFPTRIAGEIKSFSTEGWVA 190

Query:   131 PKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEA 190
             PK++K+ DK+++Y L AGKKAL D G+T++V  E DK++CGV+IGSAMGG++V  D  EA
Sbjct:   191 PKLSKRMDKFMLYLLTAGKKALADGGVTDEVMAEFDKTKCGVLIGSAMGGMKVFYDAIEA 250

Query:   191 IKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGD 250
             +++SYKKM+PF +P++ TNM SA+LAMDLGW GP+YSISTACA+SN+ ILN+ +HIIKG+
Sbjct:   251 LRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNSANHIIKGE 310

GO:0003824 "catalytic activity" evidence=IEA

GO:0004312 "fatty acid synthase activity" evidence=ISS

GO:0006633 "fatty acid biosynthetic process" evidence=IEA;IDA

GO:0008152 "metabolic process" evidence=IEA

GO:0009058 "biosynthetic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA;TAS

GO:0004315 "3-oxoacyl-[acyl-carrier-protein

GO:0009536 "plastid" evidence=ISS

GO:0009631 "cold acclimation" evidence=IMP

GO:0009793 "embryo development ending in seed dormancy" evidence=IMP

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0000038 "very long-chain fatty acid metabolic process" evidence=RCA

GO:0000096 "sulfur amino acid metabolic process" evidence=RCA

GO:0006546 "glycine catabolic process" evidence=RCA

GO:0006733 "oxidoreduction coenzyme metabolic process" evidence=RCA

GO:0006766 "vitamin metabolic process" evidence=RCA

GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA

GO:0009072 "aromatic amino acid family metabolic process" evidence=RCA

GO:0009106 "lipoate metabolic process" evidence=RCA

GO:0009108 "coenzyme biosynthetic process" evidence=RCA

GO:0009117 "nucleotide metabolic process" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009416 "response to light stimulus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0015994 "chlorophyll metabolic process" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019216 "regulation of lipid metabolic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0019748 "secondary metabolic process" evidence=RCA

GO:0030243 "cellulose metabolic process" evidence=RCA

GO:0031408 "oxylipin biosynthetic process" evidence=RCA

GO:0042335 "cuticle development" evidence=RCA

GO:0044272 "sulfur compound biosynthetic process" evidence=RCA

UNIPROTKB|Q9KQH9 fabF "3-oxoacyl-[acyl-carrier-protein] synthase 2" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 69/183 (37%), Positives = 115/183 (62%)

Query:    69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
             +RR+VVTG+G ++P+G+       +LL G +GI +I+ FD + F TR A  +K      +
Sbjct:     3 KRRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKGFDCEQY 62

Query:   129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGF 188
             +S K A+K D ++ Y + AG +AL D+G+  +V+ E + +R GV IGS +GGL ++  G 
Sbjct:    63 MSKKDARKMDLFIQYGIAAGIQALEDSGL--EVNEE-NAARIGVAIGSGIGGLELIETGH 119

Query:   189 EA-IKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
             +A I+   +K+SPF++P ++ NM +  L++  G  GP+ +ISTAC +  ++I +A   I 
Sbjct:   120 QALIEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARMIA 179

Query:   248 KGD 250
              GD
Sbjct:   180 YGD 182

GO:0004315 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

TIGR_CMR|VC_2019 VC_2019 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 69/183 (37%), Positives = 115/183 (62%)

Query:    69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
             +RR+VVTG+G ++P+G+       +LL G +GI +I+ FD + F TR A  +K      +
Sbjct:     3 KRRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKGFDCEQY 62

Query:   129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGF 188
             +S K A+K D ++ Y + AG +AL D+G+  +V+ E + +R GV IGS +GGL ++  G 
Sbjct:    63 MSKKDARKMDLFIQYGIAAGIQALEDSGL--EVNEE-NAARIGVAIGSGIGGLELIETGH 119

Query:   189 EA-IKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
             +A I+   +K+SPF++P ++ NM +  L++  G  GP+ +ISTAC +  ++I +A   I 
Sbjct:   120 QALIEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARMIA 179

Query:   248 KGD 250
              GD
Sbjct:   180 YGD 182

GO:0004315 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

TIGR_CMR|SO_2774 SO_2774 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
 Identities = 66/196 (33%), Positives = 112/196 (57%)

Query:    69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
             +RR+VVTGLG VTP+G+       +LL G +GI+ I  FD SEF TR +  +K      +
Sbjct:     3 KRRVVVTGLGLVTPVGNTVDTTWKALLSGKSGIAPITKFDASEFTTRFSGSVKDFDVEQY 62

Query:   129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGF 188
             ++ K A+K D ++ Y + AG +A+ D+G+      +++  R G  IG+ MGG+ ++    
Sbjct:    63 LTKKDARKMDLFIQYGMAAGIQAIQDSGLD---MSKVNPGRVGTAIGAGMGGMWLIEQNH 119

Query:   189 EAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
              A+     +K+SPF++P ++ NM +  L++  G TGP+++++TAC +  ++I  A   I 
Sbjct:   120 SALMNGGPRKISPFFVPSTIINMIAGHLSIMYGMTGPNFAVTTACTTGVHNIGFAARTIA 179

Query:   248 KGDTVSNSPSSQADIT 263
              GD          D+T
Sbjct:   180 YGDADVMVAGGAEDVT 195

GO:0004315 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

TIGR_CMR|GSU_1605 GSU_1605 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
 Identities = 69/182 (37%), Positives = 108/182 (59%)

Query:    70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
             RR+VVTG+GAV+PLG        +L+ G +GI  I  FD S+ P RIA E+K      +I
Sbjct:     2 RRVVVTGVGAVSPLGVGNAANWDALVSGTSGIGHITRFDASDLPVRIAGEVKGFDPEQYI 61

Query:   130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
               K  KK D ++ YA+ A   A+ D+G+  Q++ E +  R GV++G+ +GGL  +     
Sbjct:    62 DKKEVKKMDLFIQYAMAAAHYAMEDSGL--QITEE-NAERTGVLVGAGLGGLPTIEKYHA 118

Query:   190 A-IKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIK 248
             A ++  +KK+SPF+IP  + N+A   +++  G  GP+ S  +ACA+  +SI +A   I +
Sbjct:   119 AMLEGGHKKISPFFIPMLIINLAPGHISIKYGAKGPNLSSVSACATGTHSIGDAYHMIKR 178

Query:   249 GD 250
             GD
Sbjct:   179 GD 180

GO:0004315 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

TIGR_CMR|CHY_1445 CHY_1445 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
 Identities = 66/196 (33%), Positives = 121/196 (61%)

Query:    70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
             +R+VVTGLG ++PLG        +L++GV+G+ ++  FD + F TRIAAE++      +I
Sbjct:     2 KRVVVTGLGLISPLGIGIKENWDNLMKGVSGVREVSSFDTTGFATRIAAEVRDFDPLKFI 61

Query:   130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
               K A++ D++  +A+ A K A+ DAG+  ++S +++  R G+ IGS +GG++ L +   
Sbjct:    62 DKKEARRMDRFTQFAVAATKLAIEDAGL--ELS-KINPERAGIFIGSGIGGIKTLEEQAA 118

Query:   190 AIKVSYK-KMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIK 248
              ++     ++SPF++P  + NMA   +A+  G TGP+ +I +ACAS   ++ +A   + +
Sbjct:   119 ILREKGPDRVSPFFVPMMIANMAGGQIAITFGLTGPNETIVSACASGANAVGDAFRCLQR 178

Query:   249 GDT-VSNSPSSQADIT 263
             G+  V+ +  ++A IT
Sbjct:   179 GEVDVAIAGGAEAAIT 194

GO:0004315 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

TIGR_CMR|CBU_0497 CBU_0497 "3-oxoacyl-acyl carrier protein synthase II" [Coxiella burnetii RSA 493 (taxid:227377)]

 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 65/184 (35%), Positives = 112/184 (60%)

Query:    68 KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG 127
             ++RR+V+TGLG V+PLG+       +LL G +G+  I  FD S FPT+IAAE++      
Sbjct:     2 EKRRVVITGLGVVSPLGNKVSDMWQALLAGKSGVKPITRFDASSFPTQIAAEVRDFDPAL 61

Query:   128 WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDG 187
              +  K  +K D ++ +A+ + ++A  D+G+  +++ E +  R GV IGS +GG+  +   
Sbjct:    62 VLDLKSIRKTDVFVQFAMESARQAWEDSGL--EIN-ETNAPRVGVAIGSGIGGMPWIEKN 118

Query:   188 FEAIKVSY-KKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHI 246
             ++A+  S  +K+SPF+IP ++ NMAS ++++     GP+ SI TAC +  ++I +A   I
Sbjct:   119 YDALLTSGPRKISPFFIPGAIINMASGMVSIKYDLKGPNISIVTACTTGLHNIGHAARMI 178

Query:   247 IKGD 250
                D
Sbjct:   179 AHND 182

GO:0004315 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

TIGR_CMR|CPS_2299 CPS_2299 "3-oxoacyl-[acyl-carrier-protein] synthase II" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 67/184 (36%), Positives = 111/184 (60%)

Query:    70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
             RR+VVTG+G ++PL + A     +LL G +GI +I  FD +++PT+ A  +K      ++
Sbjct:     2 RRVVVTGIGMLSPLANTAEETWQNLLLGKSGIGNIDHFDTTDYPTKFAGLVKDFDAQNYM 61

Query:   130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGF- 188
               K AKK D ++ Y + AG +A  D+G+  +V+ E +  R GV IGS +GGL ++     
Sbjct:    62 ERKEAKKMDLFIQYGIAAGVQAFKDSGL--EVT-EQNAPRIGVAIGSGIGGLGLIEQNHN 118

Query:   189 EAIKV--SYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHI 246
             + IK   + +K+SPF++P ++ NM +  L++  G  GP+ +I+TAC S  ++I +A   I
Sbjct:   119 KLIKAEGNPRKLSPFFVPSTIINMIAGHLSIMFGLQGPNIAITTACTSGVHNIGHAARMI 178

Query:   247 IKGD 250
               GD
Sbjct:   179 AYGD 182

GO:0004315 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

UNIPROTKB|P0AAI5 fabF "FabF" [Escherichia coli K-12 (taxid:83333)]

 Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
 Identities = 67/183 (36%), Positives = 110/183 (60%)

Query:    69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
             +RR+VVTGLG ++P+G+       +LL G +GIS I  FD S + T+ A  +K  +    
Sbjct:     3 KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDI 62

Query:   129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGF 188
             IS K  +K D ++ Y +VAG +A+ D+G+  +++ E + +R G  IGS +GGL ++ +  
Sbjct:    63 ISRKEQRKMDAFIQYGIVAGVQAMQDSGL--EITEE-NATRIGAAIGSGIGGLGLIEENH 119

Query:   189 EAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
              ++     +K+SPF++P ++ NM +  L +  G  GPS SI+TAC S  ++I +A   I 
Sbjct:   120 TSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGHAARIIA 179

Query:   248 KGD 250
              GD
Sbjct:   180 YGD 182

GO:0008152 "metabolic process" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0033817 "beta-ketoacyl-acyl-carrier-protein synthase II activity" evidence=IEA;IDA

GO:0005829 "cytosol" evidence=IDA

GO:0008610 "lipid biosynthetic process" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0004315 "3-oxoacyl-[acyl-carrier-protein

UNIPROTKB|Q71XG4 fabF "3-oxoacyl-[acyl-carrier-protein] synthase 2" [Listeria monocytogenes serotype 4b str. F2365 (taxid:265669)]

 Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
 Identities = 64/197 (32%), Positives = 117/197 (59%)

Query:    69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
             +RR+VVTG+GAVTP+G+DA     +  +GV G++ +   +  +FP +IAAE+K      +
Sbjct:     3 KRRVVVTGIGAVTPIGNDAETSWENAKKGVNGVAKMTRLNPDDFPVKIAAELKDFDVEKY 62

Query:   129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGF 188
             +  K A+K D++  YA+ + + A+ D+G+   V  + + +R GV IGS +GG+      +
Sbjct:    63 LEKKEARKMDRFTHYAIASAEMAVQDSGL---VIDDSNANRVGVWIGSGIGGMETFETQY 119

Query:   189 EA-IKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
             E  +   ++++SPF++P  + +M S  +++  G  G + +  TACA++  SI +A   I 
Sbjct:   120 EIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGAKGINSTTVTACATATNSIGDAFKVIE 179

Query:   248 KGDTVSN-SPSSQADIT 263
             +GD  +  +  ++A IT
Sbjct:   180 RGDADAMITGGAEAPIT 196

GO:0004315 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	263
PLN02787	540	PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protei	6e-99
cd00834	406	cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier prot	6e-63
TIGR03150	407	TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protei	2e-58
PRK06333	424	PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protei	4e-54
PRK07314	411	PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protei	1e-51
COG0304	412	COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) sy	5e-44
PRK08439	406	PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protei	1e-34
pfam00109	243	pfam00109, ketoacyl-synt, Beta-ketoacyl synthase,	3e-34
PRK08722	414	PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protei	5e-33
PTZ00050	421	PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein	6e-28
PLN02836	437	PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protei	2e-23
cd00828	407	cd00828, elong_cond_enzymes, "elongating" condensi	4e-22
PRK07967	406	PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protei	4e-21
PRK07910	418	PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protei	1e-13
cd00832	399	cd00832, CLF, Chain-length factor (CLF) is a facto	2e-13
cd00833	421	cd00833, PKS, polyketide synthases (PKSs) polymeri	3e-13
PRK07103	410	PRK07103, PRK07103, polyketide beta-ketoacyl:acyl	3e-10
COG3321	1061	COG3321, COG3321, Polyketide synthase modules and	2e-09
PRK09116	405	PRK09116, PRK09116, 3-oxoacyl-(acyl carrier protei	2e-07
cd00825	332	cd00825, decarbox_cond_enzymes, decarboxylating co	1e-06
PRK05952	381	PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protei	3e-06
PRK06501	425	PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protei	3e-04
PRK09185	392	PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protei	6e-04
PRK14691	342	PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protei	0.002

>gnl|CDD|215421 PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protein] synthase II

 Score =  299 bits (766), Expect = 6e-99
 Identities = 125/220 (56%), Positives = 173/220 (78%), Gaps = 1/220 (0%)

Query: 32  SKRHKKLISRCNFGKTVAMSDAQSEKDLIITKHKEPKERRIVVTGLGAVTPLGDDAHLFH 91
           ++  ++       GK +A++  Q EK++   K    K+RR+VVTG+G V+PLG D  +F+
Sbjct: 92  NRNQRRRNRAARSGKAMAVA-VQPEKEVETKKKPLTKQRRVVVTGMGVVSPLGHDPDVFY 150

Query: 92  TSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGKKA 151
            +LLEGV+GIS+I+ FDCS+FPTRIA EIKS ST GW++PK++K+ DK+++Y L AGKKA
Sbjct: 151 NNLLEGVSGISEIERFDCSQFPTRIAGEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKA 210

Query: 152 LVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMA 211
           L D GITE V  ELDK++CGV+IGSAMGG++V ND  EA+++SY+KM+PF +P++ TNM 
Sbjct: 211 LADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMG 270

Query: 212 SAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDT 251
           SA+LAMDLGW GP+YSISTACA+SN+ ILNA +HII+G+ 
Sbjct: 271 SAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEA 310

Length = 540

>gnl|CDD|238430 cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II

 Score =  202 bits (516), Expect = 6e-63
 Identities = 76/183 (41%), Positives = 114/183 (62%), Gaps = 4/183 (2%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           RR+V+TGLGAVTPLG+    F  +LL G +GI  I  FD S FP+RIA E+       ++
Sbjct: 1   RRVVITGLGAVTPLGNGVEEFWEALLAGRSGIRPITRFDASGFPSRIAGEVPDFDPEDYL 60

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K  ++ D++  +AL A ++AL DAG+      ELD  R GV+IGS +GGL  + + + 
Sbjct: 61  DRKELRRMDRFAQFALAAAEEALADAGLDP---EELDPERIGVVIGSGIGGLATIEEAYR 117

Query: 190 AIK-VSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIK 248
           A+     +++SPF++P +L NMA+  +A+ LG  GP+Y++STACAS  ++I +A   I  
Sbjct: 118 ALLEKGPRRVSPFFVPMALPNMAAGQVAIRLGLRGPNYTVSTACASGAHAIGDAARLIRL 177

Query: 249 GDT 251
           G  
Sbjct: 178 GRA 180

KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. Length = 406

>gnl|CDD|200247 TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II

 Score =  190 bits (486), Expect = 2e-58
 Identities = 74/182 (40%), Positives = 114/182 (62%), Gaps = 4/182 (2%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           RR+VVTGLGAVTPLG+    F  +LL G +GI  I  FD S+ P +IA E+K      +I
Sbjct: 1   RRVVVTGLGAVTPLGNGVEEFWENLLAGKSGIGPITRFDASDLPVKIAGEVKDFDPEDYI 60

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K A++ D+++ YAL A K+A+ D+G+  +   E D  R GVIIGS +GGL  + +   
Sbjct: 61  DKKEARRMDRFIQYALAAAKEAVEDSGLDIE---EEDAERVGVIIGSGIGGLETIEEQHI 117

Query: 190 AIKVS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIK 248
            +     +++SPF+IP S+ NMA+  +++  G  GP++++ TACA+  ++I +A   I +
Sbjct: 118 VLLEKGPRRVSPFFIPMSIINMAAGQISIRYGAKGPNHAVVTACATGTHAIGDAFRLIQR 177

Query: 249 GD 250
           GD
Sbjct: 178 GD 179

3-oxoacyl-[acyl-carrier-protein] synthase 2 (KAS-II, FabF) is involved in the condensation step of fatty acid biosynthesis in which the malonyl donor group is decarboxylated and the resulting carbanion used to attack and extend the acyl group attached to the acyl carrier protein. Most genomes encoding fatty acid biosynthesis contain a number of condensing enzymes, often of all three types: 1, 2 and 3. Synthase 2 is mechanistically related to synthase 1 (KAS-I, FabB) containing a number of absolutely conserved catalytic residues in common. This model is based primarily on genes which are found in apparent operons with other essential genes of fatty acid biosynthesis (GenProp0681). The large gap between the trusted cutoff and the noise cutoff contains many genes which are not found adjacent to genes of the fatty acid pathway in genomes that often also contain a better hit to this model. These genes may be involved in other processes such as polyketide biosyntheses. Some genomes contain more than one above-trusted hit to this model which may result from recent paralogous expansions. Second hits to this model which are not next to other fatty acid biosynthesis genes may be involved in other processes. FabB sequences should fall well below the noise cutoff of this model [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 407

>gnl|CDD|235781 PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score =  180 bits (458), Expect = 4e-54
 Identities = 62/190 (32%), Positives = 100/190 (52%), Gaps = 11/190 (5%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLST---- 125
           +RIVVTG+GAV+PLG     F   LL G +GI  +  F   +  T+I  ++  L+     
Sbjct: 4   KRIVVTGMGAVSPLGCGVETFWQRLLAGQSGIRTLTDFPVGDLATKIGGQVPDLAEDAEA 63

Query: 126 ----GGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGL 181
                 ++ PK  +K D+++++A+ A K+AL  AG         D+ R   IIGS +GG 
Sbjct: 64  GFDPDRYLDPKDQRKMDRFILFAMAAAKEALAQAGWDPD--TLEDRERTATIIGSGVGGF 121

Query: 182 RVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSIL 240
             + +    +     +++SPF IP  LTNMA+  +++  G+ GP  +  TACA+   +I 
Sbjct: 122 PAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYGFKGPLGAPVTACAAGVQAIG 181

Query: 241 NATSHIIKGD 250
           +A   I  G+
Sbjct: 182 DAARLIRSGE 191

Length = 424

>gnl|CDD|235987 PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score =  173 bits (440), Expect = 1e-51
 Identities = 70/182 (38%), Positives = 112/182 (61%), Gaps = 4/182 (2%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           RR+VVTGLGAV+PLG+D      +LL G +GI  I  FD S+   +IA E+K  +   ++
Sbjct: 2   RRVVVTGLGAVSPLGNDVESTWKNLLAGKSGIGPITHFDTSDLAVKIAGEVKDFNPDDYM 61

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
           S K A++ D+++ Y + A K+A+ DAG+      E +  R GVIIGS +GGL  + +   
Sbjct: 62  SRKEARRMDRFIQYGIAAAKQAVEDAGLEIT---EENADRIGVIIGSGIGGLETIEEQHI 118

Query: 190 AIKVS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIK 248
            +     +++SPF++P ++ NMA+  +++  G  GP++SI TACA+  ++I +A   I  
Sbjct: 119 TLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGAKGPNHSIVTACATGAHAIGDAARLIAY 178

Query: 249 GD 250
           GD
Sbjct: 179 GD 180

Length = 411

>gnl|CDD|223381 COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]

 Score =  153 bits (388), Expect = 5e-44
 Identities = 67/183 (36%), Positives = 99/183 (54%), Gaps = 7/183 (3%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           RR+V+TGLG V+ LG+       +LL G +GI  I  FD S    +IA EIK L     I
Sbjct: 3   RRVVITGLGIVSSLGNGVEEVWAALLAGKSGIRPITRFDASGLGVKIAGEIKDLDD--QI 60

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
           + K  +  D++   A+VA  +AL DAG+           R GV IGS +GGL  +    +
Sbjct: 61  AKKERRFMDRFSQLAVVAAVEALEDAGLDN---ELNVDMRVGVAIGSGIGGLEDIEFDLD 117

Query: 190 AI--KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
           A+  +   K++SPF +P  L N+A+  +A+  G  GP+Y+  TACA+  ++I +A   I 
Sbjct: 118 ALLLEGLRKRISPFLVPKMLPNLAAGNVAIVFGLKGPNYTPVTACATGAHAIGDAVRLIR 177

Query: 248 KGD 250
            G 
Sbjct: 178 LGK 180

Length = 412

>gnl|CDD|236265 PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score =  128 bits (323), Expect = 1e-34
 Identities = 65/185 (35%), Positives = 99/185 (53%), Gaps = 12/185 (6%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           +R+VVTG+G +  LG +      ++  G  GI  I  FD S+FP +IA EI        +
Sbjct: 2   KRVVVTGIGMINSLGLNKESSFKAICNGECGIKKITLFDASDFPVQIAGEITDFDPTEVM 61

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
            PK  KKAD+++   L A ++A+ DAG   +   ELD  R GV   S +GGL  +    E
Sbjct: 62  DPKEVKKADRFIQLGLKAAREAMKDAGFLPE---ELDAERFGVSSASGIGGLPNI----E 114

Query: 190 AIKVSY-----KKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATS 244
              +       +K+SPF+IP +L NM    ++++ G  GP+ S  TACA+  ++I+ A  
Sbjct: 115 KNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGLKGPNLSSVTACAAGTHAIIEAVK 174

Query: 245 HIIKG 249
            I+ G
Sbjct: 175 TIMLG 179

Length = 406

>gnl|CDD|215723 pfam00109, ketoacyl-synt, Beta-ketoacyl synthase, N-terminal domain

 Score =  123 bits (311), Expect = 3e-34
 Identities = 55/190 (28%), Positives = 85/190 (44%), Gaps = 18/190 (9%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEF--PTRIAAEIKSLSTGG 127
             + +TG+G   P G     F   LL G   I +    D S    P+R+A EI       
Sbjct: 2   EPVAITGMGCRFPGGVGPEEFWELLLAGRDAIREFPA-DLSGLYPPSRVAGEIYGFDFDA 60

Query: 128 W---ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSR-CGVIIGSAMGG--- 180
               ISP+ A+  D     AL A  +AL DAG+       L  S   GV +GS  G    
Sbjct: 61  AFFGISPREAEAMDPQQRLALEAAWEALEDAGLDPA---SLRGSDRTGVFVGSGSGDYAE 117

Query: 181 LRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSIL 240
           L+ L+          +++SP+     + ++A+  ++  LG  GPS ++ TAC+SS  ++ 
Sbjct: 118 LQALDSA-----GGPRRVSPYLTGAWMPSVAAGRISYRLGLRGPSVTVDTACSSSLVALH 172

Query: 241 NATSHIIKGD 250
            A   I +G+
Sbjct: 173 AAVRSIRRGE 182

The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. The N-terminal domain contains most of the structures involved in dimer formation and also the active site cysteine. Length = 243

>gnl|CDD|181539 PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score =  123 bits (311), Expect = 5e-33
 Identities = 67/183 (36%), Positives = 112/183 (61%), Gaps = 4/183 (2%)

Query: 69  ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
           +RR+VVTG+G ++P+G+       +LL G +GI +I+ FD + F TR A  +K  +   +
Sbjct: 3   KRRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKDFNCEEY 62

Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGF 188
           +S K A+K D ++ Y + AG +AL D+G+      E +  R GV IGS +GGL ++  G 
Sbjct: 63  MSKKDARKMDLFIQYGIAAGIQALDDSGLE---VTEENAHRIGVAIGSGIGGLGLIEAGH 119

Query: 189 EA-IKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
           +A ++   +K+SPF++P ++ NM +  L++  G  GP+ +ISTAC +  ++I +A   I 
Sbjct: 120 QALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARMIA 179

Query: 248 KGD 250
            GD
Sbjct: 180 YGD 182

Length = 414

>gnl|CDD|240245 PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein synthase; Provisional

 Score =  110 bits (276), Expect = 6e-28
 Identities = 56/189 (29%), Positives = 87/189 (46%), Gaps = 20/189 (10%)

Query: 79  AVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSE----------------FPTRIAAEIKS 122
            VTPLG  A     +L+ G +GI  +  F                     P +IAAE+  
Sbjct: 1   VVTPLGVGAESTWEALIAGKSGIRKLTEFPKFLPDCIPEQKALENLVAAMPCQIAAEVDQ 60

Query: 123 LSTGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLR 182
                       K+  +   +A+ A ++AL DA +   +  E D+ R GV IGS +G L 
Sbjct: 61  SEFDPSDFAP-TKRESRATHFAMAAAREALADAKL--DILSEKDQERIGVNIGSGIGSLA 117

Query: 183 VLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILN 241
            L D  + + +  + ++SP++IP  L NMA+ ++A+     GPS S  TACA+  + I  
Sbjct: 118 DLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKHKLKGPSGSAVTACATGAHCIGE 177

Query: 242 ATSHIIKGD 250
           A   I  G+
Sbjct: 178 AFRWIKYGE 186

Length = 421

>gnl|CDD|215449 PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protein] synthase

 Score = 97.9 bits (244), Expect = 2e-23
 Identities = 61/204 (29%), Positives = 101/204 (49%), Gaps = 30/204 (14%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGI--------------SDIQGFDCSEFPTR 115
           RR+VVTGLG VTPLG         L+ G  G+               + Q +   + P+R
Sbjct: 6   RRVVVTGLGLVTPLGCGVETTWRRLIAGECGVRALTQDDLKMKSEDEETQLYTLDQLPSR 65

Query: 116 IAAEIKSLSTGG------WISPKIAKKADKYLIYALVAGKKALVDA--GITEQVSGELDK 167
           +AA +   +  G      W++   ++ + +++ YAL A  +AL DA    +E       K
Sbjct: 66  VAALVPRGTGPGDFDEELWLN---SRSSSRFIGYALCAADEALSDARWLPSEDE----AK 118

Query: 168 SRCGVIIGSAMGGLR-VLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSY 226
            R GV IG  +G +  +L       +   +++SPF++P  L NMA+  +++  G+ GP++
Sbjct: 119 ERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYGFQGPNH 178

Query: 227 SISTACASSNYSILNATSHIIKGD 250
           +  TACA+  +SI +A   I  GD
Sbjct: 179 AAVTACATGAHSIGDAFRMIQFGD 202

Length = 437

>gnl|CDD|238424 cd00828, elong_cond_enzymes, "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases

 Score = 94.0 bits (234), Expect = 4e-22
 Identities = 59/189 (31%), Positives = 91/189 (48%), Gaps = 19/189 (10%)

Query: 70  RRIVVTGLGAVTPLGDDAHL---FHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTG 126
            R+V+TG+G V+P G+       F  +L EG +GI+ +     S F   +A +I      
Sbjct: 1   SRVVITGIGVVSPHGEGCDEVEEFWEALREGRSGIAPVARLK-SRFDRGVAGQIP----T 55

Query: 127 GWISPKIAKK---ADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRV 183
           G I    AK+    D+  + ALVA ++AL DAGIT     E+  S  GV++GS MGGLR 
Sbjct: 56  GDIPGWDAKRTGIVDRTTLLALVATEEALADAGIT--DPYEVHPSEVGVVVGSGMGGLRF 113

Query: 184 LNDGFEAIKVSYKKMSPFYIPY--SLTNMASAVLAMDL-GWTGPSYSISTACASSNYSIL 240
           L  G +      + ++P+  P      N  +  + + L    GP  +   ACA++  ++ 
Sbjct: 114 LRRGGKLD---ARAVNPYVSPKWMLSPNTVAGWVNILLLSSHGPIKTPVGACATALEALD 170

Query: 241 NATSHIIKG 249
            A   I  G
Sbjct: 171 LAVEAIRSG 179

They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues. Length = 407

>gnl|CDD|181184 PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed

 Score = 90.9 bits (226), Expect = 4e-21
 Identities = 59/180 (32%), Positives = 95/180 (52%), Gaps = 8/180 (4%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           RR+V+TGLG V+ +G++      SL EG +GI+    F      +++   +K L   G I
Sbjct: 2   RRVVITGLGIVSSIGNNQQEVLASLREGRSGITFSPEFAEMGMRSQVWGNVK-LDPTGLI 60

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITE-QVSGELDKSRCGVIIGSAMGGLRVLNDGF 188
             K+ +       YA +A ++A+ DAG++E QVS      R G+I GS  G  R   +  
Sbjct: 61  DRKVMRFMGDASAYAYLAMEQAIADAGLSEEQVSNP----RTGLIAGSGGGSTRNQVEAA 116

Query: 189 EAIK--VSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHI 246
           +A++     K++ P+ +  ++ +  SA LA      G +YSIS+ACA+S + I NA   I
Sbjct: 117 DAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKIKGVNYSISSACATSAHCIGNAVEQI 176

Length = 406

>gnl|CDD|236129 PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score = 69.4 bits (170), Expect = 1e-13
 Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 17/186 (9%)

Query: 72  IVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEF--PTRIAAEIKSLSTGGWI 129
           +VVTG+   T L  DA      LL+G +GI  +      EF  P RI   +         
Sbjct: 14  VVVTGIAMTTALATDAETTWKLLLDGQSGIRTLDDPFVEEFDLPVRIGGHLLEEF----- 68

Query: 130 SPKIAKKADKYLIY----ALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLN 185
             ++ +   + + Y    + V G++   +AG     S E+D +R  V IG+ +G    L 
Sbjct: 69  DHQLTRVELRRMSYLQRMSTVLGRRVWENAG-----SPEVDTNRLMVSIGTGLGSAEELV 123

Query: 186 DGFEAIKV-SYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATS 244
             ++ ++    + +SP  +   + N  +A + ++        +  +ACAS + +I  A  
Sbjct: 124 FAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAKAGVITPVSACASGSEAIAQAWR 183

Query: 245 HIIKGD 250
            I+ G+
Sbjct: 184 QIVLGE 189

Length = 418

>gnl|CDD|238428 cd00832, CLF, Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria

 Score = 68.9 bits (169), Expect = 2e-13
 Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 3/112 (2%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           RR VVTG+G V P G     +  ++L+G +G+  I  FD S +P R+A E+        +
Sbjct: 1   RRAVVTGIGVVAPNGLGVEEYWKAVLDGRSGLGPITRFDPSGYPARLAGEVPDFDAAEHL 60

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGL 181
             ++  + D+    AL A   AL DAG+       L     GV+  SA GG 
Sbjct: 61  PGRLLPQTDRMTRLALAAADWALADAGVDPA---ALPPYDMGVVTASAAGGF 109

CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine. Length = 399

>gnl|CDD|238429 cd00833, PKS, polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations

 Score = 68.4 bits (168), Expect = 3e-13
 Identities = 42/184 (22%), Positives = 69/184 (37%), Gaps = 31/184 (16%)

Query: 71  RIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDI--QGFDCSEFPTRIAAEIKSLSTGGW 128
            I + G+    P   D   F  +LLEG   IS+I    +D   +        K+ +  G 
Sbjct: 2   PIAIVGMACRFPGAADPDEFWENLLEGRDAISEIPEDRWDADGYYPDPGKPGKTYTRRGG 61

Query: 129 --------------ISPKIAKKAD---KYLIYALVAGKKALVDAGITEQVSGELDKSRCG 171
                         ISP+ A+  D   + L   L    +AL DAG + +    L  SR G
Sbjct: 62  FLDDVDAFDAAFFGISPREAEAMDPQQRLL---LEVAWEALEDAGYSPE---SLAGSRTG 115

Query: 172 VIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTA 231
           V +G++      L            ++  +    +     +  ++      GPS ++ TA
Sbjct: 116 VFVGASSSDYLELLARDPD------EIDAYAATGTSRAFLANRISYFFDLRGPSLTVDTA 169

Query: 232 CASS 235
           C+SS
Sbjct: 170 CSSS 173

PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. Length = 421

>gnl|CDD|180839 PRK07103, PRK07103, polyketide beta-ketoacyl:acyl carrier protein synthase; Validated

 Score = 59.7 bits (145), Expect = 3e-10
 Identities = 43/184 (23%), Positives = 73/184 (39%), Gaps = 21/184 (11%)

Query: 71  RIVVTGLGAVTPLGDDAHLFHTSLLEGVTGI--------SDIQGFDCSEFPTRIAAEIKS 122
            +VVTG+G V+ +G     F  +LL G                          I AE+ S
Sbjct: 3   EVVVTGVGVVSAIGQGRPSFAAALLAGRHAFGVMRRPGRQVPDDAGAGLASAFIGAELDS 62

Query: 123 LSTGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLR 182
           L+    +  K+ ++A      AL A ++A  DA +     G +D  R G+++G +    R
Sbjct: 63  LALPERLDAKLLRRASLSAQAALAAAREAWRDAAL-----GPVDPDRIGLVVGGSNLQQR 117

Query: 183 VLNDGFEAIKVSYKKMSPFYIP-YSLTNMAS---AVLAMDLGWTGPSYSISTACASSNYS 238
                 E     Y+    F  P Y L+ M +    + +   G  G  +++  A AS   +
Sbjct: 118 EQALVHET----YRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIRGEGFTVGGASASGQLA 173

Query: 239 ILNA 242
           ++ A
Sbjct: 174 VIQA 177

Length = 410

>gnl|CDD|225858 COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]

 Score = 57.5 bits (139), Expect = 2e-09
 Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 24/139 (17%)

Query: 101 ISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQ 160
           + D+  FD   F                ISP+ A+  D      L    +AL DAGI   
Sbjct: 67  LDDVDDFDALFFG---------------ISPREAEAMDPQQRLLLEVAWEALEDAGIYP- 110

Query: 161 VSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG 220
               L  S  GV  G+++    +L    +  +  Y          + +++A+  ++  LG
Sbjct: 111 --DSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITG------NSSSVAAGRISYVLG 162

Query: 221 WTGPSYSISTACASSNYSI 239
            +GPS ++ TAC+SS  ++
Sbjct: 163 LSGPSVTVDTACSSSLVAV 181

Length = 1061

>gnl|CDD|181657 PRK09116, PRK09116, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score = 50.8 bits (122), Expect = 2e-07
 Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 3/111 (2%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDC-SEFPTRIAAEIKSLSTGGW 128
           RR+VVTG+G VT LG+D       L  G   +  +  +D      TR+AA I        
Sbjct: 2   RRVVVTGMGGVTALGEDWQTIAARLKAGRNAVRRMPEWDRYDGLNTRLAAPIDDFELPAH 61

Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMG 179
            + K  +   +  + A  A + AL DAG+       L   R G+  GS+ G
Sbjct: 62  YTRKKIRSMGRVSLMATRASELALEDAGLLGDPI--LTDGRMGIAYGSSTG 110

Length = 405

>gnl|CDD|238421 cd00825, decarbox_cond_enzymes, decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction

 Score = 48.8 bits (116), Expect = 1e-06
 Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 7/101 (6%)

Query: 142 IYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPF 201
           I    A ++A+ DAG++ +          GV++G+  G  R    G +A++     + P+
Sbjct: 13  ILGFEAAERAIADAGLSREY---QKNPIVGVVVGTGGGSPRFQVFGADAMR----AVGPY 65

Query: 202 YIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNA 242
            +  ++   AS  +A  LG  GP+Y +S ACA S +++  A
Sbjct: 66  VVTKAMFPGASGQIATPLGIHGPAYDVSAACAGSLHALSLA 106

Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). Length = 332

>gnl|CDD|235653 PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score = 47.4 bits (113), Expect = 3e-06
 Identities = 47/179 (26%), Positives = 70/179 (39%), Gaps = 38/179 (21%)

Query: 71  RIVVTGLGAVTPLGDDAHLFHT--SLLEGVTGISDIQGFDCSEFPTR----IAAEIKSLS 124
           ++VVTG+G V+ LGD   L  +   LL+G +GI   Q F   E P      I  +  SL 
Sbjct: 3   KVVVTGIGLVSALGD---LEQSWQRLLQGKSGIKLHQPF--PELPPLPLGLIGNQPSSLE 57

Query: 125 TGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVL 184
                           L   +V    AL DAG+T  +      + CGV+IGS+ G     
Sbjct: 58  D---------------LTKTVV--TAALKDAGLTPPL------TDCGVVIGSSRGCQGQW 94

Query: 185 NDGFEAIKVSYKKMSPFYIP----YSLTNMASAVLAMDLGWTGPSYSISTACASSNYSI 239
                 +                  +L + A+   A  +G  GP  +   ACA+  ++I
Sbjct: 95  EKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQGPVLAPMAACATGLWAI 153

Length = 381

>gnl|CDD|235817 PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 7/97 (7%)

Query: 62  TKHKEPKERRIV-VTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEI 120
           T +++   R IV VTG+G VT LG        +L  G +GI  I  F      TRIA  +
Sbjct: 2   TAYRDHLGRPIVAVTGMGVVTSLGQGKADNWAALTAGESGIHTITRFPTEGLRTRIAGTV 61

Query: 121 KSLSTGGWISPKIAKKADKYLIYALVAGKKALVDAGI 157
             L    + +  +++        A +A ++AL  AGI
Sbjct: 62  DFLPESPFGASALSEA------LARLAAEEALAQAGI 92

Length = 425

>gnl|CDD|236398 PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed

 Score = 40.2 bits (95), Expect = 6e-04
 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 4/32 (12%)

Query: 204 PYSLTNMASAVLAMDLGWTGPSYSISTACASS 235
             SL +   A L    G +GP+Y+ISTAC+SS
Sbjct: 136 LGSLADFLRAYL----GLSGPAYTISTACSSS 163

Length = 392

>gnl|CDD|173154 PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protein) synthase II; Provisional

 Score = 38.6 bits (89), Expect = 0.002
 Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 16/100 (16%)

Query: 167 KSRCGVIIGSAMGGLRVLNDGFEAIKVS----YKKMSPFYIPYSLTNMASAVLAMDLGWT 222
           + R   IIG+ +GG   +     A++ S     K++SPF +P  L N+A+  +++   + 
Sbjct: 25  QERTATIIGAGIGGFPAIA---HAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFK 81

Query: 223 GPSYSISTACASSNYSILNATSHIIKGDTVSNSPSSQADI 262
           GP  +  TACA+   +I         GD V    +++AD+
Sbjct: 82  GPIGAPVTACAAGVQAI---------GDAVRMIRNNEADV 112

Length = 342

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	263
PLN02787	540	3-oxoacyl-[acyl-carrier-protein] synthase II	100.0
PRK08722	414	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
COG3321	1061	Polyketide synthase modules and related proteins [	100.0
PRK06333	424	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
PRK07314	411	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
cd00832	399	CLF Chain-length factor (CLF) is a factor required	100.0
KOG1394	440	consensus 3-oxoacyl-(acyl-carrier-protein) synthas	100.0
PRK09116	405	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
PRK08439	406	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
PF00109	254	ketoacyl-synt: Beta-ketoacyl synthase, N-terminal	100.0
TIGR03150	407	fabF beta-ketoacyl-acyl-carrier-protein synthase I	100.0
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	100.0
PRK07910	418	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
PRK07967	406	3-oxoacyl-(acyl carrier protein) synthase I; Revie	100.0
PLN02836	437	3-oxoacyl-[acyl-carrier-protein] synthase	100.0
PRK07103	410	polyketide beta-ketoacyl:acyl carrier protein synt	100.0
cd00834	406	KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP)	100.0
PRK06519	398	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
COG0304	412	FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li	100.0
cd00828	407	elong_cond_enzymes "elongating" condensing enzymes	100.0
cd00833	421	PKS polyketide synthases (PKSs) polymerize simple	99.97
PTZ00050	421	3-oxoacyl-acyl carrier protein synthase; Provision	99.97
smart00825	424	PKS_KS Beta-ketoacyl synthase. The structure of be	99.97
PRK05952	381	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.96
PRK09185	392	3-oxoacyl-(acyl carrier protein) synthase I; Revie	99.96
PRK06501	425	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.95
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.95
PRK14691	342	3-oxoacyl-(acyl carrier protein) synthase II; Prov	99.87
PRK06147	348	3-oxoacyl-(acyl carrier protein) synthase; Validat	99.61
cd00825	332	decarbox_cond_enzymes decarboxylating condensing e	99.6
PF13723	218	Ketoacyl-synt_2: Beta-ketoacyl synthase, N-termina	99.2
cd00327	254	cond_enzymes Condensing enzymes; Family of enzymes	99.15
PF00108	264	Thiolase_N: Thiolase, N-terminal domain; InterPro:	99.11
COG0332	323	FabH 3-oxoacyl-[acyl-carrier-protein]	99.11
PRK06633	392	acetyl-CoA acetyltransferase; Provisional	99.1
PRK09352	319	3-oxoacyl-(acyl carrier protein) synthase III; Rev	99.08
PRK08963	428	fadI 3-ketoacyl-CoA thiolase; Reviewed	99.06
PRK08131	401	acetyl-CoA acetyltransferase; Provisional	99.04
PRK07515	372	3-oxoacyl-(acyl carrier protein) synthase III; Rev	99.02
PRK06205	404	acetyl-CoA acetyltransferase; Provisional	99.02
PRK09051	394	beta-ketothiolase; Provisional	99.01
PRK07108	392	acetyl-CoA acetyltransferase; Provisional	98.98
PRK13359	400	beta-ketoadipyl CoA thiolase; Provisional	98.98
PRK06954	397	acetyl-CoA acetyltransferase; Provisional	98.98
PRK09268	427	acetyl-CoA acetyltransferase; Provisional	98.97
TIGR02446	430	FadI fatty oxidation complex, beta subunit FadI. T	98.95
TIGR00747	318	fabH 3-oxoacyl-(acyl-carrier-protein) synthase III	98.95
PRK07850	387	acetyl-CoA acetyltransferase; Provisional	98.93
PRK09052	399	acetyl-CoA acetyltransferase; Provisional	98.93
PRK09258	338	3-oxoacyl-(acyl carrier protein) synthase III; Rev	98.92
PRK09050	401	beta-ketoadipyl CoA thiolase; Validated	98.92
PLN02287	452	3-ketoacyl-CoA thiolase	98.91
PRK07204	329	3-oxoacyl-(acyl carrier protein) synthase III; Rev	98.89
PRK06504	390	acetyl-CoA acetyltransferase; Provisional	98.88
PRK08242	402	acetyl-CoA acetyltransferase; Validated	98.87
PRK06064	389	acetyl-CoA acetyltransferase; Provisional	98.86
PRK06059	399	lipid-transfer protein; Provisional	98.83
PRK06366	388	acetyl-CoA acetyltransferase; Provisional	98.81
cd00830	320	KAS_III Ketoacyl-acyl carrier protein synthase III	98.8
PRK08256	391	lipid-transfer protein; Provisional	98.8
PRK12578	385	acetyl-CoA acetyltransferase; Provisional	98.8
PRK05656	393	acetyl-CoA acetyltransferase; Provisional	98.8
PRK06157	398	acetyl-CoA acetyltransferase; Validated	98.79
PRK12879	325	3-oxoacyl-(acyl carrier protein) synthase III; Rev	98.78
cd00751	386	thiolase Thiolase are ubiquitous enzymes that cata	98.77
PRK08170	426	acetyl-CoA acetyltransferase; Provisional	98.74
PRK06816	378	3-oxoacyl-(acyl carrier protein) synthase III; Rev	98.72
PRK04262	347	hypothetical protein; Provisional	98.72
CHL00203	326	fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr	98.7
cd00829	375	SCP-x_thiolase Thiolase domain associated with ste	98.69
TIGR00748	345	HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase	98.69
PRK07851	406	acetyl-CoA acetyltransferase; Provisional	98.67
PTZ00455	438	3-ketoacyl-CoA thiolase; Provisional	98.66
PRK08235	393	acetyl-CoA acetyltransferase; Provisional	98.66
TIGR01930	386	AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi	98.66
PLN02326	379	3-oxoacyl-[acyl-carrier-protein] synthase III	98.65
PLN02644	394	acetyl-CoA C-acetyltransferase	98.65
PRK07661	391	acetyl-CoA acetyltransferase; Provisional	98.64
PLN03172	393	chalcone synthase family protein; Provisional	98.62
PLN03169	391	chalcone synthase family protein; Provisional	98.62
PRK12880	353	3-oxoacyl-(acyl carrier protein) synthase III; Rev	98.62
PRK06840	339	hypothetical protein; Validated	98.61
TIGR02430	400	pcaF beta-ketoadipyl CoA thiolase. Members of this	98.61
TIGR02845	327	spore_V_AD stage V sporulation protein AD. Bacillu	98.6
PRK05790	393	putative acyltransferase; Provisional	98.6
PRK07516	389	acetyl-CoA acetyltransferase; Provisional	98.6
PLN03168	389	chalcone synthase; Provisional	98.59
PRK05963	326	3-oxoacyl-(acyl carrier protein) synthase II; Revi	98.58
PRK07801	382	acetyl-CoA acetyltransferase; Provisional	98.58
PRK08313	386	acetyl-CoA acetyltransferase; Provisional	98.56
PRK06445	394	acetyl-CoA acetyltransferase; Provisional	98.54
cd00827	324	init_cond_enzymes "initiating" condensing enzymes	98.54
cd00826	393	nondecarbox_cond_enzymes nondecarboxylating conden	98.54
PRK08304	337	stage V sporulation protein AD; Validated	98.53
PRK06365	430	acetyl-CoA acetyltransferase; Provisional	98.53
PLN03170	401	chalcone synthase; Provisional	98.52
PRK06065	392	acetyl-CoA acetyltransferase; Provisional	98.52
PRK06289	403	acetyl-CoA acetyltransferase; Provisional	98.5
cd00831	361	CHS_like Chalcone and stilbene synthases; plant-sp	98.46
PRK08947	387	fadA 3-ketoacyl-CoA thiolase; Reviewed	98.46
PLN03173	391	chalcone synthase; Provisional	98.45
PLN03171	399	chalcone synthase-like protein; Provisional	98.43
TIGR02445	385	fadA fatty oxidation complex, beta subunit FadA. T	98.43
PRK06158	384	thiolase; Provisional	98.41
PRK12404	334	stage V sporulation protein AD; Provisional	98.39
PRK06025	417	acetyl-CoA acetyltransferase; Provisional	98.23
PRK06690	361	acetyl-CoA acetyltransferase; Provisional	98.22
PLN02192	511	3-ketoacyl-CoA synthase	98.21
PRK08142	388	acetyl-CoA acetyltransferase; Provisional	98.16
PLN02577	459	hydroxymethylglutaryl-CoA synthase	98.11
PRK07855	386	lipid-transfer protein; Provisional	98.1
PLN02377	502	3-ketoacyl-CoA synthase	98.05
PLN02854	521	3-ketoacyl-CoA synthase	98.05
COG0183	392	PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis	98.02
PRK08257	498	acetyl-CoA acetyltransferase; Validated	98.0
PLN02932	478	3-ketoacyl-CoA synthase	97.97
TIGR01835	379	HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt	97.95
KOG1406	408	consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44	97.85
PRK06066	385	acetyl-CoA acetyltransferase; Provisional	97.83
KOG1390	396	consensus Acetyl-CoA acetyltransferase [Lipid tran	97.73
TIGR01833	454	HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth	97.71
PLN00415	466	3-ketoacyl-CoA synthase	97.37
PF08392	290	FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-	97.27
PRK07937	352	lipid-transfer protein; Provisional	97.11
COG3425	377	PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi	96.61
PF08545	80	ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)	96.42
PF01154	174	HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s	96.31
KOG1389	435	consensus 3-oxoacyl CoA thiolase [Lipid transport	95.95
PF00195	226	Chal_sti_synt_N: Chalcone and stilbene synthases,	95.74
KOG1391	396	consensus Acetyl-CoA acetyltransferase [Lipid tran	94.74
PF07451	329	SpoVAD: Stage V sporulation protein AD (SpoVAD); I	94.42
KOG1392	465	consensus Acetyl-CoA acetyltransferase [Lipid tran	93.88
COG3424	356	BcsA Predicted naringenin-chalcone synthase [Secon	90.37

>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II

Probab=100.00  E-value=3.2e-39  Score=304.07  Aligned_cols=230  Identities=56%  Similarity=0.980  Sum_probs=193.0

Q ss_pred             ccccccccccccCCccccccccccchhhhhccCCCCCCCcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCCCCC
Q 024765           32 SKRHKKLISRCNFGKTVAMSDAQSEKDLIITKHKEPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSE  111 (263)
Q Consensus        32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~~~~  111 (263)
                      ++++.+..+....++..++. .+|.........+.+.+++|||||||+++|.|.++++||++|++|+++|+++++|+...
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~rVvITG~G~vtp~G~~~~~~w~~L~~G~s~i~~~~~f~~~~  170 (540)
T PLN02787         92 NRNQRRRNRAARSGKAMAVA-VQPEKEVETKKKPLTKQRRVVVTGMGVVSPLGHDPDVFYNNLLEGVSGISEIERFDCSQ  170 (540)
T ss_pred             ccccccccccCCCcccceec-cCcccccccccCCCCCCCCEEEEeeEEECCCCCCHHHHHHHHHcCCCcccccCccchhh
Confidence            34456666666667666554 34432222222222345799999999999999999999999999999999999999889


Q ss_pred             CCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHH
Q 024765          112 FPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI  191 (263)
Q Consensus       112 ~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~  191 (263)
                      ++.+++|++++|++..++++++.+.||+++++++.++++||+|||+.++..+.+++.|+|||+|++.++...+++++..+
T Consensus       171 ~~~~~ag~i~~f~~~~~l~~k~~r~md~~~~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l  250 (540)
T PLN02787        171 FPTRIAGEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEAL  250 (540)
T ss_pred             CCccccccccccChhhcCCHHHHHhCCHHHHHHHHHHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHH
Confidence            99999999999999888999999999999999999999999999997532234677899999999999988877777776


Q ss_pred             HhccCCCCCcccccccchHHHHHHHHHhCCCCccccccccchHHHHHHHHHHHHHHhcccceE-eeccCCCC
Q 024765          192 KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQADI  262 (263)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~~i  262 (263)
                      .....+++|+.++..+.|..+++|++.||++||+++|++||+||+.||+.|+++|++|+||++ ++|+|..+
T Consensus       251 ~~~~~~~~p~~~~~~~~n~~a~~ia~~~gl~Gp~~tistACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l  322 (540)
T PLN02787        251 RISYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAAI  322 (540)
T ss_pred             hhccccCCcchhhhhcccHHHHHHHHHhCCCCCccccccccccHHHHHHHHHHHHHcCCCCEEEEecccccc
Confidence            556667888888888899999999999999999999999999999999999999999999955 67777654

>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=5.8e-39  Score=295.86  Aligned_cols=192  Identities=35%  Similarity=0.610  Sum_probs=176.7

Q ss_pred             CCCcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHH
Q 024765           68 KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVA  147 (263)
Q Consensus        68 ~~~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~a  147 (263)
                      ..++|||||||+++|.|.++++||++|++|+++|+++++|+...++.+++|++++||+.+|+++++.+.||+++++++.+
T Consensus         2 ~~~~VvItG~g~~~p~g~~~~~~w~~L~~g~s~i~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~d~~~~~~l~a   81 (414)
T PRK08722          2 SKRRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKDFNCEEYMSKKDARKMDLFIQYGIAA   81 (414)
T ss_pred             CCCCEEEEeeEEECCCCCCHHHHHHHHHhCCCeeeecCccccccCCCceeEEcCCCChhHcCCHHHHhhcCHHHHHHHHH
Confidence            45789999999999999999999999999999999999999989999999999999998889999999999999999999


Q ss_pred             HHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCccc
Q 024765          148 GKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSY  226 (263)
Q Consensus       148 a~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~  226 (263)
                      +++||+||||.+.   +....|+|||+|++.+++...++++..+ ..+...++++.++..+.|.++++|+++||++||++
T Consensus        82 ~~~Al~dAGl~~~---~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl~Gp~~  158 (414)
T PRK08722         82 GIQALDDSGLEVT---EENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNI  158 (414)
T ss_pred             HHHHHHHcCCCcc---ccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCCCCCcc
Confidence            9999999999743   3567899999999999999888888777 66677889999999999999999999999999999


Q ss_pred             cccccchHHHHHHHHHHHHHHhcccceE-eeccCCCC
Q 024765          227 SISTACASSNYSILNATSHIIKGDTVSN-SPSSQADI  262 (263)
Q Consensus       227 tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~~i  262 (263)
                      +|++||+||+.||++|+++|++|+||++ |+|+|..+
T Consensus       159 ti~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~  195 (414)
T PRK08722        159 AISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKAS  195 (414)
T ss_pred             ccccccHHHHHHHHHHHHHHHcCCCCEEEEecccccC
Confidence            9999999999999999999999999965 66666544

>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=100.00  E-value=1.6e-39  Score=326.54  Aligned_cols=181  Identities=24%  Similarity=0.300  Sum_probs=159.6

Q ss_pred             cEEEEecceeCCcCCCHHHHHHHHHcCCCceeeC--CCCCCCCC-----------CceeEEecCC---CCCCCC-CCHHH
Q 024765           71 RIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDI--QGFDCSEF-----------PTRIAAEIKS---LSTGGW-ISPKI  133 (263)
Q Consensus        71 ~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~--~~~~~~~~-----------~~~~~g~i~~---fd~~~~-i~~~~  133 (263)
                      +|+|+||+|+||+++++++||++|.+|+++|+++  +||+...+           +.++||++++   ||+.|| |+|+|
T Consensus         5 ~IAIiGm~~rfPga~~~~~~W~~l~~g~~~i~~ip~~rwd~~~~~~~~~~~~gk~~~~~ggfl~~~~~FD~~fFgisPrE   84 (1061)
T COG3321           5 PIAIIGMACRFPGADSPEEFWDLLKEGRDEITEVPADRWDVDAYYDPDPTVPGKSYSRWGGFLDDVDDFDALFFGISPRE   84 (1061)
T ss_pred             cEEEEeccccCCCCCCHHHHHHHHhcCCceeeecChhhhhHhhccCCccccccccccccccccCCccccCHHHcCCCHHH
Confidence            3999999999999999999999999999999999  68876654           5689999874   999999 99999


Q ss_pred             HhhcCHHHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHH
Q 024765          134 AKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASA  213 (263)
Q Consensus       134 ~~~~d~~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  213 (263)
                      +..|||||||+|+++|+|||||||.+..   +.++++|||+|.+..++.....     .... ...++...++..+++++
T Consensus        85 A~~mDPQqRllLe~aw~AlEdAG~~~~~---l~g~~tgV~~g~~~~~y~~~~~-----~~~~-~~~~~~~~g~~~~~~a~  155 (1061)
T COG3321          85 AEAMDPQQRLLLEVAWEALEDAGIYPDS---LRGSATGVFAGASVADYLLLLL-----ADDE-AEPEYAITGNSSSVAAG  155 (1061)
T ss_pred             HHhcCchHhHHHHHHHHHHHHcCCCccc---cCCcceEEEEeeccCccccccc-----cccc-cccceecccchhhHHHH
Confidence            9999999999999999999999999764   7778999999999865543211     1111 55677778888899999


Q ss_pred             HHHHHhCCCCccccccccchHHHHHHHHHHHHHHhcccceEeeccCC
Q 024765          214 VLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTVSNSPSSQA  260 (263)
Q Consensus       214 ~ia~~lgl~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~v~Gae~  260 (263)
                      ||||+|||+||+++|+|+|||||+|||+||++|++|+||++++|...
T Consensus       156 Risy~l~l~GPs~~vdtaCSSsLvAvhlA~~sL~~Ge~d~alaGgv~  202 (1061)
T COG3321         156 RISYVLGLSGPSVTVDTACSSSLVAVHLACQSLRLGECDLALAGGVN  202 (1061)
T ss_pred             HHHHHhcCCCCCccccchhhHHHHHHHHHHHHHHcCCCCEEEecceE
Confidence            99999999999999999999999999999999999999999888764

>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=2.7e-37  Score=286.13  Aligned_cols=193  Identities=33%  Similarity=0.602  Sum_probs=175.8

Q ss_pred             CCCCcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCC--------CCCCCCCCHHHHhhcC
Q 024765           67 PKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKS--------LSTGGWISPKIAKKAD  138 (263)
Q Consensus        67 ~~~~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~--------fd~~~~i~~~~~~~~d  138 (263)
                      |.+++|+|||||+++|.|.++++||++|++|+++++++++|+...++.+++|+|++        ||+.+|+++++.+.||
T Consensus         1 m~~~~V~ItG~g~~~p~g~~~~~~w~~l~~G~s~i~~~~~~~~~~~~~~~~g~i~~~~~~~~~~fd~~~~i~~~~~~~~d   80 (424)
T PRK06333          1 MNKKRIVVTGMGAVSPLGCGVETFWQRLLAGQSGIRTLTDFPVGDLATKIGGQVPDLAEDAEAGFDPDRYLDPKDQRKMD   80 (424)
T ss_pred             CCCCCEEEEcceEECCCCCCHHHHHHHHHcCCCeEEeCCcccccCCCCceEEEeccccccccccCChhHcCCHHHHhhcC
Confidence            45689999999999999999999999999999999999888888888999999987        8888889999999999


Q ss_pred             HHHHHHHHHHHHHHHHcCCCCcccCcC-CCCceEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHH
Q 024765          139 KYLIYALVAGKKALVDAGITEQVSGEL-DKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLA  216 (263)
Q Consensus       139 ~~~~l~l~aa~~Al~dAGl~~~~~~~~-~~~r~gv~vG~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia  216 (263)
                      |+++|++.++++||+||||.++.   . ...|+|||+|++.+++..+++.+..+ ..+...+.++.+...+.|.++++|+
T Consensus        81 ~~~~l~~~aa~~Al~dAgl~~~~---~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is  157 (424)
T PRK06333         81 RFILFAMAAAKEALAQAGWDPDT---LEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVS  157 (424)
T ss_pred             HHHHHHHHHHHHHHHhcCCCccc---cCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHH
Confidence            99999999999999999998542   3 67899999999999998888887777 6677788899999999999999999


Q ss_pred             HHhCCCCccccccccchHHHHHHHHHHHHHHhcccceE-eeccCCCC
Q 024765          217 MDLGWTGPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQADI  262 (263)
Q Consensus       217 ~~lgl~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~~i  262 (263)
                      +.|||+||+++|+++|+||+.||+.|+++|++|+||++ |+|+|..+
T Consensus       158 ~~~gl~Gp~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~  204 (424)
T PRK06333        158 IRYGFKGPLGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAAI  204 (424)
T ss_pred             HHhCCCCCCccccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccC
Confidence            99999999999999999999999999999999999955 67777654

>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=3.7e-37  Score=284.13  Aligned_cols=190  Identities=37%  Similarity=0.652  Sum_probs=175.4

Q ss_pred             CCcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHH
Q 024765           69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (263)
Q Consensus        69 ~~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa  148 (263)
                      |++|+|||||+++|.|.++++||++|++|+++++++++|+...++..++|+|++||+..|+++++.++|||+++|++.++
T Consensus         1 m~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~g~i~~f~~~~~~~~~~~~~~~~~~~l~~~aa   80 (411)
T PRK07314          1 KRRVVVTGLGAVSPLGNDVESTWKNLLAGKSGIGPITHFDTSDLAVKIAGEVKDFNPDDYMSRKEARRMDRFIQYGIAAA   80 (411)
T ss_pred             CCcEEEEcceEECCCcCCHHHHHHHHHhCCCcEEECCcccccCCCccEEEEeCCcChhhcCCHHHhhcCCHHHHHHHHHH
Confidence            37899999999999999999999999999999999999998889999999999999998899999999999999999999


Q ss_pred             HHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCcccc
Q 024765          149 KKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYS  227 (263)
Q Consensus       149 ~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~t  227 (263)
                      ++||+||||+++   +.+..|+|||+|++.++....++++..+ ..+...+.++.+++.+.+.++++|+++||++||+++
T Consensus        81 ~~Al~dAGl~~~---~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~Gp~~t  157 (411)
T PRK07314         81 KQAVEDAGLEIT---EENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGAKGPNHS  157 (411)
T ss_pred             HHHHHHcCCCcc---cCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhCCCCcccc
Confidence            999999999854   4778999999999999998888888877 667777888888889999999999999999999999


Q ss_pred             ccccchHHHHHHHHHHHHHHhcccceE-eeccCCC
Q 024765          228 ISTACASSNYSILNATSHIIKGDTVSN-SPSSQAD  261 (263)
Q Consensus       228 v~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~~  261 (263)
                      |+++|+||+.||+.|+++|++|+||++ |+|+|..
T Consensus       158 v~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~  192 (411)
T PRK07314        158 IVTACATGAHAIGDAARLIAYGDADVMVAGGAEAA  192 (411)
T ss_pred             chhhhHHHHHHHHHHHHHHhcCCCCEEEEeeeccc
Confidence            999999999999999999999999966 5556543

>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria

Probab=100.00  E-value=8.8e-37  Score=280.32  Aligned_cols=189  Identities=24%  Similarity=0.387  Sum_probs=172.3

Q ss_pred             CcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHHH
Q 024765           70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGK  149 (263)
Q Consensus        70 ~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa~  149 (263)
                      ++|||||||+++|.|.++++||++|.+|+++|+++++|+...++.++++++++||+.+++++++.++|||++++++.+++
T Consensus         1 ~~VvItG~G~vsp~G~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~d~~~~~~l~aa~   80 (399)
T cd00832           1 RRAVVTGIGVVAPNGLGVEEYWKAVLDGRSGLGPITRFDPSGYPARLAGEVPDFDAAEHLPGRLLPQTDRMTRLALAAAD   80 (399)
T ss_pred             CCEEEEeeEEeCCCCCCHHHHHHHHHhCCCeEeeCCccccccCCCceeEEeCCcChhhcCCHHHHhhCCHHHHHHHHHHH
Confidence            47999999999999999999999999999999999999988899999999999998888999999999999999999999


Q ss_pred             HHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCccccc
Q 024765          150 KALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSI  228 (263)
Q Consensus       150 ~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~tv  228 (263)
                      +||+||||.++   +....|+||++|++.+++...+..+..+ ..+...++++.+...+.+.++++|++.||++||+++|
T Consensus        81 eAl~dAGl~~~---~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~Gp~~ti  157 (399)
T cd00832          81 WALADAGVDPA---ALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGMRGPSGVV  157 (399)
T ss_pred             HHHHHcCCCcc---ccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCCCCCcccc
Confidence            99999999854   4677899999999999998877777777 5567778888888888899999999999999999999


Q ss_pred             cccchHHHHHHHHHHHHHHhcccceE-eeccCCCC
Q 024765          229 STACASSNYSILNATSHIIKGDTVSN-SPSSQADI  262 (263)
Q Consensus       229 ~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~~i  262 (263)
                      +++|+||+.||++|+++|++|+ |++ ++|+|+.+
T Consensus       158 ~~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~  191 (399)
T cd00832         158 VAEQAGGLDALAQARRLVRRGT-PLVVSGGVDSAL  191 (399)
T ss_pred             cchhHHHHHHHHHHHHHHHcCC-CeEEEEeecccc
Confidence            9999999999999999999999 965 56666654

CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.

>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.9e-37  Score=267.56  Aligned_cols=194  Identities=38%  Similarity=0.610  Sum_probs=183.2

Q ss_pred             CCcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHH
Q 024765           69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (263)
Q Consensus        69 ~~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa  148 (263)
                      ++||||||||+++|+|.+++++|++|.+|+++|+.++.++.+.+++.++|+|+.|+.+.|+++...++|+...+|++.++
T Consensus        23 ~rRVVITGmG~VTplG~~v~~~w~~Ll~GesGI~~l~~~d~k~~p~~v~g~Ip~f~~e~~~s~~~~r~ms~~~~~al~aa  102 (440)
T KOG1394|consen   23 MRRVVITGMGAVTPLGNGVHTSWRNLLSGESGISSLEGPDYKSIPFTVAGKIPRFSVEDYVSKGDERRMSKFTKLALTAA  102 (440)
T ss_pred             ceeEEEeccceeecCCCChHHHHHHhhccccCcccccccccccCcchheeeccccccccccchhhhhhhhHHHHHHHHHH
Confidence            68999999999999999999999999999999999998999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCcccc
Q 024765          149 KKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYS  227 (263)
Q Consensus       149 ~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~t  227 (263)
                      .+||+||||.+..++..+..++||.||+++|++....+..+.+ +++.++++|++++..+.|+.++.|++.|||+||+.+
T Consensus       103 ~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm~~gl~Gpnhs  182 (440)
T KOG1394|consen  103 EEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSMKYGLRGPNHS  182 (440)
T ss_pred             HHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhhhhcCcCCchh
Confidence            9999999998765567788999999999999999888877888 888999999999999999999999999999999999


Q ss_pred             ccccchHHHHHHHHHHHHHHhcccceE-eeccCCCC
Q 024765          228 ISTACASSNYSILNATSHIIKGDTVSN-SPSSQADI  262 (263)
Q Consensus       228 v~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~~i  262 (263)
                      ++|||++|..+|..|++.||.|++|++ .+|.|+.|
T Consensus       183 vSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I  218 (440)
T KOG1394|consen  183 VSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACI  218 (440)
T ss_pred             hHhhhhhccchHHHHHHHHHhCccceeeccCcceee
Confidence            999999999999999999999999965 56677766

>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=3.5e-36  Score=276.68  Aligned_cols=189  Identities=24%  Similarity=0.303  Sum_probs=169.2

Q ss_pred             CcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCCC-CCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHH
Q 024765           70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDC-SEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (263)
Q Consensus        70 ~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~~-~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa  148 (263)
                      ++|||||||+++|.|.++++||++|.+|+++|+++++|+. ..++.++++++++||...++++++.++||+.+++++.++
T Consensus         2 ~~VvITG~g~vtp~G~~~~~~~~~L~~g~s~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~r~~~~~~~~al~aa   81 (405)
T PRK09116          2 RRVVVTGMGGVTALGEDWQTIAARLKAGRNAVRRMPEWDRYDGLNTRLAAPIDDFELPAHYTRKKIRSMGRVSLMATRAS   81 (405)
T ss_pred             CCEEEEeeEEECCCCCCHHHHHHHHHcCCCCEEeCCchhhccCCCCceEEEecCcChhHhcCHHHHhhCCHHHHHHHHHH
Confidence            6899999999999999999999999999999999998875 578899999999999888789999999999999999999


Q ss_pred             HHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCcccc
Q 024765          149 KKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYS  227 (263)
Q Consensus       149 ~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~t  227 (263)
                      ++||+||||...  ....+.|+||++|++.|+....++++..+ ..+...++++.+...++|.++++|++.||++||+++
T Consensus        82 ~~Al~dAGl~~~--~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~Gp~~t  159 (405)
T PRK09116         82 ELALEDAGLLGD--PILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFGLKGRVIP  159 (405)
T ss_pred             HHHHHHcCCCCc--cccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhCCCCCccc
Confidence            999999999531  12456899999999999988877777777 556667888888889999999999999999999999


Q ss_pred             ccccchHHHHHHHHHHHHHHhcccceEee-ccCC
Q 024765          228 ISTACASSNYSILNATSHIIKGDTVSNSP-SSQA  260 (263)
Q Consensus       228 v~tACsSsl~Al~~A~~~Lr~G~~d~~v~-Gae~  260 (263)
                      |+++|+||+.||++|+++|++|+||++|+ |+|.
T Consensus       160 i~~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~  193 (405)
T PRK09116        160 TSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEE  193 (405)
T ss_pred             ccchhhhHHHHHHHHHHHHHcCCCCEEEEecchh
Confidence            99999999999999999999999997654 4553

>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=8.2e-36  Score=274.62  Aligned_cols=190  Identities=34%  Similarity=0.573  Sum_probs=175.9

Q ss_pred             CcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHHH
Q 024765           70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGK  149 (263)
Q Consensus        70 ~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa~  149 (263)
                      ++|+|||||+++|.|.++++||++|++|+++|+++++|+...++.+++|++++||+..++++++.+++++.++|++.+++
T Consensus         2 ~~v~ItG~g~vsp~G~~~~~~~~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~f~~~~~~~~~~~~~~~~~~~l~~~Aa~   81 (406)
T PRK08439          2 KRVVVTGIGMINSLGLNKESSFKAICNGECGIKKITLFDASDFPVQIAGEITDFDPTEVMDPKEVKKADRFIQLGLKAAR   81 (406)
T ss_pred             CCEEEEeeEEECCCcCCHHHHHHHHHcCCCceEeCCCccccCCCCceeEEcCCcChhhcCCHHHHhhcCHHHHHHHHHHH
Confidence            68999999999999999999999999999999999999988899999999999999888999999999999999999999


Q ss_pred             HHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCccccc
Q 024765          150 KALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSI  228 (263)
Q Consensus       150 ~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~tv  228 (263)
                      +||+|||++++   +.+..|+||++|++.++....++.+..+ ..+.+.++++.++..+.|.++++|++.||++||++++
T Consensus        82 ~AL~dAGl~~~---~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~Gp~~~~  158 (406)
T PRK08439         82 EAMKDAGFLPE---ELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGLKGPNLSS  158 (406)
T ss_pred             HHHHHcCCCcc---cCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCCCCCcccc
Confidence            99999999854   4678899999999999988877777666 6777889999999999999999999999999999999


Q ss_pred             cccchHHHHHHHHHHHHHHhcccce-EeeccCCCC
Q 024765          229 STACASSNYSILNATSHIIKGDTVS-NSPSSQADI  262 (263)
Q Consensus       229 ~tACsSsl~Al~~A~~~Lr~G~~d~-~v~Gae~~i  262 (263)
                      +++|+|++.||+.|+++|++|++|+ +|+|+|+.+
T Consensus       159 ~~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l  193 (406)
T PRK08439        159 VTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAI  193 (406)
T ss_pred             ccHhHHHHHHHHHHHHHHHcCCCCEEEEecchhcc
Confidence            9999999999999999999999995 577888755

>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2

Probab=100.00  E-value=2.6e-36  Score=260.98  Aligned_cols=187  Identities=36%  Similarity=0.601  Sum_probs=146.9

Q ss_pred             CCcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCC-CCCCCCC---CceeEEecCC----------CCCCCC-CCHHH
Q 024765           69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQ-GFDCSEF---PTRIAAEIKS----------LSTGGW-ISPKI  133 (263)
Q Consensus        69 ~~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~-~~~~~~~---~~~~~g~i~~----------fd~~~~-i~~~~  133 (263)
                      |++|||||||+++|+|.++++||++|.+|++++++++ ||+...+   .....+.++.          ||..++ +++++
T Consensus         1 m~~V~ItG~g~~~p~g~~~~~~w~~L~~g~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (254)
T PF00109_consen    1 MRRVVITGMGCVTPGGDGLEEFWEALLSGRSGIRPIPERWDPSDYYDPPSRVAGEIDDKKGGFIDDFDFDAYFFGIPPRE   80 (254)
T ss_dssp             -S-EEEEEEEEEBTTBSSHHHHHHHHHTT---EEESCSSSCHTTSTTSSCSEEECBSSSEESSSTTTCGGGTSTCHHHHH
T ss_pred             CCEEEEEEEEEECcCCCCHHHHHhhhccCceeeeeeccccccccccccCCcccccccccccceeeecccccccccccchh
Confidence            5799999999999999999999999999999999986 7877766   5667777654          666666 77888


Q ss_pred             HhhcCHHHHHHHHHHHHHHHHcCCCCcccCcCCCC-ceEEEEeecCCChhhHHHHHHHH-Hhc--cCCCCCcccccccch
Q 024765          134 AKKADKYLIYALVAGKKALVDAGITEQVSGELDKS-RCGVIIGSAMGGLRVLNDGFEAI-KVS--YKKMSPFYIPYSLTN  209 (263)
Q Consensus       134 ~~~~d~~~~l~l~aa~~Al~dAGl~~~~~~~~~~~-r~gv~vG~~~g~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~  209 (263)
                      .+.|||+++|++.++++||+|||+.++.   .... |+|||+|++.+++    +.+..+ ..+  .....++.+..+++|
T Consensus        81 ~~~~~~~~~~~l~aa~~Al~dAg~~~~~---~~~~~r~gv~~G~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~  153 (254)
T PF00109_consen   81 ARRMDRQSRLALAAAREALEDAGLDPDD---LDGERRVGVFVGSSSGDY----EFYRALDEDGETPRDVSPWFVPNTLPN  153 (254)
T ss_dssp             HHTS-HHHHHHHHHHHHHHHHHTSTGGG---HTGGGTEEEEEEESSSHH----HHHHHHHHHTTCGGGSHTTHHHHHSTT
T ss_pred             hhhhhhhhhHHHHHhhhhcccccccccc---cccccceeeccccccccc----cccccccccccccccccccccCccccc
Confidence            8999999999999999999999998543   3444 5999999998833    344444 333  345566555556999


Q ss_pred             HHHHHHHHHhCCCCccccccccchHHHHHHHHHHHHHHhcccceE-eeccCCCC
Q 024765          210 MASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQADI  262 (263)
Q Consensus       210 ~~a~~ia~~lgl~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~~i  262 (263)
                      .++++|++.||++||+++|+++|+||+.||+.|+++|++|+||++ |+|+|.++
T Consensus       154 ~~a~~ia~~~gl~G~~~tv~~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~  207 (254)
T PF00109_consen  154 SAAGRIAILFGLRGPSYTVSTACASGLAALEAAYRAIRSGEADVALVGGVDAPL  207 (254)
T ss_dssp             HHHHHHHHHHTB-SSEEEEE-GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--S
T ss_pred             ccccchhhhcCCCCccccccccccccccccchhccccccccccccccccccccc
Confidence            999999999999999999999999999999999999999999955 66666554

3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....

>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II

Probab=100.00  E-value=1.6e-35  Score=272.74  Aligned_cols=189  Identities=40%  Similarity=0.691  Sum_probs=174.4

Q ss_pred             CcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHHH
Q 024765           70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGK  149 (263)
Q Consensus        70 ~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa~  149 (263)
                      ++|+|||||+++|.|.++++||++|.+|+++++++++|+...++.+++|+|++||+.+|+++++.++|||+++|++++++
T Consensus         1 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~s~~~~~~~~~~~~~~~~~~g~i~~f~~~~~~~~~~~~~~~~~~~l~~~aa~   80 (407)
T TIGR03150         1 RRVVVTGLGAVTPLGNGVEEFWENLLAGKSGIGPITRFDASDLPVKIAGEVKDFDPEDYIDKKEARRMDRFIQYALAAAK   80 (407)
T ss_pred             CcEEEEcceEECCCcCCHHHHHHHHHcCCCeeEECCcccccCCCCcEEEEeCCcChhhcCCHHHHhhcCHHHHHHHHHHH
Confidence            47999999999999999999999999999999999999988899999999999999988999999999999999999999


Q ss_pred             HHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCccccc
Q 024765          150 KALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSI  228 (263)
Q Consensus       150 ~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~tv  228 (263)
                      +||+|||+.++   +++..++|||+|++.++....++++..+ ..+...++++.+...+.+.++++|++.||++||+++|
T Consensus        81 ~Al~dAgl~~~---~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~g~~~~v  157 (407)
T TIGR03150        81 EAVEDSGLDIE---EEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGAKGPNHAV  157 (407)
T ss_pred             HHHHhcCCCcc---cCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCCCCccccc
Confidence            99999999854   4778999999999999998888887777 6677788888889999999999999999999999999


Q ss_pred             cccchHHHHHHHHHHHHHHhcccceE-eeccCCC
Q 024765          229 STACASSNYSILNATSHIIKGDTVSN-SPSSQAD  261 (263)
Q Consensus       229 ~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~~  261 (263)
                      +++|+||+.||++|+++|++|+||++ |+|+|..
T Consensus       158 ~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~  191 (407)
T TIGR03150       158 VTACATGTHAIGDAFRLIQRGDADVMIAGGAEAA  191 (407)
T ss_pred             ccHHHHHHHHHHHHHHHHhcCCCCEEEEecccCc
Confidence            99999999999999999999999965 5666653

FabB sequences should fall well below the noise cutoff of this model.

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=100.00  E-value=4.4e-36  Score=318.61  Aligned_cols=186  Identities=20%  Similarity=0.311  Sum_probs=157.0

Q ss_pred             CCcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeC--CCCCCCC-----------CCceeEEecC--CCCCCCC-CCHH
Q 024765           69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDI--QGFDCSE-----------FPTRIAAEIK--SLSTGGW-ISPK  132 (263)
Q Consensus        69 ~~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~--~~~~~~~-----------~~~~~~g~i~--~fd~~~~-i~~~  132 (263)
                      .++|||||||++||++.|+++||++|.+|+++|+++  +||+...           .++++||+|+  +||+.+| |+|+
T Consensus         6 ~~~IAIvGmg~~~P~a~~~~~fW~~L~~G~~~i~~ip~~rw~~~~~~~~~~~~~~~~~~~~ggfl~~v~FD~~~F~i~p~   85 (2582)
T TIGR02813         6 DMPIAIVGMASIFANSRYLNKFWDLIFEKIDAITDVPSDHWAKDDYYDSDKSEADKSYCKRGGFLPEVDFNPMEFGLPPN   85 (2582)
T ss_pred             CCCEEEEeeeeeCCCCCCHHHHHHHHHcCCCccCCCChhhCChhhccCccccccCCcccceeEecCccCCCHhhcCCCHH
Confidence            467999999999999999999999999999999998  5887544           3678999998  5999999 9999


Q ss_pred             HHhhcCHHHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHH---------------------HHHHHH
Q 024765          133 IAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLN---------------------DGFEAI  191 (263)
Q Consensus       133 ~~~~~d~~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~---------------------~~~~~~  191 (263)
                      +++.|||+|||+|+++|+||+||||..    +..++|+|||+|++.++.....                     +.+..+
T Consensus        86 ea~~mDpqqrl~L~~a~eALedAG~~~----~~~~~r~GV~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (2582)
T TIGR02813        86 ILELTDISQLLSLVVAKEVLNDAGLPD----GYDRDKIGITLGVGGGQKQSSSLNARLQYPVLKKVFKASGVEDEDSEML  161 (2582)
T ss_pred             HHHhcCHHHHHHHHHHHHHHHhCCCCC----CCCCCCEEEEEEECCCcccchhhhhhhcchhhhhhhhccccchhhHHHh
Confidence            999999999999999999999999963    2678999999999876532100                     011111


Q ss_pred             ----HhccCCCCCcccccccchHHHHHHHHHhCCCCccccccccchHHHHHHHHHHHHHHhcccceEeecc
Q 024765          192 ----KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTVSNSPSS  258 (263)
Q Consensus       192 ----~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~v~Ga  258 (263)
                          ......+.+..+++.+.|++++||+++|||+||+++|++||+||+.||++||++|++|+||++|+|+
T Consensus       162 ~~~~~~~~~~~~~~~~~g~~~n~~A~RIS~~f~L~Gps~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGG  232 (2582)
T TIGR02813       162 IKKFQDQYIHWEENSFPGSLGNVISGRIANRFDLGGMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGG  232 (2582)
T ss_pred             hhhhcccccccCccccccccccHHHHHHHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEec
Confidence                1112235566788999999999999999999999999999999999999999999999999887665

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=8.2e-35  Score=268.49  Aligned_cols=187  Identities=22%  Similarity=0.327  Sum_probs=165.3

Q ss_pred             CCcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCC--CCCCCCceeEEecC-CCCCCCCCCHHHHhhcCHHHHHHH
Q 024765           69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGF--DCSEFPTRIAAEIK-SLSTGGWISPKIAKKADKYLIYAL  145 (263)
Q Consensus        69 ~~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~--~~~~~~~~~~g~i~-~fd~~~~i~~~~~~~~d~~~~l~l  145 (263)
                      +++|||||||+++|.|.++++||++|.+|+++|+++++|  +...++.+++|++. +||+  ++++++.++|||++++++
T Consensus        11 ~~~VvItGig~~sp~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~g~i~~~~d~--~~~~~~~~~~d~~~~~~l   88 (418)
T PRK07910         11 FPNVVVTGIAMTTALATDAETTWKLLLDGQSGIRTLDDPFVEEFDLPVRIGGHLLEEFDH--QLTRVELRRMSYLQRMST   88 (418)
T ss_pred             CCCEEEEeeEEECCCCCCHHHHHHHHHcCCCeeEeCChhhhhccCCCcceEEEeccCccc--cCCHHHHhhccHHHHHHH
Confidence            479999999999999999999999999999999998654  33457788999985 4654  478999999999999999


Q ss_pred             HHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCc
Q 024765          146 VAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGP  224 (263)
Q Consensus       146 ~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp  224 (263)
                      .++++||+|||+.     ..++.|+||++|++.++....++.+..+ ..+...++++.+..+++|.++.+|++.++++||
T Consensus        89 ~aa~~AledAg~~-----~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~G~  163 (418)
T PRK07910         89 VLGRRVWENAGSP-----EVDTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAKAG  163 (418)
T ss_pred             HHHHHHHHHcCCC-----CCCcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCCCCC
Confidence            9999999999985     2567899999999999998888888777 666777888888899999999999999999999


Q ss_pred             cccccccchHHHHHHHHHHHHHHhcccceE-eeccCCCC
Q 024765          225 SYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQADI  262 (263)
Q Consensus       225 ~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~~i  262 (263)
                      +++|+++|+||+.||++|+++|++|+||++ ++|+|..+
T Consensus       164 ~~ti~taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~  202 (418)
T PRK07910        164 VITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRI  202 (418)
T ss_pred             cccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccC
Confidence            999999999999999999999999999965 66676654

>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed

Probab=100.00  E-value=9e-35  Score=267.05  Aligned_cols=187  Identities=30%  Similarity=0.460  Sum_probs=168.5

Q ss_pred             CcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHHH
Q 024765           70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGK  149 (263)
Q Consensus        70 ~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa~  149 (263)
                      ++|||||||+++|.|.++++||++|++|+++|+++++|+...++.+++|+++ ||+..+++++..+++++..++++.++.
T Consensus         2 ~rVvITG~G~vsp~G~~~~~~w~~l~~G~sgi~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~r~~~~a~~aa~   80 (406)
T PRK07967          2 RRVVITGLGIVSSIGNNQQEVLASLREGRSGITFSPEFAEMGMRSQVWGNVK-LDPTGLIDRKVMRFMGDASAYAYLAME   80 (406)
T ss_pred             CcEEEEcceEECCCCCCHHHHHHHHHcCCCceeECCcccccCCCCceEEEcC-CChhhcCCHHHhhcCCHHHHHHHHHHH
Confidence            6899999999999999999999999999999999999988899999999984 888777888889999999999999999


Q ss_pred             HHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHH-H-hccCCCCCcccccccchHHHHHHHHHhCCCCcccc
Q 024765          150 KALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-K-VSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYS  227 (263)
Q Consensus       150 ~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~t  227 (263)
                      +||+||||.++   +....|+|||+|++.++.....+.+..+ . .+.+.++|+.++..+.|.++++|+++||++||+++
T Consensus        81 ~Al~dAGl~~~---~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~l~Gp~~t  157 (406)
T PRK07967         81 QAIADAGLSEE---QVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKIKGVNYS  157 (406)
T ss_pred             HHHHHcCCCCc---cCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHCCCCCccc
Confidence            99999999843   4677899999999988877666666655 3 56678899999999999999999999999999999


Q ss_pred             ccccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          228 ISTACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       228 v~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      |++||+||+.||+.|+++||+|+||++ ++|+|.
T Consensus       158 vs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~  191 (406)
T PRK07967        158 ISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEE  191 (406)
T ss_pred             cccHhHHHHHHHHHHHHHHHcCCCCEEEEeeecc
Confidence            999999999999999999999999966 455554

>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase

Probab=100.00  E-value=1e-34  Score=269.63  Aligned_cols=189  Identities=31%  Similarity=0.532  Sum_probs=160.9

Q ss_pred             CCCcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCCC--------------CCCCceeEEecC------CCCCCC
Q 024765           68 KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDC--------------SEFPTRIAAEIK------SLSTGG  127 (263)
Q Consensus        68 ~~~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~~--------------~~~~~~~~g~i~------~fd~~~  127 (263)
                      ..++|||||||+++|.|.++++||++|++|+++|++++++++              ..++.+++++++      +||+.+
T Consensus         4 ~~~~VvItG~g~~~p~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~   83 (437)
T PLN02836          4 PTRRVVVTGLGLVTPLGCGVETTWRRLIAGECGVRALTQDDLKMKSEDEETQLYTLDQLPSRVAALVPRGTGPGDFDEEL   83 (437)
T ss_pred             CCCCEEEEeeeEECCCCCCHHHHHHHHHcCCCccccCChhhhccccccccccccccccCCccEEEEeccccccccCChHH
Confidence            457899999999999999999999999999999999965432              345678888885      577776


Q ss_pred             CCCHHHHhhcCHHHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccc
Q 024765          128 WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYS  206 (263)
Q Consensus       128 ~i~~~~~~~~d~~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~  206 (263)
                      |..   .+++++..++++.++++||+||||.+..  ....+++||++|++.++....++++..+ ..+.+.++++.++..
T Consensus        84 ~~~---~~~~~~~~~~~~~aa~~Al~dAg~~~~~--~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~  158 (437)
T PLN02836         84 WLN---SRSSSRFIGYALCAADEALSDARWLPSE--DEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRI  158 (437)
T ss_pred             hcc---ccccCHHHHHHHHHHHHHHHHcCCCccc--ccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhh
Confidence            632   3578999999999999999999997421  2456899999999998888777777666 666678899999999


Q ss_pred             cchHHHHHHHHHhCCCCccccccccchHHHHHHHHHHHHHHhcccceEee-ccCCC
Q 024765          207 LTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTVSNSP-SSQAD  261 (263)
Q Consensus       207 ~~~~~a~~ia~~lgl~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~v~-Gae~~  261 (263)
                      +.|.++++|+++||++||+++|+++|+||+.||+.|+++|++|+||++|+ |+|..
T Consensus       159 ~~n~~a~~is~~~gl~Gp~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~  214 (437)
T PLN02836        159 LINMAAGHVSIRYGFQGPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESS  214 (437)
T ss_pred             cccHHHHHHHHHhCCCCceeceeChhHHHHHHHHHHHHHHHcCCCCEEEEcccccc
Confidence            99999999999999999999999999999999999999999999996654 55543

>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated

Probab=100.00  E-value=3.9e-34  Score=263.82  Aligned_cols=189  Identities=21%  Similarity=0.274  Sum_probs=163.8

Q ss_pred             CCcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCCCC--------CCCceeEEecCCCCCCCCCCHHHHhhcCHH
Q 024765           69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCS--------EFPTRIAAEIKSLSTGGWISPKIAKKADKY  140 (263)
Q Consensus        69 ~~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~~~--------~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~  140 (263)
                      |++|||||||+++|.|.++++||++|++|+++|+++++|+..        .....+++++++|+...+++++..+.+++.
T Consensus         1 m~~VvItG~g~vsp~g~~~~~~w~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~   80 (410)
T PRK07103          1 MDEVVVTGVGVVSAIGQGRPSFAAALLAGRHAFGVMRRPGRQVPDDAGAGLASAFIGAELDSLALPERLDAKLLRRASLS   80 (410)
T ss_pred             CCCEEEEcceEECCCcCCHHHHHHHHHcCCCeEecCCcccccccccccccCCCceEEEEeCCCChhhcCCHHHhhcCCHH
Confidence            378999999999999999999999999999999999877543        345778999999988777889999999999


Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      +++++.++++||+|||+.+     .+..|+|||+|++.++.......+..+..+...+.|+.....+++.++++|++.||
T Consensus        81 ~~lal~Aa~eAl~dAgl~~-----~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg  155 (410)
T PRK07103         81 AQAALAAAREAWRDAALGP-----VDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFG  155 (410)
T ss_pred             HHHHHHHHHHHHHhcCcCC-----CCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhC
Confidence            9999999999999999952     45789999999887776666666655544555667777777888899999999999


Q ss_pred             CCCccccccccchHHHHHHHHHHHHHHhcccceEe-eccCCCC
Q 024765          221 WTGPSYSISTACASSNYSILNATSHIIKGDTVSNS-PSSQADI  262 (263)
Q Consensus       221 l~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~v-~Gae~~i  262 (263)
                      ++||+++|+++|+|++.||+.|+++|++|+||++| +|++.++
T Consensus       156 l~G~~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~  198 (410)
T PRK07103        156 IRGEGFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDL  198 (410)
T ss_pred             CCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccccC
Confidence            99999999999999999999999999999999765 6776554

>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II

Probab=100.00  E-value=1.9e-33  Score=258.69  Aligned_cols=188  Identities=41%  Similarity=0.735  Sum_probs=173.3

Q ss_pred             CcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHHH
Q 024765           70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGK  149 (263)
Q Consensus        70 ~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa~  149 (263)
                      ++|+|||||+++|.|.+.++||++|++|+++++++++|+...++..+++++++|++.+.+++++.+.|||+++|++.+++
T Consensus         1 ~~i~I~G~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~aa~   80 (406)
T cd00834           1 RRVVITGLGAVTPLGNGVEEFWEALLAGRSGIRPITRFDASGFPSRIAGEVPDFDPEDYLDRKELRRMDRFAQFALAAAE   80 (406)
T ss_pred             CcEEEECcceeCCCcCCHHHHHHHHHcCCCeeEECCcccccCCCccEEEEcCCCChhhcCCHHHhccCCHHHHHHHHHHH
Confidence            47999999999999999999999999999999999888888888999999999998866999999999999999999999


Q ss_pred             HHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCccccc
Q 024765          150 KALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSI  228 (263)
Q Consensus       150 ~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~tv  228 (263)
                      +||+|||++++   +++..++||++|++.++....++++..+ ..+.+.++++.+...+.+.++++|+++||++||+++|
T Consensus        81 ~AL~dAgl~~~---~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~g~~~~v  157 (406)
T cd00834          81 EALADAGLDPE---ELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLGLRGPNYTV  157 (406)
T ss_pred             HHHHHcCCCcc---cCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhCCCCccccc
Confidence            99999999854   4778999999999999999888888888 6677788899889899999999999999999999999


Q ss_pred             cccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          229 STACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       229 ~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      +++|+|+++||+.|+++|++|+||.+ |+|+|.
T Consensus       158 ~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~  190 (406)
T cd00834         158 STACASGAHAIGDAARLIRLGRADVVIAGGAEA  190 (406)
T ss_pred             chHHHHHHHHHHHHHHHHHcCCCCEEEEcCccc
Confidence            99999999999999999999999965 555554

KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.

>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=5.9e-33  Score=254.02  Aligned_cols=188  Identities=18%  Similarity=0.198  Sum_probs=150.8

Q ss_pred             CCCcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHH-HHhhcCHHHHHHHH
Q 024765           68 KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPK-IAKKADKYLIYALV  146 (263)
Q Consensus        68 ~~~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~-~~~~~d~~~~l~l~  146 (263)
                      ..++|||||||+++|.|.++++||++|.+|+++ ..++.+....++..+.   .++|...+++++ +.++||+.+++++.
T Consensus         4 ~~~rVvITGiG~vsp~G~~~e~~w~aL~~G~sg-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~r~~~r~~~~a~~   79 (398)
T PRK06519          4 QPNDVVITGIGLVSSLGEGLDAHWNALSAGRPQ-PNVDTETFAPYPVHPL---PEIDWSQQIPKRGDQRQMETWQRLGTY   79 (398)
T ss_pred             CCCCEEEEcceEECCCCCCHHHHHHHHHcCCCC-CCCCcccccCcCcccc---cccChhhcCCchhhhhccCHHHHHHHH
Confidence            457899999999999999999999999999998 2222222222333333   334444456666 77899999999999


Q ss_pred             HHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHH------------HHHH-HhccCCCCCcccccccchHHHH
Q 024765          147 AGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDG------------FEAI-KVSYKKMSPFYIPYSLTNMASA  213 (263)
Q Consensus       147 aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~------------~~~~-~~~~~~~~~~~~~~~~~~~~a~  213 (263)
                      ++.+||+|||+...   .....|+||++|++.++....++.            +..+ ..+.+.++|+.++.+++|.+++
T Consensus        80 Aa~~Al~dAGl~~~---~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~  156 (398)
T PRK06519         80 AAGLALDDAGIKGN---EELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLSNLLAG  156 (398)
T ss_pred             HHHHHHHHcCCCCC---CCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhhhHHHH
Confidence            99999999999732   245679999999999987765432            2233 4566778999999999999999


Q ss_pred             HHHHHhCCCCccccccccchHHHHHHHHHHHHHHhcccceE-eeccCCCC
Q 024765          214 VLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQADI  262 (263)
Q Consensus       214 ~ia~~lgl~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~~i  262 (263)
                      +|++.||++||+++|+++|+||+.||++|+++|++|+||++ ++|+|+++
T Consensus       157 ~is~~~gl~Gp~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~  206 (398)
T PRK06519        157 NISIVHKVTGSSRTFMGEESAGVSAIEIAFARIASGQSDHALVGGAYNAE  206 (398)
T ss_pred             HHHHHhCCCCccccccCCccHHHHHHHHHHHHHHcCCCCEEEEeeecccc
Confidence            99999999999999999999999999999999999999965 56677655

>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]

Probab=100.00  E-value=2.8e-32  Score=248.62  Aligned_cols=190  Identities=37%  Similarity=0.569  Sum_probs=170.4

Q ss_pred             CCcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHH
Q 024765           69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (263)
Q Consensus        69 ~~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa  148 (263)
                      +++|||||+|+++|.|.+++++|++|..|+++|..+++|+...+.+++++.+++|  ..++.+++.++||+.++|++.++
T Consensus         2 ~~rvviTG~g~vs~lG~~~~~~~~~l~~g~sgi~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~d~~~~~a~~Aa   79 (412)
T COG0304           2 MRRVVITGLGIVSSLGNGVEEVWAALLAGKSGIRPITRFDASGLGVKIAGEIKDL--DDQIAKKERRFMDRFSQLAVVAA   79 (412)
T ss_pred             CceEEEecceeeecccCCHHHHHHHHhcCCCCCCccccccccCCCCccccccccc--ccccchHHhhcccHHHHHHHHHH
Confidence            5789999999999999999999999999999999999999999999999999988  44577888889999999999999


Q ss_pred             HHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHH-HhccCC-CCCcccccccchHHHHHHHHHhCCCCccc
Q 024765          149 KKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKK-MSPFYIPYSLTNMASAVLAMDLGWTGPSY  226 (263)
Q Consensus       149 ~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~  226 (263)
                      .+||+|||+...  ..... |+||++|++.++....+..+..+ ..+.++ ++|+.++..++|..++.++.+||++||++
T Consensus        80 ~eAl~dAgl~~~--~~~~~-r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~~g~~G~~~  156 (412)
T COG0304          80 VEALEDAGLDNE--LNVDM-RVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVFGLKGPNY  156 (412)
T ss_pred             HHHHHHcCCCcc--cccCc-cEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHHhCCCCCcC
Confidence            999999999832  12333 99999999999999887644444 455555 89999999999999999999999999999


Q ss_pred             cccccchHHHHHHHHHHHHHHhcccc-eEeeccCCCCC
Q 024765          227 SISTACASSNYSILNATSHIIKGDTV-SNSPSSQADIT  263 (263)
Q Consensus       227 tv~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~~it  263 (263)
                      ++++||+||..||+.|+++|+.|++| |+++|+|++|+
T Consensus       157 ~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~  194 (412)
T COG0304         157 TPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEAAIT  194 (412)
T ss_pred             ChhhhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccC
Confidence            99999999999999999999999999 56788889875

>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases

Probab=100.00  E-value=1.6e-31  Score=246.26  Aligned_cols=179  Identities=32%  Similarity=0.457  Sum_probs=157.9

Q ss_pred             cEEEEecceeCCcCCC---HHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhc---CHHHHHH
Q 024765           71 RIVVTGLGAVTPLGDD---AHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKA---DKYLIYA  144 (263)
Q Consensus        71 ~VaItG~g~~~p~g~~---~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~---d~~~~l~  144 (263)
                      +|+|||||+++|.|.+   +++||++|.+|+++|+++++|+ ..++..++|++++|+    +++++.+++   ||+++|+
T Consensus         2 ~v~ItG~g~v~p~g~~~~~~~~~w~~l~~g~s~i~~~~~~~-~~~~~~~~g~i~~~~----~~~~~~~~~~~~~~~~~l~   76 (407)
T cd00828           2 RVVITGIGVVSPHGEGCDEVEEFWEALREGRSGIAPVARLK-SRFDRGVAGQIPTGD----IPGWDAKRTGIVDRTTLLA   76 (407)
T ss_pred             CEEEECceeecCCCCCCCCHHHHHHHHHcCCCceeeCCccc-ccCCccEEEEccCCC----cCHHHHHhccCCCHHHHHH
Confidence            7999999999999999   9999999999999999998877 677889999999887    678888888   9999999


Q ss_pred             HHHHHHHHHHcCCCCcccCc-CCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccc--hHHHHHHHHHhCC
Q 024765          145 LVAGKKALVDAGITEQVSGE-LDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLT--NMASAVLAMDLGW  221 (263)
Q Consensus       145 l~aa~~Al~dAGl~~~~~~~-~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~a~~ia~~lgl  221 (263)
                      +.++++||+|||+.+   ++ .+..++|||+|++.++....+..+..+.   +...++.++..+.  +.++++|++.||+
T Consensus        77 ~~aa~~Al~dAGl~~---~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~a~~is~~~gl  150 (407)
T cd00828          77 LVATEEALADAGITD---PYEVHPSEVGVVVGSGMGGLRFLRRGGKLDA---RAVNPYVSPKWMLSPNTVAGWVNILLLS  150 (407)
T ss_pred             HHHHHHHHHhCCCCc---cccCCccCeEEEEeeccCCHHHHHHHHHHHh---hccCCcccchhccccchHHHHHHHHhCc
Confidence            999999999999984   34 5678999999999998887766655443   3456777777777  9999999999999


Q ss_pred             -CCccccccccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          222 -TGPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       222 -~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                       +||+++|+++|+|++.||++|+++|++|+||++ |+|+|.
T Consensus       151 ~~Gp~~tv~~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~  191 (407)
T cd00828         151 SHGPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVED  191 (407)
T ss_pred             CCCCCcCcccHHHHHHHHHHHHHHHHHcCCCCEEEEccccc
Confidence             999999999999999999999999999999965 556654

They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.

>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations

Probab=99.97  E-value=2e-30  Score=239.60  Aligned_cols=182  Identities=23%  Similarity=0.311  Sum_probs=155.7

Q ss_pred             CcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCC--CCCCCC----------CCceeEEecCC---CCCCCC-CCHHH
Q 024765           70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQ--GFDCSE----------FPTRIAAEIKS---LSTGGW-ISPKI  133 (263)
Q Consensus        70 ~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~--~~~~~~----------~~~~~~g~i~~---fd~~~~-i~~~~  133 (263)
                      ++|||||||+++|.|.++++||++|.+|++++++++  +|+...          ....+++++++   ||+.+| +++++
T Consensus         1 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~   80 (421)
T cd00833           1 EPIAIVGMACRFPGAADPDEFWENLLEGRDAISEIPEDRWDADGYYPDPGKPGKTYTRRGGFLDDVDAFDAAFFGISPRE   80 (421)
T ss_pred             CCEEEEceeeECCCCCCHHHHHHHHHcCCCcCcCCChhHcCccccccccccCCCcceecceecCCcccCCHhHcCCCHHH
Confidence            379999999999999999999999999999999984  676443          25678888886   677777 89999


Q ss_pred             HhhcCHHHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHH
Q 024765          134 AKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMAS  212 (263)
Q Consensus       134 ~~~~d~~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a  212 (263)
                      .+.++++++|+++++++||+|||+.++   ..+..++||++|+..+       .|..+ ......++++.+.+.+.+..+
T Consensus        81 ~~~~~~~~~l~~~aa~~AL~dAgl~~~---~~~~~~~gv~~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~a  150 (421)
T cd00833          81 AEAMDPQQRLLLEVAWEALEDAGYSPE---SLAGSRTGVFVGASSS-------DYLELLARDPDEIDAYAATGTSRAFLA  150 (421)
T ss_pred             HHhcCHHHHHHHHHHHHHHHHcCCCch---hcCCCCceEEeCcCHH-------HHHHHHhhcccccCcccccCcchHHHH
Confidence            999999999999999999999999854   3678999999998865       22223 344446788888888889999


Q ss_pred             HHHHHHhCCCCccccccccchHHHHHHHHHHHHHHhcccceE-eeccCCC
Q 024765          213 AVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQAD  261 (263)
Q Consensus       213 ~~ia~~lgl~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~~  261 (263)
                      ++|++.||++||+++|+++|+|++.||+.|+++|++|++|++ |+|+|..
T Consensus       151 ~~i~~~~gl~g~~~~v~~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~  200 (421)
T cd00833         151 NRISYFFDLRGPSLTVDTACSSSLVALHLACQSLRSGECDLALVGGVNLI  200 (421)
T ss_pred             HHHHHHcCCCCCceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeecc
Confidence            999999999999999999999999999999999999999955 6666653

PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.

>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional

Probab=99.97  E-value=8.6e-30  Score=235.68  Aligned_cols=177  Identities=32%  Similarity=0.500  Sum_probs=153.2

Q ss_pred             eeCCcCCCHHHHHHHHHcCCCceeeCCCCC----------------CCCCCceeEEecC--CCCCCCCCCHHHHhhcCHH
Q 024765           79 AVTPLGDDAHLFHTSLLEGVTGISDIQGFD----------------CSEFPTRIAAEIK--SLSTGGWISPKIAKKADKY  140 (263)
Q Consensus        79 ~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~----------------~~~~~~~~~g~i~--~fd~~~~i~~~~~~~~d~~  140 (263)
                      +++|.|.++++||++|++|+++|+++++|+                ...++++++|+|+  +||+.+|...   .+.+++
T Consensus         1 ~vs~~G~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~f~~~~~~~~---~~~~~~   77 (421)
T PTZ00050          1 VVTPLGVGAESTWEALIAGKSGIRKLTEFPKFLPDCIPEQKALENLVAAMPCQIAAEVDQSEFDPSDFAPT---KRESRA   77 (421)
T ss_pred             CCCCCcCCHHHHHHHHHcCCCeeecCCchhhcccccccccccccccccCCCCceEEECCcccCChhHcCCc---ccCCHH
Confidence            478999999999999999999999997665                4557889999998  6888777321   235999


Q ss_pred             HHHHHHHHHHHHHHcCCC-CcccCcCCCCceEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHH
Q 024765          141 LIYALVAGKKALVDAGIT-EQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMD  218 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~-~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~  218 (263)
                      ++|++.++++||+||||. +.   +....++|+++|++.++.....+.+..+ ..+...++++.+++.+.|.++++|++.
T Consensus        78 ~~l~~~aa~~Al~dAGl~~~~---~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~  154 (421)
T PTZ00050         78 THFAMAAAREALADAKLDILS---EKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIK  154 (421)
T ss_pred             HHHHHHHHHHHHHHcCCCccc---ccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHH
Confidence            999999999999999997 43   3667899999999999888777777776 667778889999999999999999999


Q ss_pred             hCCCCccccccccchHHHHHHHHHHHHHHhcccceE-eeccCCC
Q 024765          219 LGWTGPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQAD  261 (263)
Q Consensus       219 lgl~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~~  261 (263)
                      |||+||+++|+++|+||+.||++|+++|++|+||++ |+|+|..
T Consensus       155 ~~l~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~  198 (421)
T PTZ00050        155 HKLKGPSGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEAS  198 (421)
T ss_pred             hCCCCcccccccHhHHHHHHHHHHHHHHHcCCCCEEEECccccc
Confidence            999999999999999999999999999999999966 5566543

>smart00825 PKS_KS Beta-ketoacyl synthase

Probab=99.97  E-value=8.7e-30  Score=235.83  Aligned_cols=181  Identities=24%  Similarity=0.312  Sum_probs=154.8

Q ss_pred             EEEEecceeCCcCCCHHHHHHHHHcCCCceeeC--CCCCCCCC------------CceeEEecC---CCCCCCC-CCHHH
Q 024765           72 IVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDI--QGFDCSEF------------PTRIAAEIK---SLSTGGW-ISPKI  133 (263)
Q Consensus        72 VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~--~~~~~~~~------------~~~~~g~i~---~fd~~~~-i~~~~  133 (263)
                      |+|||||+++|.|.++++||++|.+|+++++++  ++|+...+            ..+++++++   +||+..| +++++
T Consensus         1 v~ItG~g~~~p~g~~~~~~~~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~~~~~i~~~~   80 (424)
T smart00825        1 IAIVGMSCRFPGADSPEEFWDLLREGRDAITEIPADRWDADAFYYDPDPDRPGKSYVRWGGFLDDVDLFDAAFFGISPRE   80 (424)
T ss_pred             CEEEEEEeeCCCCCCHHHHHHHHHcCCcccccCChHHcCccccccccccccCCCcccccceecCchhhCCHhHcCCCHHH
Confidence            789999999999999999999999999999988  37765542            567788765   4888888 99999


Q ss_pred             HhhcCHHHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHH
Q 024765          134 AKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASA  213 (263)
Q Consensus       134 ~~~~d~~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  213 (263)
                      .++++++++|+++++.+||+|||+++.   +.+..|+|||+|++.+      ++...+......+.++.+.+.+.+..++
T Consensus        81 ~~~~~~~~~l~~~aa~~Al~dAGl~~~---~id~~~~gv~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~a~  151 (424)
T smart00825       81 AEAMDPQQRLLLEVAWEALEDAGIDPE---SLRGSRTGVFVGAMSS------DYAELLARDPEDIEGYAATGTARSFIAN  151 (424)
T ss_pred             HHhcCHHHHHHHHHHHHHHHHcCCChh---HcCCCCCEEEEEEcHH------HHHHHHhhCccccchhhhccchhHHHHH
Confidence            999999999999999999999999854   3677899999998753      2222235556677888888888899999


Q ss_pred             HHHHHhCCCCccccccccchHHHHHHHHHHHHHHhcccceE-eeccCCC
Q 024765          214 VLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQAD  261 (263)
Q Consensus       214 ~ia~~lgl~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~~  261 (263)
                      +|+..||++||+++|+++|+|++.||++|+++|++|++|++ |+|+|..
T Consensus       152 ~i~~~lgl~g~~~~v~~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~  200 (424)
T smart00825      152 RISYFFDLRGPSVTVDTACSSSLVALHLACQSLRSGECDMALAGGVNLI  200 (424)
T ss_pred             HHHHHhCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeec
Confidence            99999999999999999999999999999999999999955 5666643

The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.

>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.96  E-value=4.4e-29  Score=227.53  Aligned_cols=172  Identities=27%  Similarity=0.333  Sum_probs=137.8

Q ss_pred             CCcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHH
Q 024765           69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (263)
Q Consensus        69 ~~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa  148 (263)
                      |+||||||+|+++|.|. +++||++|++|+++|++++.|+.  ++....+.+. ++      +   ..++   ++...++
T Consensus         1 ~~rVvITG~G~vsp~G~-~~~~~~~l~~G~sgi~~~~~~~~--~~~~~~~~~~-~~------~---~~~~---~~~~~a~   64 (381)
T PRK05952          1 MMKVVVTGIGLVSALGD-LEQSWQRLLQGKSGIKLHQPFPE--LPPLPLGLIG-NQ------P---SSLE---DLTKTVV   64 (381)
T ss_pred             CCeEEEEeeEEECcccC-HHHHHHHHHcCCCCeEeCCcccc--cccccceeec-cc------c---cccc---HHHHHHH
Confidence            46899999999999999 99999999999999999987752  1111111111 11      1   1233   3556899


Q ss_pred             HHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHH-Hhcc---CCCCCcccccccchHHHHHHHHHhCCCCc
Q 024765          149 KKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSY---KKMSPFYIPYSLTNMASAVLAMDLGWTGP  224 (263)
Q Consensus       149 ~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp  224 (263)
                      .+||+|||+.+      ...|+||++|++.|+...+++++..+ ..+.   ..++|..+..+++|.++++|++.||++||
T Consensus        65 ~~Al~dagl~~------~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~Gp  138 (381)
T PRK05952         65 TAALKDAGLTP------PLTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQGP  138 (381)
T ss_pred             HHHHHhcCCCC------CCCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCCCc
Confidence            99999999973      24799999999999998888877776 3332   25677888899999999999999999999


Q ss_pred             cccccccchHHHHHHHHHHHHHHhcccceE-eeccCCCC
Q 024765          225 SYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQADI  262 (263)
Q Consensus       225 ~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~~i  262 (263)
                      +++|+++|+||+.||..|+++|++|++|++ |+|+|..+
T Consensus       139 ~~ti~~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~  177 (381)
T PRK05952        139 VLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEAPI  177 (381)
T ss_pred             cccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccC
Confidence            999999999999999999999999999955 56677655

>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed

Probab=99.96  E-value=5.3e-28  Score=221.87  Aligned_cols=182  Identities=20%  Similarity=0.242  Sum_probs=146.9

Q ss_pred             CCcEEEEecceeCCcCCCHHHHHHHHHcCC-CceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHH
Q 024765           69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGV-TGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVA  147 (263)
Q Consensus        69 ~~~VaItG~g~~~p~g~~~~~~w~~L~~G~-~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~a  147 (263)
                      |++|||||+|+++|.|.++++||++|++|+ ++|++++.|+.. ++. +.|.+++|+. .+++.+..+.+++..++.+.+
T Consensus         1 m~~VvITG~G~vsp~G~~~~~~~~~l~~G~~sgi~~~~~~~~~-~~~-~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~a   77 (392)
T PRK09185          1 MTPVYISAFGATSALGRGLDAILAALRAGRASGMRPCDFWLVD-LPT-WVGEVVGVEL-PALPAALAAFDCRNNRLALLA   77 (392)
T ss_pred             CCcEEEEeeEEECCCcCCHHHHHHHHHcCCCCCeEeCcccccc-CCe-EEEEecCccc-ccCCHHHHhcCCHHHHHHHHH
Confidence            468999999999999999999999999999 999999877543 444 3467877773 446777778889888888777


Q ss_pred             HHH---HHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhcc-CCCCCcccccccchHHHHHHHHHhCCCC
Q 024765          148 GKK---ALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSY-KKMSPFYIPYSLTNMASAVLAMDLGWTG  223 (263)
Q Consensus       148 a~~---Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~ia~~lgl~G  223 (263)
                      +.+   |+++++-      +....|+||++|++.++....+..+..+.... ....++.++....+.++++|++.||++|
T Consensus        78 ~~~~~~a~~~~~~------~~~~~r~gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G  151 (392)
T PRK09185         78 LQQIEPAVEAAIA------RYGADRIGVVLGTSTSGILEGELAYRRRDPAHGALPADYHYAQQELGSLADFLRAYLGLSG  151 (392)
T ss_pred             HHHHHHHHHhhcc------cCCCCcEEEEEeeCCccHHHHHHHHHHHhhccCCCCCchhhhhhcccHHHHHHHHHhCCCC
Confidence            766   5555542      24567999999999999988887777652222 2234566777888999999999999999


Q ss_pred             ccccccccchHHHHHHHHHHHHHHhcccceE-eeccC
Q 024765          224 PSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQ  259 (263)
Q Consensus       224 p~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae  259 (263)
                      |+++++++|+|++.||+.|+++|++|+||.+ |+|+|
T Consensus       152 p~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~d  188 (392)
T PRK09185        152 PAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVD  188 (392)
T ss_pred             CcccccChhHHHHHHHHHHHHHHHcCCCCEEEEeecc
Confidence            9999999999999999999999999999965 55555

>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.95  E-value=2.4e-27  Score=219.51  Aligned_cols=185  Identities=23%  Similarity=0.217  Sum_probs=145.6

Q ss_pred             CCCcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHH
Q 024765           68 KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVA  147 (263)
Q Consensus        68 ~~~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~a  147 (263)
                      .+.+|+|||||+++|.|.++++||++|++|+++|+++++|+...+..+++|+++.|+...      ...+++.+++.+.+
T Consensus         9 ~~~~VvITG~G~vs~~G~~~~~~~~~L~~G~s~i~~~~~~~~~~~~~~~~g~~~~~~~~~------~~~~~~~~~~~~~a   82 (425)
T PRK06501          9 GRPIVAVTGMGVVTSLGQGKADNWAALTAGESGIHTITRFPTEGLRTRIAGTVDFLPESP------FGASALSEALARLA   82 (425)
T ss_pred             CCcCEEEEeeeEECCCCCCHHHHHHHHHcCCCceEcCCcccccCCCCceEEEEeeccccc------ccccCHHHHHHHHH
Confidence            346799999999999999999999999999999999999998889999999986333222      22366789999999


Q ss_pred             HHHHHHHcCCCCcccC-----------cCCCCceEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHH
Q 024765          148 GKKALVDAGITEQVSG-----------ELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVL  215 (263)
Q Consensus       148 a~~Al~dAGl~~~~~~-----------~~~~~r~gv~vG~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~i  215 (263)
                      +++||+||||.+....           ...+.|++++.++......    .|..+ ........+..+.....+.++++|
T Consensus        83 a~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i  158 (425)
T PRK06501         83 AEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAP----SYDRLLRAARGGRFDALHERFQFGSIADRL  158 (425)
T ss_pred             HHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHH----HHHHHHhhcCcccCChhhhhhcccHHHHHH
Confidence            9999999999532100           0125688998887654322    23444 333333334455666778899999


Q ss_pred             HHHhCCCCccccccccchHHHHHHHHHHHHHHhcccce-EeeccCCCC
Q 024765          216 AMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTVS-NSPSSQADI  262 (263)
Q Consensus       216 a~~lgl~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~-~v~Gae~~i  262 (263)
                      +..||++||+++|+++|+|++.||++|+++|++|++|+ +|+|+|..+
T Consensus       159 ~~~~gl~G~~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~  206 (425)
T PRK06501        159 ADRFGTRGLPISLSTACASGATAIQLGVEAIRRGETDRALCIATDGSV  206 (425)
T ss_pred             HHHhCCCCCceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeeecccC
Confidence            99999999999999999999999999999999999995 567888654

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.95  E-value=2e-28  Score=236.14  Aligned_cols=183  Identities=27%  Similarity=0.422  Sum_probs=157.1

Q ss_pred             CCCcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeC-CCCCCC--CCCceeEEec---CCCCCCCC-CCHHHHhhcCHH
Q 024765           68 KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDI-QGFDCS--EFPTRIAAEI---KSLSTGGW-ISPKIAKKADKY  140 (263)
Q Consensus        68 ~~~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~-~~~~~~--~~~~~~~g~i---~~fd~~~~-i~~~~~~~~d~~  140 (263)
                      .+..|||.||++++|...++++||.+|++|.+.+++. .||...  +++.+. |-+   ..||..|| ..++++..||||
T Consensus         9 ~~edIvIsG~sgklPes~nv~eF~~nLl~g~DmVtdd~rrW~~G~ygLP~r~-gKlKdL~kFDa~ff~vh~KQa~~MDPq   87 (2376)
T KOG1202|consen    9 KQEDIVISGMSGKLPESDNVKEFGDNLLAGVDMVTDDPRRWEAGLYGLPKRS-GKLKDLNKFDAGFFGVHPKQANTMDPQ   87 (2376)
T ss_pred             cCCcEEEeccCCCCCCcccHHHHhhhhhcccccccCCcccccccccCCchhh-cchhhhhhhcccccCcCcccccccCHH
Confidence            3678999999999999999999999999999999988 567654  233333 433   34999999 999999999999


Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      -||+|++.|||+-|||+.|..   +.++++|||+|.+..++..      .+..++..+..|...+....+.++||+|.|+
T Consensus        88 ~RlLLE~t~EAivDaGiNP~~---LRGs~tGv~vg~s~seTs~------~~~~dp~t~~Gy~mtgc~raMfaNRiSytFD  158 (2376)
T KOG1202|consen   88 LRLLLEATWEAIVDAGINPDD---LRGSRTGVFVGVSGSETSG------ALSQDPDTVNGYSMTGCVRAMFANRISYTFD  158 (2376)
T ss_pred             HHHHHHHHHHHHHhCCCChhh---cCcccceeEEeecCccccc------cccCCCccccceeecccHHHHhhcceeEEEe
Confidence            999999999999999999864   9999999999998765542      2234556677788888889999999999999


Q ss_pred             CCCccccccccchHHHHHHHHHHHHHHhcccce-EeeccCC
Q 024765          221 WTGPSYSISTACASSNYSILNATSHIIKGDTVS-NSPSSQA  260 (263)
Q Consensus       221 l~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~-~v~Gae~  260 (263)
                      |+||++.++|+|+|++.|+..|++.++.|+||. +|+|+.-
T Consensus       159 fqGPS~s~DtacsSsl~al~~a~~~~r~gqcd~AiVaG~~l  199 (2376)
T KOG1202|consen  159 FQGPSFSVDTACSSSLMALQNAFQDIRSGQCDAAIVAGANL  199 (2376)
T ss_pred             ccCCchhhhhhhHHHHHHHHHHHHhhhccCCchhhhcccce
Confidence            999999999999999999999999999999995 5777653

>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional

Probab=99.87  E-value=1.1e-21  Score=176.42  Aligned_cols=120  Identities=24%  Similarity=0.371  Sum_probs=109.1

Q ss_pred             cCHHHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHH
Q 024765          137 ADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVL  215 (263)
Q Consensus       137 ~d~~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~i  215 (263)
                      +++.+++++.++++||+|||+.      .+++|+||++|++.|+...++++++.+ ..+...++|+.++.++.|.++++|
T Consensus         1 ~~~~~~~~~~a~~~a~~~a~~~------~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~i   74 (342)
T PRK14691          1 MGRWWRYKWITFHPSLTHADNT------EKQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHV   74 (342)
T ss_pred             CCHHHHHHHHHHHHHHHhCCCC------CCcccEEEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHH
Confidence            5788999999999999999976      446799999999999999988888877 677788999999999999999999


Q ss_pred             HHHhCCCCccccccccchHHHHHHHHHHHHHHhcccceE-eeccCCCC
Q 024765          216 AMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQADI  262 (263)
Q Consensus       216 a~~lgl~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~~i  262 (263)
                      ++.|||+||+++|+++|+||+.||+.|+++||+|+||++ ++|+|.++
T Consensus        75 s~~~~l~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~  122 (342)
T PRK14691         75 SIKHHFKGPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVI  122 (342)
T ss_pred             HHHhCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecccccC
Confidence            999999999999999999999999999999999999965 56677654

>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated

Probab=99.61  E-value=1.3e-14  Score=131.23  Aligned_cols=158  Identities=18%  Similarity=0.111  Sum_probs=107.4

Q ss_pred             CCcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHH
Q 024765           69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (263)
Q Consensus        69 ~~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa  148 (263)
                      +++|+|+|+|+++|.|.+.++.|.+|+.|.+...+...++............        +-++......+..+|+..++
T Consensus         2 ~~~v~I~~~g~vs~lG~~~~~~~aa~ragi~~~~~~~~~~~~~~~~i~~~~~--------~~~~~~~~~~r~~~La~~Al   73 (348)
T PRK06147          2 MRALAIVGSGMVTAVGLDAPSSCAAIRARLDNFQETRFIDPPGGEWLIGAPV--------PLPPPWRGPERLAEMAAPAI   73 (348)
T ss_pred             CCceEEEecceeecCcCCHHHHHHHHHcccccccccccccCCCCCceEeecC--------cCCcccCchHHHHHHHHHHH
Confidence            4679999999999999999999999999876664444333210111111111        11111122346788999999


Q ss_pred             HHHHHHcCC-CCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCC--CCcc
Q 024765          149 KKALVDAGI-TEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGW--TGPS  225 (263)
Q Consensus       149 ~~Al~dAGl-~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~Gp~  225 (263)
                      .+||++++. .        ..++.++++.+...               ....+.    ......+..++..+|+  +||+
T Consensus        74 ~~aL~~a~~~~--------~~~i~lil~~~~~~---------------~~~~~~----~~~~~~~~~~~~~lG~~~~~~~  126 (348)
T PRK06147         74 AEALEGLPALD--------ASEAPLLLCVAEEE---------------RPGRPP----DLEERLLRELEARLGLRLEPGS  126 (348)
T ss_pred             HHHHHhccccc--------ccCCcEEEEeCchh---------------cCCCCc----chHHHHHHHHHHHhCCCCCCCc
Confidence            999999883 3        34577888765310               000110    1122346677888887  6789


Q ss_pred             ccccccchHHHHHHHHHHHHHHhcccc-eEeeccCCC
Q 024765          226 YSISTACASSNYSILNATSHIIKGDTV-SNSPSSQAD  261 (263)
Q Consensus       226 ~tv~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~~  261 (263)
                      ++|+++|+|+++||..|+++|+.|++| ++|+|+|..
T Consensus       127 ~~i~~~casg~~Al~~A~~~i~~G~~~~~lvgg~d~~  163 (348)
T PRK06147        127 AVIARGRVSGAVALAQARRLIAAGGCPRVLVAGVDSL  163 (348)
T ss_pred             ccccccchHHHHHHHHHHHHHHcCCCCEEEEEeeccc
Confidence            999999999999999999999999998 556777764

>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction

Probab=99.60  E-value=1.3e-14  Score=129.98  Aligned_cols=114  Identities=25%  Similarity=0.401  Sum_probs=95.1

Q ss_pred             HHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHH
Q 024765          140 YLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMD  218 (263)
Q Consensus       140 ~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~  218 (263)
                      +++|++.++++||++||++++   ....+..+||+|++.+....     ... ......+.|+.+.+.+.+..+++|+..
T Consensus        11 ~~~l~~~aa~~aL~~Ag~~~~---~~~~~i~~ii~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~   82 (332)
T cd00825          11 VSILGFEAAERAIADAGLSRE---YQKNPIVGVVVGTGGGSPRF-----QVFGADAMRAVGPYVVTKAMFPGASGQIATP   82 (332)
T ss_pred             HHHHHHHHHHHHHHHcCCCcc---ccCCCCEEEEEEeCCccHHH-----HhhhhccccccCcchhhcccchHHHHHHHHH
Confidence            578999999999999999843   24457789999998765431     122 445557788899999999999999999


Q ss_pred             hCCCCccccccccchHHHHHHHHHHHHHHhcccc-eEeeccCCC
Q 024765          219 LGWTGPSYSISTACASSNYSILNATSHIIKGDTV-SNSPSSQAD  261 (263)
Q Consensus       219 lgl~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~~  261 (263)
                      +|++||+++|+++|+|++.||++|+++|++|++| ++|+|+|..
T Consensus        83 lgl~g~~~~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~  126 (332)
T cd00825          83 LGIHGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEEL  126 (332)
T ss_pred             hCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccc
Confidence            9999999999999999999999999999999998 456777753

Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).

>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain

Probab=99.20  E-value=3.5e-10  Score=95.32  Aligned_cols=123  Identities=18%  Similarity=0.243  Sum_probs=109.5

Q ss_pred             CCCCHHHHhhcCHHHHHHHHHHHHHHHHc-CCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCccccc
Q 024765          127 GWISPKIAKKADKYLIYALVAGKKALVDA-GITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPY  205 (263)
Q Consensus       127 ~~i~~~~~~~~d~~~~l~l~aa~~Al~dA-Gl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (263)
                      .+|++.+.|+|++..|+++.++++++++. ..+            .+++++..|+.....+....+..+ +.++|..|..
T Consensus        21 ~~lp~m~rRRls~~~rla~~~a~~~~~~~~~~d------------~~VfaS~~Gel~~t~~ll~~l~~~-~~lSPT~Fs~   87 (218)
T PF13723_consen   21 AFLPPMQRRRLSRLSRLALEAALECLAEDEQPD------------AIVFASRHGELERTFKLLEALAEE-EELSPTAFSQ   87 (218)
T ss_pred             ccCCHHHHcccCHHHHHHHHHHHHHHhccCCCC------------cEEEEeCCCcHHHHHHHHHHHHhC-CCcCccchhh
Confidence            44999999999999999999999998652 221            689999999999999999988433 4599999999


Q ss_pred             ccchHHHHHHHHHhCCCCccccccccchHHHHHHHHHHHHHHhcccceEeeccCCCC
Q 024765          206 SLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTVSNSPSSQADI  262 (263)
Q Consensus       206 ~~~~~~a~~ia~~lgl~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~v~Gae~~i  262 (263)
                      +++|.+++.+++..+.++|+.+|+.+-.|...||..|+-.|..|.-.++|++.|.++
T Consensus        88 SVHNA~aG~~sI~~~~~~~~tal~a~~~sf~~aLleA~~~l~~~~~~VLlv~~De~~  144 (218)
T PF13723_consen   88 SVHNAAAGYWSIATKNTGPNTALAAGEDSFEAALLEAAAQLAEGAEPVLLVCYDEPL  144 (218)
T ss_pred             hhhhHHHHHHHHHhCCCCceEEEecCcchHHHHHHHHHHHHHcCCCCEEEEEeCCCC
Confidence            999999999999999999999999999999999999999999995578899988876

>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction

Probab=99.15  E-value=2.7e-10  Score=98.11  Aligned_cols=89  Identities=28%  Similarity=0.401  Sum_probs=74.4

Q ss_pred             HHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 024765          140 YLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (263)
Q Consensus       140 ~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l  219 (263)
                      .+.|+.+++.+||+++|++++       +..+|++|++.++.                         ..+..+.+|+..+
T Consensus         7 ~~~l~~~A~~~al~~ag~~~~-------~i~~li~~~~~~~~-------------------------~~~~~a~~i~~~l   54 (254)
T cd00327           7 ASELGFEAAEQAIADAGLSKG-------PIVGVIVGTTGGSG-------------------------EFSGAAGQLAYHL   54 (254)
T ss_pred             HHHHHHHHHHHHHHHcCCCCC-------CceEEEEEECCCCc-------------------------cccHHHHHHHHHh
Confidence            578999999999999999753       34489999875321                         1356689999999


Q ss_pred             CC-CCccccccccchHHHHHHHHHHHHHHhcccce-EeeccCC
Q 024765          220 GW-TGPSYSISTACASSNYSILNATSHIIKGDTVS-NSPSSQA  260 (263)
Q Consensus       220 gl-~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~-~v~Gae~  260 (263)
                      |+ ++|+++|+++|+|++.||++|+++|++|++|. +|+|+|.
T Consensus        55 g~~~~~~~~i~~~C~s~~~al~~A~~~i~~g~~~~~lv~~~e~   97 (254)
T cd00327          55 GISGGPAYSVNQACATGLTALALAVQQVQNGKADIVLAGGSEE   97 (254)
T ss_pred             CCCCCCcceeccHhHHHHHHHHHHHHHHHCCCCCEEEEEecce
Confidence            99 99999999999999999999999999999985 4676663

Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.

>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2

Probab=99.11  E-value=1.9e-10  Score=100.29  Aligned_cols=88  Identities=24%  Similarity=0.235  Sum_probs=65.9

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+.+++.++|+++|++++.++       .|++|+..+.                         .....++..++...|
T Consensus        27 ~~L~~~a~~~al~~~~i~~~~Id-------~v~~G~~~~~-------------------------~~g~~~ar~~~l~aG   74 (264)
T PF00108_consen   27 EDLAAEAVKAALERAGIDPEDID-------AVIVGNVLQE-------------------------GEGQNIARQAALAAG   74 (264)
T ss_dssp             HHHHHHHHHHHHHHHTSHGGGEE-------EEEEE-SSSC-------------------------TTTCHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhcccchhhhh-------hcCccccccc-------------------------ccchhhhhhhhhhcc
Confidence            56789999999999999875544       5889886421                         113345667777788


Q ss_pred             CC--CccccccccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          221 WT--GPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       221 l~--Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      |.  -|.++|+.+|+||+.||++|+..|++|+.|++ ++|.|.
T Consensus        75 l~~~vp~~~V~~~CaSG~~Av~~a~~~I~sG~~dvvlagGvE~  117 (264)
T PF00108_consen   75 LPESVPATTVNRACASGLQAVHLAAMAIASGEADVVLAGGVES  117 (264)
T ss_dssp             S-TTSEEEEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEE
T ss_pred             cccccceeeehhhhhHHHHHHHHhhhhhcCCCccEEEEecccc
Confidence            83  48999999999999999999999999999976 455553

3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....

>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]

Probab=99.11  E-value=7.3e-10  Score=98.46  Aligned_cols=138  Identities=20%  Similarity=0.272  Sum_probs=94.7

Q ss_pred             CcEEEEecceeCCcC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHH
Q 024765           70 RRIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (263)
Q Consensus        70 ~~VaItG~g~~~p~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa  148 (263)
                      ..+.|+|+|...|.- .+.+.+-+.+-.-+..|.....     ...+.      +.          ..-.-..-|+.+|+
T Consensus         2 ~~a~i~g~G~~lP~~~vtn~d~e~~~~tsdewI~~rtG-----ir~R~------~a----------~~~e~~s~la~~Aa   60 (323)
T COG0332           2 MNAKILGIGSYLPERVVTNADLEKRVDTSDEWIETRTG-----IRERR------IA----------ADDETTSDLAVEAA   60 (323)
T ss_pred             CcceEEEEEeecCCcccChHHHHhccCCCcceeeeecC-----Cceee------ec----------CCCccHHHHHHHHH
Confidence            457899999999987 4555554333222222222210     00000      00          00122467899999


Q ss_pred             HHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCCC-cccc
Q 024765          149 KKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTG-PSYS  227 (263)
Q Consensus       149 ~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~t  227 (263)
                      ++||++||+.++.++       .|++.++.                         +.......|..|...||+++ +.|.
T Consensus        61 ~~AL~~Agi~~~dID-------lII~aT~t-------------------------pd~~~Ps~A~~vq~~LG~~~~~afD  108 (323)
T COG0332          61 RKALEDAGISPDDID-------LIIVATST-------------------------PDHLFPSTACLVQARLGLGGAPAFD  108 (323)
T ss_pred             HHHHHHcCCCHHHCC-------EEEEEcCC-------------------------cccCCChHHHHHHHHhCCCCcceee
Confidence            999999999965433       45555542                         11223466899999999998 9999


Q ss_pred             ccccchHHHHHHHHHHHHHHhcccc-eEeeccCC
Q 024765          228 ISTACASSNYSILNATSHIIKGDTV-SNSPSSQA  260 (263)
Q Consensus       228 v~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~  260 (263)
                      +..+||+.++||..|..+|++|... +.|+|+|-
T Consensus       109 l~aaCsgf~yaL~~A~~~i~sG~~k~vLVVg~e~  142 (323)
T COG0332         109 LQAACSGFLYALSVADGLIRSGGYKNVLVVGAET  142 (323)
T ss_pred             chhhhHHHHHHHHHHHHHHHcCCCCEEEEEehhH
Confidence            9999999999999999999999997 77899884

>PRK06633 acetyl-CoA acetyltransferase; Provisional

Probab=99.10  E-value=6.7e-10  Score=101.94  Aligned_cols=87  Identities=22%  Similarity=0.288  Sum_probs=68.1

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+.++.+++|+|+|++++.++       .||+|+....                        + ....++..++...|
T Consensus        28 ~~L~~~a~~~al~~agi~~~~Id-------~vv~G~~~~~------------------------~-~g~~~~r~~~~~~G   75 (392)
T PRK06633         28 PMLAAHLIKDILQNSKIDPALVN-------EVILGQVITG------------------------G-SGQNPARQTLIHAG   75 (392)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHcC-------EEEEEecCcc------------------------c-cccHHHHHHHHHCC
Confidence            34788999999999999876544       5899975311                        0 12234566788889


Q ss_pred             CCC--ccccccccchHHHHHHHHHHHHHHhcccceE-eeccC
Q 024765          221 WTG--PSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQ  259 (263)
Q Consensus       221 l~G--p~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae  259 (263)
                      +..  |+++|+++|+||+.|+..|+++|++|++|++ ++|.|
T Consensus        76 l~~~~p~~~V~~~CaSG~~Ai~~A~~~I~sG~~dvvla~G~E  117 (392)
T PRK06633         76 IPKEVPGYTINKVCGSGLKSVALAANSIMTGDNEIVIAGGQE  117 (392)
T ss_pred             CCCCccchhhcchhHHHHHHHHHHHHHHHcCCCCEEEEcccc
Confidence            963  9999999999999999999999999999976 45565

>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=99.08  E-value=1.4e-09  Score=97.07  Aligned_cols=139  Identities=19%  Similarity=0.218  Sum_probs=94.6

Q ss_pred             CCcEEEEecceeCCcC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHH
Q 024765           69 ERRIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVA  147 (263)
Q Consensus        69 ~~~VaItG~g~~~p~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~a  147 (263)
                      |.+|.|+++|...|.- .+.+++++.+......|.  .++   ++..+.   +.  +      +.     .....|+.++
T Consensus         1 ~~~v~I~ai~~~lP~~~~~~~~~~~~~~~~~~~i~--~~~---gi~~r~---~~--~------~~-----~~~~~la~~A   59 (319)
T PRK09352          1 MMYAKILGTGSYLPERVVTNDDLEKMVDTSDEWIV--TRT---GIKERR---IA--A------PD-----ETTSDLATEA   59 (319)
T ss_pred             CCceEEEEEEEECCCeEEcHHHHHHHcCCCHHHhh--hhc---CeEEEE---eC--C------CC-----CCHHHHHHHH
Confidence            3578999999999987 677887776532111110  111   110010   00  0      00     1247889999


Q ss_pred             HHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCCC-ccc
Q 024765          148 GKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTG-PSY  226 (263)
Q Consensus       148 a~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~  226 (263)
                      +.+||+++|++++.++       .|++|++...                        ... ...+.+|+..+|+.+ |.+
T Consensus        60 ~~~al~~agl~~~~id-------~vi~~~~~~~------------------------~~~-~~~~~~i~~~lG~~~~~~~  107 (319)
T PRK09352         60 AKKALEAAGIDPEDID-------LIIVATTTPD------------------------YAF-PSTACLVQARLGAKNAAAF  107 (319)
T ss_pred             HHHHHHHcCCCHHHCC-------EEEEEcCCCC------------------------CCC-chHHHHHHHHhCCCCCcEe
Confidence            9999999999864322       5777765310                        001 134688999999988 899


Q ss_pred             cccccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          227 SISTACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       227 tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      +|+++|+|++.||..|+++|++|++|.+ |+|+|.
T Consensus       108 ~v~~~Casg~~al~~A~~~i~~g~~~~vLvv~~e~  142 (319)
T PRK09352        108 DLSAACSGFVYALSTADQFIRSGAYKNVLVIGAEK  142 (319)
T ss_pred             eccccchhHHHHHHHHHHHHHcCCCCEEEEEEehh
Confidence            9999999999999999999999999854 677774

>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed

Probab=99.06  E-value=1.3e-09  Score=101.34  Aligned_cols=87  Identities=16%  Similarity=0.239  Sum_probs=68.2

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+.+++++||+++|++++.++       .|++|+...                         ......++..++...|
T Consensus        30 ~eL~~~a~~~al~~agl~~~~ID-------~vi~G~~~~-------------------------~~~~~~~ar~~a~~aG   77 (428)
T PRK08963         30 VDLGKMVVGELLARSEIDPELIE-------QLVFGQVVQ-------------------------MPEAPNIAREIVLGTG   77 (428)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEeccCC-------------------------CCCccHHHHHHHHHCC
Confidence            45788999999999999876543       689987531                         0001234667889999


Q ss_pred             CC--CccccccccchHHHHHHHHHHHHHHhcccceEe-eccC
Q 024765          221 WT--GPSYSISTACASSNYSILNATSHIIKGDTVSNS-PSSQ  259 (263)
Q Consensus       221 l~--Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~v-~Gae  259 (263)
                      +.  -|+++|+++|+||+.||+.|+++|++|++|++| +|.|
T Consensus        78 l~~~~P~~tV~~aCaSG~~Ai~~Aa~~I~sG~~dvvLvgG~E  119 (428)
T PRK08963         78 MNVHTDAYSVSRACATSFQAVANVAESIMAGTIDIGIAGGAD  119 (428)
T ss_pred             CCCCCcceeehhhhHHHHHHHHHHHHHHHCCCCCEEEEeccc
Confidence            96  499999999999999999999999999999765 5555

>PRK08131 acetyl-CoA acetyltransferase; Provisional

Probab=99.04  E-value=1.4e-09  Score=100.23  Aligned_cols=88  Identities=16%  Similarity=0.145  Sum_probs=67.4

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+.++..+||+|+|++++.++       .|++|+...+.                        .....++..++...|
T Consensus        27 ~eL~~~a~~~al~~agi~~~~Id-------~v~~G~~~~~~------------------------~~~~~~ar~~~~~~G   75 (401)
T PRK08131         27 DDLAATVIRRLLEKSGFPGDDIE-------DVILGCTNQAG------------------------EDSRNVARNALLLAG   75 (401)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccccc------------------------cccccHHHHHHHhcC
Confidence            45789999999999999875433       68999753110                        001123445778888


Q ss_pred             CC--CccccccccchHHHHHHHHHHHHHHhcccceE-eeccC
Q 024765          221 WT--GPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQ  259 (263)
Q Consensus       221 l~--Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae  259 (263)
                      +.  -|.++|+++|+||+.||+.|+++|++|++|++ ++|.|
T Consensus        76 lp~~~p~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvlagG~E  117 (401)
T PRK08131         76 LPVTVPGQTVNRLCASGLAAVIDAARAITCGEGDLYLAGGVE  117 (401)
T ss_pred             CCCCCceeeeechhhhHHHHHHHHHHHHHCCCCCEEEEEEec
Confidence            86  58999999999999999999999999999976 45555

>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=99.02  E-value=5.1e-09  Score=95.67  Aligned_cols=90  Identities=20%  Similarity=0.259  Sum_probs=70.2

Q ss_pred             HHHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHH
Q 024765          139 KYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMD  218 (263)
Q Consensus       139 ~~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~  218 (263)
                      ....|+..++.+||+++|++++.++       .|++++....                         ......+..|+..
T Consensus        94 ~~~~la~~Aa~~aL~~agl~~~~Id-------~li~~~~~~~-------------------------~~~p~~a~~v~~~  141 (372)
T PRK07515         94 IQAEMGVAAARQALARAGRTAEDID-------AVIVACSNMQ-------------------------RAYPAMAIEIQQA  141 (372)
T ss_pred             hHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEECCCCC-------------------------CCCcHHHHHHHHh
Confidence            3467999999999999999864322       4677654210                         0112246789999


Q ss_pred             hCCCCccccccccchHHHHHHHHHHHHHHhcccce-EeeccCC
Q 024765          219 LGWTGPSYSISTACASSNYSILNATSHIIKGDTVS-NSPSSQA  260 (263)
Q Consensus       219 lgl~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~-~v~Gae~  260 (263)
                      +|+++++++|+.+|+|++.||..|+++|++|.+|. +|+|+|.
T Consensus       142 Lgl~~~~~~v~~aCasg~~al~~A~~~i~~g~~~~vLvv~~e~  184 (372)
T PRK07515        142 LGIEGFAFDMNVACSSATFGIQTAANAIRSGSARRVLVVNPEI  184 (372)
T ss_pred             cCCCCcEEEecchhHHHHHHHHHHHHHHHcCCCCEEEEEeeec
Confidence            99999999999999999999999999999999984 5677774

>PRK06205 acetyl-CoA acetyltransferase; Provisional

Probab=99.02  E-value=2e-09  Score=99.45  Aligned_cols=87  Identities=17%  Similarity=0.224  Sum_probs=68.3

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+.+++++||+|+|++++.++       .|++|+....                         .....++..++..+|
T Consensus        27 ~eLa~~A~~~AL~~agl~~~dID-------~vv~g~~~~~-------------------------~~~~~~a~~va~~~G   74 (404)
T PRK06205         27 EELAATVIRALVERTGIDPARID-------DVIFGQGYPN-------------------------GEAPAIGRVAALDAG   74 (404)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccCC-------------------------CCCChHHHHHHHHcC
Confidence            45789999999999999865433       6888875311                         111234567889999


Q ss_pred             CC--CccccccccchHHHHHHHHHHHHHHhcccceE-eeccC
Q 024765          221 WT--GPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQ  259 (263)
Q Consensus       221 l~--Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae  259 (263)
                      +.  =|+++|+++|+|++.||+.|+++|++|.+|++ |+|.|
T Consensus        75 l~~~~p~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLv~G~E  116 (404)
T PRK06205         75 LPVTVPGMQLDRRCGSGLQAVITAAMQVQTGAADVVIAGGAE  116 (404)
T ss_pred             CCCCCceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEeeeh
Confidence            86  48999999999999999999999999999965 55666

>PRK09051 beta-ketothiolase; Provisional

Probab=99.01  E-value=2.4e-09  Score=98.53  Aligned_cols=88  Identities=22%  Similarity=0.329  Sum_probs=66.6

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+.+++++||+++|++++.++       .|++|+.....                        ......+..++...|
T Consensus        28 ~eL~~~A~~~AL~~agi~~~dID-------~vi~g~~~~~~------------------------~~~~~~a~~~~~~~G   76 (394)
T PRK09051         28 TDLGATVVREALARAGVDPDQVG-------HVVFGHVIPTE------------------------PRDMYLSRVAAINAG   76 (394)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHcC-------EEEEeeecccc------------------------CCCccHHHHHHHHcC
Confidence            45789999999999999865433       57888753110                        001223445667779


Q ss_pred             CC--CccccccccchHHHHHHHHHHHHHHhcccceE-eeccC
Q 024765          221 WT--GPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQ  259 (263)
Q Consensus       221 l~--Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae  259 (263)
                      +.  -|+++|+++|+||+.|++.|+++|++|.+|.+ |+|+|
T Consensus        77 l~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLvvG~E  118 (394)
T PRK09051         77 VPQETPAFNVNRLCGSGLQAIVSAAQAILLGDADVAIGGGAE  118 (394)
T ss_pred             CCCCCceEEecccchHHHHHHHHHHHHHHcCCCCEEEEEeeh
Confidence            84  59999999999999999999999999999965 56666

>PRK07108 acetyl-CoA acetyltransferase; Provisional

Probab=98.98  E-value=1.6e-09  Score=99.56  Aligned_cols=89  Identities=17%  Similarity=0.162  Sum_probs=71.0

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+.+++++||+++|++++.++       .|++|+...+.                        ..+..++..++..+|
T Consensus        28 ~dL~~~A~~~aL~~agi~~~~ID-------~vi~G~~~~~~------------------------~~~~~~a~~i~~~lG   76 (392)
T PRK07108         28 ATLGGHVVQHAVERAKLDPAEVE-------DVIMGCANPEG------------------------ATGANIARQIALRAG   76 (392)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------cEEEEEeeccc------------------------ccccHHHHHHHHHcC
Confidence            56889999999999999876543       48888763211                        111247888999999


Q ss_pred             CC--CccccccccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          221 WT--GPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       221 l~--Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      +.  .|+++|+++|+||+.||+.|+++|++|++|++ ++|.|.
T Consensus        77 l~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vlagGvE~  119 (392)
T PRK07108         77 LPVTVPGMTVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVES  119 (392)
T ss_pred             CCCCCceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEec
Confidence            85  79999999999999999999999999999966 556553

>PRK13359 beta-ketoadipyl CoA thiolase; Provisional

Probab=98.98  E-value=3.1e-09  Score=97.88  Aligned_cols=88  Identities=16%  Similarity=0.119  Sum_probs=68.4

Q ss_pred             HHHHHHHHHHHH-HcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          142 IYALVAGKKALV-DAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       142 ~l~l~aa~~Al~-dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      .|+.++..++|+ ++|++++.++       .||+|+....                        +.....++..++...|
T Consensus        28 ~L~~~a~~~al~r~a~i~~~~Id-------~vi~G~~~~~------------------------~~~g~~~ar~~~l~~G   76 (400)
T PRK13359         28 DLGAVPLKALVERNPDVDWAAID-------DVIYGCANQA------------------------GEDNRNVARMSLLLAG   76 (400)
T ss_pred             HHHHHHHHHHHHhccCCCHHHCC-------EEEEEecccc------------------------ccccccHHHHHHHHcC
Confidence            467779999999 5799876544       6899975310                        0111356778889999


Q ss_pred             CCC--ccccccccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          221 WTG--PSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       221 l~G--p~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      |.+  |+++|+.+|+||+.|+++|+++|++|++|++ ++|.|.
T Consensus        77 l~~~vp~~tV~~~CaSG~~Av~~A~~~I~sG~~divlagGvEs  119 (400)
T PRK13359         77 LPHGVPGSTINRLCGSGMDAVGVAARAIKSGEAALMIAGGVES  119 (400)
T ss_pred             CCCCCceEEEeccchhHHHHHHHHHHHHHcCCCCEEEEeeeec
Confidence            975  9999999999999999999999999999966 566663

>PRK06954 acetyl-CoA acetyltransferase; Provisional

Probab=98.98  E-value=4e-09  Score=97.22  Aligned_cols=88  Identities=14%  Similarity=0.165  Sum_probs=63.5

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+.+++.+||+|+|++++.++       .|++|+....                        +. ...++...+...|
T Consensus        32 ~eL~~~a~~~aL~~Agi~~~dID-------~vi~G~~~~~------------------------~~-~~~~~~~~~l~ag   79 (397)
T PRK06954         32 PQLGAAAIAAAVERAGLKPEQID-------EVVMGCVLPA------------------------GQ-GQAPARQAALGAG   79 (397)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHcC-------EEEEEecCCC------------------------cc-chHHHHHHHHcCC
Confidence            45789999999999999876544       5888865310                        01 1122333334445


Q ss_pred             C--CCccccccccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          221 W--TGPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       221 l--~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      +  +-|+++|+.+|+||+.||..|+++|++|++|++ ++|.|.
T Consensus        80 ~~~~~p~~~V~~aCaSG~~Av~~A~~~I~sG~~d~vLv~G~E~  122 (397)
T PRK06954         80 LPLSVGCTTVNKMCGSGMRAAMFAHDMLVAGSVDVIVAGGMES  122 (397)
T ss_pred             CCCCccEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEeeec
Confidence            4  347799999999999999999999999999965 566663

>PRK09268 acetyl-CoA acetyltransferase; Provisional

Probab=98.97  E-value=4e-09  Score=97.98  Aligned_cols=87  Identities=16%  Similarity=0.158  Sum_probs=64.2

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHH--
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMD--  218 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~--  218 (263)
                      ..|+.+++.+||+++|++++.++       .|++|+..+...                         ...++..++..  
T Consensus        32 ~eL~~~a~~~al~~agl~~~~Id-------~vv~G~~~~~~~-------------------------~~~~~r~~~l~~g   79 (427)
T PRK09268         32 QDMLTAALDGLVDRFGLQGERLG-------EVVAGAVLKHSR-------------------------DFNLTRECVLGSA   79 (427)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecccCCc-------------------------cccHHHHHHHHcC
Confidence            45788999999999999865443       688887531000                         01133444444  


Q ss_pred             hCCCCccccccccchHHHHHHHHHHHHHHhcccceEe-eccC
Q 024765          219 LGWTGPSYSISTACASSNYSILNATSHIIKGDTVSNS-PSSQ  259 (263)
Q Consensus       219 lgl~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~v-~Gae  259 (263)
                      ++...|+++|+++|+||+.|+..|+++|++|.+|++| +|.|
T Consensus        80 l~~~~p~~~V~~~CaSG~~ai~~A~~~I~sG~~d~vlvgG~E  121 (427)
T PRK09268         80 LSPYTPAYDLQQACGTGLEAAILVANKIALGQIDSGIAGGVD  121 (427)
T ss_pred             CCCCCceeeeechhhHHHHHHHHHHHHHHCCCCCEEEEeeEE
Confidence            4557899999999999999999999999999999765 5555

>TIGR02446 FadI fatty oxidation complex, beta subunit FadI

Probab=98.95  E-value=5.5e-09  Score=97.07  Aligned_cols=88  Identities=16%  Similarity=0.238  Sum_probs=67.7

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+.+++++||+|+|++++.++       .|++|+..+.                         .....++..++...|
T Consensus        32 ~~L~~~a~~~al~~agl~~~~Id-------~vi~G~~~~~-------------------------~~~~~~ar~~~l~aG   79 (430)
T TIGR02446        32 VDLGKMVVSELLARSEIDPKLIE-------QLVFGQVVQM-------------------------PEAPNIAREIVLGTG   79 (430)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccCc-------------------------CccchHHHHHHHhCC
Confidence            45789999999999999876533       5888865310                         011235666667779


Q ss_pred             CC-C-ccccccccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          221 WT-G-PSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       221 l~-G-p~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      +. + |.++|+.+|+||+.|+++|+++|++|++|++ ++|.|.
T Consensus        80 l~~~~p~~~V~~~CaSG~~A~~~a~~~I~sG~~dvvla~G~E~  122 (430)
T TIGR02446        80 MNVHTDAYSVTRACATSFQSAVNVAESIMAGAIDIGIAGGADS  122 (430)
T ss_pred             CCCCCchhhhhhhhhHHHHHHHHHHHHHHCCCCCEEEEeeeEc
Confidence            97 4 8999999999999999999999999999976 556553

This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.

>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III

Probab=98.95  E-value=1.1e-08  Score=91.23  Aligned_cols=137  Identities=19%  Similarity=0.214  Sum_probs=92.1

Q ss_pred             cEEEEecceeCCcC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHHH
Q 024765           71 RIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGK  149 (263)
Q Consensus        71 ~VaItG~g~~~p~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa~  149 (263)
                      .+.|.++|..+|.- .+.+++.+.+......+.  ++   .++..+.   +.        .+.     .....|+.+++.
T Consensus         2 ~~~I~~i~~~~P~~~~~~~~~~~~~~~~~~~i~--~~---~gi~~r~---~~--------~~~-----~~~~~la~~A~~   60 (318)
T TIGR00747         2 YAGILGTGSYLPEKVLTNADLEKMVDTSDEWIV--TR---TGIKERR---IA--------ADD-----ETSSTMGFEAAK   60 (318)
T ss_pred             CCEEEEEEEECCCceecHHHHHHhcCCchHHee--cc---cCceEEE---EC--------CCC-----CCHHHHHHHHHH
Confidence            37799999999987 677887776532111010  11   0111110   00        000     123668999999


Q ss_pred             HHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCCC-ccccc
Q 024765          150 KALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTG-PSYSI  228 (263)
Q Consensus       150 ~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv  228 (263)
                      +||+++|++++.++       .|++++....                         ......+.+++..+|+++ |++.|
T Consensus        61 ~al~~agl~~~~Id-------~~i~~~~~~~-------------------------~~~~~~a~~l~~~lGl~~~~~~~v  108 (318)
T TIGR00747        61 RAIENAGISKDDID-------LIIVATTTPD-------------------------HAFPSAACMVQAYLGIKGIPAFDL  108 (318)
T ss_pred             HHHHHcCCCHHHCC-------EEEEECCCCC-------------------------CCCChHHHHHHHHhCCCCCcEeeh
Confidence            99999999864322       5666654210                         111234688999999998 89999


Q ss_pred             cccchHHHHHHHHHHHHHHhcccc-eEeeccCC
Q 024765          229 STACASSNYSILNATSHIIKGDTV-SNSPSSQA  260 (263)
Q Consensus       229 ~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~  260 (263)
                      ..+|+|++.||+.|+++|++|.++ ++|+|+|.
T Consensus       109 ~~~C~s~~~al~~A~~~i~~g~~~~~Lvv~~e~  141 (318)
T TIGR00747       109 SAACAGFIYALSVAKQYIESGKYKTVLVVGAEK  141 (318)
T ss_pred             hhhhHHHHHHHHHHHHHHHcCCCCEEEEEEehh
Confidence            999999999999999999999998 55678775

Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.

>PRK07850 acetyl-CoA acetyltransferase; Provisional

Probab=98.93  E-value=5.9e-09  Score=95.72  Aligned_cols=89  Identities=17%  Similarity=0.081  Sum_probs=67.2

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+.+++.++|+|+|++++.++       .|++|+...                        .+.....++..++...|
T Consensus        27 ~eL~~~a~~~aL~~agi~~~~Id-------~v~~G~~~~------------------------~~~q~~~~ar~~~l~~G   75 (387)
T PRK07850         27 AELLGAVQRAVLDRAGIDPGDVE-------QVIGGCVTQ------------------------AGEQSNNITRTAWLHAG   75 (387)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccc------------------------cccccchHHHHHHHhCC
Confidence            45788999999999999876544       588886420                        00001224556667788


Q ss_pred             CC--CccccccccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          221 WT--GPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       221 l~--Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      +.  =|+++|+++|+||+.||+.|++.|++|++|++ ++|.|.
T Consensus        76 l~~~~p~~tV~~~CaSG~~A~~~A~~~I~sG~~dvvla~G~E~  118 (387)
T PRK07850         76 LPYHVGATTIDCQCGSAQQANHLVAGLIAAGAIDVGIACGVEA  118 (387)
T ss_pred             CCCCCceEEEecccccHHHHHHHHHHHHHCCCCCEEEEEeEec
Confidence            86  38999999999999999999999999999965 566664

>PRK09052 acetyl-CoA acetyltransferase; Provisional

Probab=98.93  E-value=7.9e-09  Score=95.22  Aligned_cols=88  Identities=16%  Similarity=0.135  Sum_probs=65.7

Q ss_pred             HHHHHHHHHHHHHHc-CCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 024765          141 LIYALVAGKKALVDA-GITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (263)
Q Consensus       141 ~~l~l~aa~~Al~dA-Gl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l  219 (263)
                      ..|+.+++++||+++ |++++.++       .|++|+....                        .......+..+....
T Consensus        32 ~eLa~~A~~~AL~~a~gl~~~dID-------~vi~g~~~~~------------------------~~~~~~~ar~~~~~~   80 (399)
T PRK09052         32 DDLLAHVLRSAVAQVPGLDPKLIE-------DAIVGCAMPE------------------------AEQGLNVARIGALLA   80 (399)
T ss_pred             HHHHHHHHHHHHHhccCcCHHHCC-------EEEEEecCCC------------------------CCCCchHHHHHHHHc
Confidence            457899999999997 99876544       6889875311                        011122333345566


Q ss_pred             CCC--CccccccccchHHHHHHHHHHHHHHhcccceE-eeccC
Q 024765          220 GWT--GPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQ  259 (263)
Q Consensus       220 gl~--Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae  259 (263)
                      |+.  -|+++|+++|+||+.||+.|+++|++|++|++ |+|.|
T Consensus        81 Gl~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLv~G~E  123 (399)
T PRK09052         81 GLPNSVGGVTVNRFCASGLQAVAMAADRIRVGEADVMIAAGVE  123 (399)
T ss_pred             CCCCCCceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEe
Confidence            886  37999999999999999999999999999955 56666

>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=98.92  E-value=2.1e-08  Score=90.31  Aligned_cols=144  Identities=19%  Similarity=0.160  Sum_probs=93.0

Q ss_pred             CCCcEEEEecceeCCcC-CCHHHHHHHHHcCC--CceeeCCCCC-CCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHH
Q 024765           68 KERRIVVTGLGAVTPLG-DDAHLFHTSLLEGV--TGISDIQGFD-CSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIY  143 (263)
Q Consensus        68 ~~~~VaItG~g~~~p~g-~~~~~~w~~L~~G~--~~i~~~~~~~-~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l  143 (263)
                      ....|.|+|+|...|.- .+-+++.+.+...-  .++.+ .++. .-+...+.      |.     .+.     .....|
T Consensus         2 ~~~~v~I~~~g~~lP~~~v~~~~~~~~~~~~~~~~~~~~-~~i~~~~Gi~~R~------~~-----~~~-----~~~~~l   64 (338)
T PRK09258          2 KYSNVAILSLAYELAPVVVTSSEIEERLAPLYERLRLPP-GQLEALTGIRERR------WW-----PEG-----TQLSDG   64 (338)
T ss_pred             cccceEEEEEEecCCCccCcHHHHHHHhhhcccccCCCh-hHhhhhcCceeEe------cC-----CCC-----CCHHHH
Confidence            34568999999999987 56666666543211  11110 0000 00001100      10     000     113578


Q ss_pred             HHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCCC
Q 024765          144 ALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTG  223 (263)
Q Consensus       144 ~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G  223 (263)
                      +.+++++||+++|+.++.++       .|++++...                         .......+.+|+..+|++.
T Consensus        65 a~~Aa~~aL~~ag~~~~~Id-------~li~~s~~~-------------------------~~~~p~~a~~v~~~lgl~~  112 (338)
T PRK09258         65 AIAAGRKALAEAGIDPSDIG-------LLINTSVCR-------------------------DYLEPATACRVHHNLGLPK  112 (338)
T ss_pred             HHHHHHHHHHHcCCCHHHCC-------EEEEEcCCC-------------------------CCCCChHHHHHHHHcCCCC
Confidence            99999999999999854322       456665421                         1111246788999999964


Q ss_pred             --ccccccccchHHHHHHHHHHHHHHhcccc-eEeeccCC
Q 024765          224 --PSYSISTACASSNYSILNATSHIIKGDTV-SNSPSSQA  260 (263)
Q Consensus       224 --p~~tv~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~  260 (263)
                        +.+.|.++|+|++.||++|..+|++|.++ ++|+|+|.
T Consensus       113 ~~~~~~v~~~C~~~~~al~~A~~~i~~g~~~~~Lvv~~e~  152 (338)
T PRK09258        113 SCANFDVSNACLGFLNGMLDAANMIELGQIDYALVVSGES  152 (338)
T ss_pred             CCceeehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence              78999999999999999999999999997 56788874

>PRK09050 beta-ketoadipyl CoA thiolase; Validated

Probab=98.92  E-value=7.8e-09  Score=95.27  Aligned_cols=89  Identities=18%  Similarity=0.154  Sum_probs=68.4

Q ss_pred             HHHHHHHHHHHHH-HcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 024765          141 LIYALVAGKKALV-DAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (263)
Q Consensus       141 ~~l~l~aa~~Al~-dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l  219 (263)
                      ..|+.++..++|+ ++|++++.++       .|++|+...                        .+.....++..++...
T Consensus        27 ~~L~~~a~~~al~~~agi~~~~Id-------~v~~G~~~~------------------------~~~~~~~~ar~~~~~~   75 (401)
T PRK09050         27 DDLGAVPLKALMARNPGVDWEAVD-------DVIYGCANQ------------------------AGEDNRNVARMSALLA   75 (401)
T ss_pred             HHHHHHHHHHHHHhccCCCHHHCC-------EEEEEeccc------------------------cccccchHHHHHHHHc
Confidence            4578889999999 6899875443       589987531                        0111134566789999


Q ss_pred             CCC--CccccccccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          220 GWT--GPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       220 gl~--Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      |+.  =|+++|+++|+||+.|++.|+++|++|++|++ ++|.|.
T Consensus        76 Gl~~~vP~~tV~~aCaSG~~Ai~~A~~~I~sG~~dvvlagGvEs  119 (401)
T PRK09050         76 GLPVSVPGTTINRLCGSGMDAVGTAARAIKAGEAELMIAGGVES  119 (401)
T ss_pred             CCCCCCceEEEecccccHHHHHHHHHHHHHCCCCCEEEEecccc
Confidence            994  49999999999999999999999999999966 566663

>PLN02287 3-ketoacyl-CoA thiolase

Probab=98.91  E-value=1.4e-08  Score=94.90  Aligned_cols=88  Identities=14%  Similarity=0.187  Sum_probs=66.9

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+.+++++||+|+|++++.++       +|++|+.....                        ......+..++.++|
T Consensus        72 ~eLa~eA~~~AL~dAgl~~~dID-------~vv~G~~~~~~------------------------~~~~~~~r~~a~~~G  120 (452)
T PLN02287         72 DDLLAPVLKAVVEKTGLNPSEVG-------DIVVGTVLAPG------------------------SQRANECRMAAFYAG  120 (452)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeecCcc------------------------cccchHHHHHHHHCC
Confidence            45789999999999999865443       67888753110                        011223345677789


Q ss_pred             CCC--ccccccccchHHHHHHHHHHHHHHhcccceE-eeccC
Q 024765          221 WTG--PSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQ  259 (263)
Q Consensus       221 l~G--p~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae  259 (263)
                      +.+  |+++|+++|+||+.||+.|+++|++|.+|++ |+|.|
T Consensus       121 l~~~~pa~~V~~~CaSG~~Ai~~Aa~~I~sG~~dvvLv~GvE  162 (452)
T PLN02287        121 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGVE  162 (452)
T ss_pred             CCCCcceEEEeccCchHHHHHHHHHHHHHcCCCCeEEEEeEE
Confidence            975  8899999999999999999999999999966 45565

>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=98.89  E-value=1.2e-08  Score=91.52  Aligned_cols=89  Identities=21%  Similarity=0.163  Sum_probs=69.7

Q ss_pred             HHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 024765          140 YLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (263)
Q Consensus       140 ~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l  219 (263)
                      ...|+.+++.+||+++|+.++.++       .|++++..+.                         ......+.+|+..+
T Consensus        52 ~~~la~~Aa~~aL~~ag~~~~dId-------~li~~~~~~~-------------------------~~~p~~a~~v~~~l   99 (329)
T PRK07204         52 SSYMGAEAAKKAVEDAKLTLDDID-------CIICASGTIQ-------------------------QAIPCTASLIQEQL   99 (329)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEECCCCC-------------------------CCCccHHHHHHHHh
Confidence            357999999999999999864322       3566654311                         01125578899999


Q ss_pred             CCCC---ccccccccchHHHHHHHHHHHHHHhcccc-eEeeccCC
Q 024765          220 GWTG---PSYSISTACASSNYSILNATSHIIKGDTV-SNSPSSQA  260 (263)
Q Consensus       220 gl~G---p~~tv~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~  260 (263)
                      |+++   |++.|+.+|+|++.||.+|..+|+.|.++ ++|+|+|.
T Consensus       100 gl~~~~~~~~~v~~~C~~~~~al~~a~~~l~~g~~~~~Lvv~~e~  144 (329)
T PRK07204        100 GLQHSGIPCFDINSTCLSFITALDTISYAIECGRYKRVLIISSEI  144 (329)
T ss_pred             CCCCCCceEEEccchhHHHHHHHHHHHHHHHCCCCCEEEEEEecc
Confidence            9985   89999999999999999999999999997 66788874

>PRK06504 acetyl-CoA acetyltransferase; Provisional

Probab=98.88  E-value=1.2e-08  Score=93.72  Aligned_cols=88  Identities=15%  Similarity=0.110  Sum_probs=62.9

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+.++..++|+++|++++.++       .|++|+....                        +.....++..+...-|
T Consensus        27 ~~L~~~a~~~al~~a~l~~~~Id-------~vi~G~~~~~------------------------~~~~~~~ar~~~l~~g   75 (390)
T PRK06504         27 ADLAAQVLDALVDRSGADPALIE-------DVIMGCVSQV------------------------GEQATNVARNAVLASK   75 (390)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecccc------------------------ccccccHHHHHHHHcC
Confidence            45788999999999999876544       6888865310                        0000112222223335


Q ss_pred             C--CCccccccccchHHHHHHHHHHHHHHhcccceE-eeccC
Q 024765          221 W--TGPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQ  259 (263)
Q Consensus       221 l--~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae  259 (263)
                      |  .=|.++|+.+|+||+.|+..|++.|++|++|++ ++|.|
T Consensus        76 l~~~vP~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvLagGvE  117 (390)
T PRK06504         76 LPESVPGTSIDRQCGSSQQALHFAAQAVMSGTMDIVIAAGVE  117 (390)
T ss_pred             CCCCCceEEEechhhHHHHHHHHHHHHHHCCCCCEEEEeeee
Confidence            5  459999999999999999999999999999966 55655

>PRK08242 acetyl-CoA acetyltransferase; Validated

Probab=98.87  E-value=1.4e-08  Score=93.52  Aligned_cols=89  Identities=13%  Similarity=0.068  Sum_probs=66.8

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+.+++.++|+++|++++.++       -|++|+....                        +.....++..++...|
T Consensus        29 ~dLa~~A~~~al~~agi~p~~ID-------~vi~G~~~~~------------------------~~~~~~~~r~a~~~~G   77 (402)
T PRK08242         29 VRLAAGLLEALRDRNGLDTAAVD-------DVVLGCVTPV------------------------GDQGADIARTAVLAAG   77 (402)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHcC-------EEEEEecCCC------------------------ccccccHHHHHHHHcC
Confidence            34678899999999999875433       5788876310                        0011234455667778


Q ss_pred             CC--CccccccccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          221 WT--GPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       221 l~--Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      +.  -|+++|+.+|+||+.||+.|+++|++|..|++ ++|+|.
T Consensus        78 l~~~~pa~~Vn~aCaSg~~Ai~~A~~~I~sG~~d~vLv~G~E~  120 (402)
T PRK08242         78 LPETVPGVQINRFCASGLEAVNLAAAKVRSGWDDLVIAGGVES  120 (402)
T ss_pred             CCCCCCeEEEcchhhhHHHHHHHHHHHHHcCCCCEEEEEEEEc
Confidence            83  48999999999999999999999999999965 666663

>PRK06064 acetyl-CoA acetyltransferase; Provisional

Probab=98.86  E-value=9.6e-09  Score=94.45  Aligned_cols=90  Identities=24%  Similarity=0.287  Sum_probs=69.7

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+.+++.+||+|||++++.++       +|++|+..++..                     ..  ....+..++..+|
T Consensus        23 ~eLa~~a~~~Al~dagl~~~~Id-------~vi~g~~~~~~~---------------------~~--~~~~a~~va~~lG   72 (389)
T PRK06064         23 RDLAVEAGLEALEDAGIDGKDID-------AMYVGNMSAGLF---------------------VS--QEHIAALIADYAG   72 (389)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecccccc---------------------cc--cccHHHHHHHHcC
Confidence            56789999999999999865432       688887532211                     00  0124678999999


Q ss_pred             CC-CccccccccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          221 WT-GPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       221 l~-Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      ++ +|+++|+++|+|++.||..|+++|++|++|++ |+|+|.
T Consensus        73 l~~~~~~~v~~aCasg~~ai~~A~~~I~sG~~~~vLv~G~e~  114 (389)
T PRK06064         73 LAPIPATRVEAACASGGAALRQAYLAVASGEADVVLAAGVEK  114 (389)
T ss_pred             CCCCCeeEEeCCcHHHHHHHHHHHHHHHCCCCCEEEEEEEEe
Confidence            98 69999999999999999999999999999965 556663

>PRK06059 lipid-transfer protein; Provisional

Probab=98.83  E-value=1.4e-08  Score=93.65  Aligned_cols=89  Identities=28%  Similarity=0.362  Sum_probs=67.6

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+.+++++||+|||++++.++       .|++|+...                        ........+..++..+|
T Consensus        24 ~~La~~A~~~Al~dAgl~~~dId-------~vi~~~~~~------------------------~~~~~~~~a~~va~~lG   72 (399)
T PRK06059         24 VEYGVVAARAALADAGLDWRDVQ-------LVVGADTIR------------------------NGYPGFVAGATFAQALG   72 (399)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccC------------------------CccCCccHHHHHHHHhC
Confidence            46789999999999999854322       455554321                        00111234567999999


Q ss_pred             CCC-ccccccccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          221 WTG-PSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       221 l~G-p~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      +++ |.++|+++|+|++.||..|+++|++|++|.+ |+|+|.
T Consensus        73 ~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~~~vLvvg~e~  114 (399)
T PRK06059         73 WNGAPVSSSYAACASGSQALQSARAQILAGLCDVALVVGADT  114 (399)
T ss_pred             CCCCceecccchhHHHHHHHHHHHHHHHCCCCCEEEEEEEcc
Confidence            988 8999999999999999999999999999855 567774

>PRK06366 acetyl-CoA acetyltransferase; Provisional

Probab=98.81  E-value=1.7e-08  Score=92.79  Aligned_cols=88  Identities=18%  Similarity=0.215  Sum_probs=69.4

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+.+++.+||+|+|++++.++       +|++|+....                        + ....++..++..+|
T Consensus        27 ~~L~~~a~~~al~dagi~~~dID-------~vi~g~~~~~------------------------~-~~~~~a~~~~~~~G   74 (388)
T PRK06366         27 PQLGGAAIKAVIDDAKLDPALVQ-------EVIMGNVIQA------------------------G-VGQNPAGQAAYHAG   74 (388)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCCC------------------------C-ccCcHHHHHHHHCC
Confidence            45789999999999999876544       7888865210                        0 01123566889999


Q ss_pred             CCC--ccccccccchHHHHHHHHHHHHHHhcccceEeecc-CC
Q 024765          221 WTG--PSYSISTACASSNYSILNATSHIIKGDTVSNSPSS-QA  260 (263)
Q Consensus       221 l~G--p~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~v~Ga-e~  260 (263)
                      +..  |.++|+++|+||+.||..|+++|++|++|++++|. |.
T Consensus        75 l~~~~p~~~v~~~caSg~~av~~Aa~~I~sG~~d~vla~G~e~  117 (388)
T PRK06366         75 LPFGVTKYTVNVVCASGMLAVESAAREIMLGERDLVIAGGMEN  117 (388)
T ss_pred             CCCCCcceeeechhhHHHHHHHHHHHHHhcCCCCEEEEEeeEc
Confidence            975  99999999999999999999999999999776655 64

>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems

Probab=98.80  E-value=6.6e-08  Score=86.18  Aligned_cols=136  Identities=21%  Similarity=0.254  Sum_probs=90.1

Q ss_pred             EEEEecceeCCcC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHHHH
Q 024765           72 IVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGKK  150 (263)
Q Consensus        72 VaItG~g~~~p~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa~~  150 (263)
                      +.|+|+|...|.- .+.+++.+.+  |.+ ...+  +...++..+.   +        ..+.     .....|+.+++.+
T Consensus         2 ~~I~~i~~~lP~~~~~~~~~~~~~--~~~-~~~~--~~~~Gi~~r~---~--------~~~~-----~~~~~la~~A~~~   60 (320)
T cd00830           2 ARILGIGSYLPERVVTNDELEKRL--DTS-DEWI--RTRTGIRERR---I--------ADPG-----ETTSDLAVEAAKK   60 (320)
T ss_pred             CEEEEEEEECCCcEEcHHHHHHHc--CCC-HHHh--hhccCceEEe---e--------CCCC-----CCHHHHHHHHHHH
Confidence            6799999999987 5667776665  211 0000  0000110000   0        0000     2247789999999


Q ss_pred             HHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCC-CCcccccc
Q 024765          151 ALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGW-TGPSYSIS  229 (263)
Q Consensus       151 Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl-~Gp~~tv~  229 (263)
                      ||+++|++++.++       .|++++....                         ......+.+|+..+|+ +.|++.|+
T Consensus        61 al~~ag~~~~~Id-------~li~~~~~~~-------------------------~~~~~~~~~l~~~lg~~~~~~~~v~  108 (320)
T cd00830          61 ALEDAGIDADDID-------LIIVATSTPD-------------------------YLFPATACLVQARLGAKNAAAFDIN  108 (320)
T ss_pred             HHHHcCCCHHHCC-------EEEEEcCCCC-------------------------CCCCcHHHHHHHHhCCCCCcEeecc
Confidence            9999999854322       4666654211                         0012356889999999 66889999


Q ss_pred             ccchHHHHHHHHHHHHHHhcccc-eEeeccCC
Q 024765          230 TACASSNYSILNATSHIIKGDTV-SNSPSSQA  260 (263)
Q Consensus       230 tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~  260 (263)
                      .+|+|++.||.+|+++|+.|.++ ++|+|+|.
T Consensus       109 ~~C~s~~~al~~A~~~i~~g~~~~vLvv~~e~  140 (320)
T cd00830         109 AACSGFLYGLSTAAGLIRSGGAKNVLVVGAET  140 (320)
T ss_pred             ccchHHHHHHHHHHHHHHcCCCCEEEEEEehh
Confidence            99999999999999999999998 45677775

It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.

>PRK08256 lipid-transfer protein; Provisional

Probab=98.80  E-value=1.9e-08  Score=92.51  Aligned_cols=85  Identities=22%  Similarity=0.360  Sum_probs=63.8

Q ss_pred             HHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 024765          140 YLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (263)
Q Consensus       140 ~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l  219 (263)
                      ...|+.+++++||+|||++++.   ++    ++++|+..+...                         .   ...+...+
T Consensus        22 ~~~La~~A~~~Al~dAGl~~~d---ID----~~~~g~~~~~~~-------------------------~---~~~~~~~l   66 (391)
T PRK08256         22 YPDMAAEAGRAALADAGIDYDA---VQ----QAYVGYVYGDST-------------------------S---GQRALYEV   66 (391)
T ss_pred             HHHHHHHHHHHHHHHcCCChHH---CC----eeEEEEEeCCcc-------------------------h---hHHHHHHc
Confidence            3578999999999999998643   33    355554321100                         0   01255678


Q ss_pred             CCCC-ccccccccchHHHHHHHHHHHHHHhcccceEe-eccC
Q 024765          220 GWTG-PSYSISTACASSNYSILNATSHIIKGDTVSNS-PSSQ  259 (263)
Q Consensus       220 gl~G-p~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~v-~Gae  259 (263)
                      |++| |+++|+++|+|++.||..|+++|++|++|.+| +|.|
T Consensus        67 Gl~~~~~~~v~~~caSg~~ai~~A~~~I~sG~~d~vLv~g~e  108 (391)
T PRK08256         67 GMTGIPIVNVNNNCSTGSTALFLARQAVRSGAADCALALGFE  108 (391)
T ss_pred             CCCCCCCcccccccHHHHHHHHHHHHHHHCCCCCEEEEEEEe
Confidence            9999 99999999999999999999999999999664 4555

>PRK12578 acetyl-CoA acetyltransferase; Provisional

Probab=98.80  E-value=2.1e-08  Score=92.08  Aligned_cols=88  Identities=22%  Similarity=0.205  Sum_probs=68.7

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+.+++++||+|||++++.++       +|++|+....                        + ....++..++..+|
T Consensus        22 ~eLa~~A~~~AL~dAgi~~~dID-------~vi~g~~~~~------------------------~-~~~~~a~~v~~~lG   69 (385)
T PRK12578         22 QELAWESIKEALNDAGVSQTDIE-------LVVVGSTAYR------------------------G-IELYPAPIVAEYSG   69 (385)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecccc------------------------c-ccCChHHHHHHHhC
Confidence            56889999999999999865433       6788865310                        0 00123567999999


Q ss_pred             CCC-ccccccccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          221 WTG-PSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       221 l~G-p~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      +.+ +.++|+++|+|++.||+.|+++|++|++|.+ |+|+|.
T Consensus        70 l~~~~~~~v~~~casg~~al~~A~~~I~sG~~~~vLvvg~e~  111 (385)
T PRK12578         70 LTGKVPLRVEAMCATGLAASLTAYTAVASGLVDMAIAVGVDK  111 (385)
T ss_pred             CCCCCeeEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEee
Confidence            976 7789999999999999999999999999965 577764

>PRK05656 acetyl-CoA acetyltransferase; Provisional

Probab=98.80  E-value=1.8e-08  Score=92.84  Aligned_cols=87  Identities=17%  Similarity=0.231  Sum_probs=69.1

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+.+++++||+|+|++++.++       .|++|+....                        ...++ ++..++..+|
T Consensus        27 ~~La~~A~~~AL~~agl~~~dID-------~vi~g~~~~~------------------------~~~~~-~a~~va~~lG   74 (393)
T PRK05656         27 VELGAAVIRRLLEQTGLDPAQVD-------EVILGQVLTA------------------------GAGQN-PARQAAIKAG   74 (393)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEEecCC------------------------CCCCc-HHHHHHHHcC
Confidence            45789999999999999875433       7888875310                        01122 5567999999


Q ss_pred             CC--CccccccccchHHHHHHHHHHHHHHhcccceE-eeccC
Q 024765          221 WT--GPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQ  259 (263)
Q Consensus       221 l~--Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae  259 (263)
                      +.  -|+++|+++|+|++.||+.|+++|++|.+|++ |+|+|
T Consensus        75 l~~~~p~~~V~~~Casg~~ai~~A~~~I~sG~~d~vLv~G~E  116 (393)
T PRK05656         75 LPHSVPAMTLNKVCGSGLKALHLAAQAIRCGDAEVIIAGGQE  116 (393)
T ss_pred             CCCCcceEEecccchhHHHHHHHHHHHHHcCCCCEEEEEEEh
Confidence            97  49999999999999999999999999999965 56666

>PRK06157 acetyl-CoA acetyltransferase; Validated

Probab=98.79  E-value=2e-08  Score=92.61  Aligned_cols=88  Identities=17%  Similarity=0.153  Sum_probs=66.9

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+.+++++||+|+|++++.++       +|++|+....+.                     .+    .....++..+|
T Consensus        28 ~~L~~ea~~~AL~dagl~~~dID-------~v~vg~~~~~~~---------------------~~----~~~~~~a~~lG   75 (398)
T PRK06157         28 EDLMVEAFLEALADAGIEPKDID-------AAWFGTHYDEIG---------------------SG----KSGTPLSRALR   75 (398)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecccccc---------------------cc----chhHHHHHHcC
Confidence            46789999999999999875543       688886421000                     00    01234777899


Q ss_pred             CCC-ccccccccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          221 WTG-PSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       221 l~G-p~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      +.+ |+++|+++|+|++.||++|+.+|++|++|++ ++|+|.
T Consensus        76 l~~~~~~~v~~~c~sg~~ai~~A~~~I~sG~~d~vlv~G~e~  117 (398)
T PRK06157         76 LPNIPVTRVENFCATGSEAFRGAVYAVASGAYDIALALGVEK  117 (398)
T ss_pred             CCCCCEEEEecccHHHHHHHHHHHHHHHCCCCCEEEEEEEee
Confidence            977 7889999999999999999999999999966 477764

>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=98.78  E-value=4.8e-08  Score=87.39  Aligned_cols=138  Identities=20%  Similarity=0.199  Sum_probs=90.8

Q ss_pred             CcEEEEecceeCCcC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHH
Q 024765           70 RRIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (263)
Q Consensus        70 ~~VaItG~g~~~p~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa  148 (263)
                      .+|.|.|+|...|.- .+.+++.+.+......+.  ++   .+...+.   +        ..+.     .....|+.+++
T Consensus         3 ~~~~I~~ig~~~P~~~v~~~e~~~~~~~~~~~i~--~~---~Gi~~r~---~--------~~~~-----~~~~~la~~A~   61 (325)
T PRK12879          3 SYARITGIGTYVPPRVLTNDDLETFIDTSDEWIV--QR---TGIKERR---I--------AHVE-----EYTSDLAIKAA   61 (325)
T ss_pred             CCCEEEEEEEECCCcEEcHHHHHHhcCCCHHHhh--hc---cCceEEE---E--------CCCC-----CCHHHHHHHHH
Confidence            358899999999987 566776654321100000  00   0111111   0        0000     12467899999


Q ss_pred             HHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCC-Ccccc
Q 024765          149 KKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWT-GPSYS  227 (263)
Q Consensus       149 ~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-Gp~~t  227 (263)
                      .+||+++|++++.++       .|++++...+                         ......+.+|+..+|++ .+++.
T Consensus        62 ~~al~~ag~~~~~Id-------~li~~~~~~~-------------------------~~~~~~a~~l~~~lg~~~~~~~~  109 (325)
T PRK12879         62 ERALARAGLDAEDID-------LIIVATTTPD-------------------------YLFPSTASQVQARLGIPNAAAFD  109 (325)
T ss_pred             HHHHHHcCCCHHHCC-------EEEEEcCCCC-------------------------CCCChHHHHHHHHhCCCCCcEEE
Confidence            999999999864322       4566654211                         11124568899999997 58999


Q ss_pred             ccccchHHHHHHHHHHHHHHhcccc-eEeeccCC
Q 024765          228 ISTACASSNYSILNATSHIIKGDTV-SNSPSSQA  260 (263)
Q Consensus       228 v~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~  260 (263)
                      |+.+|+|++.||..|.++|++|.++ ++|+|+|.
T Consensus       110 v~~~C~~~~~al~~A~~~l~~g~~~~~Lvv~~e~  143 (325)
T PRK12879        110 INAACAGFLYGLETANGLITSGLYKKVLVIGAER  143 (325)
T ss_pred             ECccchHHHHHHHHHHHHHHcCCCCEEEEEEehh
Confidence            9999999999999999999999997 55677774

>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine

Probab=98.77  E-value=2.7e-08  Score=91.36  Aligned_cols=88  Identities=17%  Similarity=0.176  Sum_probs=68.4

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+.+++++||+|||++++.++       +|++|+..+..                      .  .+ ..+..++..+|
T Consensus        23 ~~La~~A~~~AL~dAgl~~~dID-------~vi~~~~~~~~----------------------~--~~-~~a~~v~~~lG   70 (386)
T cd00751          23 DDLGAAVIKALLERAGLDPEEVD-------DVIMGNVLQAG----------------------E--GQ-NPARQAALLAG   70 (386)
T ss_pred             HHHHHHHHHHHHHhcCCCHHHCC-------EEEEEeccCCC----------------------C--CC-hHHHHHHHHcC
Confidence            67899999999999999865433       67777643110                      0  11 24567999999


Q ss_pred             CCC--ccccccccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          221 WTG--PSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       221 l~G--p~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      ++.  |++.|+++|+|++.||..|+.+|++|++|.+ |+|+|.
T Consensus        71 l~~~~~~~~v~~~c~s~~~al~~A~~~I~sG~~~~vLv~g~e~  113 (386)
T cd00751          71 LPESVPATTVNRVCGSGLQAVALAAQSIAAGEADVVVAGGVES  113 (386)
T ss_pred             CCCCCchhhhccccHHHHHHHHHHHHHHHCCCCCeEEEeeeec
Confidence            975  9999999999999999999999999999965 455563

They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.

>PRK08170 acetyl-CoA acetyltransferase; Provisional

Probab=98.74  E-value=4.1e-08  Score=91.34  Aligned_cols=87  Identities=24%  Similarity=0.313  Sum_probs=68.6

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+.+++.+||+|||++++.++       +|++|+....                       ..  ...++..++..+|
T Consensus        28 ~~L~~~A~~~Al~dAgl~~~dID-------~vi~g~~~~~-----------------------~~--~~~~a~~v~~~lG   75 (426)
T PRK08170         28 SDLAVAAGRALLNRQPFAPDDLD-------EVILGCAMPS-----------------------PD--EANIARVVALRLG   75 (426)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccCC-----------------------CC--cChHHHHHHHHhC
Confidence            45789999999999999875444       7888865210                       00  1135567889999


Q ss_pred             CC--CccccccccchHHHHHHHHHHHHHHhcccceE-eeccC
Q 024765          221 WT--GPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQ  259 (263)
Q Consensus       221 l~--Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae  259 (263)
                      +.  -|.++|+++|+|++.||+.|+++|++|.+|.+ ++|.|
T Consensus        76 l~~~~p~~~v~~~CaSg~~al~~A~~~I~sG~~d~vLv~G~E  117 (426)
T PRK08170         76 CGEKVPAWTVQRNCASGMQALDSAAANIALGRADLVLAGGVE  117 (426)
T ss_pred             cCCCceeeeccchhhHHHHHHHHHHHHHHCCCCCEEEEEEEe
Confidence            95  39999999999999999999999999999955 56666

>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=98.72  E-value=1.7e-07  Score=85.97  Aligned_cols=89  Identities=17%  Similarity=0.121  Sum_probs=69.1

Q ss_pred             HHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 024765          140 YLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (263)
Q Consensus       140 ~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l  219 (263)
                      ...|+.+++.+||+++|++++.++       .+++++..++                        ...+ ..+..|...+
T Consensus        63 ~~~La~~A~~~aL~~agi~~~dId-------~li~~s~~~~------------------------~~~p-~~a~~v~~~L  110 (378)
T PRK06816         63 NAQMAAEAIRDLLDDAGFSLGDIE-------LLACGTSQPD------------------------QLMP-GHASMVHGEL  110 (378)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEECCCC------------------------cCCh-HHHHHHHhhC
Confidence            467899999999999999864322       4677765311                        0112 3356888999


Q ss_pred             CCCC-ccccccccchHHHHHHHHHHHHHHhcccc-eEeeccCC
Q 024765          220 GWTG-PSYSISTACASSNYSILNATSHIIKGDTV-SNSPSSQA  260 (263)
Q Consensus       220 gl~G-p~~tv~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~  260 (263)
                      |+++ |++.|+.+|+|++.||+.|.++|+.|..+ ++|+|+|.
T Consensus       111 gl~~~~~~~v~~~Cas~~~al~~A~~~i~sg~~~~vLvv~~E~  153 (378)
T PRK06816        111 GAPPIEVVSSAGVCAAGMMALKYAYLSVKAGESRNAVATASEL  153 (378)
T ss_pred             CCCCCceeeecCcCHHHHHHHHHHHHHHHCCCCCEEEEEeEcc
Confidence            9876 88999999999999999999999999997 56788774

>PRK04262 hypothetical protein; Provisional

Probab=98.72  E-value=1e-07  Score=86.38  Aligned_cols=137  Identities=18%  Similarity=0.207  Sum_probs=89.4

Q ss_pred             cEEEEecceeCCcC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHHH
Q 024765           71 RIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGK  149 (263)
Q Consensus        71 ~VaItG~g~~~p~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa~  149 (263)
                      .|-|+|+|...|.- .+.+++-+.+-.....|.+.     .+...+.   +        .++     -.....|+.+|+.
T Consensus         2 ~v~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~-----~Gi~~R~---~--------~~~-----~~~~~~la~~Aa~   60 (347)
T PRK04262          2 MVGIVGYGAYIPRYRIKVEEIARVWGDDPEAIKRG-----LGVEEKS---V--------PGP-----DEDTATIAVEAAR   60 (347)
T ss_pred             ceeEEEEEEeCCCEEecHHHHHHHhCcCHHHHhhc-----cCeeeee---c--------CCC-----CcCHHHHHHHHHH
Confidence            47899999999987 57777766542111000000     0100000   0        001     1123678999999


Q ss_pred             HHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCCC--cccc
Q 024765          150 KALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTG--PSYS  227 (263)
Q Consensus       150 ~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G--p~~t  227 (263)
                      +||++||++++.++       .|++++..+..                        ..+ ..+.+|+..+|++.  +++.
T Consensus        61 ~aL~~ag~~~~dId-------~li~~s~~~~~------------------------~~p-~~a~~v~~~Lgl~~~~~~~d  108 (347)
T PRK04262         61 NALKRAGIDPKEIG-------AVYVGSESHPY------------------------AVK-PTATIVAEALGATPDLTAAD  108 (347)
T ss_pred             HHHHHcCCCHHHCC-------EEEEEecCCCc------------------------ccc-cHHHHHHHHcCCCCCceEEE
Confidence            99999999864322       46666542110                        111 23568899999975  6788


Q ss_pred             ccccchHHHHHHHHHHHHHHhcccc-eEeeccCC
Q 024765          228 ISTACASSNYSILNATSHIIKGDTV-SNSPSSQA  260 (263)
Q Consensus       228 v~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~  260 (263)
                      +..+|++++.||+.|..+|++|.++ ++|+|+|.
T Consensus       109 v~~~C~~~~~aL~~A~~~i~sg~~~~aLVv~~e~  142 (347)
T PRK04262        109 LEFACKAGTAALQAAMGLVKSGMIKYALAIGADT  142 (347)
T ss_pred             HHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEee
Confidence            9999999999999999999999998 55678774

>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional

Probab=98.70  E-value=2.3e-07  Score=83.31  Aligned_cols=136  Identities=17%  Similarity=0.165  Sum_probs=88.7

Q ss_pred             cEEEEecceeCCcC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHHH
Q 024765           71 RIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGK  149 (263)
Q Consensus        71 ~VaItG~g~~~p~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa~  149 (263)
                      .|-|+|+|...|.- .+-+++-+.+......|.  .+.   +...+.           +..+.     .....|+.+++.
T Consensus         2 ~v~I~~~g~~lP~~~v~~~e~~~~~~~~~~~i~--~~~---gi~~r~-----------~~~~~-----~~~~~la~~A~~   60 (326)
T CHL00203          2 GVHILSTGSSVPNFSVENQQFEDIIETSDHWIS--TRT---GIKKRH-----------LAPSS-----TSLTKLAAEAAN   60 (326)
T ss_pred             ccEEEEEEEECCCeEEcHHHHHHhcCCChhhEe--ecc---CeEEEE-----------eCCCC-----CCHHHHHHHHHH
Confidence            36799999999988 566666555421111111  110   111111           00000     123668999999


Q ss_pred             HHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCCC-ccccc
Q 024765          150 KALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTG-PSYSI  228 (263)
Q Consensus       150 ~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv  228 (263)
                      +||+++|++++.++       .|++|++....                     .   .  ..+..+...+|+++ +++.|
T Consensus        61 ~aL~~ag~~~~dId-------~vi~~s~~~~~---------------------~---~--~~~~~v~~~Lg~~~~~~~~v  107 (326)
T CHL00203         61 KALDKAHMDPLEID-------LIILATSTPDD---------------------L---F--GSASQLQAEIGATRAVAFDI  107 (326)
T ss_pred             HHHHHcCCCHHHCC-------EEEEEeCCCCC---------------------C---C--chHHHHHHHhCCCCCceeee
Confidence            99999999864433       46666543100                     0   0  12457889999876 67899


Q ss_pred             cccchHHHHHHHHHHHHHHhcccc-eEeeccCC
Q 024765          229 STACASSNYSILNATSHIIKGDTV-SNSPSSQA  260 (263)
Q Consensus       229 ~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~  260 (263)
                      ..+|+|++.||..|.++|++|.++ ++|+|+|.
T Consensus       108 ~~~Casg~~al~~A~~~i~sg~~~~~Lvv~~e~  140 (326)
T CHL00203        108 TAACSGFILALVTATQFIQNGSYKNILVVGADT  140 (326)
T ss_pred             cccchhHHHHHHHHHHHHHcCCCCEEEEEEehh
Confidence            999999999999999999999997 55788875

>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism

Probab=98.69  E-value=7e-08  Score=88.19  Aligned_cols=89  Identities=27%  Similarity=0.320  Sum_probs=69.8

Q ss_pred             HHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 024765          140 YLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (263)
Q Consensus       140 ~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l  219 (263)
                      ...|+.+++++||+|+|++++.++       +|++|+.....                         ....++..++..+
T Consensus        16 ~~eL~~~A~~~Al~dagl~~~~Id-------~vi~g~~~~~~-------------------------~~~~~a~~va~~l   63 (375)
T cd00829          16 PLELAAEAARAALDDAGLEPADID-------AVVVGNAAGGR-------------------------FQSFPGALIAEYL   63 (375)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEecccccc-------------------------cccchHHHHHHHc
Confidence            367889999999999999864322       67787652100                         0123568899999


Q ss_pred             CC-CCccccccccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          220 GW-TGPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       220 gl-~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      |+ ..|.++|+.+|+|++.+|..|+++|++|++|++ |+|+|.
T Consensus        64 Gl~~~~~~~v~~~c~sg~~al~~Aa~~I~sG~~~~vlv~g~e~  106 (375)
T cd00829          64 GLLGKPATRVEAAGASGSAAVRAAAAAIASGLADVVLVVGAEK  106 (375)
T ss_pred             CCCCcceeeEeCccHHHHHHHHHHHHHHHhCCCCEEEEEEEee
Confidence            99 568999999999999999999999999999965 667764

The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.

>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative

Probab=98.69  E-value=1.5e-07  Score=85.14  Aligned_cols=89  Identities=18%  Similarity=0.187  Sum_probs=68.7

Q ss_pred             HHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 024765          140 YLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (263)
Q Consensus       140 ~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l  219 (263)
                      ...|+++|+.+||+++|++++.++       .+++++..+.                         ......+..|+..+
T Consensus        50 ~~~la~~Aa~~aL~~agl~~~dID-------~li~~s~~~~-------------------------~~~p~~a~~v~~~L   97 (345)
T TIGR00748        50 TATIGVEAARNALKRAKIDPKDIG-------AVYVGSESHP-------------------------YAVKPTATIVAEAI   97 (345)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCCC-------------------------ccccchHHHHHHHc
Confidence            367899999999999999865433       5666654311                         01112356899999


Q ss_pred             CCC--CccccccccchHHHHHHHHHHHHHHhcccc-eEeeccCC
Q 024765          220 GWT--GPSYSISTACASSNYSILNATSHIIKGDTV-SNSPSSQA  260 (263)
Q Consensus       220 gl~--Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~  260 (263)
                      |++  -+++.|..+|+++..||+.|..+|++|.++ ++|+|+|.
T Consensus        98 Gl~~~~~~~dv~~aC~g~~~al~~A~~~i~sg~~~~vLVv~~d~  141 (345)
T TIGR00748        98 GATPDLTAADLEFACKAGTAGIQACMGLVASGMIKYGLAIGADT  141 (345)
T ss_pred             CCCCCceEEEHHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEee
Confidence            985  378999999999999999999999999998 56788874

Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.

>PRK07851 acetyl-CoA acetyltransferase; Provisional

Probab=98.67  E-value=7.2e-08  Score=89.13  Aligned_cols=89  Identities=18%  Similarity=0.126  Sum_probs=67.9

Q ss_pred             HHHHHHHHHHHHHHc-CCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 024765          141 LIYALVAGKKALVDA-GITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (263)
Q Consensus       141 ~~l~l~aa~~Al~dA-Gl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l  219 (263)
                      ..|+.+++++||+|+ |++++.++       +|++|.....                     ...+   ..++..++..+
T Consensus        28 ~eL~~~A~~~AL~da~gl~~~dID-------~vv~g~~~~~---------------------~~~g---~~~~~~~a~~l   76 (406)
T PRK07851         28 DDLAAQMVRAALDKVPALDPTDID-------DLMLGCGLPG---------------------GEQG---FNMARVVAVLL   76 (406)
T ss_pred             HHHHHHHHHHHHHhccCCCHHHCC-------EEEEEccccc---------------------cccc---CCHHHHHHHHc
Confidence            457899999999997 99876544       6788753200                     0000   12456899999


Q ss_pred             CCCC-ccccccccchHHHHHHHHHHHHHHhcccceEe-eccCC
Q 024765          220 GWTG-PSYSISTACASSNYSILNATSHIIKGDTVSNS-PSSQA  260 (263)
Q Consensus       220 gl~G-p~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~v-~Gae~  260 (263)
                      |+.+ |+++|+++|+||+.||+.|+++|++|.+|++| +|.|.
T Consensus        77 Gl~~~p~~~v~~~caSG~~av~~Aa~~I~sG~~d~vLv~G~e~  119 (406)
T PRK07851         77 GYDFLPGTTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVET  119 (406)
T ss_pred             CCCCCCeeeeeccchhHHHHHHHHHHHHHCCCCCEEEEeeEEe
Confidence            9976 88999999999999999999999999999765 45563

>PTZ00455 3-ketoacyl-CoA thiolase; Provisional

Probab=98.66  E-value=8.1e-08  Score=89.50  Aligned_cols=90  Identities=16%  Similarity=0.202  Sum_probs=64.0

Q ss_pred             HHHHHHHHHHHHHHcCCCCcc--cCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHH--
Q 024765          141 LIYALVAGKKALVDAGITEQV--SGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLA--  216 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~--~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia--  216 (263)
                      ..|+.+++++||+|||++++.  ++       +||+|+..+...                     ..  ...++..++  
T Consensus        49 ~eL~~~a~~~al~~agl~~~d~~ID-------~vi~G~~~~~~~---------------------~~--~~~~a~~~~~~   98 (438)
T PTZ00455         49 EELLATAIQGTLENTGLDGKAALVD-------KVVVGNFLGELF---------------------SS--QGHLGPAAVGS   98 (438)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCCcC-------EEEEEecccccc---------------------cc--ccchHHHHHHh
Confidence            457899999999999998653  33       688886532110                     00  011222333  


Q ss_pred             -----HHhCCCC-ccccccccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          217 -----MDLGWTG-PSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       217 -----~~lgl~G-p~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                           ..+|+.+ |+++|+++|+||+.||+.|+++|++|++|++ ++|.|.
T Consensus        99 ~gl~~~~~gl~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~dvvlv~G~E~  149 (438)
T PTZ00455         99 LGQSGASNALLYKPAMRVEGACASGGLAVQSAWEALLAGTSDIALVVGVEV  149 (438)
T ss_pred             ccCcccccccCCCceeEEECcCHHHHHHHHHHHHHHHCCCCCEEEEEEEee
Confidence                 4556644 8999999999999999999999999999966 566663

>PRK08235 acetyl-CoA acetyltransferase; Provisional

Probab=98.66  E-value=8.7e-08  Score=88.23  Aligned_cols=87  Identities=22%  Similarity=0.209  Sum_probs=67.5

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      .-|+.+++.+||+++|++++.++       .|++|+....                      ..   ...++..++..+|
T Consensus        27 ~eLa~~A~~~aL~~agl~~~dID-------~vi~g~~~~~----------------------~~---~~~~~~~~~~~~G   74 (393)
T PRK08235         27 TELGGIAIKEALERANVSAEDVE-------EVIMGTVLQG----------------------GQ---GQIPSRQAARAAG   74 (393)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecccC----------------------CC---CCCHHHHHHHHcC
Confidence            45789999999999999875543       6888875310                      00   1123446788889


Q ss_pred             CC--CccccccccchHHHHHHHHHHHHHHhcccceE-eeccC
Q 024765          221 WT--GPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQ  259 (263)
Q Consensus       221 l~--Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae  259 (263)
                      +.  -|+++|+++|+||+.||+.|+++|++|.+|++ |+|.|
T Consensus        75 l~~~~p~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLvvG~E  116 (393)
T PRK08235         75 IPWEVQTETVNKVCASGLRAVTLADQIIRAGDASVIVAGGME  116 (393)
T ss_pred             CCCCcceeehhhhhhHHHHHHHHHHHHHHCCCCCEEEEEeee
Confidence            84  58999999999999999999999999999954 66776

>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases

Probab=98.66  E-value=9.4e-08  Score=87.84  Aligned_cols=87  Identities=17%  Similarity=0.196  Sum_probs=67.2

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+.+++.+||+|||+++++++       +|++|+.....                        .. ...+..++..+|
T Consensus        22 ~~La~~A~~~Al~dAgl~~~dID-------~vv~g~~~~~~------------------------~~-~~~a~~va~~lG   69 (386)
T TIGR01930        22 EDLGAAVIKELLERNPLDPELID-------DVIFGNVLQAG------------------------EQ-QNIARQAALLAG   69 (386)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccCCC------------------------CC-ChHHHHHHHHcC
Confidence            67899999999999999865433       67777642100                        00 124567889999


Q ss_pred             CC--CccccccccchHHHHHHHHHHHHHHhcccceE-eeccC
Q 024765          221 WT--GPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQ  259 (263)
Q Consensus       221 l~--Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae  259 (263)
                      +.  .|++.|+++|+|++.||..|+++|++|.+|.+ |+|.|
T Consensus        70 l~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~~~vLv~g~e  111 (386)
T TIGR01930        70 LPESVPAYTVNRQCASGLQAVILAAQLIRAGEADVVVAGGVE  111 (386)
T ss_pred             CCCCceeeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEeh
Confidence            96  48999999999999999999999999999965 45545

This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt

>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III

Probab=98.65  E-value=3.3e-07  Score=84.04  Aligned_cols=136  Identities=18%  Similarity=0.169  Sum_probs=88.7

Q ss_pred             CcEEEEecceeCCcC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHH
Q 024765           70 RRIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (263)
Q Consensus        70 ~~VaItG~g~~~p~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa  148 (263)
                      .++.|+|+|...|.- .+.+++-+.+......|.+  +   .++..+.           +..+.     .....|+.+++
T Consensus        46 ~~~~I~g~g~~lP~~~v~n~el~~~~~~~~~~i~~--~---tGi~~R~-----------~~~~~-----~~~~~La~~Aa  104 (379)
T PLN02326         46 SGSKLVGCGSAVPKLLITNDDLSKLVDTSDEWIAT--R---TGIRNRR-----------VLSGD-----ETLTSLAVEAA  104 (379)
T ss_pred             CCcEEEEEEEECCCceecHHHHHHhcCCchhheec--c---cCcceEe-----------ecCCC-----CCHHHHHHHHH
Confidence            468899999999987 5666665543211111100  0   0111110           00000     12467899999


Q ss_pred             HHHHHHcCCCCcccCcCCCCceE-EEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCCC-ccc
Q 024765          149 KKALVDAGITEQVSGELDKSRCG-VIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTG-PSY  226 (263)
Q Consensus       149 ~~Al~dAGl~~~~~~~~~~~r~g-v~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~  226 (263)
                      .+||+++|++++        ++. |++++..+.                        .. . ..+..|...+|+++ +++
T Consensus       105 ~~aL~~agi~~~--------dId~li~~s~~~~------------------------~~-~-~~a~~v~~~LG~~~~~~~  150 (379)
T PLN02326        105 KKALEMAGVDPE--------DVDLVLLCTSSPD------------------------DL-F-GSAPQVQAALGCTNALAF  150 (379)
T ss_pred             HHHHHHcCCCHH--------HCCEEEEEeCCCC------------------------cc-C-cHHHHHHHHhCCCCCcee
Confidence            999999998854        333 455543210                        00 1 13567999999976 678


Q ss_pred             cccccchHHHHHHHHHHHHHHhcccc-eEeeccCC
Q 024765          227 SISTACASSNYSILNATSHIIKGDTV-SNSPSSQA  260 (263)
Q Consensus       227 tv~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~  260 (263)
                      .|+.+|+|++.||++|.++|++|.++ ++|+|+|.
T Consensus       151 dv~~~Ca~~~~aL~~A~~~l~~g~~~~vLVv~~e~  185 (379)
T PLN02326        151 DLTAACSGFVLGLVTAARFIRGGGYKNVLVIGADA  185 (379)
T ss_pred             eccccchHHHHHHHHHHHHHHcCCCCEEEEEEech
Confidence            99999999999999999999999997 66788875

>PLN02644 acetyl-CoA C-acetyltransferase

Probab=98.65  E-value=1e-07  Score=87.85  Aligned_cols=87  Identities=17%  Similarity=0.164  Sum_probs=65.8

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+.+++.+||+|||++++.++       +|++|+....                      ..+  . ..+..++..+|
T Consensus        26 ~~L~~~a~~~al~dAgl~~~~ID-------~vv~g~~~~~----------------------~~~--~-~~~~~~~~~~G   73 (394)
T PLN02644         26 TELGSIAIQAALERAGVDPALVQ-------EVFFGNVLSA----------------------NLG--Q-APARQAALGAG   73 (394)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCcC----------------------CcC--C-cHHHHHHHhcC
Confidence            45789999999999999865433       6888864210                      001  1 13445888889


Q ss_pred             CCC--ccccccccchHHHHHHHHHHHHHHhcccceEee-ccC
Q 024765          221 WTG--PSYSISTACASSNYSILNATSHIIKGDTVSNSP-SSQ  259 (263)
Q Consensus       221 l~G--p~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~v~-Gae  259 (263)
                      +..  |+++|+++|+|++.||+.|+++|++|++|++++ |.|
T Consensus        74 l~~~~p~~~v~~~caSg~~av~~Aa~~I~sG~~d~vlv~G~E  115 (394)
T PLN02644         74 LPPSTICTTVNKVCASGMKAVMLAAQSIQLGINDVVVAGGME  115 (394)
T ss_pred             CCCCCceEEEeccchHHHHHHHHHHHHHHcCCCCEEEEEeEE
Confidence            863  788999999999999999999999999997654 444

>PRK07661 acetyl-CoA acetyltransferase; Provisional

Probab=98.64  E-value=1.2e-07  Score=87.34  Aligned_cols=88  Identities=22%  Similarity=0.188  Sum_probs=66.9

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+.+++.+||+++|+.++.++       .|++|+...+                        ......++..++..+|
T Consensus        28 ~eLa~~A~~~AL~~ag~~~~dID-------~vi~g~~~~~------------------------~~~g~~~a~~~~~~lG   76 (391)
T PRK07661         28 DDLGALVVKETLKRAGNYEGPID-------DLIIGCAMPE------------------------AEQGLNMARNIGALAG   76 (391)
T ss_pred             HHHHHHHHHHHHHhcCCChhHCC-------EEEEEecccc------------------------ccccchHHHHHHHHcC
Confidence            45789999999999987643322       5888865311                        0001233556889999


Q ss_pred             CCC--ccccccccchHHHHHHHHHHHHHHhcccceE-eeccC
Q 024765          221 WTG--PSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQ  259 (263)
Q Consensus       221 l~G--p~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae  259 (263)
                      +..  |.++|+++|+||+.||..|++.|++|++|++ |+|.|
T Consensus        77 l~~~~p~~~V~~aCaSG~~Al~~A~~~I~sG~~d~vLv~G~E  118 (391)
T PRK07661         77 LPYTVPAITINRYCSSGLQSIAYGAERIMLGHSEAVIAGGAE  118 (391)
T ss_pred             CCCCcceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEEEEe
Confidence            974  9999999999999999999999999999965 56666

>PLN03172 chalcone synthase family protein; Provisional

Probab=98.62  E-value=4.9e-07  Score=83.21  Aligned_cols=157  Identities=13%  Similarity=0.079  Sum_probs=99.5

Q ss_pred             CcEEEEecceeCCcC-CCHHHHHHHHH---cC--CCceee-CC-CCCCCCCCceeEEe----cCCCCCCCC------CCH
Q 024765           70 RRIVVTGLGAVTPLG-DDAHLFHTSLL---EG--VTGISD-IQ-GFDCSEFPTRIAAE----IKSLSTGGW------ISP  131 (263)
Q Consensus        70 ~~VaItG~g~~~p~g-~~~~~~w~~L~---~G--~~~i~~-~~-~~~~~~~~~~~~g~----i~~fd~~~~------i~~  131 (263)
                      .+..|.|+|...|.- ..-+++.+.+.   +.  ...++. +. -|+..+...++...    ++.+ +.+.      +..
T Consensus        15 ~~~~I~~igta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~-~~~~~~~~p~~~~   93 (393)
T PLN03172         15 GPATILAIGKATPANCVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKEN-PNMCAYMAPSLDA   93 (393)
T ss_pred             CCeEEEEEEecCCCccccHHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCceeEeccchhhhhC-ccccccCCCCHHH
Confidence            457899999999987 44455444443   22  122222 11 12223333333322    1111 1111      334


Q ss_pred             HHHhhcCHHHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHH
Q 024765          132 KIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMA  211 (263)
Q Consensus       132 ~~~~~~d~~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (263)
                      +......-...|+.+|+.+||+++|++++.++       .|+++++.+                     +    ..+ ..
T Consensus        94 r~~~~~~~a~~La~~Aa~~aL~~ag~~~~dId-------~ii~~t~t~---------------------~----~~P-~~  140 (393)
T PLN03172         94 RQDMVVVEVPKLGKEAAAKAIKEWGQPKSKIT-------HLVFCTTSG---------------------V----DMP-GA  140 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEccCC---------------------C----cCc-hH
Confidence            44555566778999999999999999854322       355565531                     0    122 46


Q ss_pred             HHHHHHHhCCCCc---cccccccchHHHHHHHHHHHHHHhcccc-eEeeccCC
Q 024765          212 SAVLAMDLGWTGP---SYSISTACASSNYSILNATSHIIKGDTV-SNSPSSQA  260 (263)
Q Consensus       212 a~~ia~~lgl~Gp---~~tv~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~  260 (263)
                      +.+|...||++.-   .+.++.+|++++.||..|.+++++|... ++|+++|-
T Consensus       141 a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E~  193 (393)
T PLN03172        141 DYQLTKLLGLKPSVKRFMMYQQGCFAGGTVLRLAKDLAENNAGSRVLVVCSEI  193 (393)
T ss_pred             HHHHHHHhCCCCCceEEeeeCCchHHHHHHHHHHHHHHHcCCCCeEEEEEEeh
Confidence            8899999999874   3577999999999999999999999874 77888874

>PLN03169 chalcone synthase family protein; Provisional

Probab=98.62  E-value=6.8e-07  Score=82.30  Aligned_cols=90  Identities=12%  Similarity=0.000  Sum_probs=68.3

Q ss_pred             CHHHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHH
Q 024765          138 DKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAM  217 (263)
Q Consensus       138 d~~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~  217 (263)
                      .....|+.+|+.+||+++|++++.++       .|+++++.                          .+.....+..|..
T Consensus       104 e~~~~La~~Aa~~aL~~ag~~~~dId-------~lI~~t~t--------------------------~~~~P~~a~~l~~  150 (391)
T PLN03169        104 EAVTQMAVEASLACIKEWGRPVSDIT-------HLVYVSSS--------------------------EARLPGGDLYLAK  150 (391)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCHHHCC-------EEEEECcC--------------------------CCCCCcHHHHHHH
Confidence            34567999999999999999854322       35555531                          1112244778999


Q ss_pred             HhCCCCc---cccccccchHHHHHHHHHHHHHHhcccc-eEeeccCC
Q 024765          218 DLGWTGP---SYSISTACASSNYSILNATSHIIKGDTV-SNSPSSQA  260 (263)
Q Consensus       218 ~lgl~Gp---~~tv~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~  260 (263)
                      .||++..   ++.+..+|+++++||..|..+|+.|... ++|+++|-
T Consensus       151 ~LGl~~~~~~~~d~~~gC~g~~~aL~~A~~~~~~~~~~~vLvv~~e~  197 (391)
T PLN03169        151 QLGLSPDVQRVMLYFLGCSGGVAGLRVAKDIAENNPGSRVLLTTSET  197 (391)
T ss_pred             HhCcCCcceeeecccChhHHHHHHHHHHHHHHHhCCCCeEEEEEEEc
Confidence            9999753   4889999999999999999999999874 77788875

>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=98.62  E-value=4.3e-07  Score=82.50  Aligned_cols=141  Identities=13%  Similarity=0.058  Sum_probs=92.8

Q ss_pred             CcEEEEecceeCCcC-CCHHHHHHHHHcCCCceeeCCC-CCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHH
Q 024765           70 RRIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQG-FDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVA  147 (263)
Q Consensus        70 ~~VaItG~g~~~p~g-~~~~~~w~~L~~G~~~i~~~~~-~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~a  147 (263)
                      +++-|+|+|...|.- .+.+++++.+... +... .++ ++..+...+.  ...         +     -.....|+.+|
T Consensus         6 ~~~~I~~~g~~lP~~~v~~~~~~~~~~~~-~~~~-~~~i~~~~Gi~~R~--~~~---------~-----~e~~~~la~~A   67 (353)
T PRK12880          6 DKAKISGICVSVPEHKICIDDELESVFSN-DIKT-LKRMKKVIGLNTRY--ICD---------E-----NTCVSDLGKHA   67 (353)
T ss_pred             cccEEEEEEEECCCeEecHHHHHHHhcCc-chhh-hhhhhhccCceEEE--eCC---------C-----CCCHHHHHHHH
Confidence            457899999999987 5655555554321 1100 000 0001111111  000         0     01246789999


Q ss_pred             HHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCCC--cc
Q 024765          148 GKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTG--PS  225 (263)
Q Consensus       148 a~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G--p~  225 (263)
                      +.+||+++|++++.++       .|++++...                         .......+.+|...||++.  ++
T Consensus        68 a~~aL~~a~~~~~dId-------~lI~~t~t~-------------------------d~~~P~~a~~v~~~Lg~~~~~~~  115 (353)
T PRK12880         68 ANTLLQGLNIDKNSLD-------ALIVVTQSP-------------------------DFFMPSTACYLHQLLNLSSKTIA  115 (353)
T ss_pred             HHHHHHHcCCCHHHCC-------EEEEEcCCC-------------------------CCCCCcHHHHHHHHhCCCCCceE
Confidence            9999999999864332       455666531                         1223456889999999963  68


Q ss_pred             ccccccchHHHHHHHHHHHHHHhcccceEeeccCC
Q 024765          226 YSISTACASSNYSILNATSHIIKGDTVSNSPSSQA  260 (263)
Q Consensus       226 ~tv~tACsSsl~Al~~A~~~Lr~G~~d~~v~Gae~  260 (263)
                      +-|+.+|+++++||..|..+|++|..+++|+++|-
T Consensus       116 ~di~~~C~g~~~aL~~A~~~i~~~~~~~LVv~~e~  150 (353)
T PRK12880        116 FDLGQACAGYLYGLFVAHSLIQSGLGKILLICGDT  150 (353)
T ss_pred             EehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEehh
Confidence            99999999999999999999999999977777773

>PRK06840 hypothetical protein; Validated

Probab=98.61  E-value=3.3e-07  Score=82.62  Aligned_cols=139  Identities=15%  Similarity=0.072  Sum_probs=87.7

Q ss_pred             CcEEEEecceeCCcC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHH
Q 024765           70 RRIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (263)
Q Consensus        70 ~~VaItG~g~~~p~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa  148 (263)
                      +.|-|+|+|...|.- .+.+++-+..-....-+.  ++   .++..+.   +        ..+     -.....|+.+++
T Consensus         3 ~~v~I~~~~~~lP~~~v~~~~l~~~~g~~~~~~~--~~---~Gi~~r~---~--------~~~-----~~~~~~la~~Aa   61 (339)
T PRK06840          3 MNVGIVGTGVYLPKDVMTAEEIAEKTGIPEEVVI--EK---FGIYEKP---V--------PGP-----EDHTSDMAIAAA   61 (339)
T ss_pred             CceEEEEEEEeCCCcccCHHHHHHHhCCCHHHHh--hh---cCcceEe---e--------CCC-----CCCHHHHHHHHH
Confidence            368999999999987 566665443211100000  00   0111110   0        000     112467899999


Q ss_pred             HHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCCC-cccc
Q 024765          149 KKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTG-PSYS  227 (263)
Q Consensus       149 ~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~t  227 (263)
                      .+||+++|++++.++       .+++.++..                        ........+.+|+..+|++. +++.
T Consensus        62 ~~aL~~ag~~~~dId-------~li~~~~~~------------------------~~~~~p~~a~~l~~~lGl~~~~~~~  110 (339)
T PRK06840         62 KPALKQAGVDPAAID-------VVIYIGSEH------------------------KDYPVWSSAPKIQHEIGAKNAWAFD  110 (339)
T ss_pred             HHHHHHcCCCHHHCC-------EEEEeccCC------------------------CCCCCCchHHHHHHHhCCCCccccc
Confidence            999999999864322       343333210                        01111123678999999975 7888


Q ss_pred             ccccchHHHHHHHHHHHHHHh-cccc-eEeeccCC
Q 024765          228 ISTACASSNYSILNATSHIIK-GDTV-SNSPSSQA  260 (263)
Q Consensus       228 v~tACsSsl~Al~~A~~~Lr~-G~~d-~~v~Gae~  260 (263)
                      |+.+|++++.||..|+++|++ |.++ ++|+|+|.
T Consensus       111 v~~~C~~~~~al~~A~~~l~~~g~~~~~Lvv~~~~  145 (339)
T PRK06840        111 IMAVCASFPIALKVAKDLLYSDPSIENVLLVGGYR  145 (339)
T ss_pred             ccccchHHHHHHHHHHHHHhcCCCccEEEEEeecc
Confidence            999999999999999999999 8997 56788764

>TIGR02430 pcaF beta-ketoadipyl CoA thiolase

Probab=98.61  E-value=1.7e-07  Score=86.45  Aligned_cols=89  Identities=19%  Similarity=0.109  Sum_probs=68.6

Q ss_pred             HHHHHHHHHHHHH-HcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 024765          141 LIYALVAGKKALV-DAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (263)
Q Consensus       141 ~~l~l~aa~~Al~-dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l  219 (263)
                      ..|+.++..++|+ ++|++++.++       .|++|+...                        .+.....++..++...
T Consensus        26 ~~L~~~a~~~al~~~a~i~~~~Id-------~v~~G~~~~------------------------~~~~~~~~ar~~~~~~   74 (400)
T TIGR02430        26 DDLAAVPIKALLARNPQLDWAAID-------DVIYGCANQ------------------------AGEDNRNVARMAALLA   74 (400)
T ss_pred             HHHHHHHHHHHHHhccCCCHHHCC-------EEEEEeccc------------------------cccccccHHHHHHHHc
Confidence            4578889999999 6899875444       589987531                        0111134566799999


Q ss_pred             CCC--CccccccccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          220 GWT--GPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       220 gl~--Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      |+.  =|+++|+++|+||+.||+.|+++|++|++|++ ++|.|.
T Consensus        75 Gl~~~~p~~~V~~~CaSG~~Ai~~a~~~I~sG~~d~~la~G~E~  118 (400)
T TIGR02430        75 GLPVSVPGTTVNRLCGSGLDAIGMAARAIKAGEADLLIAGGVES  118 (400)
T ss_pred             CCCCCCceEEeechhhhHHHHHHHHHHHHHCCCCCEEEEecccc
Confidence            996  49999999999999999999999999999976 556553

Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.

>TIGR02845 spore_V_AD stage V sporulation protein AD

Probab=98.60  E-value=2.2e-07  Score=82.12  Aligned_cols=82  Identities=18%  Similarity=0.146  Sum_probs=64.1

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+.+|+.+||++||++++.++       .+|+|...                          .  ....++.++..+|
T Consensus        51 ~eLa~eAa~~ALekAGL~~~DID-------~IIvGdl~--------------------------~--Q~~~As~vA~~LG   95 (327)
T TIGR02845        51 RKLMEDAVNLALKKANLKKDDVD-------FFLAGDLL--------------------------N--QIITANFVARDLG   95 (327)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEeCCC--------------------------C--cccHHHHHHHHhC
Confidence            56899999999999999865433       45665310                          0  1135778999998


Q ss_pred             CCCccccccccchHHHHHHHHHHHHHHhcccceE-eeccC
Q 024765          221 WTGPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQ  259 (263)
Q Consensus       221 l~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae  259 (263)
                      +  |.+.|.+||+|+..||..|+.+|+.|.+|.+ |+|+|
T Consensus        96 I--P~fdV~~ACSTf~~AL~lAa~lI~SG~ad~VLVV~Ss  133 (327)
T TIGR02845        96 I--PFLGLYGACSTSMETLALGAMLVDGGFADRVLAATSS  133 (327)
T ss_pred             C--CEEEEeccCHHHHHHHHHHHHHHhCCCCCEEEEEEec
Confidence            7  8899999999999999999999999999854 55543

Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.

>PRK05790 putative acyltransferase; Provisional

Probab=98.60  E-value=1.9e-07  Score=85.96  Aligned_cols=88  Identities=20%  Similarity=0.265  Sum_probs=66.1

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+.+++.+||+|||++++.++       +|++|+....                        +. ....+..+...+|
T Consensus        27 ~~La~~A~~~AL~dAgl~~~dID-------~vi~g~~~~~------------------------~~-~~~~~~~~~~~~g   74 (393)
T PRK05790         27 VELGAIVIKAALERAGVPPEQVD-------EVIMGQVLQA------------------------GA-GQNPARQAALKAG   74 (393)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------eEEEEEecCC------------------------CC-CCcHHHHHHHHcC
Confidence            56889999999999999876533       6888875310                        00 0112333556678


Q ss_pred             CC--CccccccccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          221 WT--GPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       221 l~--Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      +.  -|+++|+++|+|++.||..|+++|++|.+|.+ |+|+|.
T Consensus        75 l~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~  117 (393)
T PRK05790         75 LPVEVPALTINKVCGSGLKAVALAAQAIRAGDADIVVAGGQES  117 (393)
T ss_pred             CCCCCceeeecccchHHHHHHHHHHHHHHcCCCCEEEEEeeec
Confidence            75  48999999999999999999999999999966 466664

>PRK07516 acetyl-CoA acetyltransferase; Provisional

Probab=98.60  E-value=2e-07  Score=85.72  Aligned_cols=90  Identities=22%  Similarity=0.332  Sum_probs=63.6

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+.+++++||+|||++++.++       +|++|+..+...                     ......  +..+...++
T Consensus        23 ~eL~~eA~~~AL~dAgl~~~dId-------~vi~g~~~~~~~---------------------~~~~~~--~~~~~~~~g   72 (389)
T PRK07516         23 ESLIVRVAREALAHAGIAAGDVD-------GIFLGHFNAGFS---------------------PQDFPA--SLVLQADPA   72 (389)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEEecCCcc---------------------ccccch--hHHHHHhcC
Confidence            46889999999999999865433       788887532110                     000001  112233446


Q ss_pred             CC-CccccccccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          221 WT-GPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       221 l~-Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      ++ .|+++|+++|+|++.||+.|+++|++|++|.+ |+|+|.
T Consensus        73 l~~~p~~~v~~~CaSg~~Al~~A~~~I~sG~~d~vLvvg~e~  114 (389)
T PRK07516         73 LRFKPATRVENACATGSAAVYAALDAIEAGRARIVLVVGAEK  114 (389)
T ss_pred             CCCCceeeeccccHHHHHHHHHHHHHHHCCCCCEEEEEEehh
Confidence            54 48899999999999999999999999999966 467664

>PLN03168 chalcone synthase; Provisional

Probab=98.59  E-value=5.7e-07  Score=82.69  Aligned_cols=158  Identities=15%  Similarity=0.085  Sum_probs=99.3

Q ss_pred             CcEEEEecceeCCcC-CCHHHHHHHHHcC-----CCceee-CC-CCCCCCCCceeEEecCC-C--CCCC----C--CCHH
Q 024765           70 RRIVVTGLGAVTPLG-DDAHLFHTSLLEG-----VTGISD-IQ-GFDCSEFPTRIAAEIKS-L--STGG----W--ISPK  132 (263)
Q Consensus        70 ~~VaItG~g~~~p~g-~~~~~~w~~L~~G-----~~~i~~-~~-~~~~~~~~~~~~g~i~~-f--d~~~----~--i~~~  132 (263)
                      .+..|.|+|...|.- ..-+++++.+..-     ....+. +. -++..+...++....++ +  .+.+    .  +..+
T Consensus        14 ~~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~ps~~~r   93 (389)
T PLN03168         14 GPACVLGIGTAVPPAEFLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRKRHMFLTEEVLKANPGICTYMEPSLNVR   93 (389)
T ss_pred             CCeEEEEEeccCCCcccCHHHHHHHHHHhccccCcHHHHHHHHHHHHhcCCCeeeeeccccchhhCcccccccCCCHHHH
Confidence            457799999999987 3444454444321     111111 11 11222222222211110 0  0111    1  2334


Q ss_pred             HHhhcCHHHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHH
Q 024765          133 IAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMAS  212 (263)
Q Consensus       133 ~~~~~d~~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  212 (263)
                      ......-...|+.+|+.+||+++|+++++++       .|+++++++                     +    .+ ...+
T Consensus        94 ~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId-------~lI~~T~Tg---------------------~----~~-Ps~a  140 (389)
T PLN03168         94 HDIVVVQVPKLAAEAAQKAIKEWGGRKSDIT-------HIVFATTSG---------------------V----NM-PGAD  140 (389)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEECCCC---------------------C----CC-ccHH
Confidence            4445556678999999999999999864433       466666532                     1    12 2358


Q ss_pred             HHHHHHhCCCCc---cccccccchHHHHHHHHHHHHHHhccc-ceEeeccCC
Q 024765          213 AVLAMDLGWTGP---SYSISTACASSNYSILNATSHIIKGDT-VSNSPSSQA  260 (263)
Q Consensus       213 ~~ia~~lgl~Gp---~~tv~tACsSsl~Al~~A~~~Lr~G~~-d~~v~Gae~  260 (263)
                      .+|+..||++.-   ++.+..+|+++++||..|.++|++|.. .++|+|+|-
T Consensus       141 ~~l~~~LGl~~~~~r~~d~~~gC~g~~~aL~~A~~~i~~~~~~~VLVV~~E~  192 (389)
T PLN03168        141 HALAKLLGLKPTVKRVMMYQTGCFGGASVLRVAKDLAENNKGARVLAVASEV  192 (389)
T ss_pred             HHHHHHhCcCCcceeeeeeCCccHHHHHHHHHHHHHHHhCCCCEEEEEEEeh
Confidence            899999999863   699999999999999999999999988 477889885

>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=98.58  E-value=7.2e-07  Score=79.99  Aligned_cols=135  Identities=20%  Similarity=0.252  Sum_probs=89.0

Q ss_pred             cEEEEecceeCCcC-CCHHHHHHHHHcCCCceeeCCCCCC--CCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHH
Q 024765           71 RIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDC--SEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVA  147 (263)
Q Consensus        71 ~VaItG~g~~~p~g-~~~~~~w~~L~~G~~~i~~~~~~~~--~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~a  147 (263)
                      .|.|+|+|...|.- .+.+++-+.+  |.+     +.|-.  .+...+.   +        ..+.     .....|+..|
T Consensus         3 ~~~I~~~g~~lP~~~v~~~~~~~~~--~~~-----~~~i~~~~Gi~~r~---~--------~~~~-----e~~~~la~~A   59 (326)
T PRK05963          3 SSRIAGFGHAVPDRRVENAEIEAQL--GLE-----TGWIERRTGIRCRR---W--------AAPD-----ETLSDLAASA   59 (326)
T ss_pred             ccEEEEEEEECCCCeecHHHHHHHc--CCC-----HHHhhhccCCeEEE---E--------cCCC-----CCHHHHHHHH
Confidence            57899999999987 5666665543  111     11100  0111111   0        0000     1136789999


Q ss_pred             HHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCCC-ccc
Q 024765          148 GKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTG-PSY  226 (263)
Q Consensus       148 a~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~  226 (263)
                      +.+||+++|++++.++       -|+++++..                         .......+.+|+..||++. +++
T Consensus        60 a~~aL~~ag~~~~~Id-------~li~~t~~~-------------------------d~~~p~~a~~v~~~Lg~~~~~~~  107 (326)
T PRK05963         60 GDMALSDAGIERSDIA-------LTLLATSTP-------------------------DHLLPPSAPLLAHRLGLQNSGAI  107 (326)
T ss_pred             HHHHHHHcCCCHHHCC-------EEEEECCCC-------------------------CCCCCcHHHHHHHHhCCCCCcee
Confidence            9999999999864322       455666431                         1111234678999999955 889


Q ss_pred             cccccchHHHHHHHHHHHHHHhcccceEeeccCC
Q 024765          227 SISTACASSNYSILNATSHIIKGDTVSNSPSSQA  260 (263)
Q Consensus       227 tv~tACsSsl~Al~~A~~~Lr~G~~d~~v~Gae~  260 (263)
                      .|..+|++++.||..|..+|+.|.-.++|+++|.
T Consensus       108 di~~~C~g~~~aL~~A~~~l~~~~~~aLVv~~d~  141 (326)
T PRK05963        108 DLAGACAGFLYALVLADGFVRAQGKPVLVVAANI  141 (326)
T ss_pred             eccchhhHHHHHHHHHHHHHHcCCCeEEEEEech
Confidence            9999999999999999999999865577888773

>PRK07801 acetyl-CoA acetyltransferase; Provisional

Probab=98.58  E-value=2e-07  Score=85.53  Aligned_cols=88  Identities=17%  Similarity=0.123  Sum_probs=61.7

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+.+++.+||+|||++++.++       +|++|+....                       ... ...++..+....|
T Consensus        27 ~~L~~~a~~~al~dagl~~~~ID-------~vv~g~~~~~-----------------------~~~-~~~~~~~~~l~~g   75 (382)
T PRK07801         27 ADLGAHVLKGLVDRTGIDPAAVD-------DVIFGCVDTI-----------------------GPQ-AGNIARTSWLAAG   75 (382)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHcC-------EEEEEeeccC-----------------------Ccc-cccHHHHHHHHcC
Confidence            45789999999999999875433       7888753100                       000 0112222223344


Q ss_pred             C--CCccccccccchHHHHHHHHHHHHHHhcccceEee-ccC
Q 024765          221 W--TGPSYSISTACASSNYSILNATSHIIKGDTVSNSP-SSQ  259 (263)
Q Consensus       221 l--~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~v~-Gae  259 (263)
                      +  ..|.++|+++|+||+.||+.|+++|++|++|++|+ |.|
T Consensus        76 l~~~~p~~~v~~acaSg~~Av~~Aa~~I~sG~~d~vLv~G~e  117 (382)
T PRK07801         76 LPEEVPGVTVDRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQ  117 (382)
T ss_pred             CCCCCceeeecchhhhHHHHHHHHHHHHHCCCCCEEEEcchh
Confidence            4  46899999999999999999999999999997655 444

>PRK08313 acetyl-CoA acetyltransferase; Provisional

Probab=98.56  E-value=1.9e-07  Score=85.77  Aligned_cols=89  Identities=26%  Similarity=0.216  Sum_probs=67.1

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+.+++.+||+|||+++++++       ++++++. .+                     .+.+.  ..++..|+..+|
T Consensus        25 ~eL~~eAa~~Al~dAgl~~~dID-------~iv~~~~-~~---------------------~~~~~--~~~~~~va~~LG   73 (386)
T PRK08313         25 AGLVREAIDRALADAGLTWDDID-------AVVVGKA-PD---------------------FFEGV--MMPELFLADALG   73 (386)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEecc-cc---------------------ccccc--cCchHHHHHhcC
Confidence            45789999999999999865433       6777652 10                     00110  112357999999


Q ss_pred             CCC-ccccccccchHHHHHHHHHHHHHHhcccce-EeeccCC
Q 024765          221 WTG-PSYSISTACASSNYSILNATSHIIKGDTVS-NSPSSQA  260 (263)
Q Consensus       221 l~G-p~~tv~tACsSsl~Al~~A~~~Lr~G~~d~-~v~Gae~  260 (263)
                      +++ |++.|+++|+|+..+++.|++.|++|++|. +|+|+|.
T Consensus        74 l~~~~~~~v~~~casg~~al~~A~~~I~sG~~~~vLVvg~e~  115 (386)
T PRK08313         74 ATGKPLIRVHTAGSVGGSTAVVAASLVQSGVYRRVLAVAWEK  115 (386)
T ss_pred             CCCCceEEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEEE
Confidence            976 889999999999999999999999999995 4678773

>PRK06445 acetyl-CoA acetyltransferase; Provisional

Probab=98.54  E-value=2.4e-07  Score=85.33  Aligned_cols=90  Identities=16%  Similarity=0.167  Sum_probs=63.1

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+.+++.+||+|+|++++.++       .|++|+......                     .... ......+...++
T Consensus        33 ~~L~~~a~~~AL~~agl~~~dID-------~vi~g~~~~~~~---------------------~~~~-~~~~~~l~a~~~   83 (394)
T PRK06445         33 EELAAMLINRLIEKTGIKPEEID-------DIITGCALQVGE---------------------NWLY-GGRHPIFLARLP   83 (394)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------eeEEEeecCCCc---------------------cccc-HHHHHHHHcCCC
Confidence            45789999999999999876543       688887542110                     0000 011112333334


Q ss_pred             CCCccccccccchHHHHHHHHHHHHHHhcccceE-eeccC
Q 024765          221 WTGPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQ  259 (263)
Q Consensus       221 l~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae  259 (263)
                      .+-|+++|+++|+|++.||+.|+++|++|.+|++ |+|.|
T Consensus        84 ~~~p~~~V~~~CaSg~~ai~~A~~~I~sG~~d~vLv~G~e  123 (394)
T PRK06445         84 YNIPAMAVDRQCASSLTTVSIGAMEIATGMADIVIAGGVE  123 (394)
T ss_pred             CCCcchhhhhhhHHHHHHHHHHHHHHHcCCCCEEEEeeec
Confidence            4569999999999999999999999999999966 55555

>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes

Probab=98.54  E-value=3e-07  Score=82.08  Aligned_cols=134  Identities=19%  Similarity=0.158  Sum_probs=89.7

Q ss_pred             EEEEecceeCCcC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHHHH
Q 024765           72 IVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGKK  150 (263)
Q Consensus        72 VaItG~g~~~p~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa~~  150 (263)
                      |-|+++|...|.- .+.+++.+.+..  +.+...     .+...+.      |-    . +     -.....|+.+++.+
T Consensus         2 v~I~~i~~~lP~~~v~~~~~~~~~~~--~~~~~~-----~gi~~r~------~~----~-~-----~~~~~~l~~~a~~~   58 (324)
T cd00827           2 VGIEAIGAYLPRYRVDNEELAEGLGV--DPGKYT-----TGIGQRH------MA----G-D-----DEDVPTMAVEAARR   58 (324)
T ss_pred             ccEEEEEecCCceeecHHHHHHHhCC--Ccceee-----eecceeE------ec----C-C-----CCCHHHHHHHHHHH
Confidence            6799999999987 677777665421  100000     0000000      10    0 0     11236789999999


Q ss_pred             HHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCC-CCcccccc
Q 024765          151 ALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGW-TGPSYSIS  229 (263)
Q Consensus       151 Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl-~Gp~~tv~  229 (263)
                      ||+++|++++.++       .|++|+....                        .. ....+.+|+..+|+ ..|++.|+
T Consensus        59 aL~~ag~~~~~Id-------~li~~~~~~~------------------------~~-~~~~~~~i~~~lg~~~~~~~~v~  106 (324)
T cd00827          59 ALERAGIDPDDIG-------LLIVATESPI------------------------DK-GKSAATYLAELLGLTNAEAFDLK  106 (324)
T ss_pred             HHHHcCCCHHHCC-------EEEEEcCCCC------------------------CC-CccHHHHHHHHcCCCCCceeehh
Confidence            9999999864433       5677765310                        00 22456889999999 56899999


Q ss_pred             ccchHHHHHHHHHHHHHHhcccc-eEeeccCC
Q 024765          230 TACASSNYSILNATSHIIKGDTV-SNSPSSQA  260 (263)
Q Consensus       230 tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~  260 (263)
                      .+|+|++.||..|+++|++|.++ ++|+|+|.
T Consensus       107 ~~C~s~~~al~~A~~~i~~g~~~~vlvv~~e~  138 (324)
T cd00827         107 QACYGGTAALQLAANLVESGPWRYALVVASDI  138 (324)
T ss_pred             hhhHHHHHHHHHHHHHHHcCCCCEEEEEEEHH
Confidence            99999999999999999999998 45677764

They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.

>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine

Probab=98.54  E-value=3.7e-07  Score=84.08  Aligned_cols=90  Identities=19%  Similarity=0.147  Sum_probs=65.9

Q ss_pred             HHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 024765          140 YLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (263)
Q Consensus       140 ~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l  219 (263)
                      ...++..++.+||+++|++++.++       .|++|+.....                      .+  .+.....+...+
T Consensus        23 ~~el~~~a~~~Al~~agl~p~dID-------~vi~g~~~~~~----------------------~g--~~~~~~~~~~~l   71 (393)
T cd00826          23 AHEAGAKAIAAALEPAGVAAGAVE-------EACLGQVLGAG----------------------EG--QNCAQQAAMHAG   71 (393)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEEccCCc----------------------cc--CcHHHHHHHHcC
Confidence            356788899999999999875433       57888753211                      01  111111256677


Q ss_pred             CCCC-ccccccccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          220 GWTG-PSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       220 gl~G-p~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      ++.+ |+++|+++|+|++.||+.|+++|++|++|++ |+|.|.
T Consensus        72 g~~~~p~~~V~~~Casg~~al~~A~~~I~sG~~~~vlv~g~e~  114 (393)
T cd00826          72 GLQEAPAIGMNNLCGSGLRALALAMQLIAGGDANCILAGGFEK  114 (393)
T ss_pred             CCCCCcEEEecchhHHHHHHHHHHHHHHHCCCCCEEEEEeeec
Confidence            8766 9999999999999999999999999999965 556564

There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.

>PRK08304 stage V sporulation protein AD; Validated

Probab=98.53  E-value=4.2e-07  Score=80.52  Aligned_cols=82  Identities=18%  Similarity=0.141  Sum_probs=63.9

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+.+|+.+||++||+++++++       .+|+|...                          +  ....++.++..+|
T Consensus        57 seLa~eAa~~ALekAGI~~~DID-------~lI~Gdll--------------------------~--Q~~sAs~vA~~LG  101 (337)
T PRK08304         57 RKMMEDAIQQALQKANLKKSDID-------YLLAGDLL--------------------------N--QIISANFAARELG  101 (337)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEECCC--------------------------C--CcchHHHHHHHhC
Confidence            57899999999999999865433       45665321                          1  1134677888888


Q ss_pred             CCCccccccccchHHHHHHHHHHHHHHhcccceE-eeccC
Q 024765          221 WTGPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQ  259 (263)
Q Consensus       221 l~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae  259 (263)
                      +  |.+-|.+||+|+..||.+|+.+|+.|.+|.+ |+++|
T Consensus       102 I--Pa~dV~gACST~~~AL~lAa~lI~SG~ad~VLVV~Ss  139 (337)
T PRK08304        102 I--PFLGLYGACSTMMESLALGSMLIDGGFADRVLAATSS  139 (337)
T ss_pred             C--cEEEEeccCHHHHHHHHHHHHHHhcCCCCEEEEEEcc
Confidence            6  9999999999999999999999999999955 45554

>PRK06365 acetyl-CoA acetyltransferase; Provisional

Probab=98.53  E-value=3.1e-07  Score=85.47  Aligned_cols=89  Identities=18%  Similarity=0.076  Sum_probs=65.7

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+.+++.+||+|||++++.++       +|++|....                      .+.+  .+.....++..+|
T Consensus        38 ~eL~~eA~~~Al~dagl~~~dID-------~vv~~~~~~----------------------~~~g--~~~~~~~~~~~lG   86 (430)
T PRK06365         38 RERVKKAFDYAMNDAGLTLADID-------GSVASYFSD----------------------HFQR--QLLAGIMVQDYLG   86 (430)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHcC-------EEEEecccc----------------------cccc--cchhhHHHHHhcC
Confidence            35789999999999999865433       566654210                      0011  1222334688999


Q ss_pred             CCC-ccccccccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          221 WTG-PSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       221 l~G-p~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      +.+ |+++|+++|+|+..||..|++.|++|++|+| |+|+|.
T Consensus        87 l~~~~~~~v~~~~aSg~~ai~~A~~~I~sG~~~~vLv~G~e~  128 (430)
T PRK06365         87 LVPKPSKRIEGGGATGGLAFQAGYEEIASGRMDCVAVYGFET  128 (430)
T ss_pred             CCCCceEEEeCCcHHHHHHHHHHHHHHHcCCCCEEEEEEeee
Confidence            987 8899999999999999999999999999965 566663

>PLN03170 chalcone synthase; Provisional

Probab=98.52  E-value=1.2e-06  Score=80.82  Aligned_cols=158  Identities=13%  Similarity=0.079  Sum_probs=100.2

Q ss_pred             CcEEEEecceeCCcC-CCHHHHHHHHHc-----CCCceee-CC-CCCCCCCCceeEEecCC---CCCCCC------CCHH
Q 024765           70 RRIVVTGLGAVTPLG-DDAHLFHTSLLE-----GVTGISD-IQ-GFDCSEFPTRIAAEIKS---LSTGGW------ISPK  132 (263)
Q Consensus        70 ~~VaItG~g~~~p~g-~~~~~~w~~L~~-----G~~~i~~-~~-~~~~~~~~~~~~g~i~~---fd~~~~------i~~~  132 (263)
                      .+..|.|+|...|.- ..-+++++.+..     .....++ +. -|+..+...++....++   .++.++      +..+
T Consensus        19 ~~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r   98 (401)
T PLN03170         19 GPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLDAR   98 (401)
T ss_pred             CCeEEEEEeecCCCccccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccCCCCHHHH
Confidence            347799999999987 455555555543     1111221 11 12333333333322111   111111      3344


Q ss_pred             HHhhcCHHHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHH
Q 024765          133 IAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMAS  212 (263)
Q Consensus       133 ~~~~~d~~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  212 (263)
                      ......-.-.|+.+|+.+||+++|+++++++       .|++.++.+                     +    . ...++
T Consensus        99 ~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId-------~lI~~T~Tg---------------------~----~-~Ps~a  145 (401)
T PLN03170         99 QDIVVVEVPKLGKAAAQKAIKEWGQPKSKIT-------HLVFCTTSG---------------------V----D-MPGAD  145 (401)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEccCC---------------------C----C-CChHH
Confidence            4455555667999999999999999854322       355555421                     0    1 22468


Q ss_pred             HHHHHHhCCCCc---cccccccchHHHHHHHHHHHHHHhcccc-eEeeccCC
Q 024765          213 AVLAMDLGWTGP---SYSISTACASSNYSILNATSHIIKGDTV-SNSPSSQA  260 (263)
Q Consensus       213 ~~ia~~lgl~Gp---~~tv~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~  260 (263)
                      .+|...||++.-   .+.+..+|++++.||..|.+.|++|... ++|+++|-
T Consensus       146 ~~l~~~LGl~~~~~r~~d~~~gC~G~~~aL~~A~~l~~~~~~~~vLVV~~E~  197 (401)
T PLN03170        146 YQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEI  197 (401)
T ss_pred             HHHHHHhCcCcccHHHHhhcChhHHHHHHHHHHHHHHHcCCCCeEEEEEEeh
Confidence            899999999875   5899999999999999999999999874 67788874

>PRK06065 acetyl-CoA acetyltransferase; Provisional

Probab=98.52  E-value=3.4e-07  Score=84.22  Aligned_cols=89  Identities=21%  Similarity=0.160  Sum_probs=67.4

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+.+++++||+|||+++++++       ++++|+...                      .+.+  ....+..++..+|
T Consensus        30 ~~L~~~A~~~Al~dagl~~~dID-------~~i~~~~~~----------------------~~~~--~~~~a~~l~~~lG   78 (392)
T PRK06065         30 QELAWEAASKALDEAGLELKDID-------CVVIGSAPD----------------------AFDG--VHMKGEYLSHGSG   78 (392)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEeccCC----------------------cccc--cccHHHHHHHHcC
Confidence            45889999999999999865433       677764210                      0011  1234556888898


Q ss_pred             CC-CccccccccchHHHHHHHHHHHHHHhcccceEe-eccCC
Q 024765          221 WT-GPSYSISTACASSNYSILNATSHIIKGDTVSNS-PSSQA  260 (263)
Q Consensus       221 l~-Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~v-~Gae~  260 (263)
                      +. .|.+.|+++|+|+..||..|+.+|++|.+|.++ +|+|-
T Consensus        79 ~~~~~~~~V~~~gasG~~al~~A~~~I~sG~ad~vLVvg~e~  120 (392)
T PRK06065         79 GIRKPVSRVYVGGATGVMTAIAGWYHVASGLCQKVLAVAEEK  120 (392)
T ss_pred             CCCCCeEEEecCchhHHHHHHHHHHHHhCCCCCEEEEEEeec
Confidence            86 599999999999999999999999999999664 67763

>PRK06289 acetyl-CoA acetyltransferase; Provisional

Probab=98.50  E-value=3.5e-07  Score=84.56  Aligned_cols=91  Identities=21%  Similarity=0.177  Sum_probs=62.4

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+.+++.+||+|||++++.++       +|++|+..++..                .   -........ .  ....+
T Consensus        27 ~eLa~eA~~~AL~dAgl~~~dID-------~vi~g~~~~~~~----------------~---~~~~~~~~~-~--~~~~~   77 (403)
T PRK06289         27 ADLTREVVDGTLAAAGVDADDIE-------VVHVGNFFGELF----------------A---GQGHLGAMP-A--TVHPA   77 (403)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecccccc----------------c---cccccchHH-H--HHhhc
Confidence            56889999999999999876544       788887532110                0   000001111 1  12234


Q ss_pred             CCC-ccccccccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          221 WTG-PSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       221 l~G-p~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      +.| |+++|+++|+|++.||+.|+.+|++|++|.+ |+|+|.
T Consensus        78 ~~g~~~~~v~~~Casg~~al~~Aa~~I~sG~~~~VLvvg~e~  119 (403)
T PRK06289         78 LWGVPASRHEAACASGSVATLAAMADLRAGRYDVALVVGVEL  119 (403)
T ss_pred             CCCCceeecccccHHHHHHHHHHHHHHHcCCCCEEEEEEEEe
Confidence            434 8999999999999999999999999999955 566664

>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs

Probab=98.46  E-value=1.9e-06  Score=78.46  Aligned_cols=154  Identities=13%  Similarity=0.124  Sum_probs=95.5

Q ss_pred             EEEEecceeCCcC-CCHHHHHHHHHcCCCc---------eeeCCCCCCCCCCceeEEec--CC-CCCC----CCCCHHHH
Q 024765           72 IVVTGLGAVTPLG-DDAHLFHTSLLEGVTG---------ISDIQGFDCSEFPTRIAAEI--KS-LSTG----GWISPKIA  134 (263)
Q Consensus        72 VaItG~g~~~p~g-~~~~~~w~~L~~G~~~---------i~~~~~~~~~~~~~~~~g~i--~~-fd~~----~~i~~~~~  134 (263)
                      +.|+|+|...|.- .+-+++++.+......         +..+  +...+...+.-..-  ++ +++.    .-+..+..
T Consensus         2 ~~I~~~~~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~gI~~R~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (361)
T cd00831           2 ATILAIGTAVPPHRVPQSELVDFYRRLFSSDHLPELKEKLKRL--CAKTGIETRYLVLPGGEETYAPRPEMSPSLDERND   79 (361)
T ss_pred             cEEEEEEEeCCCCcCCHHHhhHHHHhcCChhhhHHHHHHHHHH--HhhcceeEEEEEecCchhhcCCccccCCCcCcchh
Confidence            5799999999988 6777777776532211         0111  00011111111000  00 1110    00222333


Q ss_pred             hhcCHHHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHH
Q 024765          135 KKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAV  214 (263)
Q Consensus       135 ~~~d~~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  214 (263)
                      ....-...|+.+++.+||+++|++++.++       .|+++++.+                          ......+.+
T Consensus        80 ~~~~~~~~la~~Aa~~aL~~a~~~~~~Id-------~li~~s~~~--------------------------~~~P~~a~~  126 (361)
T cd00831          80 IALEEARELAEEAARGALDEAGLRPSDID-------HLVVNTSTG--------------------------NPTPSLDAM  126 (361)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCCCHHHCC-------EEEEECCCC--------------------------CCCCCHHHH
Confidence            33445678999999999999999854322       345554421                          112345778


Q ss_pred             HHHHhCCCC--cccccc-ccchHHHHHHHHHHHHHHhcccc-eEeeccCC
Q 024765          215 LAMDLGWTG--PSYSIS-TACASSNYSILNATSHIIKGDTV-SNSPSSQA  260 (263)
Q Consensus       215 ia~~lgl~G--p~~tv~-tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~  260 (263)
                      |...+|++.  +++.|. .+|++++.||+.|..+|+.|..+ ++|+++|.
T Consensus       127 i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~~~~~~~~~~~aLvv~~e~  176 (361)
T cd00831         127 LINRLGLRPDVKRYNLGGMGCSAGAIALDLAKDLLEANPGARVLVVSTEL  176 (361)
T ss_pred             HHHHhCCCcccchhccccccchhHHHHHHHHHHHHHHCCCCEEEEEEeec
Confidence            999999974  678898 89999999999999999999986 66788874

PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.

>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed

Probab=98.46  E-value=8.7e-07  Score=81.46  Aligned_cols=88  Identities=15%  Similarity=0.130  Sum_probs=65.3

Q ss_pred             HHHHHHHHHHHHH-HcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 024765          141 LIYALVAGKKALV-DAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (263)
Q Consensus       141 ~~l~l~aa~~Al~-dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l  219 (263)
                      ..|...++++||+ ++|++++.++       .|++|+...                        .......++..++...
T Consensus        28 ~~L~~~~~~~al~~~agl~~~~Id-------~vi~g~~~~------------------------~~~~g~~~ar~~~~~~   76 (387)
T PRK08947         28 EDLSAHLMRSLLARNPALDPAEID-------DIIWGCVQQ------------------------TLEQGFNIARNAALLA   76 (387)
T ss_pred             HHHHHHHHHHHHHhccCcChHHhC-------eEEEEeccc------------------------cccccccHHHHHHHHc
Confidence            4577888999999 5899865433       688886420                        0000122355678888


Q ss_pred             CCCC--ccccccccchHHHHHHHHHHHHHHhcccceEe-eccC
Q 024765          220 GWTG--PSYSISTACASSNYSILNATSHIIKGDTVSNS-PSSQ  259 (263)
Q Consensus       220 gl~G--p~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~v-~Gae  259 (263)
                      |+..  |+++|+++|+||+.|+..|+++|++|++|+++ +|.|
T Consensus        77 Gl~~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~d~vlv~G~E  119 (387)
T PRK08947         77 GIPHSVPAVTVNRLCGSSMQALHDAARAIMTGDGDVFLIGGVE  119 (387)
T ss_pred             CCCCCCcceeeechhHHHHHHHHHHHHHHHCCCCCEEEEcccc
Confidence            9864  77999999999999999999999999999765 5555

>PLN03173 chalcone synthase; Provisional

Probab=98.45  E-value=3e-06  Score=77.95  Aligned_cols=158  Identities=12%  Similarity=0.082  Sum_probs=98.1

Q ss_pred             CcEEEEecceeCCcC-CCHHHHHHHHHc-----CCCceee-CCC-CCCCCCCceeEEecCC-CC--CCCC------CCHH
Q 024765           70 RRIVVTGLGAVTPLG-DDAHLFHTSLLE-----GVTGISD-IQG-FDCSEFPTRIAAEIKS-LS--TGGW------ISPK  132 (263)
Q Consensus        70 ~~VaItG~g~~~p~g-~~~~~~w~~L~~-----G~~~i~~-~~~-~~~~~~~~~~~g~i~~-fd--~~~~------i~~~  132 (263)
                      .+..|.|+|..+|.- ..-+++++.+..     +....+. +.+ |+..+...++-...++ ++  +.++      +..+
T Consensus        15 ~~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r   94 (391)
T PLN03173         15 GPATIMAIGTSTPPNCVDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVCEYMAPSLDAR   94 (391)
T ss_pred             CCeEEEEEEccCCCcccCHHHHHHHHHHHhccccchhHHHHHHHHHHhCCCCeeeEeccchhhhhCcccccccCCCHHHH
Confidence            347799999999987 444555554432     2222222 211 2223333333222111 10  1111      2233


Q ss_pred             HHhhcCHHHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHH
Q 024765          133 IAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMAS  212 (263)
Q Consensus       133 ~~~~~d~~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  212 (263)
                      ......-...|+.+|+.+||+++|+++++++       -|++.++.+                     +    .. ...+
T Consensus        95 ~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId-------~li~~t~t~---------------------~----~~-P~~a  141 (391)
T PLN03173         95 QDMVVVEVPKLGKEAAAKAIKEWGQPKSKIT-------HLVFCTTSG---------------------V----DM-PGAD  141 (391)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEccCC---------------------C----cc-cHHH
Confidence            3444455568999999999999999864322       355555431                     0    11 2468


Q ss_pred             HHHHHHhCCCCc---cccccccchHHHHHHHHHHHHHHhccc-ceEeeccCC
Q 024765          213 AVLAMDLGWTGP---SYSISTACASSNYSILNATSHIIKGDT-VSNSPSSQA  260 (263)
Q Consensus       213 ~~ia~~lgl~Gp---~~tv~tACsSsl~Al~~A~~~Lr~G~~-d~~v~Gae~  260 (263)
                      .+|...||++.-   .+.++.+|++++.||..|.++|+.|.. .++|+++|-
T Consensus       142 ~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E~  193 (391)
T PLN03173        142 YQLTKLLGLRSSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEI  193 (391)
T ss_pred             HHHHHHhCCCccceeeehhcCccHHHHHHHHHHHHHHHhCCCCeEEEEEEeh
Confidence            899999999874   467899999999999999999999987 477888884

>PLN03171 chalcone synthase-like protein; Provisional

Probab=98.43  E-value=4.1e-06  Score=77.35  Aligned_cols=95  Identities=15%  Similarity=0.072  Sum_probs=71.2

Q ss_pred             HHhhcCHHHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHH
Q 024765          133 IAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMAS  212 (263)
Q Consensus       133 ~~~~~d~~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  212 (263)
                      ...+......|+.+|+.+||+++|++++.++       .|+++++.+                     +    ..+ ..+
T Consensus       101 ~~~~~~~a~~la~~Aa~~aL~~ag~~~~dId-------~li~~t~t~---------------------~----~~P-~~a  147 (399)
T PLN03171        101 LDIAADAVPELAAEAAKKAIAEWGRPAADIT-------HLVVTTNSG---------------------A----HIP-GVD  147 (399)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEcCCC---------------------C----CCC-chH
Confidence            3344455678999999999999999864433       455655531                     1    122 447


Q ss_pred             HHHHHHhCCCCc---cccccccchHHHHHHHHHHHHHHhcccc-eEeeccCC
Q 024765          213 AVLAMDLGWTGP---SYSISTACASSNYSILNATSHIIKGDTV-SNSPSSQA  260 (263)
Q Consensus       213 ~~ia~~lgl~Gp---~~tv~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~  260 (263)
                      ..|...||++.-   .+.+..+|+++++||..|..+|++|... ++|+++|.
T Consensus       148 ~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~li~~~~~~~vLVv~~e~  199 (399)
T PLN03171        148 FRLVPLLGLRPSVRRTMLHLNGCFAGAAALRLAKDLAENNRGARVLVVAAEI  199 (399)
T ss_pred             HHHHHHhCCCcccceeeccCCccHHHHHHHHHHHHHHHhCCCCeEEEEEEec
Confidence            789999999853   4567779999999999999999999884 77888875

>TIGR02445 fadA fatty oxidation complex, beta subunit FadA

Probab=98.43  E-value=9.6e-07  Score=81.11  Aligned_cols=88  Identities=13%  Similarity=0.054  Sum_probs=64.7

Q ss_pred             HHHHHHHHHHHHHH-cCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 024765          141 LIYALVAGKKALVD-AGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (263)
Q Consensus       141 ~~l~l~aa~~Al~d-AGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l  219 (263)
                      ..|+.++..+||++ +|++++.++       .||+|+...                        .+.....++..++...
T Consensus        26 ~~L~~~a~~~al~~~agl~~~~Id-------~v~~G~~~~------------------------~~~~g~~~ar~~~~~~   74 (385)
T TIGR02445        26 EDLSAHLMSKLLARNPKVDPAEVE-------DIYWGCVQQ------------------------TLEQGFNIARNAALLA   74 (385)
T ss_pred             HHHHHHHHHHHHHhccCCCHHHcC-------EEEEecccc------------------------cccccchHHHHHHHHC
Confidence            45789999999995 699876544       689986520                        0000112555566666


Q ss_pred             CCCC--ccccccccchHHHHHHHHHHHHHHhcccceEe-eccC
Q 024765          220 GWTG--PSYSISTACASSNYSILNATSHIIKGDTVSNS-PSSQ  259 (263)
Q Consensus       220 gl~G--p~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~v-~Gae  259 (263)
                      |+..  |+++|+++|+||+.||+.|+++|+.|++|+++ +|.|
T Consensus        75 g~~~~~p~~tV~~~CaSG~~Ai~~Aa~~I~sG~~d~vlagG~E  117 (385)
T TIGR02445        75 QIPHTSAAVTVNRLCGSSMQALHDAARAIMTGDADVCLVGGVE  117 (385)
T ss_pred             CCCCCcchhhhhhhhHHHHHHHHHHHHHHHCCCCCEEEEeeeh
Confidence            7654  66999999999999999999999999999764 5555

This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.

>PRK06158 thiolase; Provisional

Probab=98.41  E-value=1.2e-06  Score=80.45  Aligned_cols=83  Identities=20%  Similarity=0.062  Sum_probs=63.5

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+.+++.+||+|||++++.++       ++++|+..                          ...   ....++..+|
T Consensus        29 ~eL~~eA~~~Al~dAgl~~~dID-------~iv~~~~~--------------------------~~~---~~~~la~~lG   72 (384)
T PRK06158         29 MELLAQAAHRALADAGLTMADVD-------GLFTASPD--------------------------DAL---WGLSVAEYLG   72 (384)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEecCC--------------------------CCC---cHHHHHHHcC
Confidence            45789999999999999865433       67776521                          001   1235888899


Q ss_pred             CCC-ccccccccchHHHHHHHHHHHHHHhcccceEe-eccC
Q 024765          221 WTG-PSYSISTACASSNYSILNATSHIIKGDTVSNS-PSSQ  259 (263)
Q Consensus       221 l~G-p~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~v-~Gae  259 (263)
                      +++ |.+.+.++|+|+..+|+.|++.|++|.+|.++ +|++
T Consensus        73 l~~~~~~~~~~g~~s~~~al~~A~~~I~sG~~d~vLV~~g~  113 (384)
T PRK06158         73 IRPRFVDGTMIGGSSFLAHLLPAALALEAGLCDVALICYGS  113 (384)
T ss_pred             CCCeeeccccCccHHHHHHHHHHHHHHHcCCCCEEEEeecc
Confidence            976 77889999999999999999999999999765 4343

>PRK12404 stage V sporulation protein AD; Provisional

Probab=98.39  E-value=1.7e-06  Score=76.30  Aligned_cols=83  Identities=17%  Similarity=0.108  Sum_probs=65.8

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+.+|+.+||++||+++++++       .+|+|...                            ...++++.++..||
T Consensus        55 ~~L~~EA~~~AL~kAGI~~~DID-------~i~vGdL~----------------------------nQ~ipssfvar~LG   99 (334)
T PRK12404         55 RKLLEEACSRAIEKAKLRKEDIQ-------FFLAGDLM----------------------------NQITPTSFAARTLG   99 (334)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecC----------------------------CCcCcHHHHHHHhC
Confidence            56899999999999999865433       46666542                            11233457888888


Q ss_pred             CCCccccccccchHHHHHHHHHHHHHHhcccceEeeccCC
Q 024765          221 WTGPSYSISTACASSNYSILNATSHIIKGDTVSNSPSSQA  260 (263)
Q Consensus       221 l~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~v~Gae~  260 (263)
                        =|.+-|.+|||++..||.+|+.+|+.|.+|.+++++.+
T Consensus       100 --IP~~gV~gACSTg~eAL~lAa~~VaSG~Ad~VLavtsS  137 (334)
T PRK12404        100 --IPYLGLFGACSTSMEGLALAALIVNSGGAKYVLTGASS  137 (334)
T ss_pred             --CCccceeecCHHHHHHHHHHHHHHHcCCCCEEEEEeCc
Confidence              46699999999999999999999999999998887654

>PRK06025 acetyl-CoA acetyltransferase; Provisional

Probab=98.23  E-value=5.2e-06  Score=76.65  Aligned_cols=89  Identities=13%  Similarity=0.109  Sum_probs=66.3

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|...+..++|+.+|++++.++       -|++|....                        .+.....++..++..-|
T Consensus        30 ~~L~~~~~~~~l~r~~i~~~~id-------~vi~G~~~~------------------------~g~~g~n~aR~~al~ag   78 (417)
T PRK06025         30 QHLAATVLKALAERNGLNTADVD-------DIIWSTSSQ------------------------RGKQGGDLGRMAALDAG   78 (417)
T ss_pred             HHHHHHHHHHHHHhcCCCHHHCC-------EEEEEcCCC------------------------cCcccCcHHHHHHHhCC
Confidence            34567788999999999875433       488887531                        01111345666777777


Q ss_pred             C--CCccccccccchHHHHHHHHHHHHHHhcccceEeeccCC
Q 024765          221 W--TGPSYSISTACASSNYSILNATSHIIKGDTVSNSPSSQA  260 (263)
Q Consensus       221 l--~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~v~Gae~  260 (263)
                      |  +=|++||+..|+||+.||.+|+++|+.|++|++|+|.-.
T Consensus        79 lp~~vp~~tvnr~C~Sgl~ai~~aa~~I~~G~~~~~laGG~E  120 (417)
T PRK06025         79 YDIKASGVTLDRFCGGGITSVNLAAAQIMSGMEDLVIAGGTE  120 (417)
T ss_pred             CCCCCCeeeeccccchHHHHHHHHHHHHHcCCCCEEEEeeee
Confidence            7  459999999999999999999999999999977655433

>PRK06690 acetyl-CoA acetyltransferase; Provisional

Probab=98.22  E-value=6.8e-06  Score=74.79  Aligned_cols=49  Identities=18%  Similarity=0.256  Sum_probs=41.7

Q ss_pred             HHHHHHHhCCC--CccccccccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          212 SAVLAMDLGWT--GPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       212 a~~ia~~lgl~--Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      +..++...|+.  =|+++|+++|+||+.||..|+++|+.|++|++ ++|+|.
T Consensus        60 ~r~~~~~~Gl~~~~p~~tV~~~CaSG~~Ai~~a~~~I~sG~~d~~l~gG~E~  111 (361)
T PRK06690         60 ARLSALEAGLGLHIPGVTIDRQCGAGLEAIRTACHFIQGGAGKCYIAGGVES  111 (361)
T ss_pred             HHHHHHHcCCCCCCCceehhhhhhHHHHHHHHHHHHHHCCCCCEEEEecccc
Confidence            44577888886  49999999999999999999999999999965 555553

>PLN02192 3-ketoacyl-CoA synthase

Probab=98.21  E-value=2.2e-05  Score=74.07  Aligned_cols=150  Identities=16%  Similarity=0.161  Sum_probs=95.3

Q ss_pred             CcEEEEecceeCCcC---CCHHHHHHHHHcCCCceeeCCCCCCCC--C------CceeEEecCCCCCCCC-CCHHH--Hh
Q 024765           70 RRIVVTGLGAVTPLG---DDAHLFHTSLLEGVTGISDIQGFDCSE--F------PTRIAAEIKSLSTGGW-ISPKI--AK  135 (263)
Q Consensus        70 ~~VaItG~g~~~p~g---~~~~~~w~~L~~G~~~i~~~~~~~~~~--~------~~~~~g~i~~fd~~~~-i~~~~--~~  135 (263)
                      ++|+.+.++|.-|.-   .+.+.|-+....-.       .|+.+.  |      ....| +=.-+.+..+ ++|..  ..
T Consensus       100 ~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~-------~~~~~~~~f~~~~~~~sglg-~~t~~p~~~~~~~~~~~~~~  171 (511)
T PLN02192        100 RPVYLVDFSCYKPDDSRKCTRKIFMDRSKLTG-------SFTEENLEFQRKILERSGLG-ESTYLPEAVLNVPPNPCMAE  171 (511)
T ss_pred             CcEEEEeeeeecCCccccccHHHHHHHHHHcC-------CCCHHHHHHHHHHHHhcCCC-CcccCChhhccCCCCccHHH
Confidence            579999999999976   56777777664321       111110  0      00000 0000111111 22211  11


Q ss_pred             hcCHHHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHH
Q 024765          136 KADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVL  215 (263)
Q Consensus       136 ~~d~~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i  215 (263)
                      ...-...++..|+.+||+++|++|+        ++.++|-++..                         ......++..|
T Consensus       172 ~~~Ea~~~~~~Aa~~aL~kaGi~p~--------DIDiLIv~~S~-------------------------~~~~PSlaa~I  218 (511)
T PLN02192        172 ARKEAETVMFGAIDQLLAKTSVKPK--------DIGILIVNCSL-------------------------FNPTPSLSAMV  218 (511)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCCHH--------HCCEEEEECCC-------------------------CCCCchHHHHH
Confidence            1223567899999999999999864        34455433321                         11234568899


Q ss_pred             HHHhCCCC--cccccc-ccchHHHHHHHHHHHHHHhccc-ceEeeccCC
Q 024765          216 AMDLGWTG--PSYSIS-TACASSNYSILNATSHIIKGDT-VSNSPSSQA  260 (263)
Q Consensus       216 a~~lgl~G--p~~tv~-tACsSsl~Al~~A~~~Lr~G~~-d~~v~Gae~  260 (263)
                      ...+|++.  .++.++ .+|++++.||..|.++|+.|.. .++|+|+|.
T Consensus       219 ~n~lGlr~~i~afdLsgmGCSggl~aLdlA~~lL~a~~~~~aLVVstE~  267 (511)
T PLN02192        219 INHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLQVHPNSYALVISMEN  267 (511)
T ss_pred             HHHhCCCCCceEEEcccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEEe
Confidence            99999984  789999 6999999999999999999988 477888885

>PRK08142 acetyl-CoA acetyltransferase; Provisional

Probab=98.16  E-value=7.7e-06  Score=75.23  Aligned_cols=84  Identities=20%  Similarity=0.098  Sum_probs=62.8

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+.+++.+||+|||+++++   ++    +++.+...                    .     ..  .  ...++..+|
T Consensus        26 ~~L~~eA~~~Al~DAgl~~~d---ID----~~~~~~~~--------------------~-----~~--~--~~~~~~~lG   69 (388)
T PRK08142         26 AQLHAEVAKGALADAGLSLAD---VD----GYFCAGDA--------------------P-----GL--G--PASMVDYLG   69 (388)
T ss_pred             HHHHHHHHHHHHHHcCCCHHH---CC----EEEEcCCC--------------------C-----Cc--c--HHHHHHhCC
Confidence            457899999999999998544   33    34431110                    0     00  0  134889999


Q ss_pred             CCC-ccccccccchHHHHHHHHHHHHHHhcccceEe-eccCC
Q 024765          221 WTG-PSYSISTACASSNYSILNATSHIIKGDTVSNS-PSSQA  260 (263)
Q Consensus       221 l~G-p~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~v-~Gae~  260 (263)
                      +++ |...+.++|+|+..+|..|+..|++|.+|+++ +|+|-
T Consensus        70 l~~~~~~~v~~gg~s~~~a~~~A~~~I~sG~~d~vLvvg~e~  111 (388)
T PRK08142         70 LKLRHVDSTETGGSSYLAHVGHAAQAIAAGKCSVALITLAGR  111 (388)
T ss_pred             CCCeeeccccCCcHHHHHHHHHHHHHHHcCCCCEEEEEeeee
Confidence            976 78889999999999999999999999999765 67774

>PLN02577 hydroxymethylglutaryl-CoA synthase

Probab=98.11  E-value=3.4e-05  Score=72.20  Aligned_cols=138  Identities=14%  Similarity=0.136  Sum_probs=86.9

Q ss_pred             CcEEEEecceeCCcC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHH
Q 024765           70 RRIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (263)
Q Consensus        70 ~~VaItG~g~~~p~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa  148 (263)
                      ++|-|.|+|..+|.- .+.+++-+.+  |.+     +.|-..+...+.-.    +     ..+.     ....-|+..|+
T Consensus         3 ~~vgI~gig~Y~P~~~v~n~eLa~~~--g~~-----~~~~~~GI~~r~~a----v-----a~~~-----Ed~~tmA~~AA   61 (459)
T PLN02577          3 KNVGILAMEVYFPPTCVQQEALEAHD--GVS-----KGKYTIGLGQDCMA----F-----CTDV-----EDVISMSLTVV   61 (459)
T ss_pred             CccEEEEEEEeCCCeEEcHHHHHHHh--CCC-----HHHHhhccceeEec----c-----CCCC-----CCHHHHHHHHH
Confidence            368999999999987 6766665542  111     01100011110000    0     0011     11357899999


Q ss_pred             HHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHH---HHhCCCC-c
Q 024765          149 KKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLA---MDLGWTG-P  224 (263)
Q Consensus       149 ~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia---~~lgl~G-p  224 (263)
                      .++|+++|++++.++       -|++|+..+..                        . ....+..|.   ..+|.+. .
T Consensus        62 ~~aL~~agid~~~Id-------llivaTeT~~d------------------------~-~ps~A~~v~~ll~~LG~~~~~  109 (459)
T PLN02577         62 KSLLEKYNIDPKQIG-------RLEVGSETVID------------------------K-SKSIKTFLMQLFEESGNTDIE  109 (459)
T ss_pred             HHHHHHcCCCHHHCC-------EEEEEcCCCCC------------------------C-CCchHHHHHHHHHHhCCCCcE
Confidence            999999999865433       46777764210                        1 123344554   4556644 6


Q ss_pred             cccccccchHHHHHHHHHHHHHHhccc---ceEeeccCC
Q 024765          225 SYSISTACASSNYSILNATSHIIKGDT---VSNSPSSQA  260 (263)
Q Consensus       225 ~~tv~tACsSsl~Al~~A~~~Lr~G~~---d~~v~Gae~  260 (263)
                      ++-+..||++++.||..|..+|++|..   .++|+|+|.
T Consensus       110 afDi~~AC~G~~~AL~~A~~~i~sg~~~~~~aLVV~aD~  148 (459)
T PLN02577        110 GVDSTNACYGGTAALLNCVNWVESSSWDGRYGLVVAADS  148 (459)
T ss_pred             EeehhhhhHHHHHHHHHHHHHHHcCCCCCCeEEEEEech
Confidence            889999999999999999999999974   477888875

>PRK07855 lipid-transfer protein; Provisional

Probab=98.10  E-value=1.1e-05  Score=74.22  Aligned_cols=81  Identities=19%  Similarity=0.071  Sum_probs=60.3

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+.+++++||+|||++++.++       ++++++..                           ...   ...++..+|
T Consensus        25 ~~L~~eA~~~Al~DAgl~~~dID-------~~~~~~~~---------------------------~~~---~~~l~~~lG   67 (386)
T PRK07855         25 LRLACEAVLAALDDAGLAPSDVD-------GLVTFTMD---------------------------TNP---EIAVARALG   67 (386)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEecCc---------------------------ccc---HHHHHHHCC
Confidence            35789999999999999754433       55553210                           000   134889999


Q ss_pred             CCC--ccccccccchHHHHHHHHHHHHHHhcccceEee-cc
Q 024765          221 WTG--PSYSISTACASSNYSILNATSHIIKGDTVSNSP-SS  258 (263)
Q Consensus       221 l~G--p~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~v~-Ga  258 (263)
                      +++  |...|.++|+|+..+|..|+..|++|.||++++ |+
T Consensus        68 l~~~~~~~~v~~gg~sg~~~~~~A~~~I~sG~~d~vLv~g~  108 (386)
T PRK07855         68 IGELKFFSRIHYGGGAACATVQQAAMAVATGVADVVVCYRA  108 (386)
T ss_pred             CCCCcceeeecCCcHHHHHHHHHHHHHHHCCCCCEEEEEee
Confidence            987  345789999999999999999999999997654 44

>PLN02377 3-ketoacyl-CoA synthase

Probab=98.05  E-value=6.7e-05  Score=70.87  Aligned_cols=150  Identities=12%  Similarity=0.125  Sum_probs=96.2

Q ss_pred             CcEEEEecceeCCcC---CCHHHHHHHHHcCCCceeeCCCCCCCCC--------CceeEEecCCCCCCCC-CCHH--HHh
Q 024765           70 RRIVVTGLGAVTPLG---DDAHLFHTSLLEGVTGISDIQGFDCSEF--------PTRIAAEIKSLSTGGW-ISPK--IAK  135 (263)
Q Consensus        70 ~~VaItG~g~~~p~g---~~~~~~w~~L~~G~~~i~~~~~~~~~~~--------~~~~~g~i~~fd~~~~-i~~~--~~~  135 (263)
                      ++|+.+.++|.-|.-   .+.+.|-+....-.       .|+.+..        ...+|.+. -+++..+ ++|.  ...
T Consensus        96 ~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~-------~~~~~~~~f~~ri~~~sgig~~t-~~p~~~~~~~~~~~~~~  167 (502)
T PLN02377         96 RPVYLVDYSCYRAPDHLKAPFARFMEHSRLTG-------DFDDSSLEFQRKILERSGLGEDT-YVPEAMHYIPPRPSMAA  167 (502)
T ss_pred             CCEEEEeeeeecCCccccccHHHHHHHHHHhC-------CCCHHHHHHHHHHHHhcCCCCcc-ccCchhccCCccchHHH
Confidence            679999999999976   56777777665321       1111100        00000000 0111111 2222  222


Q ss_pred             hcCHHHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHH
Q 024765          136 KADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVL  215 (263)
Q Consensus       136 ~~d~~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i  215 (263)
                      ...-...++..|+.+||+++|+++++        +.++|-++.+.                         ......+..|
T Consensus       168 ~~~ea~~l~~~A~~~aL~kaGi~p~d--------ID~LVv~cS~~-------------------------~~~PSlaa~V  214 (502)
T PLN02377        168 AREEAEQVMFGALDNLFANTNVNPKD--------IGILVVNCSLF-------------------------NPTPSLSAMI  214 (502)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCCHHH--------CCEEEEECCCC-------------------------CCCCcHHHHH
Confidence            33345788999999999999998643        33444444310                         1123558899


Q ss_pred             HHHhCCCC--cccccc-ccchHHHHHHHHHHHHHHhcccc-eEeeccCC
Q 024765          216 AMDLGWTG--PSYSIS-TACASSNYSILNATSHIIKGDTV-SNSPSSQA  260 (263)
Q Consensus       216 a~~lgl~G--p~~tv~-tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~  260 (263)
                      ...||++.  .++.++ .+|++++.||.+|.++|+.|... ++|+++|.
T Consensus       215 ~~~LGlr~~v~afdL~gmGCsggl~aL~lA~~ll~~~~~~~aLVVstE~  263 (502)
T PLN02377        215 VNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDMLQVHRNTYAVVVSTEN  263 (502)
T ss_pred             HHHhCCCCCCeEEecccchhhHHHHHHHHHHHHHHcCCCCEEEEEEEec
Confidence            99999985  689999 69999999999999999999885 77789885

>PLN02854 3-ketoacyl-CoA synthase

Probab=98.05  E-value=8.4e-05  Score=70.35  Aligned_cols=150  Identities=15%  Similarity=0.178  Sum_probs=95.5

Q ss_pred             CcEEEEecceeCCcC---CCHHHHHHHHHcCCCceeeCCCCCCCC--C------CceeEEecCCCCCCCC-CCHH--HHh
Q 024765           70 RRIVVTGLGAVTPLG---DDAHLFHTSLLEGVTGISDIQGFDCSE--F------PTRIAAEIKSLSTGGW-ISPK--IAK  135 (263)
Q Consensus        70 ~~VaItG~g~~~p~g---~~~~~~w~~L~~G~~~i~~~~~~~~~~--~------~~~~~g~i~~fd~~~~-i~~~--~~~  135 (263)
                      ++|+.+.++|.-|.-   .+.+.|-+....-.       .|+.+.  |      ....| +=.-+.+..+ ++|+  ...
T Consensus       112 ~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~-------~~~~~~~~f~~~~~~~sg~g-~~ty~P~~~~~~~~~~~~~~  183 (521)
T PLN02854        112 KPVYLVDFACYKPEDERKISVDSFLTMTEENG-------SFEDETVQFQRRISTRSGLG-DETYLPRGITSRPPNLCMEE  183 (521)
T ss_pred             CcEEEEeeeeecCCccccccHHHHHHHHHHcC-------CCCHHHHHHHHHHHHhcCCC-CccccCccccCCCCcchHHH
Confidence            579999999999976   56777777765331       111110  0      00000 0000111112 3332  222


Q ss_pred             hcCHHHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHH
Q 024765          136 KADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVL  215 (263)
Q Consensus       136 ~~d~~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i  215 (263)
                      ...-....+..++.++|+++|++++        +++++|-++.+                         ......++..|
T Consensus       184 ~r~ea~~v~~~~~~~lL~kaGi~p~--------dID~LIv~cS~-------------------------~~p~PSlAa~I  230 (521)
T PLN02854        184 ARAEAEAVMFGALDSLFSKTGVKPR--------DIGILIVNCSL-------------------------FNPTPSLSAMI  230 (521)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCCHH--------HCCEEEEECCC-------------------------CCCCCCHHHHH
Confidence            2334566788899999999999864        34455534321                         01123568899


Q ss_pred             HHHhCCCC--cccccc-ccchHHHHHHHHHHHHHHhcccc-eEeeccCC
Q 024765          216 AMDLGWTG--PSYSIS-TACASSNYSILNATSHIIKGDTV-SNSPSSQA  260 (263)
Q Consensus       216 a~~lgl~G--p~~tv~-tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~  260 (263)
                      ...||+++  .++.++ .+|++++.||..|.++|+.|... ++|+++|.
T Consensus       231 ~n~LGlr~~i~afdLsgmGCSggl~aL~lA~~lL~~~~~~~aLVVstE~  279 (521)
T PLN02854        231 VNHYKLRTDIKSYNLGGMGCSAGLISIDLANDLLKANPNSYAVVVSTEN  279 (521)
T ss_pred             HHHhCCCCCceEEecccchhhhHHHHHHHHHHHHHhCCCCeEEEEEEee
Confidence            99999984  578888 89999999999999999999885 77889885

>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]

Probab=98.02  E-value=8.7e-06  Score=74.99  Aligned_cols=52  Identities=21%  Similarity=0.279  Sum_probs=45.9

Q ss_pred             chHHHHHHHHHhCCCC--ccccccccchHHHHHHHHHHHHHHhcccceEeeccC
Q 024765          208 TNMASAVLAMDLGWTG--PSYSISTACASSNYSILNATSHIIKGDTVSNSPSSQ  259 (263)
Q Consensus       208 ~~~~a~~ia~~lgl~G--p~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~v~Gae  259 (263)
                      ...++..++...|+.+  |.++|+.+|+||+.|++.|++.|++|++|++++|..
T Consensus        66 ~~~~ar~~a~~aGl~~~~p~~~V~~~c~SG~~Av~~A~~~I~sG~~dvvlagG~  119 (392)
T COG0183          66 GQNIARQAALAAGLPGSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGV  119 (392)
T ss_pred             cccHHHHHHHHcCCCCCCCceEEeccchhHHHHHHHHHHHHHCCCCCEEEEEee
Confidence            3456788999999997  999999999999999999999999999998765544

>PRK08257 acetyl-CoA acetyltransferase; Validated

Probab=98.00  E-value=2.4e-05  Score=74.18  Aligned_cols=87  Identities=17%  Similarity=0.134  Sum_probs=64.1

Q ss_pred             HHHHHHHHHHHHHHcCCC--CcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHH
Q 024765          141 LIYALVAGKKALVDAGIT--EQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMD  218 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~--~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~  218 (263)
                      ..|+.+++++||+|||+.  ++.++       +++++....                       +.   .+.....++..
T Consensus        28 ~~L~~eA~~~Al~DAGl~~~~~dID-------~v~v~~~~~-----------------------~~---~~~~~~~la~~   74 (498)
T PRK08257         28 VDLMAAAARAAAADAGADAVLEAID-------SVAVVNQLS-----------------------WR---YRDPPGLLAER   74 (498)
T ss_pred             HHHHHHHHHHHHHhcCCCcCHHHCC-------EEEEecccc-----------------------cc---ccCHHHHHHHH
Confidence            457899999999999997  54433       667664311                       00   12234679999


Q ss_pred             hCCCC-ccccccccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          219 LGWTG-PSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       219 lgl~G-p~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      +|+.. +.....++|+|+..+|+.|+..|++|++|++ |+|+|.
T Consensus        75 lGl~p~~~~~~~~GG~s~~~~v~~Aa~~IasG~advVLv~G~E~  118 (498)
T PRK08257         75 LGADPARTVYSPVGGNSPQRLVNEAALRIAAGEADVALVAGAEA  118 (498)
T ss_pred             cCCCCcceeEecCCCHHHHHHHHHHHHHHHCCCCCEEEEeeeee
Confidence            99964 4445667888999999999999999999966 578885

>PLN02932 3-ketoacyl-CoA synthase

Probab=97.97  E-value=3.6e-05  Score=72.21  Aligned_cols=151  Identities=13%  Similarity=0.117  Sum_probs=98.3

Q ss_pred             CcEEEEecceeCCcC---CCHHHHHHHHHcCCCceeeCCCCCCCC-----C------CceeE--EecCCCCCCCC-CCHH
Q 024765           70 RRIVVTGLGAVTPLG---DDAHLFHTSLLEGVTGISDIQGFDCSE-----F------PTRIA--AEIKSLSTGGW-ISPK  132 (263)
Q Consensus        70 ~~VaItG~g~~~p~g---~~~~~~w~~L~~G~~~i~~~~~~~~~~-----~------~~~~~--g~i~~fd~~~~-i~~~  132 (263)
                      ++|+.+.++|.-|.-   .+.+.|-+....-+..    ..|+.+.     |      .+.++  .+++   +... +++.
T Consensus        66 ~~vyl~d~~c~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~f~~~i~~rsGig~~t~~p---~~~~~~~~~  138 (478)
T PLN02932         66 KPVYLVDFSCYLPPSHLKASIQTIMGHVRRVREA----GAWKQESDYLMDFCEKILERSGLGQETYIP---EGLQCLPLQ  138 (478)
T ss_pred             CcEEEEeeeeecCcccccccHHHHHHHHHhhccc----CCCCccchhHHHHHHHHHHHcCCCCceeec---cccccCCHH
Confidence            679999999999976   5778888776433210    0111111     0      00000  0111   1111 3333


Q ss_pred             H--HhhcCHHHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchH
Q 024765          133 I--AKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNM  210 (263)
Q Consensus       133 ~--~~~~d~~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (263)
                      +  .....-...++..|+.+||+++|++|++++       -|++.++.+                          .....
T Consensus       139 ~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dId-------~lIv~tst~--------------------------~~~Ps  185 (478)
T PLN02932        139 QNLAVSRKETEEVIIGAVDNLFRNTGISPSDIG-------ILVVNSSTF--------------------------NPTPS  185 (478)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEccCC--------------------------CCCCc
Confidence            2  233344678999999999999999864322       344555421                          12335


Q ss_pred             HHHHHHHHhCCCC--cccccc-ccchHHHHHHHHHHHHHHhcccc-eEeeccCC
Q 024765          211 ASAVLAMDLGWTG--PSYSIS-TACASSNYSILNATSHIIKGDTV-SNSPSSQA  260 (263)
Q Consensus       211 ~a~~ia~~lgl~G--p~~tv~-tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~  260 (263)
                      .+..|...||++.  .++.++ .+|++++.||.+|.++|+.|... ++|+++|.
T Consensus       186 laa~V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~~~~~~~aLVVstE~  239 (478)
T PLN02932        186 LSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQVHRNTYALVVSTEN  239 (478)
T ss_pred             HHHHHHHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEee
Confidence            6889999999973  689998 89999999999999999999874 77889885

>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade

Probab=97.95  E-value=4e-05  Score=70.35  Aligned_cols=85  Identities=21%  Similarity=0.214  Sum_probs=65.5

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCce-EEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRC-GVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~-gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l  219 (263)
                      .-|+.+|+.+||+++  +++        ++ .|++|+..+.                         ......+..|...|
T Consensus        50 ~~la~~Aa~~aL~~a--~~~--------~Id~li~~t~s~~-------------------------~~~~s~a~~v~~~L   94 (379)
T TIGR01835        50 VTMAASAAKPILDRN--DKQ--------KIDMVIFGTESGI-------------------------DQSKAAAVYVHGLL   94 (379)
T ss_pred             HHHHHHHHHHHHHhC--CHh--------hCCEEEEEeCCCC-------------------------CCCCCHHHHHHHHh
Confidence            578999999999998  432        33 4667775421                         11124688899999


Q ss_pred             CCCC--ccccccccchHHHHHHHHHHHHHHhcccc-eEeeccCC
Q 024765          220 GWTG--PSYSISTACASSNYSILNATSHIIKGDTV-SNSPSSQA  260 (263)
Q Consensus       220 gl~G--p~~tv~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~  260 (263)
                      |+++  +++.|..+|++++.||+.|..+|+.|..+ ++|+|+|-
T Consensus        95 gl~~~~~~~dv~~aC~gg~~aL~~A~~~i~s~~~~~aLVv~~D~  138 (379)
T TIGR01835        95 GLQPFCRSFELKQACYGATAALQMAKGHVALSPDRKVLVIASDI  138 (379)
T ss_pred             CCCCCceEEEeccccHHHHHHHHHHHHHHHcCCCCeEEEEEeeh
Confidence            9975  78899999999999999999999999886 56677763

This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.

>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]

Probab=97.85  E-value=1.9e-05  Score=67.46  Aligned_cols=82  Identities=27%  Similarity=0.425  Sum_probs=64.9

Q ss_pred             HHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCC
Q 024765          143 YALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWT  222 (263)
Q Consensus       143 l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~  222 (263)
                      ++-++...||+|+|+.   ....+..-+|-++|-+.                                +..|.-|.+|++
T Consensus        32 ~a~ea~tkal~da~ik---ys~vqqa~vgyvfgdst--------------------------------cgqraiyevgmt   76 (408)
T KOG1406|consen   32 FAKEAITKALQDAGIK---YSEVQQAVVGYVFGDST--------------------------------CGQRAIYEVGMT   76 (408)
T ss_pred             HHHHHHHHHHHhcCCC---HHHHHhhhheeeecCCc--------------------------------cchHHHHhcccc
Confidence            4667889999999997   34455666777777542                                233455788999


Q ss_pred             C-ccccccccchHHHHHHHHHHHHHHhcccceEe-eccC
Q 024765          223 G-PSYSISTACASSNYSILNATSHIIKGDTVSNS-PSSQ  259 (263)
Q Consensus       223 G-p~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~v-~Gae  259 (263)
                      | |.+.|++.|+++..||-+|.+.|++|..|.++ .|.|
T Consensus        77 gipi~nvnnncatgssalflakqiiesgn~dcvlalgfe  115 (408)
T KOG1406|consen   77 GIPIYNVNNNCATGSSALFLAKQIIESGNSDCVLALGFE  115 (408)
T ss_pred             CcceeeccCccccCchHHHHHHHHHhcCCcceEEeechh
Confidence            9 99999999999999999999999999999775 4544

>PRK06066 acetyl-CoA acetyltransferase; Provisional

Probab=97.83  E-value=5.9e-05  Score=69.30  Aligned_cols=84  Identities=17%  Similarity=0.116  Sum_probs=57.2

Q ss_pred             HHHHHHHHHHHHHHcC-CCC-cccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHH
Q 024765          141 LIYALVAGKKALVDAG-ITE-QVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMD  218 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAG-l~~-~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~  218 (263)
                      ..|+.+++++||+||| +++ ++++       ++++++.. ..                      .+.  ......++..
T Consensus        26 ~eL~~eA~~~Al~DAG~l~~~~dId-------~~~~~~~~-~~----------------------~~~--~~~~~~~~~~   73 (385)
T PRK06066         26 REMMFEAASRAYKDAGNINPRRDVD-------SFISCQED-FW----------------------EGI--AIADEFAPDQ   73 (385)
T ss_pred             HHHHHHHHHHHHHhcCCCCChhcCC-------EEEEecCc-cc----------------------Ccc--cccchhHHHH
Confidence            4589999999999999 874 2333       56665310 00                      000  0111236677


Q ss_pred             hCCC-CccccccccchHHHHHHHHHHHHHHhcccceE-eeccC
Q 024765          219 LGWT-GPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQ  259 (263)
Q Consensus       219 lgl~-Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae  259 (263)
                      +|+. .|.+.|   |+|+..+++.|+.+|++|.||++ |+|.|
T Consensus        74 lg~~~~~~~~v---~~sg~~a~~~A~~aV~sG~~d~vLv~g~~  113 (385)
T PRK06066         74 IGGAMRPTMTV---AGDGLQGLAHAVMHINSGLANVVVVEAHS  113 (385)
T ss_pred             cccCCCCeEEE---eCcHHHHHHHHHHHHHcCCCCEEEEEEEe
Confidence            8884 477766   89999999999999999999966 45554

>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]

Probab=97.73  E-value=6.3e-05  Score=65.91  Aligned_cols=90  Identities=21%  Similarity=0.240  Sum_probs=66.0

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      +.|.-.+...||+.+++++...+       -||+|.-.                         .......++.+.+---|
T Consensus        31 ~~Lgsvaikaalera~v~~~~v~-------eVi~GnVl-------------------------~AnlGQapaRQaalgAG   78 (396)
T KOG1390|consen   31 TELGSVAIKAALERAVVPPSDVA-------EVIFGNVL-------------------------SANLGQAPARQAALGAG   78 (396)
T ss_pred             hhHHHHHHHHHHHhcCCCHHHhh-------hhhhcccc-------------------------ccccCcchHHHHHhhcC
Confidence            56777899999999988753211       36777532                         12233445566665555


Q ss_pred             C--CCccccccccchHHHHHHHHHHHHHHhcccceEeeccCCCC
Q 024765          221 W--TGPSYSISTACASSNYSILNATSHIIKGDTVSNSPSSQADI  262 (263)
Q Consensus       221 l--~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~v~Gae~~i  262 (263)
                      |  .=|+.||+--|+||+.||.+|++.|+.|..|++|+|.-..+
T Consensus        79 lp~sv~~tTvNkvCaSgmKAv~laaQsI~~G~~divVaGGmEsM  122 (396)
T KOG1390|consen   79 LPYSVPATTVNKVCASGMKAVILAAQSIQTGHADIVVAGGMESM  122 (396)
T ss_pred             CCcceeeEeehhhhhhhHHHHHHHHHHHhcCCccEEEecccchh
Confidence            5  45899999999999999999999999999998887765443

>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade

Probab=97.71  E-value=0.00013  Score=68.27  Aligned_cols=89  Identities=15%  Similarity=0.083  Sum_probs=64.5

Q ss_pred             HHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 024765          140 YLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (263)
Q Consensus       140 ~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l  219 (263)
                      ..-|++.|+.++|+++|++++.++       -|++|+..+...                         ....+..|...|
T Consensus        50 ~~tma~~AA~~lL~~a~id~~~Id-------~Liv~TeS~~d~-------------------------sps~a~~v~~lL   97 (454)
T TIGR01833        50 INSLCLTVVSKLMERYNIDYNQIG-------RLEVGTETIIDK-------------------------SKSVKTVLMQLF   97 (454)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEECCCCCCC-------------------------CCchHHHHHHHH
Confidence            356899999999999998864322       466776542111                         123466777766


Q ss_pred             CC---CC-ccccccccchHHHHHHHHHHHHHHhccc---ceEeeccCC
Q 024765          220 GW---TG-PSYSISTACASSNYSILNATSHIIKGDT---VSNSPSSQA  260 (263)
Q Consensus       220 gl---~G-p~~tv~tACsSsl~Al~~A~~~Lr~G~~---d~~v~Gae~  260 (263)
                      ++   +. .++-+..||+++..||..|..+|++|..   .++|+|+|-
T Consensus        98 ~~lG~~~~~~fDi~~AC~G~t~AL~~A~~~i~s~~~~~~~aLVV~sDi  145 (454)
T TIGR01833        98 EESGNTDVEGIDTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDI  145 (454)
T ss_pred             HhcCCCCceEEeccccchhHHHHHHHHHHHHHcCCcCCCeEEEEEecc
Confidence            54   22 5788999999999999999999999974   367777764

Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.

>PLN00415 3-ketoacyl-CoA synthase

Probab=97.37  E-value=0.003  Score=59.04  Aligned_cols=152  Identities=13%  Similarity=0.087  Sum_probs=88.5

Q ss_pred             CcEEEEecceeCCcC---CCHHHHHHHHHcCCCceeeC-CCC-----CCCCCCceeEEecCCCCCCCC-CCHHH-HhhcC
Q 024765           70 RRIVVTGLGAVTPLG---DDAHLFHTSLLEGVTGISDI-QGF-----DCSEFPTRIAAEIKSLSTGGW-ISPKI-AKKAD  138 (263)
Q Consensus        70 ~~VaItG~g~~~p~g---~~~~~~w~~L~~G~~~i~~~-~~~-----~~~~~~~~~~g~i~~fd~~~~-i~~~~-~~~~d  138 (263)
                      ++|+.+.++|.-|.-   .+.+.|-+....-. .+.+- -+|     ...+.....  ++   ..... .+|.. .+.-+
T Consensus        58 ~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~-~~~~~s~~F~~~i~~rSGlg~et--~~---p~~~~~~~~~~~~~~~~  131 (466)
T PLN00415         58 KPVYLVDFSCHQPTDSCKISSETFFNMAKGAQ-LYTEETIQFMTRILNRSGLGDDT--YS---PRCMLTSPPTPSMYEAR  131 (466)
T ss_pred             CcEEEEeeeeecCCccccccHHHHHHHHHHcC-CCCHHHHHHHHHHHHHcCCCCCe--ee---CCccccCCCCCChhhhH
Confidence            579999999999876   56777777765321 01000 000     000111000  00   00110 11110 00112


Q ss_pred             HHHHHHH-HHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHH
Q 024765          139 KYLIYAL-VAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAM  217 (263)
Q Consensus       139 ~~~~l~l-~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~  217 (263)
                      ....+.+ .|+.+||+++|++++        ++.++|-++.+.                         ......+.+|..
T Consensus       132 ~e~em~i~~A~~~aL~~aGi~p~--------dID~LIvs~T~~-------------------------~~~Pslaa~l~~  178 (466)
T PLN00415        132 HESELVIFGALNSLFKKTGIEPR--------EVGIFIVNCSLF-------------------------NPNPSLSSMIVN  178 (466)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCHH--------HCCEEEEECcCC-------------------------CCCchHHHHHHH
Confidence            2334444 477788899999864        334444333210                         112355778999


Q ss_pred             HhCCCC--ccccccc-cchHHHHHHHHHHHHHHhccc-ceEeeccCC
Q 024765          218 DLGWTG--PSYSIST-ACASSNYSILNATSHIIKGDT-VSNSPSSQA  260 (263)
Q Consensus       218 ~lgl~G--p~~tv~t-ACsSsl~Al~~A~~~Lr~G~~-d~~v~Gae~  260 (263)
                      .+|++.  ..+.|+. +|++++.+|..|.++++.+.. .++|+++|.
T Consensus       179 ~LGLr~~v~~~dL~gmGCsggv~aL~lA~~ll~a~~~~~aLVVs~E~  225 (466)
T PLN00415        179 RYKLKTDVKTYNLSGMGCSAGAISVDLATNLLKANPNTYAVIVSTEN  225 (466)
T ss_pred             HhCCCCCceEEEeccccchHHHHHHHHHHHHHHhCCCCEEEEEEEec
Confidence            999972  4688887 999999999999999999987 477888885

>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species

Probab=97.27  E-value=0.0095  Score=52.29  Aligned_cols=153  Identities=12%  Similarity=0.105  Sum_probs=93.9

Q ss_pred             CcEEEEecceeCCcC---CCHHHHHHHHHcCCCc----eeeCCC-CCCCCCCceeEEecCCCCCCCC-CCHH--HHhhcC
Q 024765           70 RRIVVTGLGAVTPLG---DDAHLFHTSLLEGVTG----ISDIQG-FDCSEFPTRIAAEIKSLSTGGW-ISPK--IAKKAD  138 (263)
Q Consensus        70 ~~VaItG~g~~~p~g---~~~~~~w~~L~~G~~~----i~~~~~-~~~~~~~~~~~g~i~~fd~~~~-i~~~--~~~~~d  138 (263)
                      ++|+.+.+.|.-|.-   .+.+.|++.......-    +....+ +...++...  .+++   +..+ ++|.  -.+..+
T Consensus         7 r~VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~f~~~sl~F~~kIlerSGlG~e--Ty~P---~~~~~~p~~~s~~~a~~   81 (290)
T PF08392_consen    7 RPVYLVDFACYKPPDELRVSREEFIEHARRCGRFDEESLDFQRKILERSGLGDE--TYLP---PALHEIPPDPSLAAARE   81 (290)
T ss_pred             CCEEEEeeeecCCCcccccCHHHHHHHHHhcccCChhHHHHHHHHHHhcCCCcc--ccCC---cccccCCCcccHHHHHH
Confidence            589999999999976   5788888887653210    000000 000010000  0011   1111 2222  112223


Q ss_pred             HHHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHH
Q 024765          139 KYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMD  218 (263)
Q Consensus       139 ~~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~  218 (263)
                      -...++..++.++|+.+|+.|+        +++++|-++.                         .......+++.|.+.
T Consensus        82 Eae~v~f~av~~LL~ktgv~p~--------dIdiLVvncs-------------------------~f~ptPSLsamIvnr  128 (290)
T PF08392_consen   82 EAEMVIFGAVDDLLAKTGVKPS--------DIDILVVNCS-------------------------LFNPTPSLSAMIVNR  128 (290)
T ss_pred             HHHHHHHHHHHHHHHHcCCCHH--------HCCEEEEECc-------------------------CCCcCCcHHHHHHHH
Confidence            4566888999999999998863        4555554442                         112233668889999


Q ss_pred             hCCCCcccc---ccccchHHHHHHHHHHHHHHhcccc-eEeeccCC
Q 024765          219 LGWTGPSYS---ISTACASSNYSILNATSHIIKGDTV-SNSPSSQA  260 (263)
Q Consensus       219 lgl~Gp~~t---v~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~  260 (263)
                      ||++.-..+   .+-+|++|+.+|.+|.++|+...-. ++|+..|.
T Consensus       129 ~~mr~di~~~nLsGMGCsAgliai~lA~~lL~~~p~~~ALVVstE~  174 (290)
T PF08392_consen  129 YGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQAHPNSYALVVSTEN  174 (290)
T ss_pred             hCCCcCeeeecccCCcchhhHHHHHHHHHHHHhCCCcEEEEEEEee
Confidence            999985544   3468999999999999999998864 56777765

The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane

>PRK07937 lipid-transfer protein; Provisional

Probab=97.11  E-value=0.0021  Score=58.45  Aligned_cols=83  Identities=11%  Similarity=0.088  Sum_probs=52.2

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccc-cchHHHHHHHHHh
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYS-LTNMASAVLAMDL  219 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~ia~~l  219 (263)
                      ..|+.+++.+||+|||+++++   ++    +++.+..        +.               +.+. ..   ...+...+
T Consensus        25 ~el~~eA~~~Al~DAgl~~~d---ID----~~~~~~~--------~~---------------~~~~~~~---~~~~~~~~   71 (352)
T PRK07937         25 VEMLMPCFAELYAELGITKSD---IG----FWCSGSS--------DY---------------LAGRAFS---FISAIDSI   71 (352)
T ss_pred             HHHHHHHHHHHHHHcCCCHHH---CC----EEEEEcc--------cc---------------ccccccc---hhhHHhhc
Confidence            458999999999999999654   33    4543321        00               0000 00   11234556


Q ss_pred             CCC-C-ccccccccchHHHHHHHHHHHHHHhcccceE-eeccC
Q 024765          220 GWT-G-PSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQ  259 (263)
Q Consensus       220 gl~-G-p~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae  259 (263)
                      |+. + |...+.   ++|..||+.|+..|++|.||++ |.|.|
T Consensus        72 G~~~~~~~~~v~---~~g~~a~~~A~~aI~sG~~d~VLv~g~~  111 (352)
T PRK07937         72 GAVPPINESHVE---MDAAWALYEAWVKLLTGEVDTALVYGFG  111 (352)
T ss_pred             cCCCCCceEEec---CcHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence            663 2 333444   5788899999999999999965 55665

>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]

Probab=96.61  E-value=0.0085  Score=54.33  Aligned_cols=86  Identities=22%  Similarity=0.287  Sum_probs=66.4

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCce-EEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRC-GVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~-gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l  219 (263)
                      .-|+++|+.++|..+++++        .++ .|++|+..+..               ..          -..+..|+..|
T Consensus        52 vTmaveAA~~~l~r~~~D~--------~~Ig~v~vgTES~~d---------------~~----------K~~at~v~~~l   98 (377)
T COG3425          52 VTMAVEAARNALKRADIDP--------SKIGAVIVGSESGPD---------------AV----------KPTATIVAEAL   98 (377)
T ss_pred             HHHHHHHHHHHHhccCCCH--------HHCceEEEecCCCcc---------------cc----------cchHHHHHHHh
Confidence            5689999999999988774        455 57788864321               11          23477889999


Q ss_pred             CCCCcc--ccccccchHHHHHHHHHHHHHHhcccc-eEeeccC
Q 024765          220 GWTGPS--YSISTACASSNYSILNATSHIIKGDTV-SNSPSSQ  259 (263)
Q Consensus       220 gl~Gp~--~tv~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae  259 (263)
                      |+.--+  +-+--||-+++.||+.|..++.+|..+ .+|+|++
T Consensus        99 g~~~~~~~~d~~~AC~agT~aL~~a~~~v~s~~~~~~LvI~sD  141 (377)
T COG3425          99 GLNPSARAADVEFACYAGTAALQAAIGWVESGMISYGLVIGAD  141 (377)
T ss_pred             CCCCceehhhHHHHHHHHHHHHHHHHHHHHcCCccceEEEeeh
Confidence            997654  447789999999999999999999995 6677765

>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways

Probab=96.42  E-value=0.0036  Score=44.25  Aligned_cols=35  Identities=23%  Similarity=0.325  Sum_probs=28.0

Q ss_pred             ccccccchHHHHHHHHHHHHHHhcccc-eEeeccCC
Q 024765          226 YSISTACASSNYSILNATSHIIKGDTV-SNSPSSQA  260 (263)
Q Consensus       226 ~tv~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~  260 (263)
                      |-|..+|++.+.||++|..+|+.|.++ ++|+++|.
T Consensus         1 fDi~~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~   36 (80)
T PF08545_consen    1 FDINQACAGFLYALDVAAALIASGRAKNALVVGGDR   36 (80)
T ss_dssp             EEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEE
T ss_pred             CcccccchHHHHHHHHHHHHHhhccCCEEEEEeecc
Confidence            457899999999999999999999886 66777653

The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....

>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase

Probab=96.31  E-value=0.0088  Score=48.58  Aligned_cols=136  Identities=18%  Similarity=0.202  Sum_probs=81.6

Q ss_pred             CcEEEEecceeCCcC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHH
Q 024765           70 RRIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (263)
Q Consensus        70 ~~VaItG~g~~~p~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa  148 (263)
                      ++|-|.+|+..+|.- .+.+++-+.  .|.+.-    +|.. ++-..--++.+         +.|     -..-|++.++
T Consensus         3 ~~VGI~~i~~y~p~~~v~~~~La~~--~g~d~~----K~~~-glgq~~~av~~---------~~E-----D~vTmA~nAa   61 (174)
T PF01154_consen    3 QNVGIDAIEFYIPRYYVDQEELAEA--RGVDPG----KYTI-GLGQEKMAVPP---------PDE-----DIVTMAANAA   61 (174)
T ss_dssp             SSEEEEEEEEE-ESEEEEHHHHHHH--TTS-TC----HHHT-TT--SEEEE-----------TTS------HHHHHHHHH
T ss_pred             ccccEeEEEEecCceEecHHHHHHH--hCCCHH----Hhhh-hcCeeEEEeCC---------Ccc-----cHHHHHHHHH
Confidence            579999999999987 677776433  222210    1100 11111111111         111     1356899999


Q ss_pred             HHHHHHcCCCCcccCcCCCCceE-EEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCCCcc--
Q 024765          149 KKALVDAGITEQVSGELDKSRCG-VIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPS--  225 (263)
Q Consensus       149 ~~Al~dAGl~~~~~~~~~~~r~g-v~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~--  225 (263)
                      ...|++.++++        .++| +++|+..+               .+.          .-.++..|..+|++.|.+  
T Consensus        62 ~~ll~~~~id~--------~~Ig~l~vgTES~---------------vD~----------sKs~~t~v~~ll~~s~~~~~  108 (174)
T PF01154_consen   62 KPLLDRYNIDP--------DDIGRLIVGTESG---------------VDK----------SKSISTYVHQLLGLSGNPDC  108 (174)
T ss_dssp             HTTHHHHT-HH--------HHEEEEEEE-SS----------------SBS----------SS-HHHHHHHHTTTTT-SSS
T ss_pred             HHHHHHcCCCH--------HHccEEEEecccc---------------ccc----------cccHHHHHHHHhCcCCCCce
Confidence            99999987664        4555 55676532               111          123677899999997643  


Q ss_pred             --ccccccchHHHHHHHHHHHHHHhcccc---eEeeccC
Q 024765          226 --YSISTACASSNYSILNATSHIIKGDTV---SNSPSSQ  259 (263)
Q Consensus       226 --~tv~tACsSsl~Al~~A~~~Lr~G~~d---~~v~Gae  259 (263)
                        +-+-.||-++..||..|+.+|+++..|   .+|+++|
T Consensus       109 ~~~e~k~ACygGTaAL~~a~~~v~s~~~~g~~aLVVasD  147 (174)
T PF01154_consen  109 RGVEMKQACYGGTAALQNAVNWVASSPWDGRKALVVASD  147 (174)
T ss_dssp             EEEEEESGGGHHHHHHHHHHHHHCSTTSTTEEEEEEEEE
T ss_pred             eeeehhhhhHHHHHHHHHHHHHHhcCCCCCCeEEEEecc
Confidence              456889999999999999999998764   5566554

Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....

>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]

Probab=95.95  E-value=0.028  Score=49.55  Aligned_cols=87  Identities=14%  Similarity=0.263  Sum_probs=58.9

Q ss_pred             HHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh-CC
Q 024765          143 YALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL-GW  221 (263)
Q Consensus       143 l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l-gl  221 (263)
                      |+..+....+|+-+++|..+.       -|++|+...                        ++.  .....|++.++ |+
T Consensus        64 Ll~~vl~a~ie~t~~dp~~ig-------di~vG~vL~------------------------pg~--ga~e~R~a~~~ag~  110 (435)
T KOG1389|consen   64 LLAAVLRAVIEKTNLDPSLIG-------DIVVGTVLA------------------------PGS--GASECRMAAFYAGF  110 (435)
T ss_pred             HHHHHHHHHHhhcCCCHHHhc-------ceeeeeccC------------------------CCc--chHHHHHHHHHcCC
Confidence            345556677788888764322       266776531                        111  23345555444 55


Q ss_pred             --CCccccccccchHHHHHHHHHHHHHHhcccceEeeccCCCC
Q 024765          222 --TGPSYSISTACASSNYSILNATSHIIKGDTVSNSPSSQADI  262 (263)
Q Consensus       222 --~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~v~Gae~~i  262 (263)
                        .-|..+|+--|+|||+|+..=+..||.|..|+=+++.-..+
T Consensus       111 P~tvpv~tvNRqCsSGLqaVadiA~~Ir~G~ydIGla~GvESM  153 (435)
T KOG1389|consen  111 PETVPVRTVNRQCSSGLQAVADIAAKIRAGFYDIGLAAGVESM  153 (435)
T ss_pred             CcccchhhhhhhhhhHHHHHHHHHHHHhcCceeeecccchhhh
Confidence              44889999999999999999999999999998665444333

>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2

Probab=95.74  E-value=0.11  Score=44.23  Aligned_cols=93  Identities=19%  Similarity=0.091  Sum_probs=62.4

Q ss_pred             HhhcCHHHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHH
Q 024765          134 AKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASA  213 (263)
Q Consensus       134 ~~~~d~~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  213 (263)
                      ..+..-...|+.+++.+||+++|+++..++       .|++-+++|                          .....+-.
T Consensus        94 ~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIt-------hlv~vs~TG--------------------------~~~PglD~  140 (226)
T PF00195_consen   94 ALYAEEAPPLAEEAARKALAEAGLDPSDIT-------HLVTVSCTG--------------------------IAAPGLDA  140 (226)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTS-GGGEC-------EEEEEESSS--------------------------SECS-HHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCCcccc-------eEEEEecCC--------------------------cCCCchhH
Confidence            334455667899999999999999854322       455555532                          22334456


Q ss_pred             HHHHHhCCCCcc---ccccccchHHHHHHHHHHHHHHhccc-ceEeeccC
Q 024765          214 VLAMDLGWTGPS---YSISTACASSNYSILNATSHIIKGDT-VSNSPSSQ  259 (263)
Q Consensus       214 ~ia~~lgl~Gp~---~tv~tACsSsl~Al~~A~~~Lr~G~~-d~~v~Gae  259 (263)
                      +|...|||+.-.   ....-+|..|..+|..|.+..++..- .++|+..|
T Consensus       141 ~l~~~LgL~~~v~R~~i~~~GC~gg~~~L~~A~~~~~~~p~a~VLvv~vE  190 (226)
T PF00195_consen  141 RLINRLGLRPDVQRTPIFGMGCAGGAAGLRRAKDIARANPGARVLVVCVE  190 (226)
T ss_dssp             HHHHHHT--TTSEEEEEES-GGGHHHHHHHHHHHHHHHSTT-EEEEEEEE
T ss_pred             HHHhcCCCCCCcEEEEEeccchhhHHHHHHHHHHHHhCCccceEEEEEEE
Confidence            788999998643   45678999999999999998887655 45566665

3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....

>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]

Probab=94.74  E-value=0.055  Score=46.56  Aligned_cols=91  Identities=21%  Similarity=0.305  Sum_probs=60.9

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      +.|-..++..||..+++.++..+       -|++|.-.....                +..        .++.+|.-..|
T Consensus        29 TdL~~~AakAAL~aa~v~~e~VD-------~VI~GNV~aSSs----------------DgI--------Yl~RHvGL~~G   77 (396)
T KOG1391|consen   29 TDLGVVAAKAALKAANVGAEAVD-------HVIMGNVLASSS----------------DGI--------YLARHVGLRVG   77 (396)
T ss_pred             hhHHHHHHHHHHhhcCCChhhcc-------eEEEeeeeeccC----------------Cce--------EeeeccccccC
Confidence            44567788999999999865433       466665321000                000        11222222223


Q ss_pred             C--CCccccccccchHHHHHHHHHHHHHHhcccceEeeccCCCC
Q 024765          221 W--TGPSYSISTACASSNYSILNATSHIIKGDTVSNSPSSQADI  262 (263)
Q Consensus       221 l--~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~v~Gae~~i  262 (263)
                      +  .-|..+|+.-|.|+.++|-.+++.|.-|+..++++|....+
T Consensus        78 vP~e~pALtiNRLCGSGFQsiVNgaQ~I~vgea~ivL~GGtEnM  121 (396)
T KOG1391|consen   78 VPKETPALTINRLCGSGFQSIVNGAQEICVGEAEIVLCGGTENM  121 (396)
T ss_pred             CcCccCceeehhhhcccHHHHHhhHHHhhcCcceEEEecCcccc
Confidence            2  34889999999999999999999999999998887765443

>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long

Probab=94.42  E-value=0.18  Score=44.59  Aligned_cols=84  Identities=19%  Similarity=0.142  Sum_probs=57.5

Q ss_pred             HHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 024765          140 YLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (263)
Q Consensus       140 ~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l  219 (263)
                      ..+|+.+++..||+.+|+.++        ++-++++-..                         .  ...+.+++.+..|
T Consensus        51 E~~m~~~A~~~al~Ka~l~~~--------dId~~~aGDL-------------------------l--nQ~i~s~f~ar~l   95 (329)
T PF07451_consen   51 ESKMQKEAVELALKKAGLKKE--------DIDYLFAGDL-------------------------L--NQIISSSFAARDL   95 (329)
T ss_dssp             HHHHHHHHHHHHHHHTT--GG--------G-SEEEEEET-------------------------T--CCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCHH--------HCeEEEehhh-------------------------h--hhhHHHHHHHHhc
Confidence            368899999999999999854        3446666431                         1  1224455666666


Q ss_pred             CCCCccccccccchHHHHHHHHHHHHHHhcccceEeeccCC
Q 024765          220 GWTGPSYSISTACASSNYSILNATSHIIKGDTVSNSPSSQA  260 (263)
Q Consensus       220 gl~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~v~Gae~  260 (263)
                      ++  |-+=+-.|||+...+|.+|.-++..|-+|-+++++.+
T Consensus        96 ~i--Pf~GlygACST~~e~l~laa~~vdgg~a~~vla~tSS  134 (329)
T PF07451_consen   96 GI--PFLGLYGACSTMMESLALAAMLVDGGFADYVLAATSS  134 (329)
T ss_dssp             T----EEEB--CCCHHHHHHHHHHHHHHTTS-SEEEEEEEE
T ss_pred             CC--CccchhhHHHHHHHHHHHHHHHHhCCCcceEEEEecc
Confidence            54  6677899999999999999999999999998887653

This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.

>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]

Probab=93.88  E-value=0.024  Score=49.48  Aligned_cols=51  Identities=20%  Similarity=0.274  Sum_probs=42.3

Q ss_pred             HHHHHHHHHhCC--CCccccccccchHHHHHHHHHHHHHHhcccceEeeccCC
Q 024765          210 MASAVLAMDLGW--TGPSYSISTACASSNYSILNATSHIIKGDTVSNSPSSQA  260 (263)
Q Consensus       210 ~~a~~ia~~lgl--~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~v~Gae~  260 (263)
                      .+|...+-.-|+  +-|..||.-||-|+.+|+..++-+|..|.||++|+|...
T Consensus       104 niareaal~agfsdktpahtvtmacissn~amttgmgliatg~~dvivaggve  156 (465)
T KOG1392|consen  104 NIAREAALLAGFSDKTPAHTVTMACISSNVAMTTGMGLIATGNADVIVAGGVE  156 (465)
T ss_pred             hHHHHHHHhcCCCCCCccceeeeehhccchhhhccceeEeeCCcCEEEEccee
Confidence            445555555566  559999999999999999999999999999999887643

>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=90.37  E-value=1.3  Score=39.30  Aligned_cols=91  Identities=14%  Similarity=0.097  Sum_probs=63.1

Q ss_pred             hcCHHHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHH
Q 024765          136 KADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVL  215 (263)
Q Consensus       136 ~~d~~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i  215 (263)
                      ++.....+..++.++||+++++.+++++       .|++.+++|                          .....+=.+|
T Consensus        72 fie~a~~l~v~a~r~aL~~~~l~pedId-------~vv~vtsTG--------------------------~~~Ps~dari  118 (356)
T COG3424          72 FIEEAVPLGVDALRRALDGSPLRPEDID-------AVVTVTSTG--------------------------LATPSLDARI  118 (356)
T ss_pred             HHHHHHHHHHHHHHHHhccCCCCHHHCc-------EEEEEeecc--------------------------ccCCChhHHH
Confidence            3445567899999999999999865433       345555432                          2222334577


Q ss_pred             HHHhCCCCcc---ccccccchHHHHHHHHHHHHHHhc-ccceEeeccC
Q 024765          216 AMDLGWTGPS---YSISTACASSNYSILNATSHIIKG-DTVSNSPSSQ  259 (263)
Q Consensus       216 a~~lgl~Gp~---~tv~tACsSsl~Al~~A~~~Lr~G-~~d~~v~Gae  259 (263)
                      ...|||.-..   -.-.-+|+.+..+|..|.+..|.+ +..++|+.+|
T Consensus       119 ~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~ra~P~~~vlvV~vE  166 (356)
T COG3424         119 VGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAPDANVLVVCVE  166 (356)
T ss_pred             HhhcCCCCccceeeeecchhhhhhhHHHHHHHHHhhCccceEEEEEee
Confidence            7888886432   234568999999999999999999 4456666666

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	263
1j3n_A	408	Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protei		3e-31
1e5m_A	416	Beta Ketoacyl Acyl Carrier Protein Synthase Ii (Kas		5e-27
2gqd_A	437	The Crystal Structure Of B-Ketoacyl-Acp Synthase Ii		2e-24
2alm_A	431	Crystal Structure Analysis Of A Mutant Beta-Ketoacy		3e-23
1ox0_A	430	The Crystal Structure Of Beta-Ketoacyl-[acyl Carrie		3e-23
3o04_A	413	Crystal Structure Of The Beta-Keto-Acyl Carrier Pro		2e-22
2rjt_A	428	Crystal Structure Analysis Of A Surface Entropy Red		2e-22
2gfw_A	427	Structure Of Wild Type E. Coli Fabf (Kasii) Length		2e-20
2gfy_A	427	Structure Of E. Coli Fabf(K335a) Mutant With Covale		2e-20
1b3n_A	412	Beta-Ketoacyl Carrier Protein Synthase As A Drug Ta		2e-20
3hnz_A	427	Structure Of E. Coli Fabf(C163a) In Complex With Pl		2e-19
2gfv_A	427	Structure Of E. Coli Fabf (Kasii) C163q Mutant Leng		4e-19
2iwy_A	438	Human Mitochondrial Beta-ketoacyl Acp Synthase Leng		3e-18
2c9h_A	444	Structure Of Mitochondrial Beta-Ketoacyl Synthase L		5e-17
2byw_A	418	Structure Of Escherichia Coli Beta-Ketoacyl (Acyl C		8e-16
1dd8_A	406	Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Pr		8e-16
3lrf_A	428	Crystal Structure Of Beta-Ketoacyl Synthase From Br		9e-16
3u0f_A	411	The Structure Of Beta-Ketoacyl Synthase From Brucel		1e-15
1h4f_A	406	E. Coli Beta-Ketoacyl [acyl Carrier Protein] Syntha		3e-15
2byz_A	418	Structure Of E. Coli Kas I H298q Mutant In Complex		3e-15
1fj4_A	406	The Structure Of Beta-Ketoacyl-[acyl Carrier Protei		3e-15
2byy_A	418	E. Coli Kas I H298e Mutation Length = 418		3e-15
3kzu_A	428	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		4e-15
1w0i_A	431	Arabidopsis Thaliana Mitochondrial Kas Length = 431		7e-14
3e60_A	424	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		1e-13
4ddo_A	451	Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protei		3e-13
4f32_A	451	Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protei		6e-12
1tqy_A	424	The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Le		1e-11
1f91_A	406	Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In		4e-11
1ek4_A	418	Beta-Ketoacyl [acyl Carrier Protein] Synthase I In		5e-11
2vb7_C	406	Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Ap		1e-10
3oyt_A	410	1.84 Angstrom Resolution Crystal Structure Of 3-Oxo		2e-08
1tqy_B	415	The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Le		1e-06
4ewg_A	412	Crystal Structure Of A Beta-Ketoacyl Synthase From		9e-06
2wgd_A	416	Crystal Structure Of Kasa Of Mycobacterium Tubercul		2e-05
2wgf_A	416	Crystal Structure Of Mycobacterium Tuberculosis C17		4e-04

>pdb|1J3N|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protein) Synthase Ii From Thermus Thermophilus Hb8 Length = 408

Iteration: 1
 Score =  132 bits (331), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 72/186 (38%), Positives = 113/186 (60%), Gaps = 13/186 (6%)
Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           RR+VVTGLGA+TP+G     FH + L G +G+  I  FD S  P RIAAE+  +  G ++
Sbjct: 2   RRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPITRFDASALPVRIAAEV-DVDPGAYL 60
Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K  ++ D+++ YAL+A + AL DAG+  +   +LD  R G ++G+ +GG+      +E
Sbjct: 61  DRKELRRLDRFVQYALIAAQLALEDAGLKPE---DLDPERVGTLVGTGIGGMET----WE 113
Query: 190 A-----IKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATS 244
           A     ++    ++SPF+IP  + NMASA +AM  G+TGPS ++ TACA+   ++ +A  
Sbjct: 114 AQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSSTVVTACATGADALGSALR 173
Query: 245 HIIKGD 250
            I  G+
Sbjct: 174 MIQLGE 179

>pdb|1E5M|A Chain A, Beta Ketoacyl Acyl Carrier Protein Synthase Ii (Kasii) From Synechocystis Sp Length = 416

Iteration: 1
 Score =  117 bits (294), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 66/183 (36%), Positives = 105/183 (57%), Gaps = 4/183 (2%)
Query: 68  KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG 127
           +++R+VVTGLGA+TP+G+    +   L+EG  GI  I  FD S+   R   E+K      
Sbjct: 5   EKKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDATQ 64
Query: 128 WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDG 187
           ++  K AK+ D++  +A+ A ++A+ DA +   V  EL+    GV+IG+ +GGL+VL D 
Sbjct: 65  FLDRKEAKRMDRFCHFAVCASQQAINDAKL---VINELNADEIGVLIGTGIGGLKVLEDQ 121
Query: 188 FEA-IKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHI 246
               +     + SPF IP  + NMAS + A++LG  GP+    TACA+ + +I +A   +
Sbjct: 122 QTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGSNAIGDAFRLV 181
Query: 247 IKG 249
             G
Sbjct: 182 QNG 184

>pdb|2GQD|A Chain A, The Crystal Structure Of B-Ketoacyl-Acp Synthase Ii (Fabf) From Staphylococcus Aureus Length = 437

Iteration: 1
 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 104/184 (56%), Gaps = 4/184 (2%)
Query: 68  KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG 127
           + +R+V+TG+GA++P+G+D      + L+GV GI  I   D   +   +A E+K+ +   
Sbjct: 26  QNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIED 85
Query: 128 WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDG 187
            I  K A++ D++  YA+VA ++A+ DA +      E    R GV IGS +GG+      
Sbjct: 86  HIDKKEARRMDRFTQYAIVAAREAVKDAQLDIN---ENTADRIGVWIGSGIGGMETFEIA 142
Query: 188 F-EAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHI 246
             + +    +++SPF++P  + +MA+  +++DLG  GP+ +  TACA+   SI  A   +
Sbjct: 143 HKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIV 202
Query: 247 IKGD 250
            +GD
Sbjct: 203 QRGD 206

>pdb|2ALM|A Chain A, Crystal Structure Analysis Of A Mutant Beta-Ketoacyl-[acyl Carrier Protein] Synthase Ii From Streptococcus Pneumoniae Length = 431

Iteration: 1
 Score =  105 bits (261), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 65/182 (35%), Positives = 99/182 (54%), Gaps = 8/182 (4%)
Query: 68  KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG 127
           K  R+VVTG G  +P+G+    F  SL  G  GI  I  FD S+F    AAEI+      
Sbjct: 22  KLNRVVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGITKFDHSDFDVHNAAEIQDFPFDK 81
Query: 128 WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDG 187
           +   K   + D Y +YAL A ++A+  A +  +    L++ R GVI+ S +GG++ + D 
Sbjct: 82  YFVKKDTNRFDNYSLYALYAAQEAVNHANLDVEA---LNRDRFGVIVASGIGGIKEIED- 137
Query: 188 FEAIKVSY---KKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATS 244
            + +++     K++ P  +P +L NMAS  +AM  G  G   SI+TAC+SSN +I +A  
Sbjct: 138 -QVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVCKSINTACSSSNDAIGDAFR 196
Query: 245 HI 246
            I
Sbjct: 197 SI 198

>pdb|1OX0|A Chain A, The Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase Ii From Streptococcus Pneumoniae Length = 430

Iteration: 1
 Score =  105 bits (261), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 65/182 (35%), Positives = 99/182 (54%), Gaps = 8/182 (4%)
Query: 68  KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG 127
           K  R+VVTG G  +P+G+    F  SL  G  GI  I  FD S+F    AAEI+      
Sbjct: 21  KLNRVVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGITKFDHSDFDVHNAAEIQDFPFDK 80
Query: 128 WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDG 187
           +   K   + D Y +YAL A ++A+  A +  +    L++ R GVI+ S +GG++ + D 
Sbjct: 81  YFVKKDTNRFDNYSLYALYAAQEAVNHANLDVEA---LNRDRFGVIVASGIGGIKEIED- 136
Query: 188 FEAIKVSY---KKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATS 244
            + +++     K++ P  +P +L NMAS  +AM  G  G   SI+TAC+SSN +I +A  
Sbjct: 137 -QVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVCKSINTACSSSNDAIGDAFR 195
Query: 245 HI 246
            I
Sbjct: 196 SI 197

>pdb|3O04|A Chain A, Crystal Structure Of The Beta-Keto-Acyl Carrier Protein Synthase Ii (Lmo2201) From Listeria Monocytogenes Length = 413

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 107/183 (58%), Gaps = 4/183 (2%)
Query: 69  ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
           +RR+VVTG+GAVTP+G+DA     +  +GV G++     +  +FP +IAAE+K      +
Sbjct: 3   KRRVVVTGIGAVTPIGNDAETSWENAKKGVNGVAKXTRLNPDDFPVKIAAELKDFDVEKY 62
Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGF 188
           +  K A+K D++  YA+ + + A+ D+G+   V  + + +R GV IGS +GG       +
Sbjct: 63  LEKKEARKXDRFTHYAIASAEXAVQDSGL---VIDDSNANRVGVWIGSGIGGXETFETQY 119
Query: 189 EA-IKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
           E  +   ++++SPF++P  + +  S  +++  G  G + +  TACA++  SI +A   I 
Sbjct: 120 EIFLNRGHRRVSPFFVPXXIPDXGSGQVSIRFGAKGINSTTVTACATATNSIGDAFKVIE 179
Query: 248 KGD 250
           +GD
Sbjct: 180 RGD 182

>pdb|2RJT|A Chain A, Crystal Structure Analysis Of A Surface Entropy Reduction Mutant Of S. Pneumoniae Fabf Length = 428

Iteration: 1
 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 101/190 (53%), Gaps = 8/190 (4%)
Query: 60  IITKHKEPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAE 119
           ++ +    K  R+VVTG G  +P+G+    F  SL  G  GI  I  FD S+F    AAE
Sbjct: 13  LVPRGSHMKLNRVVVTGYGVTSPIGNTPAEFWNSLATGKIGIGGITKFDHSDFDVHNAAE 72
Query: 120 IKSLSTGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMG 179
           I+      +   K   + D Y +YAL A ++A+  A +       L++ R GVI+ S +G
Sbjct: 73  IQDFPFDKYFVKKDTNRFDNYSLYALYAAQEAVNHANLDVAA---LNRDRFGVIVASGIG 129
Query: 180 GLRVLNDGFEAIKVSY---KKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSN 236
           G++ + D  + +++     K++ P  +P +L NMAS  +AM  G  G   SI+TAC+SSN
Sbjct: 130 GIKEIED--QVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVCKSINTACSSSN 187
Query: 237 YSILNATSHI 246
            +I +A   I
Sbjct: 188 DAIGDAFRSI 197

>pdb|2GFW|A Chain A, Structure Of Wild Type E. Coli Fabf (Kasii) Length = 427

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/185 (37%), Positives = 109/185 (58%), Gaps = 8/185 (4%)
Query: 69  ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
           +RR+VVTGLG ++P+G+       +LL G +GIS I  FD S + T+ A  +K  +    
Sbjct: 17  KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDI 76
Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAG--ITEQVSGELDKSRCGVIIGSAMGGLRVLND 186
           IS K  +K D ++ Y +VAG +A+ D+G  ITE+     + +R G  IGS +GGL ++ +
Sbjct: 77  ISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEE-----NATRIGAAIGSGIGGLGLIEE 131
Query: 187 GFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSH 245
              ++     +K+SPF++P ++ NM +  L +  G  GPS SI+TAC S  ++I +A   
Sbjct: 132 NHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGHAARI 191
Query: 246 IIKGD 250
           I  GD
Sbjct: 192 IAYGD 196

>pdb|2GFY|A Chain A, Structure Of E. Coli Fabf(K335a) Mutant With Covalently Linked Dodecanoic Acid Length = 427

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/185 (37%), Positives = 109/185 (58%), Gaps = 8/185 (4%)
Query: 69  ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
           +RR+VVTGLG ++P+G+       +LL G +GIS I  FD S + T+ A  +K  +    
Sbjct: 17  KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDI 76
Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAG--ITEQVSGELDKSRCGVIIGSAMGGLRVLND 186
           IS K  +K D ++ Y +VAG +A+ D+G  ITE+     + +R G  IGS +GGL ++ +
Sbjct: 77  ISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEE-----NATRIGAAIGSGIGGLGLIEE 131
Query: 187 GFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSH 245
              ++     +K+SPF++P ++ NM +  L +  G  GPS SI+TAC S  ++I +A   
Sbjct: 132 NHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGHAARI 191
Query: 246 IIKGD 250
           I  GD
Sbjct: 192 IAYGD 196

>pdb|1B3N|A Chain A, Beta-Ketoacyl Carrier Protein Synthase As A Drug Target, Implications From The Crystal Structure Of A Complex With The Inhibitor Cerulenin. Length = 412

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/185 (37%), Positives = 109/185 (58%), Gaps = 8/185 (4%)
Query: 69  ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
           +RR+VVTGLG ++P+G+       +LL G +GIS I  FD S + T+ A  +K  +    
Sbjct: 2   KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDI 61
Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAG--ITEQVSGELDKSRCGVIIGSAMGGLRVLND 186
           IS K  +K D ++ Y +VAG +A+ D+G  ITE+     + +R G  IGS +GGL ++ +
Sbjct: 62  ISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEE-----NATRIGAAIGSGIGGLGLIEE 116
Query: 187 GFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSH 245
              ++     +K+SPF++P ++ NM +  L +  G  GPS SI+TAC S  ++I +A   
Sbjct: 117 NHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGHAARI 176
Query: 246 IIKGD 250
           I  GD
Sbjct: 177 IAYGD 181

>pdb|3HNZ|A Chain A, Structure Of E. Coli Fabf(C163a) In Complex With Platensimycin Length = 427

Iteration: 1
 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/185 (36%), Positives = 108/185 (58%), Gaps = 8/185 (4%)
Query: 69  ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
           +RR+VVTGLG ++P+G+       +LL G +GIS I  FD S + T+ A  +K  +    
Sbjct: 17  KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDI 76
Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAG--ITEQVSGELDKSRCGVIIGSAMGGLRVLND 186
           IS K  +K D ++ Y +VAG +A+ D+G  ITE+     + +R G  IGS +GGL ++ +
Sbjct: 77  ISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEE-----NATRIGAAIGSGIGGLGLIEE 131
Query: 187 GFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSH 245
              ++     +K+SPF++P ++ NM +  L +  G  GPS SI+TA  S  ++I +A   
Sbjct: 132 NHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATAATSGVHNIGHAARI 191
Query: 246 IIKGD 250
           I  GD
Sbjct: 192 IAYGD 196

>pdb|2GFV|A Chain A, Structure Of E. Coli Fabf (Kasii) C163q Mutant Length = 427

Iteration: 1
 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/185 (36%), Positives = 108/185 (58%), Gaps = 8/185 (4%)
Query: 69  ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
           +RR+VVTGLG ++P+G+       +LL G +GIS I  FD S + T+ A  +K  +    
Sbjct: 17  KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDI 76
Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAG--ITEQVSGELDKSRCGVIIGSAMGGLRVLND 186
           IS K  +K D ++ Y +VAG +A+ D+G  ITE+     + +R G  IGS +GGL ++ +
Sbjct: 77  ISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEE-----NATRIGAAIGSGIGGLGLIEE 131
Query: 187 GFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSH 245
              ++     +K+SPF++P ++ NM +  L +  G  GPS SI+TA  S  ++I +A   
Sbjct: 132 NHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATAQTSGVHNIGHAARI 191
Query: 246 IIKGD 250
           I  GD
Sbjct: 192 IAYGD 196

>pdb|2IWY|A Chain A, Human Mitochondrial Beta-ketoacyl Acp Synthase Length = 438

Iteration: 1
 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 97/189 (51%), Gaps = 9/189 (4%)
Query: 69  ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG- 127
            RR+V+TG+G VTPLG   HL    L+ G +GI  + G +    P  +AA +   S  G 
Sbjct: 20  HRRVVITGIGLVTPLGVGTHLVWDRLIGGESGIVSLVGEEYKSIPCSVAAYVPRGSDEGQ 79
Query: 128 -----WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLR 182
                ++S    K      I A+ A + A+ D+G   Q   E D+   GV IG  M  L 
Sbjct: 80  FNEQNFVSKSDIKSMSSPTIMAIGAAELAMKDSGWHPQ--SEADQVATGVAIGMGMIPLE 137
Query: 183 VLNDGFEAIKV-SYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILN 241
           V+++     +   Y K+SPF++P  L NMA+  +++     GP++++STAC +  +++ +
Sbjct: 138 VVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYKLKGPNHAVSTACTTGAHAVGD 197
Query: 242 ATSHIIKGD 250
           +   I  GD
Sbjct: 198 SFRFIAHGD 206

>pdb|2C9H|A Chain A, Structure Of Mitochondrial Beta-Ketoacyl Synthase Length = 444

Iteration: 1
 Score = 84.7 bits (208), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 96/189 (50%), Gaps = 9/189 (4%)
Query: 69  ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG- 127
            RR+V+TG+G VTPLG   HL    L+ G +GI  + G +    P  +AA +   S  G 
Sbjct: 26  HRRVVITGIGLVTPLGVGTHLVWDRLIGGESGIVSLVGEEYKSIPCSVAAYVPRGSDEGQ 85
Query: 128 -----WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLR 182
                ++S    K      I A+ A + A+ D+G   Q   E D+   GV IG  M  L 
Sbjct: 86  FNEQNFVSKSDIKSMSSPTIMAIGAAELAMKDSGWHPQ--SEADQVATGVAIGMGMIPLE 143
Query: 183 VLNDGFEAIKV-SYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILN 241
           V+++     +   Y K+SPF++P  L NMA+  +++     GP++++STA  +  +++ +
Sbjct: 144 VVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYKLKGPNHAVSTAXTTGAHAVGD 203
Query: 242 ATSHIIKGD 250
           +   I  GD
Sbjct: 204 SFRFIAHGD 212

>pdb|2BYW|A Chain A, Structure Of Escherichia Coli Beta-Ketoacyl (Acyl Carrier Protein) Synthase I Lys328ala Mutant Length = 418

Iteration: 1
 Score = 80.5 bits (197), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 95/182 (52%), Gaps = 5/182 (2%)
Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           +R+V+TGLG V+ +G++      SL EG +GI+  Q    S   + +   +K L T G I
Sbjct: 14  KRVVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGLI 72
Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K+ +      IYA ++ ++A+ DAG++ +     +  R G+I GS  G  R    G +
Sbjct: 73  DRKVVRFMSDASIYAFLSMEQAIADAGLSPEAY--QNNPRVGLIAGSGGGSPRFQVFGAD 130
Query: 190 AIK--VSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
           A++     K + P+ +  ++ +  SA LA      G +YSIS+ACA+S + I NA   I 
Sbjct: 131 AMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQ 190
Query: 248 KG 249
            G
Sbjct: 191 LG 192

>pdb|1DD8|A Chain A, Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase I From Escherichia Coli Length = 406

Iteration: 1
 Score = 80.5 bits (197), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 95/182 (52%), Gaps = 5/182 (2%)
Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           +R+V+TGLG V+ +G++      SL EG +GI+  Q    S   + +   +K L T G I
Sbjct: 2   KRVVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGLI 60
Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K+ +      IYA ++ ++A+ DAG++ +     +  R G+I GS  G  R    G +
Sbjct: 61  DRKVVRFMSDASIYAFLSMEQAIADAGLSPEAY--QNNPRVGLIAGSGGGSPRFQVFGAD 118
Query: 190 AIK--VSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
           A++     K + P+ +  ++ +  SA LA      G +YSIS+ACA+S + I NA   I 
Sbjct: 119 AMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQ 178
Query: 248 KG 249
            G
Sbjct: 179 LG 180

>pdb|3LRF|A Chain A, Crystal Structure Of Beta-Ketoacyl Synthase From Brucella Melitensis Length = 428

Iteration: 1
 Score = 80.5 bits (197), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 97/186 (52%), Gaps = 15/186 (8%)
Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQ-----GFDCSEFPTRIAAEIKSLS 124
           RR+VVTG+G V+ +G +      SL E  +GIS  +     GF C +       +I+SL 
Sbjct: 23  RRVVVTGMGIVSSIGSNTEEVTASLREAKSGISRAEEYAELGFRC-QVHGAPDIDIESL- 80
Query: 125 TGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVL 184
               +  +  +   +   +  +A  +A+ DAG+TE+   E+   R G+I+GS     R +
Sbjct: 81  ----VDRRAMRFHGRGTAWNHIAMDQAIADAGLTEE---EVSNERTGIIMGSGGPSTRTI 133
Query: 185 NDGFEAIKVSY-KKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNAT 243
            D  +  +    K++ PF +P ++++ ASA LA      G +YSIS+ACA+SN+ I NA 
Sbjct: 134 VDSADITREKGPKRVGPFAVPKAMSSTASATLATFFKIKGINYSISSACATSNHCIGNAY 193
Query: 244 SHIIKG 249
             I  G
Sbjct: 194 EMIQYG 199

>pdb|3U0F|A Chain A, The Structure Of Beta-Ketoacyl Synthase From Brucella Melitensis Bound To The Fragment 7-Hydroxycoumarin Length = 411

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 97/186 (52%), Gaps = 15/186 (8%)
Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQ-----GFDCSEFPTRIAAEIKSLS 124
           RR+VVTG+G V+ +G +      SL E  +GIS  +     GF C +       +I+SL 
Sbjct: 6   RRVVVTGMGIVSSIGSNTEEVTASLREAKSGISRAEEYAELGFRC-QVHGAPDIDIESL- 63
Query: 125 TGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVL 184
               +  +  +   +   +  +A  +A+ DAG+TE+   E+   R G+I+GS     R +
Sbjct: 64  ----VDRRAMRFHGRGTAWNHIAMDQAIADAGLTEE---EVSNERTGIIMGSGGPSTRTI 116
Query: 185 NDGFEAIKVSY-KKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNAT 243
            D  +  +    K++ PF +P ++++ ASA LA      G +YSIS+ACA+SN+ I NA 
Sbjct: 117 VDSADITREKGPKRVGPFAVPKAMSSTASATLATFFKIKGINYSISSACATSNHCIGNAY 176
Query: 244 SHIIKG 249
             I  G
Sbjct: 177 EMIQYG 182

>pdb|1H4F|A Chain A, E. Coli Beta-Ketoacyl [acyl Carrier Protein] Synthase I K328r Length = 406

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 94/182 (51%), Gaps = 5/182 (2%)
Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           +R V+TGLG V+ +G++      SL EG +GI+  Q    S   + +   +K L T G I
Sbjct: 2   KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGLI 60
Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K+ +      IYA ++ ++A+ DAG++ +     +  R G+I GS  G  R    G +
Sbjct: 61  DRKVVRFMSDASIYAFLSMEQAIADAGLSPEAY--QNNPRVGLIAGSGGGSPRFQVFGAD 118
Query: 190 AIK--VSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
           A++     K + P+ +  ++ +  SA LA      G +YSIS+ACA+S + I NA   I 
Sbjct: 119 AMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQ 178
Query: 248 KG 249
            G
Sbjct: 179 LG 180

>pdb|2BYZ|A Chain A, Structure Of E. Coli Kas I H298q Mutant In Complex With C12 Fatty Acid Length = 418

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 94/182 (51%), Gaps = 5/182 (2%)
Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           +R V+TGLG V+ +G++      SL EG +GI+  Q    S   + +   +K L T G I
Sbjct: 14  KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGLI 72
Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K+ +      IYA ++ ++A+ DAG++ +     +  R G+I GS  G  R    G +
Sbjct: 73  DRKVVRFMSDASIYAFLSMEQAIADAGLSPEAY--QNNPRVGLIAGSGGGSPRFQVFGAD 130
Query: 190 AIK--VSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
           A++     K + P+ +  ++ +  SA LA      G +YSIS+ACA+S + I NA   I 
Sbjct: 131 AMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQ 190
Query: 248 KG 249
            G
Sbjct: 191 LG 192

>pdb|1FJ4|A Chain A, The Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase I In Complex With Thiolactomycin, Implications For Drug Design Length = 406

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 94/182 (51%), Gaps = 5/182 (2%)
Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           +R V+TGLG V+ +G++      SL EG +GI+  Q    S   + +   +K L T G I
Sbjct: 2   KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGLI 60
Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K+ +      IYA ++ ++A+ DAG++ +     +  R G+I GS  G  R    G +
Sbjct: 61  DRKVVRFMSDASIYAFLSMEQAIADAGLSPEAY--QNNPRVGLIAGSGGGSPRFQVFGAD 118
Query: 190 AIK--VSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
           A++     K + P+ +  ++ +  SA LA      G +YSIS+ACA+S + I NA   I 
Sbjct: 119 AMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQ 178
Query: 248 KG 249
            G
Sbjct: 179 LG 180

>pdb|2BYY|A Chain A, E. Coli Kas I H298e Mutation Length = 418

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 94/182 (51%), Gaps = 5/182 (2%)
Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           +R V+TGLG V+ +G++      SL EG +GI+  Q    S   + +   +K L T G I
Sbjct: 14  KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGLI 72
Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K+ +      IYA ++ ++A+ DAG++ +     +  R G+I GS  G  R    G +
Sbjct: 73  DRKVVRFMSDASIYAFLSMEQAIADAGLSPEAY--QNNPRVGLIAGSGGGSPRFQVFGAD 130
Query: 190 AIK--VSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
           A++     K + P+ +  ++ +  SA LA      G +YSIS+ACA+S + I NA   I 
Sbjct: 131 AMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQ 190
Query: 248 KG 249
            G
Sbjct: 191 LG 192

>pdb|3KZU|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Ii From Brucella Melitensis Length = 428

Iteration: 1
 Score = 78.6 bits (192), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 61/189 (32%), Positives = 102/189 (53%), Gaps = 10/189 (5%)
Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIK-------S 122
           RR+V+TGLG V+PL          LL G +G   +  F+  +   +IA  I        +
Sbjct: 10  RRVVITGLGLVSPLASGVEETWKRLLAGESGARRVTEFEVDDLACQIACRIPVGDGTNGT 69
Query: 123 LSTGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLR 182
            +    + PK  +K D +++YA+ A  +AL DAG   +   + D+ R GV+IGS +GG+ 
Sbjct: 70  FNPDLHMDPKEQRKVDPFIVYAVGAADQALDDAGWHPE--NDEDQVRTGVLIGSGIGGIE 127
Query: 183 VLND-GFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILN 241
            + + G+       +++SPF+IP  L N+AS  +++     GP++S+ TACA+  ++I +
Sbjct: 128 GIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSIKHKLRGPNHSVVTACATGTHAIGD 187
Query: 242 ATSHIIKGD 250
           A   I  GD
Sbjct: 188 AARLIAFGD 196

>pdb|1W0I|A Chain A, Arabidopsis Thaliana Mitochondrial Kas Length = 431

Iteration: 1
 Score = 74.3 bits (181), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 104/202 (51%), Gaps = 26/202 (12%)
Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDI-------QGFD-------CSEFPTR 115
           RR+VVTGLG VTPLG         L++G  GI  +       + FD         +  ++
Sbjct: 1   RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSK 60
Query: 116 IAAEIKSLSTGG------WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSR 169
           +AA +   S  G      W++   +K    ++ YA+ A  +AL DA      + E +K R
Sbjct: 61  VAAFVPYGSNPGEFDEALWLN---SKAVANFIGYAVCAADEALRDAEWLP--TEEEEKER 115
Query: 170 CGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSI 228
            GV IG  +G +  + +  + I +   +++SPF+IP  L NMAS  ++M  G+ GP+++ 
Sbjct: 116 TGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAA 175
Query: 229 STACASSNYSILNATSHIIKGD 250
            TACA+  +SI +AT  I  GD
Sbjct: 176 VTACATGAHSIGDATRMIQFGD 197

>pdb|3E60|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Ii From Bartonella Henselae Length = 424

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 97/188 (51%), Gaps = 8/188 (4%)
Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIK-------S 122
           RR+V+TGLG V+PL  D       LLEG +G+  I  FD S+   +IAA I        +
Sbjct: 6   RRVVITGLGLVSPLAGDVEYSWKRLLEGKSGVRRITEFDVSDLSCQIAARIPVGDGTNGT 65
Query: 123 LSTGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLR 182
            +    +  K  +K D +++YA+ A  +AL DA    + S E       +I     G   
Sbjct: 66  YNADLHMESKEQRKVDAFIVYAIAAADQALADAEWFPK-SDEDQICTGVLIGSGIGGIEG 124
Query: 183 VLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNA 242
           ++  G+       +++SPF+IP  L N+AS  +++  G  GP++S+ TAC++  ++I +A
Sbjct: 125 IVEAGYTLRDKGPRRISPFFIPGRLINLASGYVSIKYGLRGPNHSVVTACSTGAHAIGDA 184
Query: 243 TSHIIKGD 250
              I  GD
Sbjct: 185 ARLIALGD 192

>pdb|4DDO|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Synthase Ii From Burkholderia Vietnamiensis Length = 451

Iteration: 1
 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 99/192 (51%), Gaps = 17/192 (8%)
Query: 71  RIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLST---GG 127
           R+VVTG+G V+PLG    L    L+ G +G+  +      E   ++   ++ ++    GG
Sbjct: 25  RVVVTGIGIVSPLGCGKELVWQRLIGGGSGLRRLGDDIAGELSAKVGGTVQDVAEDPEGG 84
Query: 128 W-----ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLR 182
           +     +  K  +K D+++  A+VA  +AL +AG   +   E  + R   ++ S +GG  
Sbjct: 85  FDPERSVPHKELRKMDRFIQMAMVAADEALAEAGWAPEA--EQQRERTATVVASGIGGFP 142
Query: 183 VLNDGFEAIKVS----YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYS 238
            L    EA+++      +++SPF IP+ L+N+A+  +++   + GP     TACA+S  +
Sbjct: 143 GLA---EAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIKHRFRGPLGCPVTACAASVQA 199
Query: 239 ILNATSHIIKGD 250
           I +A   I  G+
Sbjct: 200 IGDAMRMIRTGE 211

>pdb|4F32|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Synthase Ii From Burkholderia Vietnamiensis In Complex With Platencin Length = 451

Iteration: 1
 Score = 67.8 bits (164), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 98/192 (51%), Gaps = 17/192 (8%)
Query: 71  RIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLST---GG 127
           R+VVTG+G V+PLG    L    L+ G +G+  +      E   ++   ++ ++    GG
Sbjct: 25  RVVVTGIGIVSPLGCGKELVWQRLIGGGSGLRRLGDDIAGELSAKVGGTVQDVAEDPEGG 84
Query: 128 W-----ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLR 182
           +     +  K  +K D+++  A+VA  +AL +AG   +   E  + R   ++ S +GG  
Sbjct: 85  FDPERSVPHKELRKMDRFIQMAMVAADEALAEAGWAPEA--EQQRERTATVVASGIGGFP 142
Query: 183 VLNDGFEAIKVS----YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYS 238
            L    EA+++      +++SPF IP+ L+N+A+  +++   + GP     TA A+S  +
Sbjct: 143 GLA---EAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIKHRFRGPLGCPVTAXAASVQA 199
Query: 239 ILNATSHIIKGD 250
           I +A   I  G+
Sbjct: 200 IGDAMRMIRTGE 211

>pdb|1TQY|A Chain A, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Length = 424

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 10/188 (5%)
Query: 69  ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
           +RR+V+TG+G   P G+    F   L  G T    I  FD S + +++AAE         
Sbjct: 2   KRRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQVAAEADFDPVAEG 61
Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLR------ 182
             P+   + D+   +A+   ++A   +G+       LD +R GV +GSA+          
Sbjct: 62  FGPRELDRMDRASQFAVACAREAFAASGLDPDT---LDPARVGVSLGSAVAAATSLEREY 118
Query: 183 -VLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILN 241
            +L+D     +V    +S     Y + ++  A +A  +G  GP   +ST C S   S+ N
Sbjct: 119 LLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAEGPVTMVSTGCTSGLDSVGN 178
Query: 242 ATSHIIKG 249
           A   I +G
Sbjct: 179 AVRAIEEG 186

>pdb|1F91|A Chain A, Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In Complex With C10 Fatty Acid Substrate Length = 406

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 94/182 (51%), Gaps = 5/182 (2%)
Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           +R+V+TGLG V+ +G++      SL EG +GI+  Q    S   + +   +K L T G I
Sbjct: 2   KRVVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGLI 60
Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K+ +      IYA ++ ++A+ DAG++ +     +  R G+I GS  G  R    G +
Sbjct: 61  DRKVVRFMSDASIYAFLSMEQAIADAGLSPEAY--QNNPRVGLIAGSGGGSPRFQVFGAD 118
Query: 190 AIK--VSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
           A++     K + P+ +  ++ +  SA LA      G +YSIS+A A+S + I NA   I 
Sbjct: 119 AMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSASATSAHCIGNAVEQIQ 178
Query: 248 KG 249
            G
Sbjct: 179 LG 180

>pdb|1EK4|A Chain A, Beta-Ketoacyl [acyl Carrier Protein] Synthase I In Complex With Dodecanoic Acid To 1.85 Resolution Length = 418

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 94/182 (51%), Gaps = 5/182 (2%)
Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           +R+V+TGLG V+ +G++      SL EG +GI+  Q    S   + +   +K L T G I
Sbjct: 14  KRVVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGLI 72
Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K+ +      IYA ++ ++A+ DAG++ +     +  R G+I GS  G  R    G +
Sbjct: 73  DRKVVRFMSDASIYAFLSMEQAIADAGLSPEAY--QNNPRVGLIAGSGGGSPRFQVFGAD 130
Query: 190 AIK--VSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
           A++     K + P+ +  ++ +  SA LA      G +YSIS+A A+S + I NA   I 
Sbjct: 131 AMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSASATSAHCIGNAVEQIQ 190
Query: 248 KG 249
            G
Sbjct: 191 LG 192

>pdb|2VB7|C Chain C, Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Apo Structure After Soak In Peg Solution Length = 406

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 93/182 (51%), Gaps = 5/182 (2%)
Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           +R V+TGLG V+ +G++      SL EG +GI+  Q    S   + +   +K L T G I
Sbjct: 2   KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGLI 60
Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K+ +      IYA ++ ++A+ DAG++ +     +  R G+I GS  G  R    G +
Sbjct: 61  DRKVVRFMSDASIYAFLSMEQAIADAGLSPEAY--QNNPRVGLIAGSGGGSPRFQVFGAD 118
Query: 190 AIK--VSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
           A++     K + P+ +  ++ +  SA LA      G +YSIS+A A+S + I NA   I 
Sbjct: 119 AMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSAXATSAHCIGNAVEQIQ 178
Query: 248 KG 249
            G
Sbjct: 179 LG 180

>pdb|3OYT|A Chain A, 1.84 Angstrom Resolution Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase I (Fabb) From Yersinia Pestis Co92 Length = 410

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 92/176 (52%), Gaps = 6/176 (3%)
Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLST-GGW 128
           +R V+TGLG V+ +G++      SL EG +GI+  Q F  +   + +  ++K  S     
Sbjct: 5   KRAVITGLGIVSSIGNNQQEVLASLQEGRSGITFAQEFKDAGXRSHVWGDVKLQSEPKDL 64
Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGF 188
           I  K+ +      IYA +A ++A+ D+G+++    ++   R G+++GS  G  R    G 
Sbjct: 65  IDRKVLRFXSDASIYAYLAXQEAIADSGLSDS---QVSNFRSGLVVGSGGGSPRNQVAGS 121
Query: 189 EAIKV--SYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNA 242
           +A +     K + P+ +  +  +  SA LA      G +YSIS+ACA+S + I +A
Sbjct: 122 DAXRTPRGLKGVGPYXVTKAXASGVSACLATPFKIKGVNYSISSACATSAHCIGHA 177

>pdb|1TQY|B Chain B, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Length = 415

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/194 (22%), Positives = 89/194 (45%), Gaps = 18/194 (9%)
Query: 64  HKEPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSL 123
           +K+  ++ +++TG+G V P G     + +++L+G  G+  +  FD S +P  +A +I   
Sbjct: 3   YKDDDDKSVLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVTRFDVSRYPATLAGQIDDF 62
Query: 124 STGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGL-- 181
                I  ++  + D     AL A   AL DA    +   + D    GV+  +A GG   
Sbjct: 63  HAPDHIPGRLLPQTDPSTRLALTAADWALQDAKADPESLTDYD---MGVVTANACGGFDF 119
Query: 182 ------RVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASS 235
                 ++ ++G +++ V Y+  + FY       + +  +++  G  GPS ++    A  
Sbjct: 120 THREFRKLWSEGPKSVSV-YESFAWFYA------VNTGQISIRHGMRGPSSALVAEQAGG 172
Query: 236 NYSILNATSHIIKG 249
             ++ +A   I +G
Sbjct: 173 LDALGHARRTIRRG 186

>pdb|4EWG|A Chain A, Crystal Structure Of A Beta-Ketoacyl Synthase From Burkholderia Phymatum Stm815 Length = 412

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 80/190 (42%), Gaps = 20/190 (10%)
Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSE-FPTRIAAEIKSLSTGGW 128
           +R+V+TG+G VT LG        +L  G   +  +  +D  E   TR+AA +   +    
Sbjct: 6   KRVVITGMGGVTALGSRWDEIEAALKAGRNAVRRMPDWDYFESLHTRLAAPLPGFAQPAD 65
Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGG---LRVLN 185
              K  +   +  +YA+ A + AL DAG     S  +   R GV  GS+ G    +R   
Sbjct: 66  WPRKKTRSMGRVSMYAVRASELALADAGFAGDES--ISDGRMGVAYGSSSGSVEPIRAFG 123
Query: 186 DGFEAIKV------SYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSI 239
              E+  +      SY +M P       T   +  L  DL   G     S+ACAS + +I
Sbjct: 124 TMLESGSMTDVTSNSYVQMMPH------TTAVNVSLFWDL--KGRIVPTSSACASGSQAI 175
Query: 240 LNATSHIIKG 249
             A  +I  G
Sbjct: 176 GYAYENIAMG 185

>pdb|2WGD|A Chain A, Crystal Structure Of Kasa Of Mycobacterium Tuberculosis Length = 416

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 162 SGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSY-KKMSPFYIPYSLTNMASAVLAMDLG 220
           S E+D  R  V++G+ +GG   + + ++ +     +K+SP  +   + N A+AV+ + LG
Sbjct: 100 SPEVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLG 159
Query: 221 WTGPSYSISTACASSNYSILNATSHIIKGDT 251
                 +  +AC+S + +I +A   I+ GD 
Sbjct: 160 ARAGVMTPVSACSSGSEAIAHAWRQIVMGDA 190

>pdb|2WGF|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa Variant Length = 416

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 162 SGELDKSRCGVIIGSAMGGLRVLNDGFEAIKV-SYKKMSPFYIPYSLTNMASAVLAMDLG 220
           S E+D  R  V++G+ +GG   + + ++ +     +K+SP  +   + N A+AV+ + LG
Sbjct: 100 SPEVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLG 159
Query: 221 WTGPSYSISTACASSNYSILNATSHIIKGDT 251
                 +  +A +S + +I +A   I+ GD 
Sbjct: 160 ARAGVMTPVSAQSSGSEAIAHAWRQIVMGDA 190

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	263
1tqy_A	424	Beta-ketoacyl synthase/acyl transferase; alpha-bet	5e-60
2iwz_A	438	3-oxoacyl-[acyl-carrier-protein] synthase; mitocho	2e-59
1ox0_A	430	Beta ketoacyl-acyl carrier protein synthase; trans	2e-59
1e5m_A	416	KAS II, beta ketoacyl acyl carrier protein synthas	3e-59
3o04_A	413	LMO2201 protein, beta-keto-acyl carrier protein sy	4e-59
3ho9_A	427	3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF,	5e-59
2gqd_A	437	3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli	1e-58
3kzu_A	428	3-oxoacyl-(acyl-carrier-protein) synthase II; seat	1e-58
4ddo_A	451	3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci	2e-58
1tqy_B	415	Actinorhodin polyketide putative beta-ketoacyl SY;	2e-58
1j3n_A	408	3-oxoacyl-(acyl-carrier protein) synthase II; cond	3e-57
4ewg_A	412	Beta-ketoacyl synthase; ssgcid, structural genomic	1e-56
2wge_A	416	3-oxoacyl-[acyl-carrier-protein] synthase 1; beta	1e-55
3mqd_A	428	Beta-ketoacyl synthase; ssgcid, ALS collaborative	2e-55
2vba_A	406	3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop	5e-55
2gp6_A	434	3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol	1e-54
2ix4_A	431	3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke	2e-52
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	2e-47
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	2e-33
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	9e-33
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	3e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-06
3hhd_A	965	Fatty acid synthase; transferase, multienzyme, meg	8e-05

>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Length = 424

 Score =  194 bits (496), Expect = 5e-60
 Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 10/189 (5%)

Query: 69  ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
           +RR+V+TG+G   P G+    F   L  G T    I  FD S + +++AAE         
Sbjct: 2   KRRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQVAAEADFDPVAEG 61

Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGL------- 181
             P+   + D+   +A+   ++A   +G+       LD +R GV +GSA+          
Sbjct: 62  FGPRELDRMDRASQFAVACAREAFAASGLDP---DTLDPARVGVSLGSAVAAATSLEREY 118

Query: 182 RVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILN 241
            +L+D     +V    +S     Y + ++  A +A  +G  GP   +ST C S   S+ N
Sbjct: 119 LLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAEGPVTMVSTGCTSGLDSVGN 178

Query: 242 ATSHIIKGD 250
           A   I +G 
Sbjct: 179 AVRAIEEGS 187

>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A Length = 438

 Score =  193 bits (493), Expect = 2e-59
 Identities = 59/196 (30%), Positives = 98/196 (50%), Gaps = 9/196 (4%)

Query: 62  TKHKEPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIK 121
            + +    RR+V+TG+G VTPLG   HL    L+ G +GI  + G +    P  +AA + 
Sbjct: 13  IEGRSRLHRRVVITGIGLVTPLGVGTHLVWDRLIGGESGIVSLVGEEYKSIPCSVAAYVP 72

Query: 122 SLSTGG------WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIG 175
             S  G      ++S    K      I A+ A + A+ D+G       E D+   GV IG
Sbjct: 73  RGSDEGQFNEQNFVSKSDIKSMSSPTIMAIGAAELAMKDSGWH--PQSEADQVATGVAIG 130

Query: 176 SAMGGLRVLNDGFEAIKVS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACAS 234
             M  L V+++     +   Y K+SPF++P  L NMA+  +++     GP++++STAC +
Sbjct: 131 MGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYKLKGPNHAVSTACTT 190

Query: 235 SNYSILNATSHIIKGD 250
             +++ ++   I  GD
Sbjct: 191 GAHAVGDSFRFIAHGD 206

>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A Length = 430

 Score =  193 bits (493), Expect = 2e-59
 Identities = 65/182 (35%), Positives = 95/182 (52%), Gaps = 4/182 (2%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
            R+VVTG G  +P+G+    F  SL  G  GI  I  FD S+F    AAEI+      + 
Sbjct: 23  NRVVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGITKFDHSDFDVHNAAEIQDFPFDKYF 82

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K   + D Y +YAL A ++A+  A +       L++ R GVI+ S +GG++ + D   
Sbjct: 83  VKKDTNRFDNYSLYALYAAQEAVNHANLDV---EALNRDRFGVIVASGIGGIKEIEDQVL 139

Query: 190 AIKVS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIK 248
            +     K++ P  +P +L NMAS  +AM  G  G   SI+TAC+SSN +I +A   I  
Sbjct: 140 RLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVCKSINTACSSSNDAIGDAFRSIKF 199

Query: 249 GD 250
           G 
Sbjct: 200 GF 201

>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 Length = 416

 Score =  192 bits (490), Expect = 3e-59
 Identities = 65/182 (35%), Positives = 102/182 (56%), Gaps = 4/182 (2%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           +R+VVTGLGA+TP+G+    +   L+EG  GI  I  FD S+   R   E+K      ++
Sbjct: 7   KRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDATQFL 66

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K AK+ D++  +A+ A ++A+ DA +      EL+    GV+IG+ +GGL+VL D   
Sbjct: 67  DRKEAKRMDRFCHFAVCASQQAINDAKLVI---NELNADEIGVLIGTGIGGLKVLEDQQT 123

Query: 190 AIKVS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIK 248
            +      + SPF IP  + NMAS + A++LG  GP+    TACA+ + +I +A   +  
Sbjct: 124 ILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGSNAIGDAFRLVQN 183

Query: 249 GD 250
           G 
Sbjct: 184 GY 185

>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} Length = 413

 Score =  192 bits (490), Expect = 4e-59
 Identities = 60/182 (32%), Positives = 107/182 (58%), Gaps = 4/182 (2%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           RR+VVTG+GAVTP+G+DA     +  +GV G++ +   +  +FP +IAAE+K      ++
Sbjct: 4   RRVVVTGIGAVTPIGNDAETSWENAKKGVNGVAKMTRLNPDDFPVKIAAELKDFDVEKYL 63

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K A+K D++  YA+ + + A+ D+G+      + + +R GV IGS +GG+      +E
Sbjct: 64  EKKEARKMDRFTHYAIASAEMAVQDSGLVI---DDSNANRVGVWIGSGIGGMETFETQYE 120

Query: 190 AIKVS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIK 248
                 ++++SPF++P  + +M S  +++  G  G + +  TACA++  SI +A   I +
Sbjct: 121 IFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGAKGINSTTVTACATATNSIGDAFKVIER 180

Query: 249 GD 250
           GD
Sbjct: 181 GD 182

>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A Length = 427

 Score =  192 bits (490), Expect = 5e-59
 Identities = 66/182 (36%), Positives = 105/182 (57%), Gaps = 4/182 (2%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           RR+VVTGLG ++P+G+       +LL G +GIS I  FD S + T+ A  +K  +    I
Sbjct: 18  RRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDII 77

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
           S K  +K D ++ Y +VAG +A+ D+G+      E + +R G  IGS +GGL ++ +   
Sbjct: 78  SRKEQRKMDAFIQYGIVAGVQAMQDSGLEIT---EENATRIGAAIGSGIGGLGLIEENHT 134

Query: 190 AIKVS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIK 248
           ++     +K+SPF++P ++ NM +  L +  G  GPS SI+TA  S  ++I +A   I  
Sbjct: 135 SLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATAATSGVHNIGHAARIIAY 194

Query: 249 GD 250
           GD
Sbjct: 195 GD 196

>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} Length = 437

 Score =  191 bits (488), Expect = 1e-58
 Identities = 59/184 (32%), Positives = 104/184 (56%), Gaps = 4/184 (2%)

Query: 68  KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG 127
           + +R+V+TG+GA++P+G+D      + L+GV GI  I   D   +   +A E+K+ +   
Sbjct: 26  QNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIED 85

Query: 128 WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDG 187
            I  K A++ D++  YA+VA ++A+ DA +      E    R GV IGS +GG+      
Sbjct: 86  HIDKKEARRMDRFTQYAIVAAREAVKDAQLDIN---ENTADRIGVWIGSGIGGMETFEIA 142

Query: 188 FEAIKVS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHI 246
            + +     +++SPF++P  + +MA+  +++DLG  GP+ +  TACA+   SI  A   +
Sbjct: 143 HKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIV 202

Query: 247 IKGD 250
            +GD
Sbjct: 203 QRGD 206

>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A Length = 428

 Score =  191 bits (487), Expect = 1e-58
 Identities = 60/189 (31%), Positives = 99/189 (52%), Gaps = 10/189 (5%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG-- 127
           RR+V+TGLG V+PL          LL G +G   +  F+  +   +IA  I         
Sbjct: 10  RRVVITGLGLVSPLASGVEETWKRLLAGESGARRVTEFEVDDLACQIACRIPVGDGTNGT 69

Query: 128 -----WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLR 182
                 + PK  +K D +++YA+ A  +AL DAG       + D+ R GV+IGS +GG+ 
Sbjct: 70  FNPDLHMDPKEQRKVDPFIVYAVGAADQALDDAGWH--PENDEDQVRTGVLIGSGIGGIE 127

Query: 183 VLNDGFEAIKVS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILN 241
            + +    ++    +++SPF+IP  L N+AS  +++     GP++S+ TACA+  ++I +
Sbjct: 128 GIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSIKHKLRGPNHSVVTACATGTHAIGD 187

Query: 242 ATSHIIKGD 250
           A   I  GD
Sbjct: 188 AARLIAFGD 196

>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* Length = 451

 Score =  191 bits (488), Expect = 2e-58
 Identities = 50/190 (26%), Positives = 92/190 (48%), Gaps = 11/190 (5%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG-- 127
            R+VVTG+G V+PLG    L    L+ G +G+  +      E   ++   ++ ++     
Sbjct: 24  LRVVVTGIGIVSPLGCGKELVWQRLIGGGSGLRRLGDDIAGELSAKVGGTVQDVAEDPEG 83

Query: 128 ------WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGL 181
                  +  K  +K D+++  A+VA  +AL +AG       E  + R   ++ S +GG 
Sbjct: 84  GFDPERSVPHKELRKMDRFIQMAMVAADEALAEAGWA--PEAEQQRERTATVVASGIGGF 141

Query: 182 RVLNDGFEAIKVS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSIL 240
             L +     +    +++SPF IP+ L+N+A+  +++   + GP     TACA+S  +I 
Sbjct: 142 PGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIKHRFRGPLGCPVTACAASVQAIG 201

Query: 241 NATSHIIKGD 250
           +A   I  G+
Sbjct: 202 DAMRMIRTGE 211

>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Length = 415

 Score =  190 bits (484), Expect = 2e-58
 Identities = 42/189 (22%), Positives = 80/189 (42%), Gaps = 4/189 (2%)

Query: 65  KEPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLS 124
           K+  ++ +++TG+G V P G     + +++L+G  G+  +  FD S +P  +A +I    
Sbjct: 4   KDDDDKSVLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVTRFDVSRYPATLAGQIDDFH 63

Query: 125 TGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVL 184
               I  ++  + D     AL A   AL DA         L     GV+  +A GG    
Sbjct: 64  APDHIPGRLLPQTDPSTRLALTAADWALQDAKADP---ESLTDYDMGVVTANACGGFDFT 120

Query: 185 NDGFEAIKVS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNAT 243
           +  F  +     K +S +        + +  +++  G  GPS ++    A    ++ +A 
Sbjct: 121 HREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSSALVAEQAGGLDALGHAR 180

Query: 244 SHIIKGDTV 252
             I +G  +
Sbjct: 181 RTIRRGTPL 189

>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Length = 408

 Score =  187 bits (477), Expect = 3e-57
 Identities = 70/182 (38%), Positives = 108/182 (59%), Gaps = 5/182 (2%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           RR+VVTGLGA+TP+G     FH + L G +G+  I  FD S  P RIAAE+  +  G ++
Sbjct: 2   RRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPITRFDASALPVRIAAEVD-VDPGAYL 60

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K  ++ D+++ YAL+A + AL DAG+  +   +LD  R G ++G+ +GG+        
Sbjct: 61  DRKELRRLDRFVQYALIAAQLALEDAGLKPE---DLDPERVGTLVGTGIGGMETWEAQSR 117

Query: 190 AIKVS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIK 248
                   ++SPF+IP  + NMASA +AM  G+TGPS ++ TACA+   ++ +A   I  
Sbjct: 118 VFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSSTVVTACATGADALGSALRMIQL 177

Query: 249 GD 250
           G+
Sbjct: 178 GE 179

>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} Length = 412

 Score =  185 bits (473), Expect = 1e-56
 Identities = 41/183 (22%), Positives = 75/183 (40%), Gaps = 4/183 (2%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFD-CSEFPTRIAAEIKSLSTGGW 128
           +R+V+TG+G VT LG        +L  G   +  +  +D      TR+AA +   +    
Sbjct: 6   KRVVITGMGGVTALGSRWDEIEAALKAGRNAVRRMPDWDYFESLHTRLAAPLPGFAQPAD 65

Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGF 188
              K  +   +  +YA+ A + AL DAG        +   R GV  GS+ G +  +    
Sbjct: 66  WPRKKTRSMGRVSMYAVRASELALADAGFA--GDESISDGRMGVAYGSSSGSVEPIRAFG 123

Query: 189 EAIKVS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
             ++      ++       + +  +  +++     G     S+ACAS + +I  A  +I 
Sbjct: 124 TMLESGSMTDVTSNSYVQMMPHTTAVNVSLFWDLKGRIVPTSSACASGSQAIGYAYENIA 183

Query: 248 KGD 250
            G 
Sbjct: 184 MGK 186

>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* Length = 416

 Score =  182 bits (465), Expect = 1e-55
 Identities = 40/184 (21%), Positives = 80/184 (43%), Gaps = 9/184 (4%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEF--PTRIAAEIKSLSTGG 127
             +VVT + A T +  D       LL G +GI  ++    +++    +I   +K      
Sbjct: 12  PSVVVTAVTATTSISPDIESTWKGLLAGESGIHALEDEFVTKWDLAVKIGGHLKD-PVDS 70

Query: 128 WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDG 187
            +     ++         + G +    AG  E     +D  R  V++G+ +GG   + + 
Sbjct: 71  HMGRLDMRRMSYVQRMGKLLGGQLWESAGSPE-----VDPDRFAVVVGTGLGGAERIVES 125

Query: 188 FEAIKVS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHI 246
           ++ +     +K+SP  +   + N A+AV+ + LG      +  +AC+S + +I +A   I
Sbjct: 126 YDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGARAGVMTPVSACSSGSEAIAHAWRQI 185

Query: 247 IKGD 250
           + GD
Sbjct: 186 VMGD 189

>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* Length = 428

 Score =  182 bits (465), Expect = 2e-55
 Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 5/204 (2%)

Query: 48  VAMSDAQSEKDLIITKHKEPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGF 107
           +A         L          RR+VVTG+G V+ +G +      SL E  +GIS  + +
Sbjct: 1   MAHHHHHHMGTLEAQTQGPGSMRRVVVTGMGIVSSIGSNTEEVTASLREAKSGISRAEEY 60

Query: 108 DCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDK 167
               F  ++      +     +  +  +   +   +  +A  +A+ DAG+TE+   E+  
Sbjct: 61  AELGFRCQVHG-APDIDIESLVDRRAMRFHGRGTAWNHIAMDQAIADAGLTEE---EVSN 116

Query: 168 SRCGVIIGSAMGGLRVLNDGFEAIKVS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSY 226
            R G+I+GS     R + D  +  +    K++ PF +P ++++ ASA LA      G +Y
Sbjct: 117 ERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFKIKGINY 176

Query: 227 SISTACASSNYSILNATSHIIKGD 250
           SIS+ACA+SN+ I NA   I  G 
Sbjct: 177 SISSACATSNHCIGNAYEMIQYGK 200

>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... Length = 406

 Score =  181 bits (461), Expect = 5e-55
 Identities = 58/183 (31%), Positives = 93/183 (50%), Gaps = 5/183 (2%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           +R V+TGLG V+ +G++      SL EG +GI+  Q    S   + +   +K L T G I
Sbjct: 2   KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGLI 60

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K+ +      IYA ++ ++A+ DAG++       +  R G+I GS  G  R    G +
Sbjct: 61  DRKVVRFMSDASIYAFLSMEQAIADAGLS--PEAYQNNPRVGLIAGSGGGSPRFQVFGAD 118

Query: 190 AIKVS--YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
           A++     K + P+ +  ++ +  SA LA      G +YSIS+ACA+S + I NA   I 
Sbjct: 119 AMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQ 178

Query: 248 KGD 250
            G 
Sbjct: 179 LGK 181

>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} Length = 434

 Score =  181 bits (461), Expect = 1e-54
 Identities = 42/184 (22%), Positives = 76/184 (41%), Gaps = 9/184 (4%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEF--PTRIAAEIKSLSTGG 127
             +VVTG+   T L  DA      LL+  +GI  +      EF  P RI   +       
Sbjct: 28  PYVVVTGIAMTTALATDAETTWKLLLDRQSGIRTLDDPFVEEFDLPVRIGGHLLE-EFDH 86

Query: 128 WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDG 187
            ++    ++       + V  ++   +AG  E     +D +R  V IG+ +G    L   
Sbjct: 87  QLTRIELRRMGYLQRMSTVLSRRLWENAGSPE-----VDTNRLMVSIGTGLGSAEELVFS 141

Query: 188 FEAIKVS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHI 246
           ++ ++    K +SP  +   + N A+A + ++        +  +ACAS   +I  A   I
Sbjct: 142 YDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHAKAGVMTPVSACASGAEAIARAWQQI 201

Query: 247 IKGD 250
           + G+
Sbjct: 202 VLGE 205

>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A Length = 431

 Score =  175 bits (445), Expect = 2e-52
 Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 20/199 (10%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCS--------------EFPTR 115
           RR+VVTGLG VTPLG         L++G  GI  +   D                +  ++
Sbjct: 1   RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSK 60

Query: 116 IAAEIKSLSTGGWISPKI---AKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGV 172
           +AA +   S  G     +   +K    ++ YA+ A  +AL DA        E +K R GV
Sbjct: 61  VAAFVPYGSNPGEFDEALWLNSKAVANFIGYAVCAADEALRDAEWLPT--EEEEKERTGV 118

Query: 173 IIGSAMGGLRVLNDGFEAIKVS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTA 231
            IG  +G +  + +  + I     +++SPF+IP  L NMAS  ++M  G+ GP+++  TA
Sbjct: 119 SIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVTA 178

Query: 232 CASSNYSILNATSHIIKGD 250
           CA+  +SI +AT  I  GD
Sbjct: 179 CATGAHSIGDATRMIQFGD 197

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688

 Score =  167 bits (425), Expect = 2e-47
 Identities = 40/209 (19%), Positives = 79/209 (37%), Gaps = 15/209 (7%)

Query: 50   MSDAQSEKDLIITKHKEPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDC 109
            + +   E+DL   +  + +         G    + +         ++ + G + +     
Sbjct: 923  IQEVIVEEDLEPFEASK-ETAEQFKHQHGDKVDIFEIPETGEY-SVKLLKGAT-LYIPKA 979

Query: 110  SEFPTRIAAEIKSLSTGGW------ISPKIAKKADKYLIYALVAGKKALVDAGIT--EQV 161
              F   +A +I +    GW      IS  I  + D   ++ LV+  +A + +GIT   ++
Sbjct: 980  LRFDRLVAGQIPT----GWNAKTYGISDDIISQVDPITLFVLVSVVEAFIASGITDPYEM 1035

Query: 162  SGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGW 221
               +  S  G   GS MGG+  L   F+         +       +  M++ V  + +  
Sbjct: 1036 YKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLLISS 1095

Query: 222  TGPSYSISTACASSNYSILNATSHIIKGD 250
            +GP  +   ACA+S  S+      I+ G 
Sbjct: 1096 SGPIKTPVGACATSVESVDIGVETILSGK 1124

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Length = 1887

 Score =  127 bits (321), Expect = 2e-33
 Identities = 40/209 (19%), Positives = 79/209 (37%), Gaps = 15/209 (7%)

Query: 50   MSDAQSEKDLIITKHKEPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDC 109
            + +   E+DL   +  + +         G    + +         ++ + G + +     
Sbjct: 1122 IQEVIVEEDLEPFEASK-ETAEQFKHQHGDKVDIFEIPETGE-YSVKLLKGAT-LYIPKA 1178

Query: 110  SEFPTRIAAEIKSLSTGGW------ISPKIAKKADKYLIYALVAGKKALVDAGIT--EQV 161
              F   +A +I +    GW      IS  I  + D   ++ LV+  +A + +GIT   ++
Sbjct: 1179 LRFDRLVAGQIPT----GWNAKTYGISDDIISQVDPITLFVLVSVVEAFIASGITDPYEM 1234

Query: 162  SGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGW 221
               +  S  G   GS MGG+  L   F+         +       +  M++ V  + +  
Sbjct: 1235 YKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLLISS 1294

Query: 222  TGPSYSISTACASSNYSILNATSHIIKGD 250
            +GP  +   ACA+S  S+      I+ G 
Sbjct: 1295 SGPIKTPVGACATSVESVDIGVETILSGK 1323

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Length = 1878

 Score =  125 bits (316), Expect = 9e-33
 Identities = 37/166 (22%), Positives = 66/166 (39%), Gaps = 13/166 (7%)

Query: 93   SLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW------ISPKIAKKADKYLIYALV 146
              +    G   +      +F   +A +I +    GW      +   I ++ D   +Y LV
Sbjct: 1138 YTVRLRKGA-TLLIPKALQFDRLVAGQIPT----GWDARRYGVPEDIIQQVDPVTLYVLV 1192

Query: 147  AGKKALVDAGIT--EQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIP 204
            +  +AL+ +GIT   +    +  S  G  IGS +GG   L   ++   +           
Sbjct: 1193 SVAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYLDKPVQKDILQE 1252

Query: 205  YSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGD 250
              +  MA+ V  + L  TGP  +   ACA++  S+      I++G 
Sbjct: 1253 SFVNTMAAWVNMLLLSSTGPIKTPVGACATAVESLDVGYDTIMQGK 1298

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 47.2 bits (112), Expect = 3e-06
 Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 11/101 (10%)

Query: 151 ALVDAGIT-EQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTN 209
           A+VD GI    + G    +  GV +G         +D  EA+    + +  + +      
Sbjct: 89  AIVDGGINPASLRG----TSTGVWVG-VSS-----SDASEALSRDPETLVGYSMIGCQRA 138

Query: 210 MASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGD 250
           M +  L+    + GPS +I TAC+SS  ++ +A   I  G+
Sbjct: 139 MMANRLSFFFDFKGPSITIDTACSSSLLALQSAYQAIRGGE 179

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.8 bits (110), Expect = 4e-06
 Identities = 38/247 (15%), Positives = 80/247 (32%), Gaps = 55/247 (22%)

Query: 7   QSPLCTSPIPYYRNDHALMSSMLQSSKRHKK--LISR--CNFGKTVAMSDAQSEKDLIIT 62
                +S I    +        L  SK ++   L+     N  K     +    K L+ T
Sbjct: 215 SRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQN-AKAWNAFNLSC-KILLTT 272

Query: 63  KHKEPKERRIVVTGLGAVT----PLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAA 118
           + K+      V   L A T     L   +       ++ +  +         + P     
Sbjct: 273 RFKQ------VTDFLSAATTTHISLDHHSMTLTPDEVKSL--LLKYLDCRPQDLP----R 320

Query: 119 EIKSLSTGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAM 178
           E+ +       +P            +++A  +++ D   T      ++  +   II S+ 
Sbjct: 321 EVLT------TNP---------RRLSIIA--ESIRDGLATWDNWKHVNCDKLTTIIESS- 362

Query: 179 GGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYS----ISTACAS 234
             L VL       +  + ++S F  P S  ++ + +L++ + W     S    +      
Sbjct: 363 --LNVLEP--AEYRKMFDRLSVF--PPS-AHIPTILLSL-I-WFDVIKSDVMVVVNKLH- 412

Query: 235 SNYSILN 241
             YS++ 
Sbjct: 413 -KYSLVE 418

>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Length = 965

 Score = 42.5 bits (101), Expect = 8e-05
 Identities = 22/93 (23%), Positives = 34/93 (36%), Gaps = 25/93 (26%)

Query: 151 ALVDAGITEQVSGELDKSRCGVIIGSA----MGGLRVLNDGFEAIKVSYKKMSPFYIPYS 206
           A+VD GI       L  +  GV +G +       L    +                  YS
Sbjct: 91  AIVDGGI---NPDSLRGTHTGVWVGVSGSETSEALSRDPETLVG--------------YS 133

Query: 207 LTNMASAV----LAMDLGWTGPSYSISTACASS 235
           +     A+    L+    + GPS ++ TAC+SS
Sbjct: 134 MVGCQRAMMANRLSFFFDFRGPSIALDTACSSS 166

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	263
3ho9_A	427	3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF,	100.0
3o04_A	413	LMO2201 protein, beta-keto-acyl carrier protein sy	100.0
3kzu_A	428	3-oxoacyl-(acyl-carrier-protein) synthase II; seat	100.0
1e5m_A	416	KAS II, beta ketoacyl acyl carrier protein synthas	100.0
4ewg_A	412	Beta-ketoacyl synthase; ssgcid, structural genomic	100.0
1ox0_A	430	Beta ketoacyl-acyl carrier protein synthase; trans	100.0
1j3n_A	408	3-oxoacyl-(acyl-carrier protein) synthase II; cond	100.0
2gqd_A	437	3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli	100.0
2wge_A	416	3-oxoacyl-[acyl-carrier-protein] synthase 1; beta	100.0
1tqy_B	415	Actinorhodin polyketide putative beta-ketoacyl SY;	100.0
2vba_A	406	3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop	100.0
2gp6_A	434	3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol	100.0
2iwz_A	438	3-oxoacyl-[acyl-carrier-protein] synthase; mitocho	100.0
1tqy_A	424	Beta-ketoacyl synthase/acyl transferase; alpha-bet	100.0
4ddo_A	451	3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci	100.0
3mqd_A	428	Beta-ketoacyl synthase; ssgcid, ALS collaborative	100.0
3hhd_A	965	Fatty acid synthase; transferase, multienzyme, meg	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	100.0
2ix4_A	431	3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke	100.0
2qo3_A	915	Eryaii erythromycin polyketide synthase modules 3;	100.0
2hg4_A	917	DEBS, 6-deoxyerythronolide B synthase; ketosynthas	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.93
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.93
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.92
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.91
2h84_A	374	Steely1; thiolase-fold, type III polyketide syntha	99.57
1mzj_A	339	Beta-ketoacylsynthase III; beta-ketosynthase, arom	99.56
3tsy_A	979	Fusion protein 4-coumarate--COA ligase 1, resvera	99.51
1hnj_A	317	Beta-ketoacyl-acyl carrier protein synthase III; F	99.49
1u6e_A	335	3-oxoacyl-[acyl-carrier-protein] synthase III; tra	99.47
1u0m_A	382	Putative polyketide synthase; type III polyketide	99.47
2ebd_A	309	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	99.45
1ub7_A	322	3-oxoacyl-[acyl-carrier protein] synthase; fatty a	99.39
2x3e_A	331	3-oxoacyl-[acyl-carrier-protein] synthase 3; HED,	99.36
1zow_A	313	3-oxoacyl-[acyl-carrier-protein] synthase III; FAB	99.35
1wl4_A	397	Acetyl-coenzyme A acetyltransferase 2; thiolase fo	99.34
2ib8_A	395	Acetyl-COA acetyltransferase; thiolase fold, potas	99.33
1ulq_A	401	Putative acetyl-COA acetyltransferase; structural	99.33
1wdk_C	390	3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame	99.32
4dfe_A	333	3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci	99.32
3s21_A	345	3-oxoacyl-[ACP] synthase III; non-decarboxylative	99.31
2vu1_A	392	Acetyl-COA acetyltransferase; acyltransferase, PHB	99.31
1afw_A	393	3-ketoacetyl-COA thiolase; fatty acid metabolism;	99.29
2wu9_A	442	3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o	99.28
2iik_A	418	3-ketoacyl-COA thiolase, peroxisomal; fatty acid m	99.26
3a5r_A	387	Benzalacetone synthase; chalcone synthase, type II	99.24
3goa_A	387	3-ketoacyl-COA thiolase; metabolism, fatty acid, p	99.23
2d3m_A	406	Pentaketide chromone synthase; chalcone synthase,	99.22
1ee0_A	402	2-pyrone synthase; polyketide synthase, thiolase f	99.22
4dd5_A	396	Acetyl-COA acetyltransferase; structural genomics,	99.18
1i88_A	389	CHS2, chalcone synthase 2; polyketide synthase, tr	99.17
4e1l_A	395	Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich,	99.17
3ss6_A	394	Acetyl-COA acetyltransferase; structural genomics,	99.16
1xes_A	413	Dihydropinosylvin synthase; native structure, tran	99.16
3led_A	392	3-oxoacyl-acyl carrier protein synthase III; struc	99.14
1ted_A	393	PKS18; thiolase fold, substrate binding tunnel, tr	99.13
3awk_A	402	Chalcone synthase-like polyketide synthase; type I	99.1
3il6_A	321	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	99.09
2p0u_A	413	Stilbenecarboxylate synthase 2; polyketide synthas	99.08
3oit_A	387	OS07G0271500 protein; type III polyketide synthase	99.07
3gwa_A	365	3-oxoacyl-(acyl-carrier-protein) synthase III; str	99.05
3ov2_A	393	Curcumin synthase; type III polyketide synthase, t	99.05
3svk_A	407	Acetyl-COA acetyltransferase; ssgcid, NIH, niaid,	99.02
3e1h_A	465	PKSIIINC, putative uncharacterized protein; resorc	98.87
3s3l_A	357	CERJ; acyltransferase, FABH homologue, KS III homo	98.86
3il3_A	323	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	98.86
4efi_A	354	3-oxoacyl-(acyl-carrier protein) synthase; structu	98.85
3euo_A	379	Type III pentaketide synthase; alpha helix, acyltr	98.85
2f82_A	450	HMG-COA synthase; HMGS1, transferase; 2.10A {Brass	98.82
3h78_A	359	PQS biosynthetic enzyme; PQSD, anthranilic acid, a	98.81
4ewp_A	350	3-oxoacyl-[acyl-carrier-protein] synthase 3; trans	98.6
3lma_A	347	Stage V sporulation protein AD (spovad); NESG, str	98.58
3v7i_A	413	Putative polyketide synthase; type III polyketide	98.57
3v4n_A	388	HMG-COA synthase; hydroxymethylglutaryl-COA syntha	98.56
1xpm_A	396	3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s	98.55
4egv_A	520	Acetyl-COA acetyltransferase; NEW SUB-family, thio	98.53
3sqz_A	425	Putative hydroxymethylglutaryl-COA synthase; thiol	98.5
2p8u_A	478	Hydroxymethylglutaryl-COA synthase, cytoplasmic; h	98.42
2v4w_A	460	Hydroxymethylglutaryl-COA synthase, mitochondrial;	98.4
2wya_A	460	Hydroxymethylglutaryl-COA synthase, mitochondrial;	98.29

>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A

Probab=100.00  E-value=4e-40  Score=303.93  Aligned_cols=193  Identities=34%  Similarity=0.561  Sum_probs=178.7

Q ss_pred             CCCCCcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHH
Q 024765           66 EPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYAL  145 (263)
Q Consensus        66 ~~~~~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l  145 (263)
                      ...+++|||||||+++|+|.++++||++|.+|+++|+++++|+...++.+++++|++||+.+||++++++.|||+++|++
T Consensus        14 ~~~~~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~i~~~~~~~~d~~~~l~l   93 (427)
T 3ho9_A           14 CVSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDIISRKEQRKMDAFIQYGI   93 (427)
T ss_dssp             ---CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTCSCCEEECCSSCCCTTTSCHHHHTTSCHHHHHHH
T ss_pred             CCCCCCEEEEeeeEECCCCCCHHHHHHHHHcCCCceeeCCccccccCccceeeEcCCCChhhcCCHHHHhhCCHHHHHHH
Confidence            33567899999999999999999999999999999999999999899999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCc
Q 024765          146 VAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGP  224 (263)
Q Consensus       146 ~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp  224 (263)
                      +++++||+|||+.++   +++..++|||+|++.+++...+..+..+ ..+...+.++.+++...+.++++|++.||++||
T Consensus        94 ~aa~~AL~dAGl~~~---~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~Gp  170 (427)
T 3ho9_A           94 VAGVQAMQDSGLEIT---EENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGP  170 (427)
T ss_dssp             HHHHHHHHHHTCCCC---TTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSC
T ss_pred             HHHHHHHHHCCCCcc---cccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHHHHHHHHHhCCCCC
Confidence            999999999999854   4778999999999999999888888888 778888999999999999999999999999999


Q ss_pred             cccccccchHHHHHHHHHHHHHHhcccceE-eeccCCC
Q 024765          225 SYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQAD  261 (263)
Q Consensus       225 ~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~~  261 (263)
                      +++|++||+||++||++|+++|++|+||++ |+|+|..
T Consensus       171 ~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~  208 (427)
T 3ho9_A          171 SISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKA  208 (427)
T ss_dssp             EECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECC
T ss_pred             eecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeeccc
Confidence            999999999999999999999999999965 5667654

>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}

Probab=100.00  E-value=1.3e-39  Score=299.36  Aligned_cols=193  Identities=32%  Similarity=0.599  Sum_probs=180.8

Q ss_pred             CCCCcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHH
Q 024765           67 PKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALV  146 (263)
Q Consensus        67 ~~~~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~  146 (263)
                      |.+++|+|||||+++|.|.++++||++|.+|+++++++++|+...++.+++++|++||+.+|+++++++.|||+++|+++
T Consensus         1 M~~~~v~ItG~g~~~P~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~i~~~~~~~~d~~~~l~l~   80 (413)
T 3o04_A            1 MDKRRVVVTGIGAVTPIGNDAETSWENAKKGVNGVAKMTRLNPDDFPVKIAAELKDFDVEKYLEKKEARKMDRFTHYAIA   80 (413)
T ss_dssp             CCCCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCGGGSSCCEEECCSSCCGGGTSCHHHHTTSCHHHHHHHH
T ss_pred             CCCCCEEEEEeEEECCCCCCHHHHHHHHHcCCCceeeCCccccccCccccccccCCCChhhccCHHHHhhCCHHHHHHHH
Confidence            45688999999999999999999999999999999999999988899999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCcc
Q 024765          147 AGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPS  225 (263)
Q Consensus       147 aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~  225 (263)
                      ++++||+|||+.++   ++++.|+|||+|++.|+....+..+..+ ..+...+.|+.+++...+.++++|++.||++||+
T Consensus        81 Aa~~AL~dAGl~~~---~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~  157 (413)
T 3o04_A           81 SAEMAVQDSGLVID---DSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGAKGIN  157 (413)
T ss_dssp             HHHHHHHHHTCCCC---TTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHHHTCCSCE
T ss_pred             HHHHHHHHcCCChh---HcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHHhCCCCcc
Confidence            99999999999854   4778999999999999999999988888 7888899999999999999999999999999999


Q ss_pred             ccccccchHHHHHHHHHHHHHHhcccceE-eeccCCCC
Q 024765          226 YSISTACASSNYSILNATSHIIKGDTVSN-SPSSQADI  262 (263)
Q Consensus       226 ~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~~i  262 (263)
                      ++|+++|+|+++||+.|+++|++|+||++ |+|+|..+
T Consensus       158 ~~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~  195 (413)
T 3o04_A          158 STTVTACATATNSIGDAFKVIERGDADAMITGGAEAPI  195 (413)
T ss_dssp             ECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCC
T ss_pred             eeecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccC
Confidence            99999999999999999999999999965 66777644

>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A

Probab=100.00  E-value=9.2e-40  Score=301.59  Aligned_cols=193  Identities=31%  Similarity=0.530  Sum_probs=177.8

Q ss_pred             CCCCcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecC-------CCCCCCCCCHHHHhhcCH
Q 024765           67 PKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIK-------SLSTGGWISPKIAKKADK  139 (263)
Q Consensus        67 ~~~~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~-------~fd~~~~i~~~~~~~~d~  139 (263)
                      -.+++|||||||+++|.|.++++||++|++|+++|+++++|+...++.+++++++       +||+.+||++++++.|||
T Consensus         7 ~~~~~~viTG~G~vsp~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~   86 (428)
T 3kzu_A            7 HHMRRVVITGLGLVSPLASGVEETWKRLLAGESGARRVTEFEVDDLACQIACRIPVGDGTNGTFNPDLHMDPKEQRKVDP   86 (428)
T ss_dssp             --CCCEEEEEEEEECSSCBSHHHHHHHHHTTCCCEEECCSSCCTTSSCCEEECCCBSSSSTTCBCGGGTSCHHHHTTSCH
T ss_pred             ccccceEEEeceEECCCcCCHHHHHHHHHcCCCeeeeCCccccccCcCceeeEecccccccccCChhhcCCHHHHHhCCH
Confidence            3578999999999999999999999999999999999999999999999999997       799999999999999999


Q ss_pred             HHHHHHHHHHHHHHHcCCCCcccCc-CCCCceEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHH
Q 024765          140 YLIYALVAGKKALVDAGITEQVSGE-LDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAM  217 (263)
Q Consensus       140 ~~~l~l~aa~~Al~dAGl~~~~~~~-~~~~r~gv~vG~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~  217 (263)
                      +++|+++++++||+||||+++   + ++..++|||+|++.+++...++++..+ ..+...++++.+++...+.++++|++
T Consensus        87 ~~~l~l~aa~~AL~dAGl~~~---~~id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~  163 (428)
T 3kzu_A           87 FIVYAVGAADQALDDAGWHPE---NDEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSI  163 (428)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCC---SHHHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTCTTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCChh---hhccccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccchhhhHHHHHHH
Confidence            999999999999999999853   3 456789999999999999888888888 77888899999999999999999999


Q ss_pred             HhCCCCccccccccchHHHHHHHHHHHHHHhcccceE-eeccCCCC
Q 024765          218 DLGWTGPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQADI  262 (263)
Q Consensus       218 ~lgl~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~~i  262 (263)
                      .||++||+++|+++|+||++||++|+++|++|+||++ |+|+|..+
T Consensus       164 ~lgl~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~  209 (428)
T 3kzu_A          164 KHKLRGPNHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTESPV  209 (428)
T ss_dssp             HHTCCSCEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCC
T ss_pred             HcCCCCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcC
Confidence            9999999999999999999999999999999999965 67777654

>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1

Probab=100.00  E-value=4.2e-39  Score=296.19  Aligned_cols=193  Identities=35%  Similarity=0.593  Sum_probs=177.3

Q ss_pred             CCCCcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHH
Q 024765           67 PKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALV  146 (263)
Q Consensus        67 ~~~~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~  146 (263)
                      |.|++|+|||||+++|.|.++++||++|.+|+++++++++|+...++.+++++|++||+.+++++++++.|||+++|+++
T Consensus         4 ~~m~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~i~~fd~~~~~~~~~~~~~d~~~~l~l~   83 (416)
T 1e5m_A            4 LEKKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDATQFLDRKEAKRMDRFCHFAVC   83 (416)
T ss_dssp             --CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTSSCCEEECCCSCCGGGTSCHHHHHTSCHHHHHHHH
T ss_pred             CCCCCEEEEeeeEECCCCCCHHHHHHHHHcCCCeEeeCCccccccCccceeEEeCCCCccccCCHHHHHhcCHHHHHHHH
Confidence            34578999999999999999999999999999999999999988999999999999999888999999999999999999


Q ss_pred             HHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCcc
Q 024765          147 AGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPS  225 (263)
Q Consensus       147 aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~  225 (263)
                      ++++||+|||++++   +++..|+|||+|++.+++...++.+..+ ..+...++|+.+++.+.+.++++|++.||++||+
T Consensus        84 aa~~Al~dAg~~~~---~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~  160 (416)
T 1e5m_A           84 ASQQAINDAKLVIN---ELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPN  160 (416)
T ss_dssp             HHHHHHHHHTCCCC---TTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCE
T ss_pred             HHHHHHHHcCCChh---hcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHHHHHHhCCCCce
Confidence            99999999999854   4778899999999999988888888777 7777889999999999999999999999999999


Q ss_pred             ccccccchHHHHHHHHHHHHHHhcccceE-eeccCCCC
Q 024765          226 YSISTACASSNYSILNATSHIIKGDTVSN-SPSSQADI  262 (263)
Q Consensus       226 ~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~~i  262 (263)
                      ++|+++|+||++||++|+++|++|+||++ |+|+|..+
T Consensus       161 ~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~  198 (416)
T 1e5m_A          161 NCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAI  198 (416)
T ss_dssp             ECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCC
T ss_pred             eCccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccC
Confidence            99999999999999999999999999965 66677544

>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}

Probab=100.00  E-value=8.4e-39  Score=293.88  Aligned_cols=190  Identities=22%  Similarity=0.310  Sum_probs=176.8

Q ss_pred             CCCcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCCCC-CCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHH
Q 024765           68 KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCS-EFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALV  146 (263)
Q Consensus        68 ~~~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~~~-~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~  146 (263)
                      .|++|+|||||+++|.|.++++||++|.+|+++++++++|+.. .++.+++++|++||+.+|+++++.+.|||+++|+++
T Consensus         4 ~m~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~v~~fd~~~~i~~~~~~~~d~~~~l~l~   83 (412)
T 4ewg_A            4 SMKRVVITGMGGVTALGSRWDEIEAALKAGRNAVRRMPDWDYFESLHTRLAAPLPGFAQPADWPRKKTRSMGRVSMYAVR   83 (412)
T ss_dssp             CCCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCCEECGGGGGSSSCCCCEEBCCSCCCCCTTSCHHHHTTCCHHHHHHHH
T ss_pred             CCCEEEEEeeEEECCCcCCHHHHHHHHHcCCCceeeCCccccccCCccceeeecCCCChhhhCCHHHHhhCCHHHHHHHH
Confidence            4578999999999999999999999999999999999888776 788899999999999999999999999999999999


Q ss_pred             HHHHHHHHcCC-CCcccCcCCCCceEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCc
Q 024765          147 AGKKALVDAGI-TEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGP  224 (263)
Q Consensus       147 aa~~Al~dAGl-~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp  224 (263)
                      ++++||+|||+ +++   +++..++|||+|++.+++...++++..+ ..+...++++.++..+.+.++++|++.||++||
T Consensus        84 aa~~Al~dAGl~~~~---~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp  160 (412)
T 4ewg_A           84 ASELALADAGFAGDE---SISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFWDLKGR  160 (412)
T ss_dssp             HHHHHHHHHTCTTCG---GGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHHHHHHHHTTCCSC
T ss_pred             HHHHHHHhcCCCCcc---ccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHHHHHHHHhCCCCC
Confidence            99999999999 533   4678999999999999999999998888 778889999999999999999999999999999


Q ss_pred             cccccccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          225 SYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       225 ~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      +++|+++|+||++||++|+++|++|+||++ |+|+|.
T Consensus       161 ~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~  197 (412)
T 4ewg_A          161 IVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEE  197 (412)
T ss_dssp             EEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC
T ss_pred             cccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccc
Confidence            999999999999999999999999999965 567765

>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A

Probab=100.00  E-value=1.2e-38  Score=294.22  Aligned_cols=194  Identities=35%  Similarity=0.522  Sum_probs=178.6

Q ss_pred             CCCCCcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHH
Q 024765           66 EPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYAL  145 (263)
Q Consensus        66 ~~~~~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l  145 (263)
                      .|.|++|+|||||+++|.|.++++||++|.+|+++++++++|+...++.++++++++||+.+|+++++.++|||+++|++
T Consensus        19 ~m~m~~v~ItG~g~~~P~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~d~~~~l~l   98 (430)
T 1ox0_A           19 HMKLNRVVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGITKFDHSDFDVHNAAEIQDFPFDKYFVKKDTNRFDNYSLYAL   98 (430)
T ss_dssp             SCCCCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECCSSCCHHHHCCGGGGGTCCHHHHHHH
T ss_pred             cccCCCEEEEEEEEECCCcCCHHHHHHHHHcCCCeeeeCCcccccCCccceeeeccCCChhhcCCHHHHHhcCHHHHHHH
Confidence            35568999999999999999999999999999999999999998889999999999999988899999999999999999


Q ss_pred             HHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCc
Q 024765          146 VAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGP  224 (263)
Q Consensus       146 ~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp  224 (263)
                      +++++||+|||++++   +++..++|||+|++.+++...++++..+ ..+.+.++|+.+++.+.+.++++|++.||++||
T Consensus        99 ~aa~~AL~dAG~~~~---~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~Gp  175 (430)
T 1ox0_A           99 YAAQEAVNHANLDVE---ALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGV  175 (430)
T ss_dssp             HHHHHHHHHTTCCTT---TSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSC
T ss_pred             HHHHHHHHHcCCChh---hcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHhcCCCc
Confidence            999999999999854   4778899999999999988888888777 778888999999999999999999999999999


Q ss_pred             cccccccchHHHHHHHHHHHHHHhcccceE-eeccCCCC
Q 024765          225 SYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQADI  262 (263)
Q Consensus       225 ~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~~i  262 (263)
                      +++|+++|+||++||++|+++|++|+||++ |+|+|..+
T Consensus       176 ~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~  214 (430)
T 1ox0_A          176 CKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASI  214 (430)
T ss_dssp             EECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCC
T ss_pred             eEeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccc
Confidence            999999999999999999999999999965 66667544

>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1

Probab=100.00  E-value=1.6e-38  Score=291.64  Aligned_cols=189  Identities=38%  Similarity=0.681  Sum_probs=175.9

Q ss_pred             CcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHHH
Q 024765           70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGK  149 (263)
Q Consensus        70 ~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa~  149 (263)
                      ++|+|||||+++|+|.++++||++|.+|+++|+++++|+...++.++++++ +||+.+|+++++.++|||+++|++++++
T Consensus         2 ~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~-~fd~~~~~~~~~~~~~d~~~~l~~~aa~   80 (408)
T 1j3n_A            2 RRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPITRFDASALPVRIAAEV-DVDPGAYLDRKELRRLDRFVQYALIAAQ   80 (408)
T ss_dssp             CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECC-CCCGGGTSCHHHHTTSCHHHHHHHHHHH
T ss_pred             CCEEEEEeEEECCCCCCHHHHHHHHHcCCCeeeeccccCcccCccceEEEE-ccChhhcCCHHHHHhcCHHHHHHHHHHH
Confidence            689999999999999999999999999999999999999888999999999 8999988999999999999999999999


Q ss_pred             HHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCccccc
Q 024765          150 KALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSI  228 (263)
Q Consensus       150 ~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~tv  228 (263)
                      +||+|||++++   +++..++|||+|++.+++..+++.+..+ ..+...++|+.+++.+++.++++|++.||++||+++|
T Consensus        81 ~AL~dAGl~~~---~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp~~~v  157 (408)
T 1j3n_A           81 LALEDAGLKPE---DLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSSTV  157 (408)
T ss_dssp             HHHHHHTCCGG---GSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCBCCB
T ss_pred             HHHHHcCCCcc---ccCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHHHHHHhCCCCceeCc
Confidence            99999999854   4778899999999999998888888877 7788889999999999999999999999999999999


Q ss_pred             cccchHHHHHHHHHHHHHHhcccceE-eeccCCCC
Q 024765          229 STACASSNYSILNATSHIIKGDTVSN-SPSSQADI  262 (263)
Q Consensus       229 ~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~~i  262 (263)
                      +++|+||++||++|+++|++|+||++ |+|+|..+
T Consensus       158 ~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~  192 (408)
T 1j3n_A          158 VTACATGADALGSALRMIQLGEADLVLAGGTEAAI  192 (408)
T ss_dssp             CCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCC
T ss_pred             cCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccC
Confidence            99999999999999999999999965 56777544

>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}

Probab=100.00  E-value=1.7e-38  Score=293.86  Aligned_cols=190  Identities=32%  Similarity=0.590  Sum_probs=176.2

Q ss_pred             CcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHHH
Q 024765           70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGK  149 (263)
Q Consensus        70 ~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa~  149 (263)
                      ++|+|||||+++|+|.++++||++|.+|+++|+++++|+...++.+++++|++||+.+++++++++.|||+++|++++++
T Consensus        28 ~~vaI~G~g~~~P~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~i~~fd~~~~~~~~~~~~~d~~~~l~l~aa~  107 (437)
T 2gqd_A           28 KRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIEDHIDKKEARRMDRFTQYAIVAAR  107 (437)
T ss_dssp             CCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTSSCCEEECCSSCCGGGTSCSTTTTTSCHHHHHHHHHHH
T ss_pred             CCEEEEEeeEECCCCCCHHHHHHHHHcCCCceeeCCccccccCccceeEEeCCCChhcCCCHHHHHhcCHHHHHHHHHHH
Confidence            68999999999999999999999999999999999999988899999999999999888999999999999999999999


Q ss_pred             HHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCccccc
Q 024765          150 KALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSI  228 (263)
Q Consensus       150 ~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~tv  228 (263)
                      +||+|||++++   +++..|+|||+|++.+++...++.+..+ ..+...++|+.+++...+.++++|++.||++||+++|
T Consensus       108 ~AL~dAGl~~~---~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~~~v  184 (437)
T 2gqd_A          108 EAVKDAQLDIN---ENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGAT  184 (437)
T ss_dssp             HHHHHHTCCCC---TTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSSEECB
T ss_pred             HHHHHcCCCcc---ccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHHhCCCCceEEe
Confidence            99999999854   4678899999999999988888888777 7777889999999999999999999999999999999


Q ss_pred             cccchHHHHHHHHHHHHHHhcccceE-eeccCCCC
Q 024765          229 STACASSNYSILNATSHIIKGDTVSN-SPSSQADI  262 (263)
Q Consensus       229 ~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~~i  262 (263)
                      +++|+||++||++|+++|++|+||++ |+|+|..+
T Consensus       185 ~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~  219 (437)
T 2gqd_A          185 VTACATGTNSIGEAFKIVQRGDADAMITGGTEAPI  219 (437)
T ss_dssp             CCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCC
T ss_pred             cCCccHHHHHHHHHHHHHHcCCCCEEEEeeecccc
Confidence            99999999999999999999999965 66677544

>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*

Probab=100.00  E-value=3e-38  Score=290.47  Aligned_cols=189  Identities=22%  Similarity=0.325  Sum_probs=172.7

Q ss_pred             CCCcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCC--CCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHH
Q 024765           68 KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFD--CSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYAL  145 (263)
Q Consensus        68 ~~~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~--~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l  145 (263)
                      .+++|||||||+++|+|.++++||++|.+|+++|+++++|+  ...++.+++|+|++ |+.+|+++++++.|||+++|++
T Consensus        10 ~~~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~d~~~~l~l   88 (416)
T 2wge_A           10 GFPSVVVTAVTATTSISPDIESTWKGLLAGESGIHALEDEFVTKWDLAVKIGGHLKD-PVDSHMGRLDMRRMSYVQRMGK   88 (416)
T ss_dssp             SSCCEEEEEEEEEESSCSSHHHHHHHHHTTCCCCEECCCHHHHHHTCSCCEEBCCSS-CGGGGCCHHHHHHSCHHHHHHH
T ss_pred             CCCcEEEEeeEEECCCCCCHHHHHHHHHcCCCEEEeCCccccccccCCccEEEEeCC-chhhhCCHHHHHhcCHHHHHHH
Confidence            45689999999999999999999999999999999998887  45678899999988 8888899999999999999999


Q ss_pred             HHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCc
Q 024765          146 VAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGP  224 (263)
Q Consensus       146 ~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp  224 (263)
                      +++++||+|||+.     +++..|+|||+|++.+++...++++..+ ..+...+.|+.+++...+.++++|++.||++||
T Consensus        89 ~aa~~AL~dAG~~-----~~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp  163 (416)
T 2wge_A           89 LLGGQLWESAGSP-----EVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGARAG  163 (416)
T ss_dssp             HHHHHHHHHTTCC-----CCCGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSC
T ss_pred             HHHHHHHHHcCCC-----ccCCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHHHHHHHHhccCCC
Confidence            9999999999993     3667899999999999998888888887 778888999999999999999999999999999


Q ss_pred             cccccccchHHHHHHHHHHHHHHhcccceE-eeccCCCC
Q 024765          225 SYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQADI  262 (263)
Q Consensus       225 ~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~~i  262 (263)
                      +++|+++|+||++||++|+++|++|+||++ |+|+|..+
T Consensus       164 ~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~  202 (416)
T 2wge_A          164 VMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPI  202 (416)
T ss_dssp             EECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCC
T ss_pred             cccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCcc
Confidence            999999999999999999999999999965 56667543

>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1

Probab=100.00  E-value=1.4e-38  Score=292.72  Aligned_cols=191  Identities=23%  Similarity=0.359  Sum_probs=175.7

Q ss_pred             CCCcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHH
Q 024765           68 KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVA  147 (263)
Q Consensus        68 ~~~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~a  147 (263)
                      ..++|+|||||+++|+|.++++||++|.+|+++++++++|+...++.+++++|++||+.+|+++++.+.|||+++|++++
T Consensus         7 ~~~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~d~~~~l~l~a   86 (415)
T 1tqy_B            7 DDKSVLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVTRFDVSRYPATLAGQIDDFHAPDHIPGRLLPQTDPSTRLALTA   86 (415)
T ss_dssp             ---CEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECTTTTGGGSSCCEEECCCSCCHHHHSCTTTGGGCCHHHHHHHHH
T ss_pred             CCCCEEEEeeEEECCCCCCHHHHHHHHHcCCCcEEECCcccccCCCcceEEEeCCCCchhcCCHHHHHhcCHHHHHHHHH
Confidence            34689999999999999999999999999999999999998888889999999999998889999999999999999999


Q ss_pred             HHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCccc
Q 024765          148 GKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSY  226 (263)
Q Consensus       148 a~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~  226 (263)
                      +++||+|||+.++   +++..++|||+|++.+++...++++..+ ..+...++++.+++...+.++++|++.||++||++
T Consensus        87 a~~AL~dAGl~~~---~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp~~  163 (415)
T 1tqy_B           87 ADWALQDAKADPE---SLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSS  163 (415)
T ss_dssp             HHHHHHHTTCCGG---GSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTCCSSCE
T ss_pred             HHHHHHHcCCCcc---ccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHHHHHHHHhCCCCceE
Confidence            9999999999854   4778899999999999999988888888 77788899999999999999999999999999999


Q ss_pred             cccccchHHHHHHHHHHHHHHhcccceE-eeccCCCC
Q 024765          227 SISTACASSNYSILNATSHIIKGDTVSN-SPSSQADI  262 (263)
Q Consensus       227 tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~~i  262 (263)
                      +|+++|+||++||++|+++|++| ||++ |+|+|..+
T Consensus       164 ~v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~  199 (415)
T 1tqy_B          164 ALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSAL  199 (415)
T ss_dssp             EEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCC
T ss_pred             eecCCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcC
Confidence            99999999999999999999999 9965 67777644

>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ...

Probab=100.00  E-value=6.8e-39  Score=293.96  Aligned_cols=188  Identities=31%  Similarity=0.450  Sum_probs=170.9

Q ss_pred             CcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHHH
Q 024765           70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGK  149 (263)
Q Consensus        70 ~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa~  149 (263)
                      ++|+|||||+++|+|.++++||++|.+|+++|+++++|+...++.+++++|+ ||+.+|+++++.+.|||+++|++++++
T Consensus         2 ~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~-fd~~~~~~~~~~~~~d~~~~l~l~aa~   80 (406)
T 2vba_A            2 KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGLIDRKVVRFMSDASIYAFLSME   80 (406)
T ss_dssp             CCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECHHHHHTTCSCCEEECCC-CCCTTSSCHHHHTTCCHHHHHHHHHHH
T ss_pred             CCEEEEeeEEECCCCCCHHHHHHHHHcCCCeEEeCCcccccCCccceEEEec-CChhhcCCHHHHHhcCHHHHHHHHHHH
Confidence            6899999999999999999999999999999999988877788889999998 999999999999999999999999999


Q ss_pred             HHHHHcCCCCcccCcCCC-CceEEEEeecCCChhhHHHHHHHHH--hccCCCCCcccccccchHHHHHHHHHhCCCCccc
Q 024765          150 KALVDAGITEQVSGELDK-SRCGVIIGSAMGGLRVLNDGFEAIK--VSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSY  226 (263)
Q Consensus       150 ~Al~dAGl~~~~~~~~~~-~r~gv~vG~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~  226 (263)
                      +||+|||++++   +++. .|+|||+|++.+++...++++..+.  .+...++|+.+++.+.+.++++|++.||++||++
T Consensus        81 ~Al~dAg~~~~---~i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~Gp~~  157 (406)
T 2vba_A           81 QAIADAGLSPE---AYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNY  157 (406)
T ss_dssp             HHHHHHTCCHH---HHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTTTCCSCEE
T ss_pred             HHHHHCCCChh---HcCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHHHHHHHhccCCCcee
Confidence            99999999854   3566 8999999999999988888877763  4555678888999999999999999999999999


Q ss_pred             cccccchHHHHHHHHHHHHHHhcccceE-eeccCCC
Q 024765          227 SISTACASSNYSILNATSHIIKGDTVSN-SPSSQAD  261 (263)
Q Consensus       227 tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~~  261 (263)
                      +|+++|+||++||++|+++|++|+||++ |+|+|..
T Consensus       158 ~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~  193 (406)
T 2vba_A          158 SISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEEL  193 (406)
T ss_dssp             EEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECC
T ss_pred             eeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccc
Confidence            9999999999999999999999999965 5666654

>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=7.8e-38  Score=289.06  Aligned_cols=188  Identities=21%  Similarity=0.268  Sum_probs=172.3

Q ss_pred             CCCcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCC--CCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHH
Q 024765           68 KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFD--CSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYAL  145 (263)
Q Consensus        68 ~~~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~--~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l  145 (263)
                      .+++|+|||||+++|+|.++++||++|++|+++|+++++|+  ...++.+++|+|++ |+.+|+++++++.|||+++|++
T Consensus        26 ~~~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~v~~-d~~~~~~~~~~~~~d~~~~l~l  104 (434)
T 2gp6_A           26 AFPYVVVTGIAMTTALATDAETTWKLLLDRQSGIRTLDDPFVEEFDLPVRIGGHLLE-EFDHQLTRIELRRMGYLQRMST  104 (434)
T ss_dssp             TSCCEEEEEEEEECSSCSSHHHHHHHHHTTCCCEEECCCHHHHHHCCSCCEEECCSC-CSTTSSCHHHHHTCCHHHHHHH
T ss_pred             CCCCEEEEeeEEeCCCCCCHHHHHHHHHcCCCeeeeCCccccccccCccceeEEcCC-chhhhCCHHHHHhCCHHHHHHH
Confidence            34689999999999999999999999999999999999887  55778899999988 8888899999999999999999


Q ss_pred             HHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCc
Q 024765          146 VAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGP  224 (263)
Q Consensus       146 ~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp  224 (263)
                      +++++||+|||+.     +.++.|+|||+|++.+++...++++..+ ..+...++|+.+++.+.+.++++|++.||++||
T Consensus       105 ~aa~~ALedAG~~-----~~~~~~igv~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~lgl~Gp  179 (434)
T 2gp6_A          105 VLSRRLWENAGSP-----EVDTNRLMVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHAKAG  179 (434)
T ss_dssp             HHHHHHHHHTTCC-----CCCTTSEEEEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHHHHHHHHSCCCSC
T ss_pred             HHHHHHHHhcCCC-----ccCCCceEEEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHHHHHhhhhcCCCC
Confidence            9999999999993     3668999999999999998888888888 777888999999999999999999999999999


Q ss_pred             cccccccchHHHHHHHHHHHHHHhcccceE-eeccCCC
Q 024765          225 SYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQAD  261 (263)
Q Consensus       225 ~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~~  261 (263)
                      +++|+++|+||++||++|+++|++|+||++ |+|+|..
T Consensus       180 ~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~  217 (434)
T 2gp6_A          180 VMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETR  217 (434)
T ss_dssp             EECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCC
T ss_pred             eEEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccc
Confidence            999999999999999999999999999965 5666653

>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A

Probab=100.00  E-value=2.4e-38  Score=292.89  Aligned_cols=191  Identities=30%  Similarity=0.486  Sum_probs=175.2

Q ss_pred             CCcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCC------CCCCCCCCHHHHhhcCHHHH
Q 024765           69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKS------LSTGGWISPKIAKKADKYLI  142 (263)
Q Consensus        69 ~~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~------fd~~~~i~~~~~~~~d~~~~  142 (263)
                      +++|+|||||+++|+|.++++||++|.+|+++|+++++|+...++.++++++++      ||+.+|+++++++.|||+++
T Consensus        20 ~~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~d~~~~   99 (438)
T 2iwz_A           20 HRRVVITGIGLVTPLGVGTHLVWDRLIGGESGIVSLVGEEYKSIPCSVAAYVPRGSDEGQFNEQNFVSKSDIKSMSSPTI   99 (438)
T ss_dssp             ECCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCSGGGTTSSCCEEECCCBSSSTTSBCGGGTSCHHHHTTSCHHHH
T ss_pred             CCCEEEEeeeEECCCCCCHHHHHHHHHcCCCccccCCchhcccCccceeeeeccccccccCChhhcCCHHHHHhcCHHHH
Confidence            368999999999999999999999999999999999999888889999999987      99998999999999999999


Q ss_pred             HHHHHHHHHHHHcCCCC-cccCcCCCCceEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          143 YALVAGKKALVDAGITE-QVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       143 l~l~aa~~Al~dAGl~~-~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      |+++++++||+|||+++ +   +++..++|||+|++.+++..+++++..+ ..+...++|+.+++.+++.++++|++.||
T Consensus       100 l~l~aa~~AL~dAGl~~~~---~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg  176 (438)
T 2iwz_A          100 MAIGAAELAMKDSGWHPQS---EADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYK  176 (438)
T ss_dssp             HHHHHHHHHHHHHTCCCCS---HHHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHcCCCCcc---cccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHHHHHHHHHhC
Confidence            99999999999999985 3   3556799999999999998888888877 77778899999999999999999999999


Q ss_pred             CCCccccccccchHHHHHHHHHHHHHHhcccceE-eeccCCCC
Q 024765          221 WTGPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQADI  262 (263)
Q Consensus       221 l~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~~i  262 (263)
                      ++||+++|+++|+||++||++|+++|++|+||++ |+|+|..+
T Consensus       177 l~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~  219 (438)
T 2iwz_A          177 LKGPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCI  219 (438)
T ss_dssp             CCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCC
T ss_pred             CCCceeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhc
Confidence            9999999999999999999999999999999965 66777544

>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1

Probab=100.00  E-value=4.2e-38  Score=290.22  Aligned_cols=189  Identities=25%  Similarity=0.388  Sum_probs=168.1

Q ss_pred             CcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCC-CCHHHHhhcCHHHHHHHHHH
Q 024765           70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW-ISPKIAKKADKYLIYALVAG  148 (263)
Q Consensus        70 ~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~-i~~~~~~~~d~~~~l~l~aa  148 (263)
                      ++|+|||||+++|+|.++++||++|.+|+++++++++|+...++.++++++ +||+.+| +++++++.|||+++|+++++
T Consensus         3 ~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~-~fd~~~~~i~~~~~~~~d~~~~l~l~aa   81 (424)
T 1tqy_A            3 RRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQVAAEA-DFDPVAEGFGPRELDRMDRASQFAVACA   81 (424)
T ss_dssp             CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECC-CCCHHHHTCCHHHHHHSCHHHHHHHHHH
T ss_pred             CCEEEEeeEEECCCCCCHHHHHHHHHcCCCceeeCCCcccccCCcceeEEe-ccCHhhcCCCHHHHHhcCHHHHHHHHHH
Confidence            579999999999999999999999999999999999999888999999999 8999999 99999999999999999999


Q ss_pred             HHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHH---HhccCCCCCcccccccchHHHH----HHHHHhCC
Q 024765          149 KKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI---KVSYKKMSPFYIPYSLTNMASA----VLAMDLGW  221 (263)
Q Consensus       149 ~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~a~----~ia~~lgl  221 (263)
                      ++||+|||++++   +++..|+|||+|++.+++...++.+..+   ..+...+.++.+...+++.+++    +|++.||+
T Consensus        82 ~~AL~dAG~~~~---~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ia~~lgl  158 (424)
T 1tqy_A           82 REAFAASGLDPD---TLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGA  158 (424)
T ss_dssp             HHHHHHHTCCTT---TCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHHHHHHTC
T ss_pred             HHHHHHCCCCch---hcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhcccccccccchhHhHHHHhcCC
Confidence            999999999854   4778899999999999998888877776   2455566777766666555555    99999999


Q ss_pred             CCccccccccchHHHHHHHHHHHHHHhcccceE-eeccCCCC
Q 024765          222 TGPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQADI  262 (263)
Q Consensus       222 ~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~~i  262 (263)
                      +||+++|+++|+||++||++|+++|++|+||++ |+|+|..+
T Consensus       159 ~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~  200 (424)
T 1tqy_A          159 EGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPI  200 (424)
T ss_dssp             CSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCC
T ss_pred             CCceEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeecccC
Confidence            999999999999999999999999999999965 66677544

>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*

Probab=100.00  E-value=5.4e-38  Score=291.53  Aligned_cols=191  Identities=26%  Similarity=0.453  Sum_probs=176.5

Q ss_pred             CCcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecC--------CCCCCCCCCHHHHhhcCHH
Q 024765           69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIK--------SLSTGGWISPKIAKKADKY  140 (263)
Q Consensus        69 ~~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~--------~fd~~~~i~~~~~~~~d~~  140 (263)
                      +++|+|||||+++|+|.++++||++|.+|+++++++++|+...++.+++|+++        +||+.+||++++++.|||+
T Consensus        23 ~~~v~ItG~g~~~P~g~~~~~~w~~l~~g~s~i~~~~~~~~~~~~~~~~g~v~~~~~~~~~~fd~~~~i~~~~~~~~d~~  102 (451)
T 4ddo_A           23 TLRVVVTGIGIVSPLGCGKELVWQRLIGGGSGLRRLGDDIAGELSAKVGGTVQDVAEDPEGGFDPERSVPHKELRKMDRF  102 (451)
T ss_dssp             -CCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCHHHHTTSSCCEEECCCCTTTCTTTCCCGGGTSCHHHHTTSCHH
T ss_pred             CCCEEEEEeEEECCCCCCHHHHHHHHHcCCCeeeeCCccccccccCccceEccccccccccccchhhhCCHHHHhhCCHH
Confidence            47899999999999999999999999999999999998888888899999998        7999999999999999999


Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcC-CCCceEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHH
Q 024765          141 LIYALVAGKKALVDAGITEQVSGEL-DKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMD  218 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~-~~~r~gv~vG~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~  218 (263)
                      ++|+++++++||+|||+.++   ++ +..++|||+|++.+++...++++..+ ..+...++++.+++...+.++++|++.
T Consensus       103 ~~L~l~Aa~~AL~dAGl~~~---~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~  179 (451)
T 4ddo_A          103 IQMAMVAADEALAEAGWAPE---AEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIK  179 (451)
T ss_dssp             HHHHHHHHHHHHHHHTCCCC---SHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCChh---hcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccchHHHHHHHH
Confidence            99999999999999999864   35 67899999999999999888888888 777888999999999999999999999


Q ss_pred             hCCCCccccccccchHHHHHHHHHHHHHHhcccceE-eeccCCCC
Q 024765          219 LGWTGPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQADI  262 (263)
Q Consensus       219 lgl~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~~i  262 (263)
                      ||++||+++|+++|+||++||++|+++|++|+||++ |+|+|..+
T Consensus       180 lgl~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~  224 (451)
T 4ddo_A          180 HRFRGPLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAF  224 (451)
T ss_dssp             HTCCSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCC
T ss_pred             hcCCCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEecccccc
Confidence            999999999999999999999999999999999965 67777643

>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A*

Probab=100.00  E-value=3e-38  Score=291.50  Aligned_cols=190  Identities=29%  Similarity=0.430  Sum_probs=173.5

Q ss_pred             CCCCcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHH
Q 024765           67 PKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALV  146 (263)
Q Consensus        67 ~~~~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~  146 (263)
                      |.+++|+|||||+++|+|.++++||++|.+|+++++++++|+..+++.+++|+ .+||+.+||++++++.|||+++|+++
T Consensus        20 ~~m~~V~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~-~~fd~~~~i~~~~~~~~d~~~~l~~~   98 (428)
T 3mqd_A           20 GSMRRVVVTGMGIVSSIGSNTEEVTASLREAKSGISRAEEYAELGFRCQVHGA-PDIDIESLVDRRAMRFHGRGTAWNHI   98 (428)
T ss_dssp             --CCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECHHHHHTTCSCCEEEC-CCCCHHHHSCTGGGTTCCHHHHHHHH
T ss_pred             CCCCCEEEEeeEEECCCcCCHHHHHHHHHcCCCcceeCCcccccCCCcccccc-cCCChhhcCCHHHHhhCCHHHHHHHH
Confidence            45689999999999999999999999999999999999888777888889888 47999988999999999999999999


Q ss_pred             HHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCcc
Q 024765          147 AGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPS  225 (263)
Q Consensus       147 aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~  225 (263)
                      ++++||+|||++++   +++..++|||+|++.+++...++++..+ ..+...++++.+++.+.+.++++|++.||++||+
T Consensus        99 aa~~Al~dAGl~~~---~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp~  175 (428)
T 3mqd_A           99 AMDQAIADAGLTEE---EVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFKIKGIN  175 (428)
T ss_dssp             HHHHHHHHHTCCHH---HHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHHHHTTCCSCE
T ss_pred             HHHHHHHHcCCChh---HccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHHHHcCCCCce
Confidence            99999999999864   4778999999999998888788887777 7788899999999999999999999999999999


Q ss_pred             ccccccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          226 YSISTACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       226 ~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      ++|+++|+||++||++|+++|++|+||++ ++|+|.
T Consensus       176 ~tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~  211 (428)
T 3mqd_A          176 YSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCED  211 (428)
T ss_dssp             ECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC
T ss_pred             eeecCccHHHHHHHHHHHHHHHcCCCCEEEEEeecc
Confidence            99999999999999999999999999965 566665

>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A

Probab=100.00  E-value=1.8e-36  Score=302.74  Aligned_cols=184  Identities=22%  Similarity=0.337  Sum_probs=159.1

Q ss_pred             CCcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeC-CCCCCCCC-CceeEEecCC---CCCCCC-CCHHHHhhcCHHHH
Q 024765           69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDI-QGFDCSEF-PTRIAAEIKS---LSTGGW-ISPKIAKKADKYLI  142 (263)
Q Consensus        69 ~~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~-~~~~~~~~-~~~~~g~i~~---fd~~~~-i~~~~~~~~d~~~~  142 (263)
                      +++||||||||++|+|.++++||++|.+|+++++++ ++|+...+ .....|++++   ||+.+| |+|+|++.|||+||
T Consensus         3 ~~~IaIvGmg~r~P~~~~~~~~W~~l~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~i~~~ea~~mDp~~r   82 (965)
T 3hhd_A            3 GEEVVIAGMSGKLPESENLQEFWDNLIGGVDMVTDDDRRWKAGLYGLPRRSGKLKDLSRFDASFFGVHPKQAHTMDPQLR   82 (965)
T ss_dssp             CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEECSSSSSCTTGGGCCSCEECCSCSSCCCTTTTTCCHHHHHTSCHHHH
T ss_pred             CCCEEEEeeeEECCCCCCHHHHHHHHHcCCCcccCCCcccccccccCcccccccCChhhcChhhcCCCHHHHhhcCHHHH
Confidence            478999999999999999999999999999999998 45664322 2344666665   999999 99999999999999


Q ss_pred             HHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCC
Q 024765          143 YALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWT  222 (263)
Q Consensus       143 l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~  222 (263)
                      |+++++|+||+|||++++   ++++.++|||+|++.++      +...+..+...+.++.+++...+.++++|++.|||+
T Consensus        83 L~leaa~eALedAGi~~~---~i~~~~~Gv~vG~~~~d------~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~  153 (965)
T 3hhd_A           83 LLLEVTYEAIVDGGINPD---SLRGTHTGVWVGVSGSE------TSEALSRDPETLVGYSMVGCQRAMMANRLSFFFDFR  153 (965)
T ss_dssp             HHHHHHHHHHHHTTCCGG---GGTTSCCEEEEEECCCH------HHHHHTSCTTTCCTHHHHHHSTTHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHcCCChH---HcCCceeEEEEeccchh------HHHHHhcCccccCcccccccccchHHHHHHHHhCCC
Confidence            999999999999999965   47889999999987643      223335667788889999999999999999999999


Q ss_pred             CccccccccchHHHHHHHHHHHHHHhcccceE-eeccCCC
Q 024765          223 GPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQAD  261 (263)
Q Consensus       223 Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~~  261 (263)
                      ||+++|++|||||++||++||++|++|+||++ ++|+|..
T Consensus       154 GPs~tvdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~  193 (965)
T 3hhd_A          154 GPSIALDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVL  193 (965)
T ss_dssp             SCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECC
T ss_pred             CCeeeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccc
Confidence            99999999999999999999999999999976 5566644

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=100.00  E-value=1.5e-36  Score=325.81  Aligned_cols=184  Identities=21%  Similarity=0.319  Sum_probs=159.6

Q ss_pred             CcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeC-CCCCCCCC-CceeEEecCC---CCCCCC-CCHHHHhhcCHHHHH
Q 024765           70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDI-QGFDCSEF-PTRIAAEIKS---LSTGGW-ISPKIAKKADKYLIY  143 (263)
Q Consensus        70 ~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~-~~~~~~~~-~~~~~g~i~~---fd~~~~-i~~~~~~~~d~~~~l  143 (263)
                      ++||||||||++|+|.++++||++|.+|++++++. +||+...+ ..+.+|++++   ||+.|| |+|+|++.||||||+
T Consensus         2 ~~iaI~G~~~~~p~~~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fd~~~f~i~~~ea~~~dpq~rl   81 (2512)
T 2vz8_A            2 EEVVIAGMSGKLPESENLEEFWANLIGGVDMVTADDRRWKAGLYGLPRRMGKLKDLSRFDASFFGVHSKQANTMDPQLRM   81 (2512)
T ss_dssp             CCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECSSSSCTTGGGCCSEEECCSCSSCCCTTTTTCCHHHHHTSCHHHHH
T ss_pred             CCEEEEeeeeeCCCCCCHHHHHHHHHcCCccccCCCcccccccccCcccceecCCcccCCHhhcCCCHHHHHhcCHHHHH
Confidence            68999999999999999999999999999999998 46775532 2456787765   999999 999999999999999


Q ss_pred             HHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCCC
Q 024765          144 ALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTG  223 (263)
Q Consensus       144 ~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G  223 (263)
                      +|+++||||||||+.+.   ++.+.|+|||+|++.+++      ...+..+...+.++.+++...+++++||+|+|||+|
T Consensus        82 ~l~~~~eAle~Ag~~~~---~~~~~~~gv~~G~~~~~~------~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~~~l~G  152 (2512)
T 2vz8_A           82 LLEVTYEAIVDGGINPA---SLRGTSTGVWVGVSSSDA------SEALSRDPETLVGYSMIGCQRAMMANRLSFFFDFKG  152 (2512)
T ss_dssp             HHHHHHHHHGGGTCCGG---GGTTCSCEEEEEECCCHH------HHHTTSCTTTSCGGGGGGTSTTHHHHHHHHHHTCCS
T ss_pred             HHHHHHHHHHHCCCChh---hcCCCCeEEEEEeccHHH------HHHHhcCccccCcceecccchhHHHHHHHHHhCCCC
Confidence            99999999999999854   478899999999986532      222345566788999999999999999999999999


Q ss_pred             ccccccccchHHHHHHHHHHHHHHhcccceEe-eccCCCC
Q 024765          224 PSYSISTACASSNYSILNATSHIIKGDTVSNS-PSSQADI  262 (263)
Q Consensus       224 p~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~v-~Gae~~i  262 (263)
                      |+++|+||||||++|||+||++||+|+||++| +|++..+
T Consensus       153 ps~tv~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~  192 (2512)
T 2vz8_A          153 PSITIDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLL  192 (2512)
T ss_dssp             CEEEEECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCC
T ss_pred             CceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeEecccc
Confidence            99999999999999999999999999999775 5555433

>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A

Probab=100.00  E-value=3.1e-37  Score=284.95  Aligned_cols=187  Identities=34%  Similarity=0.555  Sum_probs=166.6

Q ss_pred             CcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCCC--------------CCCCceeEEecC------CCCCCCCC
Q 024765           70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDC--------------SEFPTRIAAEIK------SLSTGGWI  129 (263)
Q Consensus        70 ~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~~--------------~~~~~~~~g~i~------~fd~~~~i  129 (263)
                      ++|||||||+++|+|.++++||++|++|+++|+++++|+.              ..++.+++++|+      +||+.+|+
T Consensus         1 ~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~fd~~~~~   80 (431)
T 2ix4_A            1 RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVAAFVPYGSNPGEFDEALWL   80 (431)
T ss_dssp             CCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCGGGGCCTTSCHHHHHHHHHTCSCCEEECCCBSSSTTSBCHHHHS
T ss_pred             CcEEEEeeeEECCCCCCHHHHHHHHHcCCCeeeeCChhhhhccccccccccccccCcccceeEEeccccccccCChhhcC
Confidence            3699999999999999999999999999999999988862              356788999998      69988777


Q ss_pred             CHHHHhhcCHHHHHHHHHHHHHHHHcCC-CCcccCcCCCCceEEEEeecCCChhhHHHHHHHH-HhccCCCCCccccccc
Q 024765          130 SPKIAKKADKYLIYALVAGKKALVDAGI-TEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSL  207 (263)
Q Consensus       130 ~~~~~~~~d~~~~l~l~aa~~Al~dAGl-~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  207 (263)
                      +++   .|||+++|+++++++||+|||+ +++   +++..|+|||+|++.+++..+++++..+ ..+.+.+.|+.+++.+
T Consensus        81 ~~~---~~d~~~~l~l~aa~~AL~dAG~~~~~---~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  154 (431)
T 2ix4_A           81 NSK---AVANFIGYAVCAADEALRDAEWLPTE---EEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKIL  154 (431)
T ss_dssp             CST---TCCHHHHHHHHHHHHHHHHTTCCCCS---HHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHC
T ss_pred             Chh---hCCHHHHHHHHHHHHHHHHcCCCCcc---ccCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcch
Confidence            776   8999999999999999999999 743   3556799999999999988888888777 6667788999999999


Q ss_pred             chHHHHHHHHHhCCCCccccccccchHHHHHHHHHHHHHHhcccceE-eeccCCCC
Q 024765          208 TNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQADI  262 (263)
Q Consensus       208 ~~~~a~~ia~~lgl~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~~i  262 (263)
                      .+.++++|++.||++||+++|+++|+||++||++|+++|++|+||++ |+|+|..+
T Consensus       155 ~~~~a~~ia~~lgl~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~  210 (431)
T 2ix4_A          155 VNMASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSI  210 (431)
T ss_dssp             TTHHHHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCC
T ss_pred             hHHHHHHHHHHHCCCCceeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeecccc
Confidence            99999999999999999999999999999999999999999999965 56667543

>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}

Probab=100.00  E-value=1.3e-35  Score=295.22  Aligned_cols=183  Identities=20%  Similarity=0.262  Sum_probs=156.9

Q ss_pred             CCcEEEEecceeCCcC-CCHHHHHHHHHcCCCceeeC--CC-CCCC-----------CCCceeEEecCC---CCCCCC-C
Q 024765           69 ERRIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDI--QG-FDCS-----------EFPTRIAAEIKS---LSTGGW-I  129 (263)
Q Consensus        69 ~~~VaItG~g~~~p~g-~~~~~~w~~L~~G~~~i~~~--~~-~~~~-----------~~~~~~~g~i~~---fd~~~~-i  129 (263)
                      .++||||||||++|+| .++++||++|.+|+++++++  +| |+..           ..+.+++|++++   ||+.+| |
T Consensus         5 ~~~iaIvG~~~~~P~g~~~~~~~w~~L~~g~~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~FD~~~f~i   84 (915)
T 2qo3_A            5 SDPIAIVSMACRLPGGVNTPQRLWELLREGGETLSGFPTDRGWDLARLHHPDPDNPGTSYVDKGGFLDDAAGFDAEFFGV   84 (915)
T ss_dssp             CCCEEEEEEEEECSTTCCSHHHHHHHHHTTCCCCEECCSSSCCCHHHHBCSCTTSTTCBSCCEEBCCSCSSEECHHHHTC
T ss_pred             CCCEEEEeeEEECCCCCCCHHHHHHHHHcCCCcccCCCccccCChhhccCcccccCCCcccceeEEeCCccccCHhhcCC
Confidence            4679999999999998 99999999999999999988  34 7532           235678999975   999999 9


Q ss_pred             CHHHHhhcCHHHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccch
Q 024765          130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTN  209 (263)
Q Consensus       130 ~~~~~~~~d~~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (263)
                      +|+|++.|||+++|+++++|+||+|||++++   +++..++|||+|++.+++....       .....++++.+++...+
T Consensus        85 ~~~ea~~mdp~~rL~leaa~eALedAGi~~~---~i~~~~~gV~vG~~~~~~~~~~-------~~~~~~~~~~~~g~~~~  154 (915)
T 2qo3_A           85 SPREAAAMDPQQRLLLETSWELVENAGIDPH---SLRGTATGVFLGVAKFGYGEDT-------AAAEDVEGYSVTGVAPA  154 (915)
T ss_dssp             CHHHHHTSCHHHHHHHHHHHHHHHHTTCCGG---GGTTBCCEEEEECCCCCTTTTC-------C---CTTCHHHHTTCHH
T ss_pred             CHHHHHhCCHHHHHHHHHHHHHHHHcCCChH---HcCCcceEEEEEecCchHHhhh-------ccccccccccccccccc
Confidence            9999999999999999999999999999964   4778999999999877664321       12345677888888899


Q ss_pred             HHHHHHHHHhCCCCccccccccchHHHHHHHHHHHHHHhcccceE-eeccCCC
Q 024765          210 MASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQAD  261 (263)
Q Consensus       210 ~~a~~ia~~lgl~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~~  261 (263)
                      .++++|++.||++||+++|+++|+||++||++||++|++|+||++ ++|+|..
T Consensus       155 ~~a~ris~~lgl~Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~  207 (915)
T 2qo3_A          155 VASGRISYTMGLEGPSISVDTACSSSLVALHLAVESLRKGESSMAVVGGAAVM  207 (915)
T ss_dssp             HHHHHHHHHHTBCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECC
T ss_pred             HHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhh
Confidence            999999999999999999999999999999999999999999965 5666643

>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}

Probab=100.00  E-value=5.6e-35  Score=290.81  Aligned_cols=182  Identities=20%  Similarity=0.220  Sum_probs=156.4

Q ss_pred             CcEEEEecceeCCcC-CCHHHHHHHHHcCCCceeeC--CC-CCCCCCCceeEEecCC---CCCCCC-CCHHHHhhcCHHH
Q 024765           70 RRIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDI--QG-FDCSEFPTRIAAEIKS---LSTGGW-ISPKIAKKADKYL  141 (263)
Q Consensus        70 ~~VaItG~g~~~p~g-~~~~~~w~~L~~G~~~i~~~--~~-~~~~~~~~~~~g~i~~---fd~~~~-i~~~~~~~~d~~~  141 (263)
                      ++|||||||+++|+| .++++||++|.+|+++|+++  +| |+. +...+++|++++   ||+.+| |+|+|++.|||++
T Consensus        39 ~~iaIvG~~~~~Pgg~~~~~~~w~~L~~g~~~i~~~p~~r~~~~-~~~~~~~~~l~~~~~fD~~~f~i~~~ea~~mdp~~  117 (917)
T 2hg4_A           39 EPIAIVGMACRFPGDVDSPESFWEFVSGGGDAIAEAPADRGWEP-DPDARLGGMLAAAGDFDAGFFGISPREALAMDPQQ  117 (917)
T ss_dssp             CCEEEEEEEEEBTTTBCSHHHHHHHHHTTCCCCEECCGGGCCCC-CSSCCEEBCCTTTTEECTGGGTCCHHHHHHSCHHH
T ss_pred             CCEEEEeceEECCCCCCCHHHHHHHHHcCCCccccCCcccccCC-CCCcceeeEecCccccChhhcCCCHHHHHhcCHHH
Confidence            679999999999987 78999999999999999987  44 543 344788999974   999999 9999999999999


Q ss_pred             HHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCC
Q 024765          142 IYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGW  221 (263)
Q Consensus       142 ~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl  221 (263)
                      +|+++++|+||+|||+.++   ++++.++|||+|++.+++...      +......+.++.+++...+.++++|++.|||
T Consensus       118 rl~leaa~eALedAGi~~~---~i~~~~~gV~vG~~~~d~~~~------~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl  188 (917)
T 2hg4_A          118 RIMLEISWEALERAGHDPV---SLRGSATGVFTGVGTVDYGPR------PDEAPDEVLGYVGTGTASSVASGRVAYCLGL  188 (917)
T ss_dssp             HHHHHHHHHHHHHTTCCGG---GGTTSCEEEEEEECCCCCSCC------TTSSCGGGGGGHHHHHCHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHcCCChH---HcCCcceEEEEEeCCchhhhh------hhcCccccCcccccccccchHHHHHHHhcCC
Confidence            9999999999999999964   477899999999987654421      1233445677778888889999999999999


Q ss_pred             CCccccccccchHHHHHHHHHHHHHHhcccceEe-eccCCC
Q 024765          222 TGPSYSISTACASSNYSILNATSHIIKGDTVSNS-PSSQAD  261 (263)
Q Consensus       222 ~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~v-~Gae~~  261 (263)
                      +||+++|+++|+||++||++||++|++|+||++| +|+|..
T Consensus       189 ~Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~  229 (917)
T 2hg4_A          189 EGPAMTVDTACSSGLTALHLAMESLRRDECGLALAGGVTVM  229 (917)
T ss_dssp             CSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECC
T ss_pred             CCCeEeecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccc
Confidence            9999999999999999999999999999999765 555543

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.93  E-value=5.3e-27  Score=242.64  Aligned_cols=178  Identities=22%  Similarity=0.250  Sum_probs=149.8

Q ss_pred             CcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecC-CCCCCCC-CCHHHHhhcCHHHHHHHHH
Q 024765           70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIK-SLSTGGW-ISPKIAKKADKYLIYALVA  147 (263)
Q Consensus        70 ~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~-~fd~~~~-i~~~~~~~~d~~~~l~l~a  147 (263)
                      .+|+|++       ..+.++||++|.+|++++.+..    ..++.+++|+|+ +||+.+| |++++++.|||+++|++++
T Consensus      1150 ~~~~I~~-------~~~~~~~w~~L~~G~~~i~p~~----~~~~~~~aG~i~~~FD~~~fgI~~~ea~~mDp~~~l~L~a 1218 (1887)
T 2uv8_A         1150 DKVDIFE-------IPETGEYSVKLLKGATLYIPKA----LRFDRLVAGQIPTGWNAKTYGISDDIISQVDPITLFVLVS 1218 (1887)
T ss_dssp             GGEEEEE-------CTTTSCEEEEECTTCEEEEEEE----ECCSCCEEECCCTTCCTTTTTCCHHHHHHSCHHHHHHHHH
T ss_pred             CceeEee-------cCchHHHHHHHHcCCceeeccc----CCCCccEEEEECCCCChhhcCCCHHHHHhcCHHHHHHHHH
Confidence            5677875       3467899999999999999862    245678999997 7999999 9999999999999999999


Q ss_pred             HHHHHHHcCCC-Cccc-CcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHH-hCCCCc
Q 024765          148 GKKALVDAGIT-EQVS-GELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMD-LGWTGP  224 (263)
Q Consensus       148 a~~Al~dAGl~-~~~~-~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~-lgl~Gp  224 (263)
                      +++||+||||. +..+ ..++..++|||+|++.|++..+...|...... ..+.++.+..++.|.++++|+++ ||++||
T Consensus      1219 a~eAL~dAGi~dp~e~~~~i~~s~vGv~vGs~~gg~~~~~~~~~~~~~~-~~v~~~~~~~~~~n~~aa~is~~~lgl~GP 1297 (1887)
T 2uv8_A         1219 VVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKD-EPVQNDILQESFINTMSAWVNMLLISSSGP 1297 (1887)
T ss_dssp             HHHHHHHTTCSSGGGHHHHSCGGGEEECCEESSCCHHHHHHHHTTTTTT-CCCCTTHHHHHSTTHHHHHHHHHTTCCCSC
T ss_pred             HHHHHHHcCCCChhhhhcccCCceeEEEeccCCccHHHHHHHHHHHHhc-CCCCcchhhcchhhHHHHHHHHHHcCCccc
Confidence            99999999995 4210 12678899999999999998777766644111 23677888888999999999995 999999


Q ss_pred             cccccccchHHHHHHHHHHHHHHhcccceEeeccC
Q 024765          225 SYSISTACASSNYSILNATSHIIKGDTVSNSPSSQ  259 (263)
Q Consensus       225 ~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~v~Gae  259 (263)
                      +++|++||+||++||++||++|++|+||++|+|+-
T Consensus      1298 ~~tv~tACASsl~Al~~A~~~I~sG~advaLvGGv 1332 (1887)
T 2uv8_A         1298 IKTPVGACATSVESVDIGVETILSGKARICIVGGY 1332 (1887)
T ss_dssp             CCCCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEE
T ss_pred             eEEeecccccHHHHHHHHHHHHHcCCCCEEEEeee
Confidence            99999999999999999999999999997765543

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.93  E-value=6.1e-27  Score=241.74  Aligned_cols=181  Identities=22%  Similarity=0.269  Sum_probs=151.0

Q ss_pred             CcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecC-CCCCCCC-CCHHHHhhcCHHHHHHHHH
Q 024765           70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIK-SLSTGGW-ISPKIAKKADKYLIYALVA  147 (263)
Q Consensus        70 ~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~-~fd~~~~-i~~~~~~~~d~~~~l~l~a  147 (263)
                      .+|.|+.       ..+.++||++|.+|++++.+..    ..++.+++|+|+ +||+.+| |++++++.|||+++|+|++
T Consensus      1125 ~~~~i~~-------~~~~~~~w~~L~~G~~~i~p~~----~~~~~~~aG~i~~~FD~~~fgI~~~ea~~mDp~~~l~L~a 1193 (1878)
T 2uv9_A         1125 DKVEIFE-------IPETGQYTVRLRKGATLLIPKA----LQFDRLVAGQIPTGWDARRYGVPEDIIQQVDPVTLYVLVS 1193 (1878)
T ss_dssp             GGEEEEE-------CTTTSCEEEEECTTCEEEEEEE----ECCSCCEEEECCTTCCHHHHTCCHHHHHHSCHHHHHHHHH
T ss_pred             CCeeEee-------CCChHHHHHHHHcCCCeeeecC----CCCcceEEEEeCCCCCHhhcCCCHHHHHhcCHHHHHHHHH
Confidence            5677763       4567899999999999999852    245678999997 6999999 9999999999999999999


Q ss_pred             HHHHHHHcCCC-Cccc-CcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHH-hCCCCc
Q 024765          148 GKKALVDAGIT-EQVS-GELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMD-LGWTGP  224 (263)
Q Consensus       148 a~~Al~dAGl~-~~~~-~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~-lgl~Gp  224 (263)
                      +++||+||||+ |..+ +.++..++|||+|++.|++..+...|.....+ ..+.++.+.+++.|.++++|+++ ||++||
T Consensus      1194 a~eAL~~AGi~~p~e~~~~i~~s~vGv~vGsg~gg~~~~~~~~~~~~~~-~~v~~~~~~~~~~n~~aa~vs~~~lg~~GP 1272 (1878)
T 2uv9_A         1194 VAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYLD-KPVQKDILQESFVNTMAAWVNMLLLSSTGP 1272 (1878)
T ss_dssp             HHHHHHTTTCSSGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHTTTTTT-CCCCSCTTGGGSHHHHHHHHHHHTCCCCCC
T ss_pred             HHHHHHHCCCCChhhhhcccCccceEEEEccCCccHHHHHHHHHHHHhc-CCCCchhhhcchHHHHHHHHHHHhcCCCCC
Confidence            99999999997 4310 12578899999999999998777766644111 23778888889999999999994 999999


Q ss_pred             cccccccchHHHHHHHHHHHHHHhcccceEeeccCCCC
Q 024765          225 SYSISTACASSNYSILNATSHIIKGDTVSNSPSSQADI  262 (263)
Q Consensus       225 ~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~v~Gae~~i  262 (263)
                      +++|++||+||+.||++||+.|++|+||++|+|+-..+
T Consensus      1273 ~~tv~tACASsl~Al~~A~~~I~sG~advalvGGvd~~ 1310 (1878)
T 2uv9_A         1273 IKTPVGACATAVESLDVGYDTIMQGKARVCLVGGFDDF 1310 (1878)
T ss_dssp             BCCBCCGGGHHHHHHHHHHHHHTTTSCSEEEEEEEECC
T ss_pred             eEEEcCcchHHHHHHHHHHHHHHcCCCCEEEEeeeccC
Confidence            99999999999999999999999999997755543334

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.92  E-value=3.1e-27  Score=238.05  Aligned_cols=173  Identities=24%  Similarity=0.265  Sum_probs=145.9

Q ss_pred             CCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecC-CCCCCCC-CCHHHHhhcCHHHHHHHHHHHHHHHHcCCC-Ccc
Q 024765           85 DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIK-SLSTGGW-ISPKIAKKADKYLIYALVAGKKALVDAGIT-EQV  161 (263)
Q Consensus        85 ~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~-~fd~~~~-i~~~~~~~~d~~~~l~l~aa~~Al~dAGl~-~~~  161 (263)
                      .+.++||++|.+|++++.+.    ...++.+++|+|+ +||+.+| |++++++.|||+++|+++++++||+|||++ |..
T Consensus       959 ~~~eefW~~L~~G~~~i~p~----~~~~~~~vaG~Ip~gFD~~~fGIs~~ea~~mDP~qrLaLeAa~EALedAGI~dP~e 1034 (1688)
T 2pff_A          959 PETGEYSVKLLKGATLYIPK----ALRFDRLVAGQIPTGWNAKTYGISDDIISQVDPITLFVLVSVVEAFIASGITDPYE 1034 (1688)
T ss_dssp             CCCCSSSCCCCCCTTCCCCC----CCCEECCSSCSCCCCCCCCCSSCCTTTBTTBCSSTTHHHHHHHHHHTTTTCSSGGG
T ss_pred             CCHHHHHHHHHcCCCEEecC----CCCCCceEEEEECCCCChhhCCCCHHHHhccCHHHHHHHHHHHHHHHHcCCCChHH
Confidence            46789999999999999884    3345678899997 6999999 999999999999999999999999999997 432


Q ss_pred             -cCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHH-HhCCCCccccccccchHHHHHH
Q 024765          162 -SGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAM-DLGWTGPSYSISTACASSNYSI  239 (263)
Q Consensus       162 -~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~-~lgl~Gp~~tv~tACsSsl~Al  239 (263)
                       ...++..++|||+|++.+++..+...+..... ...+.++.+...+.|.++++|++ +||++||+++|++||+||++||
T Consensus      1035 i~~~i~~s~vGV~vGSg~Gg~~~l~~~~~~~~~-~~~v~~~~l~~~~~nt~Aa~Vs~~~LGl~GPs~TVdtACASSL~AL 1113 (1688)
T 2pff_A         1035 MYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFK-DEPVQNDILQESFINTMSAWVNMLLISSSGPIKTPVGACATSVESV 1113 (1688)
T ss_dssp             GGGGTCCSCSCCCCCCCSCCCSSHHHHHHSSSS-CCCCCSTTHHHHCTHHHHHHHHHSSCCCCCCCCCCCCTTTTTHHHH
T ss_pred             hccccCCceEEEEecccCCCHHHHHHHHHHHHh-cCCCCcchhccccHHHHHHHHHHHHcCCcCCeEEecCCCchHHHHH
Confidence             11367899999999999999877777664411 12367777888889999999999 7999999999999999999999


Q ss_pred             HHHHHHHHhcccceEeeccCCCC
Q 024765          240 LNATSHIIKGDTVSNSPSSQADI  262 (263)
Q Consensus       240 ~~A~~~Lr~G~~d~~v~Gae~~i  262 (263)
                      ++||++|++|+||++|+|+-..+
T Consensus      1114 ~lA~~aIrsGeaDvaLVGGvE~m 1136 (1688)
T 2pff_A         1114 DIGVETILSGKARICIVGGYDDF 1136 (1688)
T ss_dssp             HHHHHHHHTTTCSCBCCCCCCCC
T ss_pred             HHHHHHHHCCCCCEEEEeeeccC
Confidence            99999999999997755543333

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.91  E-value=9.1e-25  Score=235.13  Aligned_cols=148  Identities=20%  Similarity=0.300  Sum_probs=126.3

Q ss_pred             CCceeEEecC-CCCCCCC-CCHHHHhhcCHHHHHHHHHHHHHHHHcCCCCcccC-cCCCCceEEEEeecCCChhhHHHHH
Q 024765          112 FPTRIAAEIK-SLSTGGW-ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSG-ELDKSRCGVIIGSAMGGLRVLNDGF  188 (263)
Q Consensus       112 ~~~~~~g~i~-~fd~~~~-i~~~~~~~~d~~~~l~l~aa~~Al~dAGl~~~~~~-~~~~~r~gv~vG~~~g~~~~~~~~~  188 (263)
                      ++.+++|+|+ +||+.+| |++++++.|||+++|+++++++||+|||++++.+. ..+..++|||+|++.|++...++.|
T Consensus      2617 ~~~~~gG~i~d~FD~~~fgIs~rea~~mDp~~rL~l~aa~eALedAGi~p~~l~~~~~~~~vGV~vG~~~gg~~~~~~~~ 2696 (3089)
T 3zen_D         2617 LSRTVGAQIPTGFDPTVWGISPDMASSIDRVALWNIVATVDAFLSSGFTPTELMRWVHPSQVASTQGTGMGGMTSMQTMY 2696 (3089)
T ss_dssp             CSCCEEECCCTTCCTTTTTCCHHHHHHSCHHHHHHHHHHHHHHTTSCSCGGGHHHHSCGGGEEEEEEESSCCHHHHHHHH
T ss_pred             ccceEEEEcCCCCChhhcCCCHHHHHhcCHHHHHHHHHHHHHHHHcCCCHHHhhcccCcceeEEEEeecCccHHHHHHHH
Confidence            5788999995 6999999 99999999999999999999999999999975431 2367899999999999998888888


Q ss_pred             HHHHhccCCCCCcccccccchHHHHHHHHH-hCCCCccccccccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          189 EAIKVSYKKMSPFYIPYSLTNMASAVLAMD-LGWTGPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~-lgl~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      ..+..+....++ .++..+.+.+++++++. ||++||+++|++||+||++||++||++|++|+||++ ++|+|.
T Consensus      2697 ~~~~~~~~~~~~-~~~~~~~~~~aa~is~~~lGl~GPs~tV~tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~ 2769 (3089)
T 3zen_D         2697 HGNLLGRAKPND-ILQEVLPNVVAAHVMQSYVGGYGAMVHPVGACATAAVSVEEGVDKIKLGKADLVIAGGFDD 2769 (3089)
T ss_dssp             HHHHTTCCCCTT-HHHHTSTTHHHHHHHHHTTCCCSCEECCBCTTCHHHHHHHHHHHHHHTTSCSEEEEEEEEC
T ss_pred             HHHhcCCCccch-hhccccccHHHHHHHHHHcCCCCCceeeccchhhHHHHHHHHHHHHHCCCCCeeEEeeecc
Confidence            776334444443 46677889999999975 599999999999999999999999999999999976 556654

>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}

Probab=99.57  E-value=5.2e-15  Score=133.69  Aligned_cols=148  Identities=14%  Similarity=0.036  Sum_probs=109.4

Q ss_pred             CcEEEEecceeCCcC-CCHHHHHHHHHcCC----------------CceeeCCCCCCCCCCceeEEecCCCCCCCC-CCH
Q 024765           70 RRIVVTGLGAVTPLG-DDAHLFHTSLLEGV----------------TGISDIQGFDCSEFPTRIAAEIKSLSTGGW-ISP  131 (263)
Q Consensus        70 ~~VaItG~g~~~p~g-~~~~~~w~~L~~G~----------------~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~-i~~  131 (263)
                      .+|.|+|+|+.+|.. .+.++||+.+....                .+|++. ++...+         -.||+.+| +++
T Consensus        12 ~~v~I~g~g~~~P~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R-~~~~~~---------~~~~~~~~~~~~   81 (374)
T 2h84_A           12 NNSFVLGIGISVPGEPISQQSLKDSISNDFSDKAETNEKVKRIFEQSQIKTR-HLVRDY---------TKPENSIKFRHL   81 (374)
T ss_dssp             CCCEEEEEEEECSSSCEEHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCCCEE-CCSSCT---------TSGGGCGGGGGG
T ss_pred             CCeEEEEEEEeCCCcccCHHHHHHHHHHhhccChHHHHHHHHHHHhCCcCcc-eeecCc---------cccccccccCCh
Confidence            368999999999987 67899999875421                222211 010000         13677776 566


Q ss_pred             HHHhhc-----CHHHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccc
Q 024765          132 KIAKKA-----DKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYS  206 (263)
Q Consensus       132 ~~~~~~-----d~~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (263)
                      .+...+     ++...|+++++++||++||++++.++       +|++|++.+                     +.    
T Consensus        82 ~~~~~~~~~~~~~~~~la~~Aa~~al~~ag~~~~~id-------~vi~~t~~~---------------------~~----  129 (374)
T 2h84_A           82 ETITDVNNQFKKVVPDLAQQACLRALKDWGGDKGDIT-------HIVSVTSTG---------------------II----  129 (374)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC-------EEEEEESSC---------------------CC----
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeeCC---------------------CC----
Confidence            665555     88999999999999999999865422       678887631                     11    


Q ss_pred             cchHHHHHHHHHhCCCC--cccccc-ccchHHHHHHHHHHHHHHhcccce-EeeccCC
Q 024765          207 LTNMASAVLAMDLGWTG--PSYSIS-TACASSNYSILNATSHIIKGDTVS-NSPSSQA  260 (263)
Q Consensus       207 ~~~~~a~~ia~~lgl~G--p~~tv~-tACsSsl~Al~~A~~~Lr~G~~d~-~v~Gae~  260 (263)
                      . ...+.+|+..||+++  |++.|+ ++|+|+++||++|+++|+.|.+|. +|+|+|.
T Consensus       130 ~-p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~al~~A~~~i~~g~~~~vLv~g~e~  186 (374)
T 2h84_A          130 I-PDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVCTEV  186 (374)
T ss_dssp             S-SCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHTTCTTCEEEEEEEEC
T ss_pred             C-CcHHHHHHHHcCcCCCCceEEecCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEEe
Confidence            1 135889999999998  899996 899999999999999999999985 5677774

>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2

Probab=99.56  E-value=2.5e-15  Score=134.06  Aligned_cols=141  Identities=19%  Similarity=0.231  Sum_probs=99.3

Q ss_pred             CCCCcEEEEecceeCCcC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHH
Q 024765           67 PKERRIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYAL  145 (263)
Q Consensus        67 ~~~~~VaItG~g~~~p~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l  145 (263)
                      +.+++|.|+|+|+.+|.. .+.+++|+.+......|.  ++.   +...+.   +        .     ...++..+|++
T Consensus         7 ~~~~~~~I~gig~~~P~~~~~~~~~~~~~~~~~~~i~--~~~---Gi~~R~---~--------~-----~~~~~~~~la~   65 (339)
T 1mzj_A            7 PERRFSRVLGVGSYRPRREVSNKEVCTWIDSTEEWIE--TRT---GIRSRR---I--------A-----EPDETIQVMGV   65 (339)
T ss_dssp             CCCCEEEEEEEEEECCSCEEEHHHHTTTSSCCHHHHH--HHH---CCSEEE---C--------C-----CTTCCHHHHHH
T ss_pred             CccCceEEEEEEEeCCCccccHHHHHHHhCCCHHHHH--Hhc---CceEEE---E--------e-----CCCCCHHHHHH
Confidence            345679999999999988 577888765421100000  000   000010   0        0     01245789999


Q ss_pred             HHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCC-Cc
Q 024765          146 VAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWT-GP  224 (263)
Q Consensus       146 ~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-Gp  224 (263)
                      +++++||++||++++.   ++    +|++|++.++.                        ..+ ..+.+|++.||++ +|
T Consensus        66 ~Aa~~al~~ag~~~~~---id----~vi~gt~~~~~------------------------~~p-~~a~~v~~~lgl~~~~  113 (339)
T 1mzj_A           66 AASRRALEHAGVDPAE---ID----LVVVSTMTNFV------------------------HTP-PLSVAIAHELGADNAG  113 (339)
T ss_dssp             HHHHHHHHHHTCCGGG---CC----EEEEECSCCCC------------------------CSS-CHHHHHHHHHTCTTCE
T ss_pred             HHHHHHHHHcCCCHHH---CC----EEEEEecCCCC------------------------CCC-hHHHHHHHHhCCCCcc
Confidence            9999999999998643   22    78999864321                        112 2688999999998 79


Q ss_pred             cccccccchHHHHHHHHHHHHHHhcccce-EeeccCC
Q 024765          225 SYSISTACASSNYSILNATSHIIKGDTVS-NSPSSQA  260 (263)
Q Consensus       225 ~~tv~tACsSsl~Al~~A~~~Lr~G~~d~-~v~Gae~  260 (263)
                      +++|+++|+|++.||+.|+++|+.|++|. +|+|+|.
T Consensus       114 ~~~v~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~  150 (339)
T 1mzj_A          114 GFDLSAACAGFCHALSIAADAVESGGSRHVLVVATER  150 (339)
T ss_dssp             EEEEECGGGHHHHHHHHHHHHHHHSSCSCEEEEEEEE
T ss_pred             EEEccccchHHHHHHHHHHHHHHCCCCCEEEEEEEcc
Confidence            99999999999999999999999999985 5677774

>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}

Probab=99.51  E-value=4.9e-15  Score=148.88  Aligned_cols=155  Identities=14%  Similarity=0.050  Sum_probs=109.8

Q ss_pred             CCCCcEEEEecceeCCcC-------------CCHHHHHHHH------HcCCCceeeCCCCCCCCCCceeEEecCCCCCCC
Q 024765           67 PKERRIVVTGLGAVTPLG-------------DDAHLFHTSL------LEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG  127 (263)
Q Consensus        67 ~~~~~VaItG~g~~~p~g-------------~~~~~~w~~L------~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~  127 (263)
                      +.+.++.|+|+|..+|.+             .+.+++|+.+      ..++++|++...++..++...      +|++..
T Consensus       599 ~~~~~~~I~g~g~~~P~~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~sGI~~r~~~~~~~~~~~------~~~~~~  672 (979)
T 3tsy_A          599 RAKGPATILAIGTATPDHCVYQSDYADYYFKVTKSEHMTALKKKFNRICDKSMIKKRYIHLTEEMLEE------HPNIGA  672 (979)
T ss_dssp             SCCSCEEEEEEEEECCSCEEEHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTCCCEEECSCCHHHHHH------CHHHHS
T ss_pred             cccCCceeecccCCCCCCccCHHHHHHHHHHhccccchHHHHHHHHHHHHhcCcceeeEecChhhhhc------Cccccc
Confidence            345689999999999998             4444555555      456677766544432222111      122222


Q ss_pred             C----CCHHHHhhcCHHHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCccc
Q 024765          128 W----ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYI  203 (263)
Q Consensus       128 ~----i~~~~~~~~d~~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~  203 (263)
                      +    +..++.+.+.....|+++|+++||++||++++.++       .|+++++.+                        
T Consensus       673 ~~~~~~~~r~~~~~~~~~~la~~Aa~~AL~~agl~~~dId-------~ii~~t~~~------------------------  721 (979)
T 3tsy_A          673 YMAPSLNIRQEIITAEVPKLGKEAALKALKEWGQPKSKIT-------HLVFCTTSG------------------------  721 (979)
T ss_dssp             SSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC-------EEEEEESSC------------------------
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCC-------EEEEEeeCC------------------------
Confidence            2    34555556666788999999999999999865432       467776421                        


Q ss_pred             ccccchHHHHHHHHHhCCCCcc---ccccccchHHHHHHHHHHHHHHhcccc-eEeeccCC
Q 024765          204 PYSLTNMASAVLAMDLGWTGPS---YSISTACASSNYSILNATSHIIKGDTV-SNSPSSQA  260 (263)
Q Consensus       204 ~~~~~~~~a~~ia~~lgl~Gp~---~tv~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~  260 (263)
                        ......+..|+..||++++.   +.+++||+|+++||..|+++|++|.+| ++|+|+|.
T Consensus       722 --~~~p~~a~~v~~~lGl~~~~~~~~~v~~aCsg~~~Al~~A~~~i~sG~~~~vLvvg~e~  780 (979)
T 3tsy_A          722 --VEMPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSEI  780 (979)
T ss_dssp             --CCSSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEEC
T ss_pred             --CCCCcHHHHHHHHcCCCcccEEEeeeccccHhHHHHHHHHHHHHHhCCCCEEEEEEEEe
Confidence              11125688999999999755   999999999999999999999999998 56788885

>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*

Probab=99.49  E-value=2e-14  Score=126.86  Aligned_cols=137  Identities=17%  Similarity=0.207  Sum_probs=96.0

Q ss_pred             cEEEEecceeCCcC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHHH
Q 024765           71 RIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGK  149 (263)
Q Consensus        71 ~VaItG~g~~~p~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa~  149 (263)
                      +|.|+|+|+..|.. .+.+++++.+..-...|.  ++   .+...+.   +             ....++..+|++++++
T Consensus         2 ~~~I~~~g~~~P~~~~~~~~~~~~~~~~~~~i~--~~---~Gi~~r~---~-------------~~~~~~~~~l~~~a~~   60 (317)
T 1hnj_A            2 YTKIIGTGSYLPEQVRTNADLEKMVDTSDEWIV--TR---TGIRERH---I-------------AAPNETVSTMGFEAAT   60 (317)
T ss_dssp             EEEEEEEEEECCSEEEEHHHHHTTSSCCHHHHH--HH---HCCCEEE---E-------------CCTTCCHHHHHHHHHH
T ss_pred             CcEEEEEEEeCCCceecHHHHHHHhCCCHHHHH--HH---hCceEEE---e-------------cCCCCCHHHHHHHHHH
Confidence            58899999999987 567777754321000000  00   0011111   0             0123457899999999


Q ss_pred             HHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCC-Cccccc
Q 024765          150 KALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWT-GPSYSI  228 (263)
Q Consensus       150 ~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-Gp~~tv  228 (263)
                      +||++||++++.   ++    +|++|++...                         .....++.+|++.||++ +|+++|
T Consensus        61 ~al~~ag~~~~~---id----~vi~g~~~~~-------------------------~~~~~~a~~v~~~lgl~~~~~~~v  108 (317)
T 1hnj_A           61 RAIEMAGIEKDQ---IG----LIVVATTSAT-------------------------HAFPSAACQIQSMLGIKGCPAFDV  108 (317)
T ss_dssp             HHHHHHTCCGGG---CC----EEEEECSCCS-------------------------CSSSCHHHHHHHHHTCCSSCEEEE
T ss_pred             HHHHHcCCCHHH---CC----EEEEEcCCCC-------------------------CCCCcHHHHHHHHhCCCCCeEEee
Confidence            999999998643   22    7888876421                         11124689999999998 999999


Q ss_pred             cccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          229 STACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       229 ~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      +++|+|++.||+.|+++|+.|++|.+ |+|+|.
T Consensus       109 ~~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~  141 (317)
T 1hnj_A          109 AAACAGFTYALSVADQYVKSGAVKYALVVGSDV  141 (317)
T ss_dssp             CCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC
T ss_pred             CcccHHHHHHHHHHHHHHHCCCCCEEEEEEech
Confidence            99999999999999999999999855 666664

>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A

Probab=99.47  E-value=3.3e-14  Score=126.29  Aligned_cols=139  Identities=20%  Similarity=0.225  Sum_probs=98.1

Q ss_pred             CCCcEEEEecceeCCcC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHH-hhcCHHHHHHH
Q 024765           68 KERRIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIA-KKADKYLIYAL  145 (263)
Q Consensus        68 ~~~~VaItG~g~~~p~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~-~~~d~~~~l~l  145 (263)
                      .|.+|.|+|+|+..|.. .+.+++|+.+...       +.|-..    +.+           |..+.. ...++...|++
T Consensus         9 ~m~~~~I~g~g~~~P~~~~~~~~~~~~~~~~-------~~~i~~----~~g-----------i~~r~~~~~~~~~~~la~   66 (335)
T 1u6e_A            9 GARSVGLLSVGAYRPERVVTNDEICQHIDSS-------DEWIYT----RTG-----------IKTRRFAADDESAASMAT   66 (335)
T ss_dssp             CCSCEEEEEEEEECCSEEEEHHHHTTSSSCC-------HHHHHH----HHC-----------CSEEEECCTTCCHHHHHH
T ss_pred             CCCceEEEEEEEECCCceecHHHHHHHhCCC-------HHHHHH----hcC-----------CceEeecCCCCCHHHHHH
Confidence            35679999999999987 5777777643211       011000    000           111110 01245689999


Q ss_pred             HHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCC-Cc
Q 024765          146 VAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWT-GP  224 (263)
Q Consensus       146 ~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-Gp  224 (263)
                      +++++||+|||++++.   ++    +|++|+..+++                    .     ....+.+|+..||++ +|
T Consensus        67 ~A~~~al~~ag~~~~~---id----~vi~~t~~~~~--------------------~-----~~~~a~~v~~~lgl~~~~  114 (335)
T 1u6e_A           67 EACRRALSNAGLSAAD---ID----GVIVTTNTHFL--------------------Q-----TPPAAPMVAASLGAKGIL  114 (335)
T ss_dssp             HHHHHHHHHHTCCGGG---CC----EEEEECSCCCC--------------------S-----SSCHHHHHHHHHTCTTSE
T ss_pred             HHHHHHHHHcCCCHHH---CC----EEEEEcCCCCC--------------------C-----CChHHHHHHHHhCCCCCc
Confidence            9999999999998653   22    78998864311                    0     114688999999998 69


Q ss_pred             cccccccchHHHHHHHHHHHHHHhcccc-eEeeccCC
Q 024765          225 SYSISTACASSNYSILNATSHIIKGDTV-SNSPSSQA  260 (263)
Q Consensus       225 ~~tv~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~  260 (263)
                      +++|+++|+|++.||++|+++|++|++| ++|+|+|.
T Consensus       115 ~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLv~g~e~  151 (335)
T 1u6e_A          115 GFDLSAGAAGFGYALGAAADMIRGGGAATMLVVGTEK  151 (335)
T ss_dssp             EEEEECGGGHHHHHHHHHHHHHHHTSCSSEEEEEEEE
T ss_pred             EeeeccccHHHHHHHHHHHHHHHcCCCCEEEEEEEcc
Confidence            9999999999999999999999999998 55777774

>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2

Probab=99.47  E-value=5.2e-14  Score=127.58  Aligned_cols=155  Identities=14%  Similarity=0.040  Sum_probs=106.5

Q ss_pred             EEEEecceeCCcC-CCHHHHHHHHHcCCCceeeCCCC-----CCCCCCcee-EEecCCCCCCCCCCHHHHhhcCHHHHHH
Q 024765           72 IVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGF-----DCSEFPTRI-AAEIKSLSTGGWISPKIAKKADKYLIYA  144 (263)
Q Consensus        72 VaItG~g~~~p~g-~~~~~~w~~L~~G~~~i~~~~~~-----~~~~~~~~~-~g~i~~fd~~~~i~~~~~~~~d~~~~l~  144 (263)
                      +.|+|+|+.+|.. .+.++||+.+......... .+|     ...+...+. ....+.|+..+-+++++....++...|+
T Consensus        10 ~~I~gig~~~P~~~v~~~~l~~~~~~~~~~~~~-~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~~~r~~~~~~~~~~la   88 (382)
T 1u0m_A           10 ATLCRPSVSVPEHVITMEETLELARRRHTDHPQ-LPLALRLIENTGVRTRHIVQPIEDTLEHPGFEDRNKVYEREAKSRV   88 (382)
T ss_dssp             CEECCCEEECCSEEEEHHHHHHHHHHHHTTCTT-HHHHHHHHHHTCCCEEEESSCHHHHTSCCCHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEEEeCCCcccCHHHHHHHHHHhccChhh-HHHHHHHHHhcCCCcceeecChhhhccCCChhHHHHHHHHHHHHHH
Confidence            7899999999987 6889999887543100000 000     001111111 1011124422226677777778889999


Q ss_pred             HHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCCC-
Q 024765          145 LVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTG-  223 (263)
Q Consensus       145 l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-  223 (263)
                      ++++++||+++|++++.++       .|++|+..+                     +.    . ...+.+|+..||++| 
T Consensus        89 ~~Aa~~aL~~agl~~~~id-------~vi~~t~~~---------------------~~----~-p~~a~~v~~~lGl~~~  135 (382)
T 1u0m_A           89 PAVIQRALDDAELLATDID-------VIIYVSCTG---------------------FM----M-PSLTAWLINEMGFDST  135 (382)
T ss_dssp             HHHHHHHHHHHTCCGGGCS-------EEEEECSSS---------------------CC----S-SCHHHHHHHHTTCCTT
T ss_pred             HHHHHHHHHHhCCCHHHCC-------EEEEEecCC---------------------CC----C-CcHHHHHHHHhCCCCC
Confidence            9999999999999864322       567776531                     11    1 235789999999998 


Q ss_pred             -ccccc-cccchHHHHHHHHHHHHHHhcccce-EeeccCC
Q 024765          224 -PSYSI-STACASSNYSILNATSHIIKGDTVS-NSPSSQA  260 (263)
Q Consensus       224 -p~~tv-~tACsSsl~Al~~A~~~Lr~G~~d~-~v~Gae~  260 (263)
                       |+++| +++|+|+++||+.|+++|++|.+|. +|+|+|.
T Consensus       136 ~~~~~v~~~aCss~~~Al~~A~~~i~~g~~~~vLv~g~e~  175 (382)
T 1u0m_A          136 TRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEF  175 (382)
T ss_dssp             CEEEEECSCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEE
T ss_pred             cceEEccCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEec
Confidence             89999 9999999999999999999999984 5677764

>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}

Probab=99.45  E-value=5e-14  Score=123.67  Aligned_cols=136  Identities=19%  Similarity=0.210  Sum_probs=95.7

Q ss_pred             cEEEEecceeCCcC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHHH
Q 024765           71 RIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGK  149 (263)
Q Consensus        71 ~VaItG~g~~~p~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa~  149 (263)
                      +|.|+|+|+..|.. .+.+++++.+......+.  ++.   +...+.   +        ..+      ++..+|++++++
T Consensus         2 ~~~I~~~g~~~P~~~~~~~~~~~~~~~~~~~i~--~~~---Gi~~r~---~--------~~~------~~~~~l~~~a~~   59 (309)
T 2ebd_A            2 GTKIIGTGVYLPKNVLTNFDLEKIVDTSDEWIT--TRT---GIKERR---I--------AKE------ETITYMATQAAK   59 (309)
T ss_dssp             CEEEEEEEEECCSEEEEHHHHHTTSSCCHHHHH--HHH---CCCEEE---E--------CSS------CCHHHHHHHHHH
T ss_pred             ceEEEEEEEECCCceEcHHHHHHHcCCCHHHHH--HHh---Cceeee---e--------cCC------CCHHHHHHHHHH
Confidence            58999999999987 467777654311000000  000   111110   0        001      557899999999


Q ss_pred             HHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCCC-ccccc
Q 024765          150 KALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTG-PSYSI  228 (263)
Q Consensus       150 ~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv  228 (263)
                      +||+|||++++.   ++    +|++|+..+..                        ..++ ++.+|+..||++| |+++|
T Consensus        60 ~al~~ag~~~~~---id----~v~~~~~~~~~------------------------~~~~-~a~~v~~~lgl~~~~~~~v  107 (309)
T 2ebd_A           60 EALREANLSPEE---LD----LIILATLTPQK------------------------RFPS-TACLVQAQLKAKGVYAFDI  107 (309)
T ss_dssp             HHHHHHTCCGGG---CS----EEEEECSSCSS------------------------SSSC-HHHHHHHHHTCTTCEEEEE
T ss_pred             HHHHHcCCCHHH---CC----EEEEEcCCCCC------------------------CCCc-HHHHHHHHhCCCCceEEec
Confidence            999999998643   22    79999864210                        1122 6899999999999 99999


Q ss_pred             cccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          229 STACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       229 ~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      +++|+|++.||+.|+++|++|++|.+ |+|+|.
T Consensus       108 ~~~C~s~~~al~~A~~~i~~g~~~~vlv~g~e~  140 (309)
T 2ebd_A          108 SAACSGFIYALDIADSFIKSGKAKNVLVIGAEK  140 (309)
T ss_dssp             ECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEE
T ss_pred             CccchHHHHHHHHHHHHHHCCCCCEEEEEEecc
Confidence            99999999999999999999999854 667663

>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2

Probab=99.39  E-value=1.7e-13  Score=121.17  Aligned_cols=135  Identities=16%  Similarity=0.120  Sum_probs=93.6

Q ss_pred             EEEEecceeCCcC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHHHH
Q 024765           72 IVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGKK  150 (263)
Q Consensus        72 VaItG~g~~~p~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa~~  150 (263)
                      +.|+|+|...|.. .+.+++++.+......+.  ++.   +...+.   +        .     ...++...|+++++++
T Consensus         2 ~~I~~~g~~~P~~~~~~~~~~~~~~~~~~~i~--~~~---Gi~~r~---~--------~-----~~~~~~~~la~~a~~~   60 (322)
T 1ub7_A            2 SGILALGAYVPERVMTNADFEAYLDTSDEWIV--TRT---GIKERR---V--------A-----AEDEYTSDLAFKAVED   60 (322)
T ss_dssp             CEEEEEEEECCSEEEEHHHHHTTSSCCHHHHH--HHT---CCCEEE---E--------C-----CTTCCHHHHHHHHHHH
T ss_pred             cEEEEEEEECCCceecHHHHHHHhCCCHHHHH--Hhc---CceEEe---e--------c-----CCCCCHHHHHHHHHHH
Confidence            4799999999987 577777654321100000  000   111111   0        0     0123468899999999


Q ss_pred             HHHHcCCCCcccCcCCCCce-EEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCCCcccccc
Q 024765          151 ALVDAGITEQVSGELDKSRC-GVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSIS  229 (263)
Q Consensus       151 Al~dAGl~~~~~~~~~~~r~-gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~tv~  229 (263)
                      ||+|||++++        ++ +|++|++...                        ...+ ..+.+|+..||+++|+++|+
T Consensus        61 al~~ag~~~~--------~id~vi~~~~~~~------------------------~~~~-~~a~~v~~~lgl~~~~~~v~  107 (322)
T 1ub7_A           61 LLRRHPGALE--------GVDAVIVATNTPD------------------------ALFP-DTAALVQARFGLKAFAYDLL  107 (322)
T ss_dssp             HHHHSTTTTT--------TEEEEEEECSSCS------------------------EEES-CHHHHHHHHTTCCCEEEEEE
T ss_pred             HHHHcCCCHH--------HCCEEEEEcCCCC------------------------CCCC-cHHHHHHHHhCCCCEEEeeC
Confidence            9999999853        33 6888876311                        1112 36899999999999999999


Q ss_pred             ccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          230 TACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       230 tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      ++|+|++.||+.|+++|++|++|.+ |+|+|.
T Consensus       108 ~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~  139 (322)
T 1ub7_A          108 AGCPGWIYALAQAHALVEAGLAQKVLAVGAEA  139 (322)
T ss_dssp             CSTTHHHHHHHHHHHHHHTTSCSEEEEEEEEC
T ss_pred             ccchHHHHHHHHHHHHHHcCCCCEEEEEEech
Confidence            9999999999999999999999855 667774

>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}

Probab=99.36  E-value=6e-13  Score=118.20  Aligned_cols=135  Identities=24%  Similarity=0.245  Sum_probs=95.1

Q ss_pred             CcEEEEecceeCCcC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHH
Q 024765           70 RRIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (263)
Q Consensus        70 ~~VaItG~g~~~p~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa  148 (263)
                      .+|.|+|+|+..|.. .+.+++|+.+......|.  ++.   +...+.           +..+      ++...|+++++
T Consensus         4 m~~~I~g~g~~~P~~~~~~~~~~~~~~~~~~~i~--~~~---Gi~~R~-----------~~~~------~~~~~la~~Aa   61 (331)
T 2x3e_A            4 RAAVVCGLGSYLPEAVLSNDMLAAELDTSDAWIS--SRT---GVRQRH-----------IAGD------LGSGDLALRAA   61 (331)
T ss_dssp             CEEEEEEEEEECCSCEEEHHHHHHHTTCCHHHHH--HHH---CCCEEE-----------CCTT------CCHHHHHHHHH
T ss_pred             ceeEEEEEEEECCCcEecHHHHHHHhCCCHHHHH--Hhh---CceEEE-----------ecCC------CCHHHHHHHHH
Confidence            468999999999987 677888876532110000  000   011110           0111      56789999999


Q ss_pred             HHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCC-Ccccc
Q 024765          149 KKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWT-GPSYS  227 (263)
Q Consensus       149 ~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-Gp~~t  227 (263)
                      ++||++||+  +.   ++    +|++|++.+.                    +.    .+ ..+.+|+..||++ +|+++
T Consensus        62 ~~al~~ag~--~~---id----~vi~~t~~~~--------------------~~----~p-~~a~~v~~~lgl~~~~~~~  107 (331)
T 2x3e_A           62 SAALASAGL--ER---VD----AVVLATSTGD--------------------FC----CP-ATAPRVAARLGLVGALAFD  107 (331)
T ss_dssp             HHHHHHHTC--SC---CS----EEEEECSSCS--------------------EE----ES-CSHHHHHHHTTCTTSEEEE
T ss_pred             HHHHHhCCc--cc---CC----EEEEEeCCCC--------------------CC----CC-hHHHHHHHHhCCCCCcEEE
Confidence            999999998  22   22    6788876421                    11    11 2578999999998 89999


Q ss_pred             ccccchHHHHHHHHHHHHHHhcccce-EeeccCC
Q 024765          228 ISTACASSNYSILNATSHIIKGDTVS-NSPSSQA  260 (263)
Q Consensus       228 v~tACsSsl~Al~~A~~~Lr~G~~d~-~v~Gae~  260 (263)
                      |+++|+|++.||+.|+++|+.|++|. +|+|+|.
T Consensus       108 v~~aCas~~~Al~~A~~~i~~g~~~~vLv~g~e~  141 (331)
T 2x3e_A          108 LSAAATGFVYGLASVGSLISAGLADSALLVGVDT  141 (331)
T ss_dssp             EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC
T ss_pred             EcCcChHHHHHHHHHHHHHHcCCCCEEEEEEeec
Confidence            99999999999999999999999985 5677774

>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A

Probab=99.35  E-value=4.2e-13  Score=118.05  Aligned_cols=90  Identities=26%  Similarity=0.310  Sum_probs=73.2

Q ss_pred             HHHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHH
Q 024765          139 KYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMD  218 (263)
Q Consensus       139 ~~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~  218 (263)
                      +...|+++++++||+++|++++.   ++    +|++|++.++.                    .    .+ ..+.+|+..
T Consensus        50 ~~~~l~~~a~~~al~~ag~~~~~---id----~vi~~~~~~~~--------------------~----~~-~~a~~v~~~   97 (313)
T 1zow_A           50 DTSDLAYEASVKAIADAGIQPED---ID----MIIVATATGDM--------------------P----FP-TVANMLQER   97 (313)
T ss_dssp             CHHHHHHHHHHHHHHHHTCCGGG---CC----EEEEECSSCSC--------------------S----SS-CHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHcCCCHHH---CC----EEEEEcCCCCC--------------------C----CC-cHHHHHHHH
Confidence            46789999999999999998643   22    78998764311                    0    11 358899999


Q ss_pred             hCCC-CccccccccchHHHHHHHHHHHHHHhcccce-EeeccCC
Q 024765          219 LGWT-GPSYSISTACASSNYSILNATSHIIKGDTVS-NSPSSQA  260 (263)
Q Consensus       219 lgl~-Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~-~v~Gae~  260 (263)
                      +|++ +|+++|+++|+|++.||+.|+++|++|++|. +|+|+|.
T Consensus        98 lgl~~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vLv~g~e~  141 (313)
T 1zow_A           98 LGTGKVASMDQLAACSGFMYSMITAKQYVQSGDYHNILVVGADK  141 (313)
T ss_dssp             HTCCSCCEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEE
T ss_pred             hCCCCCcEEEECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEcc
Confidence            9998 6999999999999999999999999999985 5677774

>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A

Probab=99.34  E-value=2.5e-12  Score=117.14  Aligned_cols=88  Identities=17%  Similarity=0.151  Sum_probs=73.0

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ++|+++++++||+|||++++.   ++    +|++|+..++..                         ...++.+|++.||
T Consensus        31 ~~L~~~a~~~Al~dAGl~~~~---id----~v~~g~~~~~~~-------------------------~~~~a~~ia~~lg   78 (397)
T 1wl4_A           31 QDLGSTVIKEVLKRATVAPED---VS----EVIFGHVLAAGC-------------------------GQNPVRQASVGAG   78 (397)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGG---CC----EEEEECSCCTTS-------------------------CSCHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHcCCCHHH---CC----EEEEEecCCCCC-------------------------CCHHHHHHHHHcC
Confidence            679999999999999998643   22    689987653211                         1347899999999


Q ss_pred             C--CCccccccccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          221 W--TGPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       221 l--~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      +  +||+++|+++|+|++.||++|+++|++|+||++ ++|+|.
T Consensus        79 l~~~~p~~~v~~aCaSg~~Ai~~A~~~I~~G~~d~vlagG~e~  121 (397)
T 1wl4_A           79 IPYSVPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMEN  121 (397)
T ss_dssp             CCTTSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEE
T ss_pred             CCCCccEEEecCcChhHHHHHHHHHHHHHCCCCCEEEEEEEee
Confidence            9  899999999999999999999999999999966 566664

>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*

Probab=99.33  E-value=3.9e-12  Score=115.68  Aligned_cols=88  Identities=18%  Similarity=0.270  Sum_probs=71.6

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ++|+++++++||+|||++++.   ++    ++++|+..+..                         ....++.+|++.||
T Consensus        33 ~~l~~~a~~~Al~dAgl~~~~---id----~~~~g~~~~~~-------------------------~~~~~a~~va~~lg   80 (395)
T 2ib8_A           33 TKLGSIAIQGAIEKAGIPKEE---VK----EAYMGNVLQGG-------------------------EGQAPTRQAVLGAG   80 (395)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGG---CC----EEEEECSCCTT-------------------------SCSCHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHcCCCHHH---CC----EEEEEeccCCC-------------------------CCchHHHHHHHHcC
Confidence            678999999999999998643   32    57787654211                         12346889999999


Q ss_pred             C--CCccccccccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          221 W--TGPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       221 l--~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      +  +||+++|+++|+|+++||++|+++|++|+||++ ++|+|.
T Consensus        81 l~~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~  123 (395)
T 2ib8_A           81 LPISTPCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGMES  123 (395)
T ss_dssp             CCTTCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEE
T ss_pred             CCCCceEEEecccccHHHHHHHHHHHHHHCCCCCEEEEEeeec
Confidence            9  899999999999999999999999999999965 556663

>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1

Probab=99.33  E-value=3.8e-12  Score=116.02  Aligned_cols=89  Identities=12%  Similarity=0.111  Sum_probs=73.8

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      .+|+++++++||+|||++++.   ++    +|++|+..++..                        ..+.++.+|++.||
T Consensus        27 ~~L~~~Aa~~Al~dAgl~~~~---id----~v~~g~~~~~~~------------------------~~~~~a~~va~~lG   75 (401)
T 1ulq_A           27 DDLLAHALSVLVDRSGVPKEE---VE----DVYAGCANQAGE------------------------DNRNVARMALLLAG   75 (401)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGG---CC----EEEEECSCCSST------------------------TTTTHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHcCCCHHH---CC----EEEEEecccCCC------------------------CCChHHHHHHHHhC
Confidence            578999999999999998653   32    799997643211                        12467899999999


Q ss_pred             C--CCccccccccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          221 W--TGPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       221 l--~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      +  ++|+++|+++|+|+++||++|+++|++|++|++ ++|+|.
T Consensus        76 l~~~~p~~~v~~aCas~~~Al~~A~~~I~~G~~d~vLv~G~e~  118 (401)
T 1ulq_A           76 FPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVES  118 (401)
T ss_dssp             CCTTCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEE
T ss_pred             CCCCccEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEEEee
Confidence            9  799999999999999999999999999999965 567764

>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*

Probab=99.32  E-value=2.6e-12  Score=116.76  Aligned_cols=90  Identities=16%  Similarity=0.085  Sum_probs=74.1

Q ss_pred             HHHHHHHHHHHHHHHc-CCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHH
Q 024765          140 YLIYALVAGKKALVDA-GITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMD  218 (263)
Q Consensus       140 ~~~l~l~aa~~Al~dA-Gl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~  218 (263)
                      .++|+++++++||+|| |++++.   ++    +|++|+..++..                        ..+.++.+|++.
T Consensus        30 ~~~L~~~a~~~AL~dA~gl~~~~---id----~v~~g~~~~~~~------------------------~~~~~a~~ia~~   78 (390)
T 1wdk_C           30 AEDMSAHLISKVLERNSKVDPGE---VE----DVIWGCVNQTLE------------------------QGWNIARMASLM   78 (390)
T ss_dssp             HHHHHHHHHHHHHHHCTTSCGGG---EE----EEEEECSSBSBT------------------------TTTTHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhccCCCHHH---CC----EEEEEeeccccC------------------------CCCcHHHHHHHH
Confidence            3689999999999999 998543   22    799998643211                        124678999999


Q ss_pred             hCC--CCccccccccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          219 LGW--TGPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       219 lgl--~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      ||+  +||+++|+++|+|++.||++|+++|++|+||++ ++|+|.
T Consensus        79 lgl~~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~  123 (390)
T 1wdk_C           79 TQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEH  123 (390)
T ss_dssp             SSSCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEE
T ss_pred             cCCCCCccEEEEcccchhHHHHHHHHHHHHHcCCCCEEEEeeeec
Confidence            999  999999999999999999999999999999965 566664

>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}

Probab=99.32  E-value=3.8e-12  Score=113.21  Aligned_cols=140  Identities=19%  Similarity=0.252  Sum_probs=97.7

Q ss_pred             cEEEEecceeCCcC-CCHHHHHHHHHcCCCceeeCCCCCCC--CCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHH
Q 024765           71 RIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCS--EFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVA  147 (263)
Q Consensus        71 ~VaItG~g~~~p~g-~~~~~~w~~L~~G~~~i~~~~~~~~~--~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~a  147 (263)
                      +|.|+|+|...|.- .+.+++|+.+.+..  +...+.|-..  +...+..  ..         +     -.....|+.++
T Consensus        11 ~v~I~g~g~~lP~~~v~~~~l~~~l~~~~--~~~~~~~i~~rtgi~~r~~--~~---------~-----~~~~~~la~~A   72 (333)
T 4dfe_A           11 YSRVLGTGSYLPPNRVTNQDLAKRLAEQG--IETSDEWIVARTGIHARYF--AE---------P-----DVTTSDLAFIA   72 (333)
T ss_dssp             EEEEEEEEEECCSEEEEHHHHHHHHC-----CCCCHHHHHHHHCCSEEEE--CC---------T-----TCCHHHHHHHH
T ss_pred             ceEEEEEEEECCCcEEcHHHHHHHhcccc--CCCCHHHhHHhcCceEEEE--cC---------C-----CCCHHHHHHHH
Confidence            79999999999986 78999999874311  1100011000  1111110  00         0     12357899999


Q ss_pred             HHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCC--CCcc
Q 024765          148 GKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGW--TGPS  225 (263)
Q Consensus       148 a~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~Gp~  225 (263)
                      +++||+++|++++.++       .|++|+..+..                         .....+.+|+..||+  ++|+
T Consensus        73 a~~al~~ag~~~~~Id-------~vi~~t~~~~~-------------------------~~p~~a~~v~~~lgl~~~~~~  120 (333)
T 4dfe_A           73 SQRAIEAADIDPQSID-------LIIVATSTPDF-------------------------VFPSTACLLQNKLGIRNHGAA  120 (333)
T ss_dssp             HHHHHHHHTCCGGGCC-------EEEEECSSCSS-------------------------SBSCHHHHHHHHTTCCSCCEE
T ss_pred             HHHHHHHcCCCHHHCC-------EEEEEeCCCCC-------------------------CCCcHHHHHHHHhCCCCCCcE
Confidence            9999999999865433       68888764211                         112458899999999  7899


Q ss_pred             ccccccchHHHHHHHHHHHHHHhcccce-EeeccCC
Q 024765          226 YSISTACASSNYSILNATSHIIKGDTVS-NSPSSQA  260 (263)
Q Consensus       226 ~tv~tACsSsl~Al~~A~~~Lr~G~~d~-~v~Gae~  260 (263)
                      ++|+++|+|++.||+.|+++|++|.++. +|+|+|.
T Consensus       121 ~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~  156 (333)
T 4dfe_A          121 FDVQAVCSGFAYAVATADSFIRSGQHRTALVIGAET  156 (333)
T ss_dssp             EEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEE
T ss_pred             EEeCcccHHHHHHHHHHHHHHHcCCCCEEEEEEeec
Confidence            9999999999999999999999999985 5677764

>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A

Probab=99.31  E-value=7.1e-12  Score=112.01  Aligned_cols=143  Identities=17%  Similarity=0.171  Sum_probs=97.9

Q ss_pred             CCCCcEEEEecceeCCcC-CCHHHHHHHHHc-----CCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHH
Q 024765           67 PKERRIVVTGLGAVTPLG-DDAHLFHTSLLE-----GVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKY  140 (263)
Q Consensus        67 ~~~~~VaItG~g~~~p~g-~~~~~~w~~L~~-----G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~  140 (263)
                      |..++|.|+|+|...|.- .+.+++.+.+..     +.+. ..+.  ...+...+.   +.  ++.           ...
T Consensus         8 m~~~~v~I~~~g~~lP~~~v~n~~l~~~~~~~~~~~~~~~-~~i~--~~tGi~~R~---~~--~~~-----------~~~   68 (345)
T 3s21_A            8 MLFQNVSIAGLAHIDAPHTLTSKEINERLQPTYDRLGIKT-DVLG--DVAGIHARR---LW--DQD-----------VQA   68 (345)
T ss_dssp             GSCSSEEEEEEEEEECSEEEEHHHHHHHHHHHHHHHTCCC-CHHH--HTTCCSEEE---EC--SSC-----------CCH
T ss_pred             ceecceEEEEEEEeCCCcEEcHHHHHHHHhhcccccCCCH-HHHH--HhhCceeEE---EC--CCC-----------CCH
Confidence            455789999999999987 677777776521     2110 0000  001111111   00  000           124


Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+.+++++||+++|++++.++       .|++|+...+                         ......+.+|+..||
T Consensus        69 ~~La~~Aa~~al~~ag~~~~~Id-------~vi~~t~~~~-------------------------~~~p~~a~~v~~~lG  116 (345)
T 3s21_A           69 SDAATQAARKALIDANIGIEKIG-------LLINTSVSRD-------------------------YLEPSTASIVSGNLG  116 (345)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGCC-------EEEECCSCCS-------------------------CSSSCHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeCCCC-------------------------CCCChHHHHHHHHhC
Confidence            67899999999999999965433       5788875311                         111245889999999


Q ss_pred             CC--CccccccccchHHHHHHHHHHHHHHhcccce-EeeccCC
Q 024765          221 WT--GPSYSISTACASSNYSILNATSHIIKGDTVS-NSPSSQA  260 (263)
Q Consensus       221 l~--Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~-~v~Gae~  260 (263)
                      +.  +|++.|+++|+|++.||+.|+++|++|.++. +|+|+|.
T Consensus       117 l~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~  159 (345)
T 3s21_A          117 VSDHCMTFDVANACLAFINGMDIAARMLERGEIDYALVVDGET  159 (345)
T ss_dssp             CCTTCEEEECCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEC
T ss_pred             CCCCceEEeECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEcc
Confidence            96  7999999999999999999999999999985 5677774

>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...

Probab=99.31  E-value=4.3e-12  Score=115.31  Aligned_cols=88  Identities=16%  Similarity=0.213  Sum_probs=71.9

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      .+|+++++++||+|||++++.   ++    ++++|+..+...                         ...++.+|++.+|
T Consensus        28 ~~L~~~a~~~Al~dAgl~~~~---id----~~~~g~~~~~~~-------------------------~~~~a~~ia~~lg   75 (392)
T 2vu1_A           28 HELGATVISAVLERAGVAAGE---VN----EVILGQVLPAGE-------------------------GQNPARQAAMKAG   75 (392)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGG---CC----EEEEECSCCTTS-------------------------CSCHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHcCCCHHH---CC----EEEEEecCCCCC-------------------------CcHHHHHHHHHcC
Confidence            678999999999999998643   32    677776542110                         1357899999999


Q ss_pred             CC--CccccccccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          221 WT--GPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       221 l~--Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      ++  ||+++|+++|+||+.||++|+++|++|+||++ ++|+|.
T Consensus        76 l~~~~p~~~v~~aCaSgl~Al~~A~~~I~~G~~d~vlvgG~e~  118 (392)
T 2vu1_A           76 VPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMES  118 (392)
T ss_dssp             CCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEE
T ss_pred             CCCCceEEEecccchHHHHHHHHHHHHHHCCCCCEEEEEEEec
Confidence            99  99999999999999999999999999999965 566664

>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A

Probab=99.29  E-value=9.3e-12  Score=113.19  Aligned_cols=88  Identities=9%  Similarity=0.064  Sum_probs=73.3

Q ss_pred             HHHHHHHHHHHHHHcC----CCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHH
Q 024765          141 LIYALVAGKKALVDAG----ITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLA  216 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAG----l~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia  216 (263)
                      .+|+++++++||+|||    ++++.   ++    +|++|+..++.                         ..+.++.+|+
T Consensus        36 ~~La~~Aa~~Al~~Ag~~~~l~~~~---id----~v~~g~~~~~~-------------------------~~~~~a~~va   83 (393)
T 1afw_A           36 DYLLYNFLNEFIGRFPEPLRADLNL---IE----EVACGNVLNVG-------------------------AGATEHRAAC   83 (393)
T ss_dssp             HHHHHHHHHHHHHTSCHHHHTCGGG---CC----CEEEECSSSBG-------------------------GGHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCHHH---CC----EEEEEecCCCC-------------------------CCChHHHHHH
Confidence            5789999999999999    98653   32    58998764321                         1356789999


Q ss_pred             HHhCC--CCccccccccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          217 MDLGW--TGPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       217 ~~lgl--~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      +.+|+  +||+++|+++|+|+++||++|+++|++|++|++ ++|+|.
T Consensus        84 ~~lGl~~~~p~~~v~~aCasg~~Al~~A~~~I~~G~~d~vLv~G~e~  130 (393)
T 1afw_A           84 LASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVES  130 (393)
T ss_dssp             HHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEE
T ss_pred             HHcCCCCCceEEEEcCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEEe
Confidence            99999  899999999999999999999999999999965 566663

>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A

Probab=99.28  E-value=8.4e-12  Score=115.10  Aligned_cols=89  Identities=9%  Similarity=0.112  Sum_probs=73.5

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      .+|+++++++||+|||++++.   ++    +|++|+..++..                        ..+.++.+|++.||
T Consensus        56 ~~La~~Aa~~AL~dAGl~~~~---Id----~vi~g~~~~~~~------------------------~~~~~a~~va~~lG  104 (442)
T 2wu9_A           56 DDLLAPVLRALIEKTNLNPSE---VG----DIVVGTVLAPGS------------------------QRASECRMAAFYAG  104 (442)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGG---CC----CEEEECCSSBHH------------------------HHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHcCCCHHH---CC----EEEEEeecCccC------------------------CCChHHHHHHHHcC
Confidence            578999999999999998654   33    689998653221                        12466889999999


Q ss_pred             C--CCccccccccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          221 W--TGPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       221 l--~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      +  ++|+++|+++|+|+++||++|+++|++|+||++ ++|+|.
T Consensus       105 l~~~~p~~~v~~aCaSg~~Al~~A~~~I~sG~~d~vLvgG~e~  147 (442)
T 2wu9_A          105 FPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLES  147 (442)
T ss_dssp             CCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEE
T ss_pred             CCCCceEEEeCCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEee
Confidence            9  899999999999999999999999999999965 566664

>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}

Probab=99.26  E-value=1.3e-11  Score=113.09  Aligned_cols=88  Identities=11%  Similarity=0.114  Sum_probs=72.3

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      .+|+++++++||+|||++++.   ++    +|++|+..++..                         ....+..+++.+|
T Consensus        56 ~~L~~~Aa~~AL~dAgl~~~~---id----~v~~g~~~~~~~-------------------------~~~~a~~~a~~lG  103 (418)
T 2iik_A           56 DELLSAVMTAVLKDVNLRPEQ---LG----DICVGNVLQPGA-------------------------GAIMARIAQFLSD  103 (418)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGG---CC----CEEEECSSSBGG-------------------------GHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHcCCCHHH---CC----EEEEEecCCccc-------------------------cccHHHHHHHHcC
Confidence            678999999999999998654   32    689997643211                         2356677889999


Q ss_pred             C--CCccccccccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          221 W--TGPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       221 l--~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      +  ++|+++|+++|+|+++||++|+++|++|++|++ |+|+|.
T Consensus       104 l~~~~p~~~v~~aCss~~~Al~~A~~~I~~G~~d~vLv~G~e~  146 (418)
T 2iik_A          104 IPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVES  146 (418)
T ss_dssp             CCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEE
T ss_pred             CCCCceEEEeCCCCHHHHHHHHHHHHHHHCCCCCEEEEecccc
Confidence            9  899999999999999999999999999999965 566664

>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A

Probab=99.24  E-value=4.9e-12  Score=114.78  Aligned_cols=105  Identities=11%  Similarity=-0.030  Sum_probs=83.5

Q ss_pred             CCCCCC-CCHHHHhhcCHHHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCc
Q 024765          123 LSTGGW-ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPF  201 (263)
Q Consensus       123 fd~~~~-i~~~~~~~~d~~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~  201 (263)
                      ||..+. +..++...+.....|+.+++.+||+++|++++.++       .|++++..+                     +
T Consensus        80 ~~~~~~~~~~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~~Id-------~li~~t~~~---------------------~  131 (387)
T 3a5r_A           80 AAYEATSLNVRHKMQVKGVAELGKEAALKAIKEWGQPKSKIT-------HLIVCCLAG---------------------V  131 (387)
T ss_dssp             HSSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC-------EEEEEESSC---------------------C
T ss_pred             ccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCC---------------------C
Confidence            454444 66777777888899999999999999999865422       577776531                     0


Q ss_pred             ccccccchHHHHHHHHHhCCCCc---cccccccchHHHHHHHHHHHHHHhcccc-eEeeccCC
Q 024765          202 YIPYSLTNMASAVLAMDLGWTGP---SYSISTACASSNYSILNATSHIIKGDTV-SNSPSSQA  260 (263)
Q Consensus       202 ~~~~~~~~~~a~~ia~~lgl~Gp---~~tv~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~  260 (263)
                           .....+.+|+..||++++   .+.|+++|+|++.||..|.++|++|.++ ++|+|+|.
T Consensus       132 -----~~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~  189 (387)
T 3a5r_A          132 -----DMPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIAENNKGARVLIVCSEM  189 (387)
T ss_dssp             -----EESCHHHHHHHHTTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEEC
T ss_pred             -----CCCcHHHHHHHHcCcCCCcceeeeEccccHHHHHHHHHHHHHHHhCCCCEEEEEEEec
Confidence                 112368899999999986   7899999999999999999999999998 55788884

>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}

Probab=99.23  E-value=3.1e-11  Score=109.52  Aligned_cols=89  Identities=15%  Similarity=0.107  Sum_probs=72.6

Q ss_pred             HHHHHHHHHHHHHHHc-CCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHH
Q 024765          140 YLIYALVAGKKALVDA-GITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMD  218 (263)
Q Consensus       140 ~~~l~l~aa~~Al~dA-Gl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~  218 (263)
                      .+.|+++++++||+|| |++++.++       +|++|+.....                        .....++.+++..
T Consensus        27 ~~~L~~~a~~~Al~~a~gi~~~~Id-------~v~~g~~~~~~------------------------~~~~~~a~~~~~~   75 (387)
T 3goa_A           27 AEDLSAHLMRSLLARNPSLTAATLD-------DIYWGCVQQTL------------------------EQGFNIARNAALL   75 (387)
T ss_dssp             HHHHHHHHHHHHHHHCTTSCGGGCC-------EEEEECSCCSB------------------------TTTTTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccCCCHHHcC-------EEEEEcccCCc------------------------ccccHHHHHHHHH
Confidence            4679999999999999 99976533       68998764211                        1123467899999


Q ss_pred             hCC--CCccccccccchHHHHHHHHHHHHHHhcccceE-eeccC
Q 024765          219 LGW--TGPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQ  259 (263)
Q Consensus       219 lgl--~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae  259 (263)
                      +|+  .+|+++|+++|+|+++||++|+++|++|++|++ |+|+|
T Consensus        76 ~Gl~~~~p~~~v~~aCss~l~Al~~A~~~I~sG~~d~vLv~G~e  119 (387)
T 3goa_A           76 AEIPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVE  119 (387)
T ss_dssp             TTCCTTSCCEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEE
T ss_pred             cCCCCCCcEeEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEe
Confidence            999  689999999999999999999999999999966 56666

>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}

Probab=99.18  E-value=7.6e-11  Score=107.27  Aligned_cols=88  Identities=22%  Similarity=0.282  Sum_probs=72.1

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+++++++||+|||++++.++       +|++|+..+..                         ....++.+|++.+|
T Consensus        32 ~~L~~~A~~~AL~~agl~~~dId-------~vi~g~~~~~~-------------------------~~~~~a~~v~~~lG   79 (396)
T 4dd5_A           32 VELGVTAAKEAIKRANITPDMID-------ESLLGGVLTAG-------------------------LGQNIARQIALGAG   79 (396)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCC-------EEEEECSCCTT-------------------------SCSCHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeecCCC-------------------------CCchHHHHHHHHcC
Confidence            56899999999999999976533       78998764211                         12346889999999


Q ss_pred             C--CCccccccccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          221 W--TGPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       221 l--~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      +  ++|+++|+++|+|++.||++|+++|++|++|.+ |+|+|.
T Consensus        80 l~~~~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vLv~g~e~  122 (396)
T 4dd5_A           80 IPVEKPAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAEN  122 (396)
T ss_dssp             CCTTSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEE
T ss_pred             CCCCceEEEeccccHHHHHHHHHHHHHHhcCCCCEEEEEEEec
Confidence            9  589999999999999999999999999999965 566653

>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}

Probab=99.17  E-value=8.1e-11  Score=106.99  Aligned_cols=87  Identities=23%  Similarity=0.348  Sum_probs=71.4

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+++++++||+|||++++.++       +|++|+....                         .....++.+++..+|
T Consensus        30 ~~L~~~a~~~Al~~agi~~~~Id-------~v~~g~~~~~-------------------------~~~~~~a~~~~~~lG   77 (395)
T 4e1l_A           30 VQLGTIAVKEAISRVGLNLSEID-------EVIIGNVLQT-------------------------GLGQNVARQIAINAG   77 (395)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCC-------EEEEECCCCS-------------------------STTCCHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccCC-------------------------CCcchHHHHHHHHcC
Confidence            56899999999999999976533       7888875311                         011246889999999


Q ss_pred             C--CCccccccccchHHHHHHHHHHHHHHhcccceE-eeccC
Q 024765          221 W--TGPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQ  259 (263)
Q Consensus       221 l--~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae  259 (263)
                      +  ++|+++|+++|+|++.||++|+++|+.|+||.+ |+|+|
T Consensus        78 l~~~~p~~~v~~~Css~~~al~~A~~~I~~G~~~~vlv~g~e  119 (395)
T 4e1l_A           78 IPNSVPSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTE  119 (395)
T ss_dssp             CCTTSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEE
T ss_pred             CCCCceEEEccccchHHHHHHHHHHHHHhCCCCCEEEEEEEe
Confidence            9  689999999999999999999999999999965 56665

>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}

Probab=99.16  E-value=8.3e-11  Score=106.91  Aligned_cols=88  Identities=20%  Similarity=0.273  Sum_probs=71.9

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+++++++||+|+|++++.++       +|++|+.....                         ....++.+++..+|
T Consensus        30 ~~L~~~A~~~Al~~agl~~~~Id-------~v~~g~~~~~~-------------------------~~~~~a~~i~~~lG   77 (394)
T 3ss6_A           30 VELAVPVLQEAVKRGGVEPHEVD-------EVILGHCIQRT-------------------------DEANTARTAALAAG   77 (394)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCC-------EEEEECSSCCG-------------------------GGCSHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHcCCCHhHCC-------EEEEEEccCCC-------------------------ccchHHHHHHHHcC
Confidence            56899999999999999976543       68888764211                         12246789999999


Q ss_pred             C--CCccccccccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          221 W--TGPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       221 l--~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      +  ++|+++|+++|+|+++||++|+++|+.|++|++ |+|+|.
T Consensus        78 l~~~~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vlv~G~e~  120 (394)
T 3ss6_A           78 FPDTVTGYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEA  120 (394)
T ss_dssp             CCTTCEEEEEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEE
T ss_pred             CCCCceEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEhh
Confidence            9  689999999999999999999999999999965 566653

>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A

Probab=99.16  E-value=9.4e-11  Score=107.24  Aligned_cols=98  Identities=17%  Similarity=0.031  Sum_probs=78.5

Q ss_pred             CHHHHhhcCHHHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccch
Q 024765          130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTN  209 (263)
Q Consensus       130 ~~~~~~~~d~~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (263)
                      ..+....++....|+.+++.+||+++|++++.++       .|++|++.+                     +    .. .
T Consensus       115 ~~r~~~~~~~~~~La~~Aa~~AL~~agl~~~~Id-------~li~~t~~~---------------------~----~~-p  161 (413)
T 1xes_A          115 DARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGIT-------HLIFCSTTT---------------------P----DL-P  161 (413)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC-------EEEEEESCC---------------------C----EE-S
T ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEEeCC---------------------C----cc-c
Confidence            3455666678899999999999999999865432       577787631                     1    11 2


Q ss_pred             HHHHHHHHHhCCCCc---cccccccchHHHHHHHHHHHHHHhcccc-eEeeccCC
Q 024765          210 MASAVLAMDLGWTGP---SYSISTACASSNYSILNATSHIIKGDTV-SNSPSSQA  260 (263)
Q Consensus       210 ~~a~~ia~~lgl~Gp---~~tv~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~  260 (263)
                      ..+.+|+..||++++   ++.|+++|+|++.||..|+++|+.|.+| ++|+|+|.
T Consensus       162 ~~a~~v~~~lGl~~~~~~~~~v~~aCas~~~AL~~A~~~i~~G~~~~vLvvg~E~  216 (413)
T 1xes_A          162 GADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSET  216 (413)
T ss_dssp             CHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCCEEEEEEEC
T ss_pred             hHHHHHHHHcCcCCccchhceecCccHHHHHHHHHHHHHHHcCCCCEEEEEEehh
Confidence            357899999999985   7899999999999999999999999997 56788885

>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}

Probab=99.14  E-value=1.2e-10  Score=105.78  Aligned_cols=91  Identities=15%  Similarity=0.208  Sum_probs=72.9

Q ss_pred             CHHHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHH
Q 024765          138 DKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAM  217 (263)
Q Consensus       138 d~~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~  217 (263)
                      .....|+.+|+.+||+++|++++.++       .|++|+...+                        ...+ ..+.+|+.
T Consensus       115 ~~~~~La~~Aa~~AL~~agi~~~dId-------~vi~~t~t~~------------------------~~~p-~~a~~v~~  162 (392)
T 3led_A          115 SILAEMAVTAAEQAIERWGKPRERIG-------AVLCACSNMQ------------------------RAYP-AMAIEVQN  162 (392)
T ss_dssp             CHHHHHHHHHHHHHHHHHCSCGGGEE-------EEEEESSCCS------------------------CSBS-CHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCCC------------------------CCcc-HHHHHHHH
Confidence            34578999999999999999865422       5777765321                        0112 36889999


Q ss_pred             HhCCCCccccccccchHHHHHHHHHHHHHHhcccc-eEeeccCC
Q 024765          218 DLGWTGPSYSISTACASSNYSILNATSHIIKGDTV-SNSPSSQA  260 (263)
Q Consensus       218 ~lgl~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~  260 (263)
                      .+|++.|++.|+.+|+|+++||..|+++|++|.++ ++|+|+|.
T Consensus       163 ~LGl~~~~~dv~~aC~g~~~aL~~A~~~i~~g~~~~vLvvg~E~  206 (392)
T 3led_A          163 ALGLGGFAFDMNVACSSATFGLKTAADFVGGGSVDAVLMVNPEI  206 (392)
T ss_dssp             HTTCCSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEE
T ss_pred             HhCCCCeEEEECCccHHHHHHHHHHHHHHHCCCCCEEEEEeehh
Confidence            99999999999999999999999999999999998 55777774

>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A

Probab=99.13  E-value=2.8e-10  Score=103.34  Aligned_cols=90  Identities=14%  Similarity=0.185  Sum_probs=70.1

Q ss_pred             CHHHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHH
Q 024765          138 DKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAM  217 (263)
Q Consensus       138 d~~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~  217 (263)
                      .....|+.+++++||+++|++++.++       .|++|+..+                     +.    . ...+.+|+.
T Consensus       111 ~~~~~la~~Aa~~aL~~agl~~~~Id-------~vi~~t~~~---------------------~~----~-p~~a~~v~~  157 (393)
T 1ted_A          111 EHAVPLAVDVSKRALAGLPYRAAEIG-------LLVLATSTG---------------------FI----A-PGVDVAIVK  157 (393)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCGGGEE-------EEEEEESSC---------------------CC----S-SCHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEEeCC---------------------Cc----c-ChHHHHHHH
Confidence            45678999999999999999853222       455676531                     10    1 235789999


Q ss_pred             HhCCCCc--cccc-cccchHHHHHHHHHHHHHHhcccce-EeeccCC
Q 024765          218 DLGWTGP--SYSI-STACASSNYSILNATSHIIKGDTVS-NSPSSQA  260 (263)
Q Consensus       218 ~lgl~Gp--~~tv-~tACsSsl~Al~~A~~~Lr~G~~d~-~v~Gae~  260 (263)
                      .||++++  ++.+ +++|+|++.||..|+++|+.|.+|. +|+|+|.
T Consensus       158 ~lGl~~~~~~~~v~~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~  204 (393)
T 1ted_A          158 ELGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIEL  204 (393)
T ss_dssp             HHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEE
T ss_pred             HcCcCCCcceeEeccchhHHHHHHHHHHHHHHHcCCCCEEEEEEEEe
Confidence            9999986  5787 9999999999999999999999985 5677774

>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*

Probab=99.09  E-value=1.6e-10  Score=102.30  Aligned_cols=137  Identities=12%  Similarity=0.116  Sum_probs=94.3

Q ss_pred             CcEEEEecceeCCcC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHH
Q 024765           70 RRIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (263)
Q Consensus        70 ~~VaItG~g~~~p~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa  148 (263)
                      ++|.|+|+|...|.- .+.+++.+.+..-...|.+  +   .+...+.   +.        .+.     . ...|+.+++
T Consensus         3 ~~~~I~~~g~~lP~~~v~n~~~~~~~~~~~~~i~~--~---~Gi~~R~---~a--------~~~-----e-~~~La~~Aa   60 (321)
T 3il6_A            3 NYARISCTSRYVPENCVTNHQLSEMMDTSAAWIHS--R---TGISERR---IV--------TQE-----N-TSDLCHQVA   60 (321)
T ss_dssp             CEEEEEEEEEECCSCEEEHHHHHHHTTSCHHHHHH--H---HSCSEEE---CC--------SSC-----C-HHHHHHHHH
T ss_pred             CcEEEEEEEEECCCcEEcHHHHHHHhCCChhhhhh--h---cCceEEE---EC--------CCC-----C-HHHHHHHHH
Confidence            569999999999986 5777776654211000000  0   0111111   00        011     1 467999999


Q ss_pred             HHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCC-Ccccc
Q 024765          149 KKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWT-GPSYS  227 (263)
Q Consensus       149 ~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-Gp~~t  227 (263)
                      .+||+++|++++.++       .|++|+...+                         ......+.+|+..+|++ .|++.
T Consensus        61 ~~aL~~ag~~~~~Id-------~li~~t~~~~-------------------------~~~p~~a~~v~~~lGl~~~~~~~  108 (321)
T 3il6_A           61 KQLLEKSGKQASEID-------FILVATVTPD-------------------------FNMPSVACQVQGAIGATEAFAFD  108 (321)
T ss_dssp             HHHHHHHTCCGGGCC-------EEEEECSSCS-------------------------CSSSCHHHHHHHHTTCTTCEEEE
T ss_pred             HHHHHHcCCCHHHCC-------EEEEEeCCCC-------------------------cCCCcHHHHHHHHcCCCCceEEE
Confidence            999999999865433       6788875321                         11123688999999997 68999


Q ss_pred             ccccchHHHHHHHHHHHHHHhcccc-eEeeccCC
Q 024765          228 ISTACASSNYSILNATSHIIKGDTV-SNSPSSQA  260 (263)
Q Consensus       228 v~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~  260 (263)
                      |+.+|+|++.||..|+++|++|.++ ++|+|+|.
T Consensus       109 v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~  142 (321)
T 3il6_A          109 ISAACSGFVYALSMAEKLVLSGRYQTGLVIGGET  142 (321)
T ss_dssp             ECCGGGHHHHHHHHHHHHHHTSSCCCEEEEEEEC
T ss_pred             eCcccHHHHHHHHHHHHHHHCCCCCEEEEEEEcc
Confidence            9999999999999999999999998 55777774

>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A

Probab=99.07  E-value=6.2e-10  Score=100.94  Aligned_cols=99  Identities=14%  Similarity=0.064  Sum_probs=79.1

Q ss_pred             CCHHHHhhcCHHHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccc
Q 024765          129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLT  208 (263)
Q Consensus       129 i~~~~~~~~d~~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (263)
                      +..+....++....|+.+|+.+||++||++++.++       .|+++++.+                     +.     .
T Consensus        85 ~~~r~~~~~~~~~~La~~Aa~~AL~~ag~~~~dId-------~li~~t~t~---------------------~~-----~  131 (387)
T 3oit_A           85 LDARLDIAADAVPELAAEAAKKAIAEWGRPAADIT-------HLVVTTNSG---------------------AH-----V  131 (387)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCC-------EEEEEESSC---------------------CE-----E
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeeCC---------------------CC-----c
Confidence            34555566677889999999999999999865433       678887631                     11     1


Q ss_pred             hHHHHHHHHHhCCCCc---cccccccchHHHHHHHHHHHHHHhcccc-eEeeccCC
Q 024765          209 NMASAVLAMDLGWTGP---SYSISTACASSNYSILNATSHIIKGDTV-SNSPSSQA  260 (263)
Q Consensus       209 ~~~a~~ia~~lgl~Gp---~~tv~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~  260 (263)
                      ...+.+|+..||+++.   ++.++.+|+|++.||..|.++|++|.++ ++|+|+|.
T Consensus       132 p~~a~~v~~~LGl~~~~~~~~~~~~~C~~~~~al~~A~~~i~sg~~~~vLvvg~E~  187 (387)
T 3oit_A          132 PGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAENSRGARVLVVAAEL  187 (387)
T ss_dssp             SCHHHHHHHHHTCCTTCEEEEEECCGGGHHHHHHHHHHHHHHSSTTCEEEEEEEEC
T ss_pred             ccHHHHHHHHhCCCCCcceeeEECchhHHHHHHHHHHHHHHhcCCCCEEEEEEEec
Confidence            2458899999999984   6999999999999999999999999997 56788875

>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A

Probab=99.05  E-value=4.2e-10  Score=101.28  Aligned_cols=140  Identities=13%  Similarity=0.155  Sum_probs=94.8

Q ss_pred             CCCcEEEEecceeCCcC-CCHHHHHHHHHcCCCceeeC-CCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHH
Q 024765           68 KERRIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDI-QGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYAL  145 (263)
Q Consensus        68 ~~~~VaItG~g~~~p~g-~~~~~~w~~L~~G~~~i~~~-~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l  145 (263)
                      ..++|.|+|+|...|.- .+.+++.+.+. +.+ ...+ ++   .+...+.  ...         +.     .....|+.
T Consensus        27 ~~~~v~I~gig~~lP~~~v~n~~l~~~~~-~~~-~~~i~~~---tGI~~R~--~a~---------~~-----~~~~~La~   85 (365)
T 3gwa_A           27 HPPRAAIADIAGHLPEQVLTNDVLAQLYP-DWP-AEKILAK---TGIRERR--IAA---------PR-----ETAADLAY   85 (365)
T ss_dssp             --CEEEEEEEEEECCSEEEEHHHHHHHCT-TCC-HHHHHHH---HCCCEEE--ECC---------TT-----CCHHHHHH
T ss_pred             eeccEEEEEEEEeCCCcEEcHHHHHHHcc-CCC-HHHHHHh---cCccEEE--ECC---------CC-----CCHHHHHH
Confidence            45789999999999986 67777766541 111 0000 00   0111111  000         00     12467899


Q ss_pred             HHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCC--C
Q 024765          146 VAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWT--G  223 (263)
Q Consensus       146 ~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--G  223 (263)
                      +++.+||+++|++++.++       .|++|+..++.                        ..+ ..+.+|+..+|+.  .
T Consensus        86 ~Aa~~aL~~ag~~~~~Id-------~vi~~t~~~~~------------------------~~p-~~a~~v~~~lGl~~~~  133 (365)
T 3gwa_A           86 EAARKLFAQGAVGADQVD-------FVILCTQAPDY------------------------VLP-TSACMLQHRLGIPTHA  133 (365)
T ss_dssp             HHHHHHHHTTSCCGGGCC-------EEEEEESSCSC------------------------SBS-CHHHHHHHHTTCCTTS
T ss_pred             HHHHHHHHHcCCCHHHCC-------EEEEEeCCCCC------------------------CCC-cHHHHHHHHcCCCCCc
Confidence            999999999999875433       67888753210                        112 3578999999997  7


Q ss_pred             ccccccccchHHHHHHHHHHHHHHhcccc-eEeeccCC
Q 024765          224 PSYSISTACASSNYSILNATSHIIKGDTV-SNSPSSQA  260 (263)
Q Consensus       224 p~~tv~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~  260 (263)
                      |++.|+.+|+|++.||..|+++|++|.++ ++|+|+|.
T Consensus       134 ~~~~v~~~C~s~~~Al~~A~~~i~~g~~~~vLvvg~e~  171 (365)
T 3gwa_A          134 GALDVNLGCSGYVYGLSLAKGLVETGAARCVLLLTADT  171 (365)
T ss_dssp             EEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEEC
T ss_pred             eEEEecccChHHHHHHHHHHHHHHcCCCCEEEEEEEch
Confidence            99999999999999999999999999998 45777774

>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A

Probab=99.05  E-value=2.7e-10  Score=103.53  Aligned_cols=99  Identities=16%  Similarity=0.029  Sum_probs=78.9

Q ss_pred             CHHHHhhcCHHHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccch
Q 024765          130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTN  209 (263)
Q Consensus       130 ~~~~~~~~d~~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (263)
                      ..+.....+....|+.+|+.+||+++|++++.++       .|+++++.+                     +     ...
T Consensus        92 ~~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~dId-------~vi~~t~t~---------------------~-----~~p  138 (393)
T 3ov2_A           92 DDRQDIVVEEIPRLAKEAAEKAIKEWGRPKSEIT-------HLVFCSISG---------------------I-----DMP  138 (393)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCC-------EEEEEESSC---------------------C-----CBS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEEeCC---------------------C-----CCC
Confidence            3455555667889999999999999999865433       578887631                     1     112


Q ss_pred             HHHHHHHHHhCCCCc---cccccccchHHHHHHHHHHHHHHhcccc-eEeeccCCC
Q 024765          210 MASAVLAMDLGWTGP---SYSISTACASSNYSILNATSHIIKGDTV-SNSPSSQAD  261 (263)
Q Consensus       210 ~~a~~ia~~lgl~Gp---~~tv~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~~  261 (263)
                      ..+.+|+..||+.+.   ++.|+.+|+++++||..|.++|++|.++ ++|+|+|..
T Consensus       139 ~~a~~v~~~LGl~~~~~~~~~v~~~C~g~~~al~~A~~~i~sg~~~~vLvvg~E~~  194 (393)
T 3ov2_A          139 GADYRLATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAENNRGARVLVVACEIT  194 (393)
T ss_dssp             CHHHHHHHHHTCCTTSEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECG
T ss_pred             CHHHHHHHHcCCCCCcceeeEEcCccHHHHHHHHHHHHHHHcCCCCEEEEEEEecc
Confidence            468899999999985   6999999999999999999999999997 567888753

>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}

Probab=99.02  E-value=2.3e-10  Score=104.49  Aligned_cols=90  Identities=12%  Similarity=0.054  Sum_probs=67.9

Q ss_pred             HHHHHHHHHHHHHHH-cCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHH
Q 024765          140 YLIYALVAGKKALVD-AGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMD  218 (263)
Q Consensus       140 ~~~l~l~aa~~Al~d-AGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~  218 (263)
                      ...|+++++++||+| ||++++.++       +|++|+....                        +.....++.+++..
T Consensus        32 ~~~L~~~A~~~AL~~~AGl~~~dId-------~vi~g~~~~~------------------------~~~~~~~a~~va~~   80 (407)
T 3svk_A           32 PLNLVVGLVDELRRRYPDLDETLIS-------DMILGVVSPV------------------------GDQGGDIARTAVLA   80 (407)
T ss_dssp             HHHHHHHHHHHHHHHSTTCCGGGEE-------EEEEECC--------------------------------CHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcCcCHHHCC-------EEEEEecCcc------------------------ccccCcHHHHHHHH
Confidence            366899999999999 999976533       6888875311                        00113457899999


Q ss_pred             hCC--CCccccccccchHHHHHHHHHHHHHHhcccceE-eeccCC
Q 024765          219 LGW--TGPSYSISTACASSNYSILNATSHIIKGDTVSN-SPSSQA  260 (263)
Q Consensus       219 lgl--~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~  260 (263)
                      +|+  .+|+++|+++|+|++.||+.|+++|++|++|++ |+|+|.
T Consensus        81 lGlp~~~pa~~v~~~Css~~~Al~~A~~~I~sG~~d~vLv~G~e~  125 (407)
T 3svk_A           81 AGLPETTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGVES  125 (407)
T ss_dssp             TTCCTTCEEEEEC---CBSCCHHHHHHHHHHHTSCCEEEEEEEEC
T ss_pred             cCCCCCCceEEecCcChhHHHHHHHHHHHHHcCCCCEEEEEEEcc
Confidence            999  789999999999999999999999999999965 566664

>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}

Probab=98.87  E-value=1.8e-08  Score=93.33  Aligned_cols=90  Identities=13%  Similarity=0.141  Sum_probs=70.8

Q ss_pred             CHHHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHH
Q 024765          138 DKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAM  217 (263)
Q Consensus       138 d~~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~  217 (263)
                      .....|+.+|+.+||++||++++.++       .|+++++. +                         ......+.+|+.
T Consensus       108 ~~a~~La~~Aa~~AL~~agi~~~dId-------~li~~t~t-~-------------------------~~~P~~a~~v~~  154 (465)
T 3e1h_A          108 SDGVPLAVEASRKAMAEARLVPAQIT-------HMVSTTCT-D-------------------------SANPGYDHYVAK  154 (465)
T ss_dssp             HHTHHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSS-C-------------------------CCSSCHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeeC-C-------------------------CCCCcHHHHHHH
Confidence            33468999999999999999865433       57777653 1                         112245889999


Q ss_pred             HhCCCC-c-cccc-cccchHHHHHHHHHHHHHHh----cccc-eEeeccCC
Q 024765          218 DLGWTG-P-SYSI-STACASSNYSILNATSHIIK----GDTV-SNSPSSQA  260 (263)
Q Consensus       218 ~lgl~G-p-~~tv-~tACsSsl~Al~~A~~~Lr~----G~~d-~~v~Gae~  260 (263)
                      .||++. + .+.| ..+|+++++||..|.++|+.    |.++ ++|+|+|.
T Consensus       155 ~LGl~~~~~~~dv~~~~Csgg~~AL~~A~~~i~a~~~~G~~~~vLVvg~E~  205 (465)
T 3e1h_A          155 ELGLSDRLEKVLLHGIGCSGGLAALRTAANLCLGHTARGKPARILVLALEV  205 (465)
T ss_dssp             HHTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEEC
T ss_pred             HhCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcccccCCCCEEEEEEEee
Confidence            999987 4 5888 79999999999999999997    9997 66888875

>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*

Probab=98.86  E-value=7.1e-09  Score=92.98  Aligned_cols=90  Identities=14%  Similarity=0.006  Sum_probs=69.4

Q ss_pred             HHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 024765          140 YLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (263)
Q Consensus       140 ~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l  219 (263)
                      ...|+.+++.+||+++|++++.++       .|++|+...                  ..+.    ..  .++.+|+..+
T Consensus        54 ~~~La~~Aa~~aL~~ag~~~~dId-------~vi~~t~~~------------------~~~d----~~--~~a~~v~~~l  102 (357)
T 3s3l_A           54 PPRMAARAARAALGRGDVDPADVS-------LVLHSSLWF------------------QGID----LW--PAASYVAHEA  102 (357)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGEE-------EEEEECSSC------------------CSSS----SS--CHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccC------------------CCcc----cc--cHHHHHHHHh
Confidence            467899999999999999864322       466666420                  0010    01  2478899999


Q ss_pred             CCCC-ccccccccchHHHHHHHHHHHHHHhcccc---eEeeccCC
Q 024765          220 GWTG-PSYSISTACASSNYSILNATSHIIKGDTV---SNSPSSQA  260 (263)
Q Consensus       220 gl~G-p~~tv~tACsSsl~Al~~A~~~Lr~G~~d---~~v~Gae~  260 (263)
                      |+.. |++.|+.+|+|++.||..|.++|+.|.++   ++|+|+|.
T Consensus       103 G~~~~~~~~v~~aC~~~~~al~~A~~~i~sg~~~~~~vLvvg~e~  147 (357)
T 3s3l_A          103 VGRHVPAFGLAQRCNGGMGAIELAGAYLGSGIGAGHAALLTTGDR  147 (357)
T ss_dssp             TCSSSCEEEEECGGGHHHHHHHHHHHHHHTTSSSSSEEEEEEEEC
T ss_pred             CCCCCcEEEEcCccHHHHHHHHHHHHHHHcCCCCCCEEEEEEEec
Confidence            9964 89999999999999999999999999998   55788875

>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}

Probab=98.86  E-value=8.6e-09  Score=91.18  Aligned_cols=89  Identities=19%  Similarity=0.175  Sum_probs=71.3

Q ss_pred             HHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 024765          140 YLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (263)
Q Consensus       140 ~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l  219 (263)
                      ...|+.+++.+||+++|++++.++       .|++|+..+.                        ...+ ..+.+|+..+
T Consensus        58 ~~~La~~Aa~~aL~~ag~~~~~Id-------~vi~~t~~~~------------------------~~~p-~~a~~v~~~l  105 (323)
T 3il3_A           58 VATMGFEAAKNAIEAAQINPQDIE-------LIIVATTSHS------------------------HAYP-SAACQVQGLL  105 (323)
T ss_dssp             HHHHHHHHHHHHHHHHCCCGGGCC-------EEEEECSCCS------------------------CSSS-CHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeCCCC------------------------CCCc-cHHHHHHHHh
Confidence            367899999999999999865433       6788876421                        1112 3688999999


Q ss_pred             CCC-CccccccccchHHHHHHHHHHHHHHhcccc-eEeeccCC
Q 024765          220 GWT-GPSYSISTACASSNYSILNATSHIIKGDTV-SNSPSSQA  260 (263)
Q Consensus       220 gl~-Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~  260 (263)
                      |++ .|++.|+.+|+|++.||..|+++|+.|.++ ++|+|+|.
T Consensus       106 Gl~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~  148 (323)
T 3il3_A          106 NIDDAISFDLAAACTGFVYALSVADQFIRAGKVKKALVIGSDL  148 (323)
T ss_dssp             TCSSCEEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEE
T ss_pred             CCCCccEEEECCccHHHHHHHHHHHHHHHCCCCCEEEEEEeec
Confidence            995 589999999999999999999999999998 45677774

>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}

Probab=98.85  E-value=8.1e-09  Score=92.45  Aligned_cols=89  Identities=16%  Similarity=0.109  Sum_probs=71.6

Q ss_pred             HHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 024765          140 YLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (263)
Q Consensus       140 ~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l  219 (263)
                      ...|+.+++.+||+++|++++.++       .|++|+..++.                         .....+.+|+..+
T Consensus        66 ~~~La~~Aa~~aL~~agi~~~~Id-------~vi~~t~~~~~-------------------------~~p~~a~~v~~~l  113 (354)
T 4efi_A           66 AGDLCRKAGEKLLAGLGWQADSID-------ALIFVSQTPNY-------------------------RLPATAFVLQAEL  113 (354)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSSCSC-------------------------SSSCHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeCCCCC-------------------------CCCcHHHHHHHHc
Confidence            357899999999999999875433       68888764211                         1124578999999


Q ss_pred             CC--CCccccccccchHHHHHHHHHHHHHHhcccc-eEeeccCC
Q 024765          220 GW--TGPSYSISTACASSNYSILNATSHIIKGDTV-SNSPSSQA  260 (263)
Q Consensus       220 gl--~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~  260 (263)
                      |+  +.|++.|+.+|+|++.||..|+++|++|.++ ++|+|+|.
T Consensus       114 Gl~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~  157 (354)
T 4efi_A          114 DLPASCLALDINLGCSGYPQALWLGMNLIQTGAAKRVLLAVGDT  157 (354)
T ss_dssp             TCCTTSEEEEECCCTTHHHHHHHHHHHHHHTTSCSEEEEEEEEC
T ss_pred             CcCCCccEEeeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEech
Confidence            99  4789999999999999999999999999998 45677774

>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*

Probab=98.82  E-value=3.5e-08  Score=91.11  Aligned_cols=137  Identities=11%  Similarity=0.069  Sum_probs=90.8

Q ss_pred             CcEEEEecceeCCcC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHH
Q 024765           70 RRIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (263)
Q Consensus        70 ~~VaItG~g~~~p~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa  148 (263)
                      ++|.|.|+|..+|.- .+.+++-+.+  |.+     +.|-......+.....+         +.     .....|+..|+
T Consensus         2 ~~v~I~~ig~y~P~~~v~~~~l~~~~--g~~-----~~~~~~g~G~~~~~~~~---------~~-----e~~~~La~~Aa   60 (450)
T 2f82_A            2 KNVGILAMDIYFPPTCVQQEALEAHD--GAS-----KGKYTIGLGQDCLAFCT---------EL-----EDVISMSFNAV   60 (450)
T ss_dssp             CSCEEEEEEEECCSEEEEHHHHHHHT--TCC-----TTTTTTTSCCCEEECCC---------TT-----CCHHHHHHHHH
T ss_pred             CceEEEEEEEECCCeeccHHHHHHHh--CCC-----HHHhhhhhCceeeeeCC---------CC-----CCHHHHHHHHH
Confidence            358899999999987 5666665543  221     11111111111111110         11     12357899999


Q ss_pred             HHHHHHcCCCCcccCcCCCCceE-EEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCC----CC
Q 024765          149 KKALVDAGITEQVSGELDKSRCG-VIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGW----TG  223 (263)
Q Consensus       149 ~~Al~dAGl~~~~~~~~~~~r~g-v~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl----~G  223 (263)
                      .+||+++|++++        +++ |++|+..+.                         .....++..|+..||+    ..
T Consensus        61 ~~aL~~agi~~~--------~Id~li~~t~t~~-------------------------~~~p~~a~~v~~~lgl~g~~~~  107 (450)
T 2f82_A           61 TSLLEKYKIDPK--------QIGRLEVGSETVI-------------------------DKSKSIKTFLMQLFEKCGNTDV  107 (450)
T ss_dssp             HHHHHHTTCCGG--------GEEEEEEECCCCS-------------------------CSSSCHHHHHTHHHHTTTCCCC
T ss_pred             HHHHHHcCcCHH--------HCCEEEEEecCCC-------------------------CCCCcHHHHHHHHhCCcCCCCc
Confidence            999999999853        444 445665311                         1123567889999998    46


Q ss_pred             ccccccccchHHHHHHHHHHHHHHhccc--c-eEeeccCC
Q 024765          224 PSYSISTACASSNYSILNATSHIIKGDT--V-SNSPSSQA  260 (263)
Q Consensus       224 p~~tv~tACsSsl~Al~~A~~~Lr~G~~--d-~~v~Gae~  260 (263)
                      +++.|+++|+|++.||..|.++|++|.+  + ++|+|+|.
T Consensus       108 ~~~~v~~aC~gg~~AL~~A~~~I~sg~~~~~~vLVvg~e~  147 (450)
T 2f82_A          108 EGVDSTNACYGGTAALLNCVNWVESNSWDGRYGLVICTDS  147 (450)
T ss_dssp             BCCEECSGGGHHHHHHHHHHHHHHSTTCCSCEEEEEEEEE
T ss_pred             eEEEhhhhhHHHHHHHHHHHHHHHcCCCcCCeEEEEEeee
Confidence            8899999999999999999999999997  6 56778774

>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*

Probab=98.81  E-value=1.8e-08  Score=90.46  Aligned_cols=88  Identities=14%  Similarity=0.145  Sum_probs=70.6

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+.+++.+||+++|++++.++       .|++|+..+.                        ...+ ..+.+|+..+|
T Consensus        75 ~~La~~Aa~~aL~~agl~~~dId-------~vi~~t~~~~------------------------~~~p-~~a~~v~~~lG  122 (359)
T 3h78_A           75 SALMVPAARQAIEAAGLLPEDID-------LLLVNTLSPD------------------------HHDP-SQACLIQPLLG  122 (359)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCC-------EEEEECSSCS------------------------SSBS-CHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhcCCCHHHCC-------EEEEEeCCCC------------------------CCCC-cHHHHHHHHcC
Confidence            57899999999999999865433       6788875321                        0112 35889999999


Q ss_pred             CCC-ccccccccchHHHHHHHHHHHHHHhcccce-EeeccCC
Q 024765          221 WTG-PSYSISTACASSNYSILNATSHIIKGDTVS-NSPSSQA  260 (263)
Q Consensus       221 l~G-p~~tv~tACsSsl~Al~~A~~~Lr~G~~d~-~v~Gae~  260 (263)
                      ++. |++.|+.+|+|++.||..|+.+|+.|.++. +|+|+|.
T Consensus       123 l~~~~~~~v~~aC~s~~~Al~~A~~~i~sG~~~~vLvvg~e~  164 (359)
T 3h78_A          123 LRHIPVLDIRAQASGLLYGLQMARGQILAGLARHVLVVCGEV  164 (359)
T ss_dssp             CCSCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEE
T ss_pred             CCCCcEEEECCHhHHHHHHHHHHHHHHHCCCcCEEEEEEEch
Confidence            974 899999999999999999999999999984 5677764

>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}

Probab=98.60  E-value=1.6e-07  Score=83.63  Aligned_cols=88  Identities=26%  Similarity=0.347  Sum_probs=69.8

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      .-|+.+|+.+||+++|++++.++       .|+++++.+.                         ......+..|...||
T Consensus        63 ~~la~~Aa~~aL~~ag~~~~dId-------~li~~t~t~~-------------------------~~~P~~a~~v~~~LG  110 (350)
T 4ewp_A           63 PVMAVGAAREALERAGLQGSDLD-------AVIVSTVTFP-------------------------HATPSAAALVAHEIG  110 (350)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCS-------EEEEECSCCS-------------------------CSSSCHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccCC-------------------------CCCCchHHHHHHHhC
Confidence            45899999999999999965433       4667765321                         111245788999999


Q ss_pred             CCC-ccccccccchHHHHHHHHHHHHHHhcccc-eEeeccCC
Q 024765          221 WTG-PSYSISTACASSNYSILNATSHIIKGDTV-SNSPSSQA  260 (263)
Q Consensus       221 l~G-p~~tv~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~  260 (263)
                      ++. +++.|+.+|+++++||..|..+|++|..+ ++|+|+|.
T Consensus       111 l~~~~a~di~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~E~  152 (350)
T 4ewp_A          111 ATPAPAYDVSAACAGYCYGVAQADALVRSGTARHVLVVGVER  152 (350)
T ss_dssp             CTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEE
T ss_pred             CCCceEEEeecchhhHHHHHHHhhhhhhCCCccceeEeeeee
Confidence            975 78899999999999999999999999996 66888773

>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A

Probab=98.58  E-value=1.7e-07  Score=82.86  Aligned_cols=83  Identities=19%  Similarity=0.133  Sum_probs=65.4

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+.+|+.+||++||+++++++       .|++|+...                     .       ...+..++..++
T Consensus        56 sdLa~~Aa~~AL~~AGi~~~DID-------~II~gt~t~---------------------q-------~~~A~~va~~Lg  100 (347)
T 3lma_A           56 RKLMEDAVQSALSKQNLKKEDID-------IFLAGDLLN---------------------Q-------NVTANYVARHLK  100 (347)
T ss_dssp             HHHHHHHHHHHHHTTTCCGGGCS-------EEEEEESSS---------------------S-------STTHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeCCC---------------------c-------hhHHHHHHHHhC
Confidence            56899999999999999976544       577776531                     0       114566777774


Q ss_pred             CCCccccccccchHHHHHHHHHHHHHHhcccc-eEeeccCC
Q 024765          221 WTGPSYSISTACASSNYSILNATSHIIKGDTV-SNSPSSQA  260 (263)
Q Consensus       221 l~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~  260 (263)
                        -|.+.|+++|+|+++||..|..+|++|.+| ++|+|+|-
T Consensus       101 --ipafdV~~ACsg~~~AL~~Aa~~I~sG~~~~VLVVGaE~  139 (347)
T 3lma_A          101 --IPFLCLFGACSTSMESIAISSALIDGGFAKRALAATSSH  139 (347)
T ss_dssp             --CCEEEBCCSTTHHHHHHHHHHHHHHTTSCSEEEEEEEEC
T ss_pred             --CCEEEecChhHHHHHHHHHHHHHHhcCCCCEEEEEEecc
Confidence              489999999999999999999999999998 45677773

>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}

Probab=98.57  E-value=2e-07  Score=85.09  Aligned_cols=90  Identities=20%  Similarity=0.119  Sum_probs=71.6

Q ss_pred             CHHHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHH
Q 024765          138 DKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAM  217 (263)
Q Consensus       138 d~~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~  217 (263)
                      .....|+.+|+.+||+++|++++.++       .|+++++.+                     +    .. ...+.+|+.
T Consensus       135 ~~~~~La~~Aa~~AL~~agi~~~dId-------~li~~t~t~---------------------~----~~-P~~a~~v~~  181 (413)
T 3v7i_A          135 EAVQAYGERAARGALQIAGLDVADVD-------CLITSNSTT---------------------P----AL-PGLDVALAN  181 (413)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCGGGCC-------EEEEECCSS---------------------C----CS-SCHHHHHHH
T ss_pred             cCHHHHHHHHHHHHHHHhCcCHHHCC-------EEEEEccCC---------------------C----Cc-CHHHHHHHH
Confidence            34667999999999999999865433       678887642                     1    11 235789999


Q ss_pred             HhCCCC--ccccc-cccchHHHHHHHHHHHHHHhcccc-eEeeccCC
Q 024765          218 DLGWTG--PSYSI-STACASSNYSILNATSHIIKGDTV-SNSPSSQA  260 (263)
Q Consensus       218 ~lgl~G--p~~tv-~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~  260 (263)
                      .+|+++  +.+.| +.+|+|++.||..|.++|++|.++ ++|+|+|.
T Consensus       182 ~LGl~~~~~~~~v~~~~Cagg~~AL~~A~~~i~ag~~~~vLvvg~E~  228 (413)
T 3v7i_A          182 RLPLRGDTMLLPATQWACVAGTRSLALAADLVAADPDRVVLVVISEA  228 (413)
T ss_dssp             HTTCCTTCEEEEESSCGGGHHHHHHHHHHHHHHHCTTCEEEEEEEEC
T ss_pred             HhCCCCCceEEEeeCCccHHHHHHHHHHHHHHhcCCCCEEEEEEEec
Confidence            999987  35777 999999999999999999999997 56788875

>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A*

Probab=98.56  E-value=1.3e-07  Score=85.56  Aligned_cols=136  Identities=14%  Similarity=0.086  Sum_probs=89.1

Q ss_pred             CcEEEEecceeCCcC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHH
Q 024765           70 RRIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (263)
Q Consensus        70 ~~VaItG~g~~~p~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa  148 (263)
                      ++|.|.|+|...|.- .+.+++-+.+  |.+. ..+.  ..-+...+.   +.        .+.     .....|+.+|+
T Consensus         6 m~v~I~~~g~y~P~~~v~~~~l~~~~--g~~~-~~~~--~~~Gi~~r~---~~--------~~~-----e~~~~La~~Aa   64 (388)
T 3v4n_A            6 MTIGIDKISFFVPPYYIDMTALAEAR--NVDP-GKFH--IGIGQDQMA---VN--------PIS-----QDIVTFAANAA   64 (388)
T ss_dssp             CCEEEEEEEEECCSEEEEHHHHHHHT--TSCT-HHHH--TTTCCCEEE---CC--------CTT-----CCHHHHHHHHH
T ss_pred             eeEEEEEEEEECCCeEEcHHHHHHHh--CCCH-HHHH--HHhCceEEE---EC--------CCC-----CCHHHHHHHHH
Confidence            479999999999986 5666665543  2110 0000  000111000   00        011     11357899999


Q ss_pred             HHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCCC--ccc
Q 024765          149 KKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTG--PSY  226 (263)
Q Consensus       149 ~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G--p~~  226 (263)
                      .+||+++|  ++.++       .|++|+..+..                        .. ...+..|+..||+++  +++
T Consensus        65 ~~aL~~a~--~~~Id-------~li~~t~t~~~------------------------~~-ps~a~~v~~~LGl~~~~~~~  110 (388)
T 3v4n_A           65 EAILTKED--KEAID-------MVIVGTESSID------------------------ES-KAAAVVLHRLMGIQPFARSF  110 (388)
T ss_dssp             HTTCCHHH--HHHEE-------EEEEECSSCSB------------------------SS-SCHHHHHHHHTTCCSSCEEE
T ss_pred             HHHHHhCC--cccCC-------EEEEEeccCCC------------------------cC-ccHHHHHHHHcCCCCCceEe
Confidence            99999987  32222       46677653211                        11 245889999999986  889


Q ss_pred             cccccchHHHHHHHHHHHHHHhcccc-eEeeccCC
Q 024765          227 SISTACASSNYSILNATSHIIKGDTV-SNSPSSQA  260 (263)
Q Consensus       227 tv~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~  260 (263)
                      .|..+|++++.||..|..+|++|.++ ++|+|+|.
T Consensus       111 dv~~aC~gg~~AL~~A~~~i~sg~~~~vLVvg~e~  145 (388)
T 3v4n_A          111 EIKEAXYGATAGLQLAKNHVALHPDKKVLVVAADI  145 (388)
T ss_dssp             EEESGGGHHHHHHHHHHHHHHHCTTCEEEEEEEEE
T ss_pred             ehhhhhhHHHHHHHHHHHHHhcCCCCEEEEEEehh
Confidence            99999999999999999999999997 56788774

>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*

Probab=98.55  E-value=6.3e-08  Score=87.93  Aligned_cols=134  Identities=13%  Similarity=0.077  Sum_probs=86.6

Q ss_pred             cEEEEecceeCCcC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHHH
Q 024765           71 RIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGK  149 (263)
Q Consensus        71 ~VaItG~g~~~p~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa~  149 (263)
                      +|.|.|+|...|.- .+.+++.+.+  |.+. ..+.  ...+...+.  ..+         +.     .....|++.++.
T Consensus         2 ~v~I~~ig~y~P~~~v~~~~l~~~~--~~~~-~~i~--~~~Gi~~r~--~~~---------~~-----e~~~~la~~Aa~   60 (396)
T 1xpm_A            2 AIGIDKINFYVPKYYVDMAKLAEAR--QVDP-NKFL--IGIGQTEMA--VSP---------VN-----QDIVSMGANAAK   60 (396)
T ss_dssp             CEEEEEEEEECCSEEEEHHHHHHHT--TSCH-HHHH--TTTCCSEEE--ECC---------TT-----CCHHHHHHHHHH
T ss_pred             ceEEEEEEEeCCCeEecHHHHHHHh--CCCH-HHHh--hhcCceEEE--eCC---------CC-----CCHHHHHHHHHH
Confidence            48899999999976 5666665543  2110 0000  000111111  010         00     124578999999


Q ss_pred             HHHHHcCCCCcccCcCCCCceEE-EEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCC--Cccc
Q 024765          150 KALVDAGITEQVSGELDKSRCGV-IIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWT--GPSY  226 (263)
Q Consensus       150 ~Al~dAGl~~~~~~~~~~~r~gv-~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~  226 (263)
                      +||++  ++        +.+++. ++|+..+.                        ... ..++..|+..||++  .|++
T Consensus        61 ~aL~~--~~--------~~~Id~li~~t~~~~------------------------~~~-p~~a~~v~~~lGl~~~~~~~  105 (396)
T 1xpm_A           61 DIITD--ED--------KKKIGMVIVATESAV------------------------DAA-KAAAVQIHNLLGIQPFARCF  105 (396)
T ss_dssp             TTCCH--HH--------HHHEEEEEEECSSCS------------------------BSS-SCHHHHHHHHTTCCSSCEEE
T ss_pred             HHHhc--CC--------HHHCCEEEEEeCCCC------------------------CCC-CCHHHHHHHHhCCCCCceEE
Confidence            99977  33        245654 55665321                        011 23678999999997  4999


Q ss_pred             cccccchHHHHHHHHHHHHHHhcccc-eEeeccCC
Q 024765          227 SISTACASSNYSILNATSHIIKGDTV-SNSPSSQA  260 (263)
Q Consensus       227 tv~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~  260 (263)
                      .|+++|+|++.||..|+++|++|.+| ++|+|+|.
T Consensus       106 ~v~~aC~sg~~Al~~A~~~I~sg~~~~vLvvg~e~  140 (396)
T 1xpm_A          106 EMKEACYAATPAIQLAKDYLATRPNEKVLVIATDT  140 (396)
T ss_dssp             EEESTTTTHHHHHHHHHHHHTTCTTCEEEEEEEEE
T ss_pred             EeccccHHHHHHHHHHHHHHHcCCCCEEEEEeehh
Confidence            99999999999999999999999997 55778773

>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}

Probab=98.53  E-value=8.5e-08  Score=90.03  Aligned_cols=99  Identities=16%  Similarity=0.044  Sum_probs=66.3

Q ss_pred             HHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCC
Q 024765          142 IYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGW  221 (263)
Q Consensus       142 ~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl  221 (263)
                      .|+.+++++||+|||++++.++.   -=.|++++....       +.          ............++..++..+|+
T Consensus        44 dL~a~Ai~~AL~dAGl~p~~Vd~---vI~g~~~~~~~~-------~~----------~~~~~~~g~~~~~~~~va~~lGl  103 (520)
T 4egv_A           44 ELATEAAKAALHDCGADADTVAR---AIDTVAGTRQFE-------IS----------GPASAPLGVSSNYPRSVARNIGA  103 (520)
T ss_dssp             HHHHHHHHHHHHHTSSCHHHHHH---HCCEEEECCC-------------------------------CCHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHhCcCHHHcce---EEEEEeeccccc-------cc----------chhhhhhccccCHHHHHHHHcCC
Confidence            47889999999999999754321   123444433210       00          00001122234567889999999


Q ss_pred             CC-ccccccccchHHHHHHHHHHHHHHhcccceEe-eccCC
Q 024765          222 TG-PSYSISTACASSNYSILNATSHIIKGDTVSNS-PSSQA  260 (263)
Q Consensus       222 ~G-p~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~v-~Gae~  260 (263)
                      .+ +.++++.+|+|++.+|++|+++|+.|+||++| +|.|+
T Consensus       104 ~~~~~~~~~~~caSg~~av~~AA~aI~aG~advvlAgG~Es  144 (520)
T 4egv_A          104 DPAHAVLEVIGGQSPQHLATEFGGKIAAGENDVVLIFGSEN  144 (520)
T ss_dssp             CCSEEEECCSSTTHHHHHHHHHHHHHHTTSCSEEEEEEEEC
T ss_pred             CCceEEEecCCCHHHHHHHHHHHHHHHcCCCCEEEEEEEEe
Confidence            87 67889999999999999999999999999765 55554

>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}

Probab=98.42  E-value=1.8e-06  Score=80.25  Aligned_cols=135  Identities=11%  Similarity=0.059  Sum_probs=86.5

Q ss_pred             cEEEEecceeCCcC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHHH
Q 024765           71 RIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGK  149 (263)
Q Consensus        71 ~VaItG~g~~~p~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa~  149 (263)
                      .|.|.|+|..+|.- .+.+++.+.+  |.+     +.|-.......--+..         .+.     .....|+.+|+.
T Consensus        24 ~vgI~aig~y~P~~~v~~~el~~~~--g~~-----~~~~~~~~Gi~~r~~~---------~~~-----e~~~~La~~Aa~   82 (478)
T 2p8u_A           24 DVGIVALEIYFPSQYVDQAELEKYD--GVD-----AGKYTIGLGQAKMGFC---------TDR-----EDINSLCMTVVQ   82 (478)
T ss_dssp             CCEEEEEEEECCSEEEEHHHHHHHH--TCC-----TTCCCCCCCCCEEECC---------CTT-----CCHHHHHHHHHH
T ss_pred             ceEEEEEEEECCCeEecHHHHHHHh--CCC-----hhHhecccCceEEEeC---------CCC-----CCHHHHHHHHHH
Confidence            58999999999985 5777766553  221     1111111100000000         111     113578999999


Q ss_pred             HHHHHcCCCCcccCcCCCCceE-EEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCC---CC-c
Q 024765          150 KALVDAGITEQVSGELDKSRCG-VIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGW---TG-P  224 (263)
Q Consensus       150 ~Al~dAGl~~~~~~~~~~~r~g-v~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl---~G-p  224 (263)
                      +||+++|++++        +++ |++|+..+..                         .....+..|...|+.   .+ +
T Consensus        83 ~aL~~agi~~~--------dId~li~~T~t~~~-------------------------~~ps~a~~v~~~L~~lG~~~~~  129 (478)
T 2p8u_A           83 NLMERNNLSYD--------CIGRLEVGTETIID-------------------------KSKSVKTNLMQLFEESGNTDIE  129 (478)
T ss_dssp             HHHHHTTCCGG--------GEEEEEEECSCCSC-------------------------SSSCHHHHHGGGTTTTTCCCCB
T ss_pred             HHHHHcCCCHH--------HCCEEEEEccCCcc-------------------------cCccHHHHHHHHHhhcCCCCce
Confidence            99999999853        344 5566653210                         112346777755544   33 6


Q ss_pred             cccccccchHHHHHHHHHHHHHHhcc--cc-eEeeccC
Q 024765          225 SYSISTACASSNYSILNATSHIIKGD--TV-SNSPSSQ  259 (263)
Q Consensus       225 ~~tv~tACsSsl~Al~~A~~~Lr~G~--~d-~~v~Gae  259 (263)
                      ++.|..||++++.||..|..+|++|.  .+ ++|+|+|
T Consensus       130 ~~dv~~aC~gg~~AL~~A~~~i~sg~~~~~~aLVV~~E  167 (478)
T 2p8u_A          130 GIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGD  167 (478)
T ss_dssp             CCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEE
T ss_pred             EEEEcchhHHHHHHHHHHHHHHHcCCccCCEEEEEEee
Confidence            78899999999999999999999999  75 6688877

>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}

Probab=98.29  E-value=1.2e-06  Score=80.93  Aligned_cols=129  Identities=14%  Similarity=0.131  Sum_probs=83.4

Q ss_pred             CcEEEEecceeCCcC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHH
Q 024765           70 RRIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (263)
Q Consensus        70 ~~VaItG~g~~~p~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa  148 (263)
                      ++|-|.|+|...|.- .+.+++-+.+  |.+     +.|    +..+.|  +..   ..+.++.|     ...-|+..|+
T Consensus         4 ~~VgI~~~g~y~P~~~v~~~~l~~~~--~~~-----~~~----i~~~~G--i~~---r~~~~~~E-----~~~~ma~~Aa   62 (460)
T 2wya_A            4 KDVGILALEVYFPAQYVDQTDLEKYN--NVE-----AGK----YTVGLG--QTR---MGFCSVQE-----DINSLCLTVV   62 (460)
T ss_dssp             SSCEEEEEEEECCSEEEEHHHHHHHT--TCC-----TTC----CCCCCC--CCE---EECCCTTC-----CHHHHHHHHH
T ss_pred             CceEEEEEEEECCCeEEcHHHHHHHh--CCC-----HHH----HHHhhC--cEE---EEECCCCC-----CHHHHHHHHH
Confidence            679999999999987 5666664432  111     111    111111  000   00011111     1245899999


Q ss_pred             HHHHHHcCCCCcccCcCCCCceE-EEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCCC----
Q 024765          149 KKALVDAGITEQVSGELDKSRCG-VIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTG----  223 (263)
Q Consensus       149 ~~Al~dAGl~~~~~~~~~~~r~g-v~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G----  223 (263)
                      .+||+++|++++        +++ |++|+.++..                        . .-..+..|...||+.|    
T Consensus        63 ~~al~~a~i~~~--------~Id~ii~aT~t~~~------------------------~-~ps~a~~v~~~l~~~g~~~~  109 (460)
T 2wya_A           63 QRLMERIQLPWD--------SVGRLEVGTETIID------------------------K-SKAVKTVLMELFQDSGNTDI  109 (460)
T ss_dssp             HHHHHHHTCCGG--------GEEEEEEECSCCSC------------------------S-SSCHHHHHGGGTGGGTCCCC
T ss_pred             HHHHHHcCCCHH--------HCCEEEEEeCCCCC------------------------C-CCchHHHHHHHHhccCCCCe
Confidence            999999999864        455 6677754211                        1 1235778888888765    


Q ss_pred             ccccccccchHHHHHHHHHHHHHHhcccc
Q 024765          224 PSYSISTACASSNYSILNATSHIIKGDTV  252 (263)
Q Consensus       224 p~~tv~tACsSsl~Al~~A~~~Lr~G~~d  252 (263)
                      +++-+..||+++++||..|..+|++|..+
T Consensus       110 ~a~D~~~aC~g~~~al~~A~~~i~~g~~~  138 (460)
T 2wya_A          110 EGIDTTNACYGGTASLFNAANWMESSSWD  138 (460)
T ss_dssp             BCCEEESGGGHHHHHHHHHHHHHTSTTCC
T ss_pred             eEechhhhhhhHHHHHHHHHHHHHhcccc
Confidence            35778999999999999999999999875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	263
d1j3na1	249	c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {	2e-37
d2gfva1	250	c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {	1e-32
d1ox0a1	256	c.95.1.1 (A:-5-251) Beta-ketoacyl-ACP synthase II	5e-28
d1e5ma1	250	c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {	2e-27
d2vbaa1	253	c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {E	4e-21
d2ix4a1	270	c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II	4e-19
d1tqya1	216	c.95.1.1 (A:3-218) Actinorhodin polyketide putativ	3e-18
d1tqyb1	208	c.95.1.1 (B:2-209) Actinorhodin polyketide putativ	4e-14

>d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Length = 249

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thermus thermophilus [TaxId: 274]

 Score =  130 bits (327), Expect = 2e-37
 Identities = 70/182 (38%), Positives = 109/182 (59%), Gaps = 5/182 (2%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           RR+VVTGLGA+TP+G     FH + L G +G+  I  FD S  P RIAAE+     G ++
Sbjct: 2   RRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPITRFDASALPVRIAAEVDV-DPGAYL 60

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K  ++ D+++ YAL+A + AL DAG+  +   +LD  R G ++G+ +GG+        
Sbjct: 61  DRKELRRLDRFVQYALIAAQLALEDAGLKPE---DLDPERVGTLVGTGIGGMETWEAQSR 117

Query: 190 -AIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIK 248
             ++    ++SPF+IP  + NMASA +AM  G+TGPS ++ TACA+   ++ +A   I  
Sbjct: 118 VFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSSTVVTACATGADALGSALRMIQL 177

Query: 249 GD 250
           G+
Sbjct: 178 GE 179

>d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Length = 250

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Escherichia coli [TaxId: 562]

 Score =  117 bits (294), Expect = 1e-32
 Identities = 66/182 (36%), Positives = 105/182 (57%), Gaps = 4/182 (2%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           RR+VVTGLG ++P+G+       +LL G +GIS I  FD S + T+ A  +K  +    I
Sbjct: 2   RRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDII 61

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
           S K  +K D ++ Y +VAG +A+ D+G+      E + +R G  IGS +GGL ++ +   
Sbjct: 62  SRKEQRKMDAFIQYGIVAGVQAMQDSGLEIT---EENATRIGAAIGSGIGGLGLIEENHT 118

Query: 190 AI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIK 248
           ++     +K+SPF++P ++ NM +  L +  G  GPS SI+TA  S  ++I +A   I  
Sbjct: 119 SLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATAQTSGVHNIGHAARIIAY 178

Query: 249 GD 250
           GD
Sbjct: 179 GD 180

>d1ox0a1 c.95.1.1 (A:-5-251) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} Length = 256

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Streptococcus pneumoniae [TaxId: 1313]

 Score =  105 bits (263), Expect = 5e-28
 Identities = 65/181 (35%), Positives = 97/181 (53%), Gaps = 4/181 (2%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
            R+VVTG G  +P+G+    F  SL  G  GI  I  FD S+F    AAEI+      + 
Sbjct: 9   NRVVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGITKFDHSDFDVHNAAEIQDFPFDKYF 68

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K   + D Y +YAL A ++A+  A +  +    L++ R GVI+ S +GG++ + D   
Sbjct: 69  VKKDTNRFDNYSLYALYAAQEAVNHANLDVE---ALNRDRFGVIVASGIGGIKEIEDQVL 125

Query: 190 AI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIK 248
            + +   K++ P  +P +L NMAS  +AM  G  G   SI+TAC+SSN +I +A   I  
Sbjct: 126 RLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVCKSINTACSSSNDAIGDAFRSIKF 185

Query: 249 G 249
           G
Sbjct: 186 G 186

>d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Length = 250

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Synechocystis sp. [TaxId: 1143]

 Score =  103 bits (258), Expect = 2e-27
 Identities = 65/182 (35%), Positives = 102/182 (56%), Gaps = 4/182 (2%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           +R+VVTGLGA+TP+G+    +   L+EG  GI  I  FD S+   R   E+K      ++
Sbjct: 2   KRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDATQFL 61

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K AK+ D++  +A+ A ++A+ DA +      EL+    GV+IG+ +GGL+VL D   
Sbjct: 62  DRKEAKRMDRFCHFAVCASQQAINDAKLVIN---ELNADEIGVLIGTGIGGLKVLEDQQT 118

Query: 190 AIKVS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIK 248
            +      + SPF IP  + NMAS + A++LG  GP+    TACA+ + +I +A   +  
Sbjct: 119 ILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGSNAIGDAFRLVQN 178

Query: 249 GD 250
           G 
Sbjct: 179 GY 180

>d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Length = 253

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase I
species: Escherichia coli [TaxId: 562]

 Score = 87.3 bits (215), Expect = 4e-21
 Identities = 57/183 (31%), Positives = 93/183 (50%), Gaps = 5/183 (2%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           +R V+TGLG V+ +G++      SL EG +GI+  Q    S   + +   +K   T G I
Sbjct: 2   KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVKL-DTTGLI 60

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K+ +      IYA ++ ++A+ DAG++ +     +  R G+I GS  G  R    G +
Sbjct: 61  DRKVVRFMSDASIYAFLSMEQAIADAGLSPE--AYQNNPRVGLIAGSGGGSPRFQVFGAD 118

Query: 190 AIKVS--YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
           A++     K + P+ +  ++ +  SA LA      G +YSIS+ACA+S + I NA   I 
Sbjct: 119 AMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQ 178

Query: 248 KGD 250
            G 
Sbjct: 179 LGK 181

>d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Length = 270

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]

 Score = 82.4 bits (202), Expect = 4e-19
 Identities = 57/198 (28%), Positives = 91/198 (45%), Gaps = 18/198 (9%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFD--------------CSEFPTR 115
           RR+VVTGLG VTPLG         L++G  GI  +   D                +  ++
Sbjct: 1   RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSK 60

Query: 116 IAAEIKSLSTGGWISPK---IAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGV 172
           +AA +   S  G         +K    ++ YA+ A  +AL DA        E +++   +
Sbjct: 61  VAAFVPYGSNPGEFDEALWLNSKAVANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSI 120

Query: 173 IIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTAC 232
             G       ++       +   +++SPF+IP  L NMAS  ++M  G+ GP+++  TAC
Sbjct: 121 GGGIGSIC-DIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVTAC 179

Query: 233 ASSNYSILNATSHIIKGD 250
           A+  +SI +AT  I  GD
Sbjct: 180 ATGAHSIGDATRMIQFGD 197

>d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Length = 216

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 78.9 bits (193), Expect = 3e-18
 Identities = 44/185 (23%), Positives = 74/185 (40%), Gaps = 4/185 (2%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           RR+V+TG+G   P G+    F   L  G T    I  FD S + +++AAE          
Sbjct: 1   RRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQVAAEADFDPVAEGF 60

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMG----GLRVLN 185
            P+   + D+   +A+   ++A   +G+                  +A         +L+
Sbjct: 61  GPRELDRMDRASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLS 120

Query: 186 DGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSH 245
           D     +V    +S     Y + ++  A +A  +G  GP   +ST C S   S+ NA   
Sbjct: 121 DSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAEGPVTMVSTGCTSGLDSVGNAVRA 180

Query: 246 IIKGD 250
           I +G 
Sbjct: 181 IEEGS 185

>d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Length = 208

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 67.4 bits (163), Expect = 4e-14
 Identities = 37/178 (20%), Positives = 71/178 (39%), Gaps = 2/178 (1%)

Query: 72  IVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISP 131
           +++TG+G V P G     + +++L+G  G+  +  FD S +P  +A +I        I  
Sbjct: 2   VLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVTRFDVSRYPATLAGQIDDFHAPDHIPG 61

Query: 132 KIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI 191
           ++  + D     AL A   AL DA    +     D     V   +  G      +  +  
Sbjct: 62  RLLPQTDPSTRLALTAADWALQDAKADPESLT--DYDMGVVTANACGGFDFTHREFRKLW 119

Query: 192 KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKG 249
               K +S +        + +  +++  G  GPS ++    A    ++ +A   I +G
Sbjct: 120 SEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSSALVAEQAGGLDALGHARRTIRRG 177

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	263
d2gfva1	250	Beta-ketoacyl-ACP synthase II {Escherichia coli [T	100.0
d1tqyb1	208	Actinorhodin polyketide putative beta-ketoacyl syn	100.0
d1ox0a1	256	Beta-ketoacyl-ACP synthase II {Streptococcus pneum	100.0
d1j3na1	249	Beta-ketoacyl-ACP synthase II {Thermus thermophilu	100.0
d1e5ma1	250	Beta-ketoacyl-ACP synthase II {Synechocystis sp. [	100.0
d1tqya1	216	Actinorhodin polyketide putative beta-ketoacyl syn	100.0
d2vbaa1	253	Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta	100.0
d2ix4a1	270	Beta-ketoacyl-ACP synthase II {Thale cress (Arabid	99.97
d1m3ka1	268	Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3	99.12
d1ulqa1	273	Beta-ketoadipyl CoA thiolase {Thermus thermophilus	99.04
d1wdkc1	262	Fatty oxidation complex beta subunit (3-ketoacyl-C	99.02
d1afwa1	269	Thiolase {Baker's yeast (Saccharomyces cerevisiae)	98.88
d1teda_	372	Polyketide synthase PKS18 {Mycobacterium tuberculo	98.69
d1mzja1	181	Priming beta-ketosynthase from the r1128 polyketid	98.65
d1hnja1	174	Ketoacyl-ACP synthase III (FabH) {Escherichia coli	98.64
d1ub7a1	172	Ketoacyl-ACP synthase III (FabH) {Thermus thermoph	98.6
d1u6ea1	184	Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu	98.56
d1u0ma1	200	Putative polyketide synthase SCO1206 {Streptomyces	98.37
d1bi5a1	235	Chalcone synthase {Alfalfa (Medicago sativa) [TaxI	98.08
d1xpma1	166	3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap	97.85

>d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=8.5e-42  Score=291.83  Aligned_cols=191  Identities=35%  Similarity=0.565  Sum_probs=177.8

Q ss_pred             CCcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHH
Q 024765           69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (263)
Q Consensus        69 ~~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa  148 (263)
                      ++||||||||+++|+|.++++||++|.+|+++|+++++|+...++.+++++|++|+....+++++.+.|||++++++.++
T Consensus         1 ~rrVaItG~G~vtp~G~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~l~aa   80 (250)
T d2gfva1           1 KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDIISRKEQRKMDAFIQYGIVAG   80 (250)
T ss_dssp             CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTCSCCEEECCTTCCCTTTSCHHHHTTSCHHHHHHHHHH
T ss_pred             CCeEEEECCeeECCCcCCHHHHHHHHHcCCCeeecCCcccccccCCccceecccchhhhhhhhHHHhhcCHHHHHHHHHH
Confidence            37899999999999999999999999999999999999999999999999999999888899999999999999999999


Q ss_pred             HHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCcccc
Q 024765          149 KKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYS  227 (263)
Q Consensus       149 ~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~t  227 (263)
                      ++||+|||+..   ++....++||++|++.++....+..+..+ ..+...+++..+++.+.|.++++|++.||++||+++
T Consensus        81 ~~Al~dAg~~~---~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~t  157 (250)
T d2gfva1          81 VQAMQDSGLEI---TEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSIS  157 (250)
T ss_dssp             HHHHHHHTCCC---CTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHTTCCSCEEC
T ss_pred             HHHHHhcCCCc---cccCccceEEEEeeccCCcchhhhhHHHHhhccccccccchhhhhhhhHHHHHHHHHhCCCCCccc
Confidence            99999999984   34778899999999999998888888877 777888999999999999999999999999999999


Q ss_pred             ccccchHHHHHHHHHHHHHHhcccceE-eeccCCCC
Q 024765          228 ISTACASSNYSILNATSHIIKGDTVSN-SPSSQADI  262 (263)
Q Consensus       228 v~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~~i  262 (263)
                      |++||+||+.||++|+++|++|+||++ |+|+|..+
T Consensus       158 v~~aCaSg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~  193 (250)
T d2gfva1         158 IATAQTSGVHNIGHAARIIAYGDADVMVAGGAEKAS  193 (250)
T ss_dssp             CCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCC
T ss_pred             cccccchhhhhhHHHHHHHHcCCcchhhcccchhhc
Confidence            999999999999999999999999965 55666655

>d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=1.6e-42  Score=288.37  Aligned_cols=189  Identities=23%  Similarity=0.352  Sum_probs=176.9

Q ss_pred             cEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHHHH
Q 024765           71 RIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGKK  150 (263)
Q Consensus        71 ~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa~~  150 (263)
                      .|||||||+++|+|.|+++||++|++|+++|+++++|+...++.++++++++|++.+++++++.+.|||++++++.++.|
T Consensus         1 ~VvITG~G~vsp~g~~~~~~w~~L~~G~sgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~   80 (208)
T d1tqyb1           1 SVLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVTRFDVSRYPATLAGQIDDFHAPDHIPGRLLPQTDPSTRLALTAADW   80 (208)
T ss_dssp             CEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECTTTTGGGSSCCEEECCCSCCHHHHSCTTTGGGCCHHHHHHHHHHHH
T ss_pred             CEEEEcceeECCCcCCHHHHHHHHHcCCCceecCcccCchhcccccccccccccccccCChhHhhccccccccccccccc
Confidence            39999999999999999999999999999999999999999999999999999988889999999999999999999999


Q ss_pred             HHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCcccccc
Q 024765          151 ALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSIS  229 (263)
Q Consensus       151 Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~tv~  229 (263)
                      ||+|||+.++   +....++|+++|++.|+....++.+..+ ..+.+...++.+...++|.++++|+++||++||+++|+
T Consensus        81 Al~~Ag~~~~---~~~~~~~g~~~g~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~tv~  157 (208)
T d1tqyb1          81 ALQDAKADPE---SLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSSALV  157 (208)
T ss_dssp             HHHHTTCCGG---GSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTCCSSCEEEE
T ss_pred             cchhhhcccc---cccccccccccccccccccccchhhhhhccccccccccccccccccccccchhhhcccccceeeecc
Confidence            9999999854   4778899999999999999999888888 77778899999999999999999999999999999999


Q ss_pred             ccchHHHHHHHHHHHHHHhcccce-EeeccCCCCC
Q 024765          230 TACASSNYSILNATSHIIKGDTVS-NSPSSQADIT  263 (263)
Q Consensus       230 tACsSsl~Al~~A~~~Lr~G~~d~-~v~Gae~~it  263 (263)
                      +||+||+.||+.|+++|++| ||+ +++|+|++|+
T Consensus       158 tACaS~l~Ai~~A~~~I~~G-~d~~lvGG~d~~l~  191 (208)
T d1tqyb1         158 AEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALD  191 (208)
T ss_dssp             CGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCS
T ss_pred             ccccHHHHHHHHHHHHHHcC-CCEEEECccccccC
Confidence            99999999999999999999 995 5678888775

>d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=5.3e-41  Score=286.79  Aligned_cols=190  Identities=38%  Similarity=0.674  Sum_probs=173.2

Q ss_pred             CCcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHH
Q 024765           69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (263)
Q Consensus        69 ~~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa  148 (263)
                      |+||||||||+++|.|.|+++||++|.+|+++|+++++|+...++.++++.++ +++..++++++.+.+||++++++.++
T Consensus         1 M~rVaItG~G~vsp~g~~~~e~w~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~~l~aa   79 (249)
T d1j3na1           1 MRRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPITRFDASALPVRIAAEVD-VDPGAYLDRKELRRLDRFVQYALIAA   79 (249)
T ss_dssp             CCCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECCC-CCGGGTSCHHHHTTSCHHHHHHHHHH
T ss_pred             CCcEEEECCEeECCCcCCHHHHHHHHHcCCCccccCCccccccCCcccccccc-ccccccccHHHHhhCCHHHHHHHHHH
Confidence            46899999999999999999999999999999999999999999888888764 56666689999999999999999999


Q ss_pred             HHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCcccc
Q 024765          149 KKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYS  227 (263)
Q Consensus       149 ~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~t  227 (263)
                      ++||+||||.++   .+.+.|+|||+|++.++.......+... +.+...++++.+...+.+.++++|+++|||+||+++
T Consensus        80 ~~Al~dAGl~~~---~~~~~~~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~gl~Gp~~t  156 (249)
T d1j3na1          80 QLALEDAGLKPE---DLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSST  156 (249)
T ss_dssp             HHHHHHHTCCGG---GSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCBCC
T ss_pred             HHHHHHcCCChh---HcCCccEEEEEEECCCcccccccccccccccCccccChhhhccccchhhhhhhHhhcCCCCCccc
Confidence            999999999954   4778899999999999999888877777 778889999999999999999999999999999999


Q ss_pred             ccccchHHHHHHHHHHHHHHhcccceE-eeccCCCC
Q 024765          228 ISTACASSNYSILNATSHIIKGDTVSN-SPSSQADI  262 (263)
Q Consensus       228 v~tACsSsl~Al~~A~~~Lr~G~~d~~-v~Gae~~i  262 (263)
                      |++||+||+.||++|+++|++|+||++ |+|+|.++
T Consensus       157 v~~aCaSsl~Ai~~A~~~i~~G~~d~alvgg~d~~~  192 (249)
T d1j3na1         157 VVTACATGADALGSALRMIQLGEADLVLAGGTEAAI  192 (249)
T ss_dssp             BCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCC
T ss_pred             cccccchHHHHHHHHHHHHHcCCCCeeeecchHhhh
Confidence            999999999999999999999999965 56666543

>d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Synechocystis sp. [TaxId: 1143]

Probab=100.00  E-value=1e-39  Score=278.24  Aligned_cols=191  Identities=35%  Similarity=0.598  Sum_probs=177.0

Q ss_pred             CCcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHH
Q 024765           69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (263)
Q Consensus        69 ~~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa  148 (263)
                      ++||||||||+++|+|.|+++||++|.+|+++|+++++|+...++.++.+.+++++..+.+++++.+.+||++++++.++
T Consensus         1 ~~rVaItG~G~v~p~G~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~~~~~~a~   80 (250)
T d1e5ma1           1 KKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDATQFLDRKEAKRMDRFCHFAVCAS   80 (250)
T ss_dssp             CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTSSCCEEECCCSCCGGGTSCHHHHHTSCHHHHHHHHHH
T ss_pred             CCeEEEECCeeECCCCCCHHHHHHHHHcCCCeeccCCccccccccccccceeeecccccccchhhhhhcCcHHHHHHHHH
Confidence            47899999999999999999999999999999999999999999999999999887777799999999999999999999


Q ss_pred             HHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCcccc
Q 024765          149 KKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYS  227 (263)
Q Consensus       149 ~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~t  227 (263)
                      ++||++||+.++   .+...+++|++|++.+........+..+ ..+....++..+...+.+.++++|++.||++||+++
T Consensus        81 ~~Al~~Agl~~~---~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~Gp~~t  157 (250)
T d1e5ma1          81 QQAINDAKLVIN---ELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNC  157 (250)
T ss_dssp             HHHHHHHTCCCC---TTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCEEC
T ss_pred             HHHHHHcCCChH---hhcCCcceEEEEEeeccccchhhhhHHHhhcCccccCcccchhhhcchhhhhHHHhccCCCCCcc
Confidence            999999999853   4778999999999999999888888877 778888899999999999999999999999999999


Q ss_pred             ccccchHHHHHHHHHHHHHHhcccceEe-eccCCCC
Q 024765          228 ISTACASSNYSILNATSHIIKGDTVSNS-PSSQADI  262 (263)
Q Consensus       228 v~tACsSsl~Al~~A~~~Lr~G~~d~~v-~Gae~~i  262 (263)
                      |++||+||+.||++|+++|++|+||++| +|++.++
T Consensus       158 v~~ACsS~l~Ai~~A~~~i~~G~~d~~lvGg~~~~~  193 (250)
T d1e5ma1         158 TVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAI  193 (250)
T ss_dssp             CCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCC
T ss_pred             ccccchhhhhhhHHHhhcccCCcccccccccchhhc
Confidence            9999999999999999999999999665 5567655

>d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=1e-39  Score=272.67  Aligned_cols=190  Identities=27%  Similarity=0.404  Sum_probs=167.6

Q ss_pred             CcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCC-CCCHHHHhhcCHHHHHHHHHH
Q 024765           70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG-WISPKIAKKADKYLIYALVAG  148 (263)
Q Consensus        70 ~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~-~i~~~~~~~~d~~~~l~l~aa  148 (263)
                      +||||||||+++|+|.++++||++|++|+++|+++++|+...+...++..++ ||... .+++++.+.+++.++|++.++
T Consensus         1 rRVvItG~G~v~p~G~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~aa   79 (216)
T d1tqya1           1 RRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQVAAEAD-FDPVAEGFGPRELDRMDRASQFAVACA   79 (216)
T ss_dssp             CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECCC-CCHHHHTCCHHHHHHSCHHHHHHHHHH
T ss_pred             CeEEEEeceeECCCCCCHHHHHHHHHcCCCEeecCCccCCCccccccccccc-ccccccccChhhhcccCcchhhHHHHH
Confidence            5899999999999999999999999999999999999988888777766655 55444 499999999999999999999


Q ss_pred             HHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHH-Hhc------cCCCCCcccccccchHHHHHHHHHhCC
Q 024765          149 KKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVS------YKKMSPFYIPYSLTNMASAVLAMDLGW  221 (263)
Q Consensus       149 ~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~-~~~------~~~~~~~~~~~~~~~~~a~~ia~~lgl  221 (263)
                      .|||+|||+.++   ++...|+|+++|++.++....++.+..+ ..+      .....++.++..+++.++++|+++||+
T Consensus        80 ~~Al~dAg~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~g~  156 (216)
T d1tqya1          80 REAFAASGLDPD---TLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGA  156 (216)
T ss_dssp             HHHHHHHTCCTT---TCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHHHHHHTC
T ss_pred             HHHHHHhcCCcc---ccccccccccccccccccchhhHHHhhhhhcccccccchhhcccccccccCchHHHHHHHHhcCc
Confidence            999999999854   4778999999999999999988888887 332      224556777888899999999999999


Q ss_pred             CCccccccccchHHHHHHHHHHHHHHhcccce-EeeccCCCCC
Q 024765          222 TGPSYSISTACASSNYSILNATSHIIKGDTVS-NSPSSQADIT  263 (263)
Q Consensus       222 ~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~-~v~Gae~~it  263 (263)
                      +||+++|++||+||+.||++|+++|++|+||+ +|+|+|++|+
T Consensus       157 ~Gp~~tv~~ACaS~~~Ai~~A~~~i~~G~~d~~ivGG~d~~l~  199 (216)
T d1tqya1         157 EGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPIT  199 (216)
T ss_dssp             CSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS
T ss_pred             cccceeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeccccC
Confidence            99999999999999999999999999999995 5778887764

>d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase I
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.3e-35  Score=253.07  Aligned_cols=189  Identities=31%  Similarity=0.436  Sum_probs=164.9

Q ss_pred             CCcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCCCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHH
Q 024765           69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (263)
Q Consensus        69 ~~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa  148 (263)
                      |+||||||||+++|+|.++++||++|++|+++|+++++|+...++....+.+. ++...++..++.+.+++..++.+.++
T Consensus         1 m~RVvITG~G~i~p~G~~~~~~w~~L~~G~sgi~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (253)
T d2vbaa1           1 MKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGLIDRKVVRFMSDASIYAFLSM   79 (253)
T ss_dssp             CCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECHHHHHTTCSCCEEECCC-CCCTTSSCHHHHTTCCHHHHHHHHHH
T ss_pred             CCcEEEEccEEECCCCCCHHHHHHHHHcCCCccccCCccccccCccccccccc-ccccccccchhhccchhhhhhhhHHH
Confidence            47899999999999999999999999999999999988877778888777775 44455578899999999999999999


Q ss_pred             HHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHH--HhccCCCCCcccccccchHHHHHHHHHhCCCCccc
Q 024765          149 KKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI--KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSY  226 (263)
Q Consensus       149 ~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~  226 (263)
                      .+|++++|+..+.  .....|+||++|+..++.......+..+  .++...++++.+.....+.++++|++.||++||++
T Consensus        80 ~~a~~~~~l~~~~--~~~~~r~g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g~~Gp~~  157 (253)
T d2vbaa1          80 EQAIADAGLSPEA--YQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNY  157 (253)
T ss_dssp             HHHHHHHTCCHHH--HTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTTTCCSCEE
T ss_pred             HHHHHHhhccchh--ccCCCCEEEEeccccccccccccccccccccCCccccCchhhhccccccccceeccccCccccee
Confidence            9999999997532  3457899999999999888776666655  45566788999999999999999999999999999


Q ss_pred             cccccchHHHHHHHHHHHHHHhcccceEee-ccCC
Q 024765          227 SISTACASSNYSILNATSHIIKGDTVSNSP-SSQA  260 (263)
Q Consensus       227 tv~tACsSsl~Al~~A~~~Lr~G~~d~~v~-Gae~  260 (263)
                      +|++||+||+.||++|+++|++|+||++|+ |+|.
T Consensus       158 ~i~taCaSsl~Ai~~A~~~i~~G~~d~alvgg~~~  192 (253)
T d2vbaa1         158 SISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEE  192 (253)
T ss_dssp             EEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC
T ss_pred             eeeccchhHHHHHHHHHHhcchhccceeeecchhh
Confidence            999999999999999999999999997755 5443

>d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]

Probab=99.97  E-value=9.1e-32  Score=230.42  Aligned_cols=191  Identities=34%  Similarity=0.524  Sum_probs=152.1

Q ss_pred             CcEEEEecceeCCcCCCHHHHHHHHHcCCCceeeCC--CCCCCCC------------CceeEEecCCCCCCCCCCHHH--
Q 024765           70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQ--GFDCSEF------------PTRIAAEIKSLSTGGWISPKI--  133 (263)
Q Consensus        70 ~~VaItG~g~~~p~g~~~~~~w~~L~~G~~~i~~~~--~~~~~~~------------~~~~~g~i~~fd~~~~i~~~~--  133 (263)
                      +||||||||+++|+|.++++||++|.+|+++|++++  +|+...+            +.+++++++.+.....+..+.  
T Consensus         1 rRVvITG~G~vsP~G~~~ee~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (270)
T d2ix4a1           1 RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVAAFVPYGSNPGEFDEALWL   80 (270)
T ss_dssp             CCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCGGGGCCTTSCHHHHHHHHHTCSCCEEECCCBSSSTTSBCHHHHS
T ss_pred             CeEEEECceeECCCcCCHHHHHHHHHcCCCeeccCChhhcccccccccccccccccccceeeeecccccCchhhhHHHhh
Confidence            579999999999999999999999999999999984  4544333            466778877543322233333  


Q ss_pred             -HhhcCHHHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHH
Q 024765          134 -AKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMA  211 (263)
Q Consensus       134 -~~~~d~~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  211 (263)
                       ...+++....++.+..+|++++++...  +.....+.++.++...+............ ........++.+++.+.+.+
T Consensus        81 ~~~~~~~~~~~a~~a~~~A~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (270)
T d2ix4a1          81 NSKAVANFIGYAVCAADEALRDAEWLPT--EEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMA  158 (270)
T ss_dssp             CSTTCCHHHHHHHHHHHHHHHHTTCCCC--SHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHH
T ss_pred             hhhhhhhhHHHHHHHHHHHHHHhhhccc--cccccccceEEeeccccccccchhhcchhhhccccccCcccCcccccchh
Confidence             345778888899999999999998642  23445677888877776666555555555 66677889999999999999


Q ss_pred             HHHHHHHhCCCCccccccccchHHHHHHHHHHHHHHhcccceEe-eccCCCC
Q 024765          212 SAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTVSNS-PSSQADI  262 (263)
Q Consensus       212 a~~ia~~lgl~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~v-~Gae~~i  262 (263)
                      +++|+++||++||+++|++||+||+.||++|+++|++|+||++| +|+|..+
T Consensus       159 a~~is~~~~l~Gp~~~v~~aCaSsl~Ai~~A~~~l~~G~~d~aivgg~~~~~  210 (270)
T d2ix4a1         159 SGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSI  210 (270)
T ss_dssp             HHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCC
T ss_pred             HHHHHHHhCCCCCCcccccccchhhHHHHHHHHHHHcCCCCeeccccchhhh
Confidence            99999999999999999999999999999999999999999664 5556654

>d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Biosynthetic thiolase
species: Zoogloea ramigera [TaxId: 350]

Probab=99.12  E-value=1e-10  Score=98.92  Aligned_cols=88  Identities=15%  Similarity=0.135  Sum_probs=69.3

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 024765          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (263)
Q Consensus       141 ~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  220 (263)
                      ..|+..+..++|+++|++++.++       .|++|+...                        .+ -...++..++...|
T Consensus        28 ~dL~~~~~~~~l~~~~i~~~~Id-------~vi~G~~~~------------------------~~-~~~n~ar~~al~ag   75 (268)
T d1m3ka1          28 HELGATVISAVLERAGVAAGEVN-------EVILGQVLP------------------------AG-EGQNPARQAAMKAG   75 (268)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSCC------------------------TT-SCSCHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCc-------EEEEeeccc------------------------cC-cchHHHhHHHHHhC
Confidence            35788899999999999976655       589997631                        01 12356777888888


Q ss_pred             CC--CccccccccchHHHHHHHHHHHHHHhcccceEe-eccCC
Q 024765          221 WT--GPSYSISTACASSNYSILNATSHIIKGDTVSNS-PSSQA  260 (263)
Q Consensus       221 l~--Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~v-~Gae~  260 (263)
                      +.  =|+++|+..|+||+.||++|+++|+.|++|++| +|.|.
T Consensus        76 lp~~vpa~tv~~~C~Sg~~Ai~~Aa~~I~~G~~dvvlagG~Es  118 (268)
T d1m3ka1          76 VPQEATAWGMNQLAGSGLRAVALGMQQIATGDASIIVAGGMES  118 (268)
T ss_dssp             CCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEE
T ss_pred             CcccccceeecccCcccchHHHHHHHHHhCCCceEEeeccccc
Confidence            85  378999999999999999999999999999765 55553

>d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoadipyl CoA thiolase
species: Thermus thermophilus [TaxId: 274]

Probab=99.04  E-value=3.5e-10  Score=95.78  Aligned_cols=88  Identities=13%  Similarity=0.097  Sum_probs=68.6

Q ss_pred             HHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCC
Q 024765          142 IYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGW  221 (263)
Q Consensus       142 ~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl  221 (263)
                      .|+..++.++|+++|++++.++       .|++|+....                        +.....++..++...|+
T Consensus        26 dL~~~a~~~al~~~~i~~~~Id-------~vi~G~v~~~------------------------g~~~~n~aR~~al~aGl   74 (273)
T d1ulqa1          26 DLLAHALSVLVDRSGVPKEEVE-------DVYAGCANQA------------------------GEDNRNVARMALLLAGF   74 (273)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGCC-------EEEEECSCCS------------------------STTTTTHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHcCCCHHHCC-------EEEEEecccc------------------------ccccccHHHHHHHHcCC
Confidence            4678899999999999976644       6899976321                        11123467777777788


Q ss_pred             CC--ccccccccchHHHHHHHHHHHHHHhcccceEe-eccCC
Q 024765          222 TG--PSYSISTACASSNYSILNATSHIIKGDTVSNS-PSSQA  260 (263)
Q Consensus       222 ~G--p~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~v-~Gae~  260 (263)
                      -.  |+++|+.+|+||+.||++|++.|+.|+.|++| +|+|.
T Consensus        75 p~~vp~~tVn~~CaSg~~Ai~~a~~~I~~G~~d~~lagG~Es  116 (273)
T d1ulqa1          75 PVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVES  116 (273)
T ss_dssp             CTTCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEE
T ss_pred             CCccceEEEecccchHHHHHHHHHHHHhcCCCccceeeeccc
Confidence            43  89999999999999999999999999999764 55553

>d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase)
species: Pseudomonas fragi [TaxId: 296]

Probab=99.02  E-value=3.2e-10  Score=95.41  Aligned_cols=88  Identities=15%  Similarity=0.073  Sum_probs=65.2

Q ss_pred             HHHHHHHHHHHHH-HcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 024765          141 LIYALVAGKKALV-DAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (263)
Q Consensus       141 ~~l~l~aa~~Al~-dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l  219 (263)
                      ..|+..+..++|+ ++|++++.++       .|++|......                        .....++..++...
T Consensus        31 ~dL~~~~i~~~l~r~agi~~~~Id-------~vi~G~v~~~~------------------------~~g~n~aR~~al~a   79 (262)
T d1wdkc1          31 EDMSAHLISKVLERNSKVDPGEVE-------DVIWGCVNQTL------------------------EQGWNIARMASLMT   79 (262)
T ss_dssp             HHHHHHHHHHHHHHCTTSCGGGEE-------EEEEECSSBSB------------------------TTTTTHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHhcCCCCHHHee-------EEEEEeecccc------------------------cccccchhhhHhhh
Confidence            3577888999998 5999876544       58888764211                        11123455666666


Q ss_pred             CCCC--ccccccccchHHHHHHHHHHHHHHhcccceEe-eccC
Q 024765          220 GWTG--PSYSISTACASSNYSILNATSHIIKGDTVSNS-PSSQ  259 (263)
Q Consensus       220 gl~G--p~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~v-~Gae  259 (263)
                      |+..  |+++|+.+|+||+.||++|++.|+.|+.|++| +|.|
T Consensus        80 g~p~~vp~~tV~~~C~Sgl~Ai~~aa~~I~sG~~dvvlAgGvE  122 (262)
T d1wdkc1          80 QIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVE  122 (262)
T ss_dssp             SSCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEE
T ss_pred             hcccccchhhccccccHHHHHHHHHHHHHHhhcCCceeeeccc
Confidence            6643  88999999999999999999999999999765 5555

>d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Thiolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.88  E-value=3.8e-09  Score=88.97  Aligned_cols=87  Identities=9%  Similarity=0.049  Sum_probs=63.7

Q ss_pred             HHHHHHHHHHHH----HcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHH
Q 024765          142 IYALVAGKKALV----DAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAM  217 (263)
Q Consensus       142 ~l~l~aa~~Al~----dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~  217 (263)
                      .|+..+..++|+    ++|++++.++       .|++|+...                        .+ ....++..++.
T Consensus        37 ~L~~~~i~~~l~r~~~~~~idp~~Id-------~vi~G~v~~------------------------~g-~~~~~aR~~al   84 (269)
T d1afwa1          37 YLLYNFLNEFIGRFPEPLRADLNLIE-------EVACGNVLN------------------------VG-AGATEHRAACL   84 (269)
T ss_dssp             HHHHHHHHHHHHTSCHHHHTCGGGCC-------CEEEECSSS------------------------BG-GGHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCccccCChhhcC-------EEEeccccc------------------------cc-cccccchhhhh
Confidence            355667777776    5568766544       588887531                        11 12345667777


Q ss_pred             HhCC--CCccccccccchHHHHHHHHHHHHHHhcccceEe-eccCC
Q 024765          218 DLGW--TGPSYSISTACASSNYSILNATSHIIKGDTVSNS-PSSQA  260 (263)
Q Consensus       218 ~lgl--~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d~~v-~Gae~  260 (263)
                      .-|+  .-|+++|+.+|+||+.||+.|++.|+.|+.|++| +|.|+
T Consensus        85 ~aglp~~vpa~tVnr~CaSg~~Ai~~Aa~~I~~G~~divlagG~Es  130 (269)
T d1afwa1          85 ASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVES  130 (269)
T ss_dssp             HTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEE
T ss_pred             hccccccccchhccccchHHHHHHHHHHHHHhhccccceeeeeccc
Confidence            7776  5699999999999999999999999999999765 55553

>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Polyketide synthase PKS18
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.69  E-value=5.4e-08  Score=85.37  Aligned_cols=157  Identities=15%  Similarity=0.141  Sum_probs=92.5

Q ss_pred             CcEEEEecceeCCcC-CCHHHHHHHHHcCCCceee---CCC-CCCCCCCceeEEecCCCCCCC----CCCH----HHHhh
Q 024765           70 RRIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISD---IQG-FDCSEFPTRIAAEIKSLSTGG----WISP----KIAKK  136 (263)
Q Consensus        70 ~~VaItG~g~~~p~g-~~~~~~w~~L~~G~~~i~~---~~~-~~~~~~~~~~~g~i~~fd~~~----~i~~----~~~~~  136 (263)
                      ...+|+|+|...|.- .+-+++++.+..-......   +.+ +...+...+.- .+++.|...    ..++    +....
T Consensus        10 ~~a~I~g~g~~~P~~~v~n~e~~~~~~~~~~~~~~~~~~~ri~~~tGI~~R~~-~~~~~~~~~~~~~~~~~~~~~r~~~~   88 (372)
T d1teda_          10 TVAVIEGLATGTPRRVVNQSDAADRVAELFLDPGQRERIPRVYQKSRITTRRM-AVDPLDAKFDVFRREPATIRDRMHLF   88 (372)
T ss_dssp             CEEEEEEEEEECCSCEEEHHHHHHHHHTC----CCTTHHHHHHHTSCCSEEEC-SSCTTSTTHHHHTTCSSCHHHHHHHH
T ss_pred             ceEEEEEEEEeCCCeEEcHHHHHHHHHhhcCChHHHHHHHHHHHccCCcccce-eccccccchhhhhhcCCCHHHHHHHH
Confidence            456799999999976 6778888887532110000   000 00112222210 011111110    0111    11111


Q ss_pred             cCHHHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHH
Q 024765          137 ADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLA  216 (263)
Q Consensus       137 ~d~~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia  216 (263)
                      ......|+.+|+.+||++||++++        ++.++|-.+..+                         ......+..|+
T Consensus        89 ~e~~~~la~~Aa~~aL~~ag~~~~--------dId~lI~~t~t~-------------------------~~~P~~a~~v~  135 (372)
T d1teda_          89 YEHAVPLAVDVSKRALAGLPYRAA--------EIGLLVLATSTG-------------------------FIAPGVDVAIV  135 (372)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCGG--------GEEEEEEEESSC-------------------------CCSSCHHHHHH
T ss_pred             HhHHHHHHHHHHHHHHHHcCCCHH--------HCCEEEEeccCC-------------------------CCCchHHHHHH
Confidence            233457999999999999999864        444454332211                         11124578999


Q ss_pred             HHhCCCCcc--cccc-ccchHHHHHHHHHHHHHHhcccc-eEeeccCC
Q 024765          217 MDLGWTGPS--YSIS-TACASSNYSILNATSHIIKGDTV-SNSPSSQA  260 (263)
Q Consensus       217 ~~lgl~Gp~--~tv~-tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~  260 (263)
                      ..||++...  +.+. .||++++.||..|..+|++|... ++|+++|.
T Consensus       136 ~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~l~sg~~~~~LVV~~E~  183 (372)
T d1teda_         136 KELGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIEL  183 (372)
T ss_dssp             HHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEE
T ss_pred             hhhccCCceeEeeccccCccHHHHHHHHHHHHHhcCCCccceeeeehh
Confidence            999998653  3343 58999999999999999999985 77888773

>d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway
species: Streptomyces sp. r1128 [TaxId: 140437]

Probab=98.65  E-value=7.4e-08  Score=76.18  Aligned_cols=88  Identities=19%  Similarity=0.277  Sum_probs=68.7

Q ss_pred             HHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 024765          140 YLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (263)
Q Consensus       140 ~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l  219 (263)
                      ...|+.+++.+||+++|+.++.++       .|++++..+                         .......+..|...+
T Consensus        58 ~~~ma~~Aa~~aL~~a~~~~~dId-------~li~~s~~~-------------------------~~~~p~~a~~v~~~l  105 (181)
T d1mzja1          58 IQVMGVAASRRALEHAGVDPAEID-------LVVVSTMTN-------------------------FVHTPPLSVAIAHEL  105 (181)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSCC-------------------------CCCSSCHHHHHHHHH
T ss_pred             HHHHhHHHHHhhhhhccCChhHCe-------EEEEeccCC-------------------------ccccccHHHHHHHhh
Confidence            356899999999999999865432       456655431                         112234577889999


Q ss_pred             CCC-CccccccccchHHHHHHHHHHHHHHhcccc-eEeeccC
Q 024765          220 GWT-GPSYSISTACASSNYSILNATSHIIKGDTV-SNSPSSQ  259 (263)
Q Consensus       220 gl~-Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae  259 (263)
                      +.. -+++.|+.+|+++++||..|..+|++|... ++|+++|
T Consensus       106 ~~~~~~~~Dv~~~C~g~~~aL~~A~~~i~~~~~~~~LvV~~e  147 (181)
T d1mzja1         106 GADNAGGFDLSAACAGFCHALSIAADAVESGGSRHVLVVATE  147 (181)
T ss_dssp             TCTTCEEEEEECGGGHHHHHHHHHHHHHHHSSCSCEEEEEEE
T ss_pred             cCCCccceeHHhhhccHHHHHHHHhCHhhcCCCceeEEeeec
Confidence            985 488999999999999999999999999984 7788776

>d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Escherichia coli [TaxId: 562]

Probab=98.64  E-value=6.8e-08  Score=75.93  Aligned_cols=88  Identities=20%  Similarity=0.311  Sum_probs=70.0

Q ss_pred             HHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 024765          140 YLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (263)
Q Consensus       140 ~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l  219 (263)
                      ...|+.+++.+||+++|+.++.++       .|++++..+                         .......+..|...|
T Consensus        51 ~~~la~~Aa~~al~~a~~~~~~Id-------~li~~s~~~-------------------------~~~~P~~a~~v~~~L   98 (174)
T d1hnja1          51 VSTMGFEAATRAIEMAGIEKDQIG-------LIVVATTSA-------------------------THAFPSAACQIQSML   98 (174)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSCC-------------------------SCSSSCHHHHHHHHH
T ss_pred             chHHHHHHHHHhhhhccccccccc-------EEEEecCCc-------------------------cccccchhhhhhhcc
Confidence            356899999999999999865433       456666531                         112235578899999


Q ss_pred             CCCC-ccccccccchHHHHHHHHHHHHHHhcccc-eEeeccC
Q 024765          220 GWTG-PSYSISTACASSNYSILNATSHIIKGDTV-SNSPSSQ  259 (263)
Q Consensus       220 gl~G-p~~tv~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae  259 (263)
                      |++. +++.|+.+|+++++||+.|..+|++|..+ ++|+++|
T Consensus        99 gl~~~~~~di~~~C~g~~~al~~A~~~i~sg~~~~~Lvv~~e  140 (174)
T d1hnja1          99 GIKGCPAFDVAAACAGFTYALSVADQYVKSGAVKYALVVGSD  140 (174)
T ss_dssp             TCCSSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEE
T ss_pred             CCCchhhhhhhhhhccHHHHHHHHHHHHhcCCcceeEEEeee
Confidence            9985 78999999999999999999999999996 7778776

>d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Thermus thermophilus [TaxId: 274]

Probab=98.60  E-value=6.2e-08  Score=76.02  Aligned_cols=87  Identities=15%  Similarity=0.160  Sum_probs=68.1

Q ss_pred             HHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEE-eecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHH
Q 024765          140 YLIYALVAGKKALVDAGITEQVSGELDKSRCGVII-GSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMD  218 (263)
Q Consensus       140 ~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~v-G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~  218 (263)
                      ...|+.+++.+||+++|++++        ++.+++ ++..                         +.......+..|+..
T Consensus        49 ~~~ma~~Aa~~aL~~agi~~~--------dIdlli~~s~t-------------------------~~~~~p~~a~~v~~~   95 (172)
T d1ub7a1          49 TSDLAFKAVEDLLRRHPGALE--------GVDAVIVATNT-------------------------PDALFPDTAALVQAR   95 (172)
T ss_dssp             HHHHHHHHHHHHHHHSTTTTT--------TEEEEEEECSS-------------------------CSEEESCHHHHHHHH
T ss_pred             ccHHHHHHHHHHHhhcCcccc--------cceEEEEeccc-------------------------ccccccchHHHHHHH
Confidence            357889999999999999853        444444 4332                         112234557789999


Q ss_pred             hCCCCccccccccchHHHHHHHHHHHHHHhcccc-eEeeccC
Q 024765          219 LGWTGPSYSISTACASSNYSILNATSHIIKGDTV-SNSPSSQ  259 (263)
Q Consensus       219 lgl~Gp~~tv~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae  259 (263)
                      ||.+.+++.|..+|++.++||++|..+|++|... ++|+++|
T Consensus        96 Lg~~~~~~di~~~C~g~~~al~~a~~~~~~~~~~~~Lvv~~e  137 (172)
T d1ub7a1          96 FGLKAFAYDLLAGCPGWIYALAQAHALVEAGLAQKVLAVGAE  137 (172)
T ss_dssp             TTCCCEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEE
T ss_pred             hccCccceeehhccccHHHHHHHHhhhhhcCCcceeEEeccc
Confidence            9999999999999999999999999999999885 6677666

>d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Putative polyketide synthase SCO1206
species: Streptomyces coelicolor [TaxId: 1902]

Probab=98.37  E-value=7.3e-07  Score=71.41  Aligned_cols=88  Identities=18%  Similarity=0.152  Sum_probs=66.2

Q ss_pred             HHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 024765          140 YLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (263)
Q Consensus       140 ~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l  219 (263)
                      ...|+..++.+||+++|++++.++       .|+++++.+                     +    ..+ ..+..|...+
T Consensus        75 a~~la~~Aa~~aL~~ag~~~~dId-------~lI~~s~t~---------------------~----~~P-~~aa~v~~~l  121 (200)
T d1u0ma1          75 AKSRVPAVIQRALDDAELLATDID-------VIIYVSCTG---------------------F----MMP-SLTAWLINEM  121 (200)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGCS-------EEEEECSSS---------------------C----CSS-CHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHcCCChhhhh-------eEEEeccCC---------------------C----Ccc-hhHHHHHHHH
Confidence            456999999999999999965433       344444321                     1    122 3577899999


Q ss_pred             CCCCc--cccc-cccchHHHHHHHHHHHHHHhcccc-eEeeccCC
Q 024765          220 GWTGP--SYSI-STACASSNYSILNATSHIIKGDTV-SNSPSSQA  260 (263)
Q Consensus       220 gl~Gp--~~tv-~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~  260 (263)
                      ++...  .+.+ ..+|++++++|+.|..+|+.|... ++|+++|.
T Consensus       122 g~~~~~~~~~i~~~gC~g~~~al~~A~~~l~~~~~~~vLvv~~e~  166 (200)
T d1u0ma1         122 GFDSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEF  166 (200)
T ss_dssp             TCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEE
T ss_pred             hcCCCeeEeccccchhhHHHHHHHHHHHHHHhCCCCEEEEEEEec
Confidence            99874  4455 579999999999999999999885 77888873

>d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Chalcone synthase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=98.08  E-value=8.6e-06  Score=66.59  Aligned_cols=88  Identities=15%  Similarity=0.085  Sum_probs=63.7

Q ss_pred             HHHHHHHHHHHHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 024765          140 YLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (263)
Q Consensus       140 ~~~l~l~aa~~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l  219 (263)
                      ...|+..++.+||++||++++.++       .|+++++.+                         ...+.. +..+-..+
T Consensus       102 ~~~la~~Aa~~aL~~a~~~~~dId-------~lI~~t~t~-------------------------~~~p~~-~a~~~~~l  148 (235)
T d1bi5a1         102 VPRLGKEAAVKAIKEWGQPKSKIT-------HLIVCTTSG-------------------------VDMPGA-DYQLTKLL  148 (235)
T ss_dssp             HHHHHHHHHHHHHHHHCSCGGGCC-------EEEEEESSC-------------------------CCSSCH-HHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCChhHCc-------EEEEecccC-------------------------CccCcc-HHHHHHHH
Confidence            457999999999999999965433       456655531                         112223 44566677


Q ss_pred             CCCCcc--c-cccccchHHHHHHHHHHHHHHhcccc-eEeeccCC
Q 024765          220 GWTGPS--Y-SISTACASSNYSILNATSHIIKGDTV-SNSPSSQA  260 (263)
Q Consensus       220 gl~Gp~--~-tv~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae~  260 (263)
                      ++....  + .+..+|++++++|..|..+|+.|... ++|+++|.
T Consensus       149 ~~~~~~~~~~~~~~~C~g~~~al~~A~~~i~~~~~~~vLvV~~E~  193 (235)
T d1bi5a1         149 GLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEV  193 (235)
T ss_dssp             TCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEEC
T ss_pred             hcCCCceEEeeecCccchHHHHHHHHHHHHHcCCCCeEEEEEeee
Confidence            766543  3 45778999999999999999999985 77888873

>d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS
species: Staphylococcus aureus [TaxId: 1280]

Probab=97.85  E-value=8.5e-06  Score=62.95  Aligned_cols=132  Identities=14%  Similarity=0.132  Sum_probs=83.6

Q ss_pred             EEEEecceeCCcC-CCHHHHHHHHHcCCCceeeC-CCCCCCCCCceeEEecCCCCCCCCCCHHHHhhcCHHHHHHHHHHH
Q 024765           72 IVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDI-QGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGK  149 (263)
Q Consensus        72 VaItG~g~~~p~g-~~~~~~w~~L~~G~~~i~~~-~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~~l~l~aa~  149 (263)
                      |-|.|+|..+|.- .+.+++-+.+  |.+. ..+ ++   -+...+.   +        ..+.|    + ...|++.++.
T Consensus         2 VgI~~~~~ylP~~~v~~~e~~~~~--g~~~-~~i~~~---~Gi~~r~---~--------~~~~E----~-~~~ma~~Aa~   59 (166)
T d1xpma1           2 IGIDKINFYVPKYYVDMAKLAEAR--QVDP-NKFLIG---IGQTEMA---V--------SPVNQ----D-IVSMGANAAK   59 (166)
T ss_dssp             EEEEEEEEECCSEEEEHHHHHHHT--TSCH-HHHHTT---TCCSEEE---E--------CCTTC----C-HHHHHHHHHH
T ss_pred             eeEeEEEEECCCeEEcHHHHHHHh--CCCH-HHHHHh---cCcEEEE---e--------CCCcc----C-HHHHHHHHHH
Confidence            7899999999987 5777765543  2211 000 11   0111111   1        11111    1 2347788888


Q ss_pred             HHHHHcCCCCcccCcCCCCceEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCCC--cccc
Q 024765          150 KALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTG--PSYS  227 (263)
Q Consensus       150 ~Al~dAGl~~~~~~~~~~~r~gv~vG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G--p~~t  227 (263)
                      ++|++.+          .+++++++-.+..                        +.......+..+...+|++.  .++.
T Consensus        60 ~al~~~~----------~~~id~li~~t~~------------------------~~~~~p~~a~~v~~~lg~~~~~~~~d  105 (166)
T d1xpma1          60 DIITDED----------KKKIGMVIVATES------------------------AVDAAKAAAVQIHNLLGIQPFARCFE  105 (166)
T ss_dssp             TTCCHHH----------HHHEEEEEEECSS------------------------CSBSSSCHHHHHHHHTTCCSSCEEEE
T ss_pred             hhhcccc----------CCCCCeEEEeccc------------------------cccccchhHHHHHHhhccccceEEee
Confidence            8776543          2356655544321                        11223456788999999975  6799


Q ss_pred             ccccchHHHHHHHHHHHHHHhcccc-eEeeccC
Q 024765          228 ISTACASSNYSILNATSHIIKGDTV-SNSPSSQ  259 (263)
Q Consensus       228 v~tACsSsl~Al~~A~~~Lr~G~~d-~~v~Gae  259 (263)
                      +..+|+++++||..|..+|++|... ++|+++|
T Consensus       106 v~~~C~g~~~al~~A~~~i~~~~~~~alvV~sd  138 (166)
T d1xpma1         106 MKEACYAATPAIQLAKDYLATRPNEKVLVIATD  138 (166)
T ss_dssp             EESTTTTHHHHHHHHHHHHTTCTTCEEEEEEEE
T ss_pred             ecccHHHHHHHHHHHhhHHhcCCCCeEEEEEEc
Confidence            9999999999999999999999985 7788776