Citrus Sinensis ID: 024779

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260--
Protein Sequence
MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDFLKELE
Secondary Structure (PSIPRED)
ccEEEEEEccHHHHHHHHHHccccEEEEEEEcccccEEEEEEEccccccccEEEEEEccccccccccccEEEEEEEEccHHHHHHHHHHcccEEEEccccccccccEEEEEEcccccEEEEEEccccccccccEEEEcccHHHHHHHHHHccccEEEEEEccccccEEEEEEEccccccccEEEEEEcccccccccccccEEEEEEcccHHHHHHHHHHcccEEEccccccccccEEEEEEEcccccEEEEEEccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEEEccHHHHHHHHHHHHccEEEEcccccccccEEEEEEcccccccEEEEEEEcccccccccccccEEEEEEcHHHHHHHHHHHHcccEEEEcccccccccEEEEEEEcccccEEEEEEcccccccccEEEEEEccHHHHHHHHHHHHccEEEEEcccccccEEEEEEEcccccccEEEEEEEccccEEccccccEEEEEEEcccHHHHHHHHHHHcccEEcccccccccccEEEEEEcccccEEEEEccHHHHHHcc
Coil and Loop (DISEMBL)
MLHVVYRVGDLDRTIKFYTECLGMkllrkrdipeekytnaflgygpedsHFVIELTynygvdkydigtgfghfgiavDDVAKTVELIKAkggkvtrepgpvkggntviafiedpdgykfellergptpeplcQVMLRVGDLDRSINFYEQAFGMELlrkrdnpeyKYTIAMMGYGPEDKNVVLELTynygvtdydkgnayaqiAIGTDDVYKTAEAIKLFggkvtrepgplpgintkitacldpdgwktvFVDNVDFLKELE
Flexible Loop (DISEMBL)
mlhvvyrvgdldrtikFYTEClgmkllrkrdipeEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKakggkvtrepgpvkggntvIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRSINFYEQAfgmellrkrDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFggkvtrepgplpGINTKItacldpdgwkTVFVDNVDFLKELE
Low Complexity Region (SEG)
MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDFLKELE
Disordered region (IsUnstruct)
**HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDFL****
Disordered Region (DISOPRED)
MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDF*****
Disordered Region (DISEMBL)
MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDFLKELE
Disordered Region (DISPRO)
MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDFL*EL*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDFLKELE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	262	2.2.26 [Sep-21-2011]
Q8W593	350	Probable lactoylglutathio	yes	no	1.0	0.748	0.938	1e-145
Q948T6	291	Lactoylglutathione lyase	no	no	1.0	0.900	0.752	1e-117
Q39366	282	Putative lactoylglutathio	N/A	no	0.996	0.925	0.736	1e-115
P0AC83	135	Lactoylglutathione lyase	yes	no	0.469	0.911	0.634	5e-41
P0AC81	135	Lactoylglutathione lyase	N/A	no	0.469	0.911	0.634	5e-41
P0AC82	135	Lactoylglutathione lyase	N/A	no	0.469	0.911	0.634	5e-41
P0A1Q2	135	Lactoylglutathione lyase	yes	no	0.469	0.911	0.609	2e-40
P0A1Q3	135	Lactoylglutathione lyase	N/A	no	0.469	0.911	0.609	2e-40
P44638	135	Lactoylglutathione lyase	yes	no	0.5	0.970	0.610	4e-40
Q55595	131	Probable lactoylglutathio	N/A	no	0.469	0.938	0.585	1e-38

>sp|Q8W593|LGUC_ARATH Probable lactoylglutathione lyase, chloroplast OS=Arabidopsis thaliana GN=At1g67280 PE=2 SV=1

 Score =  512 bits (1319), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 246/262 (93%), Positives = 256/262 (97%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
           MLHVVYRVGD+DRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG
Sbjct: 89  MLHVVYRVGDMDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 148

Query: 61  VDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 120
           VDKYDIG GFGHFGIAVDDVAKTVEL+KAKGGKV+REPGPVKGG TVIAFIEDPDGYKFE
Sbjct: 149 VDKYDIGAGFGHFGIAVDDVAKTVELVKAKGGKVSREPGPVKGGKTVIAFIEDPDGYKFE 208

Query: 121 LLERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKN 180
           LLERGPTPEPLCQVMLRVGDLDR+I FYE+AFGMELLR RDNPEYKYTIAMMGYGPEDK 
Sbjct: 209 LLERGPTPEPLCQVMLRVGDLDRAIKFYEKAFGMELLRTRDNPEYKYTIAMMGYGPEDKF 268

Query: 181 VVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITA 240
            VLELTYNYGVT+YDKGNAYAQIAIGTDDVYKTAEAIKLFGGK+TREPGPLPGI+TKITA
Sbjct: 269 PVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKITREPGPLPGISTKITA 328

Query: 241 CLDPDGWKTVFVDNVDFLKELE 262
           CLDPDGWK+VFVDN+DFLKELE
Sbjct: 329 CLDPDGWKSVFVDNIDFLKELE 350

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
Arabidopsis thaliana (taxid: 3702)
EC: 4EC: .EC: 4EC: .EC: 1EC: .EC: 5

>sp|Q948T6|LGUL_ORYSJ Lactoylglutathione lyase OS=Oryza sativa subsp. japonica GN=GLX-I PE=1 SV=2

 Score =  422 bits (1085), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 201/267 (75%), Positives = 231/267 (86%), Gaps = 5/267 (1%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
           +LH VYRVGDLDRTIK YTEC GMKLLRKRD+PEEKYTNAFLG+GPED++F +ELTYNYG
Sbjct: 25  LLHAVYRVGDLDRTIKCYTECFGMKLLRKRDVPEEKYTNAFLGFGPEDTNFALELTYNYG 84

Query: 61  VDKYDIGTGFGHFGIAVDDVAKTVELIKAKGG-KVTREPGPVKGGNTVIAFIEDPDGYKF 119
           VDKYDIG GFGHF IA +DV K  E IK+    K+TREPGPVKGG+TVIAF +DPDGY F
Sbjct: 85  VDKYDIGAGFGHFAIATEDVYKLAEKIKSSCCCKITREPGPVKGGSTVIAFAQDPDGYMF 144

Query: 120 ELLERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDK 179
           EL++RGPTPEPLCQVMLRVGDLDRSI FYE+A GM+LLRK+D P+YKYTIAM+GY  EDK
Sbjct: 145 ELIQRGPTPEPLCQVMLRVGDLDRSIKFYEKALGMKLLRKKDVPDYKYTIAMLGYADEDK 204

Query: 180 NVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKL----FGGKVTREPGPLPGIN 235
             V+ELTYNYGVT+Y KGNAYAQ+AIGT+DVYK+AEA++L     GGK+ R+PGPLPG+N
Sbjct: 205 TTVIELTYNYGVTEYTKGNAYAQVAIGTEDVYKSAEAVELVTKELGGKILRQPGPLPGLN 264

Query: 236 TKITACLDPDGWKTVFVDNVDFLKELE 262
           TKI + LDPDGWK V VDN DFLKEL+
Sbjct: 265 TKIASFLDPDGWKVVLVDNADFLKELQ 291

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q39366|LGUL_BRAOG Putative lactoylglutathione lyase OS=Brassica oleracea var. gemmifera PE=2 SV=1

 Score =  413 bits (1062), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 196/266 (73%), Positives = 227/266 (85%), Gaps = 5/266 (1%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
            LHVVYRVGDLDRTI+FYTEC GMK+LRKRD+PEEKY+NAFLG+GPE S+FV+ELTYNYG
Sbjct: 18  FLHVVYRVGDLDRTIQFYTECFGMKVLRKRDVPEEKYSNAFLGFGPETSNFVVELTYNYG 77

Query: 61  VDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 120
           V  YDIGTGFGHF I+  DV+K VE ++AKGG VTREPGPVKGG +VIAF++DPDGY FE
Sbjct: 78  VSSYDIGTGFGHFAISTQDVSKMVEAVRAKGGNVTREPGPVKGGGSVIAFVKDPDGYTFE 137

Query: 121 LLERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKN 180
           L++RGPTPEPLCQVMLRVGDLDR++ F E+A GM LLR+ + PEY  TI MMGY  E ++
Sbjct: 138 LIQRGPTPEPLCQVMLRVGDLDRAVKFMEKALGMRLLRRIERPEYN-TIGMMGYAEEYES 196

Query: 181 VVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKL----FGGKVTREPGPLPGINT 236
           +VLELTYNYGVT+Y KGNAYAQIAIGTDDVYK+AE +K+     GGK+TRE GPLPG+ T
Sbjct: 197 IVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKSAEVVKIVNQELGGKITREAGPLPGLGT 256

Query: 237 KITACLDPDGWKTVFVDNVDFLKELE 262
           KI + LDPDGWK V VDN DFLKELE
Sbjct: 257 KIVSFLDPDGWKQVLVDNEDFLKELE 282

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Brassica oleracea var. gemmifera (taxid: 178616)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC83|LGUL_SHIFL Lactoylglutathione lyase OS=Shigella flexneri GN=gloA PE=3 SV=1

 Score =  167 bits (424), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 78/123 (63%), Positives = 96/123 (78%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
           +LH + RVGDL R+I FYT+ LGMKLLR  + PE KY+ AF+GYGPE    VIELTYN+G
Sbjct: 3   LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWG 62

Query: 61  VDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 120
           VDKY++GT +GH  ++VD+ A+  E I+  GG VTRE GPVKGG TVIAF+EDPDGYK E
Sbjct: 63  VDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIE 122

Query: 121 LLE 123
           L+E
Sbjct: 123 LIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Shigella flexneri (taxid: 623)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC81|LGUL_ECOLI Lactoylglutathione lyase OS=Escherichia coli (strain K12) GN=gloA PE=1 SV=1

 Score =  167 bits (424), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 78/123 (63%), Positives = 96/123 (78%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
           +LH + RVGDL R+I FYT+ LGMKLLR  + PE KY+ AF+GYGPE    VIELTYN+G
Sbjct: 3   LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWG 62

Query: 61  VDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 120
           VDKY++GT +GH  ++VD+ A+  E I+  GG VTRE GPVKGG TVIAF+EDPDGYK E
Sbjct: 63  VDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIE 122

Query: 121 LLE 123
           L+E
Sbjct: 123 LIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Escherichia coli (strain K12) (taxid: 83333)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC82|LGUL_ECO57 Lactoylglutathione lyase OS=Escherichia coli O157:H7 GN=gloA PE=3 SV=1

 Score =  167 bits (424), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 78/123 (63%), Positives = 96/123 (78%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
           +LH + RVGDL R+I FYT+ LGMKLLR  + PE KY+ AF+GYGPE    VIELTYN+G
Sbjct: 3   LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWG 62

Query: 61  VDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 120
           VDKY++GT +GH  ++VD+ A+  E I+  GG VTRE GPVKGG TVIAF+EDPDGYK E
Sbjct: 63  VDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIE 122

Query: 121 LLE 123
           L+E
Sbjct: 123 LIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Escherichia coli O157:H7 (taxid: 83334)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0A1Q2|LGUL_SALTY Lactoylglutathione lyase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=gloA PE=3 SV=1

 Score =  165 bits (418), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 75/123 (60%), Positives = 94/123 (76%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
           +LH + RVGDL R+I FYT  LGMKLLR  + PE KY+ AF+GYGPE    VIELTYN+G
Sbjct: 3   LLHTMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWG 62

Query: 61  VDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 120
           V+ YD+G  +GH  ++VD+ A+  E I+  GG VTRE GPVKGG+T+IAF+EDPDGYK E
Sbjct: 63  VESYDMGNAYGHIALSVDNAAEACERIRQNGGNVTREAGPVKGGSTIIAFVEDPDGYKIE 122

Query: 121 LLE 123
           L+E
Sbjct: 123 LIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0A1Q3|LGUL_SALTI Lactoylglutathione lyase OS=Salmonella typhi GN=gloA PE=3 SV=1

 Score =  165 bits (418), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 75/123 (60%), Positives = 94/123 (76%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
           +LH + RVGDL R+I FYT  LGMKLLR  + PE KY+ AF+GYGPE    VIELTYN+G
Sbjct: 3   LLHTMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWG 62

Query: 61  VDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 120
           V+ YD+G  +GH  ++VD+ A+  E I+  GG VTRE GPVKGG+T+IAF+EDPDGYK E
Sbjct: 63  VESYDMGNAYGHIALSVDNAAEACERIRQNGGNVTREAGPVKGGSTIIAFVEDPDGYKIE 122

Query: 121 LLE 123
           L+E
Sbjct: 123 LIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Salmonella typhi (taxid: 90370)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P44638|LGUL_HAEIN Lactoylglutathione lyase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=gloA PE=1 SV=1

 Score =  165 bits (417), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 80/131 (61%), Positives = 96/131 (73%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
           +LH + RVGDLDR+IKFY + LGM+LLR  + PE KYT AFLGY   +S   IELTYN+G
Sbjct: 3   ILHTMLRVGDLDRSIKFYQDVLGMRLLRTSENPEYKYTLAFLGYEDGESAAEIELTYNWG 62

Query: 61  VDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 120
           VDKY+ GT +GH  I VDD+  T E ++A GG VTRE GPVKGG+TVIAF+EDPDGYK E
Sbjct: 63  VDKYEHGTAYGHIAIGVDDIYATCEAVRASGGNVTREAGPVKGGSTVIAFVEDPDGYKIE 122

Query: 121 LLERGPTPEPL 131
            +E   T   L
Sbjct: 123 FIENKSTKSGL 133

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q55595|LGUL_SYNY3 Probable lactoylglutathione lyase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=gloA PE=3 SV=1

 Score =  159 bits (403), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 72/123 (58%), Positives = 96/123 (78%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
           +LH + RVGDLD++++FY + LGM LLRK+D P  ++T AF+GYG E  + VIELT+N+G
Sbjct: 3   LLHTMIRVGDLDKSLQFYCDILGMNLLRKKDYPSGEFTLAFVGYGKESENAVIELTHNWG 62

Query: 61  VDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 120
            DKYD+G GFGH  + V+D+  T + I+ KGGKV REPGP+K G TVIAF+EDPDGYK E
Sbjct: 63  TDKYDLGNGFGHIALGVEDIYSTCDKIRDKGGKVVREPGPMKHGTTVIAFVEDPDGYKIE 122

Query: 121 LLE 123
           L++
Sbjct: 123 LIQ 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	262
255546389	369	lactoylglutathione lyase, putative [Rici	1.0	0.710	0.954	1e-146
224143607	282	predicted protein [Populus trichocarpa]	1.0	0.929	0.950	1e-144
224119744	355	predicted protein [Populus trichocarpa]	1.0	0.738	0.938	1e-144
356523753	356	PREDICTED: probable lactoylglutathione l	1.0	0.735	0.935	1e-143
359484559	362	PREDICTED: probable lactoylglutathione l	1.0	0.723	0.931	1e-143
297841409	353	hypothetical protein ARALYDRAFT_475823 [	1.0	0.742	0.942	1e-143
225445150	355	PREDICTED: probable lactoylglutathione l	1.0	0.738	0.931	1e-143
15220397	350	putative lactoylglutathione lyase, chlor	1.0	0.748	0.938	1e-143
356513161	362	PREDICTED: probable lactoylglutathione l	1.0	0.723	0.927	1e-143
21537360	350	glyoxalase I, putative [Arabidopsis thal	1.0	0.748	0.935	1e-143

>gi|255546389|ref|XP_002514254.1| lactoylglutathione lyase, putative [Ricinus communis] gi|223546710|gb|EEF48208.1| lactoylglutathione lyase, putative [Ricinus communis]

 Score =  522 bits (1344), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 250/262 (95%), Positives = 257/262 (98%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
           MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEE+YTNAFLGYGPEDSHFVIELTYNYG
Sbjct: 108 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDSHFVIELTYNYG 167

Query: 61  VDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 120
           VDKYDIGT FGHFGIAV+DVAKTVELIKAKGGKVTREP PVKGG TVIAFIEDPDGYKFE
Sbjct: 168 VDKYDIGTAFGHFGIAVEDVAKTVELIKAKGGKVTREPAPVKGGKTVIAFIEDPDGYKFE 227

Query: 121 LLERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKN 180
           LLERGPTPEPLCQVMLRVGDLDRSINFYE+AFGMELLRKRDNPEYKYTIAMMGYGPEDKN
Sbjct: 228 LLERGPTPEPLCQVMLRVGDLDRSINFYEKAFGMELLRKRDNPEYKYTIAMMGYGPEDKN 287

Query: 181 VVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITA 240
            VLELTYNYGVT+YDKGNAYAQIAIGTDDVYKTAE IKLFGGK+TREPGPLPGINTKITA
Sbjct: 288 AVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEGIKLFGGKITREPGPLPGINTKITA 347

Query: 241 CLDPDGWKTVFVDNVDFLKELE 262
           CLDPDGWK+VFVDN+DFLKELE
Sbjct: 348 CLDPDGWKSVFVDNIDFLKELE 369

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224143607|ref|XP_002325014.1| predicted protein [Populus trichocarpa] gi|222866448|gb|EEF03579.1| predicted protein [Populus trichocarpa]

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 249/262 (95%), Positives = 259/262 (98%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
           MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEE+Y NAFLGYGPEDSHFVIELTYNYG
Sbjct: 21  MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEERYANAFLGYGPEDSHFVIELTYNYG 80

Query: 61  VDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 120
           VD YDIGTGFGHFGIA++DVAKTVELIKAKGGKVTREPGPVKGG+TVIAFIEDPDGYKFE
Sbjct: 81  VDSYDIGTGFGHFGIALEDVAKTVELIKAKGGKVTREPGPVKGGSTVIAFIEDPDGYKFE 140

Query: 121 LLERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKN 180
           LLERGPTPEPLCQVMLRVGDLDRSINFYE+AFGMELLRKRDNPEYKYTIAMMGYGPEDKN
Sbjct: 141 LLERGPTPEPLCQVMLRVGDLDRSINFYEKAFGMELLRKRDNPEYKYTIAMMGYGPEDKN 200

Query: 181 VVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITA 240
            VLELTYNYGVT+YDKGNAYAQIAIGTDDVY+TAEA+KLFGGKVTREPGPLPGI+TKITA
Sbjct: 201 AVLELTYNYGVTEYDKGNAYAQIAIGTDDVYRTAEAVKLFGGKVTREPGPLPGISTKITA 260

Query: 241 CLDPDGWKTVFVDNVDFLKELE 262
           CLDPDGWKTVFVDN+DFLKELE
Sbjct: 261 CLDPDGWKTVFVDNIDFLKELE 282

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224119744|ref|XP_002331150.1| predicted protein [Populus trichocarpa] gi|222873233|gb|EEF10364.1| predicted protein [Populus trichocarpa]

 Score =  516 bits (1328), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 246/262 (93%), Positives = 257/262 (98%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
           MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEE+YTNAFLGYGPEDSHFVIELTYNYG
Sbjct: 92  MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDSHFVIELTYNYG 151

Query: 61  VDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 120
           VD YDIG GFGHFGIAV+DVAKTVELIKAKGGKV REPGPVKGG+TVIAFIEDPDGYKFE
Sbjct: 152 VDSYDIGAGFGHFGIAVEDVAKTVELIKAKGGKVNREPGPVKGGSTVIAFIEDPDGYKFE 211

Query: 121 LLERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKN 180
           LLERGPTPEPLCQVMLRVGDLDRSINFYE+AFGM+LLRKRDNPEYKYTIAMMGYG EDKN
Sbjct: 212 LLERGPTPEPLCQVMLRVGDLDRSINFYEKAFGMKLLRKRDNPEYKYTIAMMGYGSEDKN 271

Query: 181 VVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITA 240
            VLELTYNYGVT+YDKGNAYAQIAIGTDDVY+TAEA+++FGGKVTREPGPLPGINTKITA
Sbjct: 272 CVLELTYNYGVTEYDKGNAYAQIAIGTDDVYRTAEAVEIFGGKVTREPGPLPGINTKITA 331

Query: 241 CLDPDGWKTVFVDNVDFLKELE 262
           CLDPDGWKTVFVDN+DFLKELE
Sbjct: 332 CLDPDGWKTVFVDNIDFLKELE 353

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356523753|ref|XP_003530499.1| PREDICTED: probable lactoylglutathione lyase, chloroplast-like [Glycine max]

 Score =  514 bits (1324), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 245/262 (93%), Positives = 256/262 (97%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
           MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG
Sbjct: 95  MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 154

Query: 61  VDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 120
           VDKYDIGTGFGHFGIAVDDVAK VELI+AKGGK+TREPGPVKGG +VIAFIEDPDGYKFE
Sbjct: 155 VDKYDIGTGFGHFGIAVDDVAKAVELIRAKGGKITREPGPVKGGRSVIAFIEDPDGYKFE 214

Query: 121 LLERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKN 180
           L+ERGPTPEPLCQVMLRVGDL+RSI FYE+AFGMELLR RDNPEYKYTIAM+GYGPEDK+
Sbjct: 215 LIERGPTPEPLCQVMLRVGDLNRSIEFYEKAFGMELLRTRDNPEYKYTIAMLGYGPEDKS 274

Query: 181 VVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITA 240
            VLELTYNYGVT+YDKGNAYAQIAIGTDDVYKTAEAIKL GGK+TREPGPLPGINTKITA
Sbjct: 275 TVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKLAGGKITREPGPLPGINTKITA 334

Query: 241 CLDPDGWKTVFVDNVDFLKELE 262
           CLDPDGWK+VFVDNVDFLKELE
Sbjct: 335 CLDPDGWKSVFVDNVDFLKELE 356

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359484559|ref|XP_003633121.1| PREDICTED: probable lactoylglutathione lyase, chloroplast-like isoform 2 [Vitis vinifera] gi|297738782|emb|CBI28027.3| unnamed protein product [Vitis vinifera]

 Score =  513 bits (1322), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 244/262 (93%), Positives = 257/262 (98%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
           MLHVVYRVGDLDRTIKFYTECLGMKLLR+RDIPEE+YTNAFLGYGPEDSHFVIELTYNYG
Sbjct: 101 MLHVVYRVGDLDRTIKFYTECLGMKLLRRRDIPEERYTNAFLGYGPEDSHFVIELTYNYG 160

Query: 61  VDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 120
           VDKYDIG GFGHFGIAV+DV KTV+LIKAKGGKVTREPGPVKGG+TVIAFIEDPDGYKFE
Sbjct: 161 VDKYDIGAGFGHFGIAVEDVTKTVDLIKAKGGKVTREPGPVKGGSTVIAFIEDPDGYKFE 220

Query: 121 LLERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKN 180
           LLERGPTPEPLCQVMLRVGDLDRSINFYE+AFGMELLRKRDNPEYKYTIAMMGYGPEDKN
Sbjct: 221 LLERGPTPEPLCQVMLRVGDLDRSINFYEKAFGMELLRKRDNPEYKYTIAMMGYGPEDKN 280

Query: 181 VVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITA 240
            VLELTYNYGV++YDKGN YAQIAIGTDDVYKTAEAIKL GGK+TREPGPLPGINTKITA
Sbjct: 281 AVLELTYNYGVSEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITA 340

Query: 241 CLDPDGWKTVFVDNVDFLKELE 262
           C+DPDGWK+VFVDN+DFLKEL+
Sbjct: 341 CVDPDGWKSVFVDNIDFLKELD 362

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297841409|ref|XP_002888586.1| hypothetical protein ARALYDRAFT_475823 [Arabidopsis lyrata subsp. lyrata] gi|297334427|gb|EFH64845.1| hypothetical protein ARALYDRAFT_475823 [Arabidopsis lyrata subsp. lyrata]

 Score =  513 bits (1322), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 247/262 (94%), Positives = 255/262 (97%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
           MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG
Sbjct: 92  MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 151

Query: 61  VDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 120
           VDKYDIG GFGHFGIAVDDVAKTVEL+KAKGGKV REPGPVKGG TVIAFIEDPDGYKFE
Sbjct: 152 VDKYDIGAGFGHFGIAVDDVAKTVELVKAKGGKVAREPGPVKGGKTVIAFIEDPDGYKFE 211

Query: 121 LLERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKN 180
           LLERGPTPEPLCQVMLRVGDLDR+I FYE+AFGMELLR RDNPEYKYTIAMMGYGPEDK 
Sbjct: 212 LLERGPTPEPLCQVMLRVGDLDRAIKFYEKAFGMELLRTRDNPEYKYTIAMMGYGPEDKF 271

Query: 181 VVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITA 240
            VLELTYNYGVT+YDKGNAYAQIAIGTDDVYKTAEAIKLFGGK+TREPGPLPGI+TKITA
Sbjct: 272 PVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKITREPGPLPGISTKITA 331

Query: 241 CLDPDGWKTVFVDNVDFLKELE 262
           CLDPDGWK+VFVDN+DFLKELE
Sbjct: 332 CLDPDGWKSVFVDNIDFLKELE 353

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225445150|ref|XP_002284023.1| PREDICTED: probable lactoylglutathione lyase, chloroplast-like isoform 1 [Vitis vinifera]

 Score =  513 bits (1321), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 244/262 (93%), Positives = 257/262 (98%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
           MLHVVYRVGDLDRTIKFYTECLGMKLLR+RDIPEE+YTNAFLGYGPEDSHFVIELTYNYG
Sbjct: 94  MLHVVYRVGDLDRTIKFYTECLGMKLLRRRDIPEERYTNAFLGYGPEDSHFVIELTYNYG 153

Query: 61  VDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 120
           VDKYDIG GFGHFGIAV+DV KTV+LIKAKGGKVTREPGPVKGG+TVIAFIEDPDGYKFE
Sbjct: 154 VDKYDIGAGFGHFGIAVEDVTKTVDLIKAKGGKVTREPGPVKGGSTVIAFIEDPDGYKFE 213

Query: 121 LLERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKN 180
           LLERGPTPEPLCQVMLRVGDLDRSINFYE+AFGMELLRKRDNPEYKYTIAMMGYGPEDKN
Sbjct: 214 LLERGPTPEPLCQVMLRVGDLDRSINFYEKAFGMELLRKRDNPEYKYTIAMMGYGPEDKN 273

Query: 181 VVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITA 240
            VLELTYNYGV++YDKGN YAQIAIGTDDVYKTAEAIKL GGK+TREPGPLPGINTKITA
Sbjct: 274 AVLELTYNYGVSEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITA 333

Query: 241 CLDPDGWKTVFVDNVDFLKELE 262
           C+DPDGWK+VFVDN+DFLKEL+
Sbjct: 334 CVDPDGWKSVFVDNIDFLKELD 355

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15220397|ref|NP_176896.1| putative lactoylglutathione lyase, chloroplast [Arabidopsis thaliana] gi|75162595|sp|Q8W593.1|LGUC_ARATH RecName: Full=Probable lactoylglutathione lyase, chloroplast; AltName: Full=Glyoxalase I; Flags: Precursor gi|16930396|gb|AAL31884.1|AF419551_1 At1g67280/F1N21_10 [Arabidopsis thaliana] gi|19310505|gb|AAL84986.1| At1g67280/F1N21_10 [Arabidopsis thaliana] gi|332196500|gb|AEE34621.1| putative lactoylglutathione lyase, chloroplast [Arabidopsis thaliana]

 Score =  512 bits (1319), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 246/262 (93%), Positives = 256/262 (97%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
           MLHVVYRVGD+DRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG
Sbjct: 89  MLHVVYRVGDMDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 148

Query: 61  VDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 120
           VDKYDIG GFGHFGIAVDDVAKTVEL+KAKGGKV+REPGPVKGG TVIAFIEDPDGYKFE
Sbjct: 149 VDKYDIGAGFGHFGIAVDDVAKTVELVKAKGGKVSREPGPVKGGKTVIAFIEDPDGYKFE 208

Query: 121 LLERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKN 180
           LLERGPTPEPLCQVMLRVGDLDR+I FYE+AFGMELLR RDNPEYKYTIAMMGYGPEDK 
Sbjct: 209 LLERGPTPEPLCQVMLRVGDLDRAIKFYEKAFGMELLRTRDNPEYKYTIAMMGYGPEDKF 268

Query: 181 VVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITA 240
            VLELTYNYGVT+YDKGNAYAQIAIGTDDVYKTAEAIKLFGGK+TREPGPLPGI+TKITA
Sbjct: 269 PVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKITREPGPLPGISTKITA 328

Query: 241 CLDPDGWKTVFVDNVDFLKELE 262
           CLDPDGWK+VFVDN+DFLKELE
Sbjct: 329 CLDPDGWKSVFVDNIDFLKELE 350

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356513161|ref|XP_003525282.1| PREDICTED: probable lactoylglutathione lyase, chloroplast-like [Glycine max]

 Score =  512 bits (1318), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 243/262 (92%), Positives = 255/262 (97%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
           MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG
Sbjct: 101 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 160

Query: 61  VDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 120
           VDKYDIGTGFGHFGIAVDDVAK VELI+AKGGK+TREPGPVKGG +VIAFIEDPDGYKFE
Sbjct: 161 VDKYDIGTGFGHFGIAVDDVAKAVELIRAKGGKITREPGPVKGGRSVIAFIEDPDGYKFE 220

Query: 121 LLERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKN 180
           L+ERGPTPEPLCQVMLRVGDL+RSI FYE+AFGMELLR RDNPEYKYTIAM+GYGPEDK+
Sbjct: 221 LIERGPTPEPLCQVMLRVGDLNRSIEFYEKAFGMELLRTRDNPEYKYTIAMLGYGPEDKS 280

Query: 181 VVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITA 240
            VLELTYNYGVT+YDKGNAYAQIA+GTDDVYKTAEAIKL GGK+TREPG LPGINTKITA
Sbjct: 281 TVLELTYNYGVTEYDKGNAYAQIAVGTDDVYKTAEAIKLAGGKITREPGALPGINTKITA 340

Query: 241 CLDPDGWKTVFVDNVDFLKELE 262
           CLDPDGWK+VFVDNVDFLKELE
Sbjct: 341 CLDPDGWKSVFVDNVDFLKELE 362

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21537360|gb|AAM61701.1| glyoxalase I, putative [Arabidopsis thaliana]

 Score =  511 bits (1317), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 245/262 (93%), Positives = 256/262 (97%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
           MLHVVYRVGD+DRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG
Sbjct: 89  MLHVVYRVGDMDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 148

Query: 61  VDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 120
           VDKYDIG GFGHFGIAVDDVAKTVEL+KAKGGKV+REPGPVKGG TVIAFIEDPDGYKFE
Sbjct: 149 VDKYDIGAGFGHFGIAVDDVAKTVELVKAKGGKVSREPGPVKGGKTVIAFIEDPDGYKFE 208

Query: 121 LLERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKN 180
           LLERGPTPEPLCQVMLRVGDLDR+I FYE+AFGMELLR RDNPEYKYTIAMMGYGPEDK 
Sbjct: 209 LLERGPTPEPLCQVMLRVGDLDRAIKFYEKAFGMELLRTRDNPEYKYTIAMMGYGPEDKF 268

Query: 181 VVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITA 240
            VLELTYNYGVT+YDKGNAYAQI+IGTDDVYKTAEAIKLFGGK+TREPGPLPGI+TKITA
Sbjct: 269 PVLELTYNYGVTEYDKGNAYAQISIGTDDVYKTAEAIKLFGGKITREPGPLPGISTKITA 328

Query: 241 CLDPDGWKTVFVDNVDFLKELE 262
           CLDPDGWK+VFVDN+DFLKELE
Sbjct: 329 CLDPDGWKSVFVDNIDFLKELE 350

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	262
TAIR|locus:2019574	350	AT1G67280 [Arabidopsis thalian	1.0	0.748	0.938	6.7e-136
UNIPROTKB|P0AC81	135	gloA "GloA" [Escherichia coli	0.469	0.911	0.634	5.3e-40
TIGR_CMR|SO_2044	136	SO_2044 "lactoylglutathione ly	0.469	0.904	0.604	6.3e-37
DICTYBASE|DDB_G0291265	136	gloA "glyoxylase I" [Dictyoste	0.469	0.904	0.601	6.3e-37
UNIPROTKB|Q9KT93	138	gloA "Probable lactoylglutathi	0.469	0.891	0.601	1.7e-36
TIGR_CMR|VC_1010	138	VC_1010 "lactoylglutathione ly	0.469	0.891	0.601	1.7e-36
ZFIN|ZDB-GENE-040912-38	298	glod4 "glyoxalase domain conta	0.916	0.805	0.321	4.6e-25
UNIPROTKB|Q9HC38	313	GLOD4 "Glyoxalase domain-conta	0.797	0.667	0.313	5.4e-23
RGD|1307010	298	Glod4 "glyoxalase domain conta	0.927	0.815	0.290	1.3e-22
UNIPROTKB|F1RHJ9	496	GLOD4 "Uncharacterized protein	0.927	0.489	0.305	4.2e-22

TAIR|locus:2019574 AT1G67280 [Arabidopsis thaliana (taxid:3702)]

 Score = 1331 (473.6 bits), Expect = 6.7e-136, P = 6.7e-136
 Identities = 246/262 (93%), Positives = 256/262 (97%)

Query:     1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
             MLHVVYRVGD+DRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG
Sbjct:    89 MLHVVYRVGDMDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 148

Query:    61 VDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 120
             VDKYDIG GFGHFGIAVDDVAKTVEL+KAKGGKV+REPGPVKGG TVIAFIEDPDGYKFE
Sbjct:   149 VDKYDIGAGFGHFGIAVDDVAKTVELVKAKGGKVSREPGPVKGGKTVIAFIEDPDGYKFE 208

Query:   121 LLERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKN 180
             LLERGPTPEPLCQVMLRVGDLDR+I FYE+AFGMELLR RDNPEYKYTIAMMGYGPEDK 
Sbjct:   209 LLERGPTPEPLCQVMLRVGDLDRAIKFYEKAFGMELLRTRDNPEYKYTIAMMGYGPEDKF 268

Query:   181 VVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITA 240
              VLELTYNYGVT+YDKGNAYAQIAIGTDDVYKTAEAIKLFGGK+TREPGPLPGI+TKITA
Sbjct:   269 PVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKITREPGPLPGISTKITA 328

Query:   241 CLDPDGWKTVFVDNVDFLKELE 262
             CLDPDGWK+VFVDN+DFLKELE
Sbjct:   329 CLDPDGWKSVFVDNIDFLKELE 350

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;ISS

GO:0005739 "mitochondrion" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0046872 "metal ion binding" evidence=IEA

GO:0031977 "thylakoid lumen" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009409 "response to cold" evidence=IEP

GO:0010319 "stromule" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=RCA

UNIPROTKB|P0AC81 gloA "GloA" [Escherichia coli K-12 (taxid:83333)]

 Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
 Identities = 78/123 (63%), Positives = 96/123 (78%)

Query:     1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
             +LH + RVGDL R+I FYT+ LGMKLLR  + PE KY+ AF+GYGPE    VIELTYN+G
Sbjct:     3 LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWG 62

Query:    61 VDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 120
             VDKY++GT +GH  ++VD+ A+  E I+  GG VTRE GPVKGG TVIAF+EDPDGYK E
Sbjct:    63 VDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIE 122

Query:   121 LLE 123
             L+E
Sbjct:   123 LIE 125

GO:0016151 "nickel cation binding" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;IDA

GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=IMP

TIGR_CMR|SO_2044 SO_2044 "lactoylglutathione lyase" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
 Identities = 75/124 (60%), Positives = 92/124 (74%)

Query:     1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDS-HFVIELTYNY 59
             +LH + RVG+L+R+I FYT+ LGMKLLR  + PE KY+ AF+GYG E +   VIELTYN+
Sbjct:     4 LLHTMIRVGNLERSIAFYTQVLGMKLLRTSENPEYKYSLAFVGYGEESTGQAVIELTYNW 63

Query:    60 GVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 119
             G +KYD+GTGFGH  I  DD+    E I A GGKVTR PGPV GG T IAF+EDPDGYK 
Sbjct:    64 GTEKYDLGTGFGHIAIGDDDIYARCEAIAAAGGKVTRAPGPVAGGTTEIAFVEDPDGYKI 123

Query:   120 ELLE 123
             E ++
Sbjct:   124 EFIQ 127

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

DICTYBASE|DDB_G0291265 gloA "glyoxylase I" [Dictyostelium discoideum (taxid:44689)]

 Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
 Identities = 74/123 (60%), Positives = 95/123 (77%)

Query:     1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
             +LH + RVG+L+++++FY + LGMKLLRK +  E KYT AF+GY  ED + VIELTYN+G
Sbjct:     4 ILHTMLRVGNLEKSLQFYIDVLGMKLLRKSENVEYKYTLAFVGYTNEDENAVIELTYNWG 63

Query:    61 VDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 120
             V+KY++GT FGH  I VDDV +TVE I+  GGKV RE  PV GG TVIAF+EDPD YK E
Sbjct:    64 VEKYELGTAFGHIAIGVDDVYETVERIRKSGGKVAREAAPVLGGTTVIAFVEDPDNYKIE 123

Query:   121 LLE 123
             L++
Sbjct:   124 LIQ 126

GO:0046872 "metal ion binding" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;ISS

GO:0005575 "cellular_component" evidence=ND

GO:0006749 "glutathione metabolic process" evidence=ISS

GO:0016829 "lyase activity" evidence=IEA

UNIPROTKB|Q9KT93 gloA "Probable lactoylglutathione lyase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
 Identities = 74/123 (60%), Positives = 91/123 (73%)

Query:     1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
             +LH + RVGDLD++I+FYT+ +GM LLRK +  E KYT AFLGYG E    VIELTYN+G
Sbjct:     6 ILHTMLRVGDLDKSIEFYTQVMGMSLLRKNENTEYKYTLAFLGYGDESQGAVIELTYNWG 65

Query:    61 VDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 120
             V  Y+ G  +GH  I VDD+  T + IKA GG VTREPGPVKGG T IAF++DPDGY  E
Sbjct:    66 VADYEKGNAYGHIAIGVDDIYATCDTIKAAGGIVTREPGPVKGGTTHIAFVKDPDGYMIE 125

Query:   121 LLE 123
             L++
Sbjct:   126 LIQ 128

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0006749 "glutathione metabolic process" evidence=ISS

TIGR_CMR|VC_1010 VC_1010 "lactoylglutathione lyase" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
 Identities = 74/123 (60%), Positives = 91/123 (73%)

Query:     1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
             +LH + RVGDLD++I+FYT+ +GM LLRK +  E KYT AFLGYG E    VIELTYN+G
Sbjct:     6 ILHTMLRVGDLDKSIEFYTQVMGMSLLRKNENTEYKYTLAFLGYGDESQGAVIELTYNWG 65

Query:    61 VDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 120
             V  Y+ G  +GH  I VDD+  T + IKA GG VTREPGPVKGG T IAF++DPDGY  E
Sbjct:    66 VADYEKGNAYGHIAIGVDDIYATCDTIKAAGGIVTREPGPVKGGTTHIAFVKDPDGYMIE 125

Query:   121 LLE 123
             L++
Sbjct:   126 LIQ 128

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0006749 "glutathione metabolic process" evidence=ISS

ZFIN|ZDB-GENE-040912-38 glod4 "glyoxalase domain containing 4" [Danio rerio (taxid:7955)]

 Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
 Identities = 87/271 (32%), Positives = 129/271 (47%)

Query:     2 LHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEE-----------KYTNAFLGYGPEDSH 50
             LH V++VGD  +T  FY + LGMK+LR  +  E            K++   +G+GPED H
Sbjct:     7 LHFVFKVGDRTKTATFYRDVLGMKILRHEEFEEGCKATCNGPYDGKWSKTMVGFGPEDDH 66

Query:    51 FVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAF 110
             FV ELTYNYGV +Y +G  F   G+ +   A+ V    AK     R   P+      +  
Sbjct:    67 FVAELTYNYGVGEYRLGNDF--LGLTLQS-AQAVS--NAK-----RLNWPLTQVGDCLYM 116

Query:   111 IEDPDGYKFELLERG-PTPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTI 169
              E P GY+F L+++  P  +P+ +V L V DL RS++++    GM+++ K ++ +    I
Sbjct:   117 TEAPGGYRFYLIDKEQPNSDPVQKVSLAVSDLQRSVHYWSGLLGMKVIEKNEDKK----I 172

Query:   170 AMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPG 229
             A+MG+   D    LEL    G  D+         A   D +      +K    K+     
Sbjct:   173 AVMGFS--DNQCKLELQDIGGAVDHGTAFGRIAFACPRDQLPDIEALMKKDSEKIITPLV 230

Query:   230 PL--PGINTKITACL-DPDGWKTVFVDNVDF 257
              L  PG  T     L DPDG +  FV +  F
Sbjct:   231 SLDTPGKATVEVVILGDPDGHEICFVGDEAF 261

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q9HC38 GLOD4 "Glyoxalase domain-containing protein 4" [Homo sapiens (taxid:9606)]

 Score = 213 (80.0 bits), Expect = 5.4e-23, Sum P(2) = 5.4e-23
 Identities = 72/230 (31%), Positives = 108/230 (46%)

Query:    36 KYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVT 95
             K++   +G+GPED HFV ELTYNYGV  Y +G  F   GI +   A +  +  A+  K+ 
Sbjct:    67 KWSKTMVGFGPEDDHFVAELTYNYGVGDYKLGNDF--MGITL---ASSQAVSNAR--KLE 119

Query:    96 REPGPVKGGNTVIAFIEDPDGYKFELLERG-PTPEPLCQVMLRVGDLDRSINFYEQAFGM 154
                  V  G   +   E P GYKF L  R  P  +P+ +V L V DL +S+N++    GM
Sbjct:   120 WPLTEVAEG---VFETEAPGGYKFYLQNRSLPQSDPVLKVTLAVSDLQKSLNYWCNLLGM 176

Query:   155 ELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTA 214
             ++  K D  + +   A++GY   D    LEL    G  D+         +    ++    
Sbjct:   177 KIYEK-DEEKQR---ALLGYA--DNQCKLELQGVKGGVDHAAAFGRIAFSCPQKELPDLE 230

Query:   215 EAIKLFGGKVTREPGPL--PGINT-KITACLDPDGWKTVFVDNVDFLKEL 261
             + +K    K+      L  PG  T ++    DPDG +  FV +  F +EL
Sbjct:   231 DLMKRENQKILTPLVSLDTPGKATVQVVILADPDGHEICFVGDEAF-REL 279

GO:0005739 "mitochondrion" evidence=IEA

RGD|1307010 Glod4 "glyoxalase domain containing 4" [Rattus norvegicus (taxid:10116)]

 Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
 Identities = 80/275 (29%), Positives = 129/275 (46%)

Query:     2 LHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEE-----------KYTNAFLGYGPEDSH 50
             LH V++VG+  +T+ F+ + LGM++LR  +  E            K++   +G+GPED H
Sbjct:     7 LHFVFKVGNRFQTVHFFRDVLGMQVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDH 66

Query:    51 FVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAF 110
             FV ELTYNYG+  Y +G  F    +A          ++    KV       +G    +  
Sbjct:    67 FVAELTYNYGIGDYKLGNDFMGLTLASSQAVSNARRLEWPLSKVA------EG----VFE 116

Query:   111 IEDPDGYKFELLERGPTP-EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTI 169
              E P GYKF L +R P+  +P+ +V L V DL +S+N++    GM++  + +  E K+  
Sbjct:   117 TEAPGGYKFYLQDRSPSQSDPVLKVTLAVSDLQKSLNYWSNLLGMKIYEQDE--EKKW-- 172

Query:   170 AMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPG 229
             A++GY   D    LEL    G  D+         +    ++    + +K     +     
Sbjct:   173 ALLGYA--DDQCKLELQGIQGAVDHSAAFGRIAFSCPQKELPDLEDLMKRESQSILTPLV 230

Query:   230 PL--PGINT-KITACLDPDGWKTVFVDNVDFLKEL 261
              L  PG  T ++    DPDG +  FV +  F +EL
Sbjct:   231 SLDTPGKATVQVVILADPDGHEICFVGDEAF-REL 264

GO:0005739 "mitochondrion" evidence=IEA;ISO

UNIPROTKB|F1RHJ9 GLOD4 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 263 (97.6 bits), Expect = 4.2e-22, P = 4.2e-22
 Identities = 84/275 (30%), Positives = 129/275 (46%)

Query:     2 LHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEE-----------KYTNAFLGYGPEDSH 50
             LH V++VG+  +T  FY + LGMK+LR  +  E            K++   +G+GPED H
Sbjct:   205 LHFVFKVGNRFQTAYFYRDVLGMKILRHEEFDEGCKAACNGPYDGKWSKTMVGFGPEDDH 264

Query:    51 FVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAF 110
             FV ELTYNYG+  Y +G  F   GI +   A +  +  A+  K+      V  G   +  
Sbjct:   265 FVAELTYNYGIGNYKLGNDF--MGITL---ASSQAVSNAR--KLEWPLSEVAEG---VYE 314

Query:   111 IEDPDGYKFELLERGPT-PEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTI 169
              E P GYKF L    P   +P+ +V L V DL +S+N++    GM++  K +  +     
Sbjct:   315 TEAPGGYKFYLQNCSPPRSDPVLKVTLAVSDLQKSLNYWSNLLGMKIYEKDEKTQR---- 370

Query:   170 AMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPG 229
             A++GY   D    LEL    G  D+         +    ++ +  + +K    K+     
Sbjct:   371 ALLGYA--DNQCKLELQGIQGAVDHAAAFGRIAFSCPQKELPELEDLMKRENQKILTPLV 428

Query:   230 PL--PGINT-KITACLDPDGWKTVFVDNVDFLKEL 261
              L  PG  T ++    DPDG +  FV +  F +EL
Sbjct:   429 SLDTPGKATVQVVILADPDGHEICFVGDEAF-REL 462

GO:0005739 "mitochondrion" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8W593	LGUC_ARATH	4, ., 4, ., 1, ., 5	0.9389	1.0	0.7485	yes	no
Q39366	LGUL_BRAOG	4, ., 4, ., 1, ., 5	0.7368	0.9961	0.9255	N/A	no
Q948T6	LGUL_ORYSJ	4, ., 4, ., 1, ., 5	0.7528	1.0	0.9003	no	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	4.4.1	LOW CONFIDENCE prediction!
4th Layer	4.4.1.5	0.991
3rd Layer	2.5.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	262
PLN02300	286	PLN02300, PLN02300, lactoylglutathione lyase	0.0
TIGR00068	150	TIGR00068, glyox_I, lactoylglutathione lyase	4e-81
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	1e-58
TIGR00068	150	TIGR00068, glyox_I, lactoylglutathione lyase	1e-51
PRK10291	129	PRK10291, PRK10291, glyoxalase I; Provisional	1e-50
PRK10291	129	PRK10291, PRK10291, glyoxalase I; Provisional	3e-40
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	9e-38
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	2e-29
cd08358	127	cd08358, Glo_EDI_BRP_like_21, This conserved domai	4e-26
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	4e-23
PLN02367	233	PLN02367, PLN02367, lactoylglutathione lyase	2e-20
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	4e-20
PLN03042	185	PLN03042, PLN03042, Lactoylglutathione lyase; Prov	4e-20
cd08358	127	cd08358, Glo_EDI_BRP_like_21, This conserved domai	3e-16
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	1e-13
PLN02367	233	PLN02367, PLN02367, lactoylglutathione lyase	2e-13
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	8e-13
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	7e-12
PLN03042	185	PLN03042, PLN03042, Lactoylglutathione lyase; Prov	1e-11
COG3324	127	COG3324, COG3324, Predicted enzyme related to lact	1e-09
cd07249	128	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)	2e-09
cd07245	114	cd07245, Glo_EDI_BRP_like_9, This conserved domain	2e-09
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	3e-09
cd07247	114	cd07247, SgaA_N_like, N-terminal domain of Strepto	5e-09
pfam13669	110	pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resi	2e-08
COG3324	127	COG3324, COG3324, Predicted enzyme related to lact	3e-08
cd07242	128	cd07242, Glo_EDI_BRP_like_6, This conserved domain	3e-08
cd08362	120	cd08362, BphC5-RrK37_N_like, N-terminal, non-catal	1e-07
cd08346	126	cd08346, PcpA_N_like, N-terminal domain of Sphingo	3e-07
cd07262	123	cd07262, Glo_EDI_BRP_like_19, This conserved domai	4e-07
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	2e-06
cd07247	114	cd07247, SgaA_N_like, N-terminal domain of Strepto	2e-06
cd08345	113	cd08345, Fosfomycin_RP, Fosfomycin resistant prote	4e-06
cd08348	134	cd08348, BphC2-C3-RGP6_C_like, The single-domain 2	4e-06
cd07263	120	cd07263, Glo_EDI_BRP_like_16, This conserved domai	5e-06
cd08352	125	cd08352, Glo_EDI_BRP_like_1, This conserved domain	8e-06
TIGR02295	294	TIGR02295, HpaD, 3,4-dihydroxyphenylacetate 2,3-di	9e-06
cd07244	121	cd07244, FosA, FosA, a Fosfomycin resistance prote	9e-06
TIGR03081	128	TIGR03081, metmalonyl_epim, methylmalonyl-CoA epim	1e-05
cd07255	125	cd07255, Glo_EDI_BRP_like_12, This conserved domai	2e-05
cd07254	120	cd07254, Glo_EDI_BRP_like_20, This conserved domai	2e-05
cd07251	120	cd07251, Glo_EDI_BRP_like_10, This conserved domai	2e-05
cd07255	125	cd07255, Glo_EDI_BRP_like_12, This conserved domai	3e-05
cd08349	112	cd08349, BLMA_like, Bleomycin binding protein (BLM	3e-05
cd07253	125	cd07253, Glo_EDI_BRP_like_2, This conserved domain	3e-05
cd07267	113	cd07267, THT_Oxygenase_N, N-terminal domain of 2,4	3e-05
cd08354	122	cd08354, Glo_EDI_BRP_like_13, This conserved domai	1e-04
cd08342	136	cd08342, HPPD_N_like, N-terminal domain of 4-hydro	1e-04
cd07262	123	cd07262, Glo_EDI_BRP_like_19, This conserved domai	2e-04
TIGR01263	353	TIGR01263, 4HPPD, 4-hydroxyphenylpyruvate dioxygen	2e-04
cd07237	154	cd07237, BphC1-RGP6_C_like, C-terminal domain of 2	4e-04
cd07266	121	cd07266, HPCD_N_class_II, N-terminal domain of 3,4	0.001
cd08343	131	cd08343, ED_TypeI_classII_C, C-terminal domain of	0.003
pfam13468	174	pfam13468, Glyoxalase_3, Glyoxalase-like domain	0.003
cd07254	120	cd07254, Glo_EDI_BRP_like_20, This conserved domai	0.004
cd08354	122	cd08354, Glo_EDI_BRP_like_13, This conserved domai	0.004

>gnl|CDD|215169 PLN02300, PLN02300, lactoylglutathione lyase

 Score =  558 bits (1439), Expect = 0.0
 Identities = 242/262 (92%), Positives = 256/262 (97%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
           MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDS+FV+ELTYNYG
Sbjct: 25  MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFVVELTYNYG 84

Query: 61  VDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 120
           VDKYDIGTGFGHFGIAV+DVAKTVEL+KAKGGKVTREPGPVKGG +VIAF++DPDGYKFE
Sbjct: 85  VDKYDIGTGFGHFGIAVEDVAKTVELVKAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFE 144

Query: 121 LLERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKN 180
           L++RGPTPEPLCQVMLRVGDLDRSI FYE+AFGM+LLRKRDNPEYKYTIAMMGYGPEDK 
Sbjct: 145 LIQRGPTPEPLCQVMLRVGDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGYGPEDKT 204

Query: 181 VVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITA 240
            VLELTYNYGVT+Y KGNAYAQIAIGTDDVYKTAEAIKL GGK+TREPGPLPGINTKITA
Sbjct: 205 TVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKTAEAIKLVGGKITREPGPLPGINTKITA 264

Query: 241 CLDPDGWKTVFVDNVDFLKELE 262
           CLDPDGWKTVFVDN+DFLKELE
Sbjct: 265 CLDPDGWKTVFVDNIDFLKELE 286

Length = 286

>gnl|CDD|232807 TIGR00068, glyox_I, lactoylglutathione lyase

 Score =  240 bits (613), Expect = 4e-81
 Identities = 85/133 (63%), Positives = 102/133 (76%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
           +LH + RVGDLD+++ FYTE LGMKLLRKRD PE K++ AFLGYG E S  VIELT+N+G
Sbjct: 18  LLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWG 77

Query: 61  VDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 120
            +KYD+G GFGH  I VDDV K  E ++A GG V REPGPVKGG TVIAF+EDPDGYK E
Sbjct: 78  TEKYDLGNGFGHIAIGVDDVYKACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIE 137

Query: 121 LLERGPTPEPLCQ 133
           L++R  T + L  
Sbjct: 138 LIQRKSTKDGLGN 150

Lactoylglutathione lyase is also known as aldoketomutase and glyoxalase I. Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits This model twice [Central intermediary metabolism, Amino sugars, Energy metabolism, Other]. Length = 150

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score =  181 bits (463), Expect = 1e-58
 Identities = 64/123 (52%), Positives = 82/123 (66%), Gaps = 3/123 (2%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
            LH + RV DL++++ FYT+ LGMKLLR++D PE K+T  FLGY  EDS  V+ELTYN+G
Sbjct: 1   FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWG 60

Query: 61  VD-KYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 119
            +  YD G GFGH   AVDDV    E ++  G +VT+ PG        IAFI+DPDGY  
Sbjct: 61  TEEPYDNGNGFGHLAFAVDDVYAACERLEEMGVEVTKPPGDGGMKG--IAFIKDPDGYWI 118

Query: 120 ELL 122
           EL+
Sbjct: 119 ELI 121

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|232807 TIGR00068, glyox_I, lactoylglutathione lyase

 Score =  165 bits (419), Expect = 1e-51
 Identities = 64/124 (51%), Positives = 82/124 (66%)

Query: 131 LCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYG 190
           L   MLRVGDLD+S++FY +  GM+LLRKRD PE K+++A +GYG E    V+ELT+N+G
Sbjct: 18  LLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWG 77

Query: 191 VTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTV 250
              YD GN +  IAIG DDVYK  E ++  GG V REPGP+ G  T I    DPDG+K  
Sbjct: 78  TEKYDLGNGFGHIAIGVDDVYKACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIE 137

Query: 251 FVDN 254
            +  
Sbjct: 138 LIQR 141

Lactoylglutathione lyase is also known as aldoketomutase and glyoxalase I. Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits This model twice [Central intermediary metabolism, Amino sugars, Energy metabolism, Other]. Length = 150

>gnl|CDD|182358 PRK10291, PRK10291, glyoxalase I; Provisional

 Score =  162 bits (410), Expect = 1e-50
 Identities = 76/117 (64%), Positives = 91/117 (77%)

Query: 7   RVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDI 66
           RVGDL R+I FYT  LGMKLLR  + PE KY+ AF+GYGPE    VIELTYN+GVDKY++
Sbjct: 3   RVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYEL 62

Query: 67  GTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE 123
           GT +GH  ++VD+ A+  E I+  GG VTRE GPVKGG TVIAF+EDPDGYK EL+E
Sbjct: 63  GTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIE 119

Length = 129

>gnl|CDD|182358 PRK10291, PRK10291, glyoxalase I; Provisional

 Score =  135 bits (341), Expect = 3e-40
 Identities = 63/122 (51%), Positives = 81/122 (66%)

Query: 135 MLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDY 194
           MLRVGDL RSI+FY    GM+LLR  +NPEYKY++A +GYGPE +  V+ELTYN+GV  Y
Sbjct: 1   MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKY 60

Query: 195 DKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDN 254
           + G AY  IA+  D+  +  E I+  GG VTRE GP+ G  T I    DPDG+K   ++ 
Sbjct: 61  ELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEE 120

Query: 255 VD 256
            D
Sbjct: 121 KD 122

Length = 129

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score =  128 bits (325), Expect = 9e-38
 Identities = 52/115 (45%), Positives = 69/115 (60%), Gaps = 3/115 (2%)

Query: 133 QVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVT 192
             MLRV DL++S++FY    GM+LLR++D PE K+T+  +GY  ED   VLELTYN+G  
Sbjct: 3   HTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTE 62

Query: 193 -DYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDG 246
             YD GN +  +A   DDVY   E ++  G +VT+ PG   G    I    DPDG
Sbjct: 63  EPYDNGNGFGHLAFAVDDVYAACERLEEMGVEVTKPPG--DGGMKGIAFIKDPDG 115

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score =  107 bits (268), Expect = 2e-29
 Identities = 41/122 (33%), Positives = 56/122 (45%), Gaps = 8/122 (6%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           HV  RVGDL++++ FYT+ LG KL+ + D  E    +AF          V+EL  N    
Sbjct: 4   HVALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPLRSAFF----TAGGRVLELLLNETPP 59

Query: 63  KYDIGT---GFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 119
               G           +VDDV    + +KA G ++ REPG    G     +  DPDG   
Sbjct: 60  PAAAGFGGHHIAFIAFSVDDVDAAYDRLKAAGVEIVREPGRHGWGGRYS-YFRDPDGNLI 118

Query: 120 EL 121
           EL
Sbjct: 119 EL 120

Length = 120

>gnl|CDD|176706 cd08358, Glo_EDI_BRP_like_21, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 99.0 bits (247), Expect = 4e-26
 Identities = 50/134 (37%), Positives = 71/134 (52%), Gaps = 21/134 (15%)

Query: 2   LHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPE-----------EKYTNAFLGYGPEDSH 50
           LH V++VG+ ++TIKFY E LGMK+LR  +  E            K++   +GYGPED H
Sbjct: 4   LHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDH 63

Query: 51  FVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAF 110
           FV+ELTYNYG+  Y++G  F    I        V   K     VT      +  + V   
Sbjct: 64  FVVELTYNYGIGDYELGNDFLGITIHSKQA---VSNAKKHNWPVT------EVEDGVYE- 113

Query: 111 IEDPDGYKFELLER 124
           ++ P GYKF L+++
Sbjct: 114 VKAPGGYKFYLIDK 127

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 127

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 90.2 bits (224), Expect = 4e-23
 Identities = 39/119 (32%), Positives = 51/119 (42%), Gaps = 9/119 (7%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           HV   V DL+  + FY + LG ++L +     E    AFL  G       +EL +     
Sbjct: 1   HVGLTVPDLEAAVAFYEDVLGFEVLERDGGGAE---FAFLRLG----GTRLEL-FEGDEP 52

Query: 63  KYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 121
               G G  H    VDDV   VE +KA G ++   P     G  V A+  DPDG   EL
Sbjct: 53  APPSGGGGVHLAFEVDDVDAAVERLKAAGVEILGGPREEPWGGRV-AYFRDPDGNLIEL 110

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|177995 PLN02367, PLN02367, lactoylglutathione lyase

 Score = 86.6 bits (214), Expect = 2e-20
 Identities = 55/150 (36%), Positives = 76/150 (50%), Gaps = 31/150 (20%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGY-----GPED------- 48
           M   +YR+ D   ++ FY+  LGM LL++ D PE K++  F+GY      P D       
Sbjct: 76  MQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVW 135

Query: 49  ---SHFVIELTYNYGVDK------YDIGT----GFGHFGIAVDDVAKTVELIKAKGGKVT 95
                  IELT+N+G +       Y  G     GFGH GI VDDV K  E  +  G +  
Sbjct: 136 TFGQKATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFV 195

Query: 96  REP--GPVKGGNTVIAFIEDPDGYKFELLE 123
           ++P  G +KG    IAFI+DPDGY  E+ +
Sbjct: 196 KKPNDGKMKG----IAFIKDPDGYWIEIFD 221

Length = 233

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 82.9 bits (205), Expect = 4e-20
 Identities = 39/122 (31%), Positives = 53/122 (43%), Gaps = 8/122 (6%)

Query: 133 QVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVT 192
            V LRVGDL++S++FY    G +L+ + D+ E     A    G      VLEL  N    
Sbjct: 4   HVALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPLRSAFFTAGG----RVLELLLNETPP 59

Query: 193 DYDKGNA---YAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKT 249
               G      A IA   DDV    + +K  G ++ REPG   G   + +   DPDG   
Sbjct: 60  PAAAGFGGHHIAFIAFSVDDVDAAYDRLKAAGVEIVREPGR-HGWGGRYSYFRDPDGNLI 118

Query: 250 VF 251
             
Sbjct: 119 EL 120

Length = 120

>gnl|CDD|215548 PLN03042, PLN03042, Lactoylglutathione lyase; Provisional

 Score = 84.5 bits (209), Expect = 4e-20
 Identities = 54/152 (35%), Positives = 76/152 (50%), Gaps = 31/152 (20%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGY-----GPEDS------ 49
           M   ++R+ D   ++ FY+  LGM LL++ D PE K++  FLGY      P D       
Sbjct: 28  MQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVW 87

Query: 50  ----HFVIELTYNYGVDK------YDIG----TGFGHFGIAVDDVAKTVELIKAKGGKVT 95
                  IELT+N+G +       Y  G     GFGH GI VDDV K  E  +  G +  
Sbjct: 88  TFGRKATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFV 147

Query: 96  REP--GPVKGGNTVIAFIEDPDGYKFELLERG 125
           ++P  G +KG    +AFI+DPDGY  E+ +  
Sbjct: 148 KKPDDGKMKG----LAFIKDPDGYWIEIFDLK 175

Length = 185

>gnl|CDD|176706 cd08358, Glo_EDI_BRP_like_21, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 72.8 bits (179), Expect = 3e-16
 Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 21/129 (16%)

Query: 136 LRVGDLDRSINFYEQAFGMELLRKRD---------NPEY--KYTIAMMGYGPEDKNVVLE 184
            +VG+ +++I FY +  GM++LR  +         N  Y  K++  M+GYGPED + V+E
Sbjct: 8   FKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVE 67

Query: 185 LTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDP 244
           LTYNYG+ DY+ GN +  I I +      A+              P+  +   +     P
Sbjct: 68  LTYNYGIGDYELGNDFLGITIHSKQAVSNAKKHNW----------PVTEVEDGVYEVKAP 117

Query: 245 DGWKTVFVD 253
            G+K   +D
Sbjct: 118 GGYKFYLID 126

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 127

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 65.2 bits (159), Expect = 1e-13
 Identities = 31/115 (26%), Positives = 44/115 (38%), Gaps = 8/115 (6%)

Query: 7   RVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDI 66
            V DL+    FY E LG ++       + +Y    LG       F+  +      +    
Sbjct: 2   PVSDLEAARAFYEELLGFEVEE----EDGEYAEFRLGLVLALGGFIELIGLP---EPDAP 54

Query: 67  GTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 121
           G G  H    VDD+   V  +KA GG +   P     G     ++ DPDG   EL
Sbjct: 55  GGGGVHLYFEVDDLDALVARLKAAGGTILEPPEDTPWGGR-EFYVRDPDGNLIEL 108

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|177995 PLN02367, PLN02367, lactoylglutathione lyase

 Score = 67.3 bits (164), Expect = 2e-13
 Identities = 47/147 (31%), Positives = 68/147 (46%), Gaps = 32/147 (21%)

Query: 133 QVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGY-----GPED--------- 178
           Q M R+ D   S++FY +  GM LL++ D PE K+++  MGY      P D         
Sbjct: 78  QTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTF 137

Query: 179 -KNVVLELTYNYGVTD------YDKGNA----YAQIAIGTDDVYKTAEAIKLFGGKVTRE 227
            +   +ELT+N+G         Y  GN+    +  I I  DDVYK  E  +  G +  ++
Sbjct: 138 GQKATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKK 197

Query: 228 P--GPLPGINTKITACLDPDG-WKTVF 251
           P  G + G    I    DPDG W  +F
Sbjct: 198 PNDGKMKG----IAFIKDPDGYWIEIF 220

Length = 233

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 63.6 bits (154), Expect = 8e-13
 Identities = 31/139 (22%), Positives = 47/139 (33%), Gaps = 19/139 (13%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYG-----------PEDS 49
           + HV   V DL+ +I FYT+ LG++L++      +      L +                
Sbjct: 3   IHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGF 62

Query: 50  HFVIELTYNYGV-DKYDIGT-GFGHFGIAVDDVA---KTVELIKAKGGKVTREPGPVKGG 104
                  +   V      G  G GH    VDD A     +  +   G ++        G 
Sbjct: 63  EGRAGTGFVGDVALGVPGGDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEPGRGG- 121

Query: 105 NTVIAFIEDPDGYKFELLE 123
             V  +  DPDG   EL  
Sbjct: 122 --VHVYFRDPDGILIELAT 138

Length = 138

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 60.1 bits (146), Expect = 7e-12
 Identities = 30/114 (26%), Positives = 43/114 (37%), Gaps = 9/114 (7%)

Query: 133 QVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVT 192
            V L V DL+ ++ FYE   G E+L +          A +  G       LEL +     
Sbjct: 1   HVGLTVPDLEAAVAFYEDVLGFEVLERDGGGAE---FAFLRLG----GTRLEL-FEGDEP 52

Query: 193 DYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDG 246
               G     +A   DDV    E +K  G ++   P   P    ++    DPDG
Sbjct: 53  APPSGGGGVHLAFEVDDVDAAVERLKAAGVEILGGPREEPWGG-RVAYFRDPDG 105

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|215548 PLN03042, PLN03042, Lactoylglutathione lyase; Provisional

 Score = 61.4 bits (149), Expect = 1e-11
 Identities = 45/147 (30%), Positives = 68/147 (46%), Gaps = 32/147 (21%)

Query: 133 QVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGY-----GPED--------- 178
           Q M R+ D   S++FY +  GM LL++ D PE K+++  +GY      P D         
Sbjct: 30  QTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTF 89

Query: 179 -KNVVLELTYNYGVTD------YDKGNA----YAQIAIGTDDVYKTAEAIKLFGGKVTRE 227
            +   +ELT+N+G         Y  GN+    +  I I  DDVYK  E  +  G +  ++
Sbjct: 90  GRKATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKK 149

Query: 228 P--GPLPGINTKITACLDPDG-WKTVF 251
           P  G + G    +    DPDG W  +F
Sbjct: 150 PDDGKMKG----LAFIKDPDGYWIEIF 172

Length = 185

>gnl|CDD|225861 COG3324, COG3324, Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

 Score = 54.7 bits (132), Expect = 1e-09
 Identities = 32/124 (25%), Positives = 41/124 (33%), Gaps = 34/124 (27%)

Query: 136 LRVGDLDRSINFYEQAFGMELLRKRDNPEYKYT-------------IAMMGYGPEDKNVV 182
           L V DL+R+  FYE+ FG       D  E +Y              +A  G  P      
Sbjct: 15  LPVSDLERAKAFYEKVFGWTFEDYFDMGEMRYAVFPADGAGAGGGLMARPGSPPGGGGW- 73

Query: 183 LELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACL 242
                               I    DD+  T E +   GGKV R     PG    I   +
Sbjct: 74  -------------------VIYFAVDDIDATLERVVAAGGKVLRPKTEFPGGGR-IAHFV 113

Query: 243 DPDG 246
           DP+G
Sbjct: 114 DPEG 117

Length = 127

>gnl|CDD|211350 cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)

 Score = 54.5 bits (132), Expect = 2e-09
 Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 17/132 (12%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLL-RKRDIPEEKYTNAFLGYGPEDSHFVIEL------ 55
           H+   V DL+  +KFY + LG+    R+    E+    AFLG G  +    IEL      
Sbjct: 3   HIGIAVPDLEAALKFYRDVLGVGPWEREEVPSEQGVRLAFLGLG--NVQ--IELIEPLDD 58

Query: 56  --TYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIED 113
                  ++K   G G  H    VDD+   +  +KA+G ++ +E   +  G   +AF+  
Sbjct: 59  DSPIAKFLEKR--GEGLHHIAFEVDDIDAALARLKAQGVRLLQEGPRIGAGGKRVAFLHP 116

Query: 114 PDGYKF--ELLE 123
            D      EL+E
Sbjct: 117 KDTGGVLIELVE 128

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases. Length = 128

>gnl|CDD|176669 cd07245, Glo_EDI_BRP_like_9, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 53.8 bits (130), Expect = 2e-09
 Identities = 39/122 (31%), Positives = 52/122 (42%), Gaps = 13/122 (10%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDS-HFVIELTYNYGV 61
           HV  RV DL+ +  FYT+ LG++   +   P   +  A+L  G     H +IE       
Sbjct: 3   HVALRVPDLEASRAFYTDVLGLEEGPR---PPFLFPGAWLYAGDGPQLH-LIEED---PP 55

Query: 62  DKYDIGTG-FGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIA-FIEDPDGYKF 119
           D    G G   H    VDD+      +KA G   T    P  G   V   F+ DPDG + 
Sbjct: 56  DALPEGPGRDDHIAFRVDDLDAFRARLKAAGVPYTESDVPGDG---VRQLFVRDPDGNRI 112

Query: 120 EL 121
           EL
Sbjct: 113 EL 114

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases. Length = 114

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 52.8 bits (127), Expect = 3e-09
 Identities = 23/111 (20%), Positives = 36/111 (32%), Gaps = 8/111 (7%)

Query: 136 LRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYD 195
           L V DL+ +  FYE+  G E+  +       Y    +G        +  +          
Sbjct: 1   LPVSDLEAARAFYEELLGFEVEEEDGE----YAEFRLGLVLALGGFIELIGLP---EPDA 53

Query: 196 KGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDG 246
            G     +    DD+      +K  GG +   P   P    +     DPDG
Sbjct: 54  PGGGGVHLYFEVDDLDALVARLKAAGGTILEPPEDTPW-GGREFYVRDPDG 103

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|176671 cd07247, SgaA_N_like, N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

 Score = 52.6 bits (127), Expect = 5e-09
 Identities = 29/120 (24%), Positives = 36/120 (30%), Gaps = 17/120 (14%)

Query: 8   VGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIG 67
             D +R   FY    G             Y     G G              G+ K    
Sbjct: 8   TTDPERAKAFYGAVFGWTF-EDMGDGGGDYAVFSTGGGA-----------VGGLMKAPEP 55

Query: 68  TGFGHFG----IAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE 123
                 G     AVDDV      ++A GGKV   P  +  G    A   DP+G  F L +
Sbjct: 56  AAGSPPGWLVYFAVDDVDAAAARVEAAGGKVLVPPTDI-PGVGRFAVFADPEGAVFGLWQ 114

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a streptomycin resistance protein. Length = 114

>gnl|CDD|222305 pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 50.7 bits (122), Expect = 2e-08
 Identities = 25/110 (22%), Positives = 41/110 (37%), Gaps = 3/110 (2%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           H+   V DLD    F+ + LG+          +    AF   G +     +EL      +
Sbjct: 2   HIGIVVPDLDAAAAFWVDLLGLGPWGDYRDEPQNVDLAFARLG-DGPAVEVELIQPLDGE 60

Query: 63  KYDI--GTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAF 110
            +    G G  H    VDD+   V  ++A+G +V  +          +AF
Sbjct: 61  SFLDKGGPGLHHIAYWVDDLDAAVARLEAQGVRVAPKGPRAGAAGRRVAF 110

Length = 110

>gnl|CDD|225861 COG3324, COG3324, Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

 Score = 50.8 bits (122), Expect = 3e-08
 Identities = 36/126 (28%), Positives = 49/126 (38%), Gaps = 11/126 (8%)

Query: 1   MLHVVY---RVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTY 57
              +V+    V DL+R   FY +  G       D+ E +Y   F   G      ++    
Sbjct: 7   KGTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDMGEMRYA-VFPADGAGAGGGLMA--- 62

Query: 58  NYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGY 117
                    G G      AVDD+  T+E + A GGKV R      GG   IA   DP+G 
Sbjct: 63  ---RPGSPPGGGGWVIYFAVDDIDATLERVVAAGGKVLRPKTEFPGGGR-IAHFVDPEGN 118

Query: 118 KFELLE 123
           +F L  
Sbjct: 119 RFGLWS 124

Length = 127

>gnl|CDD|176666 cd07242, Glo_EDI_BRP_like_6, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 50.7 bits (122), Expect = 3e-08
 Identities = 27/127 (21%), Positives = 41/127 (32%), Gaps = 13/127 (10%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMK--LLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
           HV   V DL+R+  FY   LG+      K       +     G      + V++      
Sbjct: 4   HVELTVRDLERSRAFYDWLLGLLGFEEVKEWEDGRSWRAGDGGT-----YLVLQQADGES 58

Query: 61  VDKYDI-GTGFGHFGIAVDDVAKT---VELIKAKGGKVTREPGPVK--GGNTVIAFIEDP 114
             ++D    G  H                 +  +G ++   P      G      F EDP
Sbjct: 59  AGRHDRRNPGLHHLAFRAPSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDP 118

Query: 115 DGYKFEL 121
           DG + EL
Sbjct: 119 DGIRLEL 125

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 128

>gnl|CDD|176710 cd08362, BphC5-RrK37_N_like, N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

 Score = 48.9 bits (117), Expect = 1e-07
 Identities = 34/125 (27%), Positives = 47/125 (37%), Gaps = 22/125 (17%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
            V   V DL     FY E  G+ ++       E     +L       H ++ L  +   D
Sbjct: 6   GVGLGVPDLAAAAAFYREVWGLSVV------AEDDGIVYLR-ATGSEHHILRLRRS---D 55

Query: 63  KYDIGTGFGHFGIA----VDDVAKTVELIKAKGGKVTREPGPVK--GGNTVIAFIEDPDG 116
           +  +      F +A    VD +A+ V    A+GG V  EPG     GG     F  DPDG
Sbjct: 56  RNRLDV--VSFSVASRADVDALARQVA---ARGGTVLSEPGATDDPGGGYGFRFF-DPDG 109

Query: 117 YKFEL 121
              E 
Sbjct: 110 RLIEF 114

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxygenases are activated by Fe(II). Length = 120

>gnl|CDD|211356 cd08346, PcpA_N_like, N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

 Score = 47.6 bits (114), Expect = 3e-07
 Identities = 33/130 (25%), Positives = 49/130 (37%), Gaps = 19/130 (14%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPED-------SHFVIEL 55
           HV     D   T+ FYT+ LG++L++K    ++  T   L +G          + F    
Sbjct: 4   HVTLVTRDAQETVDFYTDVLGLRLVKKTVNQDDPGTY-HLFFGDGLGSPGTLLTFFEWPD 62

Query: 56  TYNYGVDKYDIGTG-FGHFGIAVDDVAKTVELIK---AKGGKVTREPGPVKGGNTVIAFI 111
               G      G G   H   +V   A      +   A G  V+      + G   + F 
Sbjct: 63  AGPKG----RRGPGQIHHIAFSVPSEASLEAWRERLRAAGVPVSGV--VDRFGERSLYF- 115

Query: 112 EDPDGYKFEL 121
           EDPDG + EL
Sbjct: 116 EDPDGIRLEL 125

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. Length = 126

>gnl|CDD|176683 cd07262, Glo_EDI_BRP_like_19, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 47.5 bits (114), Expect = 4e-07
 Identities = 33/126 (26%), Positives = 43/126 (34%), Gaps = 16/126 (12%)

Query: 3   HVVYRVGDLDRTIKFYTEC---LGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY 59
           HV   V DL+R   FY      LG+K +        +     +GYG         +T  +
Sbjct: 3   HVTLGVNDLERARAFYDAVLAPLGIKRVM-------EDGPGAVGYGKGGGGPDFWVTKPF 55

Query: 60  GVDKYDIGTGFGHFGIAVDDVAKTVELIKA---KGGKVTREPG--PVKGGNTVIAFIEDP 114
             +    G G  H   A            A    GG     PG  P  G     A++ DP
Sbjct: 56  DGEPATAGNGT-HVAFAAPSREAVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDP 114

Query: 115 DGYKFE 120
           DG K E
Sbjct: 115 DGNKIE 120

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 123

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 45.9 bits (108), Expect = 2e-06
 Identities = 23/130 (17%), Positives = 36/130 (27%), Gaps = 19/130 (14%)

Query: 133 QVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYG-----------PEDKNV 181
            V L V DL+ SI+FY    G+ L++   N         + +                  
Sbjct: 5   HVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEG 64

Query: 182 VLELTYNYGVTDYDKGNA--YAQIAIGTDD---VYKTAEAIKLFGGKVTREPGPLPGINT 236
                +   V     G       +A   DD          +   G ++        G+  
Sbjct: 65  RAGTGFVGDVALGVPGGDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEPGRGGV-- 122

Query: 237 KITACLDPDG 246
                 DPDG
Sbjct: 123 -HVYFRDPDG 131

Length = 138

>gnl|CDD|176671 cd07247, SgaA_N_like, N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

 Score = 45.3 bits (108), Expect = 2e-06
 Identities = 25/113 (22%), Positives = 39/113 (34%), Gaps = 13/113 (11%)

Query: 136 LRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNV--VLELTYNYGVTD 193
           L   D +R+  FY   FG        +    Y +   G G     V  +++         
Sbjct: 6   LPTTDPERAKAFYGAVFGWTF-EDMGDGGGDYAVFSTGGGA----VGGLMKAP-----EP 55

Query: 194 YDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDG 246
                    +    DDV   A  ++  GGKV   P  +PG+  +     DP+G
Sbjct: 56  AAGSPPGWLVYFAVDDVDAAAARVEAAGGKVLVPPTDIPGV-GRFAVFADPEG 107

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a streptomycin resistance protein. Length = 114

>gnl|CDD|176693 cd08345, Fosfomycin_RP, Fosfomycin resistant protein; inhibits the biological function of fosfomycin

 Score = 44.5 bits (105), Expect = 4e-06
 Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 17/122 (13%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKY---TNAFLGYGPEDSHFVIELTYNY 59
           H+   V DL+++I FY + LG +L+      +E Y      ++    EDS    E TY +
Sbjct: 1   HITLIVKDLNKSIAFYRDILGAELIYSSS--KEAYFELAGLWICLMEEDSLQGPERTYTH 58

Query: 60  GVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 119
                        F I  ++  +  E +KA G ++  E   V+G    I F  DPDG+  
Sbjct: 59  IA-----------FQIQSEEFDEYTERLKALGVEMKPERPRVQGEGRSIYFY-DPDGHLL 106

Query: 120 EL 121
           EL
Sbjct: 107 EL 108

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases. Length = 113

>gnl|CDD|176696 cd08348, BphC2-C3-RGP6_C_like, The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

 Score = 44.9 bits (107), Expect = 4e-06
 Identities = 36/139 (25%), Positives = 51/139 (36%), Gaps = 12/139 (8%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           HVV  V DL+  ++FY + LG  +  +  +        FL   P D H  I L       
Sbjct: 4   HVVLYVRDLEAMVRFYRDVLGFTVTDRGPLGGL----VFLSRDP-DEHHQIALITGRPAA 58

Query: 63  KYDIGTGFGHFGIAVDDVAKTVEL---IKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 119
                 G  H    VD +    +L   ++A G        PV  GN    +  DPDG + 
Sbjct: 59  PPPGPAGLNHIAFEVDSLDDLRDLYERLRAAGIT---PVWPVDHGNAWSIYFRDPDGNRL 115

Query: 120 EL-LERGPTPEPLCQVMLR 137
           EL ++           ML 
Sbjct: 116 ELFVDTPWYVAQAAAFMLD 134

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are one-domain dioxygenases, which form hexamers. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, its two domains do not belong to this subfamily. Length = 134

>gnl|CDD|211353 cd07263, Glo_EDI_BRP_like_16, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 44.5 bits (106), Expect = 5e-06
 Identities = 36/130 (27%), Positives = 53/130 (40%), Gaps = 19/130 (14%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGY-----GPEDSHFV-IELT 56
            V   V D D+ + FYTE LG ++  + D+P         G+      P  S    + L 
Sbjct: 1   LVSLYVDDQDKALAFYTEKLGFEV--REDVPMGG------GFRWVTVAPPGSPETSLVLA 52

Query: 57  YNYGVDKYDIGT---GFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIED 113
                     G    G     +  DD+  T E +KA+G + T EP  +  G   +A   D
Sbjct: 53  PPANPAAMASGLQPGGTPGLVLVTDDIDATYEELKARGVEFTEEPREMPYG--TVAVFRD 110

Query: 114 PDGYKFELLE 123
           PDG  F L++
Sbjct: 111 PDGNLFVLVQ 120

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 120

>gnl|CDD|211358 cd08352, Glo_EDI_BRP_like_1, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 43.9 bits (104), Expect = 8e-06
 Identities = 42/125 (33%), Positives = 52/125 (41%), Gaps = 9/125 (7%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTY--NYG 60
           HV     D  R+ +FY E LG+ L+R+   PE K     L    E   + IEL    N  
Sbjct: 6   HVAIICSDYARSKEFYVEVLGLTLIRETYRPERKSYKLDLALNGE---YQIELFSFPNPP 62

Query: 61  VD-KYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKG-GNTVIAFIEDPDGYK 118
               Y    G  H   AV+D+   V  +KA G +V  EP  V         F  DPDG  
Sbjct: 63  PRPSYPEACGLRHLAFAVEDIEAAVAELKAHGVEV--EPIRVDEFTGKRFTFFYDPDGLP 120

Query: 119 FELLE 123
            EL E
Sbjct: 121 LELYE 125

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|213698 TIGR02295, HpaD, 3,4-dihydroxyphenylacetate 2,3-dioxygenase

 Score = 45.5 bits (108), Expect = 9e-06
 Identities = 40/169 (23%), Positives = 60/169 (35%), Gaps = 34/169 (20%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           HV  RV DLD++ +FY + LG +               +L    E  H  + LT      
Sbjct: 7   HVELRVTDLDKSREFYVDLLGFRETESDK------EYIYLRGIEEFQHHSLVLTKAP--- 57

Query: 63  KYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 119
                    + G  V   +D+ K  +  +  G  V        GG      +EDP GY  
Sbjct: 58  ----SAALSYIGFRVSKEEDLDKAADFFQKLGHPVRLVR---DGGQPEALRVEDPFGYPI 110

Query: 120 EL---------------LERGPTPEPLCQVMLRVGDLDRSINFYEQAFG 153
           E                  RG +P  L    + V D+ R++ FY++  G
Sbjct: 111 EFYFEMEKVERLLRRYHRHRGVSPVRLDHFNVFVPDVQRALRFYKEELG 159

This enzyme catalyzes the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. 4-hydroxyphenylacetate arises from the degradation of tyrosine. The substrate, 3,4-dihydroxyphenylacetate (homoprotocatechuate) arises from the action of a hydroxylase on 4-hydroxyphenylacetate. The aromatic ring is opened by this dioxygenase exo to the 3,4-diol resulting in 2-hydroxy-5-carboxymethylmuconate semialdehyde. The enzyme from Bacillus brevis contains manganese. Length = 294

>gnl|CDD|176668 cd07244, FosA, FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

 Score = 43.5 bits (103), Expect = 9e-06
 Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 19/121 (15%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           H+   V DL+R++ FY + LG KL  + D        A+L  G  D    + +  N G  
Sbjct: 4   HITLAVSDLERSVAFYVDLLGFKLHVRWD------KGAYLEAG--DLWLCLSVDANVGPA 55

Query: 63  KYDIGTGFGH--FGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 120
           K      + H  F ++ +D A   E ++  G K  +E      G++   +  DPDG+K E
Sbjct: 56  K-----DYTHYAFSVSEEDFASLKEKLRQAGVKEWKE--NTSEGDSF--YFLDPDGHKLE 106

Query: 121 L 121
           L
Sbjct: 107 L 107

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases. Length = 121

>gnl|CDD|213772 TIGR03081, metmalonyl_epim, methylmalonyl-CoA epimerase

 Score = 43.5 bits (103), Expect = 1e-05
 Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 4/125 (3%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           HV   V DL+   KFY + LG ++    ++PE+     F+  G      +  L  +  + 
Sbjct: 4   HVGIAVPDLEEAAKFYEDVLGAQVSEIEELPEQGVKVVFIALGNTKVELLEPLGEDSPIA 63

Query: 63  KY--DIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFI--EDPDGYK 118
           K+    G G  H  I VDD+   +E +K KG ++  E   +      +AF+  +   G  
Sbjct: 64  KFLEKNGGGIHHIAIEVDDIEAALETLKEKGVRLIDEEPRIGAHGKPVAFLHPKSTGGVL 123

Query: 119 FELLE 123
            EL +
Sbjct: 124 IELEQ 128

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer. Length = 128

>gnl|CDD|211352 cd07255, Glo_EDI_BRP_like_12, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 42.9 bits (102), Expect = 2e-05
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 8/53 (15%)

Query: 133 QVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLEL 185
            V LRV DL+RS+ FY+   G+E+L + D+     T      G   K  +L L
Sbjct: 5   AVTLRVADLERSLAFYQDVLGLEVLERTDS-----TAV---LGTGGKRPLLVL 49

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 125

>gnl|CDD|176677 cd07254, Glo_EDI_BRP_like_20, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 42.7 bits (101), Expect = 2e-05
 Identities = 32/128 (25%), Positives = 49/128 (38%), Gaps = 26/128 (20%)

Query: 2   LHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDS--HFVIELTYNY 59
            HV   V DL+ +I FY++  G++  + RD     Y      +  ED   +FV+      
Sbjct: 3   FHVALNVDDLEASIAFYSKLFGVEPTKVRDD----YAK----FLLEDPRLNFVLN----- 49

Query: 60  GVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAF-------IE 112
                  G G  H G+ VD      E+ +AK           K  +T   +       + 
Sbjct: 50  -ERPGAPGGGLNHLGVQVDSAE---EVAEAKARAEAAGLPTFKEEDTTCCYAVQDKVWVT 105

Query: 113 DPDGYKFE 120
           DPDG  +E
Sbjct: 106 DPDGNAWE 113

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 120

>gnl|CDD|211351 cd07251, Glo_EDI_BRP_like_10, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 42.5 bits (101), Expect = 2e-05
 Identities = 30/126 (23%), Positives = 45/126 (35%), Gaps = 26/126 (20%)

Query: 8   VGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKY--D 65
           V DL R+  FY    G K         +    AF   G      V+ L   +  ++   D
Sbjct: 6   VADLARSRAFYRA-GGWK---TSADSNDGV--AFFQLG----GLVLAL---FPREELAKD 52

Query: 66  IG-----TGFGHFGIA-----VDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPD 115
            G      GF    +A      D+V   +    A G  + + P  V  G     +  DPD
Sbjct: 53  AGVPVPPPGFSGITLAHNVRSEDEVDAVLARAAAAGATIVKPPQKVFWGG-YSGYFADPD 111

Query: 116 GYKFEL 121
           G+ +E+
Sbjct: 112 GHLWEV 117

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 120

>gnl|CDD|211352 cd07255, Glo_EDI_BRP_like_12, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 42.2 bits (100), Expect = 3e-05
 Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 7/79 (8%)

Query: 3  HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           V  RV DL+R++ FY + LG+++L + D      + A LG G +    V+E   +    
Sbjct: 5  AVTLRVADLERSLAFYQDVLGLEVLERTD------STAVLGTGGKRPLLVLEEDPDAPPA 58

Query: 63 KYDIGTGFGHFGIAVDDVA 81
               TG  HF I +   A
Sbjct: 59 PPG-TTGLYHFAILLPSRA 76

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 125

>gnl|CDD|211357 cd08349, BLMA_like, Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

 Score = 42.2 bits (100), Expect = 3e-05
 Identities = 28/114 (24%), Positives = 44/114 (38%), Gaps = 11/114 (9%)

Query: 5   VYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKY 64
           V  V D+++++ FY + LG ++  +   PE  Y  A +      +   +           
Sbjct: 3   VLPVSDIEKSLAFYRDVLGFEVDFEH--PEPLY--AQVSRD--GAQLHLSEHDGDEWVPL 56

Query: 65  DIGTGFGHFGIAVDDVAKTVELIKAKG-GKVTREPGPVKGGNTVIAFIEDPDGY 117
             G       I VDDV      +KAKG   +   P     G    A ++DPDG 
Sbjct: 57  GRGGN---VYIEVDDVDALYAELKAKGAKLIVYPPEDQPWGQREFA-VQDPDGN 106

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the larger superfamily, this family contains members with or without domain swapping. Length = 112

>gnl|CDD|176676 cd07253, Glo_EDI_BRP_like_2, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 42.2 bits (100), Expect = 3e-05
 Identities = 13/29 (44%), Positives = 20/29 (68%)

Query: 3  HVVYRVGDLDRTIKFYTECLGMKLLRKRD 31
          HVV  V D++ T+ FYT  LGM+++R  +
Sbjct: 6  HVVLTVADIEATLDFYTRVLGMEVVRFGE 34

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|176688 cd07267, THT_Oxygenase_N, N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

 Score = 41.8 bits (99), Expect = 3e-05
 Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 17/120 (14%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           HV +   DLD+  +F T+  G+++  + D  +E Y   + GYG +   FV      Y   
Sbjct: 6   HVRFEHPDLDKAERFLTD-FGLEVAARTD--DELY---YRGYGTD--PFV------YVAR 51

Query: 63  KYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL 122
           K +    F          A   +     G  V  +     GG  V   + DPDG+  EL+
Sbjct: 52  KGE-KARFVGAAFEAASRADLEKAAALPGASVIDDLEAPGGGKRVT--LTDPDGFPVELV 108

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity. Length = 113

>gnl|CDD|176702 cd08354, Glo_EDI_BRP_like_13, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 40.4 bits (95), Expect = 1e-04
 Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 12/122 (9%)

Query: 8   VGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSH--FVIELTYNYGVD-KY 64
           V DL+    FY + LG++L+ K D        AF   G       F    T   G +   
Sbjct: 8   VDDLEAAEAFYEDVLGLELMLKED-----RRLAFFWVGGRGMLLLFDPGATSTPGGEIPP 62

Query: 65  DIGTGFGHFGIAV--DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL 122
             G+G GHF  A+  +++A+    ++AKG  +  E    +GG ++  +  DPDG   EL 
Sbjct: 63  HGGSGPGHFAFAIPAEELAEWEAHLEAKGVAIESEVQWPRGGRSL--YFRDPDGNLLELA 120

Query: 123 ER 124
             
Sbjct: 121 TP 122

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 122

>gnl|CDD|176690 cd08342, HPPD_N_like, N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

 Score = 40.6 bits (96), Expect = 1e-04
 Identities = 31/127 (24%), Positives = 49/127 (38%), Gaps = 9/127 (7%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           HV + VG+  +   +++  LG + +      E+K +         D +FV+    N    
Sbjct: 3   HVEFYVGNAKQLASWFSTKLGFEPVAYH-GSEDKASYL---LRQGDINFVLNSPLNSFAP 58

Query: 63  KYDI----GTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 118
             D     G G       VDD A   E   A+G K  +EP   + G   IA I+      
Sbjct: 59  VADFLEKHGDGVCDVAFRVDDAAAAYERAVARGAKPVQEP-VEEPGELKIAAIKGYGDSL 117

Query: 119 FELLERG 125
             L++R 
Sbjct: 118 HTLVDRK 124

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, substrates, do not use alpha-ketoglutarate, and incorporate both atoms of dioxygen into the aromatic product. Both HPPD and HmaS exhibit duplicate beta barrel topology in their N- and C-terminal domains which share sequence similarity, suggestive of a gene duplication. Each protein has only one catalytic site located in at the C-terminal domain. This HPPD_N_like domain represents the N-terminal domain. Length = 136

>gnl|CDD|176683 cd07262, Glo_EDI_BRP_like_19, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 39.4 bits (93), Expect = 2e-04
 Identities = 30/124 (24%), Positives = 43/124 (34%), Gaps = 18/124 (14%)

Query: 134 VMLRVGDLDRSINFYEQAFG-MELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVT 192
           V L V DL+R+  FY+     + + R  ++         +GYG         +T  +   
Sbjct: 4   VTLGVNDLERARAFYDAVLAPLGIKRVMEDGP-----GAVGYGKGGGGPDFWVTKPFDGE 58

Query: 193 DYDKGNAYAQIAI------GTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITAC--LDP 244
               GN    +A         D  +  A A+   GG     PG  P       A    DP
Sbjct: 59  PATAGNG-THVAFAAPSREAVDAFH--AAALAA-GGTDEGAPGLRPHYGPGYYAAYVRDP 114

Query: 245 DGWK 248
           DG K
Sbjct: 115 DGNK 118

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 123

>gnl|CDD|233334 TIGR01263, 4HPPD, 4-hydroxyphenylpyruvate dioxygenase

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 55/258 (21%), Positives = 91/258 (35%), Gaps = 47/258 (18%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVI--ELTYNYG 60
            V + VGD  +   +Y    G + + K     EK ++          +FV+    + +  
Sbjct: 5   FVEFYVGDAKQAAYYYFTRFGFEKVAKETGHREKASHV---LRQGQINFVLTAPYSSDSP 61

Query: 61  VDKYDI--GTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIE------ 112
              +    G G       VDD A   E    +G +  + P  +  G   +A I+      
Sbjct: 62  AADFAAKHGDGVKDVAFRVDDAAAAFEAAVERGAEPVQAPVELDEGAVTLATIKGIGDVV 121

Query: 113 ----DPDGYK-------FELLERGPTPEPLCQVMLRV----------GDLDRSINFYEQA 151
               D  GYK       FE L      EP   V L            G ++    FYE+ 
Sbjct: 122 HTLVDRGGYKGSFYPGFFESLLDAALHEPPPGVGLIAIDHLVGNVYRGQMEPWAEFYEKI 181

Query: 152 FGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKG------NAYA---- 201
           FG   +R  D  + +Y+ A+        +  +++  N   +  DK         Y     
Sbjct: 182 FGFREIRSFD-IKTEYS-ALNSIVMASPDGKVKIPLNEPASGKDKSQIEEFLEFYNGAGV 239

Query: 202 -QIAIGTDDVYKTAEAIK 218
             IA+ TDD+ +T  A++
Sbjct: 240 QHIALNTDDIVRTVRALR 257

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PMID:8000039). In some bacterial species, this enzyme has been studied as a hemolysin [Energy metabolism, Amino acids and amines]. Length = 353

>gnl|CDD|176661 cd07237, BphC1-RGP6_C_like, C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

 Score = 39.5 bits (93), Expect = 4e-04
 Identities = 22/103 (21%), Positives = 35/103 (33%), Gaps = 14/103 (13%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKL---LRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY 59
           HVV    D D    FY + LG +L   +     P       FL       H +       
Sbjct: 12  HVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGRH-HSL------- 63

Query: 60  GVDKYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTREPG 99
            + +        H  + V   DDV +  + ++A+G  +    G
Sbjct: 64  ALAEGPGPKRIHHLMLEVTSLDDVGRAYDRVRARGIPIAMTLG 106

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in this subfamily. BphC2-RGP6 and BphC3-RGP6 are one-domain dioxygenases, they belong to a different subfamily of the ED_TypeI_classII_C (C-terminal domain of type I, class II extradiol dioxygenases) family. Length = 154

>gnl|CDD|211354 cd07266, HPCD_N_class_II, N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

 Score = 37.6 bits (88), Expect = 0.001
 Identities = 35/124 (28%), Positives = 49/124 (39%), Gaps = 20/124 (16%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           HV  RV DLDR+ +FY + LG+ +       EE     +L    E  H  + LT      
Sbjct: 7   HVELRVTDLDRSREFYVDLLGLVVT------EEDDGAIYLRGLEEFIHHSLVLT------ 54

Query: 63  KYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTR-EPGPVKG-GNTVIAFIEDPDGY 117
           K       GH G  V   +D+ K     +  G      E G   G G  +   ++DP G+
Sbjct: 55  KAP-EPAVGHLGFRVRSEEDLDKAEAFFQELGLPTRWVEAGEEPGQGRALR--VQDPLGF 111

Query: 118 KFEL 121
             E 
Sbjct: 112 PLEF 115

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a different superfamily. Length = 121

>gnl|CDD|211355 cd08343, ED_TypeI_classII_C, C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

 Score = 36.9 bits (86), Expect = 0.003
 Identities = 34/124 (27%), Positives = 53/124 (42%), Gaps = 16/124 (12%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           HVV R  D+  T  FYT+ LG ++  +   P      A+L    ++ H +        + 
Sbjct: 2   HVVLRTPDVAATRAFYTDVLGFRVSDRVGDPGVLAA-AWL-RCDDEHHDL-------ALF 52

Query: 63  KYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTREPGPVK--GGNTVIAFIEDPDGY 117
               G G  H    V   DD+ +  + + A G  +  E GP +   GN +  +  DPDG 
Sbjct: 53  PGPEGPGLHHVAFEVESLDDIKRAGDRLAANG--IQIEWGPGRHGPGNNLFLYFRDPDGN 110

Query: 118 KFEL 121
           + EL
Sbjct: 111 RIEL 114

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are type I, class II enzymes, and are composed of the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. A catalytically essential metal, Fe(II) or Mn(II), presents in all the enzymes in this family. Length = 131

>gnl|CDD|222152 pfam13468, Glyoxalase_3, Glyoxalase-like domain

 Score = 37.2 bits (87), Expect = 0.003
 Identities = 33/141 (23%), Positives = 48/141 (34%), Gaps = 17/141 (12%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFL----GY----GPEDSHFVIE 54
           H+V  V DLD  +  + + LG  L      P     NA L    GY      +      +
Sbjct: 3   HLVVAVPDLDEAVARFEDRLGFTLTPGGRHPGMGTHNALLYFGDGYLELLAIDPEAPAPD 62

Query: 55  LTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGG--NTVIAFIE 112
               +G+D+   G G   + +  DD+      ++A G           GG     +A   
Sbjct: 63  GGRWFGLDRLAGGPGLSGWALRTDDIDAVAARLRAAGLDFGG-RVRPDGGDLRWRLAVPA 121

Query: 113 DPDGYKFELLERGPTPEPLCQ 133
           D D     L   G  P  L Q
Sbjct: 122 DGD-----LPAGGLLPF-LIQ 136

This domain is related to the Glyoxalase domain pfam00903. Length = 174

>gnl|CDD|176677 cd07254, Glo_EDI_BRP_like_20, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 36.1 bits (84), Expect = 0.004
 Identities = 14/29 (48%), Positives = 18/29 (62%)

Query: 133 QVMLRVGDLDRSINFYEQAFGMELLRKRD 161
            V L V DL+ SI FY + FG+E  + RD
Sbjct: 4   HVALNVDDLEASIAFYSKLFGVEPTKVRD 32

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 120

>gnl|CDD|176702 cd08354, Glo_EDI_BRP_like_13, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 36.1 bits (84), Expect = 0.004
 Identities = 12/26 (46%), Positives = 16/26 (61%)

Query: 136 LRVGDLDRSINFYEQAFGMELLRKRD 161
           L V DL+ +  FYE   G+EL+ K D
Sbjct: 6   LYVDDLEAAEAFYEDVLGLELMLKED 31

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 122

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	262
PLN02300	286	lactoylglutathione lyase	100.0
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	100.0
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	100.0
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	100.0
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	100.0
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.93
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.92
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	99.89
PLN02367	233	lactoylglutathione lyase	99.88
PRK10291	129	glyoxalase I; Provisional	99.87
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.86
PRK10291	129	glyoxalase I; Provisional	99.86
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.85
PLN02367	233	lactoylglutathione lyase	99.85
PLN03042	185	Lactoylglutathione lyase; Provisional	99.84
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.84
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.83
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	99.83
PLN02300	286	lactoylglutathione lyase	99.82
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.82
PLN03042	185	Lactoylglutathione lyase; Provisional	99.82
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.82
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.82
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.82
PRK11478	129	putative lyase; Provisional	99.8
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.8
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.8
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.8
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.8
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.8
PRK11478	129	putative lyase; Provisional	99.79
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.79
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.79
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.78
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.78
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.78
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.78
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.77
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.77
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.77
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.77
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.77
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.76
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.76
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.76
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.76
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.76
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.76
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.75
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.75
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.75
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.75
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.75
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.74
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.74
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.74
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.74
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.74
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.74
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.74
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	99.73
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.73
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.73
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.73
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.73
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.72
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.72
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.72
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.72
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.72
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.72
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.72
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.72
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.72
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.72
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.72
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.72
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.71
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.71
PRK06724	128	hypothetical protein; Provisional	99.71
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.71
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.71
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.71
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.71
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.71
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.71
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.71
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.71
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.71
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.71
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.71
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.7
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.7
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.7
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.7
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.7
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.7
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.7
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.7
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.7
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.69
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.69
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.69
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.69
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.69
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.69
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.69
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.68
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.68
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.68
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.68
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.68
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.68
PRK06724	128	hypothetical protein; Provisional	99.68
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.67
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.67
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.67
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.67
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.66
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.66
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.66
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.66
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.66
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.65
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.65
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.65
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.65
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.65
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.64
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.64
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.64
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.64
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.64
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.64
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.63
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.62
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.62
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.62
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.61
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.61
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.61
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.61
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.6
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.6
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.6
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.59
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.58
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.58
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.58
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.58
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.58
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	99.56
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.55
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.54
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.53
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.52
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.51
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.46
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	99.41
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	99.37
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	99.3
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	99.29
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	99.28
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	99.25
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	99.21
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	99.21
COG3607	133	Predicted lactoylglutathione lyase [General functi	99.2
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	99.18
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.16
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	99.01
COG3607	133	Predicted lactoylglutathione lyase [General functi	98.96
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	98.96
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	98.95
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.94
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	98.83
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	98.8
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	98.79
PRK10148	147	hypothetical protein; Provisional	98.67
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	98.54
PRK10148	147	hypothetical protein; Provisional	98.49
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	98.47
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	98.46
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	98.43
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	98.19
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	97.63
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	96.98
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	96.26
PF15067	236	FAM124: FAM124 family	96.06
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	95.92
PF15067	236	FAM124: FAM124 family	95.71
PRK11700	187	hypothetical protein; Provisional	91.39
cd07268	149	Glo_EDI_BRP_like_4 This conserved domain belongs t	88.62
PF06185	185	YecM: YecM protein; InterPro: IPR010393 This famil	86.72
PF13670	83	PepSY_2: Peptidase propeptide and YPEB domain This	83.32
PF13670	83	PepSY_2: Peptidase propeptide and YPEB domain This	82.06

>PLN02300 lactoylglutathione lyase

Probab=100.00  E-value=4.2e-44  Score=289.77  Aligned_cols=262  Identities=92%  Similarity=1.517  Sum_probs=212.4

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCH
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDV   80 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~   80 (262)
                      |+||+|.|+|++++++||+++|||++..+...+...+...++..++...++.+++....+......+.++.|++|.|+|+
T Consensus        25 l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~~~g~~hia~~v~dv  104 (286)
T PLN02300         25 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFVVELTYNYGVDKYDIGTGFGHFGIAVEDV  104 (286)
T ss_pred             EEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCCCCCceEEEEeccCCCCccccCCCccEEEEEeCCH
Confidence            58999999999999999999999999876544444555677766544455666776543333344566889999999999


Q ss_pred             HHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCCCCCCceeEEeeecChhhhHHHHHHhcCCeeeeec
Q 024779           81 AKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKR  160 (262)
Q Consensus        81 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~~~~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~  160 (262)
                      ++++++++++|+++..+|...+.++.+.+||.||+|+.|||++..+.+.++.|+.|.|+|++++.+||+++|||++....
T Consensus       105 d~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~~~~~~~~~l~~~d~~~a~~Fy~~~lg~~~~~~~  184 (286)
T PLN02300        105 AKTVELVKAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQRGPTPEPLCQVMLRVGDLDRSIKFYEKAFGMKLLRKR  184 (286)
T ss_pred             HHHHHHHHHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeCCCCCCcceeEEEEeCCHHHHHHHHHhccCCEEEeee
Confidence            99999999999999887766665556778999999999999999989999999999999999999999999999997654


Q ss_pred             cCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecCHHHHHHHHHHhCCeeecCCccCCCCcceEEE
Q 024779          161 DNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITA  240 (262)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~  240 (262)
                      ..++..+...++...+......+++....+...+..+++.+|++|.|+|+++++++++++|+++..+|...++..++.++
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~g~~~~~i~~~v~di~~~~~~~~~~G~~v~~~p~~~p~~~~~~~~  264 (286)
T PLN02300        185 DNPEYKYTIAMMGYGPEDKTTVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKTAEAIKLVGGKITREPGPLPGINTKITA  264 (286)
T ss_pred             cccccceEEEEEecCCCCCccEEEEeecCCCCccccCCceeEEEEecCCHHHHHHHHHHcCCeEecCCccCCCCceEEEE
Confidence            44444566666654333334456665544333345578999999999999999999999999999999888865457899


Q ss_pred             EeCCCCcEEEEEeccccccccC
Q 024779          241 CLDPDGWKTVFVDNVDFLKELE  262 (262)
Q Consensus       241 ~~DP~G~~ie~~~~~~~~~~~~  262 (262)
                      ++||+|+.|+|+++.++.|+||
T Consensus       265 ~~DPdG~~i~~~~~~~~~~~~~  286 (286)
T PLN02300        265 CLDPDGWKTVFVDNIDFLKELE  286 (286)
T ss_pred             EECCCCCEEEEEccchhhhhcC
Confidence            9999999999999999999997

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=100.00  E-value=3.5e-33  Score=228.55  Aligned_cols=232  Identities=20%  Similarity=0.240  Sum_probs=164.7

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeC--
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD--   78 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~--   78 (262)
                      |+||.|.|+|++++++||+++|||++..+..      ..+++.......+..+.+...       ...++.|++|.|+  
T Consensus         5 i~Hi~l~V~Dle~s~~FY~~~LG~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~-------~~~g~~hiaf~v~~~   71 (303)
T TIGR03211         5 LGHVELRVLDLEESLKHYTDVLGLEETGRDG------QRVYLKAWDEWDHYSVILTEA-------DTAGLDHMAFKVESE   71 (303)
T ss_pred             eeEEEEEeCCHHHHHHHHHHhcCCEEeeecC------ceEEEEeccccccceEeeccC-------CCCceeEEEEEeCCH
Confidence            5899999999999999999999999876542      123443221111223333221       1346889999998  


Q ss_pred             -CHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCCC---------------------CCCceeEEe
Q 024779           79 -DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT---------------------PEPLCQVML  136 (262)
Q Consensus        79 -d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~~---------------------~~~~~~v~l  136 (262)
                       |+++++++|+++|+++...+.....+.++.++|.||+|+.|||++....                     ..+++||+|
T Consensus        72 ~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Hi~l  151 (303)
T TIGR03211        72 ADLERLVKRLEAYGVGTGWIPAGELPGVGRRVRFTLPSGHTMELYAEKEYVGELVGGLNPDPWPDPLRGVGARRLDHCLL  151 (303)
T ss_pred             HHHHHHHHHHHHcCCCeeeccCCCCCCcceEEEEECCCCCEEEEEEccccccccccccCCcccccccCCcCceeEEEEeE
Confidence             6889999999999998755432222345779999999999999974421                     236899999


Q ss_pred             eecChhhhHHHHHHhcCCeeeeeccCcCccc-eeeeeccCCCCcceEEEEeeecCCcccccCCc-eeEEEEEecC---HH
Q 024779          137 RVGDLDRSINFYEQAFGMELLRKRDNPEYKY-TIAMMGYGPEDKNVVLELTYNYGVTDYDKGNA-YAQIAIGTDD---VY  211 (262)
Q Consensus       137 ~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~i~~~v~d---l~  211 (262)
                      .|+|++++++||+++|||++......+++.. ...++....  ....+.+..       ..+++ ..|++|.|+|   ++
T Consensus       152 ~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-------~~~~g~~~Hiaf~v~~~~~v~  222 (303)
T TIGR03211       152 YGEDVAENTRFFTEVLGFRLTEQVVLGDGKEQAAAWLSVSN--KAHDIAFVG-------DPEPGKLHHVSFFLDSWEDVL  222 (303)
T ss_pred             EeCCHHHHHHHHHHhcCCEEEeeEEcCCCcEEEEEEEEcCC--CCcccceec-------CCCCCceEEEEEEcCCHHHHH
Confidence            9999999999999999999876543333221 233444321  222232221       11234 8999999986   55


Q ss_pred             HHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEec
Q 024779          212 KTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDN  254 (262)
Q Consensus       212 ~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  254 (262)
                      ++.++|+++|+++..+|..++.+.++++|++||+||.|||...
T Consensus       223 ~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  265 (303)
T TIGR03211       223 KAADVMSKNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFGG  265 (303)
T ss_pred             HHHHHHHhCCCceeeCCcccCCCCceEEEEECCCCCEEEEecC
Confidence            5778999999999888876654445789999999999999844

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=100.00  E-value=1.2e-32  Score=224.62  Aligned_cols=231  Identities=24%  Similarity=0.313  Sum_probs=165.7

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeC--
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD--   78 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~--   78 (262)
                      |+||.|.|+|++++++||+++|||++..+..      ..+++..........+.+...       ...++.|++|.|+  
T Consensus         5 i~hv~l~v~Dl~~s~~FY~~vLGl~~~~~~~------~~~~~~~~~~~~~~~l~l~~~-------~~~~~~hiaf~v~~~   71 (294)
T TIGR02295         5 TGHVELRVTDLDKSREFYVDLLGFRETESDK------EYIYLRGIEEFQHHSLVLTKA-------PSAALSYIGFRVSKE   71 (294)
T ss_pred             eeEEEEEeCCHHHHHHHHHHccCCEEEEecC------CeEEEeccCcCCceEEEeeeC-------CCcCccEEEEEeCCH
Confidence            5899999999999999999999999876532      234443222111222333221       1246789999997  


Q ss_pred             -CHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCC---------------CCCCceeEEeeecChh
Q 024779           79 -DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP---------------TPEPLCQVMLRVGDLD  142 (262)
Q Consensus        79 -d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~---------------~~~~~~~v~l~v~d~~  142 (262)
                       |+++++++|+++|+++...+.  . +..+.++|.||+||.|||+....               .+.+++|++|.|+|++
T Consensus        72 ~dl~~~~~~l~~~Gv~v~~~~~--~-~~~~~~~~~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~~i~Hv~l~v~dl~  148 (294)
T TIGR02295        72 EDLDKAADFFQKLGHPVRLVRD--G-GQPEALRVEDPFGYPIEFYFEMEKVERLLRRYHRHRGVSPVRLDHFNVFVPDVQ  148 (294)
T ss_pred             HHHHHHHHHHHhcCCcEEeecC--C-CCceEEEEECCCCCEEEEEEchhhcccccccccccCCccceeeeeEEEEeCCHH
Confidence             689999999999998875432  2 24588999999999999996321               1247899999999999


Q ss_pred             hhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecC---HHHHHHHHHH
Q 024779          143 RSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDD---VYKTAEAIKL  219 (262)
Q Consensus       143 ~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~d---l~~~~~~l~~  219 (262)
                      ++++||+++|||++......+.+.....++...  ..++.+.+..       ..++++.|++|.|+|   ++++.++|++
T Consensus       149 ~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-------~~~~~~~Hiaf~v~d~~~v~~~~~~l~~  219 (294)
T TIGR02295       149 RALRFYKEELGFRVTEYTEDDEGNLAAAWLHRK--GGVHDIALTN-------GNGPRLHHIAYWVHDPLNIIKACDILAS  219 (294)
T ss_pred             HHHHHHHHhcCCEEEEEeccCCCcEEEEEEecC--CCcCceEeec-------CCCCceeeEEEEcCCHHHHHHHHHHHHh
Confidence            999999999999987654333332223444322  1233344321       124689999999998   5556899999


Q ss_pred             hCCe--eecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          220 FGGK--VTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       220 ~g~~--~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                      +|++  +...|..+..+..+++|++||+||.|||+..+.
T Consensus       220 ~G~~~~~~~~p~~~~~~~~~~~y~~DP~G~~iEl~~~~~  258 (294)
T TIGR02295       220 AGLSDSIERGPGRHGVSNAFFLYLRDPDGHRIELYTGDY  258 (294)
T ss_pred             CCCCcccccCCccCCCCcceEEEEECCCCCEEEEEeccc
Confidence            9998  666676655544578999999999999988654

The enzyme from Bacillus brevis contains manganese.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=100.00  E-value=4.7e-32  Score=219.99  Aligned_cols=233  Identities=18%  Similarity=0.224  Sum_probs=167.3

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCC-
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD-   79 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d-   79 (262)
                      |+||+|.|+|+++|++||+++|||++..+..  .   ...|+..+...  ..+.+....       ..++.+++|.|+| 
T Consensus         4 i~~v~l~V~Dl~~s~~FY~~~LGl~~~~~~~--~---~~~~~~~~~~~--~~~~l~~~~-------~~~~~~~~f~V~~~   69 (286)
T TIGR03213         4 LGYLGIGVSDVDAWREFATEVLGMMVASEGE--N---DALYLRLDSRA--HRIAVHPGE-------SDDLAYAGWEVADE   69 (286)
T ss_pred             eeEEEEEeCCHHHHHHHHHhccCcccccCCC--C---ceEEEEcCCCc--eEEEEEECC-------cCCeeeEeeeeCCH
Confidence            5899999999999999999999998764321  1   23355554322  223333221       1356789999998 


Q ss_pred             --HHHHHHHHHHcCCeeecCCcc--cCCCCeEEEEEECCCCCEEEEEEcCC----C--------------CCCceeEEee
Q 024779           80 --VAKTVELIKAKGGKVTREPGP--VKGGNTVIAFIEDPDGYKFELLERGP----T--------------PEPLCQVMLR  137 (262)
Q Consensus        80 --~~~~~~~l~~~G~~~~~~~~~--~~~~~~~~~~~~DP~G~~iel~~~~~----~--------------~~~~~~v~l~  137 (262)
                        ++++.++|+++|+++...+..  ...+....++|.|||||.+|++....    .              +.+++||.|.
T Consensus        70 ~~l~~~~~~L~~~Gv~~~~~~~~~~~~~~~~~~~~f~DPdGn~lEl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Hv~l~  149 (286)
T TIGR03213        70 AGLDQVKEKLEKAGVAVTVASAAEARERGVLGLIKFTDPGGNPLEIYYGAVEDFEKPFVSPRAVSGFVTGDQGLGHIVLR  149 (286)
T ss_pred             HHHHHHHHHHHHcCCceEECCHHHhhhccceEEEEEECCCCCEEEEEEcccccCCCCCCCCCCCCccccCCccccEEEEE
Confidence              889999999999988755431  12245678999999999999995321    0              2378999999


Q ss_pred             ecChhhhHHHHHHhcCCeeeeeccC--cCc-cceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecCHHH--
Q 024779          138 VGDLDRSINFYEQAFGMELLRKRDN--PEY-KYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYK--  212 (262)
Q Consensus       138 v~d~~~~~~FY~~~lG~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~dl~~--  212 (262)
                      |+|++++.+||+++|||++......  +++ .....++...+  .++.+.+..      .+..+++.|++|.|+|+++  
T Consensus       150 v~Dle~s~~FY~~~LGf~~~~~~~~~~~~g~~~~~~~l~~~~--~~~~~~l~~------~~~~~~~~Hiaf~v~d~~~v~  221 (286)
T TIGR03213       150 VPDVDAALAFYTEVLGFQLSDVIDLPAGPGVTVRPYFLHCNE--RHHSLAFAA------GPSEKRLNHLMLEVDTLDDVG  221 (286)
T ss_pred             cCCHHHHHHHHHHccCCeEEEeEcccCCCCCcceEEEEEECC--CcceEEEec------CCCCCceEEEEEEcCCHHHHH
Confidence            9999999999999999998765322  111 11234554432  344455432      1234689999999987766  


Q ss_pred             -HHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          213 -TAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       213 -~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                       +.++|+++|+ ....|.+++.+..+++|++||+|+.||+.....
T Consensus       222 ~~~~~l~~~G~-~~~~~~r~~~~~~~~~y~~DP~G~~iE~~~~~~  265 (286)
T TIGR03213       222 LALDRVDADGI-VASTLGRHTNDHMVSFYVATPSGWLVEYGWGAR  265 (286)
T ss_pred             HHHHHHHHCCC-EEecCCcCCCCCeEEEEEECCCCcEEEeecCcE
Confidence             7999999999 566666666555688999999999999987543

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=100.00  E-value=5e-32  Score=200.37  Aligned_cols=246  Identities=53%  Similarity=0.880  Sum_probs=204.7

Q ss_pred             ceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCC-----------CcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCc
Q 024779            2 LHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPE-----------EKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGF   70 (262)
Q Consensus         2 ~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   70 (262)
                      -|+.+.|.|..+++.||+++|||++...++.+.           +.+..+++++|+...||++++..+++...+..|+++
T Consensus        19 LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViELTYNYgV~~YelGndf   98 (299)
T KOG2943|consen   19 LHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIELTYNYGVSKYELGNDF   98 (299)
T ss_pred             eeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEEEeccCccceeccCCc
Confidence            499999999999999999999999987766655           577888999999999999999999999999999999


Q ss_pred             eeEEEEeCCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCCCCCCceeEEeeecChhhhHHHHHH
Q 024779           71 GHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRSINFYEQ  150 (262)
Q Consensus        71 ~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~~~~~~~~v~l~v~d~~~~~~FY~~  150 (262)
                      .||.+.++|+-...+.+...|.+         .++...+++.||||..+++++..+.+..+..|.|+|.|+++++.||.+
T Consensus        99 g~i~I~s~dv~~~ve~v~~p~~~---------~~g~~~~~v~dPdGykF~l~~~~p~s~pv~~V~l~VgdL~ks~kyw~~  169 (299)
T KOG2943|consen   99 GGITIASDDVFSKVEKVNAPGGK---------GSGCGIAFVKDPDGYKFYLIDRGPQSDPVLQVMLNVGDLQKSIKYWEK  169 (299)
T ss_pred             ccEEEeHHHHHHHHHHhcCcCCc---------ccceEEEEEECCCCcEEEEeccCCCCCCeEEEEEEehhHHHHHHHHHH
Confidence            99999999988877777665532         135566888999999999999999999999999999999999999999


Q ss_pred             hcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecCHHHHHHHHHHhCCeeecCCcc
Q 024779          151 AFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGP  230 (262)
Q Consensus       151 ~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~dl~~~~~~l~~~g~~~~~~~~~  230 (262)
                      .|||++.+.    +..+...+++++.  .+..++|...++......+.+...+++..+++..+-+.++..+.++..+-.+
T Consensus       170 ~lgM~ilek----eek~t~~~mgYgd--~q~~LElt~~~~~id~~kg~griafaip~d~~~~l~e~iK~~n~~i~~~ltt  243 (299)
T KOG2943|consen  170 LLGMKILEK----EEKYTRARMGYGD--EQCVLELTYNYDVIDRAKGFGRIAFAIPTDDLPKLQEAIKSANGTILTPLTT  243 (299)
T ss_pred             HhCcchhhh----hhhhhhhhhccCC--cceEEEEEeccCcccccccceeEEEeccccccccHHHHHHHhccccccceee
Confidence            999999875    2345667788765  4699999988776555555565666666789999999999998777665443


Q ss_pred             C--CCCc-ceEEEEeCCCCcEEEEEeccccccccC
Q 024779          231 L--PGIN-TKITACLDPDGWKTVFVDNVDFLKELE  262 (262)
Q Consensus       231 ~--~~~~-~~~~~~~DP~G~~ie~~~~~~~~~~~~  262 (262)
                      .  |++. ..++.+.||||+.|+|+.++.+++.++
T Consensus       244 l~tPgka~vqvvil~DPDgheicfVdde~F~~lsk  278 (299)
T KOG2943|consen  244 LDTPGKATVQVVILADPDGHEICFVDDEGFRKLSK  278 (299)
T ss_pred             ccCCCcceeEEEEEECCCCceEEEeccHHHHHHhc
Confidence            3  3332 356788999999999999999988764

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.93  E-value=8.6e-24  Score=175.81  Aligned_cols=221  Identities=23%  Similarity=0.338  Sum_probs=148.9

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCC------CCCCCCceeEE
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDK------YDIGTGFGHFG   74 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~------~~~~~~~~~i~   74 (262)
                      ++||.|.|+|++++.+||++.|||++........+ .....+..+  .  ..+++..+.....      ...+.++.|++
T Consensus         3 i~hi~~~V~D~~~a~~~y~~~LGf~~~~~~~~~~~-~~~~~~~~G--~--~~l~L~~~~~~~s~~~~~~~~hg~gv~~ia   77 (353)
T TIGR01263         3 FDFVEFYVGDAKQAAYYYFTRFGFEKVAKETGHRE-KASHVLRQG--Q--INFVLTAPYSSDSPAADFAAKHGDGVKDVA   77 (353)
T ss_pred             eEEEEEEeCCHHHHHHHHHHhcCCcEEEEeecCCc-eeEEEEEeC--C--EEEEEecCCCCCchHHHHHHhCCCceEEEE
Confidence            58999999999999999999999999876321121 122233322  2  3455554322111      12578999999


Q ss_pred             EEeCCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCC---------------------C----CC
Q 024779           75 IAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP---------------------T----PE  129 (262)
Q Consensus        75 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~---------------------~----~~  129 (262)
                      |.|+|++++++++.++|+++..+|.....|......+..++|..+-|++...                     .    -.
T Consensus        78 f~V~Dv~~a~~~l~~~Ga~~v~~p~~~~~g~~~~~~i~~~g~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (353)
T TIGR01263        78 FRVDDAAAAFEAAVERGAEPVQAPVELDEGAVTLATIKGIGDVVHTLVDRGGYKGSFYPGFFESLLDAALHEPPPGVGLI  157 (353)
T ss_pred             EEECCHHHHHHHHHHCCCEeccCCccCCCCeEEEEEEECcCCCEEEEEcCCCCCCCCCCCccccccccccccCCCCCCeE
Confidence            9999999999999999999987765431122233333444455554443210                     0    12


Q ss_pred             CceeEEeeec--ChhhhHHHHHHhcCCeeeeeccCcCc--cceeeeeccCCCCcceEEEEeeecCC---c------cccc
Q 024779          130 PLCQVMLRVG--DLDRSINFYEQAFGMELLRKRDNPEY--KYTIAMMGYGPEDKNVVLELTYNYGV---T------DYDK  196 (262)
Q Consensus       130 ~~~~v~l~v~--d~~~~~~FY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~---~------~~~~  196 (262)
                      +++||+++|+  |+++++.||+++|||++....+....  ......+.  ...+...++|.+....   .      ....
T Consensus       158 ~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~~~~~~~s~~~~--~~~g~~~i~L~ep~~~~~~s~i~~fl~~~~  235 (353)
T TIGR01263       158 AIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDIKTEYSALNSIVMA--SPDGKVKIPLNEPASGKDKSQIEEFLEFYN  235 (353)
T ss_pred             EeeeeEcccCCccHHHHHHHHHHHhCCceeeEEEeccCCccEEEEEEE--CCCCcEEEEEeccCCCCCCCHHHHHHHHcC
Confidence            5999999999  99999999999999998765443221  11111122  1224577888763211   1      1224


Q ss_pred             CCceeEEEEEecCHHHHHHHHHHhCCeeecCC
Q 024779          197 GNAYAQIAIGTDDVYKTAEAIKLFGGKVTREP  228 (262)
Q Consensus       197 ~~~~~~i~~~v~dl~~~~~~l~~~g~~~~~~~  228 (262)
                      ++|+.||||.|+|+++++++|+++|++++..|
T Consensus       236 g~Gv~HiAf~vdDi~~~~~~l~~~Gv~~l~~P  267 (353)
T TIGR01263       236 GAGVQHIALNTDDIVRTVRALRARGVEFLDTP  267 (353)
T ss_pred             CCCccEEEEEcCCHHHHHHHHHHcCCccCcCC
Confidence            78999999999999999999999999999877

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.92  E-value=1.8e-23  Score=159.66  Aligned_cols=190  Identities=23%  Similarity=0.341  Sum_probs=139.7

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCC-CCCCCCCCCceeEEEEeCC
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG-VDKYDIGTGFGHFGIAVDD   79 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~i~~~v~d   79 (262)
                      ++.|.|.|+|++.+..||++++|+++..+..      ....+..+..   ..+.+.+... ..+.....|+.|++|.+++
T Consensus        11 v~~v~L~vrdL~~~~~FY~~ilGL~v~~~~~------~~v~L~vgg~---~LL~L~q~~~a~~~~~~~aGLyH~AfLlP~   81 (265)
T COG2514          11 VGAVTLNVRDLDSMTSFYQEILGLQVLEETD------GSVTLGVGGT---PLLTLEQFPDARRPPPRAAGLYHTAFLLPT   81 (265)
T ss_pred             EEEEEEEeccHHHHHHHHHHhhCCeeeeccC------ceEEEeeCCE---EEEEEEeCCCCCCCCccccceeeeeeecCC
Confidence            3578999999999999999999999998764      3455666543   2345544322 2333567799999999995


Q ss_pred             ---HHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCCC-----------------------------
Q 024779           80 ---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT-----------------------------  127 (262)
Q Consensus        80 ---~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~~-----------------------------  127 (262)
                         +.++..++.+.|..+..   ..+...+..+||.||+||.||++..++.                             
T Consensus        82 r~~L~~~l~hl~~~~~~l~G---a~DH~vSEAlYl~DPEGNGIEiYaDrp~~~W~~~~~~v~m~t~~ld~~~ll~~~~~~  158 (265)
T COG2514          82 REDLARVLNHLAEEGIPLVG---ASDHLVSEALYLEDPEGNGIEIYADRPRSTWDWQNDQVKMDTEPLDVEALLEEATKE  158 (265)
T ss_pred             HHHHHHHHHHHHhcCCcccc---cCcchhheeeeecCCCCCeEEEEecCChHHhcccCCeeeecccccCHHHHhhhcccc
Confidence               77888999999988752   3444578899999999999999966431                             


Q ss_pred             -------CCCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccc---cC
Q 024779          128 -------PEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYD---KG  197 (262)
Q Consensus       128 -------~~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~  197 (262)
                             ...|+||.|.|.|++++.+||.++|||++..+.  +    ...|++.+  +-++.+....+.......   ..
T Consensus       159 ~~~g~p~~t~IGHvHL~v~~l~eA~~fY~~~LG~~~~~~~--~----~A~F~a~G--~YHHHia~N~W~s~~~~~~~~~~  230 (265)
T COG2514         159 PWTGLPAGTIIGHVHLKVADLEEAEQFYEDVLGLEVTARG--P----SALFLASG--DYHHHLAANTWNSRGARPRNANA  230 (265)
T ss_pred             ccccCCCCcEEeEEEEEeCCHHHHHHHHHHhcCCeeeecC--C----cceEEecC--CcceeEEEeccccCCCCCCCCCC
Confidence                   126899999999999999999999999998762  1    23566654  367777777654332211   23


Q ss_pred             CceeEEEEEecCH
Q 024779          198 NAYAQIAIGTDDV  210 (262)
Q Consensus       198 ~~~~~i~~~v~dl  210 (262)
                      .|...+.+.+.+.
T Consensus       231 ~GLa~~~i~~~~~  243 (265)
T COG2514         231 SGLAWLEIHTPDP  243 (265)
T ss_pred             CCcceEEEEcCCc
Confidence            4777777777663

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=99.89  E-value=7e-21  Score=157.05  Aligned_cols=222  Identities=20%  Similarity=0.286  Sum_probs=156.2

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCc--ceeeEeeecCCCceeEEEeeecCCC-----------------
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEK--YTNAFLGYGPEDSHFVIELTYNYGV-----------------   61 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~-----------------   61 (262)
                      ++||.+.|.|..++..||+..|||+.+.......+.  .....++  .....+  .+..+...                 
T Consensus         1 ~dhvef~v~da~~~~~~f~~~~GF~~~a~~~~~tg~~~~~s~~~r--~g~i~f--v~~~~~~~~~~~~~~~~~~~~~~~~   76 (398)
T PLN02875          1 FHHVEFWCGDATNTARRFSWGLGMPLVAKSDLTTGNTTYASYLLR--SGDLVF--LFTAPYSPKIGAGDDDPASTAPHPS   76 (398)
T ss_pred             CeEEEEEcCCHHHHHHHHHHhcCCCeEeecCCCCCCcceEEEEEE--eCCEEE--EEeCCCCCccccccccccccccccc
Confidence            689999999999999999999999998765432222  2222333  333333  33322101                 


Q ss_pred             --CC------CCCCCCceeEEEEeCCHHHHHHHHHHcCCeeecCCcccCC----CCeEEEEEECCCCCEEEEEEcCC---
Q 024779           62 --DK------YDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKG----GNTVIAFIEDPDGYKFELLERGP---  126 (262)
Q Consensus        62 --~~------~~~~~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~----~~~~~~~~~DP~G~~iel~~~~~---  126 (262)
                        ..      ..+|.++..|+|+|+|++++++++.++|+++..+|....+    |......+..++|..+-|++...   
T Consensus        77 ~~~~~a~~~~~~HG~gV~dvaf~V~Da~~a~~~A~~~Ga~~~~~~~~~~d~~~~g~~~~~~I~~~G~~~h~lVdr~~~~~  156 (398)
T PLN02875         77 FSSDAARRFFAKHGLAVRAVGVLVEDAEEAFRTSVAHGARPVLEPTELGDEASGGKAVIAEVELYGDVVLRYVSYKGFDG  156 (398)
T ss_pred             cCcHHHHHHHHHcCCeeeEEEEEECCHHHHHHHHHHCCCeeccCCccccccccCceEEEEEEEccCCcEEEEEccCCCCC
Confidence              00      0156899999999999999999999999998877765432    22455556677777777775321   


Q ss_pred             ------------C--------CCCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCc-----cceeeeeccCCCCcce
Q 024779          127 ------------T--------PEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEY-----KYTIAMMGYGPEDKNV  181 (262)
Q Consensus       127 ------------~--------~~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~  181 (262)
                                  .        -.+|+||+++|+++++++.||+++|||+.....+.++.     +.....+.  ++++..
T Consensus       157 ~~f~p~f~~~~~~~~~~~~~gl~~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~--sp~g~v  234 (398)
T PLN02875        157 AKFLPGYEPVESSSSFPLDYGLRRLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLA--SNNEMV  234 (398)
T ss_pred             CccCCCcccccccccCCCCCCcceeCcceechhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEE--cCCCcE
Confidence                        0        12699999999999999999999999988865443322     12333333  233557


Q ss_pred             EEEEeeecCC----cc------cccCCceeEEEEEecCHHHHHHHHHHh----CCeeecCC
Q 024779          182 VLELTYNYGV----TD------YDKGNAYAQIAIGTDDVYKTAEAIKLF----GGKVTREP  228 (262)
Q Consensus       182 ~~~l~~~~~~----~~------~~~~~~~~~i~~~v~dl~~~~~~l~~~----g~~~~~~~  228 (262)
                      .+.|.+....    ..      ...|+|++||||.|+||.+++++|+++    |++++..|
T Consensus       235 ~ipLnEP~~~~~~~SqI~eFL~~~~G~GIQHIAl~tdDI~~av~~Lra~~~~~Gv~fL~~P  295 (398)
T PLN02875        235 LLPLNEPTFGTKRKSQIQTYLEHNEGPGLQHLALKSDDIFGTLREMRARSHIGGFEFMPPP  295 (398)
T ss_pred             EEEeccCCCCCCCcChHHHHHHhcCCCCeeEEEeecCCHHHHHHHHHhccccCCeecCCCC
Confidence            8888875321    11      234689999999999999999999999    99999855

>PLN02367 lactoylglutathione lyase

Probab=99.88  E-value=3e-21  Score=147.41  Aligned_cols=128  Identities=32%  Similarity=0.564  Sum_probs=105.0

Q ss_pred             CceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCC---------------CcceEEEEeeecCCcc-
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPE---------------DKNVVLELTYNYGVTD-  193 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~l~~~~~~~~-  193 (262)
                      .+.|+.|.|+|++++++||+++|||++..+.+.++..+.+.++++...               .....++|...++... 
T Consensus        75 ~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n~g~e~~  154 (233)
T PLN02367         75 IMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWGTESD  154 (233)
T ss_pred             EEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEecCCCCCcc
Confidence            689999999999999999999999999988888887888888865331               1245899987665431 


Q ss_pred             -----cccC----CceeEEEEEecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecccccc
Q 024779          194 -----YDKG----NAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDFLK  259 (262)
Q Consensus       194 -----~~~~----~~~~~i~~~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~~~  259 (262)
                           +..+    .|+.||+|.|+|+++++++|+++|+++...|....+  .++++++||||++|||+|.+...+
T Consensus       155 ~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL~a~Gv~~v~~P~~g~~--~riaFIkDPDGn~IEL~e~~~~~~  227 (233)
T PLN02367        155 PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPNDGKM--KGIAFIKDPDGYWIEIFDLKTIGT  227 (233)
T ss_pred             ccchhcccCCCCCCCceEEEEEcCCHHHHHHHHHHCCCEEEeCCccCCc--eEEEEEECCCCCEEEEEecccccc
Confidence                 2222    489999999999999999999999999987754333  478999999999999999887654

>PRK10291 glyoxalase I; Provisional

Probab=99.87  E-value=5e-21  Score=137.09  Aligned_cols=122  Identities=52%  Similarity=0.949  Sum_probs=94.7

Q ss_pred             EeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecCHHHHH
Q 024779          135 MLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTA  214 (262)
Q Consensus       135 ~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~dl~~~~  214 (262)
                      +|.|+|++++++||+++|||++......++..+.+.++..++......+++....+..+...+.+..|++|.|+|+++++
T Consensus         1 ~l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~hlaf~V~d~~~~~   80 (129)
T PRK10291          1 MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEAC   80 (129)
T ss_pred             CEEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCCCcceEEeeecCCCCCCcCCCCeeEEEEEeCCHHHHH
Confidence            37899999999999999999987765555555566777654433345566654433333445568899999999999999


Q ss_pred             HHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          215 EAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       215 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                      ++|+++|+++..++...+++..+++++.||||+.|||++.++
T Consensus        81 ~~l~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~~  122 (129)
T PRK10291         81 EKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD  122 (129)
T ss_pred             HHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEccc
Confidence            999999999998776666654567889999999999999775

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.86  E-value=1.8e-20  Score=137.66  Aligned_cols=134  Identities=48%  Similarity=0.856  Sum_probs=100.5

Q ss_pred             CCCCCCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEE
Q 024779          125 GPTPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIA  204 (262)
Q Consensus       125 ~~~~~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~  204 (262)
                      .....++.|+.|.|+|++++.+||+++|||++......+...+...++..+.......+.+.......+...+.+..|++
T Consensus        12 ~~~~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~hi~   91 (150)
T TIGR00068        12 KTKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWGTEKYDLGNGFGHIA   91 (150)
T ss_pred             ccCCceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCCCccEEEEeecCCCCcccCCCceeEEE
Confidence            34567899999999999999999999999998765444443344455554332234455554433322333456889999


Q ss_pred             EEecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccccc
Q 024779          205 IGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDFL  258 (262)
Q Consensus       205 ~~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~~  258 (262)
                      |.|+|+++++++|.++|+++..+|...+++..+++|++||+|+.|||++...-.
T Consensus        92 f~v~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  145 (150)
T TIGR00068        92 IGVDDVYKACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRKSTK  145 (150)
T ss_pred             EecCCHHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEECCchh
Confidence            999999999999999999998887666665557889999999999999977543

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>PRK10291 glyoxalase I; Provisional

Probab=99.86  E-value=5e-20  Score=131.89  Aligned_cols=126  Identities=60%  Similarity=1.059  Sum_probs=94.1

Q ss_pred             EEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCHHHHH
Q 024779            5 VYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTV   84 (262)
Q Consensus         5 ~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~~~~~   84 (262)
                      +|.|+|+++|++||+++|||++..+...+...+..+++..++......+++....+..+...+.++.|++|.|+|+++++
T Consensus         1 ~l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~hlaf~V~d~~~~~   80 (129)
T PRK10291          1 MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEAC   80 (129)
T ss_pred             CEEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCCCcceEEeeecCCCCCCcCCCCeeEEEEEeCCHHHHH
Confidence            47899999999999999999988765444445566676654433333455554333333345568899999999999999


Q ss_pred             HHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCCCCCC
Q 024779           85 ELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEP  130 (262)
Q Consensus        85 ~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~~~~~  130 (262)
                      ++|+++|+++..++.+..++..+.++|.||||+.|||++....+.+
T Consensus        81 ~~l~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~~~~~~  126 (129)
T PRK10291         81 EKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGRG  126 (129)
T ss_pred             HHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEccccccc
Confidence            9999999998876655555555678889999999999997754443

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.85  E-value=7.6e-20  Score=134.35  Aligned_cols=130  Identities=65%  Similarity=1.106  Sum_probs=96.7

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCH
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDV   80 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~   80 (262)
                      |+||.|.|+|++++.+||+++|||++..+...+...+..+++..+.......+++.......+...+.++.|++|.|+|+
T Consensus        18 i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~hi~f~v~dl   97 (150)
T TIGR00068        18 LLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWGTEKYDLGNGFGHIAIGVDDV   97 (150)
T ss_pred             EEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCCCccEEEEeecCCCCcccCCCceeEEEEecCCH
Confidence            58999999999999999999999998766543333344556655443333445554332222333456888999999999


Q ss_pred             HHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCCCCCC
Q 024779           81 AKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEP  130 (262)
Q Consensus        81 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~~~~~  130 (262)
                      ++++++|.++|+++..++.+.+.+..+.+||.||+|+.|||++..+....
T Consensus        98 d~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~  147 (150)
T TIGR00068        98 YKACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRKSTKDG  147 (150)
T ss_pred             HHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEECCchhhh
Confidence            99999999999998877755555556788899999999999988765443

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>PLN02367 lactoylglutathione lyase

Probab=99.85  E-value=8.8e-20  Score=139.38  Aligned_cols=125  Identities=41%  Similarity=0.731  Sum_probs=98.8

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCC---------------ceeEEEeeecCCCCC--
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPED---------------SHFVIELTYNYGVDK--   63 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~l~~~~~~~~~~--   63 (262)
                      ++|++|.|+|++++++||+++|||++..+.+.+..++..+++..++..               ....+||.++.+...  
T Consensus        76 ~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n~g~e~~~  155 (233)
T PLN02367         76 MQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWGTESDP  155 (233)
T ss_pred             EEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEecCCCCCccc
Confidence            589999999999999999999999999988777777888888643310               123678876544321  


Q ss_pred             ----CCCC----CCceeEEEEeCCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCCC
Q 024779           64 ----YDIG----TGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  127 (262)
Q Consensus        64 ----~~~~----~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~~  127 (262)
                          +..+    .|+.||||.|+|+++++++|+++|+++..+|....  ..+.+++.||||+.|||++...-
T Consensus       156 ~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL~a~Gv~~v~~P~~g~--~~riaFIkDPDGn~IEL~e~~~~  225 (233)
T PLN02367        156 DFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPNDGK--MKGIAFIKDPDGYWIEIFDLKTI  225 (233)
T ss_pred             cchhcccCCCCCCCceEEEEEcCCHHHHHHHHHHCCCEEEeCCccCC--ceEEEEEECCCCCEEEEEecccc
Confidence                2222    48999999999999999999999999987765433  35678899999999999987543

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.84  E-value=8.9e-20  Score=136.73  Aligned_cols=127  Identities=30%  Similarity=0.560  Sum_probs=98.2

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCC---------------cceEEEEeeecCCcc
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPED---------------KNVVLELTYNYGVTD  193 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~l~~~~~~~~  193 (262)
                      -.+.|+.|.|+|++++++||+++|||++..+...++..+.+.++......               ....++|........
T Consensus        26 ~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL~~~~~~~~  105 (185)
T PLN03042         26 YIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNWGTES  105 (185)
T ss_pred             cEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcchhhcccccccCCCEEEEEEcCCCcc
Confidence            37899999999999999999999999998776666666777777543210               235788886443221


Q ss_pred             ------cc----cCCceeEEEEEecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecccc
Q 024779          194 ------YD----KGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDF  257 (262)
Q Consensus       194 ------~~----~~~~~~~i~~~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~  257 (262)
                            +.    .+.|+.||+|.|+|+++++++|+++|+.+...|....+  .++++++||||++|||++.+..
T Consensus       106 ~p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L~~~Gv~v~~~p~~~~~--~~~~fi~DPdG~~IEl~e~~~~  177 (185)
T PLN03042        106 DPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKPDDGKM--KGLAFIKDPDGYWIEIFDLKRI  177 (185)
T ss_pred             cccccccccCCCCCCCccEEEEEcCCHHHHHHHHHHCCCeEEeCCccCCc--eeEEEEECCCCCEEEEEECCCc
Confidence                  11    12589999999999999999999999999876643222  4678899999999999997763

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.84  E-value=9.1e-20  Score=131.67  Aligned_cols=123  Identities=18%  Similarity=0.224  Sum_probs=93.7

Q ss_pred             ceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcc------cccCCceeEEE
Q 024779          131 LCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD------YDKGNAYAQIA  204 (262)
Q Consensus       131 ~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~------~~~~~~~~~i~  204 (262)
                      ++|+.|.|+|++++++||+++|||++......++  ....++..    +...+.+........      ...+++..|++
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~~--~~~~~~~~----g~~~l~l~~~~~~~~~~~~~~~~~~~g~~hia   74 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSED--KASYLLRQ----GDINFVLNSPLNSFAPVADFLEKHGDGVCDVA   74 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCCc--eEEEEEEc----CCEEEEEecCCCCCCchHHHHHhcCCceEEEE
Confidence            5899999999999999999999999987644321  22233331    234555554222111      12456889999


Q ss_pred             EEecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccccccc
Q 024779          205 IGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDFLKE  260 (262)
Q Consensus       205 ~~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~~~~  260 (262)
                      |.|+|+++++++|+++|++++.+|...+++ .+.++++||+|+.|+|+|++.+.+.
T Consensus        75 ~~V~Dvda~~~~l~~~G~~v~~~p~~~~~~-~~~~~i~dp~G~~ie~~~~~~~~~~  129 (136)
T cd08342          75 FRVDDAAAAYERAVARGAKPVQEPVEEPGE-LKIAAIKGYGDSLHTLVDRKGYKGP  129 (136)
T ss_pred             EEeCCHHHHHHHHHHcCCeEccCceecCCe-EEEEEEeccCCcEEEEEecCCCCCc
Confidence            999999999999999999999998775654 4899999999999999999887544

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.83  E-value=2.9e-19  Score=126.36  Aligned_cols=120  Identities=43%  Similarity=0.772  Sum_probs=91.5

Q ss_pred             ceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCC-cccccCCceeEEEEEecC
Q 024779          131 LCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGV-TDYDKGNAYAQIAIGTDD  209 (262)
Q Consensus       131 ~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~i~~~v~d  209 (262)
                      +.|+.+.|+|++++.+||+++|||++......++......++..........+.+....+. .+...+.+..|++|.++|
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~v~d   80 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTEEPYDNGNGFGHLAFAVDD   80 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecCCCCCCcCCCCCeEEEEEEeCC
Confidence            5799999999999999999999999887654444344555666432113456666654332 223334578999999999


Q ss_pred             HHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEE
Q 024779          210 VYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFV  252 (262)
Q Consensus       210 l~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~  252 (262)
                      +++++++++++|+++..+|....  .++++|++||+||.|||+
T Consensus        81 id~~~~~l~~~G~~~~~~~~~~~--~~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          81 VYAACERLEEMGVEVTKPPGDGG--MKGIAFIKDPDGYWIELI  121 (121)
T ss_pred             HHHHHHHHHHCCCEEeeCCccCC--CceEEEEECCCCCEEEeC
Confidence            99999999999999998886553  357899999999999985

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=99.83  E-value=3.6e-20  Score=143.24  Aligned_cols=255  Identities=18%  Similarity=0.302  Sum_probs=170.8

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCC-----CCCCCCceeEEE
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDK-----YDIGTGFGHFGI   75 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~~i~~   75 (262)
                      ++||.+.|.|...+..||+..|||++....+.+.+....+-..+......+.+.-..++..+.     ..+|.|...+||
T Consensus        18 f~Hi~F~vgna~q~A~~y~~~fGfep~A~~~letg~~~~~s~alr~g~~vFv~~s~~~p~~~~~G~~l~~Hgdgvkdvaf   97 (381)
T KOG0638|consen   18 FHHIEFWVGNAKQAARWYCSGFGFEPLAYRGLETGSREWASHALRQGKIVFVFNSAYNPDNSEYGDHLVKHGDGVKDVAF   97 (381)
T ss_pred             eeEEEEEecCcHHHHHHHHhhcCCcchhcccccccchHHHHHHhhcCCEEEEEecCCCCCchhhhhhhhhcccchhceEE
Confidence            589999999999999999999999988755444332222222222222222222221111111     225678888999


Q ss_pred             EeCCHHHHHHHHHHcCCeeecCCcccCC--CCeEEEEEECCCCCEEEEEEcCCC-----------------C-------C
Q 024779           76 AVDDVAKTVELIKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLERGPT-----------------P-------E  129 (262)
Q Consensus        76 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~--~~~~~~~~~DP~G~~iel~~~~~~-----------------~-------~  129 (262)
                      +|+|++++.+.+.++|+.+..+|....+  |..+++.+..+.-....+++....                 |       .
T Consensus        98 eVeD~da~~~~~va~Ga~v~~~p~~~~da~G~v~~A~l~tygd~thtlvEr~~y~g~FLPGF~~v~~~~~fp~l~~~~~~  177 (381)
T KOG0638|consen   98 EVEDADAIFQEAVANGAKVVRPPWEESDAQGAVTYAVLKTYGDTTHTLVERKGYKGPFLPGFEPVSSDALFPKLPKGGLN  177 (381)
T ss_pred             EecchHHHHHHHHHcCCcccCCcceeeccCCcEEEEEEecccchhhhhhhhccccccCCCCcccCccccccCCCCcccee
Confidence            9999999999999999999998876544  556777777777655555543311                 1       2


Q ss_pred             CceeEEeeec--ChhhhHHHHHHhcCCeeeeeccCcCccceeee---eccCCCCcceEEEEeeecCCcc----------c
Q 024779          130 PLCQVMLRVG--DLDRSINFYEQAFGMELLRKRDNPEYKYTIAM---MGYGPEDKNVVLELTYNYGVTD----------Y  194 (262)
Q Consensus       130 ~~~~v~l~v~--d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~----------~  194 (262)
                      +++|++.+++  .++.+.+||.+.|||...+..+.+..+.....   .-..+.+....+.+.+..+...          +
T Consensus       178 ~iDH~vgn~p~~em~sa~~wy~~~l~Fhrfwsvdd~~v~te~SaLrs~vlan~~esi~mpinEp~~G~k~ksQIqeyv~y  257 (381)
T KOG0638|consen  178 RIDHVVGNQPDGEMESALRWYEKCLGFHRFWSVDDSQVHTEYSALRSIVLANYEESIKMPINEPAPGKKKKSQIQEYVEY  257 (381)
T ss_pred             ehhhhhccCCcccchHHHHHHHHhhcccccccCCcchhhhHHHHHHHHHHhcCCccEEEeccCCCCCCccHHHHHHHHHh
Confidence            7899999999  78999999999999998887664433221111   1112233334444444332221          3


Q ss_pred             ccCCceeEEEEEecCHHHHHHHHHHhCCeeecCCccC--------CC-----C-------cceEEEEeCCCCcEEEEEec
Q 024779          195 DKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPL--------PG-----I-------NTKITACLDPDGWKTVFVDN  254 (262)
Q Consensus       195 ~~~~~~~~i~~~v~dl~~~~~~l~~~g~~~~~~~~~~--------~~-----~-------~~~~~~~~DP~G~~ie~~~~  254 (262)
                      ..|+|++||++.++|+-.+++.++++|.+++.+|..-        ..     .       ...+..=.|-.|.++.++..
T Consensus       258 ~gG~GvQHiaL~tedIi~Ai~~lr~rG~eFLs~Ps~YYqnl~erl~~~~~~vked~~~l~el~ILvD~De~gyLLQIFTK  337 (381)
T KOG0638|consen  258 HGGAGVQHIALNTEDIIEAIRGLRARGGEFLSPPSTYYQNLKERLSTSIRKVKEDIKLLEELGILVDFDENGYLLQIFTK  337 (381)
T ss_pred             cCCCceeeeeecchHHHHHHHHHHhcCCccccCCHHHHHhHHHHhhhhhhhhhccHHHHHHcCeEEecCCCcEEeeeecc
Confidence            4578999999999999999999999999999888321        10     0       01344446777888888764


Q ss_pred             c
Q 024779          255 V  255 (262)
Q Consensus       255 ~  255 (262)
                      +
T Consensus       338 p  338 (381)
T KOG0638|consen  338 P  338 (381)
T ss_pred             c
Confidence            4

>PLN02300 lactoylglutathione lyase

Probab=99.82  E-value=3.3e-19  Score=144.53  Aligned_cols=132  Identities=52%  Similarity=0.866  Sum_probs=103.0

Q ss_pred             CCCCCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEE
Q 024779          126 PTPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAI  205 (262)
Q Consensus       126 ~~~~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~  205 (262)
                      ....++.|+.|.|+|++++++||+++|||++..+...++..+...++..++...+..+++....+......+.+..|++|
T Consensus        20 ~~i~~l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~~~g~~hia~   99 (286)
T PLN02300         20 KDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFVVELTYNYGVDKYDIGTGFGHFGI   99 (286)
T ss_pred             cccceEEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCCCCCceEEEEeccCCCCccccCCCccEEEE
Confidence            34568999999999999999999999999987655444444455566554434456677765433333334568899999


Q ss_pred             EecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecccc
Q 024779          206 GTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDF  257 (262)
Q Consensus       206 ~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~  257 (262)
                      .|+|+++++++++++|+++...|...+++..+++|++||+||.|||++++..
T Consensus       100 ~v~dvd~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~  151 (286)
T PLN02300        100 AVEDVAKTVELVKAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQRGPT  151 (286)
T ss_pred             EeCCHHHHHHHHHHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeCCCC
Confidence            9999999999999999999988877776555788999999999999998653

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.82  E-value=1.3e-19  Score=133.40  Aligned_cols=123  Identities=17%  Similarity=0.184  Sum_probs=91.2

Q ss_pred             CceeEEeeecChhhhHHHHHHhcCCeeeeeccCc-CccceeeeeccCCCC---cceEEEEeeecCCcccccCCceeEEEE
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNP-EYKYTIAMMGYGPED---KNVVLELTYNYGVTDYDKGNAYAQIAI  205 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~i~~  205 (262)
                      +++||.|.|+|++++++||+++|||++......+ .......++..++..   ..+.+.+.       ...++++.||+|
T Consensus         1 ri~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~-------~~~~~g~~Hiaf   73 (153)
T cd07257           1 RLGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRGEEYVDHHTLALA-------QGPESGVHHAAF   73 (153)
T ss_pred             CccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCCCCcccchHHHHh-------cCCCCceeEEEE
Confidence            5789999999999999999999999987654332 122344555543211   01112221       112468999999


Q ss_pred             EecCHHHHH---HHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecccccc
Q 024779          206 GTDDVYKTA---EAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDFLK  259 (262)
Q Consensus       206 ~v~dl~~~~---~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~~~  259 (262)
                      .|+|++++.   ++|+++|+++..+|+++..+...++|++||+||.|||+.......
T Consensus        74 ~v~die~~~~~~~~L~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~~~~~~~  130 (153)
T cd07257          74 EVHDFDAQGLGHDYLREKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYTDGDLVN  130 (153)
T ss_pred             EcCCHHHHHHHHHHHHHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEcCceeEc
Confidence            999999986   999999999998888777665567899999999999998776543

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.82  E-value=1.1e-18  Score=130.77  Aligned_cols=124  Identities=40%  Similarity=0.710  Sum_probs=93.2

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCC---------------ceeEEEeeecCCCCC--
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPED---------------SHFVIELTYNYGVDK--   63 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~l~~~~~~~~~~--   63 (262)
                      ++|++|.|+|+++|++||+++|||++..+...+..++..+++..+...               ....++|..+.....  
T Consensus        28 ~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL~~~~~~~~~p  107 (185)
T PLN03042         28 MQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNWGTESDP  107 (185)
T ss_pred             EEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcchhhcccccccCCCEEEEEEcCCCcccc
Confidence            589999999999999999999999998887666666667776543210               123577775433211  


Q ss_pred             ----CC----CCCCceeEEEEeCCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCC
Q 024779           64 ----YD----IGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  126 (262)
Q Consensus        64 ----~~----~~~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~  126 (262)
                          +.    .+.|+.|++|.|+|+++++++|+++|+.+...|....  ....+++.||||+.|||++...
T Consensus       108 ~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L~~~Gv~v~~~p~~~~--~~~~~fi~DPdG~~IEl~e~~~  176 (185)
T PLN03042        108 EFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKPDDGK--MKGLAFIKDPDGYWIEIFDLKR  176 (185)
T ss_pred             cccccccCCCCCCCccEEEEEcCCHHHHHHHHHHCCCeEEeCCccCC--ceeEEEEECCCCCEEEEEECCC
Confidence                11    2358999999999999999999999999886654322  3466788999999999998643

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.82  E-value=4.7e-19  Score=129.02  Aligned_cols=122  Identities=18%  Similarity=0.238  Sum_probs=90.1

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcC-----------ccceeeeeccCCCCcceEEEEeeecCCcc----
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPE-----------YKYTIAMMGYGPEDKNVVLELTYNYGVTD----  193 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----  193 (262)
                      .+++||+|.|+|++++++||++ |||++......++           ....+.++..  ..++..++|.....+..    
T Consensus         2 ~~i~Hi~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~--~~g~~~iel~~~~~~~~~~~~   78 (142)
T cd08353           2 SRMDNVGIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRT--PDGHSRLELSKFHHPAVIADH   78 (142)
T ss_pred             ceeeeEEEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeC--CCCCceEEEEEecCCCCcCcC
Confidence            3689999999999999999998 9998865433221           1123344432  22456778876432211    


Q ss_pred             ---cccCCceeEEEEEecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEec
Q 024779          194 ---YDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDN  254 (262)
Q Consensus       194 ---~~~~~~~~~i~~~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  254 (262)
                         ...+.++.||+|.|+|+++++++|+++|+++..++...+++ .+++|++||+|+.|||+|.
T Consensus        79 ~~~~~~~~g~~hia~~v~d~d~~~~~l~~~G~~~~~~~~~~~~~-~r~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          79 RPAPVNALGLRRVMFAVDDIDARVARLRKHGAELVGEVVQYENS-YRLCYIRGPEGILIELAEQ  141 (142)
T ss_pred             CCCCCCCCCceEEEEEeCCHHHHHHHHHHCCCceeCCceecCCC-eEEEEEECCCCCEEEeeec
Confidence               12345788999999999999999999999999866554443 4889999999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.82  E-value=7.7e-19  Score=123.55  Aligned_cols=114  Identities=33%  Similarity=0.632  Sum_probs=86.9

Q ss_pred             CceeEEeeecChhhhHHHHHHhcCCeeeeeccCcC-----------ccceeeeeccCCCCcceEEEEeeecCCcccccCC
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPE-----------YKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGN  198 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  198 (262)
                      ++.|++|.|+|+++|++||+++|||++..+.+.++           +.+...++...+...+..++|...++..++..+.
T Consensus         2 ~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~~~~~g~   81 (127)
T cd08358           2 RALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIGDYELGN   81 (127)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCCCCCCCCCC
Confidence            57899999999999999999999999887665554           3333344554434456789999876655555455


Q ss_pred             ceeEEEEEecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEe
Q 024779          199 AYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVD  253 (262)
Q Consensus       199 ~~~~i~~~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~  253 (262)
                      +  |++|.|++. ++.++|+++|+++...|.       .+++++||||+.|||+.
T Consensus        82 ~--~~hlav~~~-d~~~~l~~~Gv~~~~~~~-------~~~fi~DPDG~~ie~~~  126 (127)
T cd08358          82 D--FLGITIHSK-QAVSNAKKHNWPVTEVED-------GVYEVKAPGGYKFYLID  126 (127)
T ss_pred             C--EEEEEEECH-HHHHHHHHCCCceecCCC-------CEEEEECCCCCEEEEec
Confidence            5  666666766 566999999999987654       27899999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.82  E-value=1.3e-18  Score=123.03  Aligned_cols=120  Identities=54%  Similarity=0.938  Sum_probs=89.4

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCC-CCCCCCCCceeEEEEeCC
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGV-DKYDIGTGFGHFGIAVDD   79 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~i~~~v~d   79 (262)
                      |+||+|.|+|++++.+||+++||+++......++.....+++..+.......+++...... .+...+.++.|++|.++|
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~v~d   80 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTEEPYDNGNGFGHLAFAVDD   80 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecCCCCCCcCCCCCeEEEEEEeCC
Confidence            6899999999999999999999999887654333344556666543101234455443222 222344578899999999


Q ss_pred             HHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEE
Q 024779           80 VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  122 (262)
Q Consensus        80 ~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~  122 (262)
                      +++++++++++|+++..+|...  ++.+.++|.||+|+.+||+
T Consensus        81 id~~~~~l~~~G~~~~~~~~~~--~~~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          81 VYAACERLEEMGVEVTKPPGDG--GMKGIAFIKDPDGYWIELI  121 (121)
T ss_pred             HHHHHHHHHHCCCEEeeCCccC--CCceEEEEECCCCCEEEeC
Confidence            9999999999999998776654  3567789999999999985

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>PRK11478 putative lyase; Provisional

Probab=99.80  E-value=1.9e-18  Score=123.66  Aligned_cols=121  Identities=15%  Similarity=0.129  Sum_probs=84.9

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcC-ccceeeeeccCCCCcceEEEEeeecCCcc---cccCCceeEEE
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPE-YKYTIAMMGYGPEDKNVVLELTYNYGVTD---YDKGNAYAQIA  204 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~i~  204 (262)
                      .+++||+|.|+|++++.+||+++|||++......++ ..+.. .+...   ++..+++.....+..   .....+..|++
T Consensus         5 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~-~~~~~---~~~~l~l~~~~~~~~~~~~~~~~g~~hi~   80 (129)
T PRK11478          5 KQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKG-DLALN---GQYVIELFSFPFPPERPSRPEACGLRHLA   80 (129)
T ss_pred             ceecEEEEEcCCHHHHHHHHHHHhCCEeccccccccccccee-eEecC---CCcEEEEEEecCCCCCCCCCCCCceeEEE
Confidence            468999999999999999999999999864322111 11111 12211   245666665322111   11235788999


Q ss_pred             EEecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEec
Q 024779          205 IGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDN  254 (262)
Q Consensus       205 ~~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  254 (262)
                      |.|+|+++++++|+++|+++...+....++ .+++|++||+||.|||+|.
T Consensus        81 f~v~d~~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iEl~~~  129 (129)
T PRK11478         81 FSVDDIDAAVAHLESHNVKCEAIRVDPYTQ-KRFTFFNDPDGLPLELYEQ  129 (129)
T ss_pred             EEeCCHHHHHHHHHHcCCeeeccccCCCCC-CEEEEEECCCCCEEEEEeC
Confidence            999999999999999999987443332233 4789999999999999974

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.80  E-value=2.3e-18  Score=124.00  Aligned_cols=121  Identities=17%  Similarity=0.184  Sum_probs=91.6

Q ss_pred             CCCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEe
Q 024779          128 PEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGT  207 (262)
Q Consensus       128 ~~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v  207 (262)
                      |.+++|+.|.|+|++++++||+++|||++..... .    ...++...+...++.+.+....     ....++.|++|.|
T Consensus         1 ~~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~-~----~~~~~~~~~~~~~~~i~l~~~~-----~~~~g~~hiaf~v   70 (134)
T cd08360           1 PRRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFK-G----RGAFLRAAGGGDHHNLFLIKTP-----APMAGFHHAAFEV   70 (134)
T ss_pred             CceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEec-C----cEEEEECCCCCCCcEEEEecCC-----CCCCcceEEEEEe
Confidence            4678999999999999999999999999875532 1    1234543322245566665321     1246899999999


Q ss_pred             cCHHHHH---HHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccccc
Q 024779          208 DDVYKTA---EAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDFL  258 (262)
Q Consensus       208 ~dl~~~~---~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~~  258 (262)
                      +|++++.   ++|+++|+++...|..++.+..+++|++||+||.|||.......
T Consensus        71 ~d~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~~~~~~  124 (134)
T cd08360          71 GDIDEVMLGGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGADMDYV  124 (134)
T ss_pred             CCHHHHHHHHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEcccccc
Confidence            9988777   59999999988777777665557789999999999999866543

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.80  E-value=2.2e-18  Score=125.28  Aligned_cols=118  Identities=10%  Similarity=0.128  Sum_probs=86.4

Q ss_pred             CCCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCcc-ceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEE
Q 024779          128 PEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYK-YTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIG  206 (262)
Q Consensus       128 ~~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~  206 (262)
                      +.+++|++|.|+|++++.+||+++|||++..+...+++. ....++...  ...+.+.+..       ...+++.|++|.
T Consensus         4 ~~~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~--~~~h~~~~~~-------~~~~~~~Hiaf~   74 (143)
T cd07243           4 AHRLDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCS--NKPHDIAFVG-------GPDGKLHHFSFF   74 (143)
T ss_pred             CceeCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecC--CCcceEEEec-------CCCCCceEEEEE
Confidence            457999999999999999999999999986654322221 123344432  1233444431       113578999999


Q ss_pred             ecCHHH---HHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEec
Q 024779          207 TDDVYK---TAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDN  254 (262)
Q Consensus       207 v~dl~~---~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  254 (262)
                      |+|+++   +.++|+++|+++..+|.++..+.++.+|++|||||.|||++.
T Consensus        75 v~d~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~~  125 (143)
T cd07243          75 LESWEDVLKAGDIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFAG  125 (143)
T ss_pred             cCCHHHHHHHHHHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEecC
Confidence            998877   568999999999877776654445789999999999999875

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.80  E-value=1.8e-18  Score=128.41  Aligned_cols=126  Identities=21%  Similarity=0.253  Sum_probs=88.6

Q ss_pred             CCCceeEEeeecChhhhHHHHHHhcCCeeeeec----cC--------------cCccceeeeeccCCCCcceEEEEeeec
Q 024779          128 PEPLCQVMLRVGDLDRSINFYEQAFGMELLRKR----DN--------------PEYKYTIAMMGYGPEDKNVVLELTYNY  189 (262)
Q Consensus       128 ~~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~----~~--------------~~~~~~~~~~~~~~~~~~~~~~l~~~~  189 (262)
                      +.+++||.|.|+|++++++||+++|||++..+.    ..              ......+.++..+   .+..++|....
T Consensus         2 ~~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~---~~~~ieL~~~~   78 (162)
T TIGR03645         2 PRTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTG---DRIGVELFEFK   78 (162)
T ss_pred             CceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecC---CCCcEEEEecc
Confidence            357899999999999999999999999875321    10              0111334455432   24457777754


Q ss_pred             CCcccc-----cCCceeEEEEEecCHHHHHHHHHHhCCeeecCCccC--CCC-cceEEEEeCCCCcEEEEEeccc
Q 024779          190 GVTDYD-----KGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPL--PGI-NTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       190 ~~~~~~-----~~~~~~~i~~~v~dl~~~~~~l~~~g~~~~~~~~~~--~~~-~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                      ......     .+.|..|++|.|+|+++++++|+++|+++..++...  ++. ..+.+|++|||||.|||+++..
T Consensus        79 ~~~~~~~~~~~~~~g~~Hla~~v~dida~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~  153 (162)
T TIGR03645        79 NQENPEDNFEYWKTGVFHFCVQDPDVEGLAERIVAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSHSY  153 (162)
T ss_pred             CCCCCCcccccccccceEEEEEcCCHHHHHHHHHHcCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEcCh
Confidence            322211     246899999999999999999999998865433211  221 2378999999999999999764

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.80  E-value=4.9e-18  Score=122.61  Aligned_cols=121  Identities=22%  Similarity=0.256  Sum_probs=90.5

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCC------CCCCCCceeEE
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDK------YDIGTGFGHFG   74 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~------~~~~~~~~~i~   74 (262)
                      |+|++|.|+|++++.+||+++|||++..+....  .....++.  ...  ..+.+........      ...+.+..|++
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~--~~~~~~~~--~g~--~~l~l~~~~~~~~~~~~~~~~~~~g~~hia   74 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSE--DKASYLLR--QGD--INFVLNSPLNSFAPVADFLEKHGDGVCDVA   74 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCC--ceEEEEEE--cCC--EEEEEecCCCCCCchHHHHHhcCCceEEEE
Confidence            689999999999999999999999988764322  12233332  222  3445543221111      12456888999


Q ss_pred             EEeCCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCCCC
Q 024779           75 IAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTP  128 (262)
Q Consensus        75 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~~~  128 (262)
                      |.|+|+++++++|+++|+++..+|.... ++.+.++++||+|+.|+|++.....
T Consensus        75 ~~V~Dvda~~~~l~~~G~~v~~~p~~~~-~~~~~~~i~dp~G~~ie~~~~~~~~  127 (136)
T cd08342          75 FRVDDAAAAYERAVARGAKPVQEPVEEP-GELKIAAIKGYGDSLHTLVDRKGYK  127 (136)
T ss_pred             EEeCCHHHHHHHHHHcCCeEccCceecC-CeEEEEEEeccCCcEEEEEecCCCC
Confidence            9999999999999999999998887744 4778899999999999999976553

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.80  E-value=3.8e-18  Score=124.22  Aligned_cols=120  Identities=26%  Similarity=0.347  Sum_probs=86.2

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCC-----------CcceeeEeeecCCCceeEEEeeecCC---CC----
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPE-----------EKYTNAFLGYGPEDSHFVIELTYNYG---VD----   62 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~~~~~---~~----   62 (262)
                      ++||+|.|+|++++.+||++ |||++..+...++           ......++....  ....+++.....   ..    
T Consensus         4 i~Hi~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~--g~~~iel~~~~~~~~~~~~~~   80 (142)
T cd08353           4 MDNVGIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPD--GHSRLELSKFHHPAVIADHRP   80 (142)
T ss_pred             eeeEEEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCCC--CCceEEEEEecCCCCcCcCCC
Confidence            58999999999999999998 9998876543221           112233343222  233556654221   11    


Q ss_pred             CCCCCCCceeEEEEeCCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEc
Q 024779           63 KYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  124 (262)
Q Consensus        63 ~~~~~~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  124 (262)
                      ....+.|+.|+||.|+|+++++++|+++|+++..++.... .+.+.+|+.||+|+.|||++.
T Consensus        81 ~~~~~~g~~hia~~v~d~d~~~~~l~~~G~~~~~~~~~~~-~~~r~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          81 APVNALGLRRVMFAVDDIDARVARLRKHGAELVGEVVQYE-NSYRLCYIRGPEGILIELAEQ  141 (142)
T ss_pred             CCCCCCCceEEEEEeCCHHHHHHHHHHCCCceeCCceecC-CCeEEEEEECCCCCEEEeeec
Confidence            1123458889999999999999999999999987665444 367889999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PRK11478 putative lyase; Provisional

Probab=99.79  E-value=5.3e-18  Score=121.34  Aligned_cols=119  Identities=23%  Similarity=0.274  Sum_probs=81.3

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCC---CCCCCCCCCceeEEEEe
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG---VDKYDIGTGFGHFGIAV   77 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~i~~~v   77 (262)
                      |+||+|.|+|++++.+||+++|||++..+...+........+..+.   ...+++.....   .+......|+.|++|.|
T Consensus         7 i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~g~~hi~f~v   83 (129)
T PRK11478          7 VHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKGDLALNG---QYVIELFSFPFPPERPSRPEACGLRHLAFSV   83 (129)
T ss_pred             ecEEEEEcCCHHHHHHHHHHHhCCEecccccccccccceeeEecCC---CcEEEEEEecCCCCCCCCCCCCceeEEEEEe
Confidence            5899999999999999999999999865422111111111222222   22455543211   11122345788999999


Q ss_pred             CCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEE
Q 024779           78 DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  123 (262)
Q Consensus        78 ~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~  123 (262)
                      +|+++++++|+++|+++...+.... ++.+.+||.||+|+.|||++
T Consensus        84 ~d~~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~iEl~~  128 (129)
T PRK11478         84 DDIDAAVAHLESHNVKCEAIRVDPY-TQKRFTFFNDPDGLPLELYE  128 (129)
T ss_pred             CCHHHHHHHHHHcCCeeeccccCCC-CCCEEEEEECCCCCEEEEEe
Confidence            9999999999999999864332222 35678899999999999986

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.79  E-value=2.2e-18  Score=122.49  Aligned_cols=119  Identities=21%  Similarity=0.289  Sum_probs=85.5

Q ss_pred             CceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcc---cccCCceeEEEEE
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD---YDKGNAYAQIAIG  206 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~i~~~  206 (262)
                      ++.|++|.|+|++++++||+++|||++......+...+...++..+   .+..+++.......+   .....+..|++|.
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~g~~hi~f~   77 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFD---DGARLELMTRPDIAPSPNEGERTGWAHLAFS   77 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecC---CCcEEEEEcCcccCCCcccCCCCceEEEEEE
Confidence            4789999999999999999999999986443222223344455543   235567765322211   1223578999999


Q ss_pred             ec---CHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEE
Q 024779          207 TD---DVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFV  252 (262)
Q Consensus       207 v~---dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~  252 (262)
                      |+   |+++++++|+++|+++..+|...+.+ .+.++++|||||.|||.
T Consensus        78 v~~~~~v~~~~~~l~~~g~~~~~~~~~~~~g-~~~~~~~DPdG~~iE~~  125 (125)
T cd07241          78 VGSKEAVDELTERLRADGYLIIGEPRTTGDG-YYESVILDPEGNRIEIT  125 (125)
T ss_pred             CCCHHHHHHHHHHHHHCCCEEEeCceecCCC-eEEEEEECCCCCEEEeC
Confidence            95   58999999999999999877544443 24577999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.79  E-value=4.2e-18  Score=120.70  Aligned_cols=116  Identities=17%  Similarity=0.173  Sum_probs=85.1

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEec
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTD  208 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~  208 (262)
                      .+++|+.|.|+|++++++||+++|||++.....  +.  . .++.......++.+.+..       ...++..|++|.|.
T Consensus         3 ~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~--~~--~-~~~~~~~~~~~~~~~l~~-------~~~~~~~hiaf~v~   70 (122)
T cd07265           3 LRPGHVQLRVLDLEEAIKHYREVLGLDEVGRDD--QG--R-VYLKAWDEFDHHSIVLRE-------ADTAGLDFMGFKVL   70 (122)
T ss_pred             ceEeEEEEEeCCHHHHHHHHHhccCCEeeeecC--Cc--e-EEEEccCCCcccEEEecc-------CCCCCeeEEEEEeC
Confidence            478999999999999999999999999865431  11  1 223221112234454431       12357889999996


Q ss_pred             ---CHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          209 ---DVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       209 ---dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                         |+++++++|+++|+++...|.....+.++.+|++||+||.|||++..+
T Consensus        71 ~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~~  121 (122)
T cd07265          71 DDADLEKLEARLQAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYADKE  121 (122)
T ss_pred             CHHHHHHHHHHHHHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEecc
Confidence               899999999999999987665444443578999999999999998765

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.78  E-value=1.7e-17  Score=116.78  Aligned_cols=113  Identities=43%  Similarity=0.849  Sum_probs=81.7

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCC-----------CcceeeEeeecCCCceeEEEeeecCCCCCCCCCCC
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPE-----------EKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTG   69 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   69 (262)
                      +.|++|.|+|+++|++||+++|||++..+...+.           +.+...++.+++......+++..+.+..+...+.+
T Consensus         3 ~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~~~~~g~~   82 (127)
T cd08358           3 ALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIGDYELGND   82 (127)
T ss_pred             eEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCCCCCCCCCCC
Confidence            5799999999999999999999999887654443           22223445544334456788887655444454555


Q ss_pred             ceeEEEEeCCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEE
Q 024779           70 FGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  123 (262)
Q Consensus        70 ~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~  123 (262)
                        |++|.|++. ++.++|+++|+++...+.       ..+++.||||+.|||+.
T Consensus        83 --~~hlav~~~-d~~~~l~~~Gv~~~~~~~-------~~~fi~DPDG~~ie~~~  126 (127)
T cd08358          83 --FLGITIHSK-QAVSNAKKHNWPVTEVED-------GVYEVKAPGGYKFYLID  126 (127)
T ss_pred             --EEEEEEECH-HHHHHHHHCCCceecCCC-------CEEEEECCCCCEEEEec
Confidence              566777766 556999999998865432       16888999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.78  E-value=8.2e-18  Score=119.47  Aligned_cols=120  Identities=20%  Similarity=0.241  Sum_probs=84.7

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcC-ccceeeeeccCCCCcceEEEEeeecCC--cc-cccCCceeEEE
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPE-YKYTIAMMGYGPEDKNVVLELTYNYGV--TD-YDKGNAYAQIA  204 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~-~~~~~~~~~i~  204 (262)
                      .+++|+.|.|+|++++++||+++|||++......++ ..+. ..+...   ....+++......  .+ ...+.+..|++
T Consensus         2 ~~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~-~~~~~~---~~~~i~l~~~~~~~~~~~~~~~~g~~h~~   77 (125)
T cd08352           2 FGIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYK-LDLLLN---GGYQLELFSFPNPPERPSYPEACGLRHLA   77 (125)
T ss_pred             CccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEE-EEEecC---CCcEEEEEEcCCCCCCCCCCcCCCceEEE
Confidence            368999999999999999999999999876532222 1122 222211   1234444432221  11 12345889999


Q ss_pred             EEecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEe
Q 024779          205 IGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVD  253 (262)
Q Consensus       205 ~~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~  253 (262)
                      |.|+|+++++++++++|+++...+....++ .+++|++||+||.|||+|
T Consensus        78 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~~DP~G~~iEl~~  125 (125)
T cd08352          78 FSVEDIEAAVKHLKAKGVEVEPIRVDEFTG-KRFTFFYDPDGLPLELYE  125 (125)
T ss_pred             EEeCCHHHHHHHHHHcCCccccccccCCCc-eEEEEEECCCCCEEEecC
Confidence            999999999999999999988765433333 478999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.78  E-value=1.3e-17  Score=118.55  Aligned_cols=118  Identities=25%  Similarity=0.389  Sum_probs=84.1

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCC---CCCCCCceeEEEEe
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDK---YDIGTGFGHFGIAV   77 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~i~~~v   77 (262)
                      |+||+|.|+|++++++||+++|||++......+...+...|+.+++ .  ..+++.......+   .....|+.|++|.|
T Consensus         2 ~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~l~~~~~~~~~~~~~~~~g~~hi~f~v   78 (125)
T cd07241           2 IEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDD-G--ARLELMTRPDIAPSPNEGERTGWAHLAFSV   78 (125)
T ss_pred             ceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCC-C--cEEEEEcCcccCCCcccCCCCceEEEEEEC
Confidence            6899999999999999999999999865433223334455666542 1  2455554222111   12335789999999


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEE
Q 024779           78 D---DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  122 (262)
Q Consensus        78 ~---d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~  122 (262)
                      +   |+++++++|+++|+++..+|..... +.+.+++.|||||.|||.
T Consensus        79 ~~~~~v~~~~~~l~~~g~~~~~~~~~~~~-g~~~~~~~DPdG~~iE~~  125 (125)
T cd07241          79 GSKEAVDELTERLRADGYLIIGEPRTTGD-GYYESVILDPEGNRIEIT  125 (125)
T ss_pred             CCHHHHHHHHHHHHHCCCEEEeCceecCC-CeEEEEEECCCCCEEEeC
Confidence            6   4899999999999999876654443 445567899999999983

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.78  E-value=9.4e-18  Score=123.56  Aligned_cols=125  Identities=14%  Similarity=0.171  Sum_probs=92.7

Q ss_pred             CCCCceeEEeeecChhhhHHHHHHhcCCeeeeeccCc---CccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEE
Q 024779          127 TPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNP---EYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQI  203 (262)
Q Consensus       127 ~~~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i  203 (262)
                      .+.+++||.|.|+|++++++||+++|||++.......   +......++..+  ..++.+.+...      ....++.|+
T Consensus         6 ~~~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~i~~~~~------~~~~g~~Hi   77 (154)
T cd07237           6 GDQGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCN--GRHHSLALAEG------PGPKRIHHL   77 (154)
T ss_pred             CCCccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeC--CCCCCEEEEcC------CCCceeEEE
Confidence            4568999999999999999999999999986543221   112344555542  23344544321      124689999


Q ss_pred             EEEecCHH---HHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecccccc
Q 024779          204 AIGTDDVY---KTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDFLK  259 (262)
Q Consensus       204 ~~~v~dl~---~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~~~  259 (262)
                      +|.|+|++   +++++|+++|+++..++..++.+..+.+|++||+|+.|||+......+
T Consensus        78 af~V~d~~~l~~~~~~L~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~~~~~~  136 (154)
T cd07237          78 MLEVTSLDDVGRAYDRVRARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWGGRTVD  136 (154)
T ss_pred             EEEcCCHHHHHHHHHHHHHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccCceEcc
Confidence            99998655   689999999999988887776655688999999999999998766543

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.77  E-value=1.3e-17  Score=116.67  Aligned_cols=114  Identities=23%  Similarity=0.255  Sum_probs=85.0

Q ss_pred             ceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecCH
Q 024779          131 LCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDV  210 (262)
Q Consensus       131 ~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~dl  210 (262)
                      +.|+.|.|+|++++++||+++||+++..... ...  .+.++..++   ...+.+.......  ...+...|++|.|+|+
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~-~~~--~~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~f~v~di   72 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGD-GGG--DYAVFSTGG---GAVGGLMKAPEPA--AGSPPGWLVYFAVDDV   72 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccC-CCC--ceEEEEeCC---ccEEEEecCCCCC--CCCCCeEEEEEEeCCH
Confidence            4799999999999999999999999875543 122  233444321   2233333322111  2345678999999999


Q ss_pred             HHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEe
Q 024779          211 YKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVD  253 (262)
Q Consensus       211 ~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~  253 (262)
                      ++++++|+++|+++..+|...+++ ++.++++||+||.|+|+|
T Consensus        73 ~~~~~~l~~~g~~~~~~~~~~~~~-~~~~~~~DPdG~~~~l~~  114 (114)
T cd07247          73 DAAAARVEAAGGKVLVPPTDIPGV-GRFAVFADPEGAVFGLWQ  114 (114)
T ss_pred             HHHHHHHHHCCCEEEeCCcccCCc-EEEEEEECCCCCEEEeEC
Confidence            999999999999999988777643 489999999999999975

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.77  E-value=2.4e-17  Score=117.09  Aligned_cols=119  Identities=29%  Similarity=0.382  Sum_probs=82.7

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCC--CC-CCCCCCCceeEEEEe
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG--VD-KYDIGTGFGHFGIAV   77 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~-~~~~~~~~~~i~~~v   77 (262)
                      |+||+|.|+|++++++||+++|||++..+...++.......+... ...  .+++.....  .. ....+.|+.|++|.|
T Consensus         4 ~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~--~i~l~~~~~~~~~~~~~~~~g~~h~~~~v   80 (125)
T cd08352           4 IHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKLDLLLN-GGY--QLELFSFPNPPERPSYPEACGLRHLAFSV   80 (125)
T ss_pred             cceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEEEEecC-CCc--EEEEEEcCCCCCCCCCCcCCCceEEEEEe
Confidence            689999999999999999999999987654222211111222221 122  334432211  11 112345888999999


Q ss_pred             CCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEE
Q 024779           78 DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  123 (262)
Q Consensus        78 ~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~  123 (262)
                      +|+++++++|+++|+++..++..... +.+.+|+.||+|+.|||+|
T Consensus        81 ~d~~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~~DP~G~~iEl~~  125 (125)
T cd08352          81 EDIEAAVKHLKAKGVEVEPIRVDEFT-GKRFTFFYDPDGLPLELYE  125 (125)
T ss_pred             CCHHHHHHHHHHcCCccccccccCCC-ceEEEEEECCCCCEEEecC
Confidence            99999999999999998765544333 5567899999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.77  E-value=1.2e-17  Score=122.78  Aligned_cols=121  Identities=22%  Similarity=0.353  Sum_probs=85.1

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCC-CCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCC
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIP-EEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD   79 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d   79 (262)
                      |+||+|.|+|++++++||+++||+++..+...+ .......|+..+.... . ++... ..... ..+.++.|+||.|+|
T Consensus         2 i~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~~~-~-~~~~~-~~l~~-~~~~g~~Hiaf~v~d   77 (153)
T cd07257           2 LGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRGEE-Y-VDHHT-LALAQ-GPESGVHHAAFEVHD   77 (153)
T ss_pred             ccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCCCC-c-ccchH-HHHhc-CCCCceeEEEEEcCC
Confidence            689999999999999999999999987654332 2233566666543211 0 01000 00000 114689999999999


Q ss_pred             HHHHH---HHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcC
Q 024779           80 VAKTV---ELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        80 ~~~~~---~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                      ++++.   ++|+++|+++...+.....+...++|+.||+||.|||+...
T Consensus        78 ie~~~~~~~~L~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~~~  126 (153)
T cd07257          78 FDAQGLGHDYLREKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYTDG  126 (153)
T ss_pred             HHHHHHHHHHHHHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEcCc
Confidence            99986   99999999987665544444566789999999999999543

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.77  E-value=1.4e-17  Score=120.47  Aligned_cols=116  Identities=18%  Similarity=0.255  Sum_probs=88.5

Q ss_pred             eeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecCH-
Q 024779          132 CQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDV-  210 (262)
Q Consensus       132 ~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~dl-  210 (262)
                      +||.|.|+|++++.+||+++|||++..+...     ...++...+...++.+.+.       .....++.|++|.|+|+ 
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~~-----~~~~l~~~~~~~~h~~~~~-------~~~~~gl~Hiaf~v~~~~   68 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIED-----RIVFMRCHPNPFHHTFAVG-------PASSSHFHHVNFMVTDID   68 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeCC-----EEEEEEcCCCCCcceeeec-------cCCCCceEEEEEECCCHH
Confidence            4899999999999999999999998765321     2345543322233444332       12346899999999755 


Q ss_pred             --HHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecccccc
Q 024779          211 --YKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDFLK  259 (262)
Q Consensus       211 --~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~~~  259 (262)
                        +++.++|+++|+++..+|.+++.+..+.+|++||+|+.|||.-..+...
T Consensus        69 ~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~~~~  119 (141)
T cd07258          69 DIGKALYRIKAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSFGMEEFA  119 (141)
T ss_pred             HHHHHHHHHHHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEeCcceec
Confidence              5679999999999998888777666688999999999999998776554

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.77  E-value=2.8e-17  Score=122.00  Aligned_cols=123  Identities=28%  Similarity=0.329  Sum_probs=83.7

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEec--CC----------------CCcceeeEeeecCCCceeEEEeeecCCCC
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRD--IP----------------EEKYTNAFLGYGPEDSHFVIELTYNYGVD   62 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~--~~----------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~   62 (262)
                      |+||+|.|+|+++|++||+++|||++..+..  ..                ......+++..++   ...+++.......
T Consensus         5 i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---~~~ieL~~~~~~~   81 (162)
T TIGR03645         5 FSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGD---RIGVELFEFKNQE   81 (162)
T ss_pred             EEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCC---CCcEEEEeccCCC
Confidence            5899999999999999999999998753210  00                0113345555433   2235666533211


Q ss_pred             CCC-----CCCCceeEEEEeCCHHHHHHHHHHcCCeeecCC-ccc-C-CCCeEEEEEECCCCCEEEEEEcCC
Q 024779           63 KYD-----IGTGFGHFGIAVDDVAKTVELIKAKGGKVTREP-GPV-K-GGNTVIAFIEDPDGYKFELLERGP  126 (262)
Q Consensus        63 ~~~-----~~~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~-~~~-~-~~~~~~~~~~DP~G~~iel~~~~~  126 (262)
                      ...     .+.|+.|+||.|+|+++++++|+++|+++..++ ... . ....+.+|+.|||||.|||++...
T Consensus        82 ~~~~~~~~~~~g~~Hla~~v~dida~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~  153 (162)
T TIGR03645        82 NPEDNFEYWKTGVFHFCVQDPDVEGLAERIVAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSHSY  153 (162)
T ss_pred             CCCcccccccccceEEEEEcCCHHHHHHHHHHcCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEcCh
Confidence            111     246899999999999999999999998764332 111 1 112478999999999999998753

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.76  E-value=4.9e-17  Score=118.17  Aligned_cols=115  Identities=17%  Similarity=0.260  Sum_probs=81.5

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCc-ceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCC
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEK-YTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD   79 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d   79 (262)
                      |+||+|.|+|++++.+||+++|||++..+...+.+. ....|+..+.. .+ .+.+...       .+.++.|+||.|+|
T Consensus         7 l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~~~-~h-~~~~~~~-------~~~~~~Hiaf~v~d   77 (143)
T cd07243           7 LDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCSNK-PH-DIAFVGG-------PDGKLHHFSFFLES   77 (143)
T ss_pred             eCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecCCC-cc-eEEEecC-------CCCCceEEEEEcCC
Confidence            689999999999999999999999987654222221 23445544332 22 2233211       13578899999999


Q ss_pred             HHH---HHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEc
Q 024779           80 VAK---TVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  124 (262)
Q Consensus        80 ~~~---~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  124 (262)
                      +++   +.++|.++|+++...|.....+..+++||.|||||.|||+..
T Consensus        78 ~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~~  125 (143)
T cd07243          78 WEDVLKAGDIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFAG  125 (143)
T ss_pred             HHHHHHHHHHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEecC
Confidence            877   578999999998655543332346789999999999999853

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.76  E-value=2.3e-17  Score=122.46  Aligned_cols=120  Identities=20%  Similarity=0.230  Sum_probs=84.4

Q ss_pred             CCCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEe
Q 024779          128 PEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGT  207 (262)
Q Consensus       128 ~~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v  207 (262)
                      |.+++||+|.|+|++++++||+++|||++......+++.....++...+  ..+.+.+..       ..++++.|++|.|
T Consensus         1 ~~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~--~~~~i~l~~-------~~~~~~~Hiaf~v   71 (161)
T cd07256           1 PQRLDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRKG--GVHDTALTG-------GNGPRLHHVAFWV   71 (161)
T ss_pred             CceEEEEEEecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecCC--CcceEEEec-------CCCCceeEEEEEc
Confidence            4578999999999999999999999999875443322222233443221  234444431       1245789999999


Q ss_pred             cC---HHHHHHHHHHhCCee--ecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          208 DD---VYKTAEAIKLFGGKV--TREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       208 ~d---l~~~~~~l~~~g~~~--~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                      +|   +++++++|+++|+..  ..+|..+..+..+++|++||+||.|||++...
T Consensus        72 ~~~~~v~~~~~~L~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~~~  125 (161)
T cd07256          72 PEPHNIIRTCDLLAAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTGDY  125 (161)
T ss_pred             CCHHHHHHHHHHHHHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeecCc
Confidence            75   777889999999863  33455444334467999999999999987543

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.76  E-value=4.9e-17  Score=117.10  Aligned_cols=115  Identities=23%  Similarity=0.311  Sum_probs=84.2

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCH
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDV   80 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~   80 (262)
                      |+||+|.|+|++++++||+++||+++..+..  .   ...|+..+....+..+.+.....     ...++.|++|.|+|+
T Consensus         4 l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~--~---~~~~~~~~~~~~~~~i~l~~~~~-----~~~g~~hiaf~v~d~   73 (134)
T cd08360           4 LGHVVLFVPDVEAAEAFYRDRLGFRVSDRFK--G---RGAFLRAAGGGDHHNLFLIKTPA-----PMAGFHHAAFEVGDI   73 (134)
T ss_pred             eeEEEEEcCCHHHHHHHHHHhcCCEEEEEec--C---cEEEEECCCCCCCcEEEEecCCC-----CCCcceEEEEEeCCH
Confidence            6899999999999999999999999876542  1   24566554222233344443211     146899999999998


Q ss_pred             HHHH---HHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcC
Q 024779           81 AKTV---ELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        81 ~~~~---~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                      +++.   ++|.++|+++...+.....++..++||.||+|+.|||....
T Consensus        74 ~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~~~  121 (134)
T cd08360          74 DEVMLGGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGADM  121 (134)
T ss_pred             HHHHHHHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEccc
Confidence            8766   69999999987555444444567789999999999999643

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.76  E-value=2e-17  Score=118.11  Aligned_cols=119  Identities=23%  Similarity=0.318  Sum_probs=85.6

Q ss_pred             CceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcc------cccCCceeEE
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD------YDKGNAYAQI  203 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~------~~~~~~~~~i  203 (262)
                      +++|+.|.|+|++++++||+++|||++......++......++..+    ...++|........      ...+.+..|+
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~----~~~i~l~~~~~~~~~~~~~~~~~~~g~~~i   76 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALG----NTKVELLEPLGEDSPIAKFLEKNGGGIHHI   76 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecC----CEEEEEEecCCCCChHHHHHhcCCCceEEE
Confidence            4789999999999999999999999987553333333444555432    24566654322111      1124578899


Q ss_pred             EEEecCHHHHHHHHHHhCCeeecC-CccCCCCcceEEEE--eCCCCcEEEEEe
Q 024779          204 AIGTDDVYKTAEAIKLFGGKVTRE-PGPLPGINTKITAC--LDPDGWKTVFVD  253 (262)
Q Consensus       204 ~~~v~dl~~~~~~l~~~g~~~~~~-~~~~~~~~~~~~~~--~DP~G~~ie~~~  253 (262)
                      +|.|+|+++++++|+++|+++..+ |...++| .+..++  +||||+.||++|
T Consensus        77 ~~~v~di~~~~~~l~~~G~~~~~~~~~~~~~g-~~~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        77 AIEVDDIEAALETLKEKGVRLIDEEPRIGAGG-KPVAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             EEEcCCHHHHHHHHHHCCCcccCCCCccCCCC-CEEEEecccccCcEEEEecC
Confidence            999999999999999999999864 4443443 355666  799999999986

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.76  E-value=3.4e-17  Score=117.39  Aligned_cols=114  Identities=21%  Similarity=0.383  Sum_probs=82.4

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCC-
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD-   79 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d-   79 (262)
                      |+||.|.|+|++++++||+++||+++.....      ...++..++  .  .+.+......+......++.|++|.+++ 
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~--~--~l~l~~~~~~~~~~~~~~~~hiaf~v~~~   70 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVLGE------KTAYFTIGG--T--WLALNEEPDIPRNEIRQSYTHIAFTIEDS   70 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEeccCC------ccceEeeCc--e--EEEEEccCCCCcCCcCccceEEEEEecHH
Confidence            6899999999999999999999999865422      123444432  2  3344332222222223478899999984 


Q ss_pred             -HHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcC
Q 024779           80 -VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        80 -~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                       +++++++|.++|+++..++..... +.+.++|.||+||.|||.+..
T Consensus        71 dld~~~~~l~~~G~~~~~~~~~~~~-~~~~~~f~DPdG~~iEl~~~~  116 (131)
T cd08363          71 EFDAFYTRLKEAGVNILPGRKRDVR-DRKSIYFTDPDGHKLEVHTGT  116 (131)
T ss_pred             HHHHHHHHHHHcCCcccCCCccccC-cceEEEEECCCCCEEEEecCc
Confidence             999999999999998654433332 567899999999999999764

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.76  E-value=4.6e-17  Score=115.30  Aligned_cols=113  Identities=29%  Similarity=0.324  Sum_probs=81.1

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeC--
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD--   78 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~--   78 (262)
                      |+||.|.|+|++++.+||+++|||++.....  .   ..+++.......+..+.+..       ....++.|++|.|.  
T Consensus         5 l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~--~---~~~~~~~~~~~~~~~~~l~~-------~~~~~~~hiaf~v~~~   72 (122)
T cd07265           5 PGHVQLRVLDLEEAIKHYREVLGLDEVGRDD--Q---GRVYLKAWDEFDHHSIVLRE-------ADTAGLDFMGFKVLDD   72 (122)
T ss_pred             EeEEEEEeCCHHHHHHHHHhccCCEeeeecC--C---ceEEEEccCCCcccEEEecc-------CCCCCeeEEEEEeCCH
Confidence            5899999999999999999999999876531  1   13444432211222333321       11346789999997  


Q ss_pred             -CHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcC
Q 024779           79 -DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        79 -d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                       |+++++++|+++|+++...|.....+.++.++|.|||||.||++...
T Consensus        73 ~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  120 (122)
T cd07265          73 ADLEKLEARLQAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYADK  120 (122)
T ss_pred             HHHHHHHHHHHHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEec
Confidence             78999999999999987654333334457899999999999998653

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.75  E-value=6.8e-17  Score=117.08  Aligned_cols=114  Identities=23%  Similarity=0.430  Sum_probs=84.0

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeC--
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD--   78 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~--   78 (262)
                      |+||.|.|+|++++++||+++||+++..+..      ..+++..+.  .  .+.+......+....+.++.|++|.++  
T Consensus         5 i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~g--~--~l~l~~~~~~~~~~~~~~~~hiaf~v~~~   74 (139)
T PRK04101          5 INHICFSVSNLEKSIEFYEKVLGAKLLVKGR------KTAYFDLNG--L--WIALNEEKDIPRNEIHQSYTHIAFSIEEE   74 (139)
T ss_pred             EEEEEEEecCHHHHHHHHHhccCCEEEeecC------eeEEEecCC--e--EEEeeccCCCCCccCCCCeeEEEEEecHH
Confidence            5799999999999999999999999876532      244554432  2  333332222222223456789999998  


Q ss_pred             CHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcC
Q 024779           79 DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        79 d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                      |+++++++++++|+++...+..... +.+.++|.||+||.|||.+..
T Consensus        75 dv~~~~~~l~~~G~~i~~~~~~~~~-~~~~~~~~DPdGn~iEl~~~~  120 (139)
T PRK04101         75 DFDHWYQRLKENDVNILPGRERDER-DKKSIYFTDPDGHKFEFHTGT  120 (139)
T ss_pred             HHHHHHHHHHHCCceEcCCccccCC-CceEEEEECCCCCEEEEEeCC
Confidence            8999999999999998765544443 568899999999999999764

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.75  E-value=3.2e-17  Score=115.33  Aligned_cols=117  Identities=23%  Similarity=0.292  Sum_probs=85.4

Q ss_pred             eEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcc--cccCCceeEEEEEecCH
Q 024779          133 QVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD--YDKGNAYAQIAIGTDDV  210 (262)
Q Consensus       133 ~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~i~~~v~dl  210 (262)
                      ||.|.|+|++++++||+++|||++.......+ ...+..+... ......+.+........  .....+..|++|.|+|+
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~-~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~di   78 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGG-GFRWVTVAPP-GSPETSLVLAPPANPAAMSGLQPGGTPGLVLATDDI   78 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCC-CcEEEEEeCC-CCCeeEEEEeCCCCccccccccCCCceEEEEEehHH
Confidence            78999999999999999999999987654222 2333333321 11145555553322211  12345788999999999


Q ss_pred             HHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEe
Q 024779          211 YKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVD  253 (262)
Q Consensus       211 ~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~  253 (262)
                      ++++++++++|+++..+|.+.++  ++.+|++||+||.|+|+|
T Consensus        79 ~~~~~~l~~~g~~~~~~~~~~~~--~~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          79 DATYEELKARGVEFSEEPREMPY--GTVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             HHHHHHHHhCCCEEeeccccCCC--ceEEEEECCCCCEEEEeC
Confidence            99999999999999988854444  588999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.75  E-value=5.7e-18  Score=120.69  Aligned_cols=120  Identities=25%  Similarity=0.296  Sum_probs=83.6

Q ss_pred             CceeEEeeecChhhhHHHHHHhcCCeeeeeccC--cCccceeeeeccCCCCcceEEEEeeecCCccccc---CCceeEEE
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDN--PEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDK---GNAYAQIA  204 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~i~  204 (262)
                      +++||++.|+|++++.+||+++|||++......  ........++..  ......+.............   ..+..|++
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~   78 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRI--GEGHIELFLNPSPPPRASGHSFPEHGGHHIA   78 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEES--TSSCEEEEEEESSSSSSEEEHHHSHTSEEEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeecc--cccceeeeeeccccccccccccccccceeEE
Confidence            479999999999999999999999999987652  222233333332  23444444443322221111   01334555


Q ss_pred             EE---ecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEE
Q 024779          205 IG---TDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVF  251 (262)
Q Consensus       205 ~~---v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~  251 (262)
                      +.   ++|+++++++|++.|+++..+|.....+....+|++||+||.|||
T Consensus        79 ~~~~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   79 FLAFDVDDLDAAYERLKAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             EEESSHHHHHHHHHHHHHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             EEeccHHHHHHHHHHHhhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            55   568899999999999999999877777665667899999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.75  E-value=9.1e-17  Score=118.31  Aligned_cols=117  Identities=21%  Similarity=0.347  Sum_probs=85.8

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCC---CCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEe
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIP---EEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV   77 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v   77 (262)
                      |+||+|.|+|++++++||+++||+++..+....   ......+++..+....  .+.+...      ..+.++.|++|.|
T Consensus        10 l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~i~~~~~------~~~~g~~Hiaf~V   81 (154)
T cd07237          10 LGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGRHH--SLALAEG------PGPKRIHHLMLEV   81 (154)
T ss_pred             cCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCCCC--CEEEEcC------CCCceeEEEEEEc
Confidence            689999999999999999999999987653221   1133456666543322  2233221      1135789999999


Q ss_pred             CCHH---HHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcC
Q 024779           78 DDVA---KTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        78 ~d~~---~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                      +|.+   +++++|+++|+++..++...+.++.+++|+.||+|+.|||....
T Consensus        82 ~d~~~l~~~~~~L~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~~  132 (154)
T cd07237          82 TSLDDVGRAYDRVRARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWGG  132 (154)
T ss_pred             CCHHHHHHHHHHHHHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccCc
Confidence            8755   68999999999988766555545678899999999999998653

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.75  E-value=6.6e-17  Score=119.19  Aligned_cols=117  Identities=15%  Similarity=0.103  Sum_probs=85.6

Q ss_pred             CceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcc-cccCCceeEEEEEec
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD-YDKGNAYAQIAIGTD  208 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~i~~~v~  208 (262)
                      +++||+|.|+|++++++||+++|||++.....   .  .+.+...+ ...+..+.+........ .....++.|++|.|+
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~---~--~~~~~~~~-~~~~~~l~l~~~~~~~~~~~~~~~l~Hiaf~v~   74 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEG---D--RVRLEEGG-GGPGAVVDVLEEPDQPRGRPGAGTVHHVAFRVP   74 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeC---C--EEEEEecC-CCCCCEEEEEeCCCCCCCcccCCceEEEEEECC
Confidence            47899999999999999999999999976543   1  22233221 12356777766422211 112357889999998


Q ss_pred             C---HHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecc
Q 024779          209 D---VYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNV  255 (262)
Q Consensus       209 d---l~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  255 (262)
                      |   +++++++|+++|+++. .+....+  .+.+|++||+||.|||++..
T Consensus        75 d~~dvd~~~~~L~~~Gv~~~-~~~~~~~--~~s~yf~DPdG~~iEl~~~~  121 (157)
T cd08347          75 DDEELEAWKERLEALGLPVS-GIVDRFY--FKSLYFREPGGILFEIATDG  121 (157)
T ss_pred             CHHHHHHHHHHHHHCCCCcc-ccccccc--EEEEEEECCCCcEEEEEECC
Confidence            8   8999999999999864 3433333  57899999999999999865

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.74  E-value=4.8e-17  Score=116.13  Aligned_cols=118  Identities=31%  Similarity=0.509  Sum_probs=83.5

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCC-C-----CCCCCCceeEE
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD-K-----YDIGTGFGHFG   74 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~-----~~~~~~~~~i~   74 (262)
                      |+|++|.|+|++++++||+++|||++.............+++..++  .  .+++....... .     ...+.++.|+|
T Consensus         2 i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~--~--~i~l~~~~~~~~~~~~~~~~~~~g~~~i~   77 (128)
T TIGR03081         2 IDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALGN--T--KVELLEPLGEDSPIAKFLEKNGGGIHHIA   77 (128)
T ss_pred             CCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecCC--E--EEEEEecCCCCChHHHHHhcCCCceEEEE
Confidence            6899999999999999999999999876533333334455555442  2  34444321111 0     01245788999


Q ss_pred             EEeCCHHHHHHHHHHcCCeeecC-CcccCCCCeEEEEE--ECCCCCEEEEEE
Q 024779           75 IAVDDVAKTVELIKAKGGKVTRE-PGPVKGGNTVIAFI--EDPDGYKFELLE  123 (262)
Q Consensus        75 ~~v~d~~~~~~~l~~~G~~~~~~-~~~~~~~~~~~~~~--~DP~G~~iel~~  123 (262)
                      |.|+|+++++++|+++|+++..+ |....+ +.+.+++  +||||+.||+++
T Consensus        78 ~~v~di~~~~~~l~~~G~~~~~~~~~~~~~-g~~~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        78 IEVDDIEAALETLKEKGVRLIDEEPRIGAG-GKPVAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             EEcCCHHHHHHHHHHCCCcccCCCCccCCC-CCEEEEecccccCcEEEEecC
Confidence            99999999999999999998764 444333 4555666  699999999974

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.74  E-value=1.2e-16  Score=113.25  Aligned_cols=115  Identities=21%  Similarity=0.202  Sum_probs=84.6

Q ss_pred             EEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcc----cccCCceeEEEEEecC
Q 024779          134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD----YDKGNAYAQIAIGTDD  209 (262)
Q Consensus       134 v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~i~~~v~d  209 (262)
                      -.|.|+|++++++||+++|||++......+++......+..+    ...+.+........    ....++..+++|.|+|
T Consensus         3 p~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~d   78 (122)
T cd08355           3 PTLRYRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFG----DGGVMVGSVRDDYRASSARAGGAGTQGVYVVVDD   78 (122)
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEEC----CEEEEEecCCCcccccccccCCCceEEEEEEECC
Confidence            468899999999999999999998765333333333334432    12333433222111    1234577899999999


Q ss_pred             HHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEe
Q 024779          210 VYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVD  253 (262)
Q Consensus       210 l~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~  253 (262)
                      +++++++++++|+++..+|...++|. +.++++||+||.|+|.+
T Consensus        79 ~d~~~~~l~~~G~~v~~~~~~~~~g~-~~~~~~DPdG~~~~l~~  121 (122)
T cd08355          79 VDAHYERARAAGAEILREPTDTPYGS-REFTARDPEGNLWTFGT  121 (122)
T ss_pred             HHHHHHHHHHCCCEEeeCccccCCCc-EEEEEECCCCCEEEEec
Confidence            99999999999999999998888763 78899999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.74  E-value=1.7e-16  Score=113.85  Aligned_cols=116  Identities=28%  Similarity=0.424  Sum_probs=86.3

Q ss_pred             ceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCHH
Q 024779            2 LHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVA   81 (262)
Q Consensus         2 ~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~~   81 (262)
                      +||.|.|+|++++++||+++||+++......+ +.....|+..+....  .+.+....      ...++.|++|.|+|++
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~--~l~~~~~~------~~~~~~hl~~~v~d~~   71 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDP-GVDAAAFLRCDEDHH--DLALFPGP------ERPGLHHVAFEVESLD   71 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccC-CceeEEEEEcCCCcc--eEEEEcCC------CCCCeeEEEEEcCCHH
Confidence            69999999999999999999999987654322 223456666654322  33433221      1457889999999864


Q ss_pred             ---HHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCC
Q 024779           82 ---KTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  126 (262)
Q Consensus        82 ---~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~  126 (262)
                         ++++++.++|+++..++.....+..++++|.||+|+.|||.+..+
T Consensus        72 ~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~~~  119 (131)
T cd08343          72 DILRAADRLAANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAEMY  119 (131)
T ss_pred             HHHHHHHHHHHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcCCc
Confidence               688999999999887665544445678899999999999997654

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.74  E-value=5.1e-17  Score=114.92  Aligned_cols=115  Identities=23%  Similarity=0.202  Sum_probs=84.2

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEe-
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGT-  207 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v-  207 (262)
                      .++.|+.|.|+|++++++||+++|||++.....      ...++........+.+.+..       ...++..|++|.| 
T Consensus         3 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~-------~~~~~~~hi~~~v~   69 (121)
T cd07266           3 LRLGHVELRVTDLEKSREFYVDVLGLVETEEDD------DRIYLRGLEEFIHHSLVLTK-------APVAGLGHIAFRVR   69 (121)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeccCC------CeEEEEecCCCceEEEEEee-------CCCCceeEEEEECC
Confidence            468999999999999999999999999865421      12333321112334444432       1235788999998 


Q ss_pred             --cCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          208 --DDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       208 --~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                        +|+++++++++++|+++...|.....+.++.+|+.||+||.||++...+
T Consensus        70 ~~~dv~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~~~  120 (121)
T cd07266          70 SEEDLDKAEAFFQELGLPTEWVEAGEEPGQGRALRVEDPLGFPIEFYAEMD  120 (121)
T ss_pred             CHHHHHHHHHHHHHcCCCcccccCCcCCCCccEEEEECCCCCEEEEEeccc
Confidence              5899999999999999987654444443478999999999999997654

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.74  E-value=9.9e-17  Score=116.21  Aligned_cols=116  Identities=22%  Similarity=0.295  Sum_probs=85.2

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEec
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTD  208 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~  208 (262)
                      .++.|+.|.|+|++++++||+++|||++.....      ...++..+    +..+.+.............+..|++|.++
T Consensus         3 ~~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~----g~~l~l~~~~~~~~~~~~~~~~hiaf~v~   72 (139)
T PRK04101          3 KGINHICFSVSNLEKSIEFYEKVLGAKLLVKGR------KTAYFDLN----GLWIALNEEKDIPRNEIHQSYTHIAFSIE   72 (139)
T ss_pred             CcEEEEEEEecCHHHHHHHHHhccCCEEEeecC------eeEEEecC----CeEEEeeccCCCCCccCCCCeeEEEEEec
Confidence            468999999999999999999999999875421      22333322    24454443221111122346789999987


Q ss_pred             --CHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecc
Q 024779          209 --DVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNV  255 (262)
Q Consensus       209 --dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  255 (262)
                        |+++++++++++|+++..+|...+++ ++.+|++||+||.|||.+..
T Consensus        73 ~~dv~~~~~~l~~~G~~i~~~~~~~~~~-~~~~~~~DPdGn~iEl~~~~  120 (139)
T PRK04101         73 EEDFDHWYQRLKENDVNILPGRERDERD-KKSIYFTDPDGHKFEFHTGT  120 (139)
T ss_pred             HHHHHHHHHHHHHCCceEcCCccccCCC-ceEEEEECCCCCEEEEEeCC
Confidence              99999999999999998777665543 48999999999999998743

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.74  E-value=2.1e-16  Score=110.47  Aligned_cols=114  Identities=25%  Similarity=0.247  Sum_probs=82.8

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCH
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDV   80 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~   80 (262)
                      ++||+|.|+|++++++||+++||+++..... +..  ..+++..++. .  ...+.......  .......|++|.++|+
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~-~~~--~~~~~~~~~~-~--~~~~~~~~~~~--~~~~~~~~~~f~v~di   72 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGD-GGG--DYAVFSTGGG-A--VGGLMKAPEPA--AGSPPGWLVYFAVDDV   72 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccC-CCC--ceEEEEeCCc-c--EEEEecCCCCC--CCCCCeEEEEEEeCCH
Confidence            5799999999999999999999999876542 111  2334444321 1  22232221111  2234566899999999


Q ss_pred             HHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEE
Q 024779           81 AKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  123 (262)
Q Consensus        81 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~  123 (262)
                      ++++++|+++|+++..+|...+ +..+.+++.||+||.|+|++
T Consensus        73 ~~~~~~l~~~g~~~~~~~~~~~-~~~~~~~~~DPdG~~~~l~~  114 (114)
T cd07247          73 DAAAARVEAAGGKVLVPPTDIP-GVGRFAVFADPEGAVFGLWQ  114 (114)
T ss_pred             HHHHHHHHHCCCEEEeCCcccC-CcEEEEEEECCCCCEEEeEC
Confidence            9999999999999988876655 35688999999999999974

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.74  E-value=2.4e-16  Score=116.25  Aligned_cols=117  Identities=20%  Similarity=0.223  Sum_probs=83.7

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCC-CCCCCCceeEEEEeCC
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDK-YDIGTGFGHFGIAVDD   79 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~i~~~v~d   79 (262)
                      |+||+|.|+|++++.+||+++|||++..+..   .  ...+...+. ..+..+.+........ .....++.|++|.|+|
T Consensus         2 l~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~---~--~~~~~~~~~-~~~~~l~l~~~~~~~~~~~~~~~l~Hiaf~v~d   75 (157)
T cd08347           2 LHGVTLTVRDPEATAAFLTDVLGFREVGEEG---D--RVRLEEGGG-GPGAVVDVLEEPDQPRGRPGAGTVHHVAFRVPD   75 (157)
T ss_pred             cccEEEEeCCHHHHHHHHHHhcCCEEEeeeC---C--EEEEEecCC-CCCCEEEEEeCCCCCCCcccCCceEEEEEECCC
Confidence            6899999999999999999999999876543   1  233333221 1223556655322221 1223578899999998


Q ss_pred             ---HHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCC
Q 024779           80 ---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  126 (262)
Q Consensus        80 ---~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~  126 (262)
                         +++++++|+++|+.+. .+.  ..+..+++||.||+|+.|||+...+
T Consensus        76 ~~dvd~~~~~L~~~Gv~~~-~~~--~~~~~~s~yf~DPdG~~iEl~~~~~  122 (157)
T cd08347          76 DEELEAWKERLEALGLPVS-GIV--DRFYFKSLYFREPGGILFEIATDGP  122 (157)
T ss_pred             HHHHHHHHHHHHHCCCCcc-ccc--ccccEEEEEEECCCCcEEEEEECCC
Confidence               8999999999999764 222  2235678999999999999998753

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=99.73  E-value=1.5e-16  Score=125.74  Aligned_cols=222  Identities=20%  Similarity=0.241  Sum_probs=146.9

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCC--CCCCCceeEEEEeC
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKY--DIGTGFGHFGIAVD   78 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~i~~~v~   78 (262)
                      +++|.+.|.|.+.+..=|-..|||+....-...    .....+-|  ...+++.-...+....+  .+|++.+.++|.|+
T Consensus        23 feFvEf~~~d~~~~l~~l~~~lGF~~~~~Hrsk----~v~l~rQG--dinlvvn~~~~s~a~~f~~~Hgps~~a~a~~V~   96 (363)
T COG3185          23 FEFVEFAVPDPQEALGALLGQLGFTAVAKHRSK----AVTLYRQG--DINLVVNAEPDSFAAEFLDKHGPSACAMAFRVD   96 (363)
T ss_pred             eeEEEEecCCHHHHHHHHHHHhCcccccccccc----ceeEEEeC--CEEEEEcCCCcchhhHHHHhcCCchheeEEeeC
Confidence            478999999995444444455999887543211    12222222  22222221111111121  26788899999999


Q ss_pred             CHHHHHHHHHHcCCeeecCCcc-----c---CCCCeEEEEEECCCC--CEE--EEEEc--CCC-----CCCceeEEeeec
Q 024779           79 DVAKTVELIKAKGGKVTREPGP-----V---KGGNTVIAFIEDPDG--YKF--ELLER--GPT-----PEPLCQVMLRVG  139 (262)
Q Consensus        79 d~~~~~~~l~~~G~~~~~~~~~-----~---~~~~~~~~~~~DP~G--~~i--el~~~--~~~-----~~~~~~v~l~v~  139 (262)
                      |.++++++.++.|++....+..     .   ..-++..+||.|..|  -.|  ++...  ...     ...|+|++++|+
T Consensus        97 DA~~A~a~A~a~gA~~~~~~~g~~e~~ipai~giggsllyfvd~~~~~siyd~~f~~~~~~~~~~~~g~~~IDHl~~nv~  176 (363)
T COG3185          97 DAEQALARALALGARTIDTEIGAGEVDIPAIRGIGGSLLYFVDRYGGRSIYDVEFEPNGAQGASGGVGLTAIDHLTHNVK  176 (363)
T ss_pred             CHHHHHHHHHHcCCccccCCCCCccccccceeccCCcEEEEeccCCCCcccccccccccccccccccCceeechhhhhcc
Confidence            9999999999999955433221     1   112456788888883  222  11111  111     137999999997


Q ss_pred             --ChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcc-------cccCCceeEEEEEecCH
Q 024779          140 --DLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD-------YDKGNAYAQIAIGTDDV  210 (262)
Q Consensus       140 --d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-------~~~~~~~~~i~~~v~dl  210 (262)
                        .++++..||+++|||+.....+.++....+..-.+.+.++...+.|....+..+       ...|.|++||+|.++|+
T Consensus       177 ~~~md~w~~FY~~if~~~~~~~fdi~~p~tgl~Sram~Sp~G~vrlplN~s~~~~sqi~efl~~y~G~GIQHIA~~T~dI  256 (363)
T COG3185         177 AGQMDTWVLFYESLFGFREIQYFDIPGPITGLRSRAMVSPCGKVRLPLNESADDKSQIGEFLREYRGEGIQHIAFGTDDI  256 (363)
T ss_pred             hhhHHHHHHHHHHHhCccceeeEeccCCcccEEEeeEecCCCcEEeecccCCCchhHHHHHHHHhCCCcceEEEecccHH
Confidence              999999999999999998877665544334444444455667777776544433       33578999999999999


Q ss_pred             HHHHHHHHHhCCeeecCC
Q 024779          211 YKTAEAIKLFGGKVTREP  228 (262)
Q Consensus       211 ~~~~~~l~~~g~~~~~~~  228 (262)
                      -+++++++++|++++..|
T Consensus       257 ~~tv~~lr~rG~~fl~ip  274 (363)
T COG3185         257 YATVAALRERGVKFLPIP  274 (363)
T ss_pred             HHHHHHHHHcCCccCCCc
Confidence            999999999999999877

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.73  E-value=1.8e-16  Score=115.34  Aligned_cols=116  Identities=15%  Similarity=0.293  Sum_probs=86.5

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEec
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTD  208 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~  208 (262)
                      .++.|+.|.|+|++++++||+++|||++.....  +   ...++..+.  .+..+.+...       ..+++.|++|.|+
T Consensus         3 ~~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~--~---~~~~l~~~~--~~~~~~l~~~-------~~~~~~hiaf~v~   68 (144)
T cd07239           3 VKISHVVLNSPDVDKTVAFYEDVLGFRVSDWLG--D---QMAFLRCNS--DHHSIAIARG-------PHPSLNHVAFEMP   68 (144)
T ss_pred             ceeeEEEEECCCHHHHHHHHHhcCCCEEEEeeC--C---eEEEEECCC--CcceEEEccC-------CCCceEEEEEECC
Confidence            478999999999999999999999999864421  1   223444332  2344555321       2357889999999


Q ss_pred             CHHHHH---HHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccccc
Q 024779          209 DVYKTA---EAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDFL  258 (262)
Q Consensus       209 dl~~~~---~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~~  258 (262)
                      |++++.   ++|+++|+++..+|.....+..+++|++||+||.|||++.....
T Consensus        69 d~~~l~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~~~~~  121 (144)
T cd07239          69 SIDEVMRGIGRMIDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSELEQV  121 (144)
T ss_pred             CHHHHHHHHHHHHHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccCceEE
Confidence            888775   89999999998776555444457789999999999999876543

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.73  E-value=1e-16  Score=113.17  Aligned_cols=113  Identities=16%  Similarity=0.253  Sum_probs=80.4

Q ss_pred             CceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEee----ecCCcccccCCceeEEEE
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTY----NYGVTDYDKGNAYAQIAI  205 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~i~~  205 (262)
                      ++.++.|.|+|++++.+||+++|||++.....  .  . ..+ .  +   ...+.+..    .....+...+.+..|++|
T Consensus         2 ~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~--~--~-~~~-~--~---~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~   70 (120)
T cd09011           2 KFKNPLLVVKDIEKSKKFYEKVLGLKVVMDFG--E--N-VTF-E--G---GFALQEGYSWLEGISKADIIEKSNNFELYF   70 (120)
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCEEeeccC--c--e-EEE-e--c---cceeccchhhhccCCcccccccCCceEEEE
Confidence            46789999999999999999999999864321  1  1 111 1  0   01111110    000111223345689999


Q ss_pred             EecCHHHHHHHHHHhCC-eeecCCccCCCCcceEEEEeCCCCcEEEEEec
Q 024779          206 GTDDVYKTAEAIKLFGG-KVTREPGPLPGINTKITACLDPDGWKTVFVDN  254 (262)
Q Consensus       206 ~v~dl~~~~~~l~~~g~-~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  254 (262)
                      .|+|+++++++|+++|+ ++..+|...++| .+.++++|||||.|||.+.
T Consensus        71 ~v~dvd~~~~~l~~~g~~~~~~~~~~~~~g-~r~~~~~DPdGn~iei~~~  119 (120)
T cd09011          71 EEEDFDAFLDKLKRYDNIEYVHPIKEHPWG-QRVVRFYDPDKHIIEVGES  119 (120)
T ss_pred             EehhhHHHHHHHHhcCCcEEecCcccCCCc-cEEEEEECCCCCEEEEecc
Confidence            99999999999999986 788888888876 3899999999999999875

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.73  E-value=1.8e-17  Score=118.10  Aligned_cols=119  Identities=29%  Similarity=0.415  Sum_probs=82.1

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecC--CCCcceeeEeeecCCCceeEEEeeecCCCCCCCC---CCCceeEEE
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDI--PEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDI---GTGFGHFGI   75 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~i~~   75 (262)
                      |+||+|.|+|++++.+||+++|||++......  ........++..+..  .+.+.............   ..+..|+++
T Consensus         2 l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~i~~   79 (128)
T PF00903_consen    2 LDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGEG--HIELFLNPSPPPRASGHSFPEHGGHHIAF   79 (128)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTSS--CEEEEEEESSSSSSEEEHHHSHTSEEEEE
T ss_pred             eEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeeccccc--ceeeeeeccccccccccccccccceeEEE
Confidence            68999999999999999999999999987652  222333444444433  33333333222111111   013455666


Q ss_pred             EeC---CHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEE
Q 024779           76 AVD---DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL  121 (262)
Q Consensus        76 ~v~---d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel  121 (262)
                      .+.   |+++++++|+++|+++..++.....+...++|+.||+|+.|||
T Consensus        80 ~~~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   80 LAFDVDDLDAAYERLKAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             EESSHHHHHHHHHHHHHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             EeccHHHHHHHHHHHhhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            555   6888999999999999888777666666767899999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.73  E-value=2.3e-16  Score=113.17  Aligned_cols=118  Identities=18%  Similarity=0.239  Sum_probs=88.2

Q ss_pred             eeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecCHH
Q 024779          132 CQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVY  211 (262)
Q Consensus       132 ~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~dl~  211 (262)
                      +||.|.|+|++++++||+++||+++......+ +.....++..++  .+..+.+....      ..++..|++|.|+|++
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~--~~~~l~~~~~~------~~~~~~hl~~~v~d~~   71 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDP-GVDAAAFLRCDE--DHHDLALFPGP------ERPGLHHVAFEVESLD   71 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccC-CceeEEEEEcCC--CcceEEEEcCC------CCCCeeEEEEEcCCHH
Confidence            58999999999999999999999987654322 222334444332  23445554311      1568899999999874


Q ss_pred             ---HHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccccc
Q 024779          212 ---KTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDFL  258 (262)
Q Consensus       212 ---~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~~  258 (262)
                         +++++++++|+++...|...+.+..++++++||+||.|||.+.....
T Consensus        72 ~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~~~~~  121 (131)
T cd08343          72 DILRAADRLAANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAEMYRI  121 (131)
T ss_pred             HHHHHHHHHHHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcCCccc
Confidence               68899999999999887766655567899999999999999876543

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.72  E-value=3.1e-16  Score=110.23  Aligned_cols=116  Identities=27%  Similarity=0.348  Sum_probs=83.2

Q ss_pred             eEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCc-eeEEEeeecCCCC--CCCCCCCceeEEEEeCC
Q 024779            3 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDS-HFVIELTYNYGVD--KYDIGTGFGHFGIAVDD   79 (262)
Q Consensus         3 hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~--~~~~~~~~~~i~~~v~d   79 (262)
                      ||+|.|+|++++.+||+++|||++..+..... .  ..++.+..... ...+.+.......  ....+.+..|++|.|+|
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~-~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~d   77 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGG-G--FRWVTVAPPGSPETSLVLAPPANPAAMSGLQPGGTPGLVLATDD   77 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCC-C--cEEEEEeCCCCCeeEEEEeCCCCccccccccCCCceEEEEEehH
Confidence            89999999999999999999999987653212 2  22333322211 3344544332221  11234577799999999


Q ss_pred             HHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEE
Q 024779           80 VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  123 (262)
Q Consensus        80 ~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~  123 (262)
                      +++++++|+++|+++..++....  ..+.+++.||+|++|+|++
T Consensus        78 i~~~~~~l~~~g~~~~~~~~~~~--~~~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          78 IDATYEELKARGVEFSEEPREMP--YGTVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             HHHHHHHHHhCCCEEeeccccCC--CceEEEEECCCCCEEEEeC
Confidence            99999999999999987774333  4578999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.72  E-value=4e-16  Score=110.88  Aligned_cols=117  Identities=19%  Similarity=0.272  Sum_probs=79.1

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeee---c---CC--CCCCCCCCCcee
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTY---N---YG--VDKYDIGTGFGH   72 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~---~~--~~~~~~~~~~~~   72 (262)
                      |.|+.|.|+|++++.+||+++|||++.....  .+.+  ..+..+  ...+.+....   .   ..  ........+..+
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~--~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYERAFGFERRFLHE--SGDY--GELETG--ETTLAFASHDLAESNLKGGFVKADPAQPPAGFE   74 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHHhhCCeEEeecC--CCcE--EEecCC--cEEEEEEcccccccccccCccCCccccCCCcEE
Confidence            6799999999999999999999999865432  1111  111111  1111111110   0   00  011112223458


Q ss_pred             EEEEeCCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEc
Q 024779           73 FGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  124 (262)
Q Consensus        73 i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  124 (262)
                      ++|.|+|+++++++++++|+++..++...++ +.+.+++.||+||.|++.++
T Consensus        75 ~~~~v~di~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~~~~~~~  125 (125)
T cd07264          75 IAFVTDDVAAAFARAVEAGAVLVSEPKEKPW-GQTVAYVRDINGFLIELCSP  125 (125)
T ss_pred             EEEEcCCHHHHHHHHHHcCCEeccCCccCCC-CcEEEEEECCCCCEEEEecC
Confidence            9999999999999999999999888776665 45678899999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.72  E-value=1e-16  Score=111.72  Aligned_cols=113  Identities=25%  Similarity=0.217  Sum_probs=82.2

Q ss_pred             ceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcc-cccCCceeEEEEEecC
Q 024779          131 LCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD-YDKGNAYAQIAIGTDD  209 (262)
Q Consensus       131 ~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~i~~~v~d  209 (262)
                      |+|+.|.|+|++++++||+++|||++......+   ....++..++   ...+.+........ .....+..|++|.|+|
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~---~~~~~~~~~~---~~~i~l~~~~~~~~~~~~~~~~~~~~~~v~d   74 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFL---FPGAWLYAGD---GPQLHLIEEDPPDALPEGPGRDDHIAFRVDD   74 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCC---CCceEEEeCC---CcEEEEEecCCCccccCCCcccceEEEEeCC
Confidence            689999999999999999999999986543322   1223344322   13455554332211 1234577899999999


Q ss_pred             HHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEE
Q 024779          210 VYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVF  251 (262)
Q Consensus       210 l~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~  251 (262)
                      +++++++++++|+++..++.. ..+ .+.+|++||+|+.|||
T Consensus        75 ~~~~~~~l~~~g~~~~~~~~~-~~~-~~~~~~~DP~G~~iE~  114 (114)
T cd07245          75 LDAFRARLKAAGVPYTESDVP-GDG-VRQLFVRDPDGNRIEL  114 (114)
T ss_pred             HHHHHHHHHHcCCCcccccCC-CCC-ccEEEEECCCCCEEeC
Confidence            999999999999999987754 222 4789999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.72  E-value=4.6e-16  Score=115.96  Aligned_cols=118  Identities=20%  Similarity=0.324  Sum_probs=83.2

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCC-
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD-   79 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d-   79 (262)
                      |+||+|.|+|++++++||+++|||++........+.....|+.......  .+.+.....    ....++.|++|.|+| 
T Consensus         7 i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~l~~~~~----~~~~~~~hiaf~v~~~   80 (166)
T cd09014           7 LDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSNKVH--DVAYTRDPA----GARGRLHHLAYALDTR   80 (166)
T ss_pred             eeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCCCce--eEEEecCCC----CCCCCceEEEEECCCH
Confidence            5899999999999999999999999876543222222345665543222  233322111    122467899999996 


Q ss_pred             --HHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEc
Q 024779           80 --VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  124 (262)
Q Consensus        80 --~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  124 (262)
                        +++++++|+++|+++...|.....+...++|+.||+|++|||+..
T Consensus        81 ~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  127 (166)
T cd09014          81 EDVLRAADIFLENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGG  127 (166)
T ss_pred             HHHHHHHHHHHHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEc
Confidence              557889999999998656554443345578999999999999976

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.72  E-value=1.6e-16  Score=113.85  Aligned_cols=114  Identities=22%  Similarity=0.262  Sum_probs=81.6

Q ss_pred             ceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEec--
Q 024779          131 LCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTD--  208 (262)
Q Consensus       131 ~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~--  208 (262)
                      |+||.|.|+|++++++||+++|||++.....  .  .  .++..+    +..+.+.............++.|++|.++  
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~~--~--~--~~~~~~----~~~l~l~~~~~~~~~~~~~~~~hiaf~v~~~   70 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVLGE--K--T--AYFTIG----GTWLALNEEPDIPRNEIRQSYTHIAFTIEDS   70 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEeccCC--c--c--ceEeeC----ceEEEEEccCCCCcCCcCccceEEEEEecHH
Confidence            6899999999999999999999999864321  1  1  223322    24455543322111122347889999987  


Q ss_pred             CHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecc
Q 024779          209 DVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNV  255 (262)
Q Consensus       209 dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  255 (262)
                      |+++++++|+++|+++..++....++ ++.+|++||+||.|||.+..
T Consensus        71 dld~~~~~l~~~G~~~~~~~~~~~~~-~~~~~f~DPdG~~iEl~~~~  116 (131)
T cd08363          71 EFDAFYTRLKEAGVNILPGRKRDVRD-RKSIYFTDPDGHKLEVHTGT  116 (131)
T ss_pred             HHHHHHHHHHHcCCcccCCCccccCc-ceEEEEECCCCCEEEEecCc
Confidence            49999999999999987655433332 47899999999999999854

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.72  E-value=1.5e-16  Score=112.95  Aligned_cols=113  Identities=16%  Similarity=0.189  Sum_probs=83.4

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEec
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTD  208 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~  208 (262)
                      .++.|++|.|+|++++.+||+++|||++..+..      ...++..+.  .++.+.+...        .++..|++|.|+
T Consensus         5 ~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~--~~~~i~l~~~--------~~~~~~iaf~v~   68 (124)
T cd08361           5 QDIAYVRLGTRDLAGATRFATDILGLQVAERTA------KATYFRSDA--RDHTLVYIEG--------DPAEQASGFELR   68 (124)
T ss_pred             EEeeEEEEeeCCHHHHHHHHHhccCceeccCCC------CeEEEEcCC--ccEEEEEEeC--------CCceEEEEEEEC
Confidence            468999999999999999999999999865421      123454322  3455555421        145679999997


Q ss_pred             C---HHHHHHHHHHhCCeeecCCccCC--CCcceEEEEeCCCCcEEEEEecccc
Q 024779          209 D---VYKTAEAIKLFGGKVTREPGPLP--GINTKITACLDPDGWKTVFVDNVDF  257 (262)
Q Consensus       209 d---l~~~~~~l~~~g~~~~~~~~~~~--~~~~~~~~~~DP~G~~ie~~~~~~~  257 (262)
                      +   +++++++|+++|+++..++....  .+.++++|++|||||.||++.++..
T Consensus        69 ~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~~~~  122 (124)
T cd08361          69 DDDALESAATELEQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVRPSH  122 (124)
T ss_pred             CHHHHHHHHHHHHHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEeeec
Confidence            5   99999999999999877653211  2224678999999999999987754

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.72  E-value=2.1e-16  Score=111.59  Aligned_cols=112  Identities=18%  Similarity=0.212  Sum_probs=78.3

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeee----cCCCCCCCCCCCceeEEEE
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTY----NYGVDKYDIGTGFGHFGIA   76 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~i~~~   76 (262)
                      +.|+.|.|+|++++.+||+++||+++....+  .    ...+. +.    +.+.+..    .....+...+.+..|++|.
T Consensus         3 ~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~--~----~~~~~-~~----~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~   71 (120)
T cd09011           3 FKNPLLVVKDIEKSKKFYEKVLGLKVVMDFG--E----NVTFE-GG----FALQEGYSWLEGISKADIIEKSNNFELYFE   71 (120)
T ss_pred             EEEEEEEECCHHHHHHHHHHhcCCEEeeccC--c----eEEEe-cc----ceeccchhhhccCCcccccccCCceEEEEE
Confidence            4789999999999999999999999864321  1    11111 11    1111110    1111112233455789999


Q ss_pred             eCCHHHHHHHHHHcCC-eeecCCcccCCCCeEEEEEECCCCCEEEEEEc
Q 024779           77 VDDVAKTVELIKAKGG-KVTREPGPVKGGNTVIAFIEDPDGYKFELLER  124 (262)
Q Consensus        77 v~d~~~~~~~l~~~G~-~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  124 (262)
                      |+|+++++++|+++|+ ++..+|...++ +.+.++|.|||||.|||.++
T Consensus        72 v~dvd~~~~~l~~~g~~~~~~~~~~~~~-g~r~~~~~DPdGn~iei~~~  119 (120)
T cd09011          72 EEDFDAFLDKLKRYDNIEYVHPIKEHPW-GQRVVRFYDPDKHIIEVGES  119 (120)
T ss_pred             ehhhHHHHHHHHhcCCcEEecCcccCCC-ccEEEEEECCCCCEEEEecc
Confidence            9999999999999986 67777777665 56789999999999999875

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.72  E-value=2.7e-16  Score=117.17  Aligned_cols=120  Identities=20%  Similarity=0.167  Sum_probs=85.2

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEec
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTD  208 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~  208 (262)
                      .+++|+.|.|+|++++++||+++|||++......+.+.....++....  ....+.+....    .....++.|++|.|+
T Consensus         5 ~~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~l~~~~----~~~~~~~~hiaf~v~   78 (166)
T cd09014           5 RRLDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSN--KVHDVAYTRDP----AGARGRLHHLAYALD   78 (166)
T ss_pred             ceeeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCC--CceeEEEecCC----CCCCCCceEEEEECC
Confidence            468999999999999999999999999876543332222233444321  23344443211    112346899999998


Q ss_pred             C---HHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEec
Q 024779          209 D---VYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDN  254 (262)
Q Consensus       209 d---l~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  254 (262)
                      |   +++++++|+++|+++..+|..+..+...++|++||+||.|||+..
T Consensus        79 ~~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  127 (166)
T cd09014          79 TREDVLRAADIFLENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGG  127 (166)
T ss_pred             CHHHHHHHHHHHHHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEc
Confidence            5   457889999999998877766554444578999999999999987

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.72  E-value=1.9e-16  Score=112.03  Aligned_cols=112  Identities=18%  Similarity=0.166  Sum_probs=81.6

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEec
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTD  208 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~  208 (262)
                      .+++|+.|.|+|++++.+||+++|||++..+..      ...++...+...+..+.+..       ...++..|++|.+.
T Consensus         5 ~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~------~~~~l~~~~~~~~~~~~l~~-------~~~~~~~h~af~v~   71 (121)
T cd09013           5 AHLAHVELLTPKPEESLWFFTDVLGLEETGREG------QSVYLRAWGDYEHHSLKLTE-------SPEAGLGHIAWRAS   71 (121)
T ss_pred             cEeeEEEEEeCCHHHHHHHHHhCcCCEEEeecC------CeEEEEeccCCCccEEEEee-------CCCCceEEEEEEcC
Confidence            478999999999999999999999999876532      12333322222334454432       12357899999996


Q ss_pred             ---CHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecc
Q 024779          209 ---DVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNV  255 (262)
Q Consensus       209 ---dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  255 (262)
                         +++++.++++++|+++...+....+  ++.+|++||+||.||++...
T Consensus        72 ~~~~v~~~~~~l~~~G~~~~~~~~~~~~--~~~~~~~DPdG~~iEl~~~~  119 (121)
T cd09013          72 SPEALERRVAALEASGLGIGWIEGDPGH--GKAYRFRSPDGHPMELYWEV  119 (121)
T ss_pred             CHHHHHHHHHHHHHcCCccccccCCCCC--cceEEEECCCCCEEEEEEec
Confidence               6889999999999997543333333  46789999999999998754

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.72  E-value=2.7e-16  Score=111.79  Aligned_cols=115  Identities=23%  Similarity=0.285  Sum_probs=81.6

Q ss_pred             ceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeec--------C--CcccccCCce
Q 024779          131 LCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNY--------G--VTDYDKGNAY  200 (262)
Q Consensus       131 ~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--------~--~~~~~~~~~~  200 (262)
                      +.|+.|.|+|++++++||+++|||++.....  +..+  ..+..    +...+.+....        .  .......++.
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~--~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYERAFGFERRFLHE--SGDY--GELET----GETTLAFASHDLAESNLKGGFVKADPAQPPAG   72 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHHhhCCeEEeecC--CCcE--EEecC----CcEEEEEEcccccccccccCccCCccccCCCc
Confidence            4689999999999999999999999865322  1112  11221    11222222110        0  0011123455


Q ss_pred             eEEEEEecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEec
Q 024779          201 AQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDN  254 (262)
Q Consensus       201 ~~i~~~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  254 (262)
                      .+++|.|+|+++++++++++|+++..+|...++|. +.++++||+||.|+|+++
T Consensus        73 ~~~~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~-~~~~~~DPdG~~~~~~~~  125 (125)
T cd07264          73 FEIAFVTDDVAAAFARAVEAGAVLVSEPKEKPWGQ-TVAYVRDINGFLIELCSP  125 (125)
T ss_pred             EEEEEEcCCHHHHHHHHHHcCCEeccCCccCCCCc-EEEEEECCCCCEEEEecC
Confidence            79999999999999999999999998888888764 788999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.72  E-value=2.1e-16  Score=110.14  Aligned_cols=113  Identities=28%  Similarity=0.354  Sum_probs=82.3

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCC-CCCCCCceeEEEEeCC
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDK-YDIGTGFGHFGIAVDD   79 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~i~~~v~d   79 (262)
                      |+|++|.|+|++++.+||+++||+++..+....   ....++..++.   ..+.+........ ...+.+..|++|.|+|
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~---~~~~~~~~~~~---~~i~l~~~~~~~~~~~~~~~~~~~~~~v~d   74 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFL---FPGAWLYAGDG---PQLHLIEEDPPDALPEGPGRDDHIAFRVDD   74 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCC---CCceEEEeCCC---cEEEEEecCCCccccCCCcccceEEEEeCC
Confidence            689999999999999999999999886543211   13456655443   1334443222111 1234567899999999


Q ss_pred             HHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEE
Q 024779           80 VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL  121 (262)
Q Consensus        80 ~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel  121 (262)
                      +++++++++++|+++..++.. .. +.+.+++.||+|+.+||
T Consensus        75 ~~~~~~~l~~~g~~~~~~~~~-~~-~~~~~~~~DP~G~~iE~  114 (114)
T cd07245          75 LDAFRARLKAAGVPYTESDVP-GD-GVRQLFVRDPDGNRIEL  114 (114)
T ss_pred             HHHHHHHHHHcCCCcccccCC-CC-CccEEEEECCCCCEEeC
Confidence            999999999999998876644 22 45778999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.72  E-value=2.8e-16  Score=110.73  Aligned_cols=112  Identities=20%  Similarity=0.173  Sum_probs=80.7

Q ss_pred             eEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCc----ccccCCceeEEEEEec
Q 024779          133 QVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVT----DYDKGNAYAQIAIGTD  208 (262)
Q Consensus       133 ~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~~~~~~~~i~~~v~  208 (262)
                      +..|.|+|++++++||+++|||++.....      ....+...+  ....+.+.......    .........|++|.|+
T Consensus         4 ~~~l~v~D~~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~--~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~v~   75 (119)
T cd08359           4 YPVIVTDDLAETADFYVRHFGFTVVFDSD------WYVSLRSPD--GGVELAFMLPGHETVPAAQYQFQGQGLILNFEVD   75 (119)
T ss_pred             eeEEEECCHHHHHHHHHHhhCcEEEeccC------cEEEEecCC--CceEEEEccCCCCCCcchhcccCCceEEEEEEEC
Confidence            57899999999999999999999875421      112232221  22444444321111    1112234459999999


Q ss_pred             CHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEe
Q 024779          209 DVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVD  253 (262)
Q Consensus       209 dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~  253 (262)
                      |+++++++++++|+++..+|...++| .+.++++||+||.|||+|
T Consensus        76 did~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DP~G~~ie~~~  119 (119)
T cd08359          76 DVDAEYERLKAEGLPIVLPLRDEPWG-QRHFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             CHHHHHHHHHhcCCCeeeccccCCCc-ceEEEEECCCCCEEEEEC
Confidence            99999999999999998888777775 488999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.71  E-value=3.4e-16  Score=111.66  Aligned_cols=118  Identities=25%  Similarity=0.362  Sum_probs=86.1

Q ss_pred             ceeEEeeecChhhhHHHHHHhcCCeeeeeccCc-CccceeeeeccCCCCcceEEEEeeecCCcc------cccCCceeEE
Q 024779          131 LCQVMLRVGDLDRSINFYEQAFGMELLRKRDNP-EYKYTIAMMGYGPEDKNVVLELTYNYGVTD------YDKGNAYAQI  203 (262)
Q Consensus       131 ~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~------~~~~~~~~~i  203 (262)
                      ++||.|.|+|++++++||+++|||++....... +......++..    +...+++........      ...+++..|+
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~----~~~~l~l~~~~~~~~~~~~~~~~~~~g~~h~   76 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGL----GNVQIELIEPLDDDSPIAKFLEKRGEGLHHI   76 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEc----CCEEEEEEEECCCCCcHHHHHhcCCCceEEE
Confidence            579999999999999999999999997654432 22334455553    245666665432211      1345788999


Q ss_pred             EEEecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeC-CC--CcEEEEEe
Q 024779          204 AIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLD-PD--GWKTVFVD  253 (262)
Q Consensus       204 ~~~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~D-P~--G~~ie~~~  253 (262)
                      +|.|+|+++++++++++|+++..+|.....+. +.+++.| |+  |+.|||+|
T Consensus        77 ~f~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g-~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          77 AFEVDDIDAALARLKAQGVRLLQEGPRIGAGG-KRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             EEEeCCHHHHHHHHHHCCCeeeccCCCccCCC-CEEEEEecCCCceEEEEecC
Confidence            99999999999999999999998876444433 4455555 44  99999975

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.71  E-value=2.3e-16  Score=112.21  Aligned_cols=120  Identities=19%  Similarity=0.221  Sum_probs=83.4

Q ss_pred             CceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCc-cceeeeeccCCCCcceEEEEeeecCCcc--cccCCceeEEEEE
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEY-KYTIAMMGYGPEDKNVVLELTYNYGVTD--YDKGNAYAQIAIG  206 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~i~~~  206 (262)
                      ++.|+.|.|.|++++++||+++|||++.......+. .....++.......+..++|........  .....+..|++|.
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~hi~f~   80 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDAGPKGRRGPGQIHHIAFS   80 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCCCCCCCCCCCCcEEEEEEE
Confidence            478999999999999999999999998766432221 1112233222112345666665433221  1123467899999


Q ss_pred             ec---CHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEE
Q 024779          207 TD---DVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFV  252 (262)
Q Consensus       207 v~---dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~  252 (262)
                      |.   |+++++++++++|+++..++. ..+  ++.+|++||+||+|||+
T Consensus        81 v~~~~~~~~~~~~~~~~g~~~~~~~~-~~~--~~~~~~~DP~G~~iE~~  126 (126)
T cd08346          81 VPSEASLDAWRERLRAAGVPVSGVVD-HFG--ERSIYFEDPDGLRLELT  126 (126)
T ss_pred             cCCHHHHHHHHHHHHHcCCcccceEe-ecc--eEEEEEECCCCCEEEeC
Confidence            98   579999999999999876443 222  58899999999999985

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>PRK06724 hypothetical protein; Provisional

Probab=99.71  E-value=2.4e-16  Score=112.09  Aligned_cols=113  Identities=17%  Similarity=0.188  Sum_probs=78.8

Q ss_pred             CCCceeEEeeecChhhhHHHHHHhc---CCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEE
Q 024779          128 PEPLCQVMLRVGDLDRSINFYEQAF---GMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIA  204 (262)
Q Consensus       128 ~~~~~~v~l~v~d~~~~~~FY~~~l---G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~  204 (262)
                      ..+++||.|.|+|++++++||+++|   ||+......         + .  .  +...+.+.....  .....++..|++
T Consensus         5 ~~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~~~~---------~-~--~--g~~~l~l~~~~~--~~~~~~g~~h~a   68 (128)
T PRK06724          5 RAGIHHIEFWVANLEESISFYDMLFSIIGWRKLNEVA---------Y-S--T--GESEIYFKEVDE--EIVRTLGPRHIC   68 (128)
T ss_pred             CcccCEEEEEeCCHHHHHHHHHHHHhhCCcEEeeeEe---------e-e--C--CCeeEEEecCCc--cccCCCCceeEE
Confidence            3579999999999999999999966   666532111         1 0  0  112222221111  011234778999


Q ss_pred             EEe---cCHHHHHHHHHHhCCeeecCCccCCC-Ccc-eEEEEeCCCCcEEEEEeccc
Q 024779          205 IGT---DDVYKTAEAIKLFGGKVTREPGPLPG-INT-KITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       205 ~~v---~dl~~~~~~l~~~g~~~~~~~~~~~~-~~~-~~~~~~DP~G~~ie~~~~~~  256 (262)
                      |.|   +|++++.++|+++|+++..+|...+. +.+ +.+||+|||||.|||...++
T Consensus        69 f~v~~~~dvd~~~~~l~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~~~~  125 (128)
T PRK06724         69 YQAINRKVVDEVAEFLSSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAYTPN  125 (128)
T ss_pred             EecCChHHHHHHHHHHHHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEeCCC
Confidence            997   78999999999999999888865442 223 77899999999999987754

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.71  E-value=4.2e-16  Score=110.62  Aligned_cols=117  Identities=20%  Similarity=0.330  Sum_probs=84.8

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCC---cccccCCceeEEEE
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGV---TDYDKGNAYAQIAI  205 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~i~~  205 (262)
                      .+++|+.|.|+|++++++||+++|||+........  .+  ..+..+    ...+.+......   ......++..|++|
T Consensus         2 ~~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~~--~~--~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~hi~~   73 (125)
T cd07253           2 KRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEV--GR--KALRFG----SQKINLHPVGGEFEPAAGSPGPGSDDLCL   73 (125)
T ss_pred             cccceEEEEecCHHHHHHHHHHHhCceeecccccC--Cc--eEEEeC----CEEEEEecCCCccCcCccCCCCCCceEEE
Confidence            36899999999999999999999999987653211  12  223322    134555442221   11223468899999


Q ss_pred             EecC-HHHHHHHHHHhCCeeecCCccCCC--CcceEEEEeCCCCcEEEEEe
Q 024779          206 GTDD-VYKTAEAIKLFGGKVTREPGPLPG--INTKITACLDPDGWKTVFVD  253 (262)
Q Consensus       206 ~v~d-l~~~~~~l~~~g~~~~~~~~~~~~--~~~~~~~~~DP~G~~ie~~~  253 (262)
                      .+++ +++++++|+++|+++..+|....+  +.++.+|++||+||.||+.+
T Consensus        74 ~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~  124 (125)
T cd07253          74 ITEPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSN  124 (125)
T ss_pred             EecccHHHHHHHHHHCCceeecCcccccCCCCCccEEEEECCCCCEEEeee
Confidence            9974 999999999999999887765432  23478999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.71  E-value=6.8e-16  Score=109.17  Aligned_cols=116  Identities=22%  Similarity=0.226  Sum_probs=86.0

Q ss_pred             EEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCc--ccccCCceeEEEEEecCHH
Q 024779          134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVT--DYDKGNAYAQIAIGTDDVY  211 (262)
Q Consensus       134 v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~i~~~v~dl~  211 (262)
                      ..|.|+|++++.+||+++||+.+......+++......+..+    ...+.+....+..  +.....+..|++|.|+|++
T Consensus         5 ~~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~d~~   80 (122)
T cd07246           5 PYLIVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIG----DSVLMLADEFPEHGSPASWGGTPVSLHLYVEDVD   80 (122)
T ss_pred             EEEEECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEEC----CEEEEEecCCcccCCCCCCCCceEEEEEEeCCHH
Confidence            468899999999999999999988765433333333444432    2345555322211  1123457789999999999


Q ss_pred             HHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEec
Q 024779          212 KTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDN  254 (262)
Q Consensus       212 ~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  254 (262)
                      ++++++.+.|+++..+|...+++ .+.++++||+||.|+|.|.
T Consensus        81 ~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DP~G~~~~l~~~  122 (122)
T cd07246          81 ATFARAVAAGATSVMPPADQFWG-DRYGGVRDPFGHRWWIATH  122 (122)
T ss_pred             HHHHHHHHCCCeEecCccccccc-ceEEEEECCCCCEEEEecC
Confidence            99999999999999888766665 4889999999999999873

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.71  E-value=5.9e-16  Score=112.59  Aligned_cols=111  Identities=23%  Similarity=0.420  Sum_probs=82.0

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCH
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDV   80 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~   80 (262)
                      |+||.|.|+|++++++||+++|||++.....   .  ...|+..+....  .+.+...       ...++.|++|.|+|+
T Consensus         5 l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~---~--~~~~l~~~~~~~--~~~l~~~-------~~~~~~hiaf~v~d~   70 (144)
T cd07239           5 ISHVVLNSPDVDKTVAFYEDVLGFRVSDWLG---D--QMAFLRCNSDHH--SIAIARG-------PHPSLNHVAFEMPSI   70 (144)
T ss_pred             eeEEEEECCCHHHHHHHHHhcCCCEEEEeeC---C--eEEEEECCCCcc--eEEEccC-------CCCceEEEEEECCCH
Confidence            5899999999999999999999999865422   1  245666554322  2333221       124788999999987


Q ss_pred             HHHH---HHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcC
Q 024779           81 AKTV---ELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        81 ~~~~---~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                      +++.   ++|+++|+++..++.....+..+++||.||+||.|||++..
T Consensus        71 ~~l~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~~  118 (144)
T cd07239          71 DEVMRGIGRMIDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSEL  118 (144)
T ss_pred             HHHHHHHHHHHHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccCc
Confidence            7764   89999999987665443334556789999999999999764

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.71  E-value=8.1e-16  Score=109.33  Aligned_cols=115  Identities=25%  Similarity=0.419  Sum_probs=83.4

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCC-CCCCCCCCceeEEEEeCC
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGV-DKYDIGTGFGHFGIAVDD   79 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~i~~~v~d   79 (262)
                      |+||.|.|+|++++++||+++|||++....+      ..+++..++  ....+.+...... .......++.|++|.|++
T Consensus         3 i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~------~~~~l~~~~--~~~~l~l~~~~~~~~~~~~~~~~~hi~f~v~~   74 (125)
T cd07255           3 IGAVTLRVADLERSLAFYQDVLGLEVLERTD------STAVLGTGG--KRPLLVLEEDPDAPPAPPGATGLYHFAILLPS   74 (125)
T ss_pred             EEEEEEEECCHHHHHHHHHhccCcEEEEcCC------CEEEEecCC--CeEEEEEEeCCCCCcccCCCCcEEEEEEECCC
Confidence            5899999999999999999999999986632      244554443  1233444433222 122344578899999984


Q ss_pred             ---HHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCC
Q 024779           80 ---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  126 (262)
Q Consensus        80 ---~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~  126 (262)
                         +++++++|.++|+++..+. ..  +..+.+||.||+||++||....+
T Consensus        75 ~~~v~~~~~~l~~~g~~~~~~~-~~--~~~~~~~~~DPdG~~iEi~~~~~  121 (125)
T cd07255          75 RADLAAALRRLIELGIPLVGAS-DH--LVSEALYLSDPEGNGIEIYADRP  121 (125)
T ss_pred             HHHHHHHHHHHHHcCCceeccc-cc--cceeEEEEECCCCCEEEEEEecC
Confidence               8899999999999875432 22  24477899999999999997654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.71  E-value=3.3e-16  Score=110.59  Aligned_cols=112  Identities=14%  Similarity=0.140  Sum_probs=82.4

Q ss_pred             CceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEec-
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTD-  208 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~-  208 (262)
                      +++||+|.|+|++++++||+++|||++.....   .  ...++..+  ..+..+.+...       ..++..|++|.+. 
T Consensus         2 ~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~---~--~~~~~~~~--~~~~~~~l~~~-------~~~~~~~~~f~v~~   67 (120)
T cd07252           2 SLGYLGVESSDLDAWRRFATDVLGLQVGDRPE---D--GALYLRMD--DRAWRIAVHPG-------EADDLAYAGWEVAD   67 (120)
T ss_pred             cccEEEEEeCCHHHHHHHHHhccCceeccCCC---C--CeEEEEcc--CCceEEEEEeC-------CCCceeEEEEEECC
Confidence            68999999999999999999999999864321   1  12334432  23556666421       1356789999996 


Q ss_pred             --CHHHHHHHHHHhCCeeecCCccC--CCCcceEEEEeCCCCcEEEEEecc
Q 024779          209 --DVYKTAEAIKLFGGKVTREPGPL--PGINTKITACLDPDGWKTVFVDNV  255 (262)
Q Consensus       209 --dl~~~~~~l~~~g~~~~~~~~~~--~~~~~~~~~~~DP~G~~ie~~~~~  255 (262)
                        |+++++++|+++|+++...|...  ..+.++.+|++|||||.|||+...
T Consensus        68 ~~dl~~~~~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  118 (120)
T cd07252          68 EAALDALAARLRAAGVAVEEGSAELAAERGVEGLIRFADPDGNRHELFWGP  118 (120)
T ss_pred             HHHHHHHHHHHHHcCCeEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEecc
Confidence              58999999999999998655322  222247899999999999998754

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.71  E-value=5.3e-16  Score=109.53  Aligned_cols=111  Identities=20%  Similarity=0.270  Sum_probs=81.2

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCC-
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD-   79 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d-   79 (262)
                      |.||+|.|+|+++|.+||+++|||++..+..  .   ...++..++.  +..+.+...       ...++.|++|.+++ 
T Consensus         3 l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~--~---~~~~~~~~~~--~~~~~l~~~-------~~~~~~~~~f~v~~~   68 (120)
T cd07252           3 LGYLGVESSDLDAWRRFATDVLGLQVGDRPE--D---GALYLRMDDR--AWRIAVHPG-------EADDLAYAGWEVADE   68 (120)
T ss_pred             ccEEEEEeCCHHHHHHHHHhccCceeccCCC--C---CeEEEEccCC--ceEEEEEeC-------CCCceeEEEEEECCH
Confidence            6899999999999999999999999865421  1   2456655433  333444322       12467789999974 


Q ss_pred             --HHHHHHHHHHcCCeeecCCcc--cCCCCeEEEEEECCCCCEEEEEEcC
Q 024779           80 --VAKTVELIKAKGGKVTREPGP--VKGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        80 --~~~~~~~l~~~G~~~~~~~~~--~~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                        +++++++|+++|+++...+..  ...+..+.++|.|||||.||++...
T Consensus        69 ~dl~~~~~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  118 (120)
T cd07252          69 AALDALAARLRAAGVAVEEGSAELAAERGVEGLIRFADPDGNRHELFWGP  118 (120)
T ss_pred             HHHHHHHHHHHHcCCeEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEecc
Confidence              889999999999998754422  1234557899999999999998653

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.71  E-value=4.1e-16  Score=111.20  Aligned_cols=118  Identities=31%  Similarity=0.497  Sum_probs=84.4

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCC-CCcceeeEeeecCCCceeEEEeeecCCC-CC-----CCCCCCceeE
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIP-EEKYTNAFLGYGPEDSHFVIELTYNYGV-DK-----YDIGTGFGHF   73 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~-----~~~~~~~~~i   73 (262)
                      |+||+|.|+|++++.+||+++|||++....... .......++..+    ...+++..+... ..     ...+.+..|+
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~g~~h~   76 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLG----NVQIELIEPLDDDSPIAKFLEKRGEGLHHI   76 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcC----CEEEEEEEECCCCCcHHHHHhcCCCceEEE
Confidence            689999999999999999999999997764432 223345555543    234555543221 11     1246788999


Q ss_pred             EEEeCCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCC---CCEEEEEE
Q 024779           74 GIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPD---GYKFELLE  123 (262)
Q Consensus        74 ~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~---G~~iel~~  123 (262)
                      +|.|+|+++++++++++|+++..++.....++.. +++.||+   |+.|||++
T Consensus        77 ~f~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~-~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          77 AFEVDDIDAALARLKAQGVRLLQEGPRIGAGGKR-VAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             EEEeCCHHHHHHHHHHCCCeeeccCCCccCCCCE-EEEEecCCCceEEEEecC
Confidence            9999999999999999999998877544444444 4455554   99999974

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.71  E-value=8.1e-16  Score=114.12  Aligned_cols=115  Identities=24%  Similarity=0.361  Sum_probs=78.6

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCC-
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD-   79 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d-   79 (262)
                      |+||+|.|+|++++++||+++|||++......+.+.....++..+....  .+.+..       ..+.++.|++|.|+| 
T Consensus         4 l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~~~~--~i~l~~-------~~~~~~~Hiaf~v~~~   74 (161)
T cd07256           4 LDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRKGGVH--DTALTG-------GNGPRLHHVAFWVPEP   74 (161)
T ss_pred             EEEEEEecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecCCCcc--eEEEec-------CCCCceeEEEEEcCCH
Confidence            5899999999999999999999999875543222222334554332222  223321       123478899999986 


Q ss_pred             --HHHHHHHHHHcCCee--ecCCcccCCCCeEEEEEECCCCCEEEEEEc
Q 024779           80 --VAKTVELIKAKGGKV--TREPGPVKGGNTVIAFIEDPDGYKFELLER  124 (262)
Q Consensus        80 --~~~~~~~l~~~G~~~--~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  124 (262)
                        +++++++|+++|+..  ...|.....++..++||.||+||.||++..
T Consensus        75 ~~v~~~~~~L~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~  123 (161)
T cd07256          75 HNIIRTCDLLAAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTG  123 (161)
T ss_pred             HHHHHHHHHHHHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeec
Confidence              777889999999863  223322222245679999999999999954

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.71  E-value=3.8e-16  Score=110.85  Aligned_cols=109  Identities=17%  Similarity=0.254  Sum_probs=79.8

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCC-
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD-   79 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d-   79 (262)
                      |.||.|.|+|+++|.+||+++|||++..+..      ...|+..+...  ..+.+....        .+..|++|.|+| 
T Consensus         7 l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~~--~~i~l~~~~--------~~~~~iaf~v~~~   70 (124)
T cd08361           7 IAYVRLGTRDLAGATRFATDILGLQVAERTA------KATYFRSDARD--HTLVYIEGD--------PAEQASGFELRDD   70 (124)
T ss_pred             eeEEEEeeCCHHHHHHHHHhccCceeccCCC------CeEEEEcCCcc--EEEEEEeCC--------CceEEEEEEECCH
Confidence            5899999999999999999999999865432      24566654322  223343211        245689999986 


Q ss_pred             --HHHHHHHHHHcCCeeecCCccc--CCCCeEEEEEECCCCCEEEEEEcC
Q 024779           80 --VAKTVELIKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        80 --~~~~~~~l~~~G~~~~~~~~~~--~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                        +++++++|+++|+++...+...  ..+..++++|.|||||.||+....
T Consensus        71 ~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~~  120 (124)
T cd08361          71 DALESAATELEQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVRP  120 (124)
T ss_pred             HHHHHHHHHHHHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEee
Confidence              9999999999999886544321  123566789999999999998653

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.71  E-value=6.1e-16  Score=109.96  Aligned_cols=116  Identities=23%  Similarity=0.311  Sum_probs=85.9

Q ss_pred             CceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCc-ccccCCceeEEEEEec
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVT-DYDKGNAYAQIAIGTD  208 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~i~~~v~  208 (262)
                      +++|+.|.|+|++++++||+++|||++.....      ...++...+  ....+.+....... ......+..|++|.|.
T Consensus         2 ~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~------~~~~l~~~~--~~~~l~l~~~~~~~~~~~~~~~~~hi~f~v~   73 (125)
T cd07255           2 RIGAVTLRVADLERSLAFYQDVLGLEVLERTD------STAVLGTGG--KRPLLVLEEDPDAPPAPPGATGLYHFAILLP   73 (125)
T ss_pred             EEEEEEEEECCHHHHHHHHHhccCcEEEEcCC------CEEEEecCC--CeEEEEEEeCCCCCcccCCCCcEEEEEEECC
Confidence            57899999999999999999999999986521      123444321  34566665543221 1223467899999996


Q ss_pred             ---CHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          209 ---DVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       209 ---dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                         ++++++++|+++|+++.. +..++.  .+.+|++||+||+|||....+
T Consensus        74 ~~~~v~~~~~~l~~~g~~~~~-~~~~~~--~~~~~~~DPdG~~iEi~~~~~  121 (125)
T cd07255          74 SRADLAAALRRLIELGIPLVG-ASDHLV--SEALYLSDPEGNGIEIYADRP  121 (125)
T ss_pred             CHHHHHHHHHHHHHcCCceec-cccccc--eeEEEEECCCCCEEEEEEecC
Confidence               589999999999998754 334444  478999999999999998766

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.71  E-value=8.7e-16  Score=109.66  Aligned_cols=116  Identities=22%  Similarity=0.259  Sum_probs=84.9

Q ss_pred             CceeEEeeecChhhhHHHHHHhc---CCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcc---cccCCceeEE
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAF---GMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD---YDKGNAYAQI  203 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~l---G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~i  203 (262)
                      +++||.+.|+|++++++||+++|   ||++.....  + ...+...     ..+..+.+.......+   ...+.++.|+
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~--~-~~~~~~~-----~~~~~i~l~~~~~~~~~~~~~~~~g~~hi   72 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWE--D-GRSWRAG-----DGGTYLVLQQADGESAGRHDRRNPGLHHL   72 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeec--c-CceEEec-----CCceEEEEEecccCCCcccccCCcCeeEE
Confidence            57899999999999999999999   999876542  1 1111111     1245666665332221   1234578999


Q ss_pred             EEEec---CHHHHHHHHHHhCCeeecCCccC--CCCcceEEEEeCCCCcEEEEEe
Q 024779          204 AIGTD---DVYKTAEAIKLFGGKVTREPGPL--PGINTKITACLDPDGWKTVFVD  253 (262)
Q Consensus       204 ~~~v~---dl~~~~~~l~~~g~~~~~~~~~~--~~~~~~~~~~~DP~G~~ie~~~  253 (262)
                      +|.|.   |+++++++|+++|+.+...+...  ..+..+.+|++||+||+|||+.
T Consensus        73 a~~v~~~~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~  127 (128)
T cd07242          73 AFRAPSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVA  127 (128)
T ss_pred             EEEcCCHHHHHHHHHHHHHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEe
Confidence            99996   58999999999999999887653  2223578999999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.70  E-value=1.5e-15  Score=108.48  Aligned_cols=116  Identities=22%  Similarity=0.364  Sum_probs=84.6

Q ss_pred             CceEEEEeCCHHHHHHHHHhhc---CcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCC---CCCCCCceeEE
Q 024779            1 MLHVVYRVGDLDRTIKFYTECL---GMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDK---YDIGTGFGHFG   74 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~l---G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~i~   74 (262)
                      |+||.|.|+|++++.+||+++|   ||++..+..  .   ...|... ..  ...+.+........   ...+.++.|++
T Consensus         2 i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~--~---~~~~~~~-~~--~~~i~l~~~~~~~~~~~~~~~~g~~hia   73 (128)
T cd07242           2 IHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWE--D---GRSWRAG-DG--GTYLVLQQADGESAGRHDRRNPGLHHLA   73 (128)
T ss_pred             CceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeec--c---CceEEec-CC--ceEEEEEecccCCCcccccCCcCeeEEE
Confidence            6899999999999999999999   999887642  1   1234332 12  23455554332221   12345788999


Q ss_pred             EEeCC---HHHHHHHHHHcCCeeecCCccc--CCCCeEEEEEECCCCCEEEEEEc
Q 024779           75 IAVDD---VAKTVELIKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLER  124 (262)
Q Consensus        75 ~~v~d---~~~~~~~l~~~G~~~~~~~~~~--~~~~~~~~~~~DP~G~~iel~~~  124 (262)
                      |.|+|   +++++++|+++|+++..++...  ..++.+.+|+.||+||++||+.+
T Consensus        74 ~~v~~~~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~~  128 (128)
T cd07242          74 FRAPSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVAP  128 (128)
T ss_pred             EEcCCHHHHHHHHHHHHHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEeC
Confidence            99974   8899999999999998766542  22467889999999999999853

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.70  E-value=6.8e-16  Score=109.72  Aligned_cols=119  Identities=23%  Similarity=0.314  Sum_probs=81.4

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCC-cceeeEeeecCCCceeEEEeeecCCCCC--CCCCCCceeEEEEe
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEE-KYTNAFLGYGPEDSHFVIELTYNYGVDK--YDIGTGFGHFGIAV   77 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~i~~~v   77 (262)
                      |+||+|.|+|++++++||+++|||++..+....+. .....++..........+++........  .....++.|++|.|
T Consensus         2 i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~hi~f~v   81 (126)
T cd08346           2 LHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDAGPKGRRGPGQIHHIAFSV   81 (126)
T ss_pred             cccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCCCCCCCCCCCCcEEEEEEEc
Confidence            68999999999999999999999998876532221 1122333322111222455554322211  12334678999999


Q ss_pred             CC---HHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEE
Q 024779           78 DD---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  122 (262)
Q Consensus        78 ~d---~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~  122 (262)
                      +|   +++++++++++|+++..++..   ++.+.++|.||+|+.||++
T Consensus        82 ~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~DP~G~~iE~~  126 (126)
T cd08346          82 PSEASLDAWRERLRAAGVPVSGVVDH---FGERSIYFEDPDGLRLELT  126 (126)
T ss_pred             CCHHHHHHHHHHHHHcCCcccceEee---cceEEEEEECCCCCEEEeC
Confidence            94   699999999999988654322   3568899999999999984

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.70  E-value=5.2e-16  Score=111.23  Aligned_cols=117  Identities=18%  Similarity=0.213  Sum_probs=81.4

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccc-eeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEe
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKY-TIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGT  207 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v  207 (262)
                      .+++|+.|.|+|++++++||+++|||++..+........ ...+...+    ...+.+....    ....++..|++|.|
T Consensus         3 ~~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~i~l~~~~----~~~~~~~~Hiaf~v   74 (131)
T cd08364           3 EGLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFLIG----GLWIAIMEGD----SLQERTYNHIAFKI   74 (131)
T ss_pred             ccEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccceeEEEcC----CeEEEEecCC----CCCCCCceEEEEEc
Confidence            468999999999999999999999998765432211000 00111111    2455554221    11234689999999


Q ss_pred             c--CHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEec
Q 024779          208 D--DVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDN  254 (262)
Q Consensus       208 ~--dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  254 (262)
                      +  |++++.++|+++|+++..++ +...+.++.+|++|||||.|||...
T Consensus        75 ~~~~ld~~~~~l~~~gv~~~~~~-~~~~~~g~~~yf~DPdG~~iEl~~~  122 (131)
T cd08364          75 SDSDVDEYTERIKALGVEMKPPR-PRVQGEGRSIYFYDFDNHLFELHTG  122 (131)
T ss_pred             CHHHHHHHHHHHHHCCCEEecCC-ccccCCceEEEEECCCCCEEEEecC
Confidence            7  79999999999999886443 3333346899999999999999864

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.70  E-value=8.4e-16  Score=111.22  Aligned_cols=112  Identities=22%  Similarity=0.306  Sum_probs=83.1

Q ss_pred             ceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCH-
Q 024779            2 LHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDV-   80 (262)
Q Consensus         2 ~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~-   80 (262)
                      +||.|.|+|++++.+||+++|||++..+..  .   ..+|+.......+..+.+..       ....+++|++|.|+|. 
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~--~---~~~~l~~~~~~~~h~~~~~~-------~~~~gl~Hiaf~v~~~~   68 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIE--D---RIVFMRCHPNPFHHTFAVGP-------ASSSHFHHVNFMVTDID   68 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeC--C---EEEEEEcCCCCCcceeeecc-------CCCCceEEEEEECCCHH
Confidence            599999999999999999999999876642  1   35566543222222222211       1245899999999864 


Q ss_pred             --HHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcC
Q 024779           81 --AKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        81 --~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                        ++++++|+++|+++...|.....+..+.+||.||+|+.||+....
T Consensus        69 ~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~  115 (141)
T cd07258          69 DIGKALYRIKAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSFGM  115 (141)
T ss_pred             HHHHHHHHHHHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEeCc
Confidence              577999999999987776655545678899999999999998654

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.70  E-value=5.1e-16  Score=110.08  Aligned_cols=111  Identities=17%  Similarity=0.206  Sum_probs=80.9

Q ss_pred             CceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEec-
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTD-  208 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~-  208 (262)
                      ++.|+.|.|+|++++++||+++|||++....    +.+  ..+..+   .+..+.+...      ....+..|++|.++ 
T Consensus         4 ~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~----~~~--~~~~~~---~~~~l~~~~~------~~~~~~~h~a~~v~~   68 (123)
T cd08351           4 TLNHTIVPARDREASAEFYAEILGLPWAKPF----GPF--AVVKLD---NGVSLDFAQP------DGEIPPQHYAFLVSE   68 (123)
T ss_pred             eEeEEEEEcCCHHHHHHHHHHhcCCEeeecc----CCE--EEEEcC---CCcEEEEecC------CCCCCcceEEEEeCH
Confidence            5789999999999999999999999986532    112  122221   1244554431      11235689998886 


Q ss_pred             -CHHHHHHHHHHhCCeeecCCccCC------CCcceEEEEeCCCCcEEEEEecc
Q 024779          209 -DVYKTAEAIKLFGGKVTREPGPLP------GINTKITACLDPDGWKTVFVDNV  255 (262)
Q Consensus       209 -dl~~~~~~l~~~g~~~~~~~~~~~------~~~~~~~~~~DP~G~~ie~~~~~  255 (262)
                       |+++++++|+++|+++...|....      .+.++.+|++||+||.|||++++
T Consensus        69 ~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~f~DPdG~~iEl~~~~  122 (123)
T cd08351          69 EEFDRIFARIRERGIDYWADPQRTEPGQINTNDGGRGVYFLDPDGHLLEIITRP  122 (123)
T ss_pred             HHHHHHHHHHHHcCCceecCCcccccccccCCCCeeEEEEECCCCCEEEEEecc
Confidence             799999999999999987764431      22358999999999999999874

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.70  E-value=5.7e-16  Score=109.52  Aligned_cols=111  Identities=26%  Similarity=0.367  Sum_probs=79.9

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeC--
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD--   78 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~--   78 (262)
                      ++|+.|.|+|++++++||+++|||++.....      ..+++..........+.+...       ...+..|++|.|.  
T Consensus         5 i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~-------~~~~~~hi~~~v~~~   71 (121)
T cd07266           5 LGHVELRVTDLEKSREFYVDVLGLVETEEDD------DRIYLRGLEEFIHHSLVLTKA-------PVAGLGHIAFRVRSE   71 (121)
T ss_pred             eeEEEEEcCCHHHHHHHHHhccCCEEeccCC------CeEEEEecCCCceEEEEEeeC-------CCCceeEEEEECCCH
Confidence            5899999999999999999999999875432      234444221112222333221       1246789999994  


Q ss_pred             -CHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEc
Q 024779           79 -DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  124 (262)
Q Consensus        79 -d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  124 (262)
                       |+++++++++++|+++...|.....+..+.+++.||+||.||++..
T Consensus        72 ~dv~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  118 (121)
T cd07266          72 EDLDKAEAFFQELGLPTEWVEAGEEPGQGRALRVEDPLGFPIEFYAE  118 (121)
T ss_pred             HHHHHHHHHHHHcCCCcccccCCcCCCCccEEEEECCCCCEEEEEec
Confidence             7899999999999998765433443455789999999999999864

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.70  E-value=1.2e-15  Score=109.37  Aligned_cols=115  Identities=21%  Similarity=0.233  Sum_probs=80.1

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCc-ceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeC-
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEK-YTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD-   78 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~-   78 (262)
                      |+||+|.|+|++++++||+++||+.+..+....... ....++..+.  .  .+.+.....    ....++.|++|.|+ 
T Consensus         5 i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~--~--~i~l~~~~~----~~~~~~~Hiaf~v~~   76 (131)
T cd08364           5 LSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFLIGG--L--WIAIMEGDS----LQERTYNHIAFKISD   76 (131)
T ss_pred             EeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccceeEEEcCC--e--EEEEecCCC----CCCCCceEEEEEcCH
Confidence            589999999999999999999999887654221100 0111222221  1  344432211    12246889999998 


Q ss_pred             -CHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEc
Q 024779           79 -DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  124 (262)
Q Consensus        79 -d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  124 (262)
                       +++++.++|+++|+++..+ .+...+.++++||.|||||.|||...
T Consensus        77 ~~ld~~~~~l~~~gv~~~~~-~~~~~~~g~~~yf~DPdG~~iEl~~~  122 (131)
T cd08364          77 SDVDEYTERIKALGVEMKPP-RPRVQGEGRSIYFYDFDNHLFELHTG  122 (131)
T ss_pred             HHHHHHHHHHHHCCCEEecC-CccccCCceEEEEECCCCCEEEEecC
Confidence             7999999999999988643 33334456899999999999999864

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.70  E-value=8.9e-16  Score=108.16  Aligned_cols=111  Identities=20%  Similarity=0.212  Sum_probs=79.3

Q ss_pred             eEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCC-----CCCCCCCceeEEEEe
Q 024779            3 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD-----KYDIGTGFGHFGIAV   77 (262)
Q Consensus         3 hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~~~~i~~~v   77 (262)
                      ++.|.|+|+++|.+||+++|||++.....      ....+..++.  ...+.+.......     ....+.++ |++|.|
T Consensus         4 ~~~l~v~D~~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~--~~~l~l~~~~~~~~~~~~~~~~~~~~-~~~~~v   74 (119)
T cd08359           4 YPVIVTDDLAETADFYVRHFGFTVVFDSD------WYVSLRSPDG--GVELAFMLPGHETVPAAQYQFQGQGL-ILNFEV   74 (119)
T ss_pred             eeEEEECCHHHHHHHHHHhhCcEEEeccC------cEEEEecCCC--ceEEEEccCCCCCCcchhcccCCceE-EEEEEE
Confidence            67899999999999999999999876521      1233333322  2334443221111     11123343 899999


Q ss_pred             CCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEE
Q 024779           78 DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  123 (262)
Q Consensus        78 ~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~  123 (262)
                      +|++++++++.++|+++..+|...++ +.+.+++.||+|+.|||+|
T Consensus        75 ~did~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DP~G~~ie~~~  119 (119)
T cd08359          75 DDVDAEYERLKAEGLPIVLPLRDEPW-GQRHFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             CCHHHHHHHHHhcCCCeeeccccCCC-cceEEEEECCCCCEEEEEC
Confidence            99999999999999998877766665 4678899999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.70  E-value=1.3e-15  Score=108.03  Aligned_cols=115  Identities=28%  Similarity=0.440  Sum_probs=82.9

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCC---CCCCCCCCCceeEEEEe
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG---VDKYDIGTGFGHFGIAV   77 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~i~~~v   77 (262)
                      |+||.|.|+|++++++||+++||+++....+.  .  ...++..++  .  .+++.....   ......+.+..|++|.+
T Consensus         4 l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~--~--~~~~~~~~~--~--~~~l~~~~~~~~~~~~~~~~~~~hi~~~~   75 (125)
T cd07253           4 IDHVVLTVADIEATLDFYTRVLGMEVVRFGEE--V--GRKALRFGS--Q--KINLHPVGGEFEPAAGSPGPGSDDLCLIT   75 (125)
T ss_pred             cceEEEEecCHHHHHHHHHHHhCceeeccccc--C--CceEEEeCC--E--EEEEecCCCccCcCccCCCCCCceEEEEe
Confidence            68999999999999999999999998765321  1  123344433  2  344443221   11222446788999999


Q ss_pred             CC-HHHHHHHHHHcCCeeecCCcccC--CCCeEEEEEECCCCCEEEEEE
Q 024779           78 DD-VAKTVELIKAKGGKVTREPGPVK--GGNTVIAFIEDPDGYKFELLE  123 (262)
Q Consensus        78 ~d-~~~~~~~l~~~G~~~~~~~~~~~--~~~~~~~~~~DP~G~~iel~~  123 (262)
                      ++ +++++++|+++|+++..+|....  .+..+.++|.||+|+.||+.+
T Consensus        76 ~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~  124 (125)
T cd07253          76 EPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSN  124 (125)
T ss_pred             cccHHHHHHHHHHCCceeecCcccccCCCCCccEEEEECCCCCEEEeee
Confidence            85 99999999999999876664432  134578999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.69  E-value=1.1e-15  Score=107.98  Aligned_cols=109  Identities=21%  Similarity=0.334  Sum_probs=78.5

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeC--
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD--   78 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~--   78 (262)
                      |+|+.|.|+|++++.+||+++||+++..+.+      ..+++..........+.+...       ...++.|++|.++  
T Consensus         7 i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~------~~~~l~~~~~~~~~~~~l~~~-------~~~~~~h~af~v~~~   73 (121)
T cd09013           7 LAHVELLTPKPEESLWFFTDVLGLEETGREG------QSVYLRAWGDYEHHSLKLTES-------PEAGLGHIAWRASSP   73 (121)
T ss_pred             eeEEEEEeCCHHHHHHHHHhCcCCEEEeecC------CeEEEEeccCCCccEEEEeeC-------CCCceEEEEEEcCCH
Confidence            6899999999999999999999999886542      244554432212223333321       1347889999998  


Q ss_pred             -CHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEc
Q 024779           79 -DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  124 (262)
Q Consensus        79 -d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  124 (262)
                       ++++++++++++|+++...+.. . +.+..++|.||+||.+|+...
T Consensus        74 ~~v~~~~~~l~~~G~~~~~~~~~-~-~~~~~~~~~DPdG~~iEl~~~  118 (121)
T cd09013          74 EALERRVAALEASGLGIGWIEGD-P-GHGKAYRFRSPDGHPMELYWE  118 (121)
T ss_pred             HHHHHHHHHHHHcCCccccccCC-C-CCcceEEEECCCCCEEEEEEe
Confidence             5888999999999987432211 2 345678999999999999864

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.69  E-value=4.3e-16  Score=107.78  Aligned_cols=108  Identities=24%  Similarity=0.345  Sum_probs=77.2

Q ss_pred             eeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecCHHHHHH
Q 024779          136 LRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAE  215 (262)
Q Consensus       136 l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~dl~~~~~  215 (262)
                      |.|+|++++++||+++|||++.....    .+.......  ........+.....  ......+..|++|.|+|++++++
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~~~----~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~dv~~~~~   72 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFDDP----DYVDFSLGF--RFHDGVIEFLQFPD--PPGPPGGGFHLCFEVEDVDALYE   72 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEEET----SEEEEEETE--EEEEEEEEEEEEES--SSSSSSSEEEEEEEESHHHHHHH
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEeCC----CeEEEEecc--chhhhhHHHccCCc--cccCCCceeEEEEEEcCHHHHHH
Confidence            68999999999999999999987432    122122211  00111222332211  23345688999999999999999


Q ss_pred             HHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEE
Q 024779          216 AIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFV  252 (262)
Q Consensus       216 ~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~  252 (262)
                      +++++|++++.+|...+++ .+.+++.||+||.|+|+
T Consensus        73 ~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   73 RLKELGAEIVTEPRDDPWG-QRSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             HHHHTTSEEEEEEEEETTS-EEEEEEE-TTS-EEEEE
T ss_pred             HHHHCCCeEeeCCEEcCCC-eEEEEEECCCCCEEEeC
Confidence            9999999999988887775 38999999999999985

...

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.69  E-value=1.6e-15  Score=107.32  Aligned_cols=117  Identities=20%  Similarity=0.205  Sum_probs=81.8

Q ss_pred             EEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCC--CCCCCCCceeEEEEeCCHH
Q 024779            4 VVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD--KYDIGTGFGHFGIAVDDVA   81 (262)
Q Consensus         4 v~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~i~~~v~d~~   81 (262)
                      -.|.|+|++++.+||+++||+++......+.+....+.+.+++  ..+.+.........  ......+..+++|.|+|++
T Consensus         3 p~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~d~d   80 (122)
T cd08355           3 PTLRYRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFGD--GGVMVGSVRDDYRASSARAGGAGTQGVYVVVDDVD   80 (122)
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEECC--EEEEEecCCCcccccccccCCCceEEEEEEECCHH
Confidence            4688999999999999999999987643223322233455442  22222221111111  0123345668999999999


Q ss_pred             HHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEE
Q 024779           82 KTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  123 (262)
Q Consensus        82 ~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~  123 (262)
                      +++++++++|+++..++...++ +.+.++++|||||.|+|.+
T Consensus        81 ~~~~~l~~~G~~v~~~~~~~~~-g~~~~~~~DPdG~~~~l~~  121 (122)
T cd08355          81 AHYERARAAGAEILREPTDTPY-GSREFTARDPEGNLWTFGT  121 (122)
T ss_pred             HHHHHHHHCCCEEeeCccccCC-CcEEEEEECCCCCEEEEec
Confidence            9999999999999988877765 4677889999999999964

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.69  E-value=1.4e-15  Score=107.79  Aligned_cols=109  Identities=18%  Similarity=0.308  Sum_probs=79.1

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeC--
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD--   78 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~--   78 (262)
                      ++|+.|.|+|+++|++||+++||+++.....      ...++..+.   ...+.+...      ....+..|++|.++  
T Consensus         5 ~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~---~~~l~~~~~------~~~~~~~h~a~~v~~~   69 (123)
T cd08351           5 LNHTIVPARDREASAEFYAEILGLPWAKPFG------PFAVVKLDN---GVSLDFAQP------DGEIPPQHYAFLVSEE   69 (123)
T ss_pred             EeEEEEEcCCHHHHHHHHHHhcCCEeeeccC------CEEEEEcCC---CcEEEEecC------CCCCCcceEEEEeCHH
Confidence            5799999999999999999999999875321      123333332   123444332      11224578998887  


Q ss_pred             CHHHHHHHHHHcCCeeecCCccc------CCCCeEEEEEECCCCCEEEEEEc
Q 024779           79 DVAKTVELIKAKGGKVTREPGPV------KGGNTVIAFIEDPDGYKFELLER  124 (262)
Q Consensus        79 d~~~~~~~l~~~G~~~~~~~~~~------~~~~~~~~~~~DP~G~~iel~~~  124 (262)
                      |+++++++|+++|+++...|...      ..++.+.++|.||+||.|||++.
T Consensus        70 dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~f~DPdG~~iEl~~~  121 (123)
T cd08351          70 EFDRIFARIRERGIDYWADPQRTEPGQINTNDGGRGVYFLDPDGHLLEIITR  121 (123)
T ss_pred             HHHHHHHHHHHcCCceecCCcccccccccCCCCeeEEEEECCCCCEEEEEec
Confidence            69999999999999987665443      12466899999999999999976

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.69  E-value=2.1e-15  Score=105.82  Aligned_cols=110  Identities=26%  Similarity=0.423  Sum_probs=83.6

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeC--
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD--   78 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~--   78 (262)
                      |+|+.|.|+|++++++||+++|||++....+      ...++..+. ..+..+.+...       ...+..|++|.|+  
T Consensus         3 l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~-------~~~~~~h~~~~v~~~   68 (117)
T cd07240           3 IAYAELEVPDLERALEFYTDVLGLTVLDRDA------GSVYLRCSE-DDHHSLVLTEG-------DEPGVDALGFEVASE   68 (117)
T ss_pred             eeEEEEecCCHHHHHHHHHhccCcEEEeecC------CeEEEecCC-CCcEEEEEEeC-------CCCCceeEEEEcCCH
Confidence            6899999999999999999999999987642      245666552 12233344322       1246789999998  


Q ss_pred             -CHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcC
Q 024779           79 -DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        79 -d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                       ++++++++++++|+++...+.... ++.+.++|.||+||.+|++...
T Consensus        69 ~~v~~~~~~l~~~g~~~~~~~~~~~-~~~~~~~~~DP~G~~ie~~~~~  115 (117)
T cd07240          69 EDLEALAAHLEAAGVAPEEASDPEP-GVGRGLRFQDPDGHLLELFVEA  115 (117)
T ss_pred             HHHHHHHHHHHHcCCceEEcCccCC-CCceEEEEECCCCCEEEEEEcc
Confidence             588999999999999877664333 3567889999999999999653

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.69  E-value=1.3e-15  Score=105.37  Aligned_cols=108  Identities=25%  Similarity=0.292  Sum_probs=76.4

Q ss_pred             EEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCHHHHHH
Q 024779            6 YRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVE   85 (262)
Q Consensus         6 l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~~~~~~   85 (262)
                      |.|+|++++++||+++|||++....+      ..+.+..+.....-...+....  .......+..|++|.|+|++++++
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~v~dv~~~~~   72 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFDDP------DYVDFSLGFRFHDGVIEFLQFP--DPPGPPGGGFHLCFEVEDVDALYE   72 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEEET------SEEEEEETEEEEEEEEEEEEEE--SSSSSSSSEEEEEEEESHHHHHHH
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEeCC------CeEEEEeccchhhhhHHHccCC--ccccCCCceeEEEEEEcCHHHHHH
Confidence            68999999999999999999988543      2333333211000011222211  122234577899999999999999


Q ss_pred             HHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEE
Q 024779           86 LIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  122 (262)
Q Consensus        86 ~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~  122 (262)
                      +++++|+++..+|....+ +.+.+++.||+||.|+|+
T Consensus        73 ~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   73 RLKELGAEIVTEPRDDPW-GQRSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             HHHHTTSEEEEEEEEETT-SEEEEEEE-TTS-EEEEE
T ss_pred             HHHHCCCeEeeCCEEcCC-CeEEEEEECCCCCEEEeC
Confidence            999999999888777665 668899999999999986

...

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.69  E-value=2e-15  Score=108.71  Aligned_cols=121  Identities=17%  Similarity=0.195  Sum_probs=85.9

Q ss_pred             CceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecC
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDD  209 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~d  209 (262)
                      +++|+.|.|+|++++++||+++|||++......    ....++..+ ......+.+.............+..|++|.|.|
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~----~~~~~~~~~-~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~~   75 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL----GGLVFLSRD-PDEHHQIALITGRPAAPPPGPAGLNHIAFEVDS   75 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeeccC----CcEEEEEec-CCCceEEEEEecCCCCCCCCCCCceEEEEEeCC
Confidence            578999999999999999999999998755331    123344422 123455666543222111234578899999987


Q ss_pred             HH---HHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccccc
Q 024779          210 VY---KTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDFL  258 (262)
Q Consensus       210 l~---~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~~  258 (262)
                      ++   +++++|+++|+++..++ ..++  ++.+|++||+||.|||+...+..
T Consensus        76 ~~~v~~~~~~l~~~G~~~~~~~-~~~~--~~~~~~~DP~G~~ie~~~~~~~~  124 (134)
T cd08348          76 LDDLRDLYERLRAAGITPVWPV-DHGN--AWSIYFRDPDGNRLELFVDTPWY  124 (134)
T ss_pred             HHHHHHHHHHHHHCCCCccccC-CCCc--eeEEEEECCCCCEEEEEEcCCCC
Confidence            65   58899999999987654 2232  47899999999999999876643

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.68  E-value=4e-15  Score=107.11  Aligned_cols=118  Identities=27%  Similarity=0.442  Sum_probs=82.9

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCH
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDV   80 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~   80 (262)
                      |+||.|.|+|++++++||+++||+++......    ....++..+.. ....+.+.............++.|++|.|+|.
T Consensus         2 i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~----~~~~~~~~~~~-~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~~~   76 (134)
T cd08348           2 LSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL----GGLVFLSRDPD-EHHQIALITGRPAAPPPGPAGLNHIAFEVDSL   76 (134)
T ss_pred             eeEEEEEecCHHHHHHHHHHhcCCEEEeeccC----CcEEEEEecCC-CceEEEEEecCCCCCCCCCCCceEEEEEeCCH
Confidence            68999999999999999999999998765421    12445554311 12234444332221112345788999999976


Q ss_pred             H---HHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCC
Q 024779           81 A---KTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  126 (262)
Q Consensus        81 ~---~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~  126 (262)
                      +   +++++|.+.|+++..++   ..+..+.+++.||+||.|||+...+
T Consensus        77 ~~v~~~~~~l~~~G~~~~~~~---~~~~~~~~~~~DP~G~~ie~~~~~~  122 (134)
T cd08348          77 DDLRDLYERLRAAGITPVWPV---DHGNAWSIYFRDPDGNRLELFVDTP  122 (134)
T ss_pred             HHHHHHHHHHHHCCCCccccC---CCCceeEEEEECCCCCEEEEEEcCC
Confidence            5   58899999999876543   2234578899999999999997654

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.68  E-value=1.6e-15  Score=105.72  Aligned_cols=108  Identities=19%  Similarity=0.238  Sum_probs=79.7

Q ss_pred             EEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecCHHHH
Q 024779          134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKT  213 (262)
Q Consensus       134 v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~dl~~~  213 (262)
                      ..|.|+|++++++||+++|||+.....    + . ..++... ...+..+.+.....     .++...|++|.|+|++++
T Consensus         4 ~~l~v~Dl~~s~~FY~~~lG~~~~~~~----~-~-~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~i~~~v~d~~~~   71 (112)
T cd07238           4 PNLPVADPEAAAAFYADVLGLDVVMDH----G-W-IATFASP-QNMTVQVSLATEGG-----TATVVPDLSIEVDDVDAA   71 (112)
T ss_pred             ceEecCCHHHHHHHHHHhcCceEEEcC----C-c-eEEEeec-CCCCcEEEEecCCC-----CCCCCCEEEEEeCCHHHH
Confidence            468899999999999999999985421    1 1 1222221 12244455543211     123457999999999999


Q ss_pred             HHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEec
Q 024779          214 AEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDN  254 (262)
Q Consensus       214 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  254 (262)
                      +++|+++|+++..+|...++| .+.+|++||+||.|+|+++
T Consensus        72 ~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          72 LARAVAAGFAIVYGPTDEPWG-VRRFFVRDPFGKLVNILTH  111 (112)
T ss_pred             HHHHHhcCCeEecCCccCCCc-eEEEEEECCCCCEEEEEEc
Confidence            999999999999888776765 3789999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.68  E-value=1.6e-15  Score=106.51  Aligned_cols=112  Identities=21%  Similarity=0.337  Sum_probs=85.0

Q ss_pred             CceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEec-
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTD-  208 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~-  208 (262)
                      +++|+.|.|+|++++++||+++|||++.....      ...++..+. ..+..+.+...       ...+..|++|.|. 
T Consensus         2 ~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~-------~~~~~~h~~~~v~~   67 (117)
T cd07240           2 RIAYAELEVPDLERALEFYTDVLGLTVLDRDA------GSVYLRCSE-DDHHSLVLTEG-------DEPGVDALGFEVAS   67 (117)
T ss_pred             ceeEEEEecCCHHHHHHHHHhccCcEEEeecC------CeEEEecCC-CCcEEEEEEeC-------CCCCceeEEEEcCC
Confidence            58999999999999999999999999886542      123344321 23444554421       1257889999997 


Q ss_pred             --CHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          209 --DVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       209 --dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                        ++++..++++++|+++...|...+++ ++.+|++||+||.||++...+
T Consensus        68 ~~~v~~~~~~l~~~g~~~~~~~~~~~~~-~~~~~~~DP~G~~ie~~~~~~  116 (117)
T cd07240          68 EEDLEALAAHLEAAGVAPEEASDPEPGV-GRGLRFQDPDGHLLELFVEAD  116 (117)
T ss_pred             HHHHHHHHHHHHHcCCceEEcCccCCCC-ceEEEEECCCCCEEEEEEccC
Confidence              68999999999999998877544443 478999999999999997643

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.68  E-value=1.7e-15  Score=105.74  Aligned_cols=109  Identities=25%  Similarity=0.403  Sum_probs=77.9

Q ss_pred             eEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeC--CH
Q 024779            3 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD--DV   80 (262)
Q Consensus         3 hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~--d~   80 (262)
                      ||.|.|+|++++.+||+++||+++..+.+      ...++..+.    ..+.+......  ...+.+..|++|.|+  |+
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~~------~~~~~~~~~----~~l~~~~~~~~--~~~~~~~~hiaf~v~~~d~   68 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSSS------KEAYFELAG----LWICLMEEDSL--QGPERTYTHIAFQIQSEEF   68 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeeccC------ceeEEEecC----eEEEeccCCCc--CCCCCCccEEEEEcCHHHH
Confidence            89999999999999999999999876542      233444432    23333322111  112346789999995  79


Q ss_pred             HHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEc
Q 024779           81 AKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  124 (262)
Q Consensus        81 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  124 (262)
                      ++++++++++|+++..++.... +..+.+++.||+|+.||++..
T Consensus        69 ~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~~DPdG~~iEi~~~  111 (113)
T cd08345          69 DEYTERLKALGVEMKPERPRVQ-GEGRSIYFYDPDGHLLELHAG  111 (113)
T ss_pred             HHHHHHHHHcCCccCCCccccC-CCceEEEEECCCCCEEEEEeC
Confidence            9999999999999864332222 345789999999999999854

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.68  E-value=1.7e-15  Score=107.36  Aligned_cols=114  Identities=23%  Similarity=0.259  Sum_probs=80.2

Q ss_pred             ceeEEeeecChhhhHHHHHHh---cCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEe
Q 024779          131 LCQVMLRVGDLDRSINFYEQA---FGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGT  207 (262)
Q Consensus       131 ~~~v~l~v~d~~~~~~FY~~~---lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v  207 (262)
                      +.|++|.|+|++++++||+++   |||++....  .+ . . ..+...  +....+.+.......+ ....+..|++|.|
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~--~~-~-~-~~~~~~--~~~~~~~l~~~~~~~~-~~~~~~~hi~f~v   72 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMED--GP-G-A-VGYGKG--GGGPDFWVTKPFDGEP-ATAGNGTHVAFAA   72 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeec--CC-c-e-eEeccC--CCCceEEEeccccCCC-CCCCCceEEEEEC
Confidence            579999999999999999999   689876543  11 1 1 222221  1244555554322111 1223457999999


Q ss_pred             cC---HHHHHHHHHHhCCeeecCCccCCC--CcceEEEEeCCCCcEEEEE
Q 024779          208 DD---VYKTAEAIKLFGGKVTREPGPLPG--INTKITACLDPDGWKTVFV  252 (262)
Q Consensus       208 ~d---l~~~~~~l~~~g~~~~~~~~~~~~--~~~~~~~~~DP~G~~ie~~  252 (262)
                      +|   ++++++++.++|+.+..+|...++  ...+.+|++||+||.|||+
T Consensus        73 ~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~  122 (123)
T cd07262          73 PSREAVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAV  122 (123)
T ss_pred             CCHHHHHHHHHHHHHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEe
Confidence            86   788999999999999888876654  2235789999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.68  E-value=1.5e-15  Score=107.18  Aligned_cols=112  Identities=27%  Similarity=0.388  Sum_probs=82.0

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEe-
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGT-  207 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v-  207 (262)
                      .+|+|+.|.|+|++++++||+++|||++.....    .+  .++...+ ...+.+.+..       ...++..|++|.+ 
T Consensus         2 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~----~~--~~~~~~~-~~~~~~~~~~-------~~~~~~~~~~~~v~   67 (120)
T cd08362           2 TALRGVGLGVPDLAAAAAFYREVWGLSVVAEDD----GI--VYLRATG-SEHHILRLRR-------SDRNRLDVVSFSVA   67 (120)
T ss_pred             ceeeEEEEecCCHHHHHHHHHhCcCcEEEEecC----CE--EEEECCC-CccEEEEecc-------CCCCCCceEEEEeC
Confidence            368999999999999999999999999865422    12  2333222 2233343321       1234678999999 


Q ss_pred             --cCHHHHHHHHHHhCCeeecCCccC--CCCcceEEEEeCCCCcEEEEEecc
Q 024779          208 --DDVYKTAEAIKLFGGKVTREPGPL--PGINTKITACLDPDGWKTVFVDNV  255 (262)
Q Consensus       208 --~dl~~~~~~l~~~g~~~~~~~~~~--~~~~~~~~~~~DP~G~~ie~~~~~  255 (262)
                        +++++++++++++|+++..+|...  +++ ++.++++||+||.|||+...
T Consensus        68 ~~~~l~~~~~~l~~~G~~~~~~~~~~~~~~~-~~~~~~~DP~G~~iel~~~~  118 (120)
T cd08362          68 SRADVDALARQVAARGGTVLSEPGATDDPGG-GYGFRFFDPDGRLIEFSADV  118 (120)
T ss_pred             CHHHHHHHHHHHHHcCCceecCCcccCCCCC-ceEEEEECCCCCEEEEEecc
Confidence              578999999999999998776433  333 57889999999999998754

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>PRK06724 hypothetical protein; Provisional

Probab=99.68  E-value=3e-15  Score=106.41  Aligned_cols=108  Identities=20%  Similarity=0.291  Sum_probs=74.3

Q ss_pred             CceEEEEeCCHHHHHHHHHhhc---CcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEe
Q 024779            1 MLHVVYRVGDLDRTIKFYTECL---GMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV   77 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~l---G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v   77 (262)
                      |+||+|.|+|+++|++||+++|   |++....-         .+   ......  +.+......  .....|..|+||.|
T Consensus         8 i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~~~---------~~---~~g~~~--l~l~~~~~~--~~~~~g~~h~af~v   71 (128)
T PRK06724          8 IHHIEFWVANLEESISFYDMLFSIIGWRKLNEV---------AY---STGESE--IYFKEVDEE--IVRTLGPRHICYQA   71 (128)
T ss_pred             cCEEEEEeCCHHHHHHHHHHHHhhCCcEEeeeE---------ee---eCCCee--EEEecCCcc--ccCCCCceeEEEec
Confidence            6899999999999999999966   66643210         11   011111  111111110  11234778999998


Q ss_pred             ---CCHHHHHHHHHHcCCeeecCCcccC--CCCeEEEEEECCCCCEEEEEEc
Q 024779           78 ---DDVAKTVELIKAKGGKVTREPGPVK--GGNTVIAFIEDPDGYKFELLER  124 (262)
Q Consensus        78 ---~d~~~~~~~l~~~G~~~~~~~~~~~--~~~~~~~~~~DP~G~~iel~~~  124 (262)
                         +++++++++|+++|+++..+|....  .++.++++|.|||||.||+...
T Consensus        72 ~~~~dvd~~~~~l~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~~  123 (128)
T PRK06724         72 INRKVVDEVAEFLSSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAYT  123 (128)
T ss_pred             CChHHHHHHHHHHHHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEeC
Confidence               6799999999999999877765433  2355788999999999999866

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.67  E-value=2.4e-15  Score=103.97  Aligned_cols=121  Identities=26%  Similarity=0.288  Sum_probs=91.3

Q ss_pred             CCCCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEE
Q 024779          127 TPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIG  206 (262)
Q Consensus       127 ~~~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~  206 (262)
                      .+..+.|..|.+.|++++++||.++|||+..+..+...  +..+.+.......++.+.-.   +  ...++++.+.+.|.
T Consensus         6 ~~~~i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~~~~--~~y~~f~~~~~~~gG~l~~~---~--~~~p~~~~~~iy~~   78 (127)
T COG3324           6 EKGTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDMGE--MRYAVFPADGAGAGGGLMAR---P--GSPPGGGGWVIYFA   78 (127)
T ss_pred             cCCccEEEeeecCCHHHHHHHHHHhhCceecccccCCC--ceEEEEECCCccccceeccC---C--cCCCCCCCEEEEEe
Confidence            45678999999999999999999999999987654432  34444433322222222111   0  12223678999999


Q ss_pred             ecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecc
Q 024779          207 TDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNV  255 (262)
Q Consensus       207 v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  255 (262)
                      |+|+++..+|.+++|++++.++...+++ ++++.+.||+||+|.|.+..
T Consensus        79 v~did~~l~rv~~~GG~V~~p~~~~p~~-G~~a~~~Dp~Gn~~~l~s~~  126 (127)
T COG3324          79 VDDIDATLERVVAAGGKVLRPKTEFPGG-GRIAHFVDPEGNRFGLWSPA  126 (127)
T ss_pred             cCChHHHHHHHHhcCCeEEecccccCCc-eEEEEEECCCCCEEEEeecC
Confidence            9999999999999999999999888854 58999999999999998753

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.67  E-value=6.7e-15  Score=104.04  Aligned_cols=115  Identities=21%  Similarity=0.211  Sum_probs=83.4

Q ss_pred             EEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCC--CCCCCCCCceeEEEEeCCHH
Q 024779            4 VVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGV--DKYDIGTGFGHFGIAVDDVA   81 (262)
Q Consensus         4 v~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~i~~~v~d~~   81 (262)
                      +.|.|+|++++.+||+++||+++......+.+......+..++  .  .+.+......  .....+.+..|++|.|+|++
T Consensus         5 ~~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~--~--~~~l~~~~~~~~~~~~~~~~~~~~~~~v~d~~   80 (122)
T cd07246           5 PYLIVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIGD--S--VLMLADEFPEHGSPASWGGTPVSLHLYVEDVD   80 (122)
T ss_pred             EEEEECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEECC--E--EEEEecCCcccCCCCCCCCceEEEEEEeCCHH
Confidence            4688999999999999999999987654333333344444443  2  2344322111  01123345678999999999


Q ss_pred             HHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEE
Q 024779           82 KTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  123 (262)
Q Consensus        82 ~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~  123 (262)
                      ++++++.+.|+++..++....+ +.+.+++.||+|+.|+|.+
T Consensus        81 ~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DP~G~~~~l~~  121 (122)
T cd07246          81 ATFARAVAAGATSVMPPADQFW-GDRYGGVRDPFGHRWWIAT  121 (122)
T ss_pred             HHHHHHHHCCCeEecCcccccc-cceEEEEECCCCCEEEEec
Confidence            9999999999999888766654 5678899999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.67  E-value=2.7e-15  Score=104.43  Aligned_cols=109  Identities=25%  Similarity=0.289  Sum_probs=80.8

Q ss_pred             EeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecCHHHHH
Q 024779          135 MLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTA  214 (262)
Q Consensus       135 ~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~dl~~~~  214 (262)
                      .|.|+|++++++||+++|||++.....  +.  .+.++..    ++..+.+.......+. ..++..|++|.++|++++.
T Consensus         3 ~i~v~d~~~s~~FY~~~lg~~~~~~~~--~~--~~~~~~~----~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   73 (112)
T cd08349           3 VLPVSDIERSLAFYRDVLGFEVDWEHP--EP--GYAFLSR----GGAQLMLSEHDGDEPV-PLGRGGSVYIEVEDVDALY   73 (112)
T ss_pred             EEEECCHHHHHHHHHhccCeEEEEEcC--CC--cEEEEEe----CCEEEEEeccCCCCCC-CCCCcEEEEEEeCCHHHHH
Confidence            588999999999999999999876543  11  2333442    2355555543322111 3456779999999999999


Q ss_pred             HHHHHhCCe-eecCCccCCCCcceEEEEeCCCCcEEEEEe
Q 024779          215 EAIKLFGGK-VTREPGPLPGINTKITACLDPDGWKTVFVD  253 (262)
Q Consensus       215 ~~l~~~g~~-~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~  253 (262)
                      ++++++|++ +..++...+++ .+.++++||+|+.|+|+|
T Consensus        74 ~~l~~~G~~~~~~~~~~~~~g-~~~~~~~DP~G~~ie~~~  112 (112)
T cd08349          74 AELKAKGADLIVYPPEDQPWG-MREFAVRDPDGNLLRFGE  112 (112)
T ss_pred             HHHHHcCCcceecCccCCCcc-cEEEEEECCCCCEEEecC
Confidence            999999999 66666666664 378899999999999986

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.67  E-value=4.7e-15  Score=105.12  Aligned_cols=114  Identities=25%  Similarity=0.319  Sum_probs=78.2

Q ss_pred             CceEEEEeCCHHHHHHHHHhh---cCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEe
Q 024779            1 MLHVVYRVGDLDRTIKFYTEC---LGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV   77 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~---lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v   77 (262)
                      |+||.|.|+|++++++||+++   ||+++..+..  .   ....+..+....  .+.+........ ....+..|++|.|
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~~--~---~~~~~~~~~~~~--~~~l~~~~~~~~-~~~~~~~hi~f~v   72 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMEDG--P---GAVGYGKGGGGP--DFWVTKPFDGEP-ATAGNGTHVAFAA   72 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeecC--C---ceeEeccCCCCc--eEEEeccccCCC-CCCCCceEEEEEC
Confidence            689999999999999999998   6998875531  1   122222221222  333333221111 1223456999999


Q ss_pred             CC---HHHHHHHHHHcCCeeecCCcccCC--CCeEEEEEECCCCCEEEEE
Q 024779           78 DD---VAKTVELIKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELL  122 (262)
Q Consensus        78 ~d---~~~~~~~l~~~G~~~~~~~~~~~~--~~~~~~~~~DP~G~~iel~  122 (262)
                      +|   ++++++++.++|+.+..+|....+  ...+.++|.||+||.|||+
T Consensus        73 ~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~  122 (123)
T cd07262          73 PSREAVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAV  122 (123)
T ss_pred             CCHHHHHHHHHHHHHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEe
Confidence            97   788999999999998877655443  2446789999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.66  E-value=4e-15  Score=103.85  Aligned_cols=107  Identities=21%  Similarity=0.297  Sum_probs=77.9

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCH
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDV   80 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~   80 (262)
                      |+||.|.|+|+++|++||++ |||++..+..      ..+|+..+.. .+..+.+...       ...++.|++|.|+|.
T Consensus         4 l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~~------~~~~~~~~~~-~~~~~~~~~~-------~~~~~~~~af~v~~~   68 (113)
T cd07267           4 IAHVRFEHPDLDKAERFLTD-FGLEVAARTD------DELYYRGYGT-DPFVYVARKG-------EKARFVGAAFEAASR   68 (113)
T ss_pred             EEEEEEccCCHHHHHHHHHH-cCCEEEEecC------CeEEEecCCC-ccEEEEcccC-------CcCcccEEEEEECCH
Confidence            58999999999999999999 9999865532      2445544322 2222222111       124677999999999


Q ss_pred             HHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEc
Q 024779           81 AKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  124 (262)
Q Consensus        81 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  124 (262)
                      +++.+.+++.|.....++. .+ ++.+.++|.||+||.|||+..
T Consensus        69 ~~~~~~~~~~g~~~~~~~~-~~-~~~~~~~~~DPdG~~iEl~~~  110 (113)
T cd07267          69 ADLEKAAALPGASVIDDLE-AP-GGGKRVTLTDPDGFPVELVYG  110 (113)
T ss_pred             HHHHHHHHcCCCeeecCCC-CC-CCceEEEEECCCCCEEEEEec
Confidence            9999999999998765432 23 356789999999999999854

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.66  E-value=3.1e-15  Score=105.83  Aligned_cols=114  Identities=21%  Similarity=0.286  Sum_probs=79.7

Q ss_pred             ceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCc------ccccCCceeEEE
Q 024779          131 LCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVT------DYDKGNAYAQIA  204 (262)
Q Consensus       131 ~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~~~~~~~~i~  204 (262)
                      |.++.|.|+|++++++||+++|||++..+.   +..  ..++..++.   ..+.+.......      +.....+..|++
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~~---~~~--~~~l~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   72 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLKE---DRR--LAFFWVGGR---GMLLLFDPGATSTPGGEIPPHGGSGPGHFA   72 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeecC---CCc--eEEEEcCCC---cEEEEEecCCcccccCCCCCCCCCCccEEE
Confidence            468999999999999999999999987641   222  234443321   333333221111      111234778999


Q ss_pred             EEe--cCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEec
Q 024779          205 IGT--DDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDN  254 (262)
Q Consensus       205 ~~v--~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  254 (262)
                      |.+  +|++++++++.++|+++...+. ..+ .++.+|++||+||.|||++.
T Consensus        73 ~~v~~~dl~~~~~~l~~~g~~~~~~~~-~~~-~~~~~~~~DP~G~~ie~~~~  122 (122)
T cd08354          73 FAIPAEELAEWEAHLEAKGVAIESEVQ-WPR-GGRSLYFRDPDGNLLELATP  122 (122)
T ss_pred             EEcCHHHHHHHHHHHHhcCCceecccc-CCC-CeeEEEEECCCCCEEEEecC
Confidence            988  5899999999999999876554 222 25789999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.66  E-value=3e-15  Score=104.66  Aligned_cols=108  Identities=26%  Similarity=0.286  Sum_probs=79.3

Q ss_pred             EEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcc-cccCCceeEEEEEecC---
Q 024779          134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD-YDKGNAYAQIAIGTDD---  209 (262)
Q Consensus       134 v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~i~~~v~d---  209 (262)
                      +.|.|+|++++++||+++|||++....    ..+.  .+...   ++..+.+.......+ .....+..|++|.+++   
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~~----~~~~--~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~   72 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVELS----PTFA--LFVLG---SGVKLGLWSRHTVEPASDATGGGSELAFMVDDGAA   72 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCCC----CceE--EEEeC---CCcEEEEeeccccCCCCCCCCCceEEEEEcCCHHH
Confidence            678999999999999999999976532    1222  22221   124555554332221 1234577899999975   


Q ss_pred             HHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEE
Q 024779          210 VYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFV  252 (262)
Q Consensus       210 l~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~  252 (262)
                      +++++++++++|+++..+|...++|  +.++++|||||.|||+
T Consensus        73 ~~~~~~~~~~~g~~v~~~~~~~~~g--~~~~~~DPdGn~ie~~  113 (114)
T cd07261          73 VDALYAEWQAKGVKIIQEPTEMDFG--YTFVALDPDGHRLRVF  113 (114)
T ss_pred             HHHHHHHHHHCCCeEecCccccCCc--cEEEEECCCCCEEEee
Confidence            8899999999999999988887774  6789999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.66  E-value=6.6e-15  Score=104.09  Aligned_cols=113  Identities=27%  Similarity=0.405  Sum_probs=80.5

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCC------CCCCCCCceeEE
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD------KYDIGTGFGHFG   74 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------~~~~~~~~~~i~   74 (262)
                      +.||.|.|+|++++++||+++|||++..+.   .+  ...++..++. .  .+.+.......      +.....+..|++
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~~---~~--~~~~l~~~~~-~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   72 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLKE---DR--RLAFFWVGGR-G--MLLLFDPGATSTPGGEIPPHGGSGPGHFA   72 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeecC---CC--ceEEEEcCCC-c--EEEEEecCCcccccCCCCCCCCCCccEEE
Confidence            568999999999999999999999987641   11  2345555543 2  23333221110      111234778999


Q ss_pred             EEeC--CHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEE
Q 024779           75 IAVD--DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  123 (262)
Q Consensus        75 ~~v~--d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~  123 (262)
                      |.++  |++++++++.++|+++..++. .. ++.+.++|.||+|+.||+++
T Consensus        73 ~~v~~~dl~~~~~~l~~~g~~~~~~~~-~~-~~~~~~~~~DP~G~~ie~~~  121 (122)
T cd08354          73 FAIPAEELAEWEAHLEAKGVAIESEVQ-WP-RGGRSLYFRDPDGNLLELAT  121 (122)
T ss_pred             EEcCHHHHHHHHHHHHhcCCceecccc-CC-CCeeEEEEECCCCCEEEEec
Confidence            9985  799999999999998876543 22 35678999999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.66  E-value=5e-15  Score=103.35  Aligned_cols=109  Identities=21%  Similarity=0.290  Sum_probs=79.0

Q ss_pred             CceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecC
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDD  209 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~d  209 (262)
                      ++.|+.|.|+|++++++||++ |||++.....  +   . .++...+ .....+ +...      ...++..|++|.|+|
T Consensus         3 ~l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~~--~---~-~~~~~~~-~~~~~~-~~~~------~~~~~~~~~af~v~~   67 (113)
T cd07267           3 DIAHVRFEHPDLDKAERFLTD-FGLEVAARTD--D---E-LYYRGYG-TDPFVY-VARK------GEKARFVGAAFEAAS   67 (113)
T ss_pred             EEEEEEEccCCHHHHHHHHHH-cCCEEEEecC--C---e-EEEecCC-CccEEE-Eccc------CCcCcccEEEEEECC
Confidence            689999999999999999999 9999865422  1   1 2333221 122222 2211      123578899999999


Q ss_pred             HHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecc
Q 024779          210 VYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNV  255 (262)
Q Consensus       210 l~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  255 (262)
                      .+++.+.+++.|..+...+. .+++ ++++|++||+||.|||+...
T Consensus        68 ~~~~~~~~~~~g~~~~~~~~-~~~~-~~~~~~~DPdG~~iEl~~~~  111 (113)
T cd07267          68 RADLEKAAALPGASVIDDLE-APGG-GKRVTLTDPDGFPVELVYGQ  111 (113)
T ss_pred             HHHHHHHHHcCCCeeecCCC-CCCC-ceEEEEECCCCCEEEEEecc
Confidence            99999999999998876543 3443 47899999999999998653

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.65  E-value=5.2e-15  Score=104.60  Aligned_cols=108  Identities=30%  Similarity=0.487  Sum_probs=77.5

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEe--C
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV--D   78 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v--~   78 (262)
                      |+||.|.|+|++++.+||+++||+++....+      ...++..+.  ..+.+.....  .   ....+..|++|.+  +
T Consensus         2 i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~------~~~~~~~~~--~~~~l~~~~~--~---~~~~~~~hi~f~v~~~   68 (121)
T cd07244           2 INHITLAVSDLERSVAFYVDLLGFKLHVRWD------KGAYLEAGD--LWLCLSVDAN--V---GPAKDYTHYAFSVSEE   68 (121)
T ss_pred             cceEEEEECCHHHHHHHHHHhcCCEEEEecC------CceEEecCC--EEEEEecCCC--C---CCCCCeeeEEEEeCHH
Confidence            6899999999999999999999999876432      123444432  2222222111  1   1234677999998  4


Q ss_pred             CHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcC
Q 024779           79 DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        79 d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                      |+++++++++++|+++..++..    ..+.++|.|||||.|||++..
T Consensus        69 dl~~~~~~l~~~G~~~~~~~~~----~~~~~~f~DPdG~~ie~~~~~  111 (121)
T cd07244          69 DFASLKEKLRQAGVKEWKENTS----EGDSFYFLDPDGHKLELHVGS  111 (121)
T ss_pred             HHHHHHHHHHHcCCcccCCCCC----CccEEEEECCCCCEEEEEeCC
Confidence            7999999999999988654322    236799999999999999653

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.65  E-value=2.7e-15  Score=106.15  Aligned_cols=113  Identities=19%  Similarity=0.173  Sum_probs=77.4

Q ss_pred             ceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecC-----CcccccCCceeEEEE
Q 024779          131 LCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYG-----VTDYDKGNAYAQIAI  205 (262)
Q Consensus       131 ~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~i~~  205 (262)
                      ++||+|.|+|++++++||++ |||++......  .  ....+..+.   +..+.+.....     .......++..+++|
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~-LGf~~~~~~~~--~--~~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~   72 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRR-LGFDFPEEADD--E--PHVEAVLPG---GVRLAWDTVESIRSFTPGWTPTGGHRIALAF   72 (122)
T ss_pred             CceEEEEeccHHHHHHHHHH-hCceecCCcCC--C--CcEEEEeCC---CEEEEEEcccceeeecCCCCCCCCCcEEEEE
Confidence            57999999999999999975 99997543221  1  112222111   23333322110     001122345678888


Q ss_pred             Eec---CHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEE
Q 024779          206 GTD---DVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFV  252 (262)
Q Consensus       206 ~v~---dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~  252 (262)
                      .+.   |+++++++|+++|+++..+|...++|. +.++++||+||.|||+
T Consensus        73 ~~~~~~dvd~~~~~l~~~G~~~~~~~~~~~~g~-~~~~~~DPdG~~iel~  121 (122)
T cd07235          73 LCETPAEVDALYAELVGAGYPGHKEPWDAPWGQ-RYAIVKDPDGNLVDLF  121 (122)
T ss_pred             EcCCHHHHHHHHHHHHHCCCCcCCCCccCCCCC-EEEEEECCCCCEEEEe
Confidence            764   899999999999999998887777753 7899999999999996

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.65  E-value=1.1e-14  Score=101.40  Aligned_cols=109  Identities=21%  Similarity=0.241  Sum_probs=78.1

Q ss_pred             eEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCHHH
Q 024779            3 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAK   82 (262)
Q Consensus         3 hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~~~   82 (262)
                      +..|.|+|++++++||+++|||++....    +  ...++..+.. ....+.+.....     .+....|++|.|+|+++
T Consensus         3 ~~~l~v~Dl~~s~~FY~~~lG~~~~~~~----~--~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~i~~~v~d~~~   70 (112)
T cd07238           3 VPNLPVADPEAAAAFYADVLGLDVVMDH----G--WIATFASPQN-MTVQVSLATEGG-----TATVVPDLSIEVDDVDA   70 (112)
T ss_pred             cceEecCCHHHHHHHHHHhcCceEEEcC----C--ceEEEeecCC-CCcEEEEecCCC-----CCCCCCEEEEEeCCHHH
Confidence            3578999999999999999999986431    1  2233332221 123344432211     11234589999999999


Q ss_pred             HHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEc
Q 024779           83 TVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  124 (262)
Q Consensus        83 ~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  124 (262)
                      ++++|+++|+++..++....+ +.+.+++.||+||.|+|+++
T Consensus        71 ~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          71 ALARAVAAGFAIVYGPTDEPW-GVRRFFVRDPFGKLVNILTH  111 (112)
T ss_pred             HHHHHHhcCCeEecCCccCCC-ceEEEEEECCCCCEEEEEEc
Confidence            999999999998877766554 55778999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.65  E-value=4.3e-15  Score=105.00  Aligned_cols=109  Identities=26%  Similarity=0.355  Sum_probs=78.8

Q ss_pred             CceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEe--
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGT--  207 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v--  207 (262)
                      ++.|+.|.|+|++++.+||+++|||++....+  +  .  .++..+    ...+.+.....   ....++..|++|.+  
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~--~--~--~~~~~~----~~~~~l~~~~~---~~~~~~~~hi~f~v~~   67 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVRWD--K--G--AYLEAG----DLWLCLSVDAN---VGPAKDYTHYAFSVSE   67 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEecC--C--c--eEEecC----CEEEEEecCCC---CCCCCCeeeEEEEeCH
Confidence            57899999999999999999999999865432  1  1  223322    12233322111   12245778999988  


Q ss_pred             cCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecc
Q 024779          208 DDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNV  255 (262)
Q Consensus       208 ~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  255 (262)
                      +|+++++++++++|+++..++..  .  ++.+|++|||||.|||+...
T Consensus        68 ~dl~~~~~~l~~~G~~~~~~~~~--~--~~~~~f~DPdG~~ie~~~~~  111 (121)
T cd07244          68 EDFASLKEKLRQAGVKEWKENTS--E--GDSFYFLDPDGHKLELHVGS  111 (121)
T ss_pred             HHHHHHHHHHHHcCCcccCCCCC--C--ccEEEEECCCCCEEEEEeCC
Confidence            58999999999999998765432  2  36899999999999999754

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.65  E-value=7.6e-15  Score=103.52  Aligned_cols=111  Identities=25%  Similarity=0.349  Sum_probs=80.0

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeC--
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD--   78 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~--   78 (262)
                      |+|+.|.|+|++++++||+++|||++.....      ..+++..+.. ....+.+...       ...++.|++|.++  
T Consensus         4 i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~-~~~~~~~~~~-------~~~~~~~~~~~v~~~   69 (120)
T cd08362           4 LRGVGLGVPDLAAAAAFYREVWGLSVVAEDD------GIVYLRATGS-EHHILRLRRS-------DRNRLDVVSFSVASR   69 (120)
T ss_pred             eeEEEEecCCHHHHHHHHHhCcCcEEEEecC------CEEEEECCCC-ccEEEEeccC-------CCCCCceEEEEeCCH
Confidence            6899999999999999999999999875432      2345543322 2222333211       1235678999994  


Q ss_pred             -CHHHHHHHHHHcCCeeecCCcccC-CCCeEEEEEECCCCCEEEEEEcC
Q 024779           79 -DVAKTVELIKAKGGKVTREPGPVK-GGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        79 -d~~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                       ++++++++|+++|+++..++.... .++.+.++|.||+||.++|+...
T Consensus        70 ~~l~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  118 (120)
T cd08362          70 ADVDALARQVAARGGTVLSEPGATDDPGGGYGFRFFDPDGRLIEFSADV  118 (120)
T ss_pred             HHHHHHHHHHHHcCCceecCCcccCCCCCceEEEEECCCCCEEEEEecc
Confidence             689999999999999876653322 23467789999999999998754

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.64  E-value=5.7e-15  Score=104.23  Aligned_cols=107  Identities=21%  Similarity=0.217  Sum_probs=76.8

Q ss_pred             EEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecCHHHH
Q 024779          134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKT  213 (262)
Q Consensus       134 v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~dl~~~  213 (262)
                      ..|.|+|++++++||++ |||++......     .+..+..+    +..+.|.....   ........|++|.|+|++++
T Consensus         6 ~~l~v~Dl~~s~~FY~~-lG~~~~~~~~~-----~~~~~~~~----~~~l~l~~~~~---~~~~~~~~~~~~~v~dvd~~   72 (120)
T cd08350           6 PNLPSRDLDATEAFYAR-LGFSVGYRQAA-----GYMILRRG----DLELHFFAHPD---LDPATSPFGCCLRLPDVAAL   72 (120)
T ss_pred             ceeEcCCHHHHHHHHHH-cCCEEEecCCC-----CEEEEEcC----CEEEEEEecCc---CCCCCCcceEEEEeCCHHHH
Confidence            57899999999999999 99998754321     23334322    24556654321   11223446899999999999


Q ss_pred             HHHHHHhCCeee-------cCCccCCCCcceEEEEeCCCCcEEEEEec
Q 024779          214 AEAIKLFGGKVT-------REPGPLPGINTKITACLDPDGWKTVFVDN  254 (262)
Q Consensus       214 ~~~l~~~g~~~~-------~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  254 (262)
                      +++|+++|+++.       .++...++| .+.++++|||||.|+|.|.
T Consensus        73 ~~~l~~~G~~~~~~~~~~~~~~~~~~~g-~~~~~~~DPdG~~ie~~~~  119 (120)
T cd08350          73 HAEFRAAGLPETGSGIPRITPPEDQPWG-MREFALVDPDGNLLRFGQP  119 (120)
T ss_pred             HHHHHHhCccccccCCCcccCCcCCCCc-eeEEEEECCCCCEEEeecC
Confidence            999999999853       344444554 4889999999999999884

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.64  E-value=4.2e-15  Score=103.67  Aligned_cols=108  Identities=23%  Similarity=0.358  Sum_probs=76.2

Q ss_pred             eEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEe--cCH
Q 024779          133 QVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGT--DDV  210 (262)
Q Consensus       133 ~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v--~dl  210 (262)
                      |+.|.|+|++++++||+++|||++....+  .    ..++..+    ...+.+......  .....+..|++|.|  +|+
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~~--~----~~~~~~~----~~~l~~~~~~~~--~~~~~~~~hiaf~v~~~d~   68 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSSS--K----EAYFELA----GLWICLMEEDSL--QGPERTYTHIAFQIQSEEF   68 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeeccC--c----eeEEEec----CeEEEeccCCCc--CCCCCCccEEEEEcCHHHH
Confidence            78999999999999999999999865432  1    1122221    234444332211  11234678999998  589


Q ss_pred             HHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEe
Q 024779          211 YKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVD  253 (262)
Q Consensus       211 ~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~  253 (262)
                      ++++++++++|+++...+..... .++.+|++||+||+|||..
T Consensus        69 ~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iEi~~  110 (113)
T cd08345          69 DEYTERLKALGVEMKPERPRVQG-EGRSIYFYDPDGHLLELHA  110 (113)
T ss_pred             HHHHHHHHHcCCccCCCccccCC-CceEEEEECCCCCEEEEEe
Confidence            99999999999998754322222 2578999999999999985

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.64  E-value=7.3e-15  Score=103.65  Aligned_cols=112  Identities=22%  Similarity=0.270  Sum_probs=78.9

Q ss_pred             eeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecC--
Q 024779          132 CQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDD--  209 (262)
Q Consensus       132 ~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~d--  209 (262)
                      .|+.|.|+|++++.+||+++||++......  +  . ..+.. ..  ....+.+...  .  ....++..|++|.|++  
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~--~--~-~~~~~-~~--~~~~~~~~~~--~--~~~~~~~~h~~f~v~~~~   70 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKVRD--D--Y-AKFLL-ED--PRLNFVLNER--P--GAPGGGLNHLGVQVDSAE   70 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEecccC--C--e-eEEEe-cC--CceEEEEecC--C--CCCCCCeeEEEEEeCCHH
Confidence            489999999999999999999998765421  1  1 12221 11  2233333321  1  1111578899999987  


Q ss_pred             -HHHHHHHHHHhCCeeecCCccCC-CCcceEEEEeCCCCcEEEEEecc
Q 024779          210 -VYKTAEAIKLFGGKVTREPGPLP-GINTKITACLDPDGWKTVFVDNV  255 (262)
Q Consensus       210 -l~~~~~~l~~~g~~~~~~~~~~~-~~~~~~~~~~DP~G~~ie~~~~~  255 (262)
                       ++++++++.++|+++..+|.... ++..+.+|++||+||.|||+++.
T Consensus        71 dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  118 (120)
T cd07254          71 EVAEAKARAEAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVTL  118 (120)
T ss_pred             HHHHHHHHHHHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEee
Confidence             78899999999999987664432 22347899999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.64  E-value=4.5e-15  Score=105.38  Aligned_cols=112  Identities=23%  Similarity=0.207  Sum_probs=77.7

Q ss_pred             eeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCC-----ccc--ccCCceeEEE
Q 024779          132 CQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGV-----TDY--DKGNAYAQIA  204 (262)
Q Consensus       132 ~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~--~~~~~~~~i~  204 (262)
                      .+++|.|+|++++++||++ |||++......++  ..  .+..+   ....+.+......     .+.  ....+..|++
T Consensus         2 ~~v~l~V~Dl~~s~~FY~~-lGf~~~~~~~~~~--~~--~~~~~---~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~l~   73 (124)
T cd09012           2 IFINLPVKDLEKSTAFYTA-LGFEFNPQFSDEK--AA--CMVIS---DNIFVMLLTEDFFQTFTPKPIADTKKSTEVLIS   73 (124)
T ss_pred             EEEEeecCCHHHHHHHHHH-CCCEEccccCCCC--eE--EEEEC---CceEEEEEcHHHHhhccCCCcccCCCCCeEEEE
Confidence            5799999999999999976 9999864322222  11  11111   1234444432110     000  1234567999


Q ss_pred             EEec---CHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEe
Q 024779          205 IGTD---DVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVD  253 (262)
Q Consensus       205 ~~v~---dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~  253 (262)
                      |.|+   |+++++++++++|+++..+|...++  ++.+|++|||||+|||+-
T Consensus        74 f~v~~~~~vd~~~~~l~~~G~~i~~~p~~~~~--~~~~~~~DPdG~~ie~~~  123 (124)
T cd09012          74 LSADSREEVDELVEKALAAGGKEFREPQDHGF--MYGRSFADLDGHLWEVLW  123 (124)
T ss_pred             EeCCCHHHHHHHHHHHHHCCCcccCCcccCCc--eEEEEEECCCCCEEEEEE
Confidence            9997   6889999999999999988877665  467899999999999973

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.64  E-value=1.6e-14  Score=101.96  Aligned_cols=112  Identities=28%  Similarity=0.437  Sum_probs=77.9

Q ss_pred             ceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCC--
Q 024779            2 LHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD--   79 (262)
Q Consensus         2 ~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d--   79 (262)
                      -||.|.|+|++++.+||+++||++...+.+    . ...|. .+..  ...+.+......    ...++.|++|.|+|  
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~----~-~~~~~-~~~~--~~~~~~~~~~~~----~~~~~~h~~f~v~~~~   70 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKVRD----D-YAKFL-LEDP--RLNFVLNERPGA----PGGGLNHLGVQVDSAE   70 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEecccC----C-eeEEE-ecCC--ceEEEEecCCCC----CCCCeeEEEEEeCCHH
Confidence            499999999999999999999998765431    1 12222 2222  222333322111    11578899999987  


Q ss_pred             -HHHHHHHHHHcCCeeecCCcccC-CCCeEEEEEECCCCCEEEEEEcC
Q 024779           80 -VAKTVELIKAKGGKVTREPGPVK-GGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        80 -~~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                       ++++++++.++|+++..++.... .+..+++++.||+||.|||+...
T Consensus        71 dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  118 (120)
T cd07254          71 EVAEAKARAEAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVTL  118 (120)
T ss_pred             HHHHHHHHHHHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEee
Confidence             78899999999999876553322 12356799999999999999753

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.64  E-value=7.4e-15  Score=103.92  Aligned_cols=113  Identities=17%  Similarity=0.170  Sum_probs=75.7

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecC-----CCCCCCCCCCceeEEE
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY-----GVDKYDIGTGFGHFGI   75 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~~~~~~~i~~   75 (262)
                      |+||+|.|+|+++|++||+. |||++.....    ....+.+..+. ..  .+.+....     .......+.+..+++|
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~-LGf~~~~~~~----~~~~~~~~~~~-~~--~l~l~~~~~~~~~~~~~~~~~~~~~~l~~   72 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRR-LGFDFPEEAD----DEPHVEAVLPG-GV--RLAWDTVESIRSFTPGWTPTGGHRIALAF   72 (122)
T ss_pred             CceEEEEeccHHHHHHHHHH-hCceecCCcC----CCCcEEEEeCC-CE--EEEEEcccceeeecCCCCCCCCCcEEEEE
Confidence            68999999999999999975 9998754322    11122333321 12  22222110     0011112234457888


Q ss_pred             EeC---CHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEE
Q 024779           76 AVD---DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  122 (262)
Q Consensus        76 ~v~---d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~  122 (262)
                      .+.   |+++++++|+++|+++..+|...++ +.+.++++||+||.|||+
T Consensus        73 ~~~~~~dvd~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~  121 (122)
T cd07235          73 LCETPAEVDALYAELVGAGYPGHKEPWDAPW-GQRYAIVKDPDGNLVDLF  121 (122)
T ss_pred             EcCCHHHHHHHHHHHHHCCCCcCCCCccCCC-CCEEEEEECCCCCEEEEe
Confidence            765   8999999999999998877776665 457788999999999986

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.63  E-value=9.3e-15  Score=103.78  Aligned_cols=113  Identities=24%  Similarity=0.340  Sum_probs=74.2

Q ss_pred             eEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCC----CCC-CCCCCCceeE--EE
Q 024779            3 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG----VDK-YDIGTGFGHF--GI   75 (262)
Q Consensus         3 hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~-~~~~~~~~~i--~~   75 (262)
                      ||+|.|+|+++|++||+++||+++.....      ....+..+  ...+.+.+.....    ... .....+..|+  ++
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~h~~~~~   73 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRSSE------TWVDFDFF--GHQLVAHLSPNFNADASDNAVDGHPVPVPHFGLIL   73 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeccC------Cccccccc--CcEEEEEeccCCCcccccCCCCCCccCCceEEEEE
Confidence            99999999999999999999999865321      11112221  1223333322110    000 1112244565  45


Q ss_pred             EeCCHHHHHHHHHHcCCeeecCCccc---CCCCeEEEEEECCCCCEEEEEE
Q 024779           76 AVDDVAKTVELIKAKGGKVTREPGPV---KGGNTVIAFIEDPDGYKFELLE  123 (262)
Q Consensus        76 ~v~d~~~~~~~l~~~G~~~~~~~~~~---~~~~~~~~~~~DP~G~~iel~~  123 (262)
                      .++|+++++++|+++|+++..+|...   ..++.+.++|.|||||.|||..
T Consensus        74 ~~~dv~~~~~~l~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~  124 (125)
T cd08357          74 SEEEFDALAERLEAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKA  124 (125)
T ss_pred             eHHHHHHHHHHHHHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEee
Confidence            67899999999999999988666432   2235688999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.62  E-value=8.8e-15  Score=103.90  Aligned_cols=113  Identities=18%  Similarity=0.216  Sum_probs=73.9

Q ss_pred             eEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCc---cc--ccCCceeEEE--E
Q 024779          133 QVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVT---DY--DKGNAYAQIA--I  205 (262)
Q Consensus       133 ~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~--~~~~~~~~i~--~  205 (262)
                      ||.|.|+|++++++||+++|||++.....      .+..+...  .....+.+.......   ..  ....+..|++  +
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~h~~~~~   73 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRSSE------TWVDFDFF--GHQLVAHLSPNFNADASDNAVDGHPVPVPHFGLIL   73 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeccC------Cccccccc--CcEEEEEeccCCCcccccCCCCCCccCCceEEEEE
Confidence            89999999999999999999999864321      11122211  112222222111000   00  1112445665  5


Q ss_pred             EecCHHHHHHHHHHhCCeeecCCccCC---CCcceEEEEeCCCCcEEEEEe
Q 024779          206 GTDDVYKTAEAIKLFGGKVTREPGPLP---GINTKITACLDPDGWKTVFVD  253 (262)
Q Consensus       206 ~v~dl~~~~~~l~~~g~~~~~~~~~~~---~~~~~~~~~~DP~G~~ie~~~  253 (262)
                      .++|+++++++|+++|+++..+|....   .+..+.+|++|||||.|||..
T Consensus        74 ~~~dv~~~~~~l~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~  124 (125)
T cd08357          74 SEEEFDALAERLEAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKA  124 (125)
T ss_pred             eHHHHHHHHHHHHHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEee
Confidence            678999999999999999998775432   122488999999999999964

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.62  E-value=7.4e-15  Score=101.74  Aligned_cols=95  Identities=29%  Similarity=0.352  Sum_probs=76.3

Q ss_pred             ceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCC--CCCCCceeEEEEeCC
Q 024779            2 LHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKY--DIGTGFGHFGIAVDD   79 (262)
Q Consensus         2 ~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~i~~~v~d   79 (262)
                      +||+|.|+|++++++||+++||++.......+.......++..++..  ..++|.++......  ..+.|++||||.|+|
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~~--~~iELi~p~~~~~~~~~~~~gi~Hia~~v~D   78 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDGP--VQIELIQPLDGDSPLDRGGGGIHHIAFEVDD   78 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTET--EEEEEEEESSTTCHHHHTSSEEEEEEEEESH
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCCc--EEEEEEEeCCCCcccccCCCCEEEEEEEeCC
Confidence            69999999999999999999999988766555666677787776533  56788776554322  267899999999999


Q ss_pred             HHHHHHHHHHcCCeeecCC
Q 024779           80 VAKTVELIKAKGGKVTREP   98 (262)
Q Consensus        80 ~~~~~~~l~~~G~~~~~~~   98 (262)
                      ++++.++|+++|+++...+
T Consensus        79 ~d~~~~~l~~~G~~~~~~~   97 (109)
T PF13669_consen   79 LDAAIARLEAQGFRVLDEG   97 (109)
T ss_dssp             HHHHHHHHHHTTECEEECE
T ss_pred             HHHHHHHHHHCCCEEcccC
Confidence            9999999999999987654

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.62  E-value=1.5e-14  Score=100.02  Aligned_cols=112  Identities=30%  Similarity=0.412  Sum_probs=84.0

Q ss_pred             eEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecCHHH
Q 024779          133 QVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYK  212 (262)
Q Consensus       133 ~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~dl~~  212 (262)
                      |+.+.|+|++++++||+++|||++........  ....++..+    +..+.+....+......+.+..|++|.|+|+++
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~~~--~~~~~~~~~----~~~i~l~~~~~~~~~~~~~~~~~~~~~v~~~~~   74 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGNGG--AEFAVLGLG----GTRLELFEGDEPAPAPSGGGGVHLAFEVDDVDA   74 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeeccCC--EEEEEEecC----CceEEEecCCCCCCcccCCCeeEEEEECCCHHH
Confidence            78999999999999999999999887654211  233444422    466777654332222235678999999999999


Q ss_pred             HHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEE
Q 024779          213 TAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVF  251 (262)
Q Consensus       213 ~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~  251 (262)
                      ++++|+++|+.+..++....+ ..+.+++.||+|+.|+|
T Consensus        75 ~~~~l~~~g~~~~~~~~~~~~-~~~~~~~~Dp~G~~~~~  112 (112)
T cd06587          75 AYERLKAAGVEVLGEPREEPW-GGRVAYFRDPDGNLIEL  112 (112)
T ss_pred             HHHHHHHcCCcccCCCcCCCC-CcEEEEEECCCCcEEeC
Confidence            999999999999887752222 35889999999999986

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.61  E-value=1.6e-14  Score=118.39  Aligned_cols=113  Identities=19%  Similarity=0.300  Sum_probs=79.5

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcc-eeeEeeecCCCceeEEEeeecCCCCCCCCCCC-ceeEEEEeC
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKY-TNAFLGYGPEDSHFVIELTYNYGVDKYDIGTG-FGHFGIAVD   78 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~i~~~v~   78 (262)
                      |+||+|.|+|++++.+||+++|||++......+.+.. ...|+..+....  .+.+...       .+.| ++|+||.|+
T Consensus       146 i~Hi~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-------~~~g~~~Hiaf~v~  216 (303)
T TIGR03211       146 LDHCLLYGEDVAENTRFFTEVLGFRLTEQVVLGDGKEQAAAWLSVSNKAH--DIAFVGD-------PEPGKLHHVSFFLD  216 (303)
T ss_pred             EEEEeEEeCCHHHHHHHHHHhcCCEEEeeEEcCCCcEEEEEEEEcCCCCc--ccceecC-------CCCCceEEEEEEcC
Confidence            5899999999999999999999999876543323222 344554432211  1111111       1234 889999999


Q ss_pred             C---HHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEE
Q 024779           79 D---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  122 (262)
Q Consensus        79 d---~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~  122 (262)
                      |   +++++++|+++|+++..+|.....+..+++||.||+||.||+.
T Consensus       217 ~~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~  263 (303)
T TIGR03211       217 SWEDVLKAADVMSKNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETF  263 (303)
T ss_pred             CHHHHHHHHHHHHhCCCceeeCCcccCCCCceEEEEECCCCCEEEEe
Confidence            7   5557889999999987666544333457899999999999998

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.61  E-value=2.1e-14  Score=100.05  Aligned_cols=108  Identities=24%  Similarity=0.250  Sum_probs=73.5

Q ss_pred             CceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecC
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDD  209 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~d  209 (262)
                      +|+|+.|.|+|++++.+||+ +|||++....+     . ..+...+  ..+..+.+....     ..+....++.+.++|
T Consensus         2 ~i~hv~l~v~d~~~s~~FY~-~lG~~~~~~~~-----~-~~~~~~~--~~~~~~~~~~~~-----~~~~~~~~~~~~~~d   67 (112)
T cd08344           2 SIDHFALEVPDLEVARRFYE-AFGLDVREEGD-----G-LELRTAG--NDHRWARLLEGA-----RKRLAYLSFGIFEDD   67 (112)
T ss_pred             ceeEEEEecCCHHHHHHHHH-HhCCcEEeecC-----c-eEEEecC--CCceEEEeecCC-----CCceeeEEEEeEhhh
Confidence            68999999999999999997 69999865421     1 1222211  133444443211     111223344555689


Q ss_pred             HHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEec
Q 024779          210 VYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDN  254 (262)
Q Consensus       210 l~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  254 (262)
                      +++++++|+++|+++..++  .+++ .+.+|++||+||.|||..-
T Consensus        68 ~~~~~~~l~~~Gi~~~~~~--~~~~-~~~~~~~DP~Gn~iel~~~  109 (112)
T cd08344          68 FAAFARHLEAAGVALAAAP--PGAD-PDGVWFRDPDGNLLQVKVA  109 (112)
T ss_pred             HHHHHHHHHHcCCceecCC--CcCC-CCEEEEECCCCCEEEEecC
Confidence            9999999999999988665  2222 3578999999999999853

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.61  E-value=2.9e-14  Score=99.34  Aligned_cols=106  Identities=23%  Similarity=0.321  Sum_probs=72.1

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCcee--EEEEeC
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGH--FGIAVD   78 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--i~~~v~   78 (262)
                      |+||.|.|+|++++++||+ +|||++..+.+      ...+...+.  .+..+.+....       ..++.|  +.+.++
T Consensus         3 i~hv~l~v~d~~~s~~FY~-~lG~~~~~~~~------~~~~~~~~~--~~~~~~~~~~~-------~~~~~~~~~~~~~~   66 (112)
T cd08344           3 IDHFALEVPDLEVARRFYE-AFGLDVREEGD------GLELRTAGN--DHRWARLLEGA-------RKRLAYLSFGIFED   66 (112)
T ss_pred             eeEEEEecCCHHHHHHHHH-HhCCcEEeecC------ceEEEecCC--CceEEEeecCC-------CCceeeEEEEeEhh
Confidence            6899999999999999998 69999865431      122222222  22233333221       123334  455568


Q ss_pred             CHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcC
Q 024779           79 DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        79 d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                      |+++++++|+++|+++..++  ... ..+.++|.||+||.|||....
T Consensus        67 d~~~~~~~l~~~Gi~~~~~~--~~~-~~~~~~~~DP~Gn~iel~~~~  110 (112)
T cd08344          67 DFAAFARHLEAAGVALAAAP--PGA-DPDGVWFRDPDGNLLQVKVAE  110 (112)
T ss_pred             hHHHHHHHHHHcCCceecCC--CcC-CCCEEEEECCCCCEEEEecCC
Confidence            99999999999999987654  222 345689999999999998543

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.61  E-value=3.4e-14  Score=99.27  Aligned_cols=108  Identities=27%  Similarity=0.342  Sum_probs=77.2

Q ss_pred             EEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCC-CCCCCCCceeEEEEeCC---
Q 024779            4 VVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD-KYDIGTGFGHFGIAVDD---   79 (262)
Q Consensus         4 v~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~i~~~v~d---   79 (262)
                      +.|.|+|+++|++||+++||+++.....    .  .+.+..++ .  ..+.+....... ......+..|++|.+++   
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~~~----~--~~~~~~~~-~--~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~   72 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVELSP----T--FALFVLGS-G--VKLGLWSRHTVEPASDATGGGSELAFMVDDGAA   72 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCCCC----c--eEEEEeCC-C--cEEEEeeccccCCCCCCCCCceEEEEEcCCHHH
Confidence            6799999999999999999999765321    1  23333322 1  234444432221 11234467899999986   


Q ss_pred             HHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEE
Q 024779           80 VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  122 (262)
Q Consensus        80 ~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~  122 (262)
                      ++++++++.++|+++..+|....+|  +.++|.|||||.|||+
T Consensus        73 ~~~~~~~~~~~g~~v~~~~~~~~~g--~~~~~~DPdGn~ie~~  113 (114)
T cd07261          73 VDALYAEWQAKGVKIIQEPTEMDFG--YTFVALDPDGHRLRVF  113 (114)
T ss_pred             HHHHHHHHHHCCCeEecCccccCCc--cEEEEECCCCCEEEee
Confidence            8889999999999998877666543  5688999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.60  E-value=5.2e-14  Score=97.25  Aligned_cols=112  Identities=34%  Similarity=0.435  Sum_probs=82.4

Q ss_pred             eEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCHHH
Q 024779            3 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAK   82 (262)
Q Consensus         3 hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~~~   82 (262)
                      |+.|.|+|++++.+||+++||+++......  ......++..+  .  ..+.+...........+.+..|++|.|+|+++
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~--~~~~~~~~~~~--~--~~i~l~~~~~~~~~~~~~~~~~~~~~v~~~~~   74 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGN--GGAEFAVLGLG--G--TRLELFEGDEPAPAPSGGGGVHLAFEVDDVDA   74 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeecc--CCEEEEEEecC--C--ceEEEecCCCCCCcccCCCeeEEEEECCCHHH
Confidence            899999999999999999999998876531  12234444433  2  24555543322221245678899999999999


Q ss_pred             HHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEE
Q 024779           83 TVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL  121 (262)
Q Consensus        83 ~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel  121 (262)
                      ++++|.++|+.+..++.... ++.+.+++.||+|+.|+|
T Consensus        75 ~~~~l~~~g~~~~~~~~~~~-~~~~~~~~~Dp~G~~~~~  112 (112)
T cd06587          75 AYERLKAAGVEVLGEPREEP-WGGRVAYFRDPDGNLIEL  112 (112)
T ss_pred             HHHHHHHcCCcccCCCcCCC-CCcEEEEEECCCCcEEeC
Confidence            99999999998876654222 367889999999999985

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.60  E-value=4.5e-14  Score=98.21  Aligned_cols=109  Identities=28%  Similarity=0.348  Sum_probs=77.6

Q ss_pred             EEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCHHHHH
Q 024779            5 VYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTV   84 (262)
Q Consensus         5 ~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~~~~~   84 (262)
                      .|.|+|++++++||+++|||++.....  ..  ..+++..+  .  ..+.+......... ...+..|++|.++|+++++
T Consensus         3 ~i~v~d~~~s~~FY~~~lg~~~~~~~~--~~--~~~~~~~~--~--~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   73 (112)
T cd08349           3 VLPVSDIERSLAFYRDVLGFEVDWEHP--EP--GYAFLSRG--G--AQLMLSEHDGDEPV-PLGRGGSVYIEVEDVDALY   73 (112)
T ss_pred             EEEECCHHHHHHHHHhccCeEEEEEcC--CC--cEEEEEeC--C--EEEEEeccCCCCCC-CCCCcEEEEEEeCCHHHHH
Confidence            689999999999999999999877643  11  23444432  2  23444433222111 2345558999999999999


Q ss_pred             HHHHHcCCe-eecCCcccCCCCeEEEEEECCCCCEEEEEE
Q 024779           85 ELIKAKGGK-VTREPGPVKGGNTVIAFIEDPDGYKFELLE  123 (262)
Q Consensus        85 ~~l~~~G~~-~~~~~~~~~~~~~~~~~~~DP~G~~iel~~  123 (262)
                      +++.+.|++ +..++....+ +.+.+++.||+|+.|+|+|
T Consensus        74 ~~l~~~G~~~~~~~~~~~~~-g~~~~~~~DP~G~~ie~~~  112 (112)
T cd08349          74 AELKAKGADLIVYPPEDQPW-GMREFAVRDPDGNLLRFGE  112 (112)
T ss_pred             HHHHHcCCcceecCccCCCc-ccEEEEEECCCCCEEEecC
Confidence            999999998 5555554443 5578899999999999974

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.60  E-value=6.7e-14  Score=96.79  Aligned_cols=117  Identities=27%  Similarity=0.333  Sum_probs=83.7

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCH
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDV   80 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~   80 (262)
                      +.|..|.++|++++++||+++|||+.......  +......+..+.....-  -+...   +....+.....+.|.|+|+
T Consensus        10 i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~~--~~~~y~~f~~~~~~~gG--~l~~~---~~~~p~~~~~~iy~~v~di   82 (127)
T COG3324          10 IVWFELPVSDLERAKAFYEKVFGWTFEDYFDM--GEMRYAVFPADGAGAGG--GLMAR---PGSPPGGGGWVIYFAVDDI   82 (127)
T ss_pred             cEEEeeecCCHHHHHHHHHHhhCceecccccC--CCceEEEEECCCccccc--eeccC---CcCCCCCCCEEEEEecCCh
Confidence            46889999999999999999999999876443  22233333332211100  11111   1111113444689999999


Q ss_pred             HHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcC
Q 024779           81 AKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        81 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                      ++..+|+.++|.+++.++.+.+. .++.+.+.||.||+|.|++..
T Consensus        83 d~~l~rv~~~GG~V~~p~~~~p~-~G~~a~~~Dp~Gn~~~l~s~~  126 (127)
T COG3324          83 DATLERVVAAGGKVLRPKTEFPG-GGRIAHFVDPEGNRFGLWSPA  126 (127)
T ss_pred             HHHHHHHHhcCCeEEecccccCC-ceEEEEEECCCCCEEEEeecC
Confidence            99999999999999999988885 678899999999999999753

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.59  E-value=7.3e-14  Score=98.53  Aligned_cols=108  Identities=21%  Similarity=0.174  Sum_probs=74.4

Q ss_pred             eEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCHHH
Q 024779            3 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAK   82 (262)
Q Consensus         3 hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~~~   82 (262)
                      ...|.|+|+++|++||++ |||++..+..  .   ..+++..++    ..+.+.......   ......+++|.|+|+++
T Consensus         5 ~~~l~v~Dl~~s~~FY~~-lG~~~~~~~~--~---~~~~~~~~~----~~l~l~~~~~~~---~~~~~~~~~~~v~dvd~   71 (120)
T cd08350           5 IPNLPSRDLDATEAFYAR-LGFSVGYRQA--A---GYMILRRGD----LELHFFAHPDLD---PATSPFGCCLRLPDVAA   71 (120)
T ss_pred             cceeEcCCHHHHHHHHHH-cCCEEEecCC--C---CEEEEEcCC----EEEEEEecCcCC---CCCCcceEEEEeCCHHH
Confidence            357899999999999999 9999876532  1   123333332    234444322111   11223468999999999


Q ss_pred             HHHHHHHcCCeee-------cCCcccCCCCeEEEEEECCCCCEEEEEEc
Q 024779           83 TVELIKAKGGKVT-------REPGPVKGGNTVIAFIEDPDGYKFELLER  124 (262)
Q Consensus        83 ~~~~l~~~G~~~~-------~~~~~~~~~~~~~~~~~DP~G~~iel~~~  124 (262)
                      ++++|+++|+++.       .++...++ +.+.++|.|||||.|+|.+.
T Consensus        72 ~~~~l~~~G~~~~~~~~~~~~~~~~~~~-g~~~~~~~DPdG~~ie~~~~  119 (120)
T cd08350          72 LHAEFRAAGLPETGSGIPRITPPEDQPW-GMREFALVDPDGNLLRFGQP  119 (120)
T ss_pred             HHHHHHHhCccccccCCCcccCCcCCCC-ceeEEEEECCCCCEEEeecC
Confidence            9999999999742       23333333 67889999999999999874

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.58  E-value=1e-14  Score=102.19  Aligned_cols=72  Identities=26%  Similarity=0.344  Sum_probs=54.6

Q ss_pred             ceEEEEeeecCCcccc-----c----CCceeEEEEEecCHHHHHHHHHHhCCeeecCCccCCCCcc-eEEEEeCCCCcEE
Q 024779          180 NVVLELTYNYGVTDYD-----K----GNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINT-KITACLDPDGWKT  249 (262)
Q Consensus       180 ~~~~~l~~~~~~~~~~-----~----~~~~~~i~~~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~-~~~~~~DP~G~~i  249 (262)
                      +..++|..+++....+     +    +.|.+||||.|+|++.+.++|++.|+++.+.|   +.|.. .++++.||||++|
T Consensus        87 ~~~~ELthn~Gtes~~~~~~~ngN~~prGfgHIci~V~di~sac~~lkekGV~f~Kk~---~dGk~K~iaF~~dpDgywi  163 (170)
T KOG2944|consen   87 NAKLELTHNWGTESPPDQAYLNGNKEPRGFGHICIEVDDINSACERLKEKGVRFKKKL---KDGKMKPIAFLHDPDGYWI  163 (170)
T ss_pred             cCceeeecCCCCCCCcchhhcCCCCCCCccceEEEEeCCHHHHHHHHHHhCceeeecC---CCccccceeEEECCCCCeE
Confidence            4556777655544322     1    24999999999999999999999999987554   23333 5799999999999


Q ss_pred             EEEec
Q 024779          250 VFVDN  254 (262)
Q Consensus       250 e~~~~  254 (262)
                      |+.-.
T Consensus       164 ei~~~  168 (170)
T KOG2944|consen  164 EIELE  168 (170)
T ss_pred             EEeec
Confidence            99764

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.58  E-value=5.5e-14  Score=99.75  Aligned_cols=113  Identities=26%  Similarity=0.265  Sum_probs=76.5

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCC-----C-CC-CCCCCCceeE
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG-----V-DK-YDIGTGFGHF   73 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~-~~-~~~~~~~~~i   73 (262)
                      +.+|.|.|+|+++|++||++ |||+......  ...  ..++..++ .  ..+.+.....     . +. ...+.+..|+
T Consensus         1 ~~~v~l~V~Dl~~s~~FY~~-lGf~~~~~~~--~~~--~~~~~~~~-~--~~l~l~~~~~~~~~~~~~~~~~~~~~~~~l   72 (124)
T cd09012           1 MIFINLPVKDLEKSTAFYTA-LGFEFNPQFS--DEK--AACMVISD-N--IFVMLLTEDFFQTFTPKPIADTKKSTEVLI   72 (124)
T ss_pred             CEEEEeecCCHHHHHHHHHH-CCCEEccccC--CCC--eEEEEECC-c--eEEEEEcHHHHhhccCCCcccCCCCCeEEE
Confidence            46899999999999999987 8999764322  111  23333332 1  2333332110     0 00 0123345689


Q ss_pred             EEEeC---CHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEE
Q 024779           74 GIAVD---DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  123 (262)
Q Consensus        74 ~~~v~---d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~  123 (262)
                      +|.|+   ++++++++++++|+++..+|....  ..+.++|.|||||.||++.
T Consensus        73 ~f~v~~~~~vd~~~~~l~~~G~~i~~~p~~~~--~~~~~~~~DPdG~~ie~~~  123 (124)
T cd09012          73 SLSADSREEVDELVEKALAAGGKEFREPQDHG--FMYGRSFADLDGHLWEVLW  123 (124)
T ss_pred             EEeCCCHHHHHHHHHHHHHCCCcccCCcccCC--ceEEEEEECCCCCEEEEEE
Confidence            99998   588999999999999987776554  3467899999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.58  E-value=7.7e-14  Score=113.89  Aligned_cols=115  Identities=27%  Similarity=0.426  Sum_probs=79.3

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCC-
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD-   79 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d-   79 (262)
                      |+||+|.|+|++++++||+++||+++........+.....|+..+...+  .+.+..       ..+.+++|+||.|+| 
T Consensus       137 i~Hv~l~v~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-------~~~~~~~Hiaf~v~d~  207 (294)
T TIGR02295       137 LDHFNVFVPDVQRALRFYKEELGFRVTEYTEDDEGNLAAAWLHRKGGVH--DIALTN-------GNGPRLHHIAYWVHDP  207 (294)
T ss_pred             eeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCcEEEEEEecCCCcC--ceEeec-------CCCCceeeEEEEcCCH
Confidence            5899999999999999999999999876543222322234443322211  222221       123588999999998 


Q ss_pred             --HHHHHHHHHHcCCe--eecCCcccCCCCeEEEEEECCCCCEEEEEEc
Q 024779           80 --VAKTVELIKAKGGK--VTREPGPVKGGNTVIAFIEDPDGYKFELLER  124 (262)
Q Consensus        80 --~~~~~~~l~~~G~~--~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  124 (262)
                        +++++++|+++|++  +...|.....+...++|+.||+|+.||++..
T Consensus       208 ~~v~~~~~~l~~~G~~~~~~~~p~~~~~~~~~~~y~~DP~G~~iEl~~~  256 (294)
T TIGR02295       208 LNIIKACDILASAGLSDSIERGPGRHGVSNAFFLYLRDPDGHRIELYTG  256 (294)
T ss_pred             HHHHHHHHHHHhCCCCcccccCCccCCCCcceEEEEECCCCCEEEEEec
Confidence              45568999999987  5444433332345679999999999999864

The enzyme from Bacillus brevis contains manganese.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.58  E-value=8.1e-14  Score=113.24  Aligned_cols=114  Identities=25%  Similarity=0.401  Sum_probs=80.8

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCC-c--ceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEe
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEE-K--YTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV   77 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v   77 (262)
                      |+||+|.|+|++++.+||+++|||++........+ +  +..+|+..+....  .+.+...      ....+++|++|.|
T Consensus       143 l~Hv~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~~~g~~~~~~~l~~~~~~~--~~~l~~~------~~~~~~~Hiaf~v  214 (286)
T TIGR03213       143 LGHIVLRVPDVDAALAFYTEVLGFQLSDVIDLPAGPGVTVRPYFLHCNERHH--SLAFAAG------PSEKRLNHLMLEV  214 (286)
T ss_pred             ccEEEEEcCCHHHHHHHHHHccCCeEEEeEcccCCCCCcceEEEEEECCCcc--eEEEecC------CCCCceEEEEEEc
Confidence            68999999999999999999999998765322111 1  2345665544322  2222211      1245789999999


Q ss_pred             CCHHH---HHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEE
Q 024779           78 DDVAK---TVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  123 (262)
Q Consensus        78 ~d~~~---~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~  123 (262)
                      +|.++   ++++|+++|+ ....+.....+...++|+.||+|++||+..
T Consensus       215 ~d~~~v~~~~~~l~~~G~-~~~~~~r~~~~~~~~~y~~DP~G~~iE~~~  262 (286)
T TIGR03213       215 DTLDDVGLALDRVDADGI-VASTLGRHTNDHMVSFYVATPSGWLVEYGW  262 (286)
T ss_pred             CCHHHHHHHHHHHHHCCC-EEecCCcCCCCCeEEEEEECCCCcEEEeec
Confidence            98766   7999999999 443443333346788999999999999985

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.58  E-value=4.3e-14  Score=98.58  Aligned_cols=104  Identities=23%  Similarity=0.252  Sum_probs=73.1

Q ss_pred             EEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecCHHHH
Q 024779          134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKT  213 (262)
Q Consensus       134 v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~dl~~~  213 (262)
                      ..|.|+|++++++||++ |||++....+      ...++..+    ...+.+.....    ....+..+++|.|+|++++
T Consensus         5 ~~l~v~Dl~~s~~FY~~-LGf~~~~~~~------~~~~l~~~----~~~l~l~~~~~----~~~~~~~~~~~~v~did~~   69 (113)
T cd08356           5 PFIPAKDFAESKQFYQA-LGFELEWEND------NLAYFRLG----NCAFYLQDYYV----KDWAENSMLHLEVDDLEAY   69 (113)
T ss_pred             eccccccHHHHHHHHHH-hCCeeEecCC------CEEEEEcC----CEEEEeecCCC----cccccCCEEEEEECCHHHH
Confidence            46789999999999987 9999976531      22444432    23344432111    1123346789999999999


Q ss_pred             HHHHHHhCCeee-----cCCccCCCCcceEEEEeCCCCcEEEEEe
Q 024779          214 AEAIKLFGGKVT-----REPGPLPGINTKITACLDPDGWKTVFVD  253 (262)
Q Consensus       214 ~~~l~~~g~~~~-----~~~~~~~~~~~~~~~~~DP~G~~ie~~~  253 (262)
                      +++|+++|+++.     .++...++| .+.++++|||||+|+|.|
T Consensus        70 ~~~l~~~G~~~~~~~~~~~~~~~~~g-~r~f~~~DPdGn~~~~~~  113 (113)
T cd08356          70 YEHIKALGLPKKFPGVKLPPITQPWW-GREFFLHDPSGVLWHIGQ  113 (113)
T ss_pred             HHHHHHcCCcccccceecCccccCCC-cEEEEEECCCccEEEeeC
Confidence            999999998753     234444554 489999999999999865

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=99.56  E-value=3.4e-14  Score=106.14  Aligned_cols=121  Identities=39%  Similarity=0.736  Sum_probs=105.3

Q ss_pred             CCCCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcC-----------ccceeeeeccCCCCcceEEEEeeecCCcccc
Q 024779          127 TPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPE-----------YKYTIAMMGYGPEDKNVVLELTYNYGVTDYD  195 (262)
Q Consensus       127 ~~~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  195 (262)
                      ...+.-|+++.|.|.+++++||+++|||++.+..+++.           +.|+-.+++++|.++|..++|+++++...+.
T Consensus        14 ~~~r~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViELTYNYgV~~Ye   93 (299)
T KOG2943|consen   14 DTRRALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIELTYNYGVSKYE   93 (299)
T ss_pred             cchheeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEEEeccCcccee
Confidence            34678899999999999999999999999998877765           6888899999999999999999999999999


Q ss_pred             cCCceeEEEEEecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          196 KGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       196 ~~~~~~~i~~~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                      -|.++.||.+.++|+-..++.++..|.+..         ..-++.+.||||+.|+++++.+
T Consensus        94 lGndfg~i~I~s~dv~~~ve~v~~p~~~~~---------g~~~~~v~dPdGykF~l~~~~p  145 (299)
T KOG2943|consen   94 LGNDFGGITIASDDVFSKVEKVNAPGGKGS---------GCGIAFVKDPDGYKFYLIDRGP  145 (299)
T ss_pred             ccCCcccEEEeHHHHHHHHHHhcCcCCccc---------ceEEEEEECCCCcEEEEeccCC
Confidence            999999999999999988888887665321         1356889999999999997543

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.55  E-value=1.4e-13  Score=97.15  Aligned_cols=110  Identities=21%  Similarity=0.197  Sum_probs=77.0

Q ss_pred             EEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCC-----cc-cccCCceeEEEEEe
Q 024779          134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGV-----TD-YDKGNAYAQIAIGT  207 (262)
Q Consensus       134 v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~-~~~~~~~~~i~~~v  207 (262)
                      |.|.|+|++++.+||+++|||++....   ..  ...++..    .+..+.+......     .+ ...+.+..+++|.+
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~~---~~--~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSADS---ND--GVAFFQL----GGLVLALFPREELAKDAGVPVPPPGFSGITLAHNV   72 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceecccC---CC--ceEEEEc----CCeEEEEecchhhhhhcCCCCCCCCccceEEEEEc
Confidence            689999999999999999999986551   11  2233432    1244555432110     00 11223444566654


Q ss_pred             ---cCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEe
Q 024779          208 ---DDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVD  253 (262)
Q Consensus       208 ---~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~  253 (262)
                         +|++++++++++.|+++..+|...+++ ++.++++||+||+|||..
T Consensus        73 ~~~~d~~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DP~Gn~iei~~  120 (121)
T cd07251          73 RSEEEVDAVLARAAAAGATIVKPPQDVFWG-GYSGYFADPDGHLWEVAH  120 (121)
T ss_pred             CCHHHHHHHHHHHHhCCCEEecCCccCCCC-ceEEEEECCCCCEEEEee
Confidence               689999999999999999887766665 588999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.54  E-value=6.3e-14  Score=97.05  Aligned_cols=95  Identities=23%  Similarity=0.269  Sum_probs=75.5

Q ss_pred             eeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcc--cccCCceeEEEEEecC
Q 024779          132 CQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD--YDKGNAYAQIAIGTDD  209 (262)
Q Consensus       132 ~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~i~~~v~d  209 (262)
                      +||.+.|+|++++++||+++||++.......+.......++..+.  +...++|++..+..+  ...+.+++||+|.|+|
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~--~~~~iELi~p~~~~~~~~~~~~gi~Hia~~v~D   78 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGD--GPVQIELIQPLDGDSPLDRGGGGIHHIAFEVDD   78 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETT--ETEEEEEEEESSTTCHHHHTSSEEEEEEEEESH
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCC--CcEEEEEEEeCCCCcccccCCCCEEEEEEEeCC
Confidence            599999999999999999999999877655555555666666442  237889998655432  2367899999999999


Q ss_pred             HHHHHHHHHHhCCeeecCC
Q 024779          210 VYKTAEAIKLFGGKVTREP  228 (262)
Q Consensus       210 l~~~~~~l~~~g~~~~~~~  228 (262)
                      +++++++|+++|+++...+
T Consensus        79 ~d~~~~~l~~~G~~~~~~~   97 (109)
T PF13669_consen   79 LDAAIARLEAQGFRVLDEG   97 (109)
T ss_dssp             HHHHHHHHHHTTECEEECE
T ss_pred             HHHHHHHHHHCCCEEcccC
Confidence            9999999999999988654

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.53  E-value=2.9e-13  Score=94.40  Aligned_cols=104  Identities=23%  Similarity=0.289  Sum_probs=71.4

Q ss_pred             EEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCHHHH
Q 024779            4 VVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKT   83 (262)
Q Consensus         4 v~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~~~~   83 (262)
                      ..|.|+|++++++||++ |||++..+..      ..+++..+.  .  .+.+..... ...   .+-.+++|.|+|++++
T Consensus         5 ~~l~v~Dl~~s~~FY~~-LGf~~~~~~~------~~~~l~~~~--~--~l~l~~~~~-~~~---~~~~~~~~~v~did~~   69 (113)
T cd08356           5 PFIPAKDFAESKQFYQA-LGFELEWEND------NLAYFRLGN--C--AFYLQDYYV-KDW---AENSMLHLEVDDLEAY   69 (113)
T ss_pred             eccccccHHHHHHHHHH-hCCeeEecCC------CEEEEEcCC--E--EEEeecCCC-ccc---ccCCEEEEEECCHHHH
Confidence            35789999999999988 9999986532      235555442  2  223322111 111   1234689999999999


Q ss_pred             HHHHHHcCCeee-----cCCcccCCCCeEEEEEECCCCCEEEEEE
Q 024779           84 VELIKAKGGKVT-----REPGPVKGGNTVIAFIEDPDGYKFELLE  123 (262)
Q Consensus        84 ~~~l~~~G~~~~-----~~~~~~~~~~~~~~~~~DP~G~~iel~~  123 (262)
                      +++|+++|+++.     .++....+ +.+.++|.|||||.|+|.+
T Consensus        70 ~~~l~~~G~~~~~~~~~~~~~~~~~-g~r~f~~~DPdGn~~~~~~  113 (113)
T cd08356          70 YEHIKALGLPKKFPGVKLPPITQPW-WGREFFLHDPSGVLWHIGQ  113 (113)
T ss_pred             HHHHHHcCCcccccceecCccccCC-CcEEEEEECCCccEEEeeC
Confidence            999999998643     23333344 5688999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.52  E-value=2.8e-13  Score=95.54  Aligned_cols=110  Identities=25%  Similarity=0.341  Sum_probs=75.2

Q ss_pred             EEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecC------CCCCCCCCCCceeEEEEe
Q 024779            4 VVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY------GVDKYDIGTGFGHFGIAV   77 (262)
Q Consensus         4 v~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~~~~~~~~~~i~~~v   77 (262)
                      |.|.|+|++++.+||+++|||++..+.   ..  ...++..+.    ..+.+....      .......+.+..++++.+
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~~---~~--~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSADS---ND--GVAFFQLGG----LVLALFPREELAKDAGVPVPPPGFSGITLAHNV   72 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceecccC---CC--ceEEEEcCC----eEEEEecchhhhhhcCCCCCCCCccceEEEEEc
Confidence            789999999999999999999986551   11  233444332    234443211      111112222334466655


Q ss_pred             ---CCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEE
Q 024779           78 ---DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  123 (262)
Q Consensus        78 ---~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~  123 (262)
                         +|++++++++++.|+++..++...++ +.+.+++.||+||+||+..
T Consensus        73 ~~~~d~~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DP~Gn~iei~~  120 (121)
T cd07251          73 RSEEEVDAVLARAAAAGATIVKPPQDVFW-GGYSGYFADPDGHLWEVAH  120 (121)
T ss_pred             CCHHHHHHHHHHHHhCCCEEecCCccCCC-CceEEEEECCCCCEEEEee
Confidence               57999999999999999877665554 4778999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.51  E-value=3.4e-13  Score=103.66  Aligned_cols=119  Identities=19%  Similarity=0.225  Sum_probs=92.4

Q ss_pred             CCCCCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcc-cccCCceeEEE
Q 024779          126 PTPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD-YDKGNAYAQIA  204 (262)
Q Consensus       126 ~~~~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~i~  204 (262)
                      ..+..++.++|.|+|++++..||+++||+++..+.+      ....+..+   +...+.|.+...... .+...|..|++
T Consensus         6 ~~~~~v~~v~L~vrdL~~~~~FY~~ilGL~v~~~~~------~~v~L~vg---g~~LL~L~q~~~a~~~~~~~aGLyH~A   76 (265)
T COG2514           6 TTPTFVGAVTLNVRDLDSMTSFYQEILGLQVLEETD------GSVTLGVG---GTPLLTLEQFPDARRPPPRAAGLYHTA   76 (265)
T ss_pred             CCCcEEEEEEEEeccHHHHHHHHHHhhCCeeeeccC------ceEEEeeC---CEEEEEEEeCCCCCCCCccccceeeee
Confidence            345678999999999999999999999999987654      22344433   236677776544433 34567999999


Q ss_pred             EEec---CHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          205 IGTD---DVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       205 ~~v~---dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                      |.++   |+.+.+.++.+.|+.+. ++.++..  .-..|+.||+||-||++.+++
T Consensus        77 fLlP~r~~L~~~l~hl~~~~~~l~-Ga~DH~v--SEAlYl~DPEGNGIEiYaDrp  128 (265)
T COG2514          77 FLLPTREDLARVLNHLAEEGIPLV-GASDHLV--SEALYLEDPEGNGIEIYADRP  128 (265)
T ss_pred             eecCCHHHHHHHHHHHHhcCCccc-ccCcchh--heeeeecCCCCCeEEEEecCC
Confidence            9986   67788889999999887 5566666  467999999999999999865

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.46  E-value=2.2e-12  Score=90.59  Aligned_cols=117  Identities=36%  Similarity=0.537  Sum_probs=77.9

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCC--------------------CcceeeEeeecCCCceeEEEeeecCC
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPE--------------------EKYTNAFLGYGPEDSHFVIELTYNYG   60 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~l~~~~~~~   60 (262)
                      ++|.++.+.|+.++..||+.++|+.+........                    .... .|....+.    .+++..+-+
T Consensus        23 ~~~t~~rvkd~~~Sl~fytr~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~~~~~~~-v~~~~~~~----~~ELthn~G   97 (170)
T KOG2944|consen   23 LQQTMLRVKDPTGSLKFYTRVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPKPEHGVS-VFVFSRNA----KLELTHNWG   97 (170)
T ss_pred             hhhceeecccchhhhhhhhhhccceeechhhhhHhhhHHHhhcccccccCccCCCCCc-eEEecccC----ceeeecCCC
Confidence            3577888888888888888888887764432111                    1111 33333322    344444322


Q ss_pred             CC--C---CC----CCCCceeEEEEeCCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEc
Q 024779           61 VD--K---YD----IGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  124 (262)
Q Consensus        61 ~~--~---~~----~~~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  124 (262)
                      ..  +   +.    .+.|++||||.|+|+.+++.+|+++|++..+.+.+..  .-..+|+.||||+.|||...
T Consensus        98 tes~~~~~~~ngN~~prGfgHIci~V~di~sac~~lkekGV~f~Kk~~dGk--~K~iaF~~dpDgywiei~~~  168 (170)
T KOG2944|consen   98 TESPPDQAYLNGNKEPRGFGHICIEVDDINSACERLKEKGVRFKKKLKDGK--MKPIAFLHDPDGYWIEIELE  168 (170)
T ss_pred             CCCCcchhhcCCCCCCCccceEEEEeCCHHHHHHHHHHhCceeeecCCCcc--ccceeEEECCCCCeEEEeec
Confidence            11  1   11    2359999999999999999999999999765543332  23678899999999999854

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=99.41  E-value=1.7e-12  Score=98.78  Aligned_cols=98  Identities=20%  Similarity=0.326  Sum_probs=74.3

Q ss_pred             CCceeEEeeec--ChhhhHHHHHHhcCCeeeeeccCcC--ccceeeeeccCCCCcceEEEEeeecCC-cc--------cc
Q 024779          129 EPLCQVMLRVG--DLDRSINFYEQAFGMELLRKRDNPE--YKYTIAMMGYGPEDKNVVLELTYNYGV-TD--------YD  195 (262)
Q Consensus       129 ~~~~~v~l~v~--d~~~~~~FY~~~lG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~--------~~  195 (262)
                      .+++||++.|+  |++++++||+++|||+.......++  .......+..  ..+...++|.+.... ..        ..
T Consensus         2 ~~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~--~~g~i~l~L~~~~~~~~~s~~~~fl~~~   79 (191)
T cd07250           2 TRIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLAS--PDGKIRIPLNEPASGKRKSQIQEFLEYY   79 (191)
T ss_pred             ceeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEEC--CCCcEEEEEecCCCCCCccHHHHHHHHh
Confidence            36899999999  9999999999999999887655433  2233333332  235677777764432 11        22


Q ss_pred             cCCceeEEEEEecCHHHHHHHHHHhCCeeecCC
Q 024779          196 KGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREP  228 (262)
Q Consensus       196 ~~~~~~~i~~~v~dl~~~~~~l~~~g~~~~~~~  228 (262)
                      .++|++||||.|+|+++++++|+++|++++..|
T Consensus        80 ~G~Gv~HIAf~vdDI~~~~~~L~~~Gv~~l~~P  112 (191)
T cd07250          80 GGAGVQHIALATDDIFATVAALRARGVEFLPIP  112 (191)
T ss_pred             CCCceeEEEEECCCHHHHHHHHHHcCCeeccCc
Confidence            468999999999999999999999999999877

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=99.37  E-value=6.5e-12  Score=95.56  Aligned_cols=98  Identities=27%  Similarity=0.381  Sum_probs=71.2

Q ss_pred             CceEEEEeC--CHHHHHHHHHhhcCcEEEEEecCCC--CcceeeEeeecCCCceeEEEeeecCCC-C--------CCCCC
Q 024779            1 MLHVVYRVG--DLDRTIKFYTECLGMKLLRKRDIPE--EKYTNAFLGYGPEDSHFVIELTYNYGV-D--------KYDIG   67 (262)
Q Consensus         1 l~hv~l~v~--d~~~a~~fY~~~lG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~-~--------~~~~~   67 (262)
                      |+||++.|+  |++++.+||+++|||+.......++  .......+..+.  ..+.+++..+... .        ....+
T Consensus         4 iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~--g~i~l~L~~~~~~~~~s~~~~fl~~~~G   81 (191)
T cd07250           4 IDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPD--GKIRIPLNEPASGKRKSQIQEFLEYYGG   81 (191)
T ss_pred             eeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCC--CcEEEEEecCCCCCCccHHHHHHHHhCC
Confidence            689999999  9999999999999999887764433  222233333222  3445666653321 1        11246


Q ss_pred             CCceeEEEEeCCHHHHHHHHHHcCCeeecCCcc
Q 024779           68 TGFGHFGIAVDDVAKTVELIKAKGGKVTREPGP  100 (262)
Q Consensus        68 ~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~  100 (262)
                      .|++||||.|+|+++++++|+++|+++..+|..
T Consensus        82 ~Gv~HIAf~vdDI~~~~~~L~~~Gv~~l~~P~~  114 (191)
T cd07250          82 AGVQHIALATDDIFATVAALRARGVEFLPIPDN  114 (191)
T ss_pred             CceeEEEEECCCHHHHHHHHHHcCCeeccCchh
Confidence            899999999999999999999999999876643

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=99.30  E-value=5.1e-11  Score=78.90  Aligned_cols=116  Identities=27%  Similarity=0.313  Sum_probs=76.1

Q ss_pred             ceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCC--CCC--CCCCcee--EEE
Q 024779            2 LHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD--KYD--IGTGFGH--FGI   75 (262)
Q Consensus         2 ~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~--~~~~~~~--i~~   75 (262)
                      =|++|.|+|++++++||.++||++.-.+.+        .|+.++-..+.++.-+.......  ..-  .+.-..|  +.+
T Consensus         6 FHLA~pV~Dl~~tr~FYgevlG~~~GRstd--------~wvdfDfyGHQ~v~Hl~~q~~~~~~g~V~~~~v~~pHfGvVl   77 (138)
T COG3565           6 FHLAIPVNDLDETRRFYGEVLGCKEGRSTD--------TWVDFDFYGHQVVAHLTPQPDSQGSGKVDGHGVPPPHFGVVL   77 (138)
T ss_pred             eEEeeeccccHHHHhhhhhhcccccccccc--------eEEEeeecccEEEEEecCCcccccCcccCCCCCCCccceEEE
Confidence            389999999999999999999998643322        23333322233333332211100  000  1112233  566


Q ss_pred             EeCCHHHHHHHHHHcCCeeecCCccc---CCCCeEEEEEECCCCCEEEEEEcC
Q 024779           76 AVDDVAKTVELIKAKGGKVTREPGPV---KGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        76 ~v~d~~~~~~~l~~~G~~~~~~~~~~---~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                      .++|--++.++|+++|+....+|.-.   ..|..+.+++.||.||.+|+-...
T Consensus        78 ~~edW~alaerlea~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEfK~fR  130 (138)
T COG3565          78 PVEDWFALAERLEAAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEFKGFR  130 (138)
T ss_pred             EHHHHHHHHHHHHHcCCCcccCceEEecCCccceEEEEEECCCCCeeeeeccc
Confidence            77788999999999999887777533   235678899999999999987543

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=99.29  E-value=4.2e-10  Score=79.35  Aligned_cols=118  Identities=19%  Similarity=0.162  Sum_probs=88.4

Q ss_pred             EEEEeC-CHHHHHHHHHhhcCcEEEEEecCCC----------CcceeeEeeecCCCceeEEEeeecCCCCCCCCCC-Cce
Q 024779            4 VVYRVG-DLDRTIKFYTECLGMKLLRKRDIPE----------EKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGT-GFG   71 (262)
Q Consensus         4 v~l~v~-d~~~a~~fY~~~lG~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~   71 (262)
                      .-|..+ |.++|++||+++||.++..+....+          +...++.+.++..    .+.+....+......+. .-.
T Consensus         4 PYl~f~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~g~----~im~sd~~~~~~~~~~~~~s~   79 (136)
T COG2764           4 PYLFFNGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIGGS----TIMLSDAFPDMGATEGGGTSL   79 (136)
T ss_pred             eEEEECCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEECCE----EEEEecCCCccCcccCCCeeE
Confidence            357788 9999999999999999988765555          5667777777743    23333322222222323 234


Q ss_pred             eEEEEeCCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCC
Q 024779           72 HFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  126 (262)
Q Consensus        72 ~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~  126 (262)
                      .|.+.++|++++.+++.+.|+++..++....+ +.+...+.||.|+.|.|.....
T Consensus        80 ~l~~~~~d~da~f~~a~~aGa~v~mpl~~~fw-G~r~G~v~D~fGv~W~l~~~~~  133 (136)
T COG2764          80 SLDLYVEDVDAVFERAAAAGATVVMPLEDTFW-GDRYGQVTDPFGVVWMLNTPVE  133 (136)
T ss_pred             EEEEEehHHHHHHHHHHhcCCeEEecchhcCc-ccceEEEECCCCCEEEEecCcc
Confidence            58888899999999999999999999888887 5677789999999999986543

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=99.28  E-value=5.6e-11  Score=78.72  Aligned_cols=117  Identities=21%  Similarity=0.223  Sum_probs=75.3

Q ss_pred             CceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCc---c-cccCCceeEE--
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVT---D-YDKGNAYAQI--  203 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~-~~~~~~~~~i--  203 (262)
                      .+-|+++.|.|++++++||.++||++..++.+      .+.-+..=  +-+.+..+.......   . ...+-..-|+  
T Consensus         4 ~~FHLA~pV~Dl~~tr~FYgevlG~~~GRstd------~wvdfDfy--GHQ~v~Hl~~q~~~~~~g~V~~~~v~~pHfGv   75 (138)
T COG3565           4 VPFHLAIPVNDLDETRRFYGEVLGCKEGRSTD------TWVDFDFY--GHQVVAHLTPQPDSQGSGKVDGHGVPPPHFGV   75 (138)
T ss_pred             cceEEeeeccccHHHHhhhhhhcccccccccc------eEEEeeec--ccEEEEEecCCcccccCcccCCCCCCCccceE
Confidence            35699999999999999999999999876543      11111110  012222222111000   0 1111123344  


Q ss_pred             EEEecCHHHHHHHHHHhCCeeecCCccC---CCCcceEEEEeCCCCcEEEEEec
Q 024779          204 AIGTDDVYKTAEAIKLFGGKVTREPGPL---PGINTKITACLDPDGWKTVFVDN  254 (262)
Q Consensus       204 ~~~v~dl~~~~~~l~~~g~~~~~~~~~~---~~~~~~~~~~~DP~G~~ie~~~~  254 (262)
                      -|.++|--++.+||+++|+.+..+|.-.   ..|..+.+++.||+||.+|+-.-
T Consensus        76 Vl~~edW~alaerlea~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEfK~f  129 (138)
T COG3565          76 VLPVEDWFALAERLEAAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEFKGF  129 (138)
T ss_pred             EEEHHHHHHHHHHHHHcCCCcccCceEEecCCccceEEEEEECCCCCeeeeecc
Confidence            3557888999999999999999888443   22446889999999999998543

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=99.25  E-value=2.3e-10  Score=81.55  Aligned_cols=112  Identities=17%  Similarity=0.058  Sum_probs=74.8

Q ss_pred             EEeee-cChhhhHHHHHHhcCCeeeeeccCcC----------ccceeeeeccCCCCcceEEEEeeecCCcccccCCceeE
Q 024779          134 VMLRV-GDLDRSINFYEQAFGMELLRKRDNPE----------YKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQ  202 (262)
Q Consensus       134 v~l~v-~d~~~~~~FY~~~lG~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  202 (262)
                      ..|.+ .|.+++++||+++||+++......+.          +......+..+    +..+.+....+.... .......
T Consensus         3 p~L~~~~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~----g~~l~~~d~~~~~~~-~~~~~~~   77 (128)
T cd06588           3 PYLWFNGNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIG----GQRLMASDGGPGFPF-TFGNGIS   77 (128)
T ss_pred             eEEeeCCCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEEC----CEEEEEEcCCCCCCC-CCCCCEE
Confidence            34667 89999999999999999987653211          11122233322    234444432222111 1334567


Q ss_pred             EEEEecC---HHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEE
Q 024779          203 IAIGTDD---VYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFV  252 (262)
Q Consensus       203 i~~~v~d---l~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~  252 (262)
                      +++.|+|   +++++++|.+.| +++.++...++|. +.++++||+|+.|+|.
T Consensus        78 l~i~~~~~e~v~~~~~~l~~~g-~~~~~~~~~~~g~-~~~~v~Dp~G~~W~i~  128 (128)
T cd06588          78 LSVECDSEEEADRLFEALSEGG-TVLMPLQKTFWSP-LFGWVTDRFGVSWQIN  128 (128)
T ss_pred             EEEECCCHHHHHHHHHHHhcCC-eEeccchhcCccc-ccEEEECCCCCEEEeC
Confidence            8888875   778889987765 8888888888864 7899999999999973

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=99.21  E-value=7.9e-10  Score=78.00  Aligned_cols=118  Identities=17%  Similarity=0.173  Sum_probs=85.6

Q ss_pred             EEeeec-ChhhhHHHHHHhcCCeeeeeccCcC----------ccceeeeeccCCCCcceEEEEeeecCCccccc-CCcee
Q 024779          134 VMLRVG-DLDRSINFYEQAFGMELLRKRDNPE----------YKYTIAMMGYGPEDKNVVLELTYNYGVTDYDK-GNAYA  201 (262)
Q Consensus       134 v~l~v~-d~~~~~~FY~~~lG~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~  201 (262)
                      -.|..+ |.+++.+||+++||.++..+....+          +....+.+..+    ...+-+....+...... ++...
T Consensus         4 PYl~f~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~----g~~im~sd~~~~~~~~~~~~~s~   79 (136)
T COG2764           4 PYLFFNGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIG----GSTIMLSDAFPDMGATEGGGTSL   79 (136)
T ss_pred             eEEEECCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEEC----CEEEEEecCCCccCcccCCCeeE
Confidence            356778 9999999999999999988766554          22223333322    23333333332222222 33456


Q ss_pred             EEEEEecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          202 QIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       202 ~i~~~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                      .|.+.++|+++..+++.+.|+++..++.+..+|. ++..++||.|+.|-|...+.
T Consensus        80 ~l~~~~~d~da~f~~a~~aGa~v~mpl~~~fwG~-r~G~v~D~fGv~W~l~~~~~  133 (136)
T COG2764          80 SLDLYVEDVDAVFERAAAAGATVVMPLEDTFWGD-RYGQVTDPFGVVWMLNTPVE  133 (136)
T ss_pred             EEEEEehHHHHHHHHHHhcCCeEEecchhcCccc-ceEEEECCCCCEEEEecCcc
Confidence            6777788999999999999999999999999975 89999999999999987664

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=99.21  E-value=1.7e-10  Score=86.74  Aligned_cols=147  Identities=22%  Similarity=0.310  Sum_probs=84.9

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCC--CC---CC-------CCCC
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG--VD---KY-------DIGT   68 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~---~~-------~~~~   68 (262)
                      |+||.+.|+|++++.++|++.|||++......+..+..+..+.+++.    +||+....+  ..   ..       ..+.
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~~~----YlEli~i~~~~~~~~~~~~~~~~~~~~~~   76 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFGDG----YLELIAIDPEAPAPDRGRWFGLDRLAGGE   76 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-SSS----EEEEEEES-HHHSTGGGT-TTTHHHHT--
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeCCc----eEEEEEeCCcccccccccceechhhcCCC
Confidence            68999999999999999988899999988777766777888888654    566654221  11   11       1467


Q ss_pred             CceeEEEEeCCHHHHHHHHHHcCCeeecCCcccCCCC--eEEEEEECC----CCCEEEEEEcC-CC---------CCCce
Q 024779           69 GFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGN--TVIAFIEDP----DGYKFELLERG-PT---------PEPLC  132 (262)
Q Consensus        69 ~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~--~~~~~~~DP----~G~~iel~~~~-~~---------~~~~~  132 (262)
                      |+..+|+.++|+++..+++.+.|+..... ...+.+.  -+.+++.++    .+..-.+++.. +.         ..+|.
T Consensus        77 g~~~~~l~t~d~~~~~~~l~~~G~~~~~r-~~~dG~~~~w~~~~~~~~~~p~~~~~Pf~i~~~~~~~~~~~h~ng~~~i~  155 (175)
T PF13468_consen   77 GLYGWALRTDDIEAVAARLRAAGLDAGSR-VRPDGGDLRWRLAFPEDGALPFGGLLPFFIQWETPHPEWARHPNGALGIT  155 (175)
T ss_dssp             EEEEEEEE-S-HHHHHHHHHTTT-EEEEE-EEEEE-EEEEEEEEEE-SS---SS---EEEEESS-CCHHTTT--TTEEEE
T ss_pred             CeEEEEEecCCHHHHHHHHHhcCCCCCCc-CcCCCCcceEEEEEeCCcccccCCCCcEEEEeCCCCcccccCCCccceEE
Confidence            89999999999999999999999752211 1111111  133334443    23444555332 22         23789


Q ss_pred             eEEeeecChhhhHHHHHHhc
Q 024779          133 QVMLRVGDLDRSINFYEQAF  152 (262)
Q Consensus       133 ~v~l~v~d~~~~~~FY~~~l  152 (262)
                      +|.+.++|++++.++|.++|
T Consensus       156 ~v~i~~~d~~~~~~~~~~l~  175 (175)
T PF13468_consen  156 RVVIAVPDPDAAAARYARLL  175 (175)
T ss_dssp             EEEEEETTHHHHHHHHHHH-
T ss_pred             EEEEEeCCHHHHHHHHHhhC
Confidence            99999999999999999875

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=99.20  E-value=2.4e-10  Score=77.16  Aligned_cols=113  Identities=21%  Similarity=0.220  Sum_probs=77.4

Q ss_pred             ceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCc-------ccccCCceeEE
Q 024779          131 LCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVT-------DYDKGNAYAQI  203 (262)
Q Consensus       131 ~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~~~~~~~~~~i  203 (262)
                      ...|+|.|+|++++.+||+. |||+.........   ..+++-.    ....+-|.....-.       .....+.-..|
T Consensus         4 mIFvNLPVkDL~~S~~Fy~a-lGfk~Npq~sde~---a~~mi~~----~ni~vMLL~~~~fq~F~~~~i~dt~~s~evli   75 (133)
T COG3607           4 MIFVNLPVKDLEASKAFYTA-LGFKFNPQFSDED---AACMIIS----DNIFVMLLEEARFQTFTKRQIADTTKSREVLI   75 (133)
T ss_pred             EEEEecchhhHHHHHHHHHH-hCcccCCCccccc---ceeEEEe----ccEEEEEeccHHhhhhcccccccccCCceEEE
Confidence            45789999999999999976 9999876544332   1122211    12223333211100       12234566788


Q ss_pred             EEEec---CHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEe
Q 024779          204 AIGTD---DVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVD  253 (262)
Q Consensus       204 ~~~v~---dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~  253 (262)
                      +|.+.   ++++++++..++|++...+|.+...  .+..-+.|||||.||++-
T Consensus        76 ~ls~~s~eevd~~v~ka~eaGGk~~~~~~d~gf--MYg~~fqDpDGh~wE~l~  126 (133)
T COG3607          76 SLSAGSREEVDELVDKALEAGGKPANEPQDEGF--MYGRSFQDPDGHVWEFLW  126 (133)
T ss_pred             EeccCcHHHHHHHHHHHHHcCCCCCCCcccccc--ccceeeeCCCCCeEEEEE
Confidence            88875   7899999999999999887766655  567789999999999974

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=99.18  E-value=1.8e-09  Score=76.92  Aligned_cols=111  Identities=14%  Similarity=0.175  Sum_probs=74.2

Q ss_pred             EEEEe-CCHHHHHHHHHhhcCcEEEEEecC----------CCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCcee
Q 024779            4 VVYRV-GDLDRTIKFYTECLGMKLLRKRDI----------PEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGH   72 (262)
Q Consensus         4 v~l~v-~d~~~a~~fY~~~lG~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   72 (262)
                      ..|.+ .|.++|++||+++||+++......          ..+....+.+.+++.    .+.+......... .+..-.+
T Consensus         3 p~L~~~~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~----~l~~~d~~~~~~~-~~~~~~~   77 (128)
T cd06588           3 PYLWFNGNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIGGQ----RLMASDGGPGFPF-TFGNGIS   77 (128)
T ss_pred             eEEeeCCCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEECCE----EEEEEcCCCCCCC-CCCCCEE
Confidence            35677 999999999999999999876531          123344556665542    2333322111111 1223346


Q ss_pred             EEEEeCC---HHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEE
Q 024779           73 FGIAVDD---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL  121 (262)
Q Consensus        73 i~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel  121 (262)
                      +++.|+|   +++++++|.+.| ++..++...++ +.+...+.||+|+.|+|
T Consensus        78 l~i~~~~~e~v~~~~~~l~~~g-~~~~~~~~~~~-g~~~~~v~Dp~G~~W~i  127 (128)
T cd06588          78 LSVECDSEEEADRLFEALSEGG-TVLMPLQKTFW-SPLFGWVTDRFGVSWQI  127 (128)
T ss_pred             EEEECCCHHHHHHHHHHHhcCC-eEeccchhcCc-ccccEEEECCCCCEEEe
Confidence            8999886   667888876655 88778777766 56778899999999987

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.16  E-value=1.2e-09  Score=91.20  Aligned_cols=123  Identities=20%  Similarity=0.229  Sum_probs=87.5

Q ss_pred             CceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcc------cccCCceeEE
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD------YDKGNAYAQI  203 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~------~~~~~~~~~i  203 (262)
                      +++|+.+.|+|++++.+||.+.|||+........... ....+..    +...+.|........      ..+++++.|+
T Consensus         2 ~i~hi~~~V~D~~~a~~~y~~~LGf~~~~~~~~~~~~-~~~~~~~----G~~~l~L~~~~~~~s~~~~~~~~hg~gv~~i   76 (353)
T TIGR01263         2 GFDFVEFYVGDAKQAAYYYFTRFGFEKVAKETGHREK-ASHVLRQ----GQINFVLTAPYSSDSPAADFAAKHGDGVKDV   76 (353)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCcEEEEeecCCce-eEEEEEe----CCEEEEEecCCCCCchHHHHHHhCCCceEEE
Confidence            5799999999999999999999999998763222221 2222321    345677765432221      1357899999


Q ss_pred             EEEecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecccc
Q 024779          204 AIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDF  257 (262)
Q Consensus       204 ~~~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~  257 (262)
                      +|.|+|+++++++++++|++++.+|.....+..++..+.-+.|..+-|+++..+
T Consensus        77 af~V~Dv~~a~~~l~~~Ga~~v~~p~~~~~g~~~~~~i~~~g~~~~~~i~~~~~  130 (353)
T TIGR01263        77 AFRVDDAAAAFEAAVERGAEPVQAPVELDEGAVTLATIKGIGDVVHTLVDRGGY  130 (353)
T ss_pred             EEEECCHHHHHHHHHHCCCEeccCCccCCCCeEEEEEEECcCCCEEEEEcCCCC
Confidence            999999999999999999999988765411223455567788888888876543

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=99.01  E-value=1.3e-09  Score=77.52  Aligned_cols=121  Identities=19%  Similarity=0.195  Sum_probs=74.2

Q ss_pred             CceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccc---eeeeeccCCCCcceEEEE--------eeecCCccccc-C
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKY---TIAMMGYGPEDKNVVLEL--------TYNYGVTDYDK-G  197 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l--------~~~~~~~~~~~-~  197 (262)
                      ++.|+.+.|+|++++.+||+++|||++...........   ...+..............        ........... .
T Consensus         2 ~l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (138)
T COG0346           2 GIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEGRAGTGFVGDVALGVPGG   81 (138)
T ss_pred             ceEEEEEeeCCHhHhHHHHHhhcCCeeeeecccccCCceEEEEEeccCCCCcccceeecccccccccccccceEEeecCc
Confidence            57899999999999999999999999987654332211   111111100000000000        00000000011 1


Q ss_pred             -CceeEEEEEecC---HHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEe
Q 024779          198 -NAYAQIAIGTDD---VYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVD  253 (262)
Q Consensus       198 -~~~~~i~~~v~d---l~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~  253 (262)
                       .+..|+++.+++   ...........|..+...+. ..+  +..+|++||||+.||+.+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~--~~~~~~~dp~g~~~e~~~  138 (138)
T COG0346          82 DLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEP-GRG--GVHVYFRDPDGILIELAT  138 (138)
T ss_pred             hhccCceeEecccccccceEEEeeCCCCCEEEeecC-CCc--ceEEEEECCCCcEEEeeC
Confidence             347899999998   66777788888888766544 333  238999999999999974

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=98.96  E-value=7e-09  Score=70.18  Aligned_cols=114  Identities=25%  Similarity=0.282  Sum_probs=70.8

Q ss_pred             eEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCC---CCC----CCCCceeEEE
Q 024779            3 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD---KYD----IGTGFGHFGI   75 (262)
Q Consensus         3 hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~----~~~~~~~i~~   75 (262)
                      .|+|.|+|++++++||+. |||+.-...  .+..  .+.+-+++ +.  ...|.....-.   ...    ....-.-|++
T Consensus         6 FvNLPVkDL~~S~~Fy~a-lGfk~Npq~--sde~--a~~mi~~~-ni--~vMLL~~~~fq~F~~~~i~dt~~s~evli~l   77 (133)
T COG3607           6 FVNLPVKDLEASKAFYTA-LGFKFNPQF--SDED--AACMIISD-NI--FVMLLEEARFQTFTKRQIADTTKSREVLISL   77 (133)
T ss_pred             EEecchhhHHHHHHHHHH-hCcccCCCc--cccc--ceeEEEec-cE--EEEEeccHHhhhhcccccccccCCceEEEEe
Confidence            578899999999999987 999876542  2222  22222222 11  22222211100   000    1112223788


Q ss_pred             EeCC---HHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCC
Q 024779           76 AVDD---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  126 (262)
Q Consensus        76 ~v~d---~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~  126 (262)
                      .+.+   ++++.++..++|.++..++.+..  .-+..-|.|||||.||++.-.+
T Consensus        78 s~~s~eevd~~v~ka~eaGGk~~~~~~d~g--fMYg~~fqDpDGh~wE~l~m~~  129 (133)
T COG3607          78 SAGSREEVDELVDKALEAGGKPANEPQDEG--FMYGRSFQDPDGHVWEFLWMDP  129 (133)
T ss_pred             ccCcHHHHHHHHHHHHHcCCCCCCCccccc--cccceeeeCCCCCeEEEEEeCH
Confidence            8774   78899999999999987766554  4455667999999999986543

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=98.96  E-value=8e-08  Score=64.80  Aligned_cols=114  Identities=26%  Similarity=0.362  Sum_probs=68.1

Q ss_pred             ceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCHH
Q 024779            2 LHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVA   81 (262)
Q Consensus         2 ~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~~   81 (262)
                      -+-+|.|+|.+...+||++.|||++..++.      ..++++.......++++-.+...........-++.+.+.|++..
T Consensus         2 ~~PvlRVnnR~~ni~FY~~~LGfkll~EEn------a~a~lg~~~~~erlvlEESP~~rtr~V~G~KKl~~ivIkv~~~~   75 (125)
T PF14506_consen    2 IIPVLRVNNRDLNIDFYQKTLGFKLLSEEN------ALAILGDQQKEERLVLEESPSMRTRAVEGPKKLNRIVIKVPNPK   75 (125)
T ss_dssp             EEEEEEESSHHHHHHHHTTTT--EEEEEET------TEEEEE-TT--EEEEEEE--TTT-B--SSS-SEEEEEEEESSHH
T ss_pred             cCceEEEcCHHHhHHHHHhccCcEEeeccc------cEEEecCCCCceEEEEecCCccccccccCcceeeEEEEEcCCHH
Confidence            467899999999999999999999998876      56777665555667666654322223334457889999999866


Q ss_pred             HHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcC
Q 024779           82 KTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        82 ~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                      ++ +.|.++|.++..   -..+..++.+...+|+|..|.++...
T Consensus        76 EI-e~LLar~~~~~~---l~kg~~gyAfe~vSPEgd~~llhaEd  115 (125)
T PF14506_consen   76 EI-EALLARGAQYDR---LYKGKNGYAFEAVSPEGDRFLLHAED  115 (125)
T ss_dssp             HH-HHHHHC-S--SE---EEE-SSSEEEEEE-TT--EEEEE--S
T ss_pred             HH-HHHHhcccccce---eEEcCCceEEEEECCCCCEEEEEEcC
Confidence            64 445566655421   12222556677789999999888543

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=98.95  E-value=2.3e-09  Score=76.31  Aligned_cols=119  Identities=25%  Similarity=0.427  Sum_probs=70.7

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcc-eeeEeeecCC--CceeEEEee------ecCCCCC---CCCC-
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKY-TNAFLGYGPE--DSHFVIELT------YNYGVDK---YDIG-   67 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~l~~~------~~~~~~~---~~~~-   67 (262)
                      ++||+|.|+|+++|++||+++||+++........... ....+.....  .........      .......   ...+ 
T Consensus         3 l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (138)
T COG0346           3 IHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEGRAGTGFVGDVALGVPGGD   82 (138)
T ss_pred             eEEEEEeeCCHhHhHHHHHhhcCCeeeeecccccCCceEEEEEeccCCCCcccceeecccccccccccccceEEeecCch
Confidence            5899999999999999999999999988654222111 0111111110  000000000      0000000   0011 


Q ss_pred             CCceeEEEEeCC---HHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEE
Q 024779           68 TGFGHFGIAVDD---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  122 (262)
Q Consensus        68 ~~~~~i~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~  122 (262)
                      .+..|+++.+++   ...........|..+..... ... + ..+|+.||||+.+|+.
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~-~-~~~~~~dp~g~~~e~~  137 (138)
T COG0346          83 LGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEP-GRG-G-VHVYFRDPDGILIELA  137 (138)
T ss_pred             hccCceeEecccccccceEEEeeCCCCCEEEeecC-CCc-c-eEEEEECCCCcEEEee
Confidence            346789999998   66677777778887654333 222 2 2799999999999986

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.94  E-value=6.1e-09  Score=86.76  Aligned_cols=96  Identities=17%  Similarity=0.233  Sum_probs=69.7

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCC-----cceeeEeeecCCCceeEEEeeecCCC--C--------CCC
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEE-----KYTNAFLGYGPEDSHFVIELTYNYGV--D--------KYD   65 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~--~--------~~~   65 (262)
                      |+||++.|++++.+..||+++|||+..+....++.     ......+..++  ....+++..+...  .        ...
T Consensus       181 IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp~--g~v~ipLnEP~~~~~~~SqI~eFL~~~  258 (398)
T PLN02875        181 LDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASNN--EMVLLPLNEPTFGTKRKSQIQTYLEHN  258 (398)
T ss_pred             eCcceechhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEEcCC--CcEEEEeccCCCCCCCcChHHHHHHhc
Confidence            68999999999999999999999998876543221     12344444333  2345666654221  1        122


Q ss_pred             CCCCceeEEEEeCCHHHHHHHHHHc----CCeeecCC
Q 024779           66 IGTGFGHFGIAVDDVAKTVELIKAK----GGKVTREP   98 (262)
Q Consensus        66 ~~~~~~~i~~~v~d~~~~~~~l~~~----G~~~~~~~   98 (262)
                      .|.|++||||.|+|+.++.++|+++    |++.+..|
T Consensus       259 ~G~GIQHIAl~tdDI~~av~~Lra~~~~~Gv~fL~~P  295 (398)
T PLN02875        259 EGPGLQHLALKSDDIFGTLREMRARSHIGGFEFMPPP  295 (398)
T ss_pred             CCCCeeEEEeecCCHHHHHHHHHhccccCCeecCCCC
Confidence            5689999999999999999999999    99887644

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=98.83  E-value=1e-08  Score=80.34  Aligned_cols=130  Identities=15%  Similarity=0.184  Sum_probs=94.8

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcc-------cccCCcee
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD-------YDKGNAYA  201 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-------~~~~~~~~  201 (262)
                      .+++||.+.|.|...+++||+..|||+.........+...+.......+  .....+...+.+..       ..+|.++.
T Consensus        16 l~f~Hi~F~vgna~q~A~~y~~~fGfep~A~~~letg~~~~~s~alr~g--~~vFv~~s~~~p~~~~~G~~l~~Hgdgvk   93 (381)
T KOG0638|consen   16 LRFHHIEFWVGNAKQAARWYCSGFGFEPLAYRGLETGSREWASHALRQG--KIVFVFNSAYNPDNSEYGDHLVKHGDGVK   93 (381)
T ss_pred             eeeeEEEEEecCcHHHHHHHHhhcCCcchhcccccccchHHHHHHhhcC--CEEEEEecCCCCCchhhhhhhhhcccchh
Confidence            3799999999999999999999999999876554444344344443321  23333333222221       34567899


Q ss_pred             EEEEEecCHHHHHHHHHHhCCeeecCCccCCC--CcceEEEEeCCCCcEEEEEeccccccc
Q 024779          202 QIAIGTDDVYKTAEAIKLFGGKVTREPGPLPG--INTKITACLDPDGWKTVFVDNVDFLKE  260 (262)
Q Consensus       202 ~i~~~v~dl~~~~~~l~~~g~~~~~~~~~~~~--~~~~~~~~~DP~G~~ie~~~~~~~~~~  260 (262)
                      -+||+|+|++++.+.+.++|.++..+|.....  |..+++.++.+.-....+++++.+.++
T Consensus        94 dvafeVeD~da~~~~~va~Ga~v~~~p~~~~da~G~v~~A~l~tygd~thtlvEr~~y~g~  154 (381)
T KOG0638|consen   94 DVAFEVEDADAIFQEAVANGAKVVRPPWEESDAQGAVTYAVLKTYGDTTHTLVERKGYKGP  154 (381)
T ss_pred             ceEEEecchHHHHHHHHHcCCcccCCcceeeccCCcEEEEEEecccchhhhhhhhcccccc
Confidence            99999999999999999999999999876654  344778888888777788887776553

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=98.80  E-value=4e-08  Score=79.27  Aligned_cols=104  Identities=22%  Similarity=0.350  Sum_probs=71.5

Q ss_pred             CceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEec-
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTD-  208 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~-  208 (262)
                      ...||+|.|+|++++++||+++|++.. .  ..+.   ..++ +    +....+-+...     ......-..++|.++ 
T Consensus       247 ~~IfVNLpV~DL~rS~~FYt~LF~~n~-F--sde~---a~cm-~----dtI~vMllt~~-----D~~~~~evLl~Ls~~S  310 (357)
T PRK01037        247 KTFSVVLEVQDLRRAKKFYSKMFGLEC-W--DGDK---LFLL-G----KTSLYLQQTKA-----EKKNRGTTTLSLELEC  310 (357)
T ss_pred             ceEEEEeeeCCHHHHHHHHHHHhCCCC-C--CCCc---cccc-c----CcEEEEEecCC-----CCCCcceEEEEeccCC
Confidence            567999999999999999999988874 2  1111   1122 1    22222222221     122345567888875 


Q ss_pred             --CHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEe
Q 024779          209 --DVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVD  253 (262)
Q Consensus       209 --dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~  253 (262)
                        ++++++++..++|++...+|.++..    .--|.|||||.||++=
T Consensus       311 re~VD~lv~~A~aaGG~~~~~~~D~Gf----~rsf~D~DGH~WEi~~  353 (357)
T PRK01037        311 EHDFVRFLRRWEMLGGELGEQADGHFP----LRLVFDLDGHIWVVSC  353 (357)
T ss_pred             HHHHHHHHHHHHHcCCCCCCCcccccC----cceeECCCCCEEEEEE
Confidence              6899999999999988766666555    3458999999999974

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=98.79  E-value=5.7e-08  Score=78.39  Aligned_cols=103  Identities=20%  Similarity=0.275  Sum_probs=66.2

Q ss_pred             ceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCC--
Q 024779            2 LHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD--   79 (262)
Q Consensus         2 ~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d--   79 (262)
                      -||+|.|+|+++|++||+++|++.. .+.+    .  .+.+  ++   .....+....  ...  ...-.-+|+.+++  
T Consensus       249 IfVNLpV~DL~rS~~FYt~LF~~n~-Fsde----~--a~cm--~d---tI~vMllt~~--D~~--~~~evLl~Ls~~Sre  312 (357)
T PRK01037        249 FSVVLEVQDLRRAKKFYSKMFGLEC-WDGD----K--LFLL--GK---TSLYLQQTKA--EKK--NRGTTTLSLELECEH  312 (357)
T ss_pred             EEEEeeeCCHHHHHHHHHHHhCCCC-CCCC----c--cccc--cC---cEEEEEecCC--CCC--CcceEEEEeccCCHH
Confidence            3899999999999999999988875 3222    1  1222  22   1122222111  111  1222348888885  


Q ss_pred             -HHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEc
Q 024779           80 -VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  124 (262)
Q Consensus        80 -~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  124 (262)
                       ++++.++..++|.+...++.+.  |.  .--|.|||||.||++-.
T Consensus       313 ~VD~lv~~A~aaGG~~~~~~~D~--Gf--~rsf~D~DGH~WEi~~~  354 (357)
T PRK01037        313 DFVRFLRRWEMLGGELGEQADGH--FP--LRLVFDLDGHIWVVSCV  354 (357)
T ss_pred             HHHHHHHHHHHcCCCCCCCcccc--cC--cceeECCCCCEEEEEEE
Confidence             7889999999999765554443  33  33369999999999853

>PRK10148 hypothetical protein; Provisional

Probab=98.67  E-value=3.6e-06  Score=61.16  Aligned_cols=116  Identities=16%  Similarity=0.124  Sum_probs=76.0

Q ss_pred             EEEeC-CHHHHHHHHHhhcCcEEEEEec---C-----------------CCCcceeeEeeecCCCceeEEEeeecCCCCC
Q 024779            5 VYRVG-DLDRTIKFYTECLGMKLLRKRD---I-----------------PEEKYTNAFLGYGPEDSHFVIELTYNYGVDK   63 (262)
Q Consensus         5 ~l~v~-d~~~a~~fY~~~lG~~~~~~~~---~-----------------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~   63 (262)
                      -|..+ |.++|.+||+++||.++.....   .                 ..+...++.+.+++.    .+.+..... ..
T Consensus         6 yL~f~g~a~eAi~FY~~~Fgae~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Ha~l~i~g~----~lm~sD~~~-~~   80 (147)
T PRK10148          6 YLSFAGNCADAIAYYQQTLGAELLYKISFGEMPKSAQDSEEGCPSGMQFPDTAIAHANVRIAGS----DIMMSDAIP-SG   80 (147)
T ss_pred             EEEeCCCHHHHHHHHHHHhCCEEEEEEEcccCCccccccccCCCccccCcCCcEEEEEEEECCE----EEEEECCCC-Cc
Confidence            45664 8999999999999988765421   0                 123455666766542    223322111 11


Q ss_pred             CCCCCCceeEEEEeCCHHH---HHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCCCC
Q 024779           64 YDIGTGFGHFGIAVDDVAK---TVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTP  128 (262)
Q Consensus        64 ~~~~~~~~~i~~~v~d~~~---~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~~~  128 (262)
                      ...+ .-.++++.++|.++   +.++| +.|.++..++.+..+ +.+...+.||.|+.|.|......|
T Consensus        81 ~~~~-~~~~l~l~~~d~ee~~~~~~aL-a~gg~v~mpl~~~~w-g~~~g~v~D~fGi~W~l~~~~~~~  145 (147)
T PRK10148         81 KAHY-SGFTLVLDTQDVEEGKRWFDNL-AANGKIEMAWQETFW-AHGFGKVTDKFGVPWMINVVKQQP  145 (147)
T ss_pred             CCCC-CeEEEEEECCCHHHHHHHHHHh-hCCCEEEecchhcch-hhccEEEECCCCCEEEEEecCCCC
Confidence            1112 23457888888776   44554 689999989888877 556678999999999998765544

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=98.54  E-value=2.3e-07  Score=74.33  Aligned_cols=100  Identities=21%  Similarity=0.278  Sum_probs=70.5

Q ss_pred             CceEEEEe--CCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCC-------CCCCCCce
Q 024779            1 MLHVVYRV--GDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDK-------YDIGTGFG   71 (262)
Q Consensus         1 l~hv~l~v--~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-------~~~~~~~~   71 (262)
                      |+|++..|  ..++.+..||+++|+|+.....+.++......--.+-.....+.+.+..+.....       ...|.|++
T Consensus       168 IDHl~~nv~~~~md~w~~FY~~if~~~~~~~fdi~~p~tgl~Sram~Sp~G~vrlplN~s~~~~sqi~efl~~y~G~GIQ  247 (363)
T COG3185         168 IDHLTHNVKAGQMDTWVLFYESLFGFREIQYFDIPGPITGLRSRAMVSPCGKVRLPLNESADDKSQIGEFLREYRGEGIQ  247 (363)
T ss_pred             echhhhhcchhhHHHHHHHHHHHhCccceeeEeccCCcccEEEeeEecCCCcEEeecccCCCchhHHHHHHHHhCCCcce
Confidence            57888877  5899999999999999998887765542222111111223335555554322211       22678999


Q ss_pred             eEEEEeCCHHHHHHHHHHcCCeeecCCcc
Q 024779           72 HFGIAVDDVAKTVELIKAKGGKVTREPGP  100 (262)
Q Consensus        72 ~i~~~v~d~~~~~~~l~~~G~~~~~~~~~  100 (262)
                      ||+|.++|+-++.++++++|++.+..|..
T Consensus       248 HIA~~T~dI~~tv~~lr~rG~~fl~ip~t  276 (363)
T COG3185         248 HIAFGTDDIYATVAALRERGVKFLPIPET  276 (363)
T ss_pred             EEEecccHHHHHHHHHHHcCCccCCCchh
Confidence            99999999999999999999999866553

>PRK10148 hypothetical protein; Provisional

Probab=98.49  E-value=1e-05  Score=58.84  Aligned_cols=115  Identities=16%  Similarity=0.089  Sum_probs=72.8

Q ss_pred             EEeeec-ChhhhHHHHHHhcCCeeeeeccC---c-----------------CccceeeeeccCCCCcceEEEEeeecCCc
Q 024779          134 VMLRVG-DLDRSINFYEQAFGMELLRKRDN---P-----------------EYKYTIAMMGYGPEDKNVVLELTYNYGVT  192 (262)
Q Consensus       134 v~l~v~-d~~~~~~FY~~~lG~~~~~~~~~---~-----------------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  192 (262)
                      ..|... |.+++.+||+++||.++......   +                 ++....+.+..+    ...+-+....+. 
T Consensus         5 pyL~f~g~a~eAi~FY~~~Fgae~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Ha~l~i~----g~~lm~sD~~~~-   79 (147)
T PRK10148          5 PYLSFAGNCADAIAYYQQTLGAELLYKISFGEMPKSAQDSEEGCPSGMQFPDTAIAHANVRIA----GSDIMMSDAIPS-   79 (147)
T ss_pred             EEEEeCCCHHHHHHHHHHHhCCEEEEEEEcccCCccccccccCCCccccCcCCcEEEEEEEEC----CEEEEEECCCCC-
Confidence            345664 89999999999999887654321   1                 111112222221    123333221111 


Q ss_pred             ccccCCceeEEEEEecCHHH---HHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          193 DYDKGNAYAQIAIGTDDVYK---TAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       193 ~~~~~~~~~~i~~~v~dl~~---~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                       ........++.+.++|.++   +.++| +.|+++..++.+..++. ++..++||.|+.|.|...+.
T Consensus        80 -~~~~~~~~~l~l~~~d~ee~~~~~~aL-a~gg~v~mpl~~~~wg~-~~g~v~D~fGi~W~l~~~~~  143 (147)
T PRK10148         80 -GKAHYSGFTLVLDTQDVEEGKRWFDNL-AANGKIEMAWQETFWAH-GFGKVTDKFGVPWMINVVKQ  143 (147)
T ss_pred             -cCCCCCeEEEEEECCCHHHHHHHHHHh-hCCCEEEecchhcchhh-ccEEEECCCCCEEEEEecCC
Confidence             1111135677777778766   55666 68999999998888865 78899999999999977543

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=98.47  E-value=6.7e-07  Score=63.57  Aligned_cols=118  Identities=21%  Similarity=0.251  Sum_probs=74.5

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCC--CCCCCCceeEEEEeC
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDK--YDIGTGFGHFGIAVD   78 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~i~~~v~   78 (262)
                      ++||.+.+++.++...+++ .|||+.+.+-..    .....++-|  ...+.+.-.+.+....  ..+|.++..|+|+|+
T Consensus        10 ~dFvEFa~~~~~~l~~~~~-~lGF~~~a~hrs----k~v~l~rQG--~I~~vln~ep~s~a~~~~~~HG~sv~aiafrV~   82 (139)
T PF14696_consen   10 FDFVEFAVPDAQALAQLFT-ALGFQPVARHRS----KDVTLYRQG--DINFVLNSEPDSFAAEFAAQHGPSVCAIAFRVD   82 (139)
T ss_dssp             EEEEEEE-SSTTSCHHHHC-CCCEEEECCECC----CSEEEEEET--TEEEEEEEESTSCHHHHHHHHSSEEEEEEEEES
T ss_pred             eEEEEEecCCHHHHHHHHH-HhCcceEEecCC----cceEEEEeC--CEEEEEeCCCcchHHHHHHhcCCEEEEEEEEeC
Confidence            4789999999888888886 599999876421    123333333  3444443322111111  126889999999999


Q ss_pred             CHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCCC
Q 024779           79 DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  127 (262)
Q Consensus        79 d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~~  127 (262)
                      |.++++++..++|++...++...  +.....-+..++|.++-|++....
T Consensus        83 Da~~A~~rA~~~GA~~~~~~~~~--~e~~~paI~g~G~sl~yfVdr~~~  129 (139)
T PF14696_consen   83 DAAAAYERAVALGAEPVQEPTGP--GELNIPAIRGIGGSLHYFVDRYGD  129 (139)
T ss_dssp             -HHHHHHHHHHTT--EEEEEEET--T-BEEEEEE-CCC-EEEEEE--SS
T ss_pred             CHHHHHHHHHHcCCcCcccCCCC--CcEeeeeEEccCCCEEEEEecCCC
Confidence            99999999999999887665322  345667788999999999987544

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=98.46  E-value=8.3e-06  Score=55.21  Aligned_cols=112  Identities=24%  Similarity=0.349  Sum_probs=60.6

Q ss_pred             eEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcc-cccC-CceeEEEEEecCH
Q 024779          133 QVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD-YDKG-NAYAQIAIGTDDV  210 (262)
Q Consensus       133 ~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~-~~~~~i~~~v~dl  210 (262)
                      +-+|.|.|-+...+||+++|||++.....      .+++++..  .....+.|-+.+.... .-.| .-+.++-+.|.+.
T Consensus         3 ~PvlRVnnR~~ni~FY~~~LGfkll~EEn------a~a~lg~~--~~~erlvlEESP~~rtr~V~G~KKl~~ivIkv~~~   74 (125)
T PF14506_consen    3 IPVLRVNNRDLNIDFYQKTLGFKLLSEEN------ALAILGDQ--QKEERLVLEESPSMRTRAVEGPKKLNRIVIKVPNP   74 (125)
T ss_dssp             EEEEEESSHHHHHHHHTTTT--EEEEEET------TEEEEE-T--T--EEEEEEE--TTT-B--SSS-SEEEEEEEESSH
T ss_pred             CceEEEcCHHHhHHHHHhccCcEEeeccc------cEEEecCC--CCceEEEEecCCccccccccCcceeeEEEEEcCCH
Confidence            45789999999999999999999986532      44555543  2344444444333221 2233 4788999999874


Q ss_pred             HHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          211 YKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       211 ~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                      . .++.|.++|.++...-   .+-.++.+-..+|+|.+|.+....+
T Consensus        75 ~-EIe~LLar~~~~~~l~---kg~~gyAfe~vSPEgd~~llhaEdd  116 (125)
T PF14506_consen   75 K-EIEALLARGAQYDRLY---KGKNGYAFEAVSPEGDRFLLHAEDD  116 (125)
T ss_dssp             H-HHHHHHHC-S--SEEE---E-SSSEEEEEE-TT--EEEEE--S-
T ss_pred             H-HHHHHHhcccccceeE---EcCCceEEEEECCCCCEEEEEEcCC
Confidence            3 3455556665543211   1212466668899999999998766

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=98.43  E-value=6.2e-06  Score=58.66  Aligned_cols=118  Identities=18%  Similarity=0.195  Sum_probs=79.9

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcc----cccCCceeEEE
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD----YDKGNAYAQIA  204 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~i~  204 (262)
                      .++++|.+.+++..++..+++ .|||+...+....+   ...+ .    .+...+.|...+....    ..+|+++--++
T Consensus         8 ~G~dFvEFa~~~~~~l~~~~~-~lGF~~~a~hrsk~---v~l~-r----QG~I~~vln~ep~s~a~~~~~~HG~sv~aia   78 (139)
T PF14696_consen    8 DGFDFVEFAVPDAQALAQLFT-ALGFQPVARHRSKD---VTLY-R----QGDINFVLNSEPDSFAAEFAAQHGPSVCAIA   78 (139)
T ss_dssp             EEEEEEEEE-SSTTSCHHHHC-CCCEEEECCECCCS---EEEE-E----ETTEEEEEEEESTSCHHHHHHHHSSEEEEEE
T ss_pred             CCeEEEEEecCCHHHHHHHHH-HhCcceEEecCCcc---eEEE-E----eCCEEEEEeCCCcchHHHHHHhcCCEEEEEE
Confidence            468899999999888888885 69999987764332   1222 2    1345666655432211    33689999999


Q ss_pred             EEecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecccc
Q 024779          205 IGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDF  257 (262)
Q Consensus       205 ~~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~  257 (262)
                      |.|+|..+++++..+.|.+....|....  ...+.-++-+.|.++.|+++...
T Consensus        79 frV~Da~~A~~rA~~~GA~~~~~~~~~~--e~~~paI~g~G~sl~yfVdr~~~  129 (139)
T PF14696_consen   79 FRVDDAAAAYERAVALGAEPVQEPTGPG--ELNIPAIRGIGGSLHYFVDRYGD  129 (139)
T ss_dssp             EEES-HHHHHHHHHHTT--EEEEEEETT---BEEEEEE-CCC-EEEEEE--SS
T ss_pred             EEeCCHHHHHHHHHHcCCcCcccCCCCC--cEeeeeEEccCCCEEEEEecCCC
Confidence            9999999999999999999887763222  24677899999999999998654

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=98.19  E-value=7.3e-06  Score=61.61  Aligned_cols=89  Identities=24%  Similarity=0.341  Sum_probs=52.2

Q ss_pred             ceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCccc------------ccCC
Q 024779          131 LCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDY------------DKGN  198 (262)
Q Consensus       131 ~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------------~~~~  198 (262)
                      |+|+.+.|+|++++.++|++.|||++.....-+..+..-..+.++.   . .|||....+..+.            ..+.
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~~---~-YlEli~i~~~~~~~~~~~~~~~~~~~~~~   76 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFGD---G-YLELIAIDPEAPAPDRGRWFGLDRLAGGE   76 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-SS---S-EEEEEEES-HHHSTGGGT-TTTHHHHT--
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeCC---c-eEEEEEeCCcccccccccceechhhcCCC
Confidence            6899999999999999998899999987765554333334444432   3 6777763222111            1357


Q ss_pred             ceeEEEEEecCHHHHHHHHHHhCCe
Q 024779          199 AYAQIAIGTDDVYKTAEAIKLFGGK  223 (262)
Q Consensus       199 ~~~~i~~~v~dl~~~~~~l~~~g~~  223 (262)
                      |...++|.++|+++..++|+++|++
T Consensus        77 g~~~~~l~t~d~~~~~~~l~~~G~~  101 (175)
T PF13468_consen   77 GLYGWALRTDDIEAVAARLRAAGLD  101 (175)
T ss_dssp             EEEEEEEE-S-HHHHHHHHHTTT-E
T ss_pred             CeEEEEEecCCHHHHHHHHHhcCCC
Confidence            9999999999999999999999986

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=97.63  E-value=0.00026  Score=46.97  Aligned_cols=90  Identities=18%  Similarity=0.214  Sum_probs=43.7

Q ss_pred             ceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcc---cccCCceeEEEEEe
Q 024779          131 LCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD---YDKGNAYAQIAIGT  207 (262)
Q Consensus       131 ~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~i~~~v  207 (262)
                      +..+.|+|+| ++++.||+++||-...         ..              +.+.+..++.-   ....=++-.+-|.|
T Consensus         6 ~e~i~LNV~d-~~~~~fy~~~f~~~~~---------~~--------------l~f~ea~G~DL~~~~~~twDLe~Lkf~V   61 (101)
T PF14507_consen    6 FESIELNVPD-AKSQSFYQSIFGGQLP---------FF--------------LTFQEAQGPDLTIENNETWDLEMLKFQV   61 (101)
T ss_dssp             E-EEEEEE-T--T---S--H---HHHT---------TT--------------EEEEE---CCGSS-TTSBSSEEEEEEEE
T ss_pred             EEEEEEeCCC-hhHHHHHHhccccCCC---------ce--------------EEEeeccCCccccCCCcEEeeEEEEEEe
Confidence            5679999999 8899999998863221         11              11121111110   11122666777777


Q ss_pred             c---CHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEE
Q 024779          208 D---DVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFV  252 (262)
Q Consensus       208 ~---dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~  252 (262)
                      +   |+.++.+++++.  .+..++.      .+++.+.||+|..|+|.
T Consensus        62 ~~~~Dl~~L~~~le~~--~~fidKk------~k~l~~~Dps~IElWFe  101 (101)
T PF14507_consen   62 PKDFDLAALKSHLEEQ--EFFIDKK------EKFLVTSDPSQIELWFE  101 (101)
T ss_dssp             S-S--HHHHHHHTTTS---EE--TT-------SEEEEE-TTS-EEEEE
T ss_pred             cCcccHHHHHHHhccc--ceEecCC------ceEEEEECCcceEEEeC
Confidence            7   788899999984  3333332      47899999999999873

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=96.98  E-value=0.056  Score=37.50  Aligned_cols=96  Identities=19%  Similarity=0.355  Sum_probs=53.4

Q ss_pred             CCHHHHHHHHHhhcCc-EEEEEecCCC------CcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCH-
Q 024779            9 GDLDRTIKFYTECLGM-KLLRKRDIPE------EKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDV-   80 (262)
Q Consensus         9 ~d~~~a~~fY~~~lG~-~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~-   80 (262)
                      .+.++|.+||+++||- ++......++      +...++.+.+++.    .+......  +....+++ ..+++.++|. 
T Consensus        11 g~a~eA~~fY~~vf~~~~i~~~~~~~~~~~~~~~~v~ha~l~i~g~----~lm~~D~~--~~~~~~~~-~sl~i~~~~~e   83 (116)
T PF06983_consen   11 GNAEEALEFYKEVFGGSEIMTFGDYPDDEPEWKDKVMHAELTIGGQ----KLMASDGG--PDFPFGNN-ISLCIECDDEE   83 (116)
T ss_dssp             S-HHHHHHHHHHHSTTEEEEEEEE-TTTCTTHTTSEEEEEEEETTE----EEEEEEES--TS----TT-EEEEEEESSHH
T ss_pred             CCHHHHHHHHHHHcCCCEEEEEeECCCCCCCCCCcEEEEEEEECCe----EEEEECCC--CCCCCCCc-EEEEEEcCCHH
Confidence            6899999999999984 3333222221      2334555555432    22222222  22233334 3588888875 


Q ss_pred             --HHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEE
Q 024779           81 --AKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  122 (262)
Q Consensus        81 --~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~  122 (262)
                        +++.++|.+.|-          +.. ....+.|..|..|.|+
T Consensus        84 e~~~~f~~Ls~gG~----------~~~-~~G~v~DkFGv~Wqiv  116 (116)
T PF06983_consen   84 EIDRIFDKLSEGGQ----------WFS-RYGWVTDKFGVSWQIV  116 (116)
T ss_dssp             HHHHHHHHHHTTTE----------TCC-EEEEEE-TTS-EEEEE
T ss_pred             HHHHHHHHHHcCCC----------ccc-eeEEEEeCCCCEEEeC
Confidence              455677777663          223 6677899999999875

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=96.26  E-value=0.06  Score=37.36  Aligned_cols=96  Identities=21%  Similarity=0.267  Sum_probs=50.2

Q ss_pred             cChhhhHHHHHHhcCCee-eeeccCcCc------cceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecC--
Q 024779          139 GDLDRSINFYEQAFGMEL-LRKRDNPEY------KYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDD--  209 (262)
Q Consensus       139 ~d~~~~~~FY~~~lG~~~-~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~d--  209 (262)
                      .+.++|.+||.++||-.. ......++.      ....+.+...    +..+-.....  .....+ ....+++.++|  
T Consensus        11 g~a~eA~~fY~~vf~~~~i~~~~~~~~~~~~~~~~v~ha~l~i~----g~~lm~~D~~--~~~~~~-~~~sl~i~~~~~e   83 (116)
T PF06983_consen   11 GNAEEALEFYKEVFGGSEIMTFGDYPDDEPEWKDKVMHAELTIG----GQKLMASDGG--PDFPFG-NNISLCIECDDEE   83 (116)
T ss_dssp             S-HHHHHHHHHHHSTTEEEEEEEE-TTTCTTHTTSEEEEEEEET----TEEEEEEEES--TS-----TTEEEEEEESSHH
T ss_pred             CCHHHHHHHHHHHcCCCEEEEEeECCCCCCCCCCcEEEEEEEEC----CeEEEEECCC--CCCCCC-CcEEEEEEcCCHH
Confidence            589999999999999432 222222211      1112222221    2223222222  112223 33667777765  


Q ss_pred             -HHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEE
Q 024779          210 -VYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFV  252 (262)
Q Consensus       210 -l~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~  252 (262)
                       ++++.++|.+-|.          +. ..+..++|..|..|.|+
T Consensus        84 e~~~~f~~Ls~gG~----------~~-~~~G~v~DkFGv~Wqiv  116 (116)
T PF06983_consen   84 EIDRIFDKLSEGGQ----------WF-SRYGWVTDKFGVSWQIV  116 (116)
T ss_dssp             HHHHHHHHHHTTTE----------TC-CEEEEEE-TTS-EEEEE
T ss_pred             HHHHHHHHHHcCCC----------cc-ceeEEEEeCCCCEEEeC
Confidence             5566778887765          22 27788999999999885

>PF15067 FAM124: FAM124 family

Probab=96.06  E-value=0.12  Score=39.76  Aligned_cols=125  Identities=13%  Similarity=0.126  Sum_probs=75.2

Q ss_pred             EEEECCCCCEEEEEEcCCCCCCceeEEeeec--ChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEe
Q 024779          109 AFIEDPDGYKFELLERGPTPEPLCQVMLRVG--DLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELT  186 (262)
Q Consensus       109 ~~~~DP~G~~iel~~~~~~~~~~~~v~l~v~--d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  186 (262)
                      +|-.+|.--.|.+.+-- --..+-.++|.|+  |++.+++||+-+|+-+......    ++....+-..   ....+.+.
T Consensus       108 fysl~~~~PlWavr~VH-~G~EilRftly~~~~N~~d~vr~Yelil~~~~~~~k~----~FC~F~lys~---~~~~iQls  179 (236)
T PF15067_consen  108 FYSLDPGMPLWAVRQVH-YGKEILRFTLYCSFDNYEDMVRFYELILQREPTQQKE----DFCFFTLYSQ---PGLDIQLS  179 (236)
T ss_pred             ceecCCCCceeEEeeee-ccccEEEEEEEecCCCHHHHHHHHHHHhccCcceeeC----CcEEEEEecC---CCeEEEEE
Confidence            44456655666555321 2246677999998  9999999999999988754422    2443333322   34555555


Q ss_pred             eecC-CcccccCCceeEEEEEecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEE
Q 024779          187 YNYG-VTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVF  251 (262)
Q Consensus       187 ~~~~-~~~~~~~~~~~~i~~~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~  251 (262)
                      -+.- ....+......-+.|.|.|+.+++.-|-.--.         |.+.++ .-..|||||.|-|
T Consensus       180 LK~lp~~~~p~p~esavLqF~V~~igqLvpLLPnpc~---------PIS~~r-WqT~D~DGNkILL  235 (236)
T PF15067_consen  180 LKQLPPGMSPEPTESAVLQFRVEDIGQLVPLLPNPCS---------PISETR-WQTEDYDGNKILL  235 (236)
T ss_pred             eccCCCCCCcccccceEEEEEecchhhhcccCCCCcc---------cccCCc-ceeeCCCCCEecc
Confidence            4321 11112223456788999999988765532221         222222 5579999999854

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=95.92  E-value=0.032  Score=37.16  Aligned_cols=90  Identities=13%  Similarity=0.172  Sum_probs=41.3

Q ss_pred             ceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCC-CCCCCCCceeEEEEeC--
Q 024779            2 LHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD-KYDIGTGFGHFGIAVD--   78 (262)
Q Consensus         2 ~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~i~~~v~--   78 (262)
                      ..|.|+|+| +++++||+++||-.+.         ....+            .-.++.... +....-++..+-|.|+  
T Consensus         7 e~i~LNV~d-~~~~~fy~~~f~~~~~---------~~l~f------------~ea~G~DL~~~~~~twDLe~Lkf~V~~~   64 (101)
T PF14507_consen    7 ESIELNVPD-AKSQSFYQSIFGGQLP---------FFLTF------------QEAQGPDLTIENNETWDLEMLKFQVPKD   64 (101)
T ss_dssp             -EEEEEE-T--T---S--H---HHHT---------TTEEE------------EE---CCGSS-TTSBSSEEEEEEEES-S
T ss_pred             EEEEEeCCC-hhHHHHHHhccccCCC---------ceEEE------------eeccCCccccCCCcEEeeEEEEEEecCc
Confidence            468899999 8899999998862210         00111            111111111 1123346777889998  


Q ss_pred             -CHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEE
Q 024779           79 -DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL  121 (262)
Q Consensus        79 -d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel  121 (262)
                       |+.++.+++.+.++-+       + ...+.+.+.||.+..|-+
T Consensus        65 ~Dl~~L~~~le~~~~fi-------d-Kk~k~l~~~Dps~IElWF  100 (101)
T PF14507_consen   65 FDLAALKSHLEEQEFFI-------D-KKEKFLVTSDPSQIELWF  100 (101)
T ss_dssp             --HHHHHHHTTTS-EE----------TT-SEEEEE-TTS-EEEE
T ss_pred             ccHHHHHHHhcccceEe-------c-CCceEEEEECCcceEEEe
Confidence             5888888888854322       1 245667788999987654

>PF15067 FAM124: FAM124 family

Probab=95.71  E-value=0.14  Score=39.48  Aligned_cols=101  Identities=18%  Similarity=0.242  Sum_probs=55.6

Q ss_pred             eEEEEeC--CHHHHHHHHHhhcCcEEEEEecCCCCcceeeEe-eecCCCceeEEEeeec-CCCCCCCCCCCceeEEEEeC
Q 024779            3 HVVYRVG--DLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFL-GYGPEDSHFVIELTYN-YGVDKYDIGTGFGHFGIAVD   78 (262)
Q Consensus         3 hv~l~v~--d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~i~~~v~   78 (262)
                      -++|.|+  |.+.+.+||+-+|+-++.....      +..++ -..+....+++-+-.- .+..+.+.  --.-+.|.|.
T Consensus       131 Rftly~~~~N~~d~vr~Yelil~~~~~~~k~------~FC~F~lys~~~~~iQlsLK~lp~~~~p~p~--esavLqF~V~  202 (236)
T PF15067_consen  131 RFTLYCSFDNYEDMVRFYELILQREPTQQKE------DFCFFTLYSQPGLDIQLSLKQLPPGMSPEPT--ESAVLQFRVE  202 (236)
T ss_pred             EEEEEecCCCHHHHHHHHHHHhccCcceeeC------CcEEEEEecCCCeEEEEEeccCCCCCCcccc--cceEEEEEec
Confidence            3678888  9999999999999988765432      12232 2233333333333221 11111111  1123889999


Q ss_pred             CHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEE
Q 024779           79 DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL  121 (262)
Q Consensus        79 d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel  121 (262)
                      |+.++..-| -+.+..      ..  ..+ -...|||||.|-+
T Consensus       203 ~igqLvpLL-Pnpc~P------IS--~~r-WqT~D~DGNkILL  235 (236)
T PF15067_consen  203 DIGQLVPLL-PNPCSP------IS--ETR-WQTEDYDGNKILL  235 (236)
T ss_pred             chhhhcccC-CCCccc------cc--CCc-ceeeCCCCCEecc
Confidence            987765543 222211      11  122 2258999999843

>PRK11700 hypothetical protein; Provisional

Probab=91.39  E-value=2.2  Score=32.00  Aligned_cols=75  Identities=17%  Similarity=0.185  Sum_probs=43.8

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCc-EEEEEecCCCCcceeeEeeecCC-----CceeEEEeeecCCCCCCCCCCCceeEE
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGM-KLLRKRDIPEEKYTNAFLGYGPE-----DSHFVIELTYNYGVDKYDIGTGFGHFG   74 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~-~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~~i~   74 (262)
                      ++||+++|++.+.|.+|-+..+-. ++......+  +.....+.+...     ..-..+||..++  .+.....|+-||-
T Consensus        40 ~DHialR~n~~~tAe~w~~~l~~~G~llSen~IN--GRPI~l~~L~qPl~~~~w~I~cvELP~P~--~k~Yp~eGWEHIE  115 (187)
T PRK11700         40 ADHIALRCNQNETAERWRQGFLQCGELLSENIIN--GRPICLFELDQPLQVGHWSIDCVELPYPG--EKRYPHEGWEHIE  115 (187)
T ss_pred             CcEEEEeeCCHHHHHHHHHHHHHhchhhhccccC--CeeEEEEEcCCCceeCCcEEEEEEeCCCC--CCCCCCCCceEEE
Confidence            589999999999999999887644 222221111  112333333221     011235554432  3444567999999


Q ss_pred             EEeCC
Q 024779           75 IAVDD   79 (262)
Q Consensus        75 ~~v~d   79 (262)
                      +.++.
T Consensus       116 lVlp~  120 (187)
T PRK11700        116 LVLPG  120 (187)
T ss_pred             EEecC
Confidence            99984

>cd07268 Glo_EDI_BRP_like_4 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=88.62  E-value=5.3  Score=28.75  Aligned_cols=75  Identities=21%  Similarity=0.282  Sum_probs=43.7

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcE-EEEEecCCCCcceeeEeeecCC-----CceeEEEeeecCCCCCCCCCCCceeEE
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMK-LLRKRDIPEEKYTNAFLGYGPE-----DSHFVIELTYNYGVDKYDIGTGFGHFG   74 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~-~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~~i~   74 (262)
                      ++||+++|++.+.+.+|-+..+-.- +...... .| .-...+.+...     ..-..+||..++  .+.....|+-||-
T Consensus         2 ~DHialR~n~~~~A~~w~~~l~~~G~llSen~I-NG-RPI~l~~L~qPl~~~~~~I~cvELP~P~--~k~Yp~eGWEHIE   77 (149)
T cd07268           2 IDHIALRVNENQTAERWKEGLLQCGELLSENEI-NG-RPIALIKLEKPLQFAGWSISIVELPFPK--DKKYPQEGWEHIE   77 (149)
T ss_pred             CceEEEeeCCHHHHHHHHHHHHHhchhhhcccc-CC-eeEEEEEcCCCceeCCcEEEEEEeCCCC--CCCCCCCCceEEE
Confidence            5899999999999999998877542 2222111 11 12333333221     011234554432  2444567999999


Q ss_pred             EEeCC
Q 024779           75 IAVDD   79 (262)
Q Consensus        75 ~~v~d   79 (262)
                      +.++.
T Consensus        78 ~Vlp~   82 (149)
T cd07268          78 IVIPS   82 (149)
T ss_pred             EEecC
Confidence            99884

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PF06185 YecM: YecM protein; InterPro: IPR010393 This family consists of several bacterial YecM proteins of unknown function

Probab=86.72  E-value=6.8  Score=29.48  Aligned_cols=83  Identities=18%  Similarity=0.249  Sum_probs=42.3

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCc-EEEEEecCCCCcceeeEee------ecCCCceeEEEeeecCCCCCCCCCCCceeE
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGM-KLLRKRDIPEEKYTNAFLG------YGPEDSHFVIELTYNYGVDKYDIGTGFGHF   73 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~-~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i   73 (262)
                      ++||+++|++.+.+.+|-+..+-. ++......+ |+ ....+.      +++.. -..+||..+..  +.....|+-||
T Consensus        35 ~DHialRvn~~~~A~~~~~~l~~~G~llSen~IN-GR-PI~l~~L~qPL~~~~~~-I~~vELP~P~~--K~Yp~eGWEHI  109 (185)
T PF06185_consen   35 IDHIALRVNSNETAERWKQALLQCGELLSENMIN-GR-PICLFKLNQPLQFGGWS-IDCVELPYPKD--KRYPQEGWEHI  109 (185)
T ss_dssp             EEEEEEE-S-HHHHHHHHHHHTTTEEEEEEEEET-TE-EEEEEEEEEEEEETTEE-EEEEEEE---S--S--SS-EEEEE
T ss_pred             CcEEEEecCCHHHHHHHHHHHHHhChhhhhceeC-Ce-eEEEEEcCCchhcCCee-EEEEEeCCCCC--CCCCCCCceEE
Confidence            489999999999999999998865 333332222 11 222222      22211 12355554432  44456799999


Q ss_pred             EEEeCC-HHHHHHHHH
Q 024779           74 GIAVDD-VAKTVELIK   88 (262)
Q Consensus        74 ~~~v~d-~~~~~~~l~   88 (262)
                      -|.++. .+...+++.
T Consensus       110 E~Vip~~~~~~~~~~~  125 (185)
T PF06185_consen  110 EFVIPSDAQTLLEQAL  125 (185)
T ss_dssp             EEE--S-GGGHHHHHH
T ss_pred             EEEecCCHHHHHHHHH
Confidence            999984 444444443

; PDB: 1K4N_A.

>PF13670 PepSY_2: Peptidase propeptide and YPEB domain This Prosite motif covers only the active site

Probab=83.32  E-value=3.9  Score=26.26  Aligned_cols=46  Identities=15%  Similarity=0.050  Sum_probs=34.9

Q ss_pred             CHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          209 DVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       209 dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                      ..+++.+++++.|.++..-..+..+  .+-+...|.+|+.+++.=++.
T Consensus        30 ~~~~~~~~l~~~G~~v~~ve~~~~g--~yev~~~~~dG~~~ev~vD~~   75 (83)
T PF13670_consen   30 SIEQAVAKLEAQGYQVREVEFDDDG--CYEVEARDKDGKKVEVYVDPA   75 (83)
T ss_pred             CHHHHHHHHHhcCCceEEEEEcCCC--EEEEEEEECCCCEEEEEEcCC
Confidence            7899999999999977654332222  466889999999999976554

This is family M4 in the peptidase classification.

>PF13670 PepSY_2: Peptidase propeptide and YPEB domain This Prosite motif covers only the active site

Probab=82.06  E-value=5.9  Score=25.42  Aligned_cols=44  Identities=20%  Similarity=0.239  Sum_probs=33.8

Q ss_pred             CHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEc
Q 024779           79 DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  124 (262)
Q Consensus        79 d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  124 (262)
                      +.+++.+.+.+.|+.+..  .+...++.+.+...|.+|..+++.-.
T Consensus        30 ~~~~~~~~l~~~G~~v~~--ve~~~~g~yev~~~~~dG~~~ev~vD   73 (83)
T PF13670_consen   30 SIEQAVAKLEAQGYQVRE--VEFDDDGCYEVEARDKDGKKVEVYVD   73 (83)
T ss_pred             CHHHHHHHHHhcCCceEE--EEEcCCCEEEEEEEECCCCEEEEEEc
Confidence            678999999999996643  24423356778889999999999854

This is family M4 in the peptidase classification.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	262
1f9z_A	135	Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I		4e-42
1f9z_A	135	Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I		4e-32
2c21_A	144	Specificity Of The Trypanothione-Dependednt Leishma		2e-28
2c21_A	144	Specificity Of The Trypanothione-Dependednt Leishma		4e-22
3zi1_A	330	Crystal Structure Of Human Glyoxalase Domain-contai		1e-22
2za0_A	184	Crystal Structure Of Mouse Glyoxalase I Complexed W		1e-13
2za0_A	184	Crystal Structure Of Mouse Glyoxalase I Complexed W		8e-12
1fro_A	183	Human Glyoxalase I With Benzyl-Glutathione Inhibito		3e-13
1fro_A	183	Human Glyoxalase I With Benzyl-Glutathione Inhibito		1e-10
3vw9_A	187	Human Glyoxalase I With An N-Hydroxypyridone Inhibi		3e-13
3vw9_A	187	Human Glyoxalase I With An N-Hydroxypyridone Inhibi		6e-11
1bh5_A	183	Human Glyoxalase I Q33e, E172q Double Mutant Length		8e-13
1bh5_A	183	Human Glyoxalase I Q33e, E172q Double Mutant Length		2e-10
3oa4_A	161	Crystal Structure Of Hypothetical Protein Bh1468 Fr		8e-04

>pdb|1F9Z|A Chain A, Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I From Escherichia Coli Length = 135

Iteration: 1
 Score =  167 bits (424), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 78/123 (63%), Positives = 96/123 (78%)
Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
           +LH + RVGDL R+I FYT+ LGMKLLR  + PE KY+ AF+GYGPE    VIELTYN+G
Sbjct: 3   LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWG 62
Query: 61  VDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 120
           VDKY++GT +GH  ++VD+ A+  E I+  GG VTRE GPVKGG TVIAF+EDPDGYK E
Sbjct: 63  VDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIE 122
Query: 121 LLE 123
           L+E
Sbjct: 123 LIE 125

>pdb|1F9Z|A Chain A, Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I From Escherichia Coli Length = 135

Iteration: 1
 Score =  134 bits (338), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 64/126 (50%), Positives = 83/126 (65%)
Query: 131 LCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYG 190
           L   MLRVGDL RSI+FY +  GM+LLR  +NPEYKY++A +GYGPE +  V+ELTYN+G
Sbjct: 3   LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWG 62
Query: 191 VTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTV 250
           V  Y+ G AY  IA+  D+  +  E I+  GG VTRE GP+ G  T I    DPDG+K  
Sbjct: 63  VDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIE 122
Query: 251 FVDNVD 256
            ++  D
Sbjct: 123 LIEEKD 128

>pdb|2C21|A Chain A, Specificity Of The Trypanothione-Dependednt Leishmania Major Glyoxalase I: Structure And Biochemical Comparison With The Human Enzyme Length = 144

Iteration: 1
 Score =  122 bits (306), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 65/122 (53%), Positives = 80/122 (65%), Gaps = 5/122 (4%)
Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
           MLH + RVGDLDR+IKFYTE LGMK+LRK D+PE+KYT  FLGYGPE S  V+ELTYNYG
Sbjct: 9   MLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYG 68
Query: 61  VDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 120
           V  Y     +GH  I V+DV + V  ++     +  E       +  +AF+ DPDGY  E
Sbjct: 69  VTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYE-----DESGFMAFVVDPDGYYIE 123
Query: 121 LL 122
           LL
Sbjct: 124 LL 125

>pdb|2C21|A Chain A, Specificity Of The Trypanothione-Dependednt Leishmania Major Glyoxalase I: Structure And Biochemical Comparison With The Human Enzyme Length = 144

Iteration: 1
 Score =  101 bits (252), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 48/80 (60%), Positives = 57/80 (71%)
Query: 131 LCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYG 190
           +   M+RVGDLDRSI FY +  GM++LRK D PE KYT+  +GYGPE  + VLELTYNYG
Sbjct: 9   MLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYG 68
Query: 191 VTDYDKGNAYAQIAIGTDDV 210
           VT Y    AY  IAIG +DV
Sbjct: 69  VTSYKHDEAYGHIAIGVEDV 88

>pdb|3ZI1|A Chain A, Crystal Structure Of Human Glyoxalase Domain-containing Protein 4 (glod4) Length = 330

Iteration: 1
 Score =  103 bits (257), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/277 (31%), Positives = 128/277 (46%), Gaps = 43/277 (15%)
Query: 2   LHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEE-----------KYTNAFLGYGPEDSH 50
           LH V++VG+  +T +FY + LGMK+LR  +  E            K++   +G+GPED H
Sbjct: 29  LHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDH 88
Query: 51  FVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAF 110
           FV ELTYNYGV  Y +G  F    +A          ++           P+      +  
Sbjct: 89  FVAELTYNYGVGDYKLGNDFMGITLASSQAVSNARKLEW----------PLTEVAEGVFE 138
Query: 111 IEDPDGYKFELLERG-PTPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTI 169
            E P GYKF L  R  P  +P+ +V L V DL +S+N++    GM++    +N E K   
Sbjct: 139 TEAPGGYKFYLQNRSLPQSDPVLKVTLAVSDLQKSLNYWCNLLGMKIY---ENDEEKQR- 194
Query: 170 AMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGT--------DDVYKTAEAIKLFG 221
           A++GY   D    LEL    G  D+    A+ +IA           +D+ K  E  K+  
Sbjct: 195 ALLGYA--DNQCKLELQGVKGGVDH--AAAFGRIAFSCPQKELPDLEDLMKR-ENQKILT 249
Query: 222 GKVTREPGPLPGINT-KITACLDPDGWKTVFVDNVDF 257
             V+ +    PG  T ++    DPDG +  FV +  F
Sbjct: 250 PLVSLD---TPGKATVQVVILADPDGHEICFVGDEAF 283

>pdb|2ZA0|A Chain A, Crystal Structure Of Mouse Glyoxalase I Complexed With Methyl-Gerfelin Length = 184

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 74/148 (50%), Gaps = 30/148 (20%)
Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYG-----PEDSH----- 50
           +   + R+ D  +++ FYT  LG+ LL+K D P  K++  FL Y      P+D       
Sbjct: 32  LQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAW 91
Query: 51  -----FVIELTYNYGVD-----KYDIGT----GFGHFGIAVDDVAKTVELIKAKGGKVTR 96
                  +ELT+N+G +      Y  G     GFGH GIAV DV    +  +  G K  +
Sbjct: 92  TFSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVK 151
Query: 97  EP--GPVKGGNTVIAFIEDPDGYKFELL 122
           +P  G +KG    +AFI+DPDGY  E+L
Sbjct: 152 KPDDGKMKG----LAFIQDPDGYWIEIL 175

>pdb|2ZA0|A Chain A, Crystal Structure Of Mouse Glyoxalase I Complexed With Methyl-Gerfelin Length = 184

Iteration: 1
 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 78/182 (42%), Gaps = 45/182 (24%)
Query: 97  EPGPVKGG---NTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRSINFYEQAFG 153
           EP P   G    T  +   DPD    + L        L Q MLR+ D  +S++FY +  G
Sbjct: 3   EPQPASSGLTDETAFSCCSDPDPSTKDFL--------LQQTMLRIKDPKKSLDFYTRVLG 54
Query: 154 MELLRKRDNPEYKYTIAMMGYGPEDKN-----------------VVLELTYNYGVTD--- 193
           + LL+K D P  K+++  + Y  EDKN                   LELT+N+G  D   
Sbjct: 55  LTLLQKLDFPAMKFSLYFLAY--EDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDDET 112
Query: 194 --YDKGNA----YAQIAIGTDDVYKTAEAIKLFGGKVTREP--GPLPGINTKITACLDPD 245
             Y  GN+    +  I I   DVY   +  +  G K  ++P  G + G    +    DPD
Sbjct: 113 QSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKG----LAFIQDPD 168
Query: 246 GW 247
           G+
Sbjct: 169 GY 170

>pdb|1FRO|A Chain A, Human Glyoxalase I With Benzyl-Glutathione Inhibitor Length = 183

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 75/150 (50%), Gaps = 34/150 (22%)
Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFV-------- 52
           +   + RV D  +++ FYT  LGM L++K D P  K++  FL Y  ED + +        
Sbjct: 31  LQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAY--EDKNDIPKEKDEKI 88
Query: 53  ---------IELTYNYGVD-----KYDIGT----GFGHFGIAVDDVAKTVELIKAKGGKV 94
                    +ELT+N+G +      Y  G     GFGH GIAV DV    +  +  G K 
Sbjct: 89  AWALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKF 148
Query: 95  TREP--GPVKGGNTVIAFIEDPDGYKFELL 122
            ++P  G +KG    +AFI+DPDGY  E+L
Sbjct: 149 VKKPDDGKMKG----LAFIQDPDGYWIEIL 174

>pdb|1FRO|A Chain A, Human Glyoxalase I With Benzyl-Glutathione Inhibitor Length = 183

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 79/182 (43%), Gaps = 45/182 (24%)
Query: 97  EPGPVKGGNT---VIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRSINFYEQAFG 153
           EP P  GG T    ++   D D    + L        L Q MLRV D  +S++FY +  G
Sbjct: 2   EPQPPSGGLTDEAALSCCSDADPSTKDFL--------LQQTMLRVKDPKKSLDFYTRVLG 53
Query: 154 MELLRKRDNPEYKYTIAMMGYGPEDKN-----------------VVLELTYNYGVTD--- 193
           M L++K D P  K+++  + Y  EDKN                   LELT+N+G  D   
Sbjct: 54  MTLIQKCDFPIMKFSLYFLAY--EDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDET 111
Query: 194 --YDKGNA----YAQIAIGTDDVYKTAEAIKLFGGKVTREP--GPLPGINTKITACLDPD 245
             Y  GN+    +  I I   DVY   +  +  G K  ++P  G + G    +    DPD
Sbjct: 112 QSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKG----LAFIQDPD 167
Query: 246 GW 247
           G+
Sbjct: 168 GY 169

>pdb|3VW9|A Chain A, Human Glyoxalase I With An N-Hydroxypyridone Inhibitor Length = 187

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 75/150 (50%), Gaps = 34/150 (22%)
Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFV-------- 52
           +   + RV D  +++ FYT  LGM L++K D P  K++  FL Y  ED + +        
Sbjct: 35  LQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAY--EDKNDIPKEKDEKI 92
Query: 53  ---------IELTYNYGVD-----KYDIGT----GFGHFGIAVDDVAKTVELIKAKGGKV 94
                    +ELT+N+G +      Y  G     GFGH GIAV DV    +  +  G K 
Sbjct: 93  AWALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKF 152
Query: 95  TREP--GPVKGGNTVIAFIEDPDGYKFELL 122
            ++P  G +KG    +AFI+DPDGY  E+L
Sbjct: 153 VKKPDDGKMKG----LAFIQDPDGYWIEIL 178

>pdb|3VW9|A Chain A, Human Glyoxalase I With An N-Hydroxypyridone Inhibitor Length = 187

Iteration: 1
 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 80/187 (42%), Gaps = 45/187 (24%)
Query: 92  GKVTREPGPVKGGNT---VIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRSINFY 148
           G    EP P  GG T    ++   D D    + L        L Q MLRV D  +S++FY
Sbjct: 1   GSHMAEPQPPSGGLTDEAALSCCSDADPSTKDFL--------LQQTMLRVKDPKKSLDFY 52
Query: 149 EQAFGMELLRKRDNPEYKYTIAMMGYGPEDKN-----------------VVLELTYNYGV 191
            +  GM L++K D P  K+++  + Y  EDKN                   LELT+N+G 
Sbjct: 53  TRVLGMTLIQKCDFPIMKFSLYFLAY--EDKNDIPKEKDEKIAWALSRKATLELTHNWGT 110
Query: 192 TD-----YDKGNA----YAQIAIGTDDVYKTAEAIKLFGGKVTREP--GPLPGINTKITA 240
            D     Y  GN+    +  I I   DVY   +  +  G K  ++P  G + G    +  
Sbjct: 111 EDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKG----LAF 166
Query: 241 CLDPDGW 247
             DPDG+
Sbjct: 167 IQDPDGY 173

>pdb|1BH5|A Chain A, Human Glyoxalase I Q33e, E172q Double Mutant Length = 183

Iteration: 1
 Score = 70.5 bits (171), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 75/150 (50%), Gaps = 34/150 (22%)
Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFV-------- 52
           +   + RV D  +++ FYT  LGM L++K D P  K++  FL Y  ED + +        
Sbjct: 31  LQETMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAY--EDKNDIPKEKDEKI 88
Query: 53  ---------IELTYNYGVD-----KYDIGT----GFGHFGIAVDDVAKTVELIKAKGGKV 94
                    +ELT+N+G +      Y  G     GFGH GIAV DV    +  +  G K 
Sbjct: 89  AWALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKF 148
Query: 95  TREP--GPVKGGNTVIAFIEDPDGYKFELL 122
            ++P  G +KG    +AFI+DPDGY  ++L
Sbjct: 149 VKKPDDGKMKG----LAFIQDPDGYWIQIL 174

>pdb|1BH5|A Chain A, Human Glyoxalase I Q33e, E172q Double Mutant Length = 183

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 81/190 (42%), Gaps = 46/190 (24%)
Query: 97  EPGPVKGGNT---VIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRSINFYEQAFG 153
           EP P  GG T    ++   D D    + L        L + MLRV D  +S++FY +  G
Sbjct: 2   EPQPPSGGLTDEAALSCCSDADPSTKDFL--------LQETMLRVKDPKKSLDFYTRVLG 53
Query: 154 MELLRKRDNPEYKYTIAMMGYGPEDKN-----------------VVLELTYNYGVTD--- 193
           M L++K D P  K+++  + Y  EDKN                   LELT+N+G  D   
Sbjct: 54  MTLIQKCDFPIMKFSLYFLAY--EDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDET 111
Query: 194 --YDKGNA----YAQIAIGTDDVYKTAEAIKLFGGKVTREP--GPLPGINTKITACLDPD 245
             Y  GN+    +  I I   DVY   +  +  G K  ++P  G + G    +    DPD
Sbjct: 112 QSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKG----LAFIQDPD 167
Query: 246 G-WKTVFVDN 254
           G W  +   N
Sbjct: 168 GYWIQILNPN 177

>pdb|3OA4|A Chain A, Crystal Structure Of Hypothetical Protein Bh1468 From Bacillus Halodurans C-125 Length = 161

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 52/133 (39%), Gaps = 4/133 (3%)
Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           H+   V  +   + FY   L +KLL   D+P +    AFL  G      +  L+    + 
Sbjct: 11  HIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEESPIA 70
Query: 63  KY--DIGTGFGHFGIAVDDVAKTVELIKAKGGK-VTREPGP-VKGGNTVIAFIEDPDGYK 118
           K+    G G  H  I V  + + ++ +K  G + +  EP P  +G            G  
Sbjct: 71  KFIQKRGEGIHHIAIGVKSIEERIQEVKENGVQMINDEPVPGARGAQVAFLHPRSARGVL 130
Query: 119 FELLERGPTPEPL 131
           +E  E+    E L
Sbjct: 131 YEFCEKKEQAENL 143

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	262
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	1e-61
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	7e-41
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	1e-61
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	2e-39
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	6e-44
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	2e-32
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	1e-38
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	3e-23
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	2e-38
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	3e-12
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	6e-10
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	2e-35
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	3e-22
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	6e-32
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	9e-21
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	7e-32
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	6e-19
2p25_A	126	Glyoxalase family protein; structural genomics, MC	2e-31
2p25_A	126	Glyoxalase family protein; structural genomics, MC	1e-17
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	4e-29
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	4e-19
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	7e-27
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	2e-14
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	9e-26
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-17
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	8e-24
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	7e-15
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	2e-23
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	3e-14
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-21
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	5e-15
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	6e-21
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	8e-18
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	1e-20
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	5e-08
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	2e-20
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	2e-15
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	3e-18
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	1e-08
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	7e-18
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	1e-06
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	2e-17
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	4e-09
3ghj_A	141	Putative integron gene cassette protein; integron	2e-17
3ghj_A	141	Putative integron gene cassette protein; integron	4e-05
3huh_A	152	Virulence protein STM3117; structural genomics, ny	7e-17
3huh_A	152	Virulence protein STM3117; structural genomics, ny	5e-09
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	1e-16
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	2e-07
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-16
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-06
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	4e-16
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	2e-04
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	7e-16
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	3e-07
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	2e-15
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	3e-07
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	5e-15
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	5e-15
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	3e-06
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	5e-15
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	9e-15
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	6e-09
1nki_A	135	Probable fosfomycin resistance protein; potassium	1e-14
1nki_A	135	Probable fosfomycin resistance protein; potassium	1e-04
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	2e-14
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	3e-07
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	2e-14
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	6e-11
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-13
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	5e-10
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	1e-13
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-13
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-05
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	5e-13
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	5e-13
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	3e-09
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	5e-13
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	6e-13
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	7e-13
3eck_A	365	Protein (homoprotocatechuate 2,3-dioxygenase); oxi	1e-12
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	2e-12
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	1e-04
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	2e-12
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	4e-05
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	2e-12
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	7e-05
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	3e-12
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	4e-04
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	5e-12
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	2e-11
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	2e-08
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	2e-11
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	6e-07
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	4e-11
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	6e-07
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	1e-10
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	2e-05
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	1e-09
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	3e-09
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	9e-05
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	3e-09
2i7r_A	118	Conserved domain protein; structural genomics cons	4e-09
2i7r_A	118	Conserved domain protein; structural genomics cons	6e-08
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	5e-09
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	5e-09
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	2e-05
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	5e-09
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	6e-09
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	5e-08
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	6e-08
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	4e-07
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	4e-04
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	7e-07
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	5e-06
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	8e-07
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	3e-04
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	2e-06
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	9e-06
1xy7_A	166	Unknown protein; structural genomics, protein stru	2e-05
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	2e-04
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	6e-04
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	6e-04

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score =  189 bits (482), Expect = 1e-61
 Identities = 79/131 (60%), Positives = 97/131 (74%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
           +LH + RVGDL R+I FYT+ LGMKLLR  + PE KY+ AF+GYGPE    VIELTYN+G
Sbjct: 3   LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWG 62

Query: 61  VDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 120
           VDKY++GT +GH  ++VD+ A+  E I+  GG VTRE GPVKGG TVIAF+EDPDGYK E
Sbjct: 63  VDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIE 122

Query: 121 LLERGPTPEPL 131
           L+E       L
Sbjct: 123 LIEEKDAGRGL 133

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score =  136 bits (344), Expect = 7e-41
 Identities = 64/129 (49%), Positives = 84/129 (65%)

Query: 133 QVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVT 192
             MLRVGDL RSI+FY +  GM+LLR  +NPEYKY++A +GYGPE +  V+ELTYN+GV 
Sbjct: 5   HTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVD 64

Query: 193 DYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFV 252
            Y+ G AY  IA+  D+  +  E I+  GG VTRE GP+ G  T I    DPDG+K   +
Sbjct: 65  KYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELI 124

Query: 253 DNVDFLKEL 261
           +  D  + L
Sbjct: 125 EEKDAGRGL 133

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score =  189 bits (482), Expect = 1e-61
 Identities = 68/140 (48%), Positives = 82/140 (58%), Gaps = 5/140 (3%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
           MLH + RVGDLDR+IKFYTE LGMK+LRK D+PE+KYT  FLGYGPE S  V+ELTYNYG
Sbjct: 9   MLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYG 68

Query: 61  VDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 120
           V  Y     +GH  I V+DV + V  ++     +  E          +AF+ DPDGY  E
Sbjct: 69  VTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDES-----GFMAFVVDPDGYYIE 123

Query: 121 LLERGPTPEPLCQVMLRVGD 140
           LL      E     M   G 
Sbjct: 124 LLNEKTMMEKAEADMKEQGT 143

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score =  133 bits (336), Expect = 2e-39
 Identities = 54/130 (41%), Positives = 74/130 (56%), Gaps = 5/130 (3%)

Query: 133 QVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVT 192
             M+RVGDLDRSI FY +  GM++LRK D PE KYT+  +GYGPE  + VLELTYNYGVT
Sbjct: 11  HTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVT 70

Query: 193 DYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFV 252
            Y    AY  IAIG +DV +    ++     +  E          +   +DPDG+    +
Sbjct: 71  SYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDES-----GFMAFVVDPDGYYIELL 125

Query: 253 DNVDFLKELE 262
           +    +++ E
Sbjct: 126 NEKTMMEKAE 135

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score =  146 bits (369), Expect = 6e-44
 Identities = 47/155 (30%), Positives = 71/155 (45%), Gaps = 26/155 (16%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPED------------ 48
           +   + R+ D  +++ FYT  LG+ LL+K D P  K++  FL Y  ++            
Sbjct: 32  LQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAW 91

Query: 49  ---SHFVIELTYNYGVD-----KYDIG----TGFGHFGIAVDDVAKTVELIKAKGGKVTR 96
                  +ELT+N+G +      Y  G     GFGH GIAV DV    +  +  G K  +
Sbjct: 92  TFSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVK 151

Query: 97  EPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPL 131
           +P    G    +AFI+DPDGY  E+L        +
Sbjct: 152 KPDD--GKMKGLAFIQDPDGYWIEILNPNKIATII 184

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score =  116 bits (291), Expect = 2e-32
 Identities = 49/190 (25%), Positives = 77/190 (40%), Gaps = 37/190 (19%)

Query: 97  EPGPVKGG---NTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRSINFYEQAFG 153
           EP P   G    T  +   DPD    + L        L Q MLR+ D  +S++FY +  G
Sbjct: 3   EPQPASSGLTDETAFSCCSDPDPSTKDFL--------LQQTMLRIKDPKKSLDFYTRVLG 54

Query: 154 MELLRKRDNPEYKYTIAMMGYGPED---------------KNVVLELTYNYGVTD----- 193
           + LL+K D P  K+++  + Y  ++               +   LELT+N+G  D     
Sbjct: 55  LTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDDETQS 114

Query: 194 YDKGNA----YAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKT 249
           Y  GN+    +  I I   DVY   +  +  G K  ++P    G    +    DPDG+  
Sbjct: 115 YHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPD--DGKMKGLAFIQDPDGYWI 172

Query: 250 VFVDNVDFLK 259
             ++      
Sbjct: 173 EILNPNKIAT 182

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score =  131 bits (331), Expect = 1e-38
 Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 6/136 (4%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
           + H+   V  +   + FY   L +KLL   D+P +    AFL  G      +  L+    
Sbjct: 9   LDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEESP 68

Query: 61  VDKY--DIGTGFGHFGIAVDDVAKTVELIKAKGGKV-TREPGPVKGGNTVIAFI--EDPD 115
           + K+    G G  H  I V  + + ++ +K  G ++   EP P   G   +AF+      
Sbjct: 69  IAKFIQKRGEGIHHIAIGVKSIEERIQEVKENGVQMINDEPVPGARGAQ-VAFLHPRSAR 127

Query: 116 GYKFELLERGPTPEPL 131
           G  +E  E+    E L
Sbjct: 128 GVLYEFCEKKEQAENL 143

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score = 91.8 bits (228), Expect = 3e-23
 Identities = 24/131 (18%), Positives = 48/131 (36%), Gaps = 13/131 (9%)

Query: 133 QVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVT 192
            + + V  +   + FY  +  ++LL   D P     IA +  G     ++  L+    + 
Sbjct: 11  HIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEESPIA 70

Query: 193 DY--DKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTV 250
            +   +G     IAIG   + +  + +K  G ++  +  P+PG            G +  
Sbjct: 71  KFIQKRGEGIHHIAIGVKSIEERIQEVKENGVQMIND-EPVPG----------ARGAQVA 119

Query: 251 FVDNVDFLKEL 261
           F+        L
Sbjct: 120 FLHPRSARGVL 130

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis} Length = 282

 Score =  134 bits (339), Expect = 2e-38
 Identities = 51/251 (20%), Positives = 75/251 (29%), Gaps = 32/251 (12%)

Query: 8   VGDLDRTIKFYTECLGMKLLRKRDIPEE--KYTNAFLGYGPEDSHFVIELTYNYGVDKYD 65
             D     KFYT   G        +P     Y+ A L         V  +          
Sbjct: 40  TTDQSAAKKFYTSLFGWGY-DDNPVPGGGGVYSMATLNGEA-----VAAIAPMPPGAPEG 93

Query: 66  IGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG 125
           +   +  + IAVDDV   V+ +   GG+V      + G    ++FI DP G    L +  
Sbjct: 94  MPPIWNTY-IAVDDVDAVVDKVVPGGGQVMMPAFDI-GDAGRMSFITDPTGAAVGLWQAN 151

Query: 126 P--------TPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPE 177
                        L    L     D ++ FYE   G+            Y +   G    
Sbjct: 152 RHIGATLVNETGTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQNYRVLKAGDAEV 211

Query: 178 DKNVVLELTYNYGVTDYDKGN--AYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGIN 235
                       G  +        +  +    DD   TA      GG+V  EP  +P + 
Sbjct: 212 -----------GGCMEPPMPGVPNHWHVYFAVDDADATAAKAAAAGGQVIAEPADIPSV- 259

Query: 236 TKITACLDPDG 246
            +     DP G
Sbjct: 260 GRFAVLSDPQG 270

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis} Length = 282

 Score = 64.2 bits (156), Expect = 3e-12
 Identities = 26/121 (21%), Positives = 39/121 (32%), Gaps = 14/121 (11%)

Query: 8   VGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIG 67
               D  + FY   +G+          + Y     G                G  +  + 
Sbjct: 172 TDKPDLALAFYEAVVGLTHSSMEIAAGQNYRVLKAGDAEV-----------GGCMEPPMP 220

Query: 68  TGFGHFGI--AVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG 125
               H+ +  AVDD   T     A GG+V  EP  +       A + DP G  F +L+  
Sbjct: 221 GVPNHWHVYFAVDDADATAAKAAAAGGQVIAEPADIPSV-GRFAVLSDPQGAIFSVLKAA 279

Query: 126 P 126
           P
Sbjct: 280 P 280

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis} Length = 282

 Score = 57.6 bits (139), Expect = 6e-10
 Identities = 20/113 (17%), Positives = 34/113 (30%), Gaps = 10/113 (8%)

Query: 136 LRVGDLDRSINFYEQAFGMELLRKRDNPEY--KYTIAMMGYGPEDKNVVLELTYNYGVTD 193
           L+  D   +  FY   FG         P     Y++A +         V  +        
Sbjct: 38  LQTTDQSAAKKFYTSLFGWG-YDDNPVPGGGGVYSMATLNGEA-----VAAIAPMPPGAP 91

Query: 194 YDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDG 246
                 +    I  DDV    + +   GG+V      +     +++   DP G
Sbjct: 92  EGMPPIWN-TYIAVDDVDAVVDKVVPGGGQVMMPAFDIGDA-GRMSFITDPTG 142

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score =  122 bits (309), Expect = 2e-35
 Identities = 28/128 (21%), Positives = 50/128 (39%), Gaps = 5/128 (3%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
           + HV   V DL++   FY   LG ++     +PE   +  F+  G      +  L  +  
Sbjct: 6   LNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLDSP 65

Query: 61  VDKY---DIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFI--EDPD 115
           +  +   +   G  H  I VD++   V  +K K  +   E   +      + F+  +D  
Sbjct: 66  IAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCG 125

Query: 116 GYKFELLE 123
           G   EL +
Sbjct: 126 GVLVELEQ 133

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score = 88.3 bits (219), Expect = 3e-22
 Identities = 22/120 (18%), Positives = 44/120 (36%), Gaps = 7/120 (5%)

Query: 133 QVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVT 192
            V + V DL+++  FY+   G ++      PE+  ++  +  G     ++  L  +  + 
Sbjct: 8   HVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLDSPIA 67

Query: 193 DY---DKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACL---DPDG 246
            +   +K      I I  D++      +K    +   E     G + K    L   D  G
Sbjct: 68  GFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEE-VKIGAHGKPVIFLHPKDCGG 126

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score =  113 bits (285), Expect = 6e-32
 Identities = 25/132 (18%), Positives = 46/132 (34%), Gaps = 14/132 (10%)

Query: 1   MLHVVYR--VGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN 58
           +L ++ R  V DL+  ++FY E L   +  + +IP+     A +      +         
Sbjct: 5   ILQILSRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQISTILLIA--------- 55

Query: 59  YGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 118
            G ++             VD + K    ++  G ++ R P  V  G      +   DG  
Sbjct: 56  -GSEEALKPFRNTQATFLVDSLDKFKTFLEENGAEIIRGPSKVPTGRN--MTVRHSDGSV 112

Query: 119 FELLERGPTPEP 130
            E +E       
Sbjct: 113 IEYVEHSKIEAE 124

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score = 84.5 bits (209), Expect = 9e-21
 Identities = 23/127 (18%), Positives = 45/127 (35%), Gaps = 12/127 (9%)

Query: 134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD 193
             L V DL+ ++ FYE+     +  + + P+    +A +         +L +    G  +
Sbjct: 10  SRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQIST-------ILLI---AGSEE 59

Query: 194 YDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVD 253
             K     Q     D + K    ++  G ++ R P  +P            DG    +V+
Sbjct: 60  ALKPFRNTQATFLVDSLDKFKTFLEENGAEIIRGPSKVPTGRNMT--VRHSDGSVIEYVE 117

Query: 254 NVDFLKE 260
           +     E
Sbjct: 118 HSKIEAE 124

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score =  113 bits (284), Expect = 7e-32
 Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 10/131 (7%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHF----VIELT 56
           + HV   V D D++ +FY   LG +++R+   P+       L  G  +       + +  
Sbjct: 6   VHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTDSN 65

Query: 57  YNYGVDKYDI---GTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGN-TVIAFIE 112
           Y    ++        G  H    V+DV  + + + A G  +  E           +AF  
Sbjct: 66  YCAPPERISWPREACGLRHLAFYVEDVEASRQELIALG--IRVEEVRYDDYTGKKMAFFF 123

Query: 113 DPDGYKFELLE 123
           DPDG   EL E
Sbjct: 124 DPDGLPLELHE 134

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score = 79.4 bits (196), Expect = 6e-19
 Identities = 25/120 (20%), Positives = 41/120 (34%), Gaps = 8/120 (6%)

Query: 134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPED----KNVVLELTYNY 189
           V L V D D+S  FY    G E++R+   P+       +  G  +     N + +  Y  
Sbjct: 9   VALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTDSNYCA 68

Query: 190 GVTDYDKGNAYAQ---IAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDG 246
                           +A   +DV  + + +   G +V            K+    DPDG
Sbjct: 69  PPERISWPREACGLRHLAFYVEDVEASRQELIALGIRVEE-VRYDDYTGKKMAFFFDPDG 127

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score =  112 bits (281), Expect = 2e-31
 Identities = 30/124 (24%), Positives = 46/124 (37%), Gaps = 4/124 (3%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
           + HV     +   T  FY E LG ++LR+   PE+      L  G ++            
Sbjct: 6   IHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQELEI-FISDQFPA 64

Query: 61  VDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTV-IAFIEDPDGYKF 119
              Y    G  H    V+ + + +  +  +G  +  EP  V       + F  DPDG   
Sbjct: 65  RPSYPEALGLRHLAFKVEHIEEVIAFLNEQG--IETEPLRVDDFTGKKMTFFFDPDGLPL 122

Query: 120 ELLE 123
           EL E
Sbjct: 123 ELHE 126

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score = 75.9 bits (187), Expect = 1e-17
 Identities = 24/117 (20%), Positives = 43/117 (36%), Gaps = 10/117 (8%)

Query: 134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNY---G 190
           V +   +   + NFY +  G E+LR+   PE       +  G    +  LE+  +     
Sbjct: 9   VAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLG----SQELEIFISDQFPA 64

Query: 191 VTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPL-PGINTKITACLDPDG 246
              Y +      +A   + + +    +   G  +  EP  +      K+T   DPDG
Sbjct: 65  RPSYPEALGLRHLAFKVEHIEEVIAFLNEQG--IETEPLRVDDFTGKKMTFFFDPDG 119

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score =  106 bits (266), Expect = 4e-29
 Identities = 27/129 (20%), Positives = 49/129 (37%), Gaps = 10/129 (7%)

Query: 2   LHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGV 61
            H+ Y V ++D  +K +     ++          K    F+  G     + +EL    G 
Sbjct: 9   HHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVING----GYRVELVAPDGE 64

Query: 62  DK-----YDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKG-GNTVIAFIEDPD 115
           D         G+   H    V+D+ K++E +   G  + ++        N  +AF+   D
Sbjct: 65  DSPINKTIKKGSTPYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTD 124

Query: 116 GYKFELLER 124
               ELLE+
Sbjct: 125 IGLIELLEK 133

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score = 79.8 bits (197), Expect = 4e-19
 Identities = 20/119 (16%), Positives = 42/119 (35%), Gaps = 10/119 (8%)

Query: 134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD 193
           +   V ++D ++  +++   +E      +   K  I  +  G       +EL    G   
Sbjct: 11  IGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVING----GYRVELVAPDGEDS 66

Query: 194 -----YDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITA-CLDPDG 246
                  KG+    I    +D+ K+ E +   G  + ++    P I+ +  A     D 
Sbjct: 67  PINKTIKKGSTPYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDI 125

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score =  101 bits (252), Expect = 7e-27
 Identities = 26/136 (19%), Positives = 40/136 (29%), Gaps = 12/136 (8%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEE--------KYTNAFLGYGPEDSHFVIE 54
           H+   V D+  +  FY   LG+  L   ++P          K  N     G     F   
Sbjct: 22  HIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEP 81

Query: 55  LTYNYGVDKYDIGTGFGHFGIAVDD--VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIE 112
                  +     T   H    +D     + V +I      +    GPV        +  
Sbjct: 82  ELSPPDPNPEKTFTRAYHLAFDIDPQLFDRAVTVIGENK--IAIAHGPVTRPTGRGVYFY 139

Query: 113 DPDGYKFELLERGPTP 128
           DPDG+  E+       
Sbjct: 140 DPDGFMIEIRCDPEAE 155

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score = 68.0 bits (166), Expect = 2e-14
 Identities = 20/121 (16%), Positives = 30/121 (24%), Gaps = 8/121 (6%)

Query: 134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPE--------YKYTIAMMGYGPEDKNVVLEL 185
           + L V D+  S  FY    G+  L   + P          K    +   G          
Sbjct: 23  IALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEPE 82

Query: 186 TYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPD 245
                            +A   D          +   K+    GP+     +     DPD
Sbjct: 83  LSPPDPNPEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTGRGVYFYDPD 142

Query: 246 G 246
           G
Sbjct: 143 G 143

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score = 98.3 bits (244), Expect = 9e-26
 Identities = 27/126 (21%), Positives = 52/126 (41%), Gaps = 5/126 (3%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
           +      V D  +   FYT  LG  +     +  +++        P+ +  ++E + +  
Sbjct: 27  IHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQLLLEPSSHAA 86

Query: 61  VDKYD---IGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGY 117
           V  +    +  G      AVDD+A   E + A G + T+EP  +     V A ++D  G 
Sbjct: 87  VTPFKEALVADGIPAASFAVDDIAAEYERLSALGVRFTQEPTDMGPV--VTAILDDTCGN 144

Query: 118 KFELLE 123
             +L++
Sbjct: 145 LIQLMQ 150

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score = 76.7 bits (188), Expect = 1e-17
 Identities = 19/119 (15%), Positives = 42/119 (35%), Gaps = 5/119 (4%)

Query: 131 LCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYG 190
           +    + V D  ++ +FY    G  +         ++   +    P+   ++LE + +  
Sbjct: 27  IHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQLLLEPSSHAA 86

Query: 191 VTDYDK---GNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDG 246
           VT + +    +     +   DD+    E +   G + T+EP  +           D  G
Sbjct: 87  VTPFKEALVADGIPAASFAVDDIAAEYERLSALGVRFTQEPTDMGP--VVTAILDDTCG 143

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 93.0 bits (231), Expect = 8e-24
 Identities = 26/142 (18%), Positives = 47/142 (33%), Gaps = 22/142 (15%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRD-----------IPEEKYTNAFLGYGPEDS 49
           M +V   V  LD  I F+ E +G+ L  + +           +  +    A +     D 
Sbjct: 12  MDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTP--DG 68

Query: 50  HFVIELTYNYGVDKYDI-------GTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVK 102
           H  IEL+                   G+      V+D+ + V  +   G ++  E     
Sbjct: 69  HSRIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEV-VQY 127

Query: 103 GGNTVIAFIEDPDGYKFELLER 124
             +  + +I   +G    L E 
Sbjct: 128 ENSYRLCYIRGVEGILIGLAEE 149

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 69.1 bits (169), Expect = 7e-15
 Identities = 21/131 (16%), Positives = 43/131 (32%), Gaps = 22/131 (16%)

Query: 134 VMLRVGDLDRSINFYEQAFGMELLRKRDN-----------PEYKYTIAMMGYGPEDKNVV 182
           V + V  LD +I+F+E   G+ L  + +                  IAMM     D +  
Sbjct: 15  VSIVVESLDNAISFFE-EIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTP--DGHSR 71

Query: 183 LELTYNYGVTDYDKGNA-------YAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGIN 235
           +EL+                    Y ++    +D+ +    +   G ++  E       +
Sbjct: 72  IELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYEN-S 130

Query: 236 TKITACLDPDG 246
            ++      +G
Sbjct: 131 YRLCYIRGVEG 141

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 91.2 bits (226), Expect = 2e-23
 Identities = 22/126 (17%), Positives = 45/126 (35%), Gaps = 9/126 (7%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
           + HV     +L++  +FY    G       +   + + + FL +   +    +E+     
Sbjct: 4   IEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSF---EDGARLEIMSRTD 60

Query: 61  VD--KYDIGTGFGHFGIAVDDVAK---TVELIKAKGGKVTREPGPVKGGNTVIAFIEDPD 115
           V         G+ H  I+           E ++  G  +  EP    G     + + DP+
Sbjct: 61  VTGKTTGENLGWAHIAISTGTKEAVDELTEKLRQDGFAIAGEPRM-TGDGYYESVVLDPE 119

Query: 116 GYKFEL 121
           G + E+
Sbjct: 120 GNRIEI 125

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 66.5 bits (162), Expect = 3e-14
 Identities = 27/118 (22%), Positives = 44/118 (37%), Gaps = 9/118 (7%)

Query: 134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD 193
           V L   +L++   FY   FG       +N    +    + +   +    LE+     VT 
Sbjct: 7   VALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSF---EDGARLEIMSRTDVTG 63

Query: 194 YDKGNA--YAQIAI---GTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDG 246
              G    +A IAI     + V +  E ++  G  +  EP    G     +  LDP+G
Sbjct: 64  KTTGENLGWAHIAISTGTKEAVDELTEKLRQDGFAIAGEPRM-TGDGYYESVVLDPEG 120

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 86.2 bits (213), Expect = 2e-21
 Identities = 21/128 (16%), Positives = 49/128 (38%), Gaps = 16/128 (12%)

Query: 7   RVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHF----VIELTYNYGVD 62
              D++ +  F+ + LG ++  +R  P+E++   +L     D            +  G  
Sbjct: 12  YCFDINVSQSFFVDVLGFEVKYER--PDEEF--VYLTLDGVDVMLEGIAGKSRKWLSGDL 67

Query: 63  KYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGP---VKGGNTVIA----FIEDPD 115
           ++ +G+G  +F   V D+    + +                 + G+++       ++ PD
Sbjct: 68  EFPLGSGV-NFQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPD 126

Query: 116 GYKFELLE 123
           GY F   +
Sbjct: 127 GYLFRFCQ 134

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 69.3 bits (169), Expect = 5e-15
 Identities = 16/133 (12%), Positives = 36/133 (27%), Gaps = 16/133 (12%)

Query: 135 MLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPE----DKNVVLELTYNYG 190
            L   D++ S +F+    G E+  +R + E+      +         +        +  G
Sbjct: 10  ELYCFDINVSQSFFVDVLGFEVKYERPDEEF----VYLTLDGVDVMLEGIAGKSRKWLSG 65

Query: 191 VTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLP-------GINTKITACLD 243
             ++  G+          D+    + +                          K      
Sbjct: 66  DLEFPLGSGVN-FQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQT 124

Query: 244 PDGWKTVFVDNVD 256
           PDG+   F  ++ 
Sbjct: 125 PDGYLFRFCQDIH 137

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP} Length = 148

 Score = 85.3 bits (211), Expect = 6e-21
 Identities = 28/118 (23%), Positives = 43/118 (36%), Gaps = 5/118 (4%)

Query: 8   VGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIG 67
             D DR   FY +  G  +    +IP+  Y+    G   E          N G+ +    
Sbjct: 33  FDDGDRARAFYRDAFGWAI---AEIPDMDYSMVTTGPVGESGMPDEPGYINGGMMQRGEV 89

Query: 68  TGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG 125
           T      + V+ +   +E I++ GGK      PV G     A+  D +G    L E  
Sbjct: 90  TTPVVT-VDVESIESALERIESLGGKTVTGRTPV-GNMGFAAYFTDSEGNVVGLWETA 145

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP} Length = 148

 Score = 76.9 bits (189), Expect = 8e-18
 Identities = 22/120 (18%), Positives = 40/120 (33%), Gaps = 5/120 (4%)

Query: 127 TPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELT 186
               +    +   D DR+  FY  AFG  +    + P+  Y++   G   E         
Sbjct: 22  MTGRIVHFEIPFDDGDRARAFYRDAFGWAI---AEIPDMDYSMVTTGPVGESGMPDEPGY 78

Query: 187 YNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDG 246
            N G+    +      + +  + +    E I+  GGK      P+  +        D +G
Sbjct: 79  INGGMMQRGEVTT-PVVTVDVESIESALERIESLGGKTVTGRTPVGNM-GFAAYFTDSEG 136

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 84.8 bits (210), Expect = 1e-20
 Identities = 25/132 (18%), Positives = 39/132 (29%), Gaps = 14/132 (10%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFV----IELT 56
           ++       DLD    FY +  G++++ K           F   G +             
Sbjct: 9   IMETALYADDLDAAEAFYRDVFGLEMVLKLP-----GQLVFFKCGRQMLLLFDPQESSRA 63

Query: 57  YNYGVDKYDIGTGFGHFGIAVD---DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIED 113
                       G GHF    D   +V +     +A    V        G  +V  +I D
Sbjct: 64  DANNPIPRHGAVGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHRWPNGSYSV--YIRD 121

Query: 114 PDGYKFELLERG 125
           P G   E+ E  
Sbjct: 122 PAGNSVEVGEGK 133

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 50.2 bits (120), Expect = 5e-08
 Identities = 18/118 (15%), Positives = 29/118 (24%), Gaps = 10/118 (8%)

Query: 134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVV----LELTYNY 189
             L   DLD +  FY   FG+E++ K         +     G +   +            
Sbjct: 12  TALYADDLDAAEAFYRDVFGLEMVLKLP-----GQLVFFKCGRQMLLLFDPQESSRADAN 66

Query: 190 GVTDYDKGNAYAQIAIGTDDVYKTAEAIK-LFGGKVTREPGPLPGINTKITACLDPDG 246
                             DD  +  E        ++  E        +      DP G
Sbjct: 67  NPIPRHGAVGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHRWPNGSYSVYIRDPAG 124

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 83.4 bits (206), Expect = 2e-20
 Identities = 28/128 (21%), Positives = 45/128 (35%), Gaps = 12/128 (9%)

Query: 2   LHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGV 61
           + +    G LD  I+FY E L +K + +       Y     G     + + +E T   G 
Sbjct: 13  IRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNG-YDGVMFGLP--HADYHLEFTQYEGG 69

Query: 62  DKYDIGTGFGHFGIAVDD---VAKTVELIKAKGGKVTREPGP--VKGGNTVIAFIEDPDG 116
               +          V +   +A     +K  G +      P    GG T    IEDPDG
Sbjct: 70  STAPVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVT----IEDPDG 125

Query: 117 YKFELLER 124
           ++   +  
Sbjct: 126 WRIVFMNS 133

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 70.3 bits (172), Expect = 2e-15
 Identities = 24/118 (20%), Positives = 39/118 (33%), Gaps = 8/118 (6%)

Query: 137 RVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDK 196
             G LD  I FYE+   ++ + +       Y   M G      +  LE T   G +    
Sbjct: 18  PTGQLDEIIRFYEEGLCLKRIGEFSQH-NGYDGVMFGLP--HADYHLEFTQYEGGSTAPV 74

Query: 197 GNAYAQIAI---GTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVF 251
            +  + +        ++      +K  G +      P            DPDGW+ VF
Sbjct: 75  PHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIE--DPDGWRIVF 130

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score = 77.6 bits (191), Expect = 3e-18
 Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 12/123 (9%)

Query: 2   LHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGV 61
           + V   VG  +    FY E +GM+ + K +   +K    +   G ++ H  +E  +N   
Sbjct: 14  VQVAAPVGCEEEARAFYGETIGMEEIPKPE-ELKKRGGCWFKCGNQEIHIGVEQNFNPA- 71

Query: 62  DKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 121
                     H    V  + +  + +  +G +V  +            ++ DP G + E 
Sbjct: 72  -------KRAHPAFYVLKIDEFKQELIKQGIEVIDDH-ARPDVIRF--YVSDPFGNRIEF 121

Query: 122 LER 124
           +E 
Sbjct: 122 MEN 124

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score = 51.4 bits (123), Expect = 1e-08
 Identities = 21/114 (18%), Positives = 37/114 (32%), Gaps = 12/114 (10%)

Query: 133 QVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVT 192
           QV   VG  + +  FY +  GME + K +  + +          E     + +    GV 
Sbjct: 15  QVAAPVGCEEEARAFYGETIGMEEIPKPEELKKRGGCWFKCGNQE-----IHI----GVE 65

Query: 193 DYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDG 246
                   A  A     + +  + +   G +V  +    P +        DP G
Sbjct: 66  QNFNPAKRAHPAFYVLKIDEFKQELIKQGIEVIDDH-ARPDV--IRFYVSDPFG 116

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 75.7 bits (186), Expect = 2e-17
 Identities = 24/120 (20%), Positives = 38/120 (31%), Gaps = 8/120 (6%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPE-EKYTNAFLGYGPEDSHFVIELTYNYGV 61
           H+ + V DL+R  +        + +   D  +       F   G       I +    G 
Sbjct: 7   HMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD------IWVAIMQGE 60

Query: 62  DKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 121
              +       F I   D  +  E +   G  +      V+G    I F  D D + FEL
Sbjct: 61  KLAERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYF-YDDDNHMFEL 119

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 53.0 bits (127), Expect = 4e-09
 Identities = 19/114 (16%), Positives = 33/114 (28%), Gaps = 8/114 (7%)

Query: 134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYK-YTIAMMGYGPEDKNVVLELTYNYGVT 192
           +   V DL+R     E  F    +   D  ++          G       + +    G  
Sbjct: 8   MTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD------IWVAIMQGEK 61

Query: 193 DYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDG 246
             ++   +    I   D  + AE +   G  + R P P      +     D D 
Sbjct: 62  LAERSYNHIAFKIDDADFDRYAERVGKLGLDM-RPPRPRVEGEGRSIYFYDDDN 114

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score = 75.8 bits (187), Expect = 2e-17
 Identities = 25/123 (20%), Positives = 48/123 (39%), Gaps = 19/123 (15%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
            V  +V +L+++ +FYTE LG +          ++   ++  G      + E   N+   
Sbjct: 31  EVAVKVKNLEKSSQFYTEILGFEAGLL--DSARRWNFLWVS-GRAGMVVLQEEKENWQQQ 87

Query: 63  KYDIGTGFGHFGIAVD--DVAKTVELIKAKGGKVTREPGPVKGGNTVIA--FIEDPDGYK 118
                    HF   V+  ++    + +++KG  V    GPV          +  DP+G+ 
Sbjct: 88  ---------HFSFRVEKSEIEPLKKALESKGVSVH---GPVNQEWMQAVSLYFADPNGHA 135

Query: 119 FEL 121
            E 
Sbjct: 136 LEF 138

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score = 41.5 bits (98), Expect = 4e-05
 Identities = 19/116 (16%), Positives = 38/116 (32%), Gaps = 17/116 (14%)

Query: 134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD 193
           V ++V +L++S  FY +  G E         +             +  ++ L        
Sbjct: 32  VAVKVKNLEKSSQFYTEILGFEAGLLDSARRW------NFLWVSGRAGMVVL-------Q 78

Query: 194 YDKGNAYAQ-IAIG--TDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDG 246
            +K N   Q  +      ++    +A++  G  V   P     +        DP+G
Sbjct: 79  EEKENWQQQHFSFRVEKSEIEPLKKALESKGVSV-HGPVNQEWMQAVSLYFADPNG 133

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 74.7 bits (183), Expect = 7e-17
 Identities = 26/121 (21%), Positives = 39/121 (32%), Gaps = 8/121 (6%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           H+V  V D+  TI+FY E LG   +  +           L +G +  +   +        
Sbjct: 26  HLVLTVSDISTTIRFYEEVLGFSAVTFKQ------NRKALIFGAQKINLHQQEMEFEPKA 79

Query: 63  KYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIA--FIEDPDGYKFE 120
                       I    +   V  I   G  +   P    G    I   +I DPDG   E
Sbjct: 80  SRPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIE 139

Query: 121 L 121
           +
Sbjct: 140 I 140

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 52.7 bits (126), Expect = 5e-09
 Identities = 21/115 (18%), Positives = 40/115 (34%), Gaps = 8/115 (6%)

Query: 134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD 193
           ++L V D+  +I FYE+  G   +  + N +       + +G +  N+  +         
Sbjct: 27  LVLTVSDISTTIRFYEEVLGFSAVTFKQNRKA------LIFGAQKINLHQQEMEFEPKAS 80

Query: 194 YDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITA--CLDPDG 246
                +     I +  +      I   G  +   P    G   +I +    DPDG
Sbjct: 81  RPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDG 135

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 73.8 bits (181), Expect = 1e-16
 Identities = 28/129 (21%), Positives = 43/129 (33%), Gaps = 13/129 (10%)

Query: 1   ML-HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY 59
           ML HV   V  L+ +I F+   LG                    Y    ++ V   T + 
Sbjct: 20  MLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSR-----GKSYKHGKTYLVFVQTEDR 74

Query: 60  GVD--KYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTREPG--PVKGGNTVIAFIE 112
                 +   TG  H        + V +  + +K +G  +  E       G N    F E
Sbjct: 75  FQTPTFHRKRTGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCE 134

Query: 113 DPDGYKFEL 121
           DP+  K E+
Sbjct: 135 DPNRIKVEI 143

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 48.3 bits (115), Expect = 2e-07
 Identities = 19/120 (15%), Positives = 33/120 (27%), Gaps = 12/120 (10%)

Query: 134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD 193
           V + V  L+ SI F++   G        +           Y      +V   T +   T 
Sbjct: 24  VEINVDHLEESIAFWDWLLGELGYEDYQSWSR-----GKSYKHGKTYLVFVQTEDRFQTP 78

Query: 194 YDKGNA--YAQIAI---GTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITAC--LDPDG 246
                      +A      + V +  + +K  G  +  E            A    DP+ 
Sbjct: 79  TFHRKRTGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNR 138

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 72.8 bits (179), Expect = 2e-16
 Identities = 29/130 (22%), Positives = 40/130 (30%), Gaps = 14/130 (10%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTY--NYG 60
           HV   V DLD + ++YTE L  K L +              +G       I L      G
Sbjct: 8   HVSLTVRDLDISCRWYTEILDWKELVRGRGDT-----TSFAHGVLPGGLSIVLREHDGGG 62

Query: 61  VDKYDIGT-GFGHFGIAV---DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDG 116
            D +D    G  H   +V    D+    E +   G   T      +     I    D D 
Sbjct: 63  TDLFDETRPGLDHLSFSVESMTDLDVLEERLAKAGAAFT---PTQELPFGWILAFRDADN 119

Query: 117 YKFELLERGP 126
              E +    
Sbjct: 120 IALEAMLGRE 129

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 45.1 bits (107), Expect = 2e-06
 Identities = 10/42 (23%), Positives = 17/42 (40%)

Query: 134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYG 175
           V L V DLD S  +Y +    + L +       +   ++  G
Sbjct: 9   VSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLPGG 50

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 72.1 bits (177), Expect = 4e-16
 Identities = 29/120 (24%), Positives = 48/120 (40%), Gaps = 13/120 (10%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG-V 61
           H+   V DL +++ F+ E LG+ L  + +      T A+L  G  D    +        V
Sbjct: 7   HLTLAVSDLQKSVTFWHELLGLTLHARWN------TGAYLTCG--DLWVCLSYDEARQYV 58

Query: 62  DKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 121
              +       F +A +D     + ++  G  VT        G +   +  DPDG+K EL
Sbjct: 59  PPQESDYTHYAFTVAEEDFEPLSQRLEQAG--VTIWKQNKSEGASF--YFLDPDGHKLEL 114

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 39.4 bits (92), Expect = 2e-04
 Identities = 8/29 (27%), Positives = 16/29 (55%)

Query: 134 VMLRVGDLDRSINFYEQAFGMELLRKRDN 162
           + L V DL +S+ F+ +  G+ L  + + 
Sbjct: 8   LTLAVSDLQKSVTFWHELLGLTLHARWNT 36

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 70.9 bits (174), Expect = 7e-16
 Identities = 26/123 (21%), Positives = 41/123 (33%), Gaps = 19/123 (15%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           H+   V D+    +F  +  G+     R        NAF      D  F++ L     V 
Sbjct: 6   HLNLTVADVVAAREFLEKYFGLTCSGTRG-------NAFAVMRDND-GFILTLMKGKEVQ 57

Query: 63  KYDIGTGFGHFGIAVDD---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 119
                    H G   +    V K  + +K  G     EP       T   ++E P G+  
Sbjct: 58  Y----PKTFHVGFPQESEEQVDKINQRLKEDG--FLVEPPKHAHAYTF--YVEAPGGFTI 109

Query: 120 ELL 122
           E++
Sbjct: 110 EVM 112

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 47.0 bits (112), Expect = 3e-07
 Identities = 22/115 (19%), Positives = 35/115 (30%), Gaps = 13/115 (11%)

Query: 134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD 193
           + L V D+  +  F E+ FG+     R N              ++   +L L     V  
Sbjct: 7   LNLTVADVVAAREFLEKYFGLTCSGTRGNA--------FAVMRDNDGFILTLMKGKEV-Q 57

Query: 194 YDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWK 248
           Y K           + V K  + +K  G  V     P    +        P G+ 
Sbjct: 58  YPKTFHVGFPQESEEQVDKINQRLKEDGFLV----EPPKHAHAYTFYVEAPGGFT 108

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 70.2 bits (172), Expect = 2e-15
 Identities = 22/119 (18%), Positives = 45/119 (37%), Gaps = 6/119 (5%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           H+   V DL++T  F       + +      ++ ++ +   +    +   I +     + 
Sbjct: 7   HITLIVKDLNKTTAFLQNIFNAEEI--YSSGDKTFSLSKEKFF-LIAGLWICIMEGDSLQ 63

Query: 63  KYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 121
           +         F I  ++V +  E IKA G ++ +   P   G     +  D D + FEL
Sbjct: 64  E--RTYNHIAFQIQSEEVDEYTERIKALGVEM-KPERPRVQGEGRSIYFYDFDNHLFEL 119

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 47.5 bits (113), Expect = 3e-07
 Identities = 18/114 (15%), Positives = 39/114 (34%), Gaps = 8/114 (7%)

Query: 134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYK-YTIAMMGYGPEDKNVVLELTYNYGVT 192
           + L V DL+++  F +  F  E +    +  +                  L +    G +
Sbjct: 8   ITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIAG------LWICIMEGDS 61

Query: 193 DYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDG 246
             ++   +    I +++V +  E IK  G ++ +   P      +     D D 
Sbjct: 62  LQERTYNHIAFQIQSEEVDEYTERIKALGVEM-KPERPRVQGEGRSIYFYDFDN 114

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3 Length = 418

 Score = 73.1 bits (178), Expect = 5e-15
 Identities = 41/281 (14%), Positives = 76/281 (27%), Gaps = 51/281 (18%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           HV     D       ++  LG  L  + D+      +A L        F+    Y +G D
Sbjct: 34  HVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGAD 93

Query: 63  KYDI-----------------GTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKG-- 103
                                G       + V D         A G +    P  +    
Sbjct: 94  AATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGF 153

Query: 104 --------GNTVIAFIEDPDGY-------KFELLERGPTPEP----LCQVMLRVGDLDRS 144
                   G+ V+ ++  PDG         FE +      +        ++  V +L  +
Sbjct: 154 RLAEVELYGDVVLRYVSYPDGAAGEPFLPGFEGVASPGAADYGLSRFDHIVGNVPELAPA 213

Query: 145 INFYEQAFGMELLRKRDNPEYKYT-IAMMGYGPEDKNVVLELTYNYGVT----------- 192
             ++    G     +    +       +      + +  + L  N  V            
Sbjct: 214 AAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQTF 273

Query: 193 -DYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLP 232
            D+  G     +A+ +DDV +T   ++        E    P
Sbjct: 274 LDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP 314

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A Length = 148

 Score = 69.3 bits (169), Expect = 5e-15
 Identities = 27/134 (20%), Positives = 49/134 (36%), Gaps = 14/134 (10%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFL--GYGPEDSHFVIELTYNYG 60
           HV Y   D D   K+Y E  G   L + + PE+      +       +    +++     
Sbjct: 12  HVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLN 71

Query: 61  --------VDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKG-GNTVIAFI 111
                   + K++   G  H    VDD+      ++ +G ++  +  P  G G   I F+
Sbjct: 72  DESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDE-PKLGTGGNRINFM 130

Query: 112 --EDPDGYKFELLE 123
             +   G   EL +
Sbjct: 131 HPKSGKGVLIELTQ 144

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A Length = 148

 Score = 45.0 bits (106), Expect = 3e-06
 Identities = 20/135 (14%), Positives = 43/135 (31%), Gaps = 21/135 (15%)

Query: 133 QVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMM--GYGPEDKNVVLELTYNYG 190
            V     D D +  +Y++ FG   L + +NPE      MM       +    +++     
Sbjct: 12  HVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLN 71

Query: 191 --------VTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACL 242
                   +  ++       +A   DD+   +  ++  G ++  +  P  G         
Sbjct: 72  DESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDE-PKLG--------- 121

Query: 243 DPDGWKTVFVDNVDF 257
              G +  F+     
Sbjct: 122 -TGGNRINFMHPKSG 135

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 72.4 bits (177), Expect = 5e-15
 Identities = 32/197 (16%), Positives = 58/197 (29%), Gaps = 29/197 (14%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY--G 60
           H+     + +    FY   LG++ ++     ++      L YG +      EL++     
Sbjct: 33  HISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMY-HLFYGDKTGSPGTELSFFEIPL 91

Query: 61  VDKYDIGTG-FGHFGIAVDDVA---KTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDG 116
           V +   GT      G+ V          E  +     V             + F ED +G
Sbjct: 92  VGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFD--VKHSEMTTYANRPALQF-EDAEG 148

Query: 117 YKFELLERGPTPEPLCQ------------------VMLRVGDLDRSINFYEQAFGMELLR 158
            +  LL          +                  V L V  LD+  +   + FG   + 
Sbjct: 149 LRLVLLVSNGEKVEHWETWEKSEVPAKHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVS 208

Query: 159 KRDNPEYKYTIAMMGYG 175
            R++ E  +        
Sbjct: 209 -RNDQEAIFQSIKGEAF 224

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100} Length = 128

 Score = 68.1 bits (166), Expect = 9e-15
 Identities = 26/124 (20%), Positives = 43/124 (34%), Gaps = 12/124 (9%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
           +  +      L   + FY   +G +    +     +   A          F +   Y+  
Sbjct: 7   ITSITINTSHLQGMLGFY-RIIGFQFTASKVDKGSEVHRAVHN----GVEFSL---YSIQ 58

Query: 61  VDKYDIGTGFGHFGIAVDDVAKTV-ELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 119
             +          G  + D+ KTV EL+K  G     +P  +  G    A + DPDG+  
Sbjct: 59  NPQRSQIPSL-QLGFQITDLEKTVQELVKIPGAMCILDPTDMPDGKK--AIVLDPDGHSI 115

Query: 120 ELLE 123
           EL E
Sbjct: 116 ELCE 119

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100} Length = 128

 Score = 52.3 bits (125), Expect = 6e-09
 Identities = 22/115 (19%), Positives = 36/115 (31%), Gaps = 12/115 (10%)

Query: 133 QVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVT 192
            + +    L   + FY    G +    + +   +   A+         V   L       
Sbjct: 9   SITINTSHLQGMLGFYR-IIGFQFTASKVDKGSEVHRAVHN------GVEFSLYSIQ--N 59

Query: 193 DYDKGNAYAQIAIGTDDVYKT-AEAIKLFGGKVTREPGPLPGINTKITACLDPDG 246
                    Q+     D+ KT  E +K+ G     +P  +P     I   LDPDG
Sbjct: 60  PQRSQIPSLQLGFQITDLEKTVQELVKIPGAMCILDPTDMPDGKKAI--VLDPDG 112

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 67.9 bits (166), Expect = 1e-14
 Identities = 31/119 (26%), Positives = 46/119 (38%), Gaps = 14/119 (11%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           H+   V DL  +I FY + LG +L  + D        A+L  G       +     YG  
Sbjct: 7   HLTLAVADLPASIAFYRDLLGFRLEARWD------QGAYLELG--SLWLCLSREPQYGGP 58

Query: 63  KYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 121
                     FGIA  D A+    ++A G  V         G++   +  DPDG++ E 
Sbjct: 59  A--ADYTHYAFGIAAADFARFAAQLRAHG--VREWKQNRSEGDSF--YFLDPDGHRLEA 111

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 40.2 bits (94), Expect = 1e-04
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 134 VMLRVGDLDRSINFYEQAFGMELLRKRDN 162
           + L V DL  SI FY    G  L  + D 
Sbjct: 8   LTLAVADLPASIAFYRDLLGFRLEARWDQ 36

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 70.6 bits (173), Expect = 2e-14
 Identities = 35/207 (16%), Positives = 66/207 (31%), Gaps = 39/207 (18%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           HV  RV D+ + ++ Y E LG+  + + D         +L    E   F + L       
Sbjct: 10  HVQLRVLDMSKALEHYVELLGLIEMDRDDQ-----GRVYLKAWTEVDKFSLVLR------ 58

Query: 63  KYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTREP-GPVKGGNTVIAFIEDPDGYK 118
           + D   G    G  V   D + +    + A G  V + P G +      + F + P G+ 
Sbjct: 59  EAD-EPGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRF-QAPSGHH 116

Query: 119 FEL----------------------LERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMEL 156
           FEL                        +G         ++   +L  + + + +  G  L
Sbjct: 117 FELYADKEYTGKWGLNDVNPEAWPRDLKGMAAVRFDHALMYGDELPATYDLFTKVLGFYL 176

Query: 157 LRKRDNPEYKYTIAMMGYGPEDKNVVL 183
             +  +         +    +  +V  
Sbjct: 177 AEQVLDENGTRVAQFLSLSTKAHDVAF 203

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 49.5 bits (118), Expect = 3e-07
 Identities = 18/125 (14%), Positives = 37/125 (29%), Gaps = 17/125 (13%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDI---PEEKYTNAFLGYGPEDSHFVIELTYNY 59
           H +    +L  T   +T+ LG  L    +            FL    +         ++ 
Sbjct: 153 HALMYGDELPATYDLFTKVLGFYL---AEQVLDENGTRVAQFLSLSTK--------AHDV 201

Query: 60  GVDKYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDG 116
               +       H    +   +D+ +  +LI      +   P      +    +  DP G
Sbjct: 202 AFIHHPEKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSG 261

Query: 117 YKFEL 121
            + E+
Sbjct: 262 NRNEV 266

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 67.6 bits (165), Expect = 2e-14
 Identities = 24/124 (19%), Positives = 44/124 (35%), Gaps = 7/124 (5%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
            ++ +  V D++R+  FY + LG+K+L         +     G+   +   + E  +   
Sbjct: 9   FVNPIPFVRDINRSKSFYRDRLGLKILED----FGSFVLFETGFAIHEGRSLEETIWRTS 64

Query: 61  VDKYDI-GTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 119
            D  +  G           DV    + I     ++         G  V     DPDG+  
Sbjct: 65  SDAQEAYGRRNMLLYFEHADVDAAFQDIA-PHVELIHPLERQAWGQRVF-RFYDPDGHAI 122

Query: 120 ELLE 123
           E+ E
Sbjct: 123 EVGE 126

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 58.0 bits (140), Expect = 6e-11
 Identities = 18/117 (15%), Positives = 36/117 (30%), Gaps = 7/117 (5%)

Query: 131 LCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYK-YTIAMMGYGPEDKNVVLELTYNY 189
               +  V D++RS +FY    G+++L   D   +  +      +        +  T + 
Sbjct: 9   FVNPIPFVRDINRSKSFYRDRLGLKIL--EDFGSFVLFETGFAIHEGRSLEETIWRTSS- 65

Query: 190 GVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDG 246
                  G     +     DV    + I     ++            ++    DPDG
Sbjct: 66  -DAQEAYGRRNMLLYFEHADVDAAFQDIAP-HVELIHPLERQAW-GQRVFRFYDPDG 119

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 65.3 bits (159), Expect = 1e-13
 Identities = 20/125 (16%), Positives = 43/125 (34%), Gaps = 12/125 (9%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYT---NAFLGYGPEDSHFVIELTYNY 59
           +V     D+     FY +  G + +     P  +      + +G+   +++ +++L    
Sbjct: 11  YVNIFTRDIVAMSAFYQQVFGFQEIESIRSPIFRGLDTGKSCIGFNAHEAYELMQLA--- 67

Query: 60  GVDKYDIGTGFGHFGIAVD---DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDG 116
                +           VD    V K V +  A G  + + P      +   A + DP+ 
Sbjct: 68  --QFSETSGIKFLLNFDVDTKEAVDKLVPVAIAAGATLIKAPYET-YYHWYQAVLLDPER 124

Query: 117 YKFEL 121
             F +
Sbjct: 125 NVFRI 129

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 55.3 bits (133), Expect = 5e-10
 Identities = 18/114 (15%), Positives = 36/114 (31%), Gaps = 2/114 (1%)

Query: 134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD 193
           V +   D+     FY+Q FG + +    +P ++           + +   EL      ++
Sbjct: 12  VNIFTRDIVAMSAFYQQVFGFQEIESIRSPIFRGLDTGKSCIGFNAHEAYELMQLAQFSE 71

Query: 194 YDKGNAYAQIAIGT-DDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDG 246
                      + T + V K        G  + + P      +      LDP+ 
Sbjct: 72  TSGIKFLLNFDVDTKEAVDKLVPVAIAAGATLIKAPYETYY-HWYQAVLLDPER 124

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii} Length = 339

 Score = 68.5 bits (167), Expect = 1e-13
 Identities = 24/181 (13%), Positives = 53/181 (29%), Gaps = 42/181 (23%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
                      T+ F+T+ LGM +  +         + +L    +   + +++T      
Sbjct: 14  RAELFSPKPQETLDFFTKFLGMYVTHREG------QSVYLRGYEDPYPWSLKIT------ 61

Query: 63  KYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 119
                 G GH  +     + + +  + +       T        G T     + PDG+  
Sbjct: 62  -EAPEAGMGHAAMRTSSPEALERRAKSLTDGNVDGTWSEDQFGYGKTF--EYQSPDGHNL 118

Query: 120 ELL------------------------ERGPTPEPLCQVMLRVGDLDRSINFYEQAFGME 155
           +LL                         +G   + +  + L   D+    + +E+  G  
Sbjct: 119 QLLWEAEKYVAPPELRSKILTRPSKKPLQGIPVKRIDHLNLMSSDVTAVKDSFERHLGFR 178

Query: 156 L 156
            
Sbjct: 179 T 179

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp} Length = 135

 Score = 64.0 bits (155), Expect = 3e-13
 Identities = 22/122 (18%), Positives = 32/122 (26%), Gaps = 11/122 (9%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           H+     DLD    FY   LG KL R+            +         V  L+  +  +
Sbjct: 12  HLAIPARDLDEAYDFYVTKLGCKLARRYP--------DRITLDFFGDQLVCHLSDRWDRE 63

Query: 63  KYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREP---GPVKGGNTVIAFIEDPDGYKF 119
                  FG             +L K +G     +               F+ DP     
Sbjct: 64  VSMYPRHFGITFRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLL 123

Query: 120 EL 121
           E 
Sbjct: 124 EF 125

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp} Length = 135

 Score = 42.0 bits (98), Expect = 3e-05
 Identities = 16/116 (13%), Positives = 33/116 (28%), Gaps = 11/116 (9%)

Query: 134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD 193
           + +   DLD + +FY    G +L R+  +      I +  +G +    V  L+  +    
Sbjct: 13  LAIPARDLDEAYDFYVTKLGCKLARRYPDR-----ITLDFFGDQL---VCHLSDRWDREV 64

Query: 194 YDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREP---GPLPGINTKITACLDPDG 246
                 +              +  K  G     +            +    +DP  
Sbjct: 65  SMYPRHFGITFRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSN 120

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A* Length = 252

 Score = 66.2 bits (161), Expect = 5e-13
 Identities = 28/178 (15%), Positives = 55/178 (30%), Gaps = 28/178 (15%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
            +     +LDR + FYT  LG + + ++           +  G   S        +    
Sbjct: 29  QLTLYTAELDRMLAFYTNMLGAQHVHEQA------DAFTIQLG--VSQIQFRAAADGTKP 80

Query: 63  KYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIA---FIEDPDGYKF 119
            Y I        IA +   +    +   G  +T             A   ++EDP G   
Sbjct: 81  FYHIA-----INIAANHFQEGKAWLSGFGELLTENDEDQAYFPFFNAYSCYVEDPSGNII 135

Query: 120 ELLERGPTPEP------------LCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEY 165
           EL+ R                  + ++ +   D++++    +QA     L + +    
Sbjct: 136 ELISRQQAAPVLDKPFSADQLLSIGEINITTSDVEQAATRLKQAELPVKLDQIEPAGL 193

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi} Length = 150

 Score = 63.9 bits (155), Expect = 5e-13
 Identities = 25/122 (20%), Positives = 50/122 (40%), Gaps = 9/122 (7%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIE-LTYNYGV 61
            +   +GDL+ + +FY E  G   + +           +   G   + ++++ L  + GV
Sbjct: 8   VITLGIGDLEASARFYGEGFGWAPVFRNPEII-----FYQMNGFVLATWLVQNLQEDVGV 62

Query: 62  DKYDIGTGF--GHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 119
                       H   A  +VA  +E + A GG++ R          +  ++ DPDG+ +
Sbjct: 63  AVTSRPGSMALAHNVRAETEVAPLMERLVAAGGQLLRPADAP-PHGGLRGYVADPDGHIW 121

Query: 120 EL 121
           E+
Sbjct: 122 EI 123

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi} Length = 150

 Score = 53.5 bits (128), Expect = 3e-09
 Identities = 24/115 (20%), Positives = 41/115 (35%), Gaps = 7/115 (6%)

Query: 134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYT--IAMMGYGPEDKNVVLELTYNYGV 191
           + L +GDL+ S  FY + FG   + +     +       +  +  ++    L+      V
Sbjct: 9   ITLGIGDLEASARFYGEGFGWAPVFRNPEIIFYQMNGFVLATWLVQN----LQEDVGVAV 64

Query: 192 TDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDG 246
           T      A A       +V    E +   GG++ R     P    +     DPDG
Sbjct: 65  TSRPGSMALAHNVRAETEVAPLMERLVAAGGQLLRPADAPPHGGLRGYV-ADPDG 118

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A* Length = 393

 Score = 67.2 bits (163), Expect = 5e-13
 Identities = 44/274 (16%), Positives = 81/274 (29%), Gaps = 46/274 (16%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN---- 58
            V + VG+  +   FY   +G + L  R +                  FV+    N    
Sbjct: 14  SVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQGKIVFVLSSALNPWNK 73

Query: 59  -YGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVK--GGNTVIAFIEDPD 115
             G      G G       V+D    V+  + +G K+ REP   +   G    A ++   
Sbjct: 74  EMGDHLVKHGDGVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYG 133

Query: 116 GYKFELLERG-----------------PTPEPLCQVMLRV----------GDLDRSINFY 148
                L+E+                  P    L +  L +           ++  +  +Y
Sbjct: 134 DTTHTLVEKMNYIGQFLPGYEAPAFMDPLLPKLPKCSLEMIDHIVGNQPDQEMVSASEWY 193

Query: 149 EQAFGMELLRKRDNPEYK------YTIAMMGYGPEDKNVVLELTYNYGVT------DYDK 196
            +          D+ +         +I +  Y    K  + E       +      DY+ 
Sbjct: 194 LKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGKKKSQIQEYVDYNG 253

Query: 197 GNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGP 230
           G     IA+ T+D+      ++  G +    P  
Sbjct: 254 GAGVQHIALKTEDIITAIRHLRERGLEFLSVPST 287

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans} Length = 310

 Score = 66.4 bits (162), Expect = 6e-13
 Identities = 37/172 (21%), Positives = 60/172 (34%), Gaps = 33/172 (19%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFL-GYGPEDSHFVIELTYNYGV 61
           +V Y V D D    FY +  G++ + +         NA+    G  D H V++L      
Sbjct: 11  YVGYGVKDFDAEKAFYADVWGLEPVGEDA------NNAWFKAQG-ADEHHVVQLR----- 58

Query: 62  DKYDIGTGFGHFGIAVDD---VAKTVELIKAKGGKVTREPGPV--KGGNTVIAFIEDPDG 116
            + D         +A D    V      ++A G KV  EP  +   GG     F   PDG
Sbjct: 59  -RAD-ENRIDVIALAADSRSDVDALRASVEAAGCKVASEPAVLATPGGGYGFRF-FSPDG 115

Query: 117 YKFEL------------LERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMEL 156
             FE+                  P  +  ++L   +    + F+    G ++
Sbjct: 116 LLFEVSSDVAKGAKRDLARWEGVPVKISHIVLHSPNHQDMVKFFTDVLGFKV 167

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A* Length = 309

 Score = 66.0 bits (161), Expect = 7e-13
 Identities = 37/209 (17%), Positives = 60/209 (28%), Gaps = 42/209 (20%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFL-GYGPEDSHFVIELTYNYGV 61
           H   RV +L+  I FY   LG+          +     +   +   D    I       +
Sbjct: 11  HAQVRVLNLEEGIHFYRNVLGLVE-----TGRDDQGRVYFKCWDERDHSCYI-------I 58

Query: 62  DKYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTREP-GPVKGGNTVIAFIEDPDGY 117
            + D   G   FG  V     + K    ++A G   TR P G +      + F E P G+
Sbjct: 59  READ-TAGIDFFGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRF-ELPSGH 116

Query: 118 KFEL----------------------LERGPTPEPLCQVMLRVGDLDRSINFYEQAFGME 155
             EL                       E G  P  L   +L   ++      + +  G  
Sbjct: 117 LIELYAEKTCVGNGISEVNPAPWNAQREHGIAPIQLDHCLLYGPNIAEVQKIFTEVLGFY 176

Query: 156 L-LRKRDNPEYKYTIAMMGYGPEDKNVVL 183
           L  R             +    +  ++  
Sbjct: 177 LVERVLSPDGDSDMGIWLSCSHKVHDIAF 205

>3eck_A Protein (homoprotocatechuate 2,3-dioxygenase); oxidoreductase, extradiol, FEII, crystal packing; HET: XXG; 1.60A {Brevibacterium fuscum} SCOP: d.32.1.3 d.32.1.3 PDB: 3ecj_A* 3ojn_A* 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* Length = 365

 Score = 65.8 bits (160), Expect = 1e-12
 Identities = 46/266 (17%), Positives = 76/266 (28%), Gaps = 42/266 (15%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           +    V DL ++  FY + LG+ +  + +         +L    E  H  + LT      
Sbjct: 20  YAELVVTDLAKSRNFYVDVLGLHVSYEDE------NQIYLRSFEEFIHHNLVLT------ 67

Query: 63  KYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTR-EPGPVKGGNTVIAFIEDPDGYK 118
           K             V   +DV K     +  G +  R + G VKG    +   EDP G+ 
Sbjct: 68  KGP-VAALKAMAFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRV-EDPLGFP 125

Query: 119 FEL---------------LERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNP 163
           +E                L        L        D+ R   + E   G  +     + 
Sbjct: 126 YEFFFETTHVERLHMRYDLYSAGELVRLDHFNQVTPDVPRGRKYLED-LGFRVTEDIQDD 184

Query: 164 EYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGK 223
           E     A M       +  L       +      +  A       ++ +  + +      
Sbjct: 185 EGTTYAAWMHRKGTVHDTALTGGNGPRL------HHVAFSTHEKHNIIQICDKMGALRIS 238

Query: 224 VTREPGPLPGINTKITA--CLDPDGW 247
              E GP     +       LDPD  
Sbjct: 239 DRIERGPGRHGVSNAFYLYILDPDNH 264

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A Length = 323

 Score = 65.4 bits (159), Expect = 2e-12
 Identities = 42/266 (15%), Positives = 74/266 (27%), Gaps = 42/266 (15%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           ++   V DL ++ +FY + LG+ +  + +         +L    E  H  + L       
Sbjct: 20  YMEIVVTDLAKSREFYVDVLGLHVTEEDE------NTIYLRSLEEFIHHNLVLR------ 67

Query: 63  KYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTREPGP-VKGGNTVIAFIEDPDGYK 118
           +         F   V    +V       K  G +  R      KG    +   EDP G+ 
Sbjct: 68  QGP-IAAVAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRV-EDPLGFP 125

Query: 119 FEL---------------LERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNP 163
           +E                L        L        D+ R   + E   G  +     + 
Sbjct: 126 YEFFYETEHVERLTQRYDLYSAGELVRLDHFNQVTPDVPRGRAYLE-DLGFRVSEDIKDS 184

Query: 164 EYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGK 223
           +     A M       +  L       +      +  A       ++ +  + +      
Sbjct: 185 DGVTYAAWMHRKQTVHDTALTGGNGPRM------HHVAFATHEKHNIIQICDKMGALRIS 238

Query: 224 VTREPGPLPGINTKITA--CLDPDGW 247
              E GP     +       LDPDG 
Sbjct: 239 DRIERGPGRHGVSNAFYLYILDPDGH 264

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A Length = 323

 Score = 41.5 bits (97), Expect = 1e-04
 Identities = 20/124 (16%), Positives = 40/124 (32%), Gaps = 15/124 (12%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           H      D+ R   +  E LG ++       +     A++          +         
Sbjct: 155 HFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGG------ 207

Query: 63  KYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFI--EDPDGY 117
               G    H   A     ++ +  + + A       E GP + G +   ++   DPDG+
Sbjct: 208 ---NGPRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGH 264

Query: 118 KFEL 121
           + E+
Sbjct: 265 RIEI 268

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 62.4 bits (151), Expect = 2e-12
 Identities = 22/121 (18%), Positives = 45/121 (37%), Gaps = 8/121 (6%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           H+V  V  +  T  FY++ LGM+++  ++          L +G +  +            
Sbjct: 30  HIVMTVKSIKDTTMFYSKILGMEVMTFKE------DRKALCFGDQKFNLHEVGKEFEPKA 83

Query: 63  KYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFE 120
            + +        I    + + ++ +KA    +   P P  G  G  +  +  DPD    E
Sbjct: 84  AHPVPGSLDICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIE 143

Query: 121 L 121
           +
Sbjct: 144 V 144

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 41.6 bits (97), Expect = 4e-05
 Identities = 17/115 (14%), Positives = 40/115 (34%), Gaps = 8/115 (6%)

Query: 134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD 193
           +++ V  +  +  FY +  GME++  +++         + +G +  N+            
Sbjct: 31  IVMTVKSIKDTTMFYSKILGMEVMTFKEDR------KALCFGDQKFNLHEVGKEFEPKAA 84

Query: 194 YDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITA--CLDPDG 246
           +    +     I    + +  + +K     +   P P  G    I +    DPD 
Sbjct: 85  HPVPGSLDICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDR 139

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A* Length = 133

 Score = 61.5 bits (149), Expect = 2e-12
 Identities = 25/122 (20%), Positives = 46/122 (37%), Gaps = 10/122 (8%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           H+V  V D+  T  FY + LGMK +              L +G +  +   +L   +   
Sbjct: 13  HLVLTVADIPTTTNFYEKVLGMKAVSFGA------GRIALEFGHQKINL-HQLGNEFEPK 65

Query: 63  KYDIGTGFGHF-GIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIA--FIEDPDGYKF 119
             ++  G      I    ++  ++ ++ +G  +   P    G    I   +  DPDG   
Sbjct: 66  AQNVRVGSADLCFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLI 125

Query: 120 EL 121
           E+
Sbjct: 126 EV 127

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A* Length = 133

 Score = 40.7 bits (95), Expect = 7e-05
 Identities = 21/115 (18%), Positives = 40/115 (34%), Gaps = 8/115 (6%)

Query: 134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD 193
           ++L V D+  + NFYE+  GM+ +              + +G +  N+            
Sbjct: 14  LVLTVADIPTTTNFYEKVLGMKAVSFGAG------RIALEFGHQKINLHQLGNEFEPKAQ 67

Query: 194 YDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITA--CLDPDG 246
             +  +     I    +    + ++  G  +   P    G    IT+    DPDG
Sbjct: 68  NVRVGSADLCFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDG 122

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A* Length = 297

 Score = 64.1 bits (156), Expect = 3e-12
 Identities = 30/201 (14%), Positives = 57/201 (28%), Gaps = 43/201 (21%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           ++ + V D+     F T+ LG+      D               +   + I +       
Sbjct: 7   YMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRI--DSRAWRIAVQ------ 52

Query: 63  KYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTREPGP---VKGGNTVIAFIEDPDG 116
                      G  V     +A+  + +K  G  VT         +G   +I F  DP G
Sbjct: 53  -QGEVDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITF-ADPFG 110

Query: 117 YKFEL------------------LERGPTPEPLCQVMLRVGDLDRSINFYEQAFGM---E 155
              E+                         + L   +  V D D+++ FY    G    +
Sbjct: 111 LPLEIYYGASEVFEKPFLPGAAVSGFLTGEQGLGHFVRCVPDSDKALAFYTDVLGFQLSD 170

Query: 156 LLRKRDNPEYKYTIAMMGYGP 176
           ++  +  P+       +    
Sbjct: 171 VIDMKMGPDVTVPAYFLHCNE 191

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A* Length = 297

 Score = 40.3 bits (94), Expect = 4e-04
 Identities = 29/127 (22%), Positives = 48/127 (37%), Gaps = 15/127 (11%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKL---LRKRDIPEEKYTNAFLGYGPEDSHFVIELTY 57
           + H V  V D D+ + FYT+ LG +L   +  +  P+      FL       H +     
Sbjct: 143 LGHFVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNE-RHHTL----- 196

Query: 58  NYGVDKYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDP 114
              +  + +     HF + V   DDV    + + A  G +T   G     + V  +   P
Sbjct: 197 --AIAAFPLPKRIHHFMLEVASLDDVGFAFDRVDAD-GLITSTLGRHTNDHMVSFYASTP 253

Query: 115 DGYKFEL 121
            G + E 
Sbjct: 254 SGVEVEY 260

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 64.0 bits (155), Expect = 5e-12
 Identities = 28/179 (15%), Positives = 54/179 (30%), Gaps = 23/179 (12%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAF---LGYGPEDSHFVIELTYNY 59
           H+   VG       FY   LG++L+++    ++  T         G   +          
Sbjct: 11  HITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGA 70

Query: 60  GVDKYDIGT-GFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 118
                  G  G   + +    +A   + ++      T      + G   + F +DP G  
Sbjct: 71  RQGVIGDGQVGVTSYVVPKGAMAFWEKRLEKFNVPYT---KIERFGEQYVEF-DDPHGLH 126

Query: 119 FELLERGPTPEPLCQ---------------VMLRVGDLDRSINFYEQAFGMELLRKRDN 162
            E++ER                          L     D++ +  E   G+E + K  +
Sbjct: 127 LEIVEREEGEANTWTFGEVTPDVAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEGD 185

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 59.4 bits (144), Expect = 2e-11
 Identities = 21/124 (16%), Positives = 37/124 (29%), Gaps = 4/124 (3%)

Query: 7   RVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDI 66
              D DR + +     G +LL ++        +A L  G      ++  T          
Sbjct: 9   AYTDPDRAVDWLVRVFGFRLLLRQP-AIGTIRHADLDTG--GGIVMVRRTGEPYTVSCAG 65

Query: 67  GTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP 126
           G       + V DV +      A G  + +       G      + D +G+ +E      
Sbjct: 66  GHTCKQVIVWVSDVDEHFMRSTAAGADIVQPLQDKPWGLRQ-YLVRDLEGHLWEFTRHLR 124

Query: 127 TPEP 130
              P
Sbjct: 125 DVPP 128

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 51.3 bits (123), Expect = 2e-08
 Identities = 21/113 (18%), Positives = 39/113 (34%), Gaps = 4/113 (3%)

Query: 134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD 193
           V L   D DR++++  + FG  LL ++         A +  G     V++  T       
Sbjct: 6   VELAYTDPDRAVDWLVRVFGFRLLLRQPAIG-TIRHADLDTG--GGIVMVRRTGEPYTVS 62

Query: 194 YDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDG 246
              G+   Q+ +   DV +        G  + +     P    +     D +G
Sbjct: 63  CAGGHTCKQVIVWVSDVDEHFMRSTAAGADIVQPLQDKPWGLRQYL-VRDLEG 114

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2 Length = 119

 Score = 57.8 bits (140), Expect = 4e-11
 Identities = 23/116 (19%), Positives = 34/116 (29%), Gaps = 13/116 (11%)

Query: 7   RVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDI 66
              +  R   FY + LGM +                   P ++H  +      G      
Sbjct: 14  ATPEPARAQAFYGDILGMPVAMDHG------WIVTHA-SPLEAHAQVSFAREGGS----- 61

Query: 67  GTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL 122
           GT      I VD+  +    I   G  +   P     G     F+ DP G    +L
Sbjct: 62  GTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQR-LFLRDPFGKLINIL 116

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2 Length = 119

 Score = 46.3 bits (110), Expect = 6e-07
 Identities = 16/112 (14%), Positives = 31/112 (27%), Gaps = 13/112 (11%)

Query: 135 MLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDY 194
            +   +  R+  FY    GM +    D+             P + +  +         + 
Sbjct: 12  NIATPEPARAQAFYGDILGMPVA--MDHGWI----VTHA-SPLEAHAQVSF-----AREG 59

Query: 195 DKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDG 246
             G     ++I  D+  +    I   G  +   P        +     DP G
Sbjct: 60  GSGTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAW-GVQRLFLRDPFG 110

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A* Length = 138

 Score = 57.2 bits (138), Expect = 1e-10
 Identities = 23/128 (17%), Positives = 42/128 (32%), Gaps = 8/128 (6%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGP----EDSHFVIELTYN 58
                V D+ ++++FY + LG+++    +     +T A L  G     +    V      
Sbjct: 7   LFAVVVEDMAKSLEFYRK-LGVEI--PAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPE 63

Query: 59  YGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 118
           +                    V K    +   G +   +P     G    A ++DPDG  
Sbjct: 64  WQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRY-AIVKDPDGNV 122

Query: 119 FELLERGP 126
            +L    P
Sbjct: 123 VDLFAPLP 130

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A* Length = 138

 Score = 42.5 bits (100), Expect = 2e-05
 Identities = 20/118 (16%), Positives = 37/118 (31%), Gaps = 8/118 (6%)

Query: 133 QVMLRVGDLDRSINFYEQAFGMELLRKRDNPEY----KYTIAMMGYGPEDKNVVLELTYN 188
              + V D+ +S+ FY    G+E+  + D+  +          + +   +   V      
Sbjct: 7   LFAVVVEDMAKSLEFYR-KLGVEIPAEADSAPHTEAVLDGGIRLAWDTVE--TVRSYDPE 63

Query: 189 YGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDG 246
           +         A A     T  V K    +   G +   +P        +     DPDG
Sbjct: 64  WQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVW-GQRYAIVKDPDG 120

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A* Length = 300

 Score = 56.5 bits (136), Expect = 1e-09
 Identities = 23/176 (13%), Positives = 48/176 (27%), Gaps = 37/176 (21%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           ++     D+    ++  + LGM   +            +L      +  V+         
Sbjct: 8   YLRIEATDMAAWREYGLKVLGMVEGKGAP-----EGALYLRMDDFPARLVVV-------- 54

Query: 63  KYDIGTGFGHFGIAVDD---VAKTVELIKAKGGKVTREPG---PVKGGNTVIAFIEDPDG 116
                      G    +   + +    +  +G             +  + +I F  DP G
Sbjct: 55  -PGEHDRLLEAGWECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRF-ADPSG 112

Query: 117 YKFEL-------LERGPTPEP---------LCQVMLRVGDLDRSINFYEQAFGMEL 156
              E+         R  +P           +  V+L   D   +++FY    G  L
Sbjct: 113 NCLEVFHGTALEHRRVVSPYGHRFVTGEQGMGHVVLSTRDDAEALHFYRDVLGFRL 168

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila} Length = 148

 Score = 53.6 bits (128), Expect = 3e-09
 Identities = 23/133 (17%), Positives = 42/133 (31%), Gaps = 15/133 (11%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
            V++ V +  ++ +FY   L  + +      E   T A            + L     ++
Sbjct: 9   LVLFYVKNPAKSEEFYKNLLDTQPI------ESSPTFAMFVMKTG---LRLGLWAQEEIE 59

Query: 63  -KYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 118
            K     G       V   + V +       K   + + P  +  G T      DPD ++
Sbjct: 60  PKAHQTGGGMELSFQVNSNEMVDEIHRQWSDKEISIIQPPTQMDFGYT--FVGVDPDEHR 117

Query: 119 FELLERGPTPEPL 131
             +     T E L
Sbjct: 118 LRIFCLKRTAENL 130

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila} Length = 148

 Score = 40.9 bits (95), Expect = 9e-05
 Identities = 16/118 (13%), Positives = 32/118 (27%), Gaps = 15/118 (12%)

Query: 133 QVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVT 192
            V+  V +  +S  FY+     +      +P +    AM         + L L     + 
Sbjct: 9   LVLFYVKNPAKSEEFYKNLLDTQ--PIESSPTF----AMFVMKT---GLRLGLWAQEEIE 59

Query: 193 DYDK----GNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDG 246
                   G   +      + V +           + + P  +          +DPD 
Sbjct: 60  PKAHQTGGGMELSFQVNSNEMVDEIHRQWSDKEISIIQPPTQMDF--GYTFVGVDPDE 115

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis} Length = 159

 Score = 53.7 bits (129), Expect = 3e-09
 Identities = 28/139 (20%), Positives = 50/139 (35%), Gaps = 21/139 (15%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHF----------V 52
            +   V D++ +++ Y E  G++  +     +    +      P  +             
Sbjct: 22  QIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELGPLQ 81

Query: 53  IELTYNYGVD----KY--DIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNT 106
           +EL           ++    G G  H    V D+ + VE +  KG KV ++ G  +GG  
Sbjct: 82  LELIEPDENPSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQK-GDFEGGR- 139

Query: 107 VIAFI--EDPDGYKFELLE 123
             A+I          ELLE
Sbjct: 140 -YAYIDTLRALKVMIELLE 157

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 52.5 bits (126), Expect = 4e-09
 Identities = 19/123 (15%), Positives = 35/123 (28%), Gaps = 14/123 (11%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEE-KYTNAFLGYGPEDSHFVIELTYNYGV 61
            +   V ++ +        L  K     D   +    +  L      +H V    +  G+
Sbjct: 8   QLDIIVSNVPQVCADLEHILDKKADYANDGFAQFTIGSHCLMLS--QNHLVPLENFQSGI 65

Query: 62  DKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 121
                        I V+DV +  + +   G KV   P     G      ++ P G   + 
Sbjct: 66  ----------IIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTES-LLVQGPAGLVLDF 114

Query: 122 LER 124
              
Sbjct: 115 YRM 117

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 49.0 bits (117), Expect = 6e-08
 Identities = 22/116 (18%), Positives = 39/116 (33%), Gaps = 12/116 (10%)

Query: 131 LCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYG 190
           L Q+ + V ++ +     E     +      N  +    A    G    +  L L+ N+ 
Sbjct: 6   LNQLDIIVSNVPQVCADLEHILDKKA--DYANDGF----AQFTIG----SHCLMLSQNHL 55

Query: 191 VTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDG 246
           V   +  +    I I  +DV +  + +   G KV   P       T+      P G
Sbjct: 56  VPLENFQSG-IIIHIEVEDVDQNYKRLNELGIKVLHGPTVTDW-GTESLLVQGPAG 109

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B* Length = 292

 Score = 55.0 bits (132), Expect = 5e-09
 Identities = 23/177 (12%), Positives = 52/177 (29%), Gaps = 38/177 (21%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           ++ + V D+     F T+ +G+               A      +   + I +       
Sbjct: 7   YLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYRA--DQRAWRIAVQ------ 52

Query: 63  KYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFI--EDPDGY 117
                    + G+ V     + +  + ++  G   TR    +     V+  +  +DP G 
Sbjct: 53  -PGELDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGL 111

Query: 118 KFEL------------------LERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMEL 156
             E+                         + +   +  V D  +++ FY +  G  L
Sbjct: 112 PLEIYYGPAEIFHEPFLPSAPVSGFVTGDQGIGHFVRCVPDTAKAMAFYTEVLGFVL 168

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens} Length = 144

 Score = 52.8 bits (126), Expect = 5e-09
 Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 15/123 (12%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
             +  V +   + +FY   LG+  +         ++   L  G       + L   + V+
Sbjct: 28  FTILYVDNPPASTQFYKALLGVDPVES----SPTFSLFVLANG-----MKLGLWSRHTVE 78

Query: 63  -KYDIGTGFGHFGIAVDD---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 118
            K  +  G G     V++   V +T    KA G  + ++P  ++ G T      DPD ++
Sbjct: 79  PKASVTGGGGELAFRVENDAQVDETFAGWKASGVAMLQQPAKMEFGYTF--TAADPDSHR 136

Query: 119 FEL 121
             +
Sbjct: 137 LRV 139

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens} Length = 144

 Score = 42.4 bits (99), Expect = 2e-05
 Identities = 22/128 (17%), Positives = 41/128 (32%), Gaps = 18/128 (14%)

Query: 124 RGPTPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVL 183
           +G    P    +L V +   S  FY+   G++      +P +    ++         + L
Sbjct: 20  QGHMTHPD-FTILYVDNPPASTQFYKALLGVD--PVESSPTF----SLFVLAN---GMKL 69

Query: 184 ELTYNYGVT-DYDKGNAYAQIAI---GTDDVYKTAEAIKLFGGKVTREPGPLP-GINTKI 238
            L   + V           ++A        V +T    K  G  + ++P  +  G     
Sbjct: 70  GLWSRHTVEPKASVTGGGGELAFRVENDAQVDETFAGWKASGVAMLQQPAKMEFGYTFTA 129

Query: 239 TACLDPDG 246
               DPD 
Sbjct: 130 A---DPDS 134

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A Length = 302

 Score = 54.6 bits (131), Expect = 5e-09
 Identities = 27/195 (13%), Positives = 56/195 (28%), Gaps = 40/195 (20%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           ++   V D D    F T+ LG+++L + +         +L    +  H  I +       
Sbjct: 12  YMGISVKDPDAWKSFATDMLGLQVLDEGE-----KDRFYLRM--DYWHHRIVVH------ 58

Query: 63  KYDIGTGFGHFGIAVDDVA---KTVELIKAKGGKVTR---EPGPVKGGNTVIAFIEDPDG 116
            ++      + G  V          + +   G K+          +    ++   EDP G
Sbjct: 59  -HNGQDDLEYLGWRVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKT-EDPGG 116

Query: 117 YKFEL-------------------LERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMELL 157
              E+                    +     + L   ++R  D+  +  FY        +
Sbjct: 117 NPTEIFWGPRIDMSNPFHPGRPLHGKFVTGDQGLGHCIVRQTDVAEAHKFYSLLGFRGDV 176

Query: 158 RKRDNPEYKYTIAMM 172
             R       T  + 
Sbjct: 177 EYRIPLPNGMTAELS 191

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A Length = 305

 Score = 54.6 bits (131), Expect = 6e-09
 Identities = 24/195 (12%), Positives = 54/195 (27%), Gaps = 40/195 (20%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           ++   V +LD    +    +GM+++   +         +L       H  I L       
Sbjct: 9   YLGLSVSNLDAWRDYAAGIMGMQVVDDGE-----DDRIYLRMD--RWHHRIVLH------ 55

Query: 63  KYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTR---EPGPVKGGNTVIAFIEDPDG 116
             D      + G  V    ++ +  E +K  G             +    ++    DP G
Sbjct: 56  -ADGSDDLAYIGWRVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKL-HDPGG 113

Query: 117 YKFELL-------------------ERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMELL 157
              E+                    +     + L  +++R  D++ +  FY        +
Sbjct: 114 NPTEIFYGPQVDTSSPFHPGRPMFGKFVTEGQGLGHIIIREDDVEEATRFYRLLGLEGAV 173

Query: 158 RKRDNPEYKYTIAMM 172
             +           +
Sbjct: 174 EYKFALPNGAVGTPV 188

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3 Length = 381

 Score = 52.2 bits (124), Expect = 5e-08
 Identities = 42/274 (15%), Positives = 79/274 (28%), Gaps = 46/274 (16%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
            VV+ VG+  +   +Y+   GM+L+            A        + FV+         
Sbjct: 25  AVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATP 84

Query: 63  KYDI--------GTGFGHFGIAVDDVAKTVELIKAKGGKVTREP--GPVKGGNTVIAFIE 112
                       G G     I V D           G +   EP     + G  V+A I 
Sbjct: 85  WGHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIA 144

Query: 113 DPDGYKFELLERG--------------PTPEPLCQVMLRV----------GDLDRSINFY 148
                +  L++R               P  EP      +           G ++  + FY
Sbjct: 145 TYGKTRHTLVDRTGYDGPYLPGYVAAAPIVEPPAHRTFQAIDHCVGNVELGRMNEWVGFY 204

Query: 149 EQAFGMELLRKRDNPEYK------YTIAMMGYGPEDKNVVLELTYNYGVT------DYDK 196
            +  G   +++    +         +  +     + K  + E       +      ++  
Sbjct: 205 NKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDEYLEFYG 264

Query: 197 GNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGP 230
           G     IA+ T D+ +T   ++  G +    P  
Sbjct: 265 GAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDS 298

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A Length = 424

 Score = 51.9 bits (123), Expect = 6e-08
 Identities = 39/290 (13%), Positives = 87/290 (30%), Gaps = 60/290 (20%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           H+ +  GD     + ++  LGM+   K D+      +A       D  F+    Y+  + 
Sbjct: 28  HIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLS 87

Query: 63  KYDI-----------------------GTGFGHFGIAVDDVAKTVELIKAKGGKVTREP- 98
             +I                       G G     I V+D      +  A G   +  P 
Sbjct: 88  AGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPI 147

Query: 99  --------GPVKG-GNTVIAFIE-----------DPDGYKFELLERGPTP---EPLCQVM 135
                     VK  G+ V+ ++             P   + E     P       L   +
Sbjct: 148 VLNEAVTIAEVKLYGDVVLRYVSYKAEDTEKSEFLPGFERVEDASSFPLDYGIRRLDHAV 207

Query: 136 LRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMG----YGPEDKNVVLELTYNYGV 191
             V +L  ++ +     G     +    +     + +        ++  ++      +G 
Sbjct: 208 GNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPVHGT 267

Query: 192 T---------DYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLP 232
                     ++++G     +A+ ++D+++T   ++        +  P P
Sbjct: 268 KRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPSP 317

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A* Length = 132

 Score = 47.3 bits (112), Expect = 4e-07
 Identities = 21/125 (16%), Positives = 38/125 (30%), Gaps = 18/125 (14%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
             +  V +++R+  FY      + +                   +     +   ++ G +
Sbjct: 16  LQLVYVSNVERSTDFYRFIFKKEPVFVTP------RYVAFPSSGD----ALFAIWSGGEE 65

Query: 63  KYDIGTGFGHFGI------AVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDG 116
                  F   GI       VD +       K+    V +EP     G T    I DPDG
Sbjct: 66  PVAEIPRFSEIGIMLPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFGRTF--LISDPDG 123

Query: 117 YKFEL 121
           +   +
Sbjct: 124 HIIRV 128

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A* Length = 132

 Score = 38.4 bits (89), Expect = 4e-04
 Identities = 23/120 (19%), Positives = 40/120 (33%), Gaps = 18/120 (15%)

Query: 133 QVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVT 192
             ++ V +++RS +FY   F  E       P Y           +     L   ++ G  
Sbjct: 16  LQLVYVSNVERSTDFYRFIFKKE--PVFVTPRY----VAFPSSGD----ALFAIWSGGEE 65

Query: 193 DYDKGNAYAQIAIGT------DDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDG 246
              +   +++I I        D ++      K     V +EP       T +    DPDG
Sbjct: 66  PVAEIPRFSEIGIMLPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFGRTFL--ISDPDG 123

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans} Length = 148

 Score = 47.0 bits (111), Expect = 7e-07
 Identities = 18/119 (15%), Positives = 34/119 (28%), Gaps = 1/119 (0%)

Query: 5   VYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKY 64
           VY   D+D+T+K++ E LG          E       +   P +        +       
Sbjct: 26  VYFTKDMDKTVKWFEEILGWSGDIVARDDEGFGDYGCVFDYPSEVAVAHLTPFRGFHLFK 85

Query: 65  DIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE 123
                     + ++ +    + +K  G     +      G    + I   DG      E
Sbjct: 86  GEPIKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPWGARECS-ITTTDGCILRFFE 143

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans} Length = 148

 Score = 44.3 bits (104), Expect = 5e-06
 Identities = 14/123 (11%), Positives = 38/123 (30%), Gaps = 3/123 (2%)

Query: 135 MLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDY 194
           +    D+D+++ ++E+  G        + E       +   P +  V     +       
Sbjct: 26  VYFTKDMDKTVKWFEEILGWSGDIVARDDEGFGDYGCVFDYPSEVAVAHLTPFRGFHLFK 85

Query: 195 DKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLP-GINTKITACLDPDGWKTVFVD 253
            +        +  + +    + +K  G     +    P G   +  +    DG    F +
Sbjct: 86  GEPIKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPWG--ARECSITTTDGCILRFFE 143

Query: 254 NVD 256
           ++ 
Sbjct: 144 SIQ 146

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} Length = 134

 Score = 46.4 bits (110), Expect = 8e-07
 Identities = 16/121 (13%), Positives = 29/121 (23%), Gaps = 15/121 (12%)

Query: 7   RVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDI 66
            + D+   +  + + LG +L  +          A+L         + E       D    
Sbjct: 14  HIPDMQEALTLFCDTLGFELKYRHS------NYAYLELSGCGLRLLEEPARKIIPD---- 63

Query: 67  GTGFGHFGIAVDDVAKTVELIKAK----GGKVTREPGPVKGGNTVIAFIEDPDGYKFELL 122
           G       I V D+      +                 +  G      +  PDG      
Sbjct: 64  GIARVAICIDVSDIDSLHTKLSPALENLPADQVEPLKNMPYGQREF-QVRMPDGDWLNFT 122

Query: 123 E 123
            
Sbjct: 123 A 123

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} Length = 134

 Score = 38.7 bits (90), Expect = 3e-04
 Identities = 18/116 (15%), Positives = 29/116 (25%), Gaps = 15/116 (12%)

Query: 135 MLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDY 194
            L + D+  ++  +    G EL  +  N    Y    +          L L         
Sbjct: 12  FLHIPDMQEALTLFCDTLGFELKYRHSN----YAYLELS------GCGLRLLEEPARKII 61

Query: 195 DKGNAYAQIAIGTDDVYKTAEAIK----LFGGKVTREPGPLPGINTKITACLDPDG 246
             G A   I I   D+      +                 +P    +      PDG
Sbjct: 62  PDGIARVAICIDVSDIDSLHTKLSPALENLPADQVEPLKNMP-YGQREFQVRMPDG 116

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A Length = 126

 Score = 44.9 bits (106), Expect = 2e-06
 Identities = 24/128 (18%), Positives = 39/128 (30%), Gaps = 20/128 (15%)

Query: 5   VYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKY 64
                D D T  FY   LG  ++ +            L  G     F       +     
Sbjct: 8   NLPSRDFDSTAAFYER-LGFGIVFRDA------GWMILQRGDLMLEF-------FAHPGL 53

Query: 65  DIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGG------NTVIAFIEDPDGYK 118
           D    +    + +DD+A+     K+ G + T    P             +A + DPDG  
Sbjct: 54  DPLASWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTL 113

Query: 119 FELLERGP 126
             L++   
Sbjct: 114 LRLIQNEL 121

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis} Length = 357

 Score = 45.2 bits (106), Expect = 9e-06
 Identities = 40/269 (14%), Positives = 70/269 (26%), Gaps = 48/269 (17%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYT-------NAFLGYGPEDSHFVIEL 55
           +V   V +L+     + +     +       + +            L     D H     
Sbjct: 8   YVEMYVENLEVAAFSWVDKYAFAVAGTSRSADHRSIALRQGQVTLVLTEPTSDRHPAAAY 67

Query: 56  TYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPD 115
              +G    DI        +A  DVA   E     G +  R PG         A I    
Sbjct: 68  LQTHGDGVADIA-------MATSDVAAAYEAAVRAGAEAVRAPGQHSEAAVTTATIGGFG 120

Query: 116 GYKFELLERG------------------PTPEPLCQVML-------RVGDLDRSINFYEQ 150
                L++R                        +  + +         GDL  ++ +YE+
Sbjct: 121 DVVHTLIQRDGTSAELPPGFTGSMDVTNHGKGDVDLLGIDHFAICLNAGDLGPTVEYYER 180

Query: 151 AFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLEL---------TYNYGVTDYDKGNAYA 201
           A G   +           +           V L L                   +G    
Sbjct: 181 ALGFRQIFDEHIVVGAQAMNSTVVQSASGAVTLTLIEPDRNADPGQIDEFLKDHQGAGVQ 240

Query: 202 QIAIGTDDVYKTAEAIKLFGGKVTREPGP 230
            IA  ++D  +  +A+   G +  + PG 
Sbjct: 241 HIAFNSNDAVRAVKALSERGVEFLKTPGA 269

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A Length = 166

 Score = 42.7 bits (100), Expect = 2e-05
 Identities = 18/136 (13%), Positives = 30/136 (22%), Gaps = 11/136 (8%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTN-------AFLGYGPEDSHFVIEL 55
            ++     +   + FY    G         P+ K          + L             
Sbjct: 29  MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVS 88

Query: 56  TYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPD 115
           +          G+G   F +   D    V      G                   + DP 
Sbjct: 89  SLPGFSTAKSEGSGV-TFLLGTKDAEAAVAKAVDAGAVKVEVTEAEVELGFK-GKVTDPF 146

Query: 116 GYKFELLERG--PTPE 129
           G  +   E+    T E
Sbjct: 147 GVTWIFAEKKTVITDE 162

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae} Length = 244

 Score = 40.4 bits (94), Expect = 2e-04
 Identities = 24/119 (20%), Positives = 38/119 (31%), Gaps = 10/119 (8%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
               +  +      FY E LGMK L       E+     LG        V+E   +    
Sbjct: 13  IPTLKANNRKLNETFYIETLGMKALL------EESAFLSLGDQTGLEKLVLEEAPSMRTR 66

Query: 63  KYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 121
           K +         + V++    +E I +K   + R     KG N     I  P+     +
Sbjct: 67  KVEGRKKLARLIVKVEN-PLEIEGILSKTDSIHR---LYKGQNGYAFEIFSPEDDLILI 121

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A Length = 124

 Score = 38.0 bits (88), Expect = 6e-04
 Identities = 16/126 (12%), Positives = 31/126 (24%), Gaps = 20/126 (15%)

Query: 7   RVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDI 66
              D+   ++F+T+ LG   +   D         F G   +D    I    +       +
Sbjct: 12  TARDVAEAVEFWTDRLGFSRVFVED--------DFAGVVRDDVTLFISAVQD------QV 57

Query: 67  GTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTV------IAFIEDPDGYKFE 120
                   + V  + +             R+         V         + DP G    
Sbjct: 58  VPDNTQAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCVH 117

Query: 121 LLERGP 126
            +    
Sbjct: 118 FVAEEQ 123

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A Length = 122

 Score = 37.9 bits (88), Expect = 6e-04
 Identities = 16/119 (13%), Positives = 30/119 (25%), Gaps = 20/119 (16%)

Query: 5   VYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKY 64
           V    D+   + F+ + LG +     D  +  +  A +  G    H           +  
Sbjct: 10  VLTAVDVPANVSFWVDTLGFEK----DFGDRDF--AGVRRGDIRLHI-------SRTEHQ 56

Query: 65  DIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIA------FIEDPDGY 117
            +      + I V D     E           +           +       + DP G 
Sbjct: 57  IVADNTSAW-IEVTDPDALHEEWARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGN 114

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	262
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	100.0
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	100.0
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	100.0
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	100.0
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	100.0
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	100.0
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	100.0
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	100.0
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	100.0
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	100.0
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	100.0
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	100.0
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	100.0
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	100.0
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	100.0
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.97
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.96
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.95
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.95
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.94
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.94
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.89
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.87
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.87
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.85
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.84
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.84
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.84
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.84
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.83
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.83
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.83
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.83
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.82
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	99.82
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.82
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.82
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.81
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.81
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.81
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.81
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.81
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.8
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.8
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.8
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.8
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.8
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.8
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.8
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.79
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.79
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.79
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.79
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.79
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.79
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.78
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.78
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.78
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.77
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.77
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.77
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.77
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.77
2i7r_A	118	Conserved domain protein; structural genomics cons	99.77
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.77
3ghj_A	141	Putative integron gene cassette protein; integron	99.77
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.77
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.77
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.77
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.76
2i7r_A	118	Conserved domain protein; structural genomics cons	99.76
3ghj_A	141	Putative integron gene cassette protein; integron	99.76
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.76
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.76
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.76
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.75
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.75
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.75
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.75
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.75
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.75
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.75
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.74
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.74
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.74
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.74
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.74
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.74
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.74
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.74
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.73
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.73
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.73
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.73
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.73
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.73
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.73
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.73
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.73
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.73
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.73
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.72
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.72
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.72
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.72
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.72
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.72
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.72
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.72
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.72
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.72
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.71
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.71
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.71
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.71
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.71
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.7
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.7
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.7
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.7
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.69
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.69
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.68
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.68
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.68
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.67
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.67
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.66
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.66
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.66
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.65
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.65
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.64
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.64
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.63
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.62
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.61
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.61
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.61
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.6
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.59
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.59
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.59
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.58
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.57
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.56
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.56
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.55
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.54
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.52
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.52
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.46
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.45
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.44
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.43
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.39
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.38
1tsj_A	139	Conserved hypothetical protein; structural genomic	99.3
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.3
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	99.29
3l20_A	172	Putative uncharacterized protein; hypothetical pro	99.29
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	99.26
1tsj_A	139	Conserved hypothetical protein; structural genomic	99.25
3l20_A	172	Putative uncharacterized protein; hypothetical pro	99.24
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.2
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	99.06
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	98.63
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	98.47
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	98.29
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	97.7
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	97.39
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	96.16
3opy_A	989	6-phosphofructo-1-kinase alpha-subunit; ATP bindin	89.04
1k4n_A	192	Protein EC4020, protein YECM; structural genomics,	83.69
3opy_A	989	6-phosphofructo-1-kinase alpha-subunit; ATP bindin	82.82

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=100.00  E-value=2.6e-36  Score=248.39  Aligned_cols=240  Identities=33%  Similarity=0.588  Sum_probs=184.2

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCC-----------CCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCC
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIP-----------EEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTG   69 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   69 (262)
                      |+||+|.|+|++++++||+++|||++..+....           .+.+..+++.++.......+++...........+.|
T Consensus        28 i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~~~g  107 (330)
T 3zi1_A           28 ALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGVGDYKLGND  107 (330)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTTTCCEEEEEEETTCCCCCBCSS
T ss_pred             eeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCCCccEEEEeccCCCCccccCCC
Confidence            579999999999999999999999998765443           334556777776555556778776555444556779


Q ss_pred             ceeEEEEeCCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCC-CCCCceeEEeeecChhhhHHHH
Q 024779           70 FGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP-TPEPLCQVMLRVGDLDRSINFY  148 (262)
Q Consensus        70 ~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~-~~~~~~~v~l~v~d~~~~~~FY  148 (262)
                      +.|++|.|+|+   .++++++|+++...+    .   ..++|.||||+.|||++... .+..+.|+.|.|+|++++.+||
T Consensus       108 ~~hiaf~V~d~---~~~l~~~G~~~~~~~----~---~~~~~~DPdG~~iel~~~~~~~~~~i~hv~L~v~Dl~~a~~FY  177 (330)
T 3zi1_A          108 FMGITLASSQA---VSNARKLEWPLTEVA----E---GVFETEAPGGYKFYLQNRSLPQSDPVLKVTLAVSDLQKSLNYW  177 (330)
T ss_dssp             EEEEEEECHHH---HHHHHHHTCCCEEEE----T---TEEEEECTTSCEEEEESSCCTTSCSEEEEEEEESCHHHHHHHH
T ss_pred             eeEEEEECchH---HHHHHHcCCceeccC----C---ceEEEECCCCCEEEEEecCCCCCCceeEEEEECCCHHHHHHHH
Confidence            99999999987   677888999887543    1   26889999999999998764 5678999999999999999999


Q ss_pred             HHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEec--CHHHHHHHHHHhCCeeec
Q 024779          149 EQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTD--DVYKTAEAIKLFGGKVTR  226 (262)
Q Consensus       149 ~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~--dl~~~~~~l~~~g~~~~~  226 (262)
                      +++|||++.......+    ..++..++  ....+++.....  +...+.+..|++|.|+  |+++++++|+++|+++..
T Consensus       178 ~~vLG~~~~~~~~~~~----~~~l~~g~--~~~~l~l~~~~~--~~~~~~~~~hiaf~v~~~dld~~~~rl~~~G~~i~~  249 (330)
T 3zi1_A          178 CNLLGMKIYENDEEKQ----RALLGYAD--NQCKLELQGVKG--GVDHAAAFGRIAFSCPQKELPDLEDLMKRENQKILT  249 (330)
T ss_dssp             HHTTCCEEEEEETTTT----EEEEESST--TSCEEEEEECSS--CCCCBTTCCEEEEEECGGGHHHHHHHHHHTTCEEEE
T ss_pred             HHhcCCEEEeeccCCc----EEEEEeCC--ceEEEEECCCCC--CCCCCCCCceEEEEEEcccHHHHHHHHHHcCCcEec
Confidence            9999999987654322    34455443  345666654332  2233467789999984  899999999999999887


Q ss_pred             CCccC--CC-CcceEEEEeCCCCcEEEEEeccccc
Q 024779          227 EPGPL--PG-INTKITACLDPDGWKTVFVDNVDFL  258 (262)
Q Consensus       227 ~~~~~--~~-~~~~~~~~~DP~G~~ie~~~~~~~~  258 (262)
                      +|...  ++ ...+++||+|||||.|||+++..+.
T Consensus       250 ~~~~~~~pg~~g~~~~~f~DPdG~~iEl~~~~~~~  284 (330)
T 3zi1_A          250 PLVSLDTPGKATVQVVILADPDGHEICFVGDEAFR  284 (330)
T ss_dssp             EEEEECCTTSCCEEEEEEECTTCCEEEEEEHHHHH
T ss_pred             CceecccCCCCceEEEEEECCCCCEEEEEEecccc
Confidence            76543  21 1248899999999999999987654

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=100.00  E-value=1.6e-35  Score=244.92  Aligned_cols=236  Identities=13%  Similarity=0.156  Sum_probs=179.6

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCC-
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD-   79 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d-   79 (262)
                      |+||.|.|+|++++++||+++|||++..+..      ...++..........+.+...       ...++.|++|.|+| 
T Consensus        12 l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~~~l~l~~~-------~~~g~~~~af~v~~~   78 (339)
T 3lm4_A           12 LARAELFSPKPQETLDFFTKFLGMYVTHREG------QSVYLRGYEDPYPWSLKITEA-------PEAGMGHAAMRTSSP   78 (339)
T ss_dssp             EEEEEEEESSHHHHHHHHHHTTCCEEEEEET------TEEEEECTTCSSSCSEEEEEC-------SSCEEEEEEEEESSH
T ss_pred             EEEEEEEeCCHHHHHHHHHhcCCCEEEEecC------CEEEEEecCCCCceEEEEeeC-------CCCCcceEEEEeCCH
Confidence            5799999999999999999999999987643      244554422212223333332       13468899999997 


Q ss_pred             --HHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCC------------------------CCCCcee
Q 024779           80 --VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP------------------------TPEPLCQ  133 (262)
Q Consensus        80 --~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~------------------------~~~~~~~  133 (262)
                        +++++++|+++|+++...+.  ..+..+.++|.||+||.|||+....                        .+.+++|
T Consensus        79 ~dld~~~~~l~~~G~~~~~~~~--~~~~~~~~~f~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~H  156 (339)
T 3lm4_A           79 EALERRAKSLTDGNVDGTWSED--QFGYGKTFEYQSPDGHNLQLLWEAEKYVAPPELRSKILTRPSKKPLQGIPVKRIDH  156 (339)
T ss_dssp             HHHHHHHHHHHHTTCCEEEECC--STTBCCEEEEECTTCCEEEEECCBCCCCCCGGGCCSSTTCSSCCCSBSSCCCEEEE
T ss_pred             HHHHHHHHHHHHCCCceeeccC--CCCceEEEEEECCCCCEEEEEEeeeEcCCCccccccccCcccccCCCCCCcceeee
Confidence              89999999999999876554  2345678999999999999985421                        2347899


Q ss_pred             EEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecC---H
Q 024779          134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDD---V  210 (262)
Q Consensus       134 v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~d---l  210 (262)
                      +.|.|+|++++.+||+++|||++..... +++.....++..++  ..+.+.+....    ....++.+|++|.|+|   +
T Consensus       157 v~l~v~D~~~a~~FY~~vLG~~~~~~~~-~~g~~~~~~l~~~~--~~~~l~~~~~~----~~~~~~~~Hiaf~v~d~~~v  229 (339)
T 3lm4_A          157 LNLMSSDVTAVKDSFERHLGFRTTERVV-DGNVEIGAWMSSNL--LGHEVACMRDM----TGGHGKLHHLAFFYGTGQHN  229 (339)
T ss_dssp             EEEEESCHHHHHHHHHHHHCCEEEEEEE-ETTEEEEEEEESSS--SSCSEEEEECT----TSCCSEEEEEEEECCCHHHH
T ss_pred             EEEEcCCHHHHHHHHHHhCCCeEEEEEe-cCCcEEEEEEEeCC--CceEEEEeccC----CCCCCceeEEEEEeCCHHHH
Confidence            9999999999999999999999987654 33334456666543  34556666421    1234579999999999   8


Q ss_pred             HHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccccc
Q 024779          211 YKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDFL  258 (262)
Q Consensus       211 ~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~~  258 (262)
                      ++++++|+++|+++..+|.++..+..+++|++||+||.|||+...++.
T Consensus       230 ~~~~~~l~~~G~~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~~~~  277 (339)
T 3lm4_A          230 IDAVEMFRDYDIQIEAGPDKHGITQSQFLYVFEPGGNRIELFGEAGYL  277 (339)
T ss_dssp             HHHHHHHHHTTCEEEEEEEEETGGGEEEEEEECTTSCEEEEECCCCCC
T ss_pred             HHHHHHHHHCCCeEEeCCcccccCCceEEEEEcCCCCEEEEEEcCCee
Confidence            889999999999999888877766568899999999999999766544

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=100.00  E-value=3.9e-34  Score=235.45  Aligned_cols=240  Identities=15%  Similarity=0.089  Sum_probs=169.8

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCC-CCcceeeEeeecCCCceeEEEeeecCCCCCCC-CCCCceeEEEEeC
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIP-EEKYTNAFLGYGPEDSHFVIELTYNYGVDKYD-IGTGFGHFGIAVD   78 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~i~~~v~   78 (262)
                      |+||+|.|+|++++.+||+++||++++.+.... +......++..........+.+......++.. ...++.|++|.|+
T Consensus         9 i~Hv~l~v~Dl~~s~~FY~~vLGl~~v~~~~~~~~~~~~~l~~~~~~g~~g~~l~l~~~~~~~~~~~~~~~~~hiaf~V~   88 (335)
T 3oaj_A            9 IHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGARQGVIGDGQVGVTSYVVP   88 (335)
T ss_dssp             EEEEEEEESCHHHHHHHHTTTTCCEEEEEEECSSCTTSEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEEEEEC
T ss_pred             ccEEEEEeCCHHHHHHHHHHhcCCEEEeeecCCCCCceEEEEEecCCCCCCcEEEEEECCCCCCCCCCCCceEEEEEEec
Confidence            579999999999999999999999998875322 12222233332222112345555432222222 2346889999999


Q ss_pred             --CHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCCC---------------CCCceeEEeeecCh
Q 024779           79 --DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT---------------PEPLCQVMLRVGDL  141 (262)
Q Consensus        79 --d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~~---------------~~~~~~v~l~v~d~  141 (262)
                        |+++++++|+++|+++..  .  ..++.+.+||.|||||.|||++..+.               ..+++||+|.|+|+
T Consensus        89 ~~dl~~~~~rL~~~Gv~~~~--~--~~~g~~~~~f~DPdGn~iEl~~~~~~~~~~~~~~~v~~~~~i~gl~Hv~L~v~Dl  164 (335)
T 3oaj_A           89 KGAMAFWEKRLEKFNVPYTK--I--ERFGEQYVEFDDPHGLHLEIVEREEGEANTWTFGEVTPDVAIKGFGGATLLSEQP  164 (335)
T ss_dssp             TTCHHHHHHHHHHTTCCCEE--E--EETTEEEEEEECTTSCEEEEEECSCSCCCCCCBTTBCTTTSCCEEEEEEEECSSH
T ss_pred             HHHHHHHHHHHHhCcceeee--e--ccCCcEEEEEECCCCCEEEEEEeCCCCcCCCcCCCCChhhhhccccceEEEECCH
Confidence              999999999999998864  2  22367889999999999999986532               13689999999999


Q ss_pred             hhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccC-CceeEEEEEecC---HHHHHHHH
Q 024779          142 DRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKG-NAYAQIAIGTDD---VYKTAEAI  217 (262)
Q Consensus       142 ~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~i~~~v~d---l~~~~~~l  217 (262)
                      +++.+||+++|||++.....    ..  ..+..+.  .+..+.+...........+ .+++|+||.|+|   ++++.++|
T Consensus       165 e~t~~FY~~vLG~~~~~~~~----~~--~~~~~g~--~~~~l~l~~~~~~~~~~~g~g~~~HiAf~v~d~~~l~~~~~~L  236 (335)
T 3oaj_A          165 DKTADLLENIMGLERVGKEG----DF--VRYRSAG--DIGNVIDLKLTPIGRGQMGAGTVHHIAWRANDDEDQLDWQRYI  236 (335)
T ss_dssp             HHHHHHHHHTSCCEEEEEET----TE--EEEECSS--SSSCEEEEESSCCCBCBCSBTEEEEEEEEESSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCEEeeccC----CE--EEEEeCC--CCcEEEEEeCCCCCcCCCCCcceEEEEEEcCCHHHHHHHHHHH
Confidence            99999999999999987532    11  2222221  2345556543322222233 468999999988   66788999


Q ss_pred             HHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecc
Q 024779          218 KLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNV  255 (262)
Q Consensus       218 ~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  255 (262)
                      +++|+++.. +.+..+  .+++|++||+||.|||....
T Consensus       237 ~~~G~~~~~-~~~r~~--~~siYfrDP~G~~iEl~td~  271 (335)
T 3oaj_A          237 ASHGYGVTP-VRDRNY--FNAIYFREHGEILFEIATDP  271 (335)
T ss_dssp             HHTTCCCCC-CEECSS--SEEEEEECTTSCEEEEEESC
T ss_pred             HHCCCCccc-cccCCc--EEEEEEECCCCcEEEEEeCC
Confidence            999998653 333333  47899999999999999873

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=100.00  E-value=1.6e-34  Score=237.51  Aligned_cols=233  Identities=18%  Similarity=0.209  Sum_probs=175.0

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEe---
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV---   77 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v---   77 (262)
                      |+||.|.|+|++++++||+++|||++..+..      ...++.......+..+.+...       ...++.|++|.|   
T Consensus        18 l~hv~l~v~Dl~~a~~FY~~vlG~~~~~~~~------~~~~l~~~~~~~~~~l~l~~~-------~~~~~~~~~f~v~~~   84 (323)
T 1f1u_A           18 CAYMEIVVTDLAKSREFYVDVLGLHVTEEDE------NTIYLRSLEEFIHHNLVLRQG-------PIAAVAAFAYRVKSP   84 (323)
T ss_dssp             EEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEEC-------SSCEEEEEEEEESSH
T ss_pred             eeEEEEEeCCHHHHHHHHHhCCCCEEeeecC------CEEEEEecCCCCcEEEEEEEC-------CCCCeeEEEEEeCCH
Confidence            4799999999999999999999999887542      245555322221223344332       124678999999   


Q ss_pred             CCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCCC---------------CCCceeEEeeecChh
Q 024779           78 DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT---------------PEPLCQVMLRVGDLD  142 (262)
Q Consensus        78 ~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~~---------------~~~~~~v~l~v~d~~  142 (262)
                      +|+++++++|+++|+++..++.....+..+.++|.||+|+.|||++....               +.+++|+.|.|+|++
T Consensus        85 ~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DP~G~~iel~~~~~~~~~~~~~~~~~~~~~~~~l~Hv~l~v~D~~  164 (323)
T 1f1u_A           85 AEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYETEHVERLTQRYDLYSAGELVRLDHFNQVTPDVP  164 (323)
T ss_dssp             HHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBCCCCCCTTCGGGCCTTCCCEEEEEEEEESCHH
T ss_pred             HHHHHHHHHHHhCCCcEEeccccccCCcceEEEEECCCCCEEEEEEecccccccccccccCCCCCCceeeeEEEecCCHH
Confidence            68999999999999998766552222355778999999999999965321               246899999999999


Q ss_pred             hhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecCHHH---HHHHHHH
Q 024779          143 RSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYK---TAEAIKL  219 (262)
Q Consensus       143 ~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~dl~~---~~~~l~~  219 (262)
                      ++.+|| ++|||++......+++.....++..++  .++.+.+...       .+++++|++|.|+|+++   ++++|++
T Consensus       165 ~a~~FY-~~LGf~~~~~~~~~~g~~~~~f~~~~~--~~~~~~~~~~-------~~~~~~Hiaf~v~d~d~v~~~~~~l~~  234 (323)
T 1f1u_A          165 RGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQ--TVHDTALTGG-------NGPRMHHVAFATHEKHNIIQICDKMGA  234 (323)
T ss_dssp             HHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSS--SSCSEEEEES-------SBSEEEEEEEECSSHHHHHHHHHHHHH
T ss_pred             HHHHHH-HhCCCeEEEEEEcCCCcEEEEEEEcCC--CcccEEEeCC-------CCCCceEEEEECCCHHHHHHHHHHHHH
Confidence            999999 999999987654444333445565432  3444555421       13488999999999998   9999999


Q ss_pred             hCC--eeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          220 FGG--KVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       220 ~g~--~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                      +|+  ++..+|.++..+.++++|++||+||.||++....
T Consensus       235 ~G~~~~i~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~  273 (323)
T 1f1u_A          235 LRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQDY  273 (323)
T ss_dssp             TTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCC
T ss_pred             CCCccccccCCCccCCCCcEEEEEECCCCCEEEEEeCCE
Confidence            999  9987777776555678999999999999987543

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=100.00  E-value=3.7e-34  Score=234.10  Aligned_cols=235  Identities=17%  Similarity=0.157  Sum_probs=173.7

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeee-cCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCC
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGY-GPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD   79 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d   79 (262)
                      |+||.|.|+|++++++||+++|||++..+..  .   ...++.. +... ...+.+...       ...++.|++|.|+|
T Consensus         9 i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~--~---~~~~l~~~~~~~-~~~l~l~~~-------~~~~~~h~a~~v~~   75 (309)
T 3hpy_A            9 PGHAQVRVLNLEEGIHFYRNVLGLVETGRDD--Q---GRVYFKCWDERD-HSCYIIREA-------DTAGIDFFGFKVLD   75 (309)
T ss_dssp             EEEEEEEESSHHHHHHHHHHTSCCEEEEECT--T---SCEEEECTTCCB-SCSEEEEEC-------SSCEEEEEEEEESC
T ss_pred             eeEEEEEcCCHHHHHHHHHhccCCEEEEEcC--C---CeEEEEeccCCC-ceEEEEEeC-------CCCceeEEEEEECC
Confidence            5799999999999999999999999987642  1   2345543 3322 122333322       12377899999996


Q ss_pred             ---HHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCC----------------------CCCCceeE
Q 024779           80 ---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP----------------------TPEPLCQV  134 (262)
Q Consensus        80 ---~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~----------------------~~~~~~~v  134 (262)
                         +++++++|+++|+++...+.....+..+.++|.||+||.|||+....                      .+.+++|+
T Consensus        76 ~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~i~Hv  155 (309)
T 3hpy_A           76 KATLEKLDADLQAYGLTTTRIPAGEMLETGERVRFELPSGHLIELYAEKTCVGNGISEVNPAPWNAQREHGIAPIQLDHC  155 (309)
T ss_dssp             HHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBCBCCCSSCSBSCCSCCGGGGSSSCCSEEEEE
T ss_pred             HHHHHHHHHHHHhCCCceeeccCCccCCCeeEEEEECCCCCEEEEEEccceecccccccCCCCCccccCCCcccceeeeE
Confidence               99999999999999876544322346788999999999999996432                      12468999


Q ss_pred             EeeecChhhhHHHHHHhcCCeeeeeccCcC-ccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecCHHH-
Q 024779          135 MLRVGDLDRSINFYEQAFGMELLRKRDNPE-YKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYK-  212 (262)
Q Consensus       135 ~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~dl~~-  212 (262)
                      .|.|+|++++.+||+++|||++......++ +.....++..++  ..+.+.+...      +...+..|++|.|+|+++ 
T Consensus       156 ~l~v~D~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~------~~~~~~~Hiaf~v~d~~~v  227 (309)
T 3hpy_A          156 LLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSH--KVHDIAFVEY------PEKGKLHHCSFLLESWEQV  227 (309)
T ss_dssp             EEEESCHHHHHHHHHHTSCCEEEEEEECSSSCSEEEEEEESSS--SSCSEEEEEC------SSTTEEEEEEEECSSHHHH
T ss_pred             EEEeCCHHHHHHHHHHhcCCEEEEEEecCCCCceEEEEEecCC--CceeEEEecC------CCCCceeEEEEECCCHHHH
Confidence            999999999999999999999977654332 223445555432  2334444421      123468999999987665 


Q ss_pred             --HHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          213 --TAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       213 --~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                        ++++|+++|+++..+|.++..+..+++|++||+||.|||.....
T Consensus       228 ~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~g~  273 (309)
T 3hpy_A          228 LRAGDIMSMNEVNVDIGPTRHGVTRGCTIYAWDPSGNRFETFMGGY  273 (309)
T ss_dssp             HHHHHHHHHTTCCBSSCSEECSSSSEEEEEEECTTSCEEEEEEECC
T ss_pred             HHHHHHHHHCCCEEEeCCccCCCCccEEEEEECCCCCEEEEEeCCc
Confidence              67899999999998887776655688999999999999998744

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=100.00  E-value=3.7e-34  Score=230.77  Aligned_cols=240  Identities=20%  Similarity=0.168  Sum_probs=169.8

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCH
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDV   80 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~   80 (262)
                      +.|+.|.|+|++++++||+++|||++...... .+.....++..+..   ....+....... ........+++|.|+|+
T Consensus        33 ~~~v~l~v~D~~~a~~FY~~vlG~~~~~~~~~-~~~~~~~~~~~~g~---~~~~l~~~~~~~-~~~~~~~~~~~~~v~d~  107 (282)
T 3oxh_A           33 PNWVDLQTTDQSAAKKFYTSLFGWGYDDNPVP-GGGGVYSMATLNGE---AVAAIAPMPPGA-PEGMPPIWNTYIAVDDV  107 (282)
T ss_dssp             EEEEEEEESCHHHHHHHHHHHHCCEEEEEC------CCEEEEEETTE---EEEEEEECCSCC----CCCEEEEEEECSCH
T ss_pred             cEEEEEecCCHHHHHHHHHHhcCcEEeecCCC-CCccCEEEEEeCCe---eeEeeccCCCCC-CCCCCCcEEEEEEeCCH
Confidence            47999999999999999999999998765321 11001223333321   122232221111 11223446799999999


Q ss_pred             HHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCCC--------CCCceeEEeeecChhhhHHHHHHhc
Q 024779           81 AKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT--------PEPLCQVMLRVGDLDRSINFYEQAF  152 (262)
Q Consensus        81 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~~--------~~~~~~v~l~v~d~~~~~~FY~~~l  152 (262)
                      ++++++++++|+++..+|..... .++.++|.||+||.|+|++....        ++.+.|+.|.|+|++++++||+++|
T Consensus       108 d~~~~~l~~~G~~~~~~p~~~~~-~g~~~~~~DP~G~~i~l~~~~~~~~~~~~~~~~~~~~~~l~v~D~~~a~~FY~~vl  186 (282)
T 3oxh_A          108 DAVVDKVVPGGGQVMMPAFDIGD-AGRMSFITDPTGAAVGLWQANRHIGATLVNETGTLIWNELLTDKPDLALAFYEAVV  186 (282)
T ss_dssp             HHHHTTTTTTTCEEEEEEEEETT-TEEEEEEECTTCCEEEEEEESSCCSCSBCSSTTSEEEEEEECSCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCEEEECCEecCC-CeEEEEEECCCCCEEEEEEccccCCccccCCCCccEEEEEEcCCHHHHHHHHHHHh
Confidence            99999999999999877766653 56889999999999999987642        4579999999999999999999999


Q ss_pred             CCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecCHHHHHHHHHHhCCeeecCCccCC
Q 024779          153 GMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLP  232 (262)
Q Consensus       153 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~dl~~~~~~l~~~g~~~~~~~~~~~  232 (262)
                      ||++......+...+  ..+..+.   .....+..  ..  ....++.++++|.|+|+++++++++++|+++..+|.+.+
T Consensus       187 G~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~--~~--~~~~~~~~~~~~~v~dvd~~~~~~~~~G~~~~~~p~~~~  257 (282)
T 3oxh_A          187 GLTHSSMEIAAGQNY--RVLKAGD---AEVGGCME--PP--MPGVPNHWHVYFAVDDADATAAKAAAAGGQVIAEPADIP  257 (282)
T ss_dssp             CCEEEEC-------C--EEEEETT---EEEEEEEC--CS--STTCCSEEEEEEECSCHHHHHHHHHHTTCEEEEEEEEET
T ss_pred             CCeeeeccCCCCcce--EEEEcCC---ccEeeecC--CC--CCCCCCeEEEEEEeCCHHHHHHHHHHcCCEEecCCeEcC
Confidence            999876431222223  3333221   12222221  11  223457789999999999999999999999999888877


Q ss_pred             CCcceEEEEeCCCCcEEEEEeccc
Q 024779          233 GINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       233 ~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                      ++ ++++|++||+||.|+|++..+
T Consensus       258 ~~-~~~~~~~DPdGn~~~l~~~~~  280 (282)
T 3oxh_A          258 SV-GRFAVLSDPQGAIFSVLKAAP  280 (282)
T ss_dssp             TT-EEEEEEECTTSCEEEEEEEC-
T ss_pred             CC-eEEEEEECCCCCEEEEEecCC
Confidence            64 489999999999999999764

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=5.6e-34  Score=232.94  Aligned_cols=229  Identities=19%  Similarity=0.305  Sum_probs=175.8

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEe---
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV---   77 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v---   77 (262)
                      |+||.|.|+|++++++||+++|||++..+..      ...++..+.......+.+...       ...++.|++|.|   
T Consensus         9 l~~v~l~v~Dl~~a~~FY~~vlG~~~~~~~~------~~~~l~~~~~~~~~~l~l~~~-------~~~~~~~~~~~v~~~   75 (310)
T 3b59_A            9 IRYVGYGVKDFDAEKAFYADVWGLEPVGEDA------NNAWFKAQGADEHHVVQLRRA-------DENRIDVIALAADSR   75 (310)
T ss_dssp             EEEEEEEESSHHHHHHHHHHTTCCEEEEECS------SEEEEECTTSCCSCSEEEEEC-------SSCEEEEEEEEESSH
T ss_pred             eeEEEEecCCHHHHHHHHHhCcCCEEeeecC------CeEEEEECCCCCCEEEEEEEC-------CCCCeeEEEEEeCCH
Confidence            5799999999999999999999999876542      245565543101123444432       134678999999   


Q ss_pred             CCHHHHHHHHHHcCCeeecCCcc--cCCCCeEEEEEECCCCCEEEEEEcCC------------CCCCceeEEeeecChhh
Q 024779           78 DDVAKTVELIKAKGGKVTREPGP--VKGGNTVIAFIEDPDGYKFELLERGP------------TPEPLCQVMLRVGDLDR  143 (262)
Q Consensus        78 ~d~~~~~~~l~~~G~~~~~~~~~--~~~~~~~~~~~~DP~G~~iel~~~~~------------~~~~~~~v~l~v~d~~~  143 (262)
                      +|+++++++|+++|+++..++..  .. ++.+.++|.||+||.|+|++...            .+.+++|+.|.|+|+++
T Consensus        76 ~dld~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~l~hv~l~v~D~~~  154 (310)
T 3b59_A           76 SDVDALRASVEAAGCKVASEPAVLATP-GGGYGFRFFSPDGLLFEVSSDVAKGAKRDLARWEGVPVKISHIVLHSPNHQD  154 (310)
T ss_dssp             HHHHHHHHHHHHHTCCBCCCSEECCST-TCCEEEEEECTTSCEEEEEECCCCCCCCCCCTTCCCCCEEEEEEEEETTHHH
T ss_pred             HHHHHHHHHHHhCCCeEeecCcccccc-CCceEEEEECCCCCEEEEEEcccccCCCccCCCCCcCcEeceEEEecCCHHH
Confidence            68999999999999998877654  33 35677889999999999997653            23478999999999999


Q ss_pred             hHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecCHHHH---HHHHHHh
Q 024779          144 SINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKT---AEAIKLF  220 (262)
Q Consensus       144 ~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~dl~~~---~~~l~~~  220 (262)
                      +.+||+++|||++.....  +   ...++..+  ..++.+.+...       . ++..|++|.|+|++++   +++|+++
T Consensus       155 a~~FY~~~LG~~~~~~~~--~---~~~fl~~~--~~~~~l~l~~~-------~-~g~~hi~f~v~d~d~~~~~~~~l~~~  219 (310)
T 3b59_A          155 MVKFFTDVLGFKVSDWLG--D---FMCFLRCN--SAHHRIAILPG-------P-PCLNHVAYDMLSVDDMMRGAHRLKVK  219 (310)
T ss_dssp             HHHHHHHTSCCEEEEEET--T---TEEEEESS--SBSCSEEEEES-------S-SEEEEEEEECSSHHHHHHHHHHHHHT
T ss_pred             HHHHHHhCCCCEEEEeeC--C---eEEEEecC--CCcceEEEECC-------C-CceEEEEEEcCCHHHHHHHHHHHHHc
Confidence            999999999999986532  1   23445443  23455655531       1 5789999999998776   9999999


Q ss_pred             CCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccccc
Q 024779          221 GGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDFL  258 (262)
Q Consensus       221 g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~~  258 (262)
                      |+++..+|.+++.+.++++|++||+||.|||.+..+..
T Consensus       220 G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~~~  257 (310)
T 3b59_A          220 GIDIGWGPGRHTAGNNTFSYFVTPGGFVTEYTSELEEV  257 (310)
T ss_dssp             TCCCSEEEEECSTTCCEEEEEECTTSCEEEEEECCCBC
T ss_pred             CCceeecCccccCCCcEEEEEECCCCCEEEEEeCccEe
Confidence            99999888877666568899999999999999987654

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=100.00  E-value=7.7e-34  Score=231.97  Aligned_cols=235  Identities=17%  Similarity=0.234  Sum_probs=169.4

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEe---
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV---   77 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v---   77 (262)
                      |+||.|.|+|++++++||+++|||++..+..  .   ...++..+.....+.+.+...       ...+..|++|.|   
T Consensus         8 i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~--~---~~~~l~~~~~~~~~~l~~~~~-------~~~~~~~~~f~v~~~   75 (307)
T 1mpy_A            8 PGHVQLRVLDMSKALEHYVELLGLIEMDRDD--Q---GRVYLKAWTEVDKFSLVLREA-------DEPGMDFMGFKVVDE   75 (307)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEECT--T---SCEEEECTTCCBSCSEEEEEC-------SSCEEEEEEEEESCH
T ss_pred             eeeEEEEeCCHHHHHHHHHHccCCEEEeecC--C---CcEEEEecCCCCceEEEEccC-------CCCCcceEEEEeCCH
Confidence            5799999999999999999999999987542  1   134555543222222333221       123678999999   


Q ss_pred             CCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCC----------------------CCCCceeEE
Q 024779           78 DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP----------------------TPEPLCQVM  135 (262)
Q Consensus        78 ~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~----------------------~~~~~~~v~  135 (262)
                      +|+++++++|+++|+++..++.....+..+.++|.||+||.|||++...                      ...+++|+.
T Consensus        76 ~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~hv~  155 (307)
T 1mpy_A           76 DALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADKEYTGKWGLNDVNPEAWPRDLKGMAAVRFDHAL  155 (307)
T ss_dssp             HHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBCBCCSTTCCSBSCCSSCSCCCTTCCCEEEEEE
T ss_pred             HHHHHHHHHHHHcCCceecCCcccCCCceEEEEEECCCCCEEEEEEcchhcccccccccCCcCCcccCCCCCcCceeeEE
Confidence            7899999999999999876654222235578899999999999997421                      123589999


Q ss_pred             eeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCc-eeEEEEEec---CHH
Q 024779          136 LRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNA-YAQIAIGTD---DVY  211 (262)
Q Consensus       136 l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~i~~~v~---dl~  211 (262)
                      |.|+|++++++||+++|||++.......++.....++.....  +..+.+...       ..++ ..|++|.|+   |++
T Consensus       156 l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~-------~~~g~~~hi~f~v~d~~dv~  226 (307)
T 1mpy_A          156 MYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTK--AHDVAFIHH-------PEKGRLHHVSFHLETWEDLL  226 (307)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSB--SCSEEEEEC-------SSSSEEEEEEEECSCHHHHH
T ss_pred             EEcCCHHHHHHHHHHHcCCeeEeeeecCCCcEEEEEEEcCCC--ceeEEEecC-------CCCCcceEEEEEcCCHHHHH
Confidence            999999999999999999998765432221111234443321  223444321       1234 799999999   567


Q ss_pred             HHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          212 KTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       212 ~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                      +++++|+++|+++..+|.+++.+.++.+|++||+||.|||++...
T Consensus       227 ~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  271 (307)
T 1mpy_A          227 RAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGD  271 (307)
T ss_dssp             HHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCC
T ss_pred             HHHHHHHHCCCceeeCCccCCCCCceEEEEECCCCcEEEEEeccc
Confidence            778999999999988887765444578999999999999999754

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=100.00  E-value=1.3e-33  Score=229.61  Aligned_cols=232  Identities=16%  Similarity=0.175  Sum_probs=172.5

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeC--
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD--   78 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~--   78 (262)
                      |+||.|.|+|++++++||+++|||++..+..      ...++..+....  .+.+...       ...++.|++|.|+  
T Consensus         5 i~hv~l~v~Dl~~s~~FY~~~LG~~~~~~~~------~~~~~~~~~~~~--~l~~~~~-------~~~~~~~~~f~v~~~   69 (297)
T 1lgt_A            5 LGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRIDSRAW--RIAVQQG-------EVDDLAFAGYEVADA   69 (297)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSC--SEEEEEC-------TTCEEEEEEEEESSH
T ss_pred             EEEEEEEcCCHHHHHHHHHHccCCEEeecCC------CeEEEEeCCCcE--EEEEecC-------CCCCccEEEEEeCCH
Confidence            5799999999999999999999999987642      134555544322  2333321       1346789999999  


Q ss_pred             -CHHHHHHHHHHcCCeeecCCccc--CCCCeEEEEEECCCCCEEEEEEcCCC------------------CCCceeEEee
Q 024779           79 -DVAKTVELIKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLERGPT------------------PEPLCQVMLR  137 (262)
Q Consensus        79 -d~~~~~~~l~~~G~~~~~~~~~~--~~~~~~~~~~~DP~G~~iel~~~~~~------------------~~~~~~v~l~  137 (262)
                       |+++++++|+++|+++...+...  ..+..+.++|.||+||.|||++....                  +.++.|+.|.
T Consensus        70 ~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~l~hv~l~  149 (297)
T 1lgt_A           70 AGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGASEVFEKPFLPGAAVSGFLTGEQGLGHFVRC  149 (297)
T ss_dssp             HHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCCBCTTSCCCCSSSCSCBCCGGGCSCEEEEE
T ss_pred             HHHHHHHHHHHHCCCeEEeCCccccccCCceeEEEEECCCCCEEEEEECccccccCCccCCCcccccccCccccceEEEe
Confidence             89999999999999987655421  11356789999999999999986521                  1368999999


Q ss_pred             ecChhhhHHHHHHhcCCeeeeeccCc---CccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecCHHHHH
Q 024779          138 VGDLDRSINFYEQAFGMELLRKRDNP---EYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTA  214 (262)
Q Consensus       138 v~d~~~~~~FY~~~lG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~dl~~~~  214 (262)
                      |+|++++++||+++|||++......+   +......++..+.  .++.+.+...      +...+..|++|.|+|++++.
T Consensus       150 v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~l~~~------~~~~~~~hiaf~v~d~~~~~  221 (297)
T 1lgt_A          150 VPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNE--RHHTLAIAAF------PLPKRIHHFMLEVASLDDVG  221 (297)
T ss_dssp             CSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSS--BSCSEEEECC------CCSSSEEEEEEEBSCHHHHH
T ss_pred             cCCHHHHHHHHHHhcCCeeeeEEeccCCCCccceEEEEEeCC--CcceEEEEcC------CCCCCceEEEEeCCCHHHHH
Confidence            99999999999999999987542211   1112334554332  2344555431      12467899999999988877


Q ss_pred             ---HHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          215 ---EAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       215 ---~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                         ++ +++|+++..+|.+++.+..+++|++||+||.|||+....
T Consensus       222 ~~~~~-~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~  265 (297)
T 1lgt_A          222 FAFDR-VDADGLITSTLGRHTNDHMVSFYASTPSGVEVEYGWSAR  265 (297)
T ss_dssp             HHHHH-HHTTTCEEEEEEEESSSCCEEEEEECTTSCEEEEEECCC
T ss_pred             HHHHH-HhCCCcccccCcccCCCCcEEEEEECCCCcEEEEecCCE
Confidence               88 999999998887777655577999999999999998764

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=100.00  E-value=2.3e-33  Score=232.97  Aligned_cols=234  Identities=19%  Similarity=0.200  Sum_probs=179.9

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCC-
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD-   79 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d-   79 (262)
                      |+||.|.|+|++++++||+++|||+++.+.+      ..+++.......+..+.+...       ...++.|++|.|.+ 
T Consensus        18 l~hV~l~V~DLe~s~~FY~dvLGL~~~~~~~------~~~~lr~~~~~~~~~l~l~~~-------~~~gl~~~a~~v~s~   84 (365)
T 4ghg_A           18 CAYAELVVTDLAKSRNFYVDVLGLHVSYEDE------NQIYLRSFEEFIHHNLVLTKG-------PVAALKAMAFRVRTP   84 (365)
T ss_dssp             EEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEEC-------SSCEEEEEEEEESSH
T ss_pred             EEEEEEEeCCHHHHHHHHhhCCCCEEEEEcC------CEEEEEeCCCCcceEEEeccC-------CCCCcceEEEEeCCH
Confidence            5799999999999999999999999987753      356676654433434444432       22478899999985 


Q ss_pred             --HHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCC---------------CCCCceeEEeeecChh
Q 024779           80 --VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP---------------TPEPLCQVMLRVGDLD  142 (262)
Q Consensus        80 --~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~---------------~~~~~~~v~l~v~d~~  142 (262)
                        ++++.++|+++|+.+...+.....+.++.++|.||+|+.|||+....               .+.+++|++|.|+|++
T Consensus        85 ~dLd~~~~~L~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~rlgHV~L~v~D~~  164 (365)
T 4ghg_A           85 EDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFFETTHVERLHMRYDLYSAGELVRLDHFNQVTPDVP  164 (365)
T ss_dssp             HHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBCCCCCCTTCTTTCCTTCCCEEEEEEEEESCHH
T ss_pred             HHHHHHHHHHHHcCCcceeccccccCCCceEEEEECCCCCEEEEEEEeeccccccccccccccccCcceeEEEEeecCHH
Confidence              78899999999999875544443456678999999999999995332               1347999999999999


Q ss_pred             hhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecCHHH---HHHHHHH
Q 024779          143 RSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYK---TAEAIKL  219 (262)
Q Consensus       143 ~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~dl~~---~~~~l~~  219 (262)
                      ++..||++ |||++......+++.....++...+  .++.+.+..       ...++++|++|.|+|+++   +.++|++
T Consensus       165 ~t~~Fy~~-LGf~~sd~~~~~~g~~~~~f~~~~~--~hH~la~~~-------~~~~~lhHvaf~v~d~d~v~~~~d~l~~  234 (365)
T 4ghg_A          165 RGRKYLED-LGFRVTEDIQDDEGTTYAAWMHRKG--TVHDTALTG-------GNGPRLHHVAFSTHEKHNIIQICDKMGA  234 (365)
T ss_dssp             HHHHHHHH-TTCEEEEEEECTTSCEEEEEEESSS--SSCSEEEEE-------SSBSEEEEEEEECSSHHHHHHHHHHHHH
T ss_pred             HHHHHHHh-cCCEEEEEEecCCCceeEEeeecCC--cccceeeec-------CCCCceeEEEEecCCHHHHHHHHHHHHh
Confidence            99999965 9999987766555555666777543  456666553       134689999999998766   4568888


Q ss_pred             hCCe--eecCCccCCCCcceEEEEeCCCCcEEEEEecccc
Q 024779          220 FGGK--VTREPGPLPGINTKITACLDPDGWKTVFVDNVDF  257 (262)
Q Consensus       220 ~g~~--~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~  257 (262)
                      +|+.  +..+|++|..+...++|++||+||+||+.....+
T Consensus       235 ~g~~~~i~~GpgRH~~~~~~f~Y~~dP~G~~iE~~t~g~~  274 (365)
T 4ghg_A          235 LRISDRIERGPGRHGVSNAFYLYILDPDNHRIEIYTQDYY  274 (365)
T ss_dssp             TTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCCC
T ss_pred             CCCCceeEeCCCccCCCCcEEEEEECCCCceEEEEcCCcC
Confidence            9985  5578888877767889999999999999887654

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=100.00  E-value=1.1e-33  Score=230.25  Aligned_cols=233  Identities=11%  Similarity=0.111  Sum_probs=170.6

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEE-EecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCC
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLR-KRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD   79 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d   79 (262)
                      |+||.|.|+|++++++||+++|||++.. +..      ...++..+....  .+.+...       ...++.|++|.|++
T Consensus         6 i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~------~~~~~~~~~~~~--~l~l~~~-------~~~~~~~~~~~v~~   70 (300)
T 2zyq_A            6 LGYLRIEATDMAAWREYGLKVLGMVEGKGAPE------GALYLRMDDFPA--RLVVVPG-------EHDRLLEAGWECAN   70 (300)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTSCCEECSSCCS------SCEEEESSSSSC--SEEEEEC-------SSCEEEEEEEECSS
T ss_pred             EEEEEEEeCCHHHHHHHHHHccCCEEeccCCC------CeEEEEeCCCcE--EEEEecC-------CCCCcceEEEEeCC
Confidence            5799999999999999999999999875 321      234555544322  2344332       13467899999975


Q ss_pred             ---HHHHHHHHHHcCCeeecCCccc--CCCCeEEEEEECCCCCEEEEEEc-CCC---------------CCCceeEEeee
Q 024779           80 ---VAKTVELIKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLER-GPT---------------PEPLCQVMLRV  138 (262)
Q Consensus        80 ---~~~~~~~l~~~G~~~~~~~~~~--~~~~~~~~~~~DP~G~~iel~~~-~~~---------------~~~~~~v~l~v  138 (262)
                         +++++++|+++|+++..++...  ..+..+.++|.||+||.|||++. ...               +.+++|+.|.|
T Consensus        71 ~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~l~hv~l~v  150 (300)
T 2zyq_A           71 AEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRFADPSGNCLEVFHGTALEHRRVVSPYGHRFVTGEQGMGHVVLST  150 (300)
T ss_dssp             HHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTCCEEEEEECCCCCCSCCCCTTCCCBCCGGGCSCEEEEEC
T ss_pred             HHHHHHHHHHHHHcCCeEEeCChhhcccccceEEEEEECCCCCEEEEEEcCCcCCCCCccCCCcccccCCCccCeEEEEe
Confidence               8899999999999987655431  11356788999999999999987 211               24689999999


Q ss_pred             cChhhhHHHHHHhcCCeeeeeccCc--------Cc-cceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecC
Q 024779          139 GDLDRSINFYEQAFGMELLRKRDNP--------EY-KYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDD  209 (262)
Q Consensus       139 ~d~~~~~~FY~~~lG~~~~~~~~~~--------~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~d  209 (262)
                      +|++++++||+++|||++......+        ++ .....++..++  .+..+.+...      +...+..|++|.|+|
T Consensus       151 ~D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~--~~~~~~~~~~------~~~~g~~h~af~v~d  222 (300)
T 2zyq_A          151 RDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNP--RHHSLAFLPM------PTSSGIVHLMVEVEQ  222 (300)
T ss_dssp             SCHHHHHHHHHTTTCCEEEEEEEECGGGGTCCTTSCCEEEEEEESSS--BSCSEEEESS------CCSSSEEEEEEEBSS
T ss_pred             CCHHHHHHHHHHhcCCEEeeeecccccccccCCCCCceEEEEEEECC--CccEEEEecC------CCCCCceEEEEEeCC
Confidence            9999999999999999987543211        11 12334444332  2334555431      124578999999998


Q ss_pred             HHH---HHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          210 VYK---TAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       210 l~~---~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                      +++   ++++|+++|+++..+|.+++.+.++++|++||+||.|||+....
T Consensus       223 ~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~~  272 (300)
T 2zyq_A          223 ADDVGLCLDRALRRKVPMSATLGRHVNDLMLSFYMKTPGGFDIEFGCEGR  272 (300)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEEEESSSCCEEEEEECTTSSEEEEEECCC
T ss_pred             HHHHHHHHHHHHHCCCceeecccccCCCCeEEEEEECCCCCEEEEEeCCe
Confidence            665   59999999999998887766655688999999999999998654

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=100.00  E-value=2.2e-33  Score=227.69  Aligned_cols=232  Identities=13%  Similarity=0.146  Sum_probs=170.0

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeC--
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD--   78 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~--   78 (262)
                      |+||.|.|+|++++++||+++|||++..+..      ...++..+.....  +.+...       ...++.|++|.|+  
T Consensus         5 i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~------~~~~l~~~~~~~~--l~~~~~-------~~~~~~~~~f~v~~~   69 (292)
T 1kw3_B            5 LGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYRADQRAWR--IAVQPG-------ELDDLAYAGLEVDDA   69 (292)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCS--EEEEEC-------TTCEEEEEEEECSSH
T ss_pred             EEEEEEEeCCHHHHHHHHHhcCCCEEeecCC------CeEEEEcCCceEE--EEEccC-------CCCCccEEEEEECCH
Confidence            5799999999999999999999999987642      1345555443222  233221       1246789999998  


Q ss_pred             -CHHHHHHHHHHcCCeeecCCccc--CCCCeEEEEEECCCCCEEEEEEcCCC------------------CCCceeEEee
Q 024779           79 -DVAKTVELIKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLERGPT------------------PEPLCQVMLR  137 (262)
Q Consensus        79 -d~~~~~~~l~~~G~~~~~~~~~~--~~~~~~~~~~~DP~G~~iel~~~~~~------------------~~~~~~v~l~  137 (262)
                       |+++++++|+++|+++..++...  ..+..+.++|.||+||.|||++....                  ..+++|+.|.
T Consensus        70 ~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~l~hv~l~  149 (292)
T 1kw3_B           70 AALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGPAEIFHEPFLPSAPVSGFVTGDQGIGHFVRC  149 (292)
T ss_dssp             HHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCCBCTTSCCCCSSSCCCBCCGGGCSCEEEEE
T ss_pred             HHHHHHHHHHHHcCCeEeecCcccccccCceEEEEEECCCCCEEEEEECccccccCCCCCCCCccccccCCcccceEEEe
Confidence             89999999999999987665431  11356788999999999999976421                  1368999999


Q ss_pred             ecChhhhHHHHHHhcCCeeeeeccCc--Cc-cceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecCHHH--
Q 024779          138 VGDLDRSINFYEQAFGMELLRKRDNP--EY-KYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYK--  212 (262)
Q Consensus       138 v~d~~~~~~FY~~~lG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~dl~~--  212 (262)
                      |+|++++++||+++|||++......+  ++ .....++..++  .+..+.+...      +..++.+|++|.|+|+++  
T Consensus       150 v~D~~~a~~FY~~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~------~~~~~~~hiaf~v~d~~~v~  221 (292)
T 1kw3_B          150 VPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNG--RHHTIALAAF------PIPKRIHHFMLQANTIDDVG  221 (292)
T ss_dssp             CSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSS--BSCSEEEECC------SCSSSEEEEEEEBSSHHHHH
T ss_pred             cCCHHHHHHHHHhccCCEEeeeeecccCCCccceEEEEEECC--CcceEEEecC------CCCCceEEEEEEcCCHHHHH
Confidence            99999999999999999987543211  11 12334444332  2333444421      113678999999998765  


Q ss_pred             -HHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCc-EEEEEeccc
Q 024779          213 -TAEAIKLFGGKVTREPGPLPGINTKITACLDPDGW-KTVFVDNVD  256 (262)
Q Consensus       213 -~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~-~ie~~~~~~  256 (262)
                       ++++|+ +|+++..+|.+++.+..+++|++||+|| .|||.....
T Consensus       222 ~~~~~l~-~G~~~~~~p~~~~~~~~~~~y~~DPdG~~~iEl~~~~~  266 (292)
T 1kw3_B          222 YAFDRLD-AAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWGPR  266 (292)
T ss_dssp             HHHHHHH-HTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEECCC
T ss_pred             HHHHHHh-CCCceeecCcccCCCCeEEEEEECCCCCeeEEEEECCE
Confidence             667999 9999998887777655578899999999 999998764

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=100.00  E-value=1.3e-33  Score=230.33  Aligned_cols=234  Identities=15%  Similarity=0.165  Sum_probs=170.6

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeC--
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD--   78 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~--   78 (262)
                      |+||.|.|+|++++++||+++|||++.....  .   ...++..+....  .+.+....       ..++.|++|.|+  
T Consensus         7 i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~---~~~~~~~~~~~~--~l~l~~~~-------~~~~~~~~f~v~~~   72 (305)
T 2wl9_A            7 LGYLGLSVSNLDAWRDYAAGIMGMQVVDDGE--D---DRIYLRMDRWHH--RIVLHADG-------SDDLAYIGWRVAGP   72 (305)
T ss_dssp             EEEEEEECSCHHHHHHHHTTTTCCEEECCSC--T---TEEEEECSSBSC--SEEEECSS-------CCEEEEEEEECSSH
T ss_pred             eeEEEEEeCCHHHHHHHHHhccCCEEeeccC--C---CeEEEEeCCCeE--EEEEEECC-------CCCeEEEEEEECCH
Confidence            5799999999999999999999999875211  1   234555554222  23443221       346789999997  


Q ss_pred             -CHHHHHHHHHHcCCeeecCCccc--CCCCeEEEEEECCCCCEEEEEEc-CC------------------CCCCceeEEe
Q 024779           79 -DVAKTVELIKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLER-GP------------------TPEPLCQVML  136 (262)
Q Consensus        79 -d~~~~~~~l~~~G~~~~~~~~~~--~~~~~~~~~~~DP~G~~iel~~~-~~------------------~~~~~~~v~l  136 (262)
                       |+++++++|+++|+++..+|...  ..+..+.++|.||+||.|||++. ..                  ...+++|+.|
T Consensus        73 ~dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~hv~l  152 (305)
T 2wl9_A           73 VELDELAEQLKNAGIPFEVASDADAAERRVLGLVKLHDPGGNPTEIFYGPQVDTSSPFHPGRPMFGKFVTEGQGLGHIII  152 (305)
T ss_dssp             HHHHHHHHHHHHTTCCCEECCHHHHHHTTEEEEEEEECTTCCEEEEEEEECBCTTSCCCCSSCCSSCBCCTTTCSCEEEE
T ss_pred             HHHHHHHHHHHHCCCceEeCCcccccccCcEEEEEEECCCCCEEEEEECCCccCCCCcCCCCCcccceecCCceeeeEEE
Confidence             69999999999999987666532  22457889999999999999976 21                  1137899999


Q ss_pred             eecChhhhHHHHHHhcCCeeeeeccCc--Cc-cceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecC---H
Q 024779          137 RVGDLDRSINFYEQAFGMELLRKRDNP--EY-KYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDD---V  210 (262)
Q Consensus       137 ~v~d~~~~~~FY~~~lG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~d---l  210 (262)
                      .|+|++++++|| ++|||++......+  ++ .....++..++  .++.+.+...      ...++..|++|.|+|   +
T Consensus       153 ~v~D~~~s~~FY-~vLG~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~------~~~~~~~hiaf~v~d~~~v  223 (305)
T 2wl9_A          153 REDDVEEATRFY-RLLGLEGAVEYKFALPNGAVGTPVFMHCND--RHHSLAFGVG------PMDKRINHLMIEYTHLDDL  223 (305)
T ss_dssp             CCSCHHHHHHHH-HHHTCEEEECBCEECTTSCEECCEEEESSS--SSCSEEECCS------CCSSSEEEEEEEESSHHHH
T ss_pred             ECCCHHHHHHHH-HHcCCeeeeeEecccCCCccceEEEEEcCC--CceEEEEecC------CCCCCceEEEEEcCCHHHH
Confidence            999999999999 99999986542211  11 12334444332  2333444321      123678999999998   5


Q ss_pred             HHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecccc
Q 024779          211 YKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDF  257 (262)
Q Consensus       211 ~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~  257 (262)
                      ++++++|+++|+++..+|.+++.+..+++|++||+||.|||+.....
T Consensus       224 ~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~~~  270 (305)
T 2wl9_A          224 GYAHDLVRQQKIDVTLQIGKHSNDEALTFYCANPSGWLWEPGWGSRP  270 (305)
T ss_dssp             HHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECCCC
T ss_pred             HHHHHHHHHcCCCccccCcccCCCCcEEEEEECCCCCEEEEEeCCEE
Confidence            66888999999999988877766545789999999999999987643

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=100.00  E-value=8.9e-33  Score=228.54  Aligned_cols=241  Identities=15%  Similarity=0.105  Sum_probs=166.3

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecC-CCCcceeeEeeecCCCceeEEEeeecCCCCC-CCCCCCceeEEEEeC
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDI-PEEKYTNAFLGYGPEDSHFVIELTYNYGVDK-YDIGTGFGHFGIAVD   78 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~i~~~v~   78 (262)
                      |+||.|.|+|+++|++||+++|||++...... ........++..+.......+.+........ .....++.|++|.|+
T Consensus        31 i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~hiaf~v~  110 (338)
T 1zsw_A           31 HHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIGLLVP  110 (338)
T ss_dssp             EEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEEEEES
T ss_pred             ccEEEEEcCCHHHHHHHHHHhcCCEEEEeecccCCCceEEEEEcCCCCCCCCEEEEEECCCCccCcCCCCCeeeEEEEcC
Confidence            57999999999999999999999998865411 1111111222222111223455444222111 122346889999998


Q ss_pred             ---CHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCCC------------------CCCceeEEee
Q 024779           79 ---DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT------------------PEPLCQVMLR  137 (262)
Q Consensus        79 ---d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~~------------------~~~~~~v~l~  137 (262)
                         |+++++++|+++|+++..++.  .. +.+.++|.|||||.|||++....                  ..++.|+.|.
T Consensus       111 ~~~dld~~~~~l~~~G~~~~~~~~--~~-G~~~~~f~DPdG~~iel~~~~~~~~~~~~p~~~~~~~~~~~~~~l~hv~l~  187 (338)
T 1zsw_A          111 SEDSLHYWKERFEKFDVKHSEMTT--YA-NRPALQFEDAEGLRLVLLVSNGEKVEHWETWEKSEVPAKHQIQGMGSVELT  187 (338)
T ss_dssp             CHHHHHHHHHHHHHTTCEECCSEE--ET-TEEEEEEECTTCCEEEEEECTTCCCTTCCCCTTCSSCGGGSCCEEEEEEEE
T ss_pred             CHHHHHHHHHHHHHCCCccccccc--cC-CcEEEEEECCCCCEEEEEEcCCccccccCcCcCCCCCccccCceEEEEEEE
Confidence               699999999999999876543  23 34889999999999999987531                  1368899999


Q ss_pred             ecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCc-ceEEEEeeecCCccccc-CCceeEEEEEec---CHHH
Q 024779          138 VGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDK-NVVLELTYNYGVTDYDK-GNAYAQIAIGTD---DVYK  212 (262)
Q Consensus       138 v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~-~~~~~~i~~~v~---dl~~  212 (262)
                      |+|++++++||+++|||++.....  +  +  ..+..++.+. ...+.+..  ....... ..+..|++|.|+   |+++
T Consensus       188 v~Dl~~a~~FY~~~LG~~~~~~~~--~--~--~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~hiaf~v~~~~dv~~  259 (338)
T 1zsw_A          188 VRRLDKMASTLTEIFGYTEVSRND--Q--E--AIFQSIKGEAFGEIVVKYL--DGPTEKPGRGSIHHLAIRVKNDAELAY  259 (338)
T ss_dssp             ESCHHHHHHHHHHTTCCEEEEECS--S--E--EEEESSTTCSTTCEEEEEC--CSSBCBCCBTCEEEEEEEESSHHHHHH
T ss_pred             ECCHHHHHHHHHHhcCCEEEeecC--C--e--EEEEecCCCCceEEEEecc--CCCCCCCCCCceEEEEEEeCCHHHHHH
Confidence            999999999999999999976543  1  2  2222221111 12333322  1111112 246899999998   7999


Q ss_pred             HHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecc
Q 024779          213 TAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNV  255 (262)
Q Consensus       213 ~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  255 (262)
                      ++++|+++|+++. +|....+  .+.+|++|||||.|||++..
T Consensus       260 ~~~~l~~~G~~~~-~~~~~~~--~~~~~~~DPdG~~iEl~~~~  299 (338)
T 1zsw_A          260 WEEQVKQRGFHSS-GIIDRFY--FKSLYFRESNGILFEIATDG  299 (338)
T ss_dssp             HHHHHHHTTCCCC-CCEECSS--EEEEEEECTTCCEEEEEEEE
T ss_pred             HHHHHHHCCCcee-eeeecCc--eEEEEEECCCCCEEEEEEcC
Confidence            9999999999985 5555433  58899999999999999865

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=100.00  E-value=1.2e-32  Score=224.38  Aligned_cols=233  Identities=14%  Similarity=0.104  Sum_probs=167.0

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeC--
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD--   78 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~--   78 (262)
                      |+||.|.|+|++++++||+++|||++..+..  .   ...++..+.....  +.+...       ...++.|++|.|.  
T Consensus        10 i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~---~~~~~~~~~~~~~--l~l~~~-------~~~~~~~~~~~v~~~   75 (302)
T 2ehz_A           10 LGYMGISVKDPDAWKSFATDMLGLQVLDEGE--K---DRFYLRMDYWHHR--IVVHHN-------GQDDLEYLGWRVAGK   75 (302)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTTCCEEECCSC--S---SEEEEESSSBSCS--EEEESS-------CCSEEEEEEEEESSH
T ss_pred             eeEEEEEeCCHHHHHHHHHhcCCCEEEeccC--C---cceEEEeCCCceE--EEEecC-------CCCCeeEEEEEECCH
Confidence            5799999999999999999999999875421  1   2345554332222  333321       1236789999995  


Q ss_pred             -CHHHHHHHHHHcCCeeecCCcccC--CCCeEEEEEECCCCCEEEEEEcCC----C--------C-------CCceeEEe
Q 024779           79 -DVAKTVELIKAKGGKVTREPGPVK--GGNTVIAFIEDPDGYKFELLERGP----T--------P-------EPLCQVML  136 (262)
Q Consensus        79 -d~~~~~~~l~~~G~~~~~~~~~~~--~~~~~~~~~~DP~G~~iel~~~~~----~--------~-------~~~~~v~l  136 (262)
                       |+++++++|+++|+++..++....  .+..+.++|.||+||.|||++..+    .        +       .+++|+.|
T Consensus        76 ~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~hv~l  155 (302)
T 2ehz_A           76 PEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTEDPGGNPTEIFWGPRIDMSNPFHPGRPLHGKFVTGDQGLGHCIV  155 (302)
T ss_dssp             HHHHHHHHHHHHTTCCCEECCHHHHHHHTEEEEEEEECTTSCEEEEEEEECBCTTSCCCCSSCCSSCBCCGGGCSCEEEE
T ss_pred             HHHHHHHHHHHHCCCcEEECCccccccccceEEEEEECCCCCEEEEEECCCccCCCCccCCCCcccceecCCCccceEEE
Confidence             689999999999999876654321  135688899999999999997521    1        1       17899999


Q ss_pred             eecChhhhHHHHHHhcCCeeeeeccCc--Cc-cceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecCHHH-
Q 024779          137 RVGDLDRSINFYEQAFGMELLRKRDNP--EY-KYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYK-  212 (262)
Q Consensus       137 ~v~d~~~~~~FY~~~lG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~dl~~-  212 (262)
                      .|+|++++++|| ++|||++......+  ++ .....++..+.  ....+.+...      +..++..|++|.|+|+++ 
T Consensus       156 ~v~D~~~a~~FY-~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~------~~~~~~~hiaf~v~d~~~v  226 (302)
T 2ehz_A          156 RQTDVAEAHKFY-SLLGFRGDVEYRIPLPNGMTAELSFMHCNA--RDHSIAFGAM------PAAKRLNHLMLEYTHMEDL  226 (302)
T ss_dssp             CCSCHHHHHHHH-HHTTCBCCEEEEEECTTSCEEEEEEEBSSS--BSCSEEECSC------CCSSSEEEEEEEESSHHHH
T ss_pred             EcCCHHHHHHHH-HhcCCeeeeEEeccCCCCcceEEEEEEeCC--CCcEEEEecC------CCCCceeEEEEEcCCHHHH
Confidence            999999999999 99999986432211  11 12334444332  2233443321      123578999999998765 


Q ss_pred             --HHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          213 --TAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       213 --~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                        ++++|+++|+++..+|.+++.+..+++|++||+||.|||+....
T Consensus       227 ~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~~  272 (302)
T 2ehz_A          227 GYTHQQFVKNEIDIALQLGIHANDKALTFYGATPSGWLIEPGWRGA  272 (302)
T ss_dssp             HHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECCC
T ss_pred             HHHHHHHHHCCCcEEeCCcccCCCCceEEEEECCCCcEEEEEECce
Confidence              66799999999998887776655578999999999999988654

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.97  E-value=6.4e-30  Score=212.82  Aligned_cols=247  Identities=18%  Similarity=0.205  Sum_probs=175.7

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCC------CCCCCCceeEE
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDK------YDIGTGFGHFG   74 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~------~~~~~~~~~i~   74 (262)
                      |+||.|.|+|++++.+||+++|||+++.+....++  ....+..++  .  .+.+..+..+..      ...+.++.+++
T Consensus         6 l~hv~~~v~D~~~a~~fy~~~LGf~~~~~~~~~~g--~~~~~~~g~--~--~l~l~~~~~~~~~~~~~~~~~g~g~~~ia   79 (357)
T 2r5v_A            6 IDYVEMYVENLEVAAFSWVDKYAFAVAGTSRSADH--RSIALRQGQ--V--TLVLTEPTSDRHPAAAYLQTHGDGVADIA   79 (357)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTE--EEEEEEETT--E--EEEEEEESSTTSHHHHHHHHHSSEEEEEE
T ss_pred             EEEEEEEECCHHHHHHHHHHcCCCeEEEEEcCCCc--eEEEEEeCC--E--EEEEeCCCCCCCHHHHHHHhcCCeEEEEE
Confidence            58999999999999999999999999876532222  233333332  2  345544211111      11356899999


Q ss_pred             EEeCCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCCC-----------------------CCCc
Q 024779           75 IAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT-----------------------PEPL  131 (262)
Q Consensus        75 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~~-----------------------~~~~  131 (262)
                      |.|+|+++++++++++|+++..+|.....|....+.+.+|+|..++|+++...                       ..++
T Consensus        80 f~V~D~~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~~p~g~~~~lv~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~l  159 (357)
T 2r5v_A           80 MATSDVAAAYEAAVRAGAEAVRAPGQHSEAAVTTATIGGFGDVVHTLIQRDGTSAELPPGFTGSMDVTNHGKGDVDLLGI  159 (357)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEEEEECCC-CCCCEEEEECSTTCEEEEEECCSSSCCCCTTCEECSCCCCTTCTTCCCCEE
T ss_pred             EEECCHHHHHHHHHHcCCeEeECcEecCCCeEEEEEEeccCCeEEEEEecccCCCCCCCCCcccCcccccCCCCCCcceE
Confidence            99999999999999999998876654333455678889999999999975210                       1258


Q ss_pred             eeEEeeec--ChhhhHHHHHHhcCCeeeeecc--CcCccceeeeeccCCCCcceEEEEeeecCCc--c-------cccCC
Q 024779          132 CQVMLRVG--DLDRSINFYEQAFGMELLRKRD--NPEYKYTIAMMGYGPEDKNVVLELTYNYGVT--D-------YDKGN  198 (262)
Q Consensus       132 ~~v~l~v~--d~~~~~~FY~~~lG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~-------~~~~~  198 (262)
                      +|+++.|+  |++++.+||+++|||++....+  .+.......++...  ++...++|.+.....  .       ...++
T Consensus       160 ~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~--~g~~~l~l~~~~~~~~~~~~~~~~~~~~~~  237 (357)
T 2r5v_A          160 DHFAICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSA--SGAVTLTLIEPDRNADPGQIDEFLKDHQGA  237 (357)
T ss_dssp             EEEEEECCTTCHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECT--TSCCEEEEEEECTTSBCCHHHHHHHHHTSS
T ss_pred             eEEEEEEchhhHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECC--CCCEEEEEeeecCCCCCchhHHHHHhcCCC
Confidence            99999999  9999999999999999875432  12222233445432  245677777643211  1       11357


Q ss_pred             ceeEEEEEecCHHHHHHHHHHhCCeeecCCccC-------C--CCc-------ceEEEEeCCCCcEEEEEecc
Q 024779          199 AYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPL-------P--GIN-------TKITACLDPDGWKTVFVDNV  255 (262)
Q Consensus       199 ~~~~i~~~v~dl~~~~~~l~~~g~~~~~~~~~~-------~--~~~-------~~~~~~~DP~G~~ie~~~~~  255 (262)
                      +++||+|.|+|+++++++|+++|++++..|...       .  .+.       ..++|.+||+|++|+|+..+
T Consensus       238 g~~Hiaf~v~Di~~~~~~L~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l~~~Dp~G~llqi~t~~  310 (357)
T 2r5v_A          238 GVQHIAFNSNDAVRAVKALSERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVLADEDHGGQLFQIFTAS  310 (357)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCEEEEETTEEEEEEEBCC
T ss_pred             CccEEEEEcCCHHHHHHHHHHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeEEecCCCceEEEEEccC
Confidence            999999999999999999999999998876221       0  000       13799999999999999854

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.96  E-value=9.6e-28  Score=200.90  Aligned_cols=249  Identities=19%  Similarity=0.258  Sum_probs=174.7

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCC--cceeeEeeecCCCceeEEEeeecCCCCCC----------CCCC
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEE--KYTNAFLGYGPEDSHFVIELTYNYGVDKY----------DIGT   68 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~----------~~~~   68 (262)
                      |+||.|.|+|++++.+||+++|||+++.+...+.+  ......+..++    ..+++..+..+...          ..+.
T Consensus        23 i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g~----~~l~l~~~~~~~~~~~~~~~~~~~~~g~   98 (381)
T 1t47_A           23 MDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGS----ARFVLTSVIKPATPWGHFLADHVAEHGD   98 (381)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETT----EEEEEEEESSCCSHHHHHHHHHHHHHCS
T ss_pred             EEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecCC----EEEEEecCCCCCCcchhHHHHHHHhcCC
Confidence            57999999999999999999999999886432222  22344444332    34555543211111          1357


Q ss_pred             CceeEEEEeCCHHHHHHHHHHcCCeeecCCccc--CCCCeEEEEEECCCCCEEEEEEcC-------C------C------
Q 024779           69 GFGHFGIAVDDVAKTVELIKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLERG-------P------T------  127 (262)
Q Consensus        69 ~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~--~~~~~~~~~~~DP~G~~iel~~~~-------~------~------  127 (262)
                      ++.|++|.|+|+++++++++++|+++..+|...  ..|..+.+.+.+|+|+.++|+++.       +      .      
T Consensus        99 gv~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~~~~~~~f~p~~~~~~~~~~~~~  178 (381)
T 1t47_A           99 GVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTGYDGPYLPGYVAAAPIVEPPA  178 (381)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEEECSSSSTTCEECCCSSCCCS
T ss_pred             ceEEEEEEECCHHHHHHHHHHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEecCCCCCCCCCCCccccccccCCC
Confidence            899999999999999999999999998776542  223346788899999999999752       1      0      


Q ss_pred             ---CCCceeEEeeec--ChhhhHHHHHHhcCCeeeeecc-----CcCccceeeeeccCCCCcceEEEEeeecC-Ccc---
Q 024779          128 ---PEPLCQVMLRVG--DLDRSINFYEQAFGMELLRKRD-----NPEYKYTIAMMGYGPEDKNVVLELTYNYG-VTD---  193 (262)
Q Consensus       128 ---~~~~~~v~l~v~--d~~~~~~FY~~~lG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~---  193 (262)
                         ..+++|++++|+  |++++.+||+++|||++....+     .+.......++..  ..+...+.|.+... ...   
T Consensus       179 ~~~~~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~i~~~~~~~~~~~l~~--~~g~v~i~l~~~~~~~~~s~~  256 (381)
T 1t47_A          179 HRTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVAD--GTLKVKFPINEPALAKKKSQI  256 (381)
T ss_dssp             SCSCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEEC--TTSCSEEEEEEECCSSSCCHH
T ss_pred             CCCceEEeEEEEeeccccHHHHHHHHHHhhCCEEeeecCcceeccCCccEEEEEEEC--CCCcEEEEEecCCcCCCccHH
Confidence               136899999999  9999999999999999876532     1222223333332  22346677766431 111   


Q ss_pred             -----cccCCceeEEEEEecCHHHHHHHHHHhCCeeecCCccCC---------CC-------cceEEEEeCCCCcEEEEE
Q 024779          194 -----YDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLP---------GI-------NTKITACLDPDGWKTVFV  252 (262)
Q Consensus       194 -----~~~~~~~~~i~~~v~dl~~~~~~l~~~g~~~~~~~~~~~---------~~-------~~~~~~~~DP~G~~ie~~  252 (262)
                           ...++|++||||.|+|+.+++++|+++|++++..|..--         .+       ...++|-+||+|.++.++
T Consensus       257 ~~~l~~~~g~Gv~HiAf~vdDi~~~~~~L~~~Gv~~~~~p~~Yy~~l~~R~~~~~~~~~~l~~~~il~d~d~~g~llqif  336 (381)
T 1t47_A          257 DEYLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDSYYDTLGEWVGDTRVPVDTLRELKILADRDEDGYLLQIF  336 (381)
T ss_dssp             HHHHHHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCCGGGTTSHHHHHCCCSSCHHHHHHHTCEEEECSSCEEEEEE
T ss_pred             HHHHHHhCCCCcceEEEecCCHHHHHHHHHHcCCccCCCCccHHHHHHHhccccchhHHHHHHhCeEEeeCCCCeEEEEe
Confidence                 124679999999999999999999999999988763210         00       013577789999888887


Q ss_pred             ecc
Q 024779          253 DNV  255 (262)
Q Consensus       253 ~~~  255 (262)
                      ..+
T Consensus       337 t~~  339 (381)
T 1t47_A          337 TKP  339 (381)
T ss_dssp             BCC
T ss_pred             ccC
Confidence            654

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.95  E-value=1.9e-26  Score=191.58  Aligned_cols=222  Identities=17%  Similarity=0.272  Sum_probs=163.3

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcc--eeeEeeecCCCceeEEEeeecCCCCC-------CCCCCCce
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKY--TNAFLGYGPEDSHFVIELTYNYGVDK-------YDIGTGFG   71 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~-------~~~~~~~~   71 (262)
                      |+||.|.|+|++++.+||+++|||++....+.+.+..  ..+.+..++    ..+++..+..+..       ...+.|+.
T Consensus        12 i~Hv~i~V~d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~G~----i~~~L~~p~~p~s~~~a~fl~~hG~Gv~   87 (393)
T 3isq_A           12 FHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQGK----IVFVLSSALNPWNKEMGDHLVKHGDGVK   87 (393)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETT----EEEEEEEESSTTCHHHHHHHHHHCSEEE
T ss_pred             EeEEEEEECCHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEEEEecCC----EEEEEecCCCCCchHHHHHHHhcCCcEE
Confidence            5899999999999999999999999998755443322  233444332    2455554322211       11467899


Q ss_pred             eEEEEeCCHHHHHHHHHHcCCeeecCCcccCC--CCeEEEEEECCCCCEEEEEEcCC-----------C----------C
Q 024779           72 HFGIAVDDVAKTVELIKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLERGP-----------T----------P  128 (262)
Q Consensus        72 ~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~--~~~~~~~~~DP~G~~iel~~~~~-----------~----------~  128 (262)
                      |++|.|+|+++++++++++|+++..+|.....  |......+.+|+|..+.|++...           .          +
T Consensus        88 ~iAf~VdDvdaa~~ra~a~Ga~~v~eP~~~~~~~G~v~~a~I~~~Gd~~h~lVdr~~y~~~flpg~~~~~~~~~~~~~~~  167 (393)
T 3isq_A           88 DIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLVEKMNYIGQFLPGYEAPAFMDPLLPKLP  167 (393)
T ss_dssp             EEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESCCSSSCTTCBSCSCCCTTGGGSC
T ss_pred             EEEEEeCCHHHHHHHHHHCCCeEecCccccccCCceeEEEEEEeCCCcEEEEeccccCcCCCCCCccccccccccccCCC
Confidence            99999999999999999999999988865533  33567778999999999987421           0          1


Q ss_pred             ----CCceeEEeeecC--hhhhHHHHHHhcCCeeeeecc---C--cCccceeeeeccCCCCcceEEEEeeecCCcc----
Q 024779          129 ----EPLCQVMLRVGD--LDRSINFYEQAFGMELLRKRD---N--PEYKYTIAMMGYGPEDKNVVLELTYNYGVTD----  193 (262)
Q Consensus       129 ----~~~~~v~l~v~d--~~~~~~FY~~~lG~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----  193 (262)
                          .+|+|++++|+|  ++++.+||+++|||+.....+   .  +........+..  ..+...++|.+......    
T Consensus       168 ~~~l~~IDHv~i~V~~~~l~~a~~fY~~~lGf~~~~~~d~~~i~~~~~gl~s~~~~~--~~g~v~i~L~ep~~~~~~s~I  245 (393)
T 3isq_A          168 KCSLEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVAN--YEESIKMPINEPAPGKKKSQI  245 (393)
T ss_dssp             CCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEECTTTSBCSSCEEEEEEEEC--TTSSCEEEEEEEECCSBCCHH
T ss_pred             CCCeeEEeEEEEecCccHHHHHHHHHHHHhCCEEeccccccccccCCCcEEEEEEEC--CCCCEEEEEecCCCCCCCCHH
Confidence                258999999998  999999999999999876543   1  112233333432  33567888887543111    


Q ss_pred             -----cccCCceeEEEEEecCHHHHHHHHHHhCCeeecCC
Q 024779          194 -----YDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREP  228 (262)
Q Consensus       194 -----~~~~~~~~~i~~~v~dl~~~~~~l~~~g~~~~~~~  228 (262)
                           ...|+|++||||.|+|+.+++++|+++|++++..|
T Consensus       246 ~~fL~~~~G~Gi~HiA~~~dDi~~~~~~l~~~Gv~~l~~P  285 (393)
T 3isq_A          246 QEYVDYNGGAGVQHIALKTEDIITAIRHLRERGLEFLSVP  285 (393)
T ss_dssp             HHHHHHHTSSEEEEEEEEESCHHHHHHHHHHTTCCBCCCC
T ss_pred             HHHHHHcCCCCcceEEEEcCCHHHHHHHHHHcCCccCCCC
Confidence                 12478999999999999999999999999999876

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.95  E-value=3.8e-26  Score=192.74  Aligned_cols=221  Identities=17%  Similarity=0.244  Sum_probs=154.5

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCC--cceeeEeeecCCCceeEEEeeecCCCC----------------
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEE--KYTNAFLGYGPEDSHFVIELTYNYGVD----------------   62 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~----------------   62 (262)
                      |+||.|.|+|+++|.+||+++|||+++.+...+.+  .....++..+  .  ..+.+..+..+.                
T Consensus        26 i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g--~--~~l~L~~~~~~~~~~~~~~~~~~~p~~~  101 (424)
T 1sqd_A           26 FHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSG--D--LRFLFTAPYSPSLSAGEIKPTTTASIPS  101 (424)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEET--T--EEEEEEEECCGGGTTTCCGGGCCCSSTT
T ss_pred             EEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcCC--C--EEEEEecCCCCccccccccccccccccc
Confidence            57999999999999999999999999877543322  2233444433  2  244554431110                


Q ss_pred             ---C------CCCCCCceeEEEEeCCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCCC------
Q 024779           63 ---K------YDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT------  127 (262)
Q Consensus        63 ---~------~~~~~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~~------  127 (262)
                         .      ...+.|+.|++|.|+|+++++++++++|+++..+|..... ......+.+|+|..++|+++...      
T Consensus       102 ~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l~a~Ga~~~~~P~~~~~-~~~~~~i~~~Gg~~~~lvd~~g~~~~~~~  180 (424)
T 1sqd_A          102 FDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNE-AVTIAEVKLYGDVVLRYVSYKAEDTEKSE  180 (424)
T ss_dssp             CCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT-TEEEEEEEEETTEEEEEEEECCC------
T ss_pred             ccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCcCCCC-ceEEEEEEcCCCcEEEEEecCCCCCCccc
Confidence               0      0134689999999999999999999999999877755432 34455556666666666643211      


Q ss_pred             -------------------CCCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCc-----cceeeeeccCCCCcceEE
Q 024779          128 -------------------PEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEY-----KYTIAMMGYGPEDKNVVL  183 (262)
Q Consensus       128 -------------------~~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~  183 (262)
                                         ..+|+|++++|+|++++.+||+++|||++....+.++.     +....++..  ..+...+
T Consensus       181 f~p~~~~~~~~~~~~~~~~~~~idHv~i~V~dl~~a~~FY~~~LGf~~~~~~~~~d~~~~~~gl~s~~l~~--~~g~~~l  258 (424)
T 1sqd_A          181 FLPGFERVEDASSFPLDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLAS--NDEMVLL  258 (424)
T ss_dssp             CCTTCEECCTTTCCCCCSSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEEC--TTSCSEE
T ss_pred             cCCCcccccccccCCCcCCcceEeeEEEeeCCHHHHHHHHHHhhCCeEEEEEcccccccccccceEEEEEc--CCCcEEE
Confidence                               12689999999999999999999999999877643321     223333432  2345778


Q ss_pred             EEeeecC---Ccc-------cccCCceeEEEEEecCHHHHHHHHHH----hCCeeecCC
Q 024779          184 ELTYNYG---VTD-------YDKGNAYAQIAIGTDDVYKTAEAIKL----FGGKVTREP  228 (262)
Q Consensus       184 ~l~~~~~---~~~-------~~~~~~~~~i~~~v~dl~~~~~~l~~----~g~~~~~~~  228 (262)
                      .|.+...   ...       ...++|++||||.|+|+.+++++|++    +|++++..|
T Consensus       259 ~l~e~~~~~~~~s~i~~fl~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~p  317 (424)
T 1sqd_A          259 PINEPVHGTKRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPSP  317 (424)
T ss_dssp             EEEEECCC---CCHHHHHHHHHTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCCC
T ss_pred             EEecccccCCCcchhhhhhhhcCCCCcCEEEEEeCCHHHHHHHHHhhhccCCcEEecCC
Confidence            8877531   111       12578999999999999999999999    899999865

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.94  E-value=2e-25  Score=188.02  Aligned_cols=221  Identities=16%  Similarity=0.178  Sum_probs=154.6

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCC--cceeeEeeecCCCceeEEEeeecCCCC-------------C--
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEE--KYTNAFLGYGPEDSHFVIELTYNYGVD-------------K--   63 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~-------------~--   63 (262)
                      |+||.|.|+|++++.+||++.|||+++.+...+.+  ....+++..++  .  .+++..+....             .  
T Consensus        32 l~hV~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G~--~--~l~L~~~~~~~~~~~~~p~~~~~~~~~  107 (418)
T 1sp8_A           32 FHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGS--L--SFLFTAPYAHGADAATAALPSFSAAAA  107 (418)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETT--E--EEEEEEECCSSCCGGGCSSTTCCHHHH
T ss_pred             EEEEEEEeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeCC--E--EEEEecCCCCcccccccccccccchhH
Confidence            58999999999999999999999999877543322  33444454443  2  34554432110             0  


Q ss_pred             ----CCCCCCceeEEEEeCCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCC-------------
Q 024779           64 ----YDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP-------------  126 (262)
Q Consensus        64 ----~~~~~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~-------------  126 (262)
                          ...+.|+.||+|.|+|+++++++++++|+++..+|....+ ......+.+|+|..+.|+++..             
T Consensus       108 ~~~~~~hg~gv~~iAf~V~Dv~~a~~~l~~~Ga~~~~~p~~~~~-~~~~~~i~~~Gg~~~~lvd~~~~~~~~~f~p~~~~  186 (418)
T 1sp8_A          108 RRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGR-GFRLAEVELYGDVVLRYVSYPDGAAGEPFLPGFEG  186 (418)
T ss_dssp             HHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEET-TEEEEEEEEETTEEEEEEECCTTGGGSSSSTTCEE
T ss_pred             HHHHhhcCCeeEEEEEEeCCHHHHHHHHHHCCCEEEeccccccC-ceEEEEEecCCCEEEEEEccCCCCCCcccCCCCcc
Confidence                0134689999999999999999999999998877654322 2344445566666666655431             


Q ss_pred             ------C---CCCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCc-----cceeeeeccCCCCcceEEEEeeecCC-
Q 024779          127 ------T---PEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEY-----KYTIAMMGYGPEDKNVVLELTYNYGV-  191 (262)
Q Consensus       127 ------~---~~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~-  191 (262)
                            .   ..+|+|++++|+|++++.+||+++|||++....+.++.     +....++...  .+...++|.+.... 
T Consensus       187 ~~~~~~~~~~~~~idHv~i~V~dl~~a~~FY~~vLGf~~~~~~~~~d~~~~~~gl~s~~l~~~--~g~i~l~l~e~~~~~  264 (418)
T 1sp8_A          187 VASPGAADYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANN--SENVLLPLNEPVHGT  264 (418)
T ss_dssp             CCCTTCCCCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECS--SSCCEEEEEEECCCS
T ss_pred             cCCCCCCCCCcceEeeEEEecCCHHHHHHHHHHHcCCEEEEEecccccccccccceEEEEEcC--CCcEEEEEeeccccc
Confidence                  0   12689999999999999999999999999876543221     2233344432  24577777765321 


Q ss_pred             --cc-------cccCCceeEEEEEecCHHHHHHHHHH----hCCeeecCC
Q 024779          192 --TD-------YDKGNAYAQIAIGTDDVYKTAEAIKL----FGGKVTREP  228 (262)
Q Consensus       192 --~~-------~~~~~~~~~i~~~v~dl~~~~~~l~~----~g~~~~~~~  228 (262)
                        ..       ...++|++||||.|+|+++++++|++    +|++++..|
T Consensus       265 ~~~s~i~~fl~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~P  314 (418)
T 1sp8_A          265 KRRSQIQTFLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP  314 (418)
T ss_dssp             SSCCHHHHHHHHHTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCC
T ss_pred             CCCcchhhhhhccCCCCcCEEEEEeCCHHHHHHHHhhhhccCCeEEccCC
Confidence              11       12578999999999999999999999    899999875

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.94  E-value=8.5e-26  Score=187.73  Aligned_cols=240  Identities=15%  Similarity=0.107  Sum_probs=163.1

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCC--C--CCCCCCceeEEEE
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD--K--YDIGTGFGHFGIA   76 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~--~~~~~~~~~i~~~   76 (262)
                      |+||.+.|+|++++.+|| +.|||+++.+...  .  ....+..+.    ..+.+.......  .  ...+.++.+++|.
T Consensus        13 l~hV~~~V~D~~~~~~fy-~~LGf~~~~~~~~--~--~~~l~~~g~----~~l~l~~~~~~~~~~~~~~~g~gv~~iaf~   83 (357)
T 1cjx_A           13 FEFIEFASPTPGTLEPIF-EIMGFTKVATHRS--K--NVHLYRQGE----INLILNNEPNSIASYFAAEHGPSVCGMAFR   83 (357)
T ss_dssp             EEEEEEECSSTTSSHHHH-HHTTCEEEEEESS--S--SEEEEEETT----EEEEEECCSSSHHHHHHHHHSSEEEEEEEE
T ss_pred             EEEEEEEeCCHHHHHHHH-HHCCCEEEEEeCC--e--eEEEEecCC----EEEEEECCCCchhhhhhhhcCCeEEEEEEE
Confidence            589999999999999999 7999999876431  1  233344332    234444321110  0  1245789999999


Q ss_pred             eCCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCCC------------------C-----CCcee
Q 024779           77 VDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT------------------P-----EPLCQ  133 (262)
Q Consensus        77 v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~~------------------~-----~~~~~  133 (262)
                      |+|+++++++++++|+++..++..  .|......+.+|+|..++|+++...                  +     .+++|
T Consensus        84 V~D~~~~~~~l~~~G~~~~~~~~~--~g~~~~~~~~~~gg~~~~~vd~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~idH  161 (357)
T 1cjx_A           84 VKDSQKAYNRALELGAQPIHIDTG--PMELNLPAIKGIGGAPLYLIDRFGEGSSIYDIDFVYLEGVERNPVGAGLKVIDH  161 (357)
T ss_dssp             ESCHHHHHHHHHHTTCCBCCCCCC--TTCBCCCEEECGGGCEEEEECCCSSSCCHHHHHEEECTTCCSSCCTTSEEEEEE
T ss_pred             eCCHHHHHHHHHHcCCEEeecCCC--CCcEEEEeeeCCCCeEEEEECCCCCCCCcCCCCcccCCccccCCCCCCeeEECc
Confidence            999999999999999988765522  1233445567788877777754311                  1     25889


Q ss_pred             EEeeec--ChhhhHHHHHHhcCCeeeeeccCcC--ccc--eeeeeccCCCCcceEEEEeee-cCCcc-------cccCCc
Q 024779          134 VMLRVG--DLDRSINFYEQAFGMELLRKRDNPE--YKY--TIAMMGYGPEDKNVVLELTYN-YGVTD-------YDKGNA  199 (262)
Q Consensus       134 v~l~v~--d~~~~~~FY~~~lG~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~l~~~-~~~~~-------~~~~~~  199 (262)
                      +++.|+  |++++.+||+++|||++......++  ...  ...++.    .+...++|.+. .....       ...+++
T Consensus       162 v~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~~----~g~~~i~L~~~~~~~~~~~~~~~~~~~g~g  237 (357)
T 1cjx_A          162 LTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAP----DGMIRIPLNEESSKGAGQIEEFLMQFNGEG  237 (357)
T ss_dssp             ECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECT----TSSCEEEEEEECTTCCSHHHHHHHHHTSSB
T ss_pred             eEEeechhhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEECC----CCCEEEEEeeecCCCCChHHHhHHhcCCCC
Confidence            999999  9999999999999999876543221  111  122222    23467777765 22111       124678


Q ss_pred             eeEEEEEecCHHHHHHHHHHhCCeeec-CCc--------cC-CCCc-------ceEEEEeC----CCCcEEEEEecc
Q 024779          200 YAQIAIGTDDVYKTAEAIKLFGGKVTR-EPG--------PL-PGIN-------TKITACLD----PDGWKTVFVDNV  255 (262)
Q Consensus       200 ~~~i~~~v~dl~~~~~~l~~~g~~~~~-~~~--------~~-~~~~-------~~~~~~~D----P~G~~ie~~~~~  255 (262)
                      ++||||.|+|+++++++|+++|++++. .|.        +. ..+.       ..++|-+|    |+|++++|+..+
T Consensus       238 ~~HiAf~v~Di~~~~~~L~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~~il~d~d~~~~~~g~llqift~~  314 (357)
T 1cjx_A          238 IQHVAFLTDDLVKTWDALKKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQARGILLDGSSVEGDKRLLLQIFSET  314 (357)
T ss_dssp             CCEEEEEESCHHHHHHHHHHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHHTCEEEEEEETTEEEEEEEEEBCC
T ss_pred             eeEEEEEcCCHHHHHHHHHHcCCcccCCCChHHHHHHHHHhccccccHHHHHHcCeEEecCCCCCCCCeEEEEeccC
Confidence            999999999999999999999999987 551        00 1111       12577788    888888888754

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.89  E-value=7.3e-22  Score=141.30  Aligned_cols=128  Identities=50%  Similarity=0.908  Sum_probs=98.9

Q ss_pred             CceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecC
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDD  209 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~d  209 (262)
                      ++.|+.|.|+|++++++||+++|||++......+++.+...++..+....+..+.|.......+...+.+..|++|.|+|
T Consensus         2 ~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~v~d   81 (135)
T 1f9z_A            2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDN   81 (135)
T ss_dssp             CEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECSC
T ss_pred             cceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEcCCCCcccCCCCccEEEEEeCC
Confidence            57899999999999999999999999987654344445556666543223567777764433333345688899999999


Q ss_pred             HHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecccc
Q 024779          210 VYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDF  257 (262)
Q Consensus       210 l~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~  257 (262)
                      +++++++|+++|+++..+|...++|..+++|++||+||.|||++..+.
T Consensus        82 ~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~~  129 (135)
T 1f9z_A           82 AAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDA  129 (135)
T ss_dssp             HHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC---
T ss_pred             HHHHHHHHHHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEecCCC
Confidence            999999999999999988877777655789999999999999997653

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.87  E-value=4.7e-22  Score=145.99  Aligned_cols=124  Identities=13%  Similarity=0.058  Sum_probs=89.6

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcc-----cccCCceeEE
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD-----YDKGNAYAQI  203 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~~~~~~~i  203 (262)
                      -+|.|++|.|+|+++|++||+++|||++.......+.  .+..+..........+.+........     ...+.+..|+
T Consensus        25 Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~l  102 (155)
T 4g6x_A           25 MRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGAD--RWLTVVSPEAPDGTQLLLEPSSHAAVTPFKEALVADGIPAA  102 (155)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTE--EEEEEECTTCTTSCEEEEEECCSTTHHHHHHHHHHTTCCSE
T ss_pred             eEEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCCCc--eEEEEeccCCCcceEEEeccCCCccccccccccccCCceEE
Confidence            3799999999999999999999999998765443332  33333322222222232222111111     1123578899


Q ss_pred             EEEecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          204 AIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       204 ~~~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                      +|.|+|+++++++|+++|+++..+|.+.++  ++++||+|||||+|||+|-++
T Consensus       103 ~f~VdDvda~~~~l~~~Gv~~~~~p~~~~~--g~~~~f~DPdGn~iel~q~~~  153 (155)
T 4g6x_A          103 SFAVDDIAAEYERLSALGVRFTQEPTDMGP--VVTAILDDTCGNLIQLMQIAY  153 (155)
T ss_dssp             EEEESCHHHHHHHHHHTTCCEEEEEEECSS--CEEEEEECSSSCEEEEEEC--
T ss_pred             EeeechhhhhhhHHhcCCcEEeeCCEEcCC--eEEEEEECCCCCEEEEEEECC
Confidence            999999999999999999999999988777  488999999999999999654

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.87  E-value=5.5e-21  Score=136.70  Aligned_cols=127  Identities=61%  Similarity=1.092  Sum_probs=95.7

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCH
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDV   80 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~   80 (262)
                      |+|+.|.|+|++++++||+++|||++......+.+.+..+++..+.......+++...........+.++.|++|.|+|+
T Consensus         3 l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~v~d~   82 (135)
T 1f9z_A            3 LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNA   82 (135)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECSCH
T ss_pred             ceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEcCCCCcccCCCCccEEEEEeCCH
Confidence            58999999999999999999999999876543344455667766543223355665433322333456888999999999


Q ss_pred             HHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCCC
Q 024779           81 AKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  127 (262)
Q Consensus        81 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~~  127 (262)
                      ++++++|+++|+++..+|....+|..+.++|.||+||.|||++..+.
T Consensus        83 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~~  129 (135)
T 1f9z_A           83 AEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDA  129 (135)
T ss_dssp             HHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC---
T ss_pred             HHHHHHHHHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEecCCC
Confidence            99999999999999877766665555778999999999999987654

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.85  E-value=2e-20  Score=147.35  Aligned_cols=142  Identities=18%  Similarity=0.277  Sum_probs=110.5

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeC--
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD--   78 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~--   78 (262)
                      |+||.|.|+|++++.+||+++|||++..+..      ..+++..++  .  .+.+.....     .+.++.|++|.|+  
T Consensus        27 l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~------~~~~L~~g~--~--~l~l~~~~~-----~~~~~~hiaf~V~~~   91 (252)
T 3pkv_A           27 IKQLTLYTAELDRMLAFYTNMLGAQHVHEQA------DAFTIQLGV--S--QIQFRAAAD-----GTKPFYHIAINIAAN   91 (252)
T ss_dssp             EEEEEEEESCHHHHHHHHHHHHCGGGEEECS------SEEEEEETT--E--EEEEEECCT-----TCCCCCEEEEEECTT
T ss_pred             EEEEEEEeCCHHHHHHHHHHhcCCEEEEccC------CEEEEEeCC--E--EEEEEECCC-----CCCCeeEEEEEecHH
Confidence            5799999999999999999999999877643      246666653  2  345544321     1346789999886  


Q ss_pred             CHHHHHHHHHHcCCeeecC-Ccc---cCCCCeEEEEEECCCCCEEEEEEcCCC------------CCCceeEEeeecChh
Q 024779           79 DVAKTVELIKAKGGKVTRE-PGP---VKGGNTVIAFIEDPDGYKFELLERGPT------------PEPLCQVMLRVGDLD  142 (262)
Q Consensus        79 d~~~~~~~l~~~G~~~~~~-~~~---~~~~~~~~~~~~DP~G~~iel~~~~~~------------~~~~~~v~l~v~d~~  142 (262)
                      ++++++++|+++ +++..+ +..   ...++.+.++|.|||||.+||++....            +.+++||.|.|+|++
T Consensus        92 dld~~~~rL~~~-v~~~~~~~~~~~~~~~~g~~~~~f~DPdGn~iEl~~~~~~~~~~~~~~~~~~i~glghV~L~v~d~~  170 (252)
T 3pkv_A           92 HFQEGKAWLSGF-GELLTENDEDQAYFPFFNAYSCYVEDPSGNIIELISRQQAAPVLDKPFSADQLLSIGEINITTSDVE  170 (252)
T ss_dssp             CHHHHHHHHTTS-SCCCCBTTBSCEEETTTTEEEEEEECTTCCEEEEEEESSSSCCCCSCCCGGGCCEEEEEEEECSCHH
T ss_pred             HHHHHHHHHHhc-ceEeccCCccccccccCCeEEEEEECCCCCEEEEEEeCCCCccccCCCCHHHCcEeeeEEEEeCCHH
Confidence            599999999999 988652 221   123478899999999999999986532            237999999999999


Q ss_pred             hhHHHHHHhcCCeeeee
Q 024779          143 RSINFYEQAFGMELLRK  159 (262)
Q Consensus       143 ~~~~FY~~~lG~~~~~~  159 (262)
                      ++.+|| ++|||+....
T Consensus       171 ~~~~fl-~~LG~~~~~~  186 (252)
T 3pkv_A          171 QAATRL-KQAELPVKLD  186 (252)
T ss_dssp             HHHHHH-HHTTCCCCGG
T ss_pred             HHHHHH-HHcCCCcccC
Confidence            999999 9999998764

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.84  E-value=3.5e-20  Score=140.19  Aligned_cols=129  Identities=29%  Similarity=0.510  Sum_probs=100.6

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCc---------------ceEEEEeeecCCc-
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDK---------------NVVLELTYNYGVT-  192 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~l~~~~~~~-  192 (262)
                      .+++|+.|.|+|++++++||+++|||++......+...+...++.......               ...++|....... 
T Consensus        33 ~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  112 (187)
T 3vw9_A           33 FLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTED  112 (187)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEETTGGG
T ss_pred             eEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEecCCCC
Confidence            479999999999999999999999999988765555566777776543211               3567776543321 


Q ss_pred             ----ccc----cCCceeEEEEEecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecccccc
Q 024779          193 ----DYD----KGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDFLK  259 (262)
Q Consensus       193 ----~~~----~~~~~~~i~~~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~~~  259 (262)
                          +..    ...+..|++|.|+|+++++++|+++|+++..+|...++  ++++|++||+||.|||++.+....
T Consensus       113 ~~~~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l~~~G~~~~~~~~~~~~--~~~~~~~DPdG~~iel~~~~~~~~  185 (187)
T 3vw9_A          113 DETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNKMAT  185 (187)
T ss_dssp             CTTCCCCCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSS--TTCEEEECTTCCEEEEECGGGSGG
T ss_pred             CCccccccCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEeeCCccCCc--ceEEEEECCCCCEEEEEEcccccc
Confidence                111    12488999999999999999999999999998866555  357899999999999999887543

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.84  E-value=3.2e-20  Score=136.15  Aligned_cols=121  Identities=21%  Similarity=0.185  Sum_probs=85.5

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCC-----CCCCCCceeEEE
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDK-----YDIGTGFGHFGI   75 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~~i~~   75 (262)
                      |+|++|.|+|+++|++||+++|||++..+....+  .....+..........+..........     ...+.+..|++|
T Consensus        27 i~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~l~f  104 (155)
T 4g6x_A           27 IHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGA--DRWLTVVSPEAPDGTQLLLEPSSHAAVTPFKEALVADGIPAASF  104 (155)
T ss_dssp             CCEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT--EEEEEEECTTCTTSCEEEEEECCSTTHHHHHHHHHHTTCCSEEE
T ss_pred             EEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCCC--ceEEEEeccCCCcceEEEeccCCCccccccccccccCCceEEEe
Confidence            6899999999999999999999999877644322  122222222222222222222211111     112457789999


Q ss_pred             EeCCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcC
Q 024779           76 AVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        76 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                      .|+|+++++++|+++|+++..+|...++  ++.++|.|||||.|||+|..
T Consensus       105 ~VdDvda~~~~l~~~Gv~~~~~p~~~~~--g~~~~f~DPdGn~iel~q~~  152 (155)
T 4g6x_A          105 AVDDIAAEYERLSALGVRFTQEPTDMGP--VVTAILDDTCGNLIQLMQIA  152 (155)
T ss_dssp             EESCHHHHHHHHHHTTCCEEEEEEECSS--CEEEEEECSSSCEEEEEEC-
T ss_pred             eechhhhhhhHHhcCCcEEeeCCEEcCC--eEEEEEECCCCCEEEEEEEC
Confidence            9999999999999999999888877664  47789999999999999864

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.84  E-value=5.1e-20  Score=133.34  Aligned_cols=123  Identities=43%  Similarity=0.756  Sum_probs=93.8

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEec
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTD  208 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~  208 (262)
                      .++.|+.|.|+|++++++||+++|||++......+++.+...++..+....+..+.|.........+.+.+..|++|.|+
T Consensus         7 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~   86 (144)
T 2c21_A            7 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGVE   86 (144)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEEES
T ss_pred             ceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecCCCCCCCCCCCceEEEEEeC
Confidence            57899999999999999999999999998764433334445566654322346777776543323334568899999999


Q ss_pred             CHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          209 DVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       209 dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                      |+++++++|+++|+++..+     ++...++|++||+||.|||++..+
T Consensus        87 d~~~~~~~l~~~G~~~~~~-----~g~~~~~~~~DPdG~~iel~~~~~  129 (144)
T 2c21_A           87 DVKELVADMRKHDVPIDYE-----DESGFMAFVVDPDGYYIELLNEKT  129 (144)
T ss_dssp             CHHHHHHHHHHTTCCEEEE-----CSSSSEEEEECTTSCEEEEEEHHH
T ss_pred             CHHHHHHHHHHCCCEEecc-----CCcEEEEEEECCCCCEEEEEEcCc
Confidence            9999999999999998865     333345599999999999998654

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.84  E-value=4.9e-20  Score=131.31  Aligned_cols=123  Identities=19%  Similarity=0.229  Sum_probs=94.1

Q ss_pred             CCCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEe
Q 024779          128 PEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGT  207 (262)
Q Consensus       128 ~~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v  207 (262)
                      ..++.|+.|.|+|++++++||+++|||++.......++ ..+..+...  .....+.+.............+..|++|.|
T Consensus        11 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~--~~~~~l~l~~~~~~~~~~~~~~~~~~~~~v   87 (133)
T 4hc5_A           11 IAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDPN-MRFVTVVPP--GAQTQVALGLPSWYEDGRKPGGYTGISLIT   87 (133)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEETT-EEEEEEECT--TCSCEEEEECGGGCSSCCCSCEEEEEEEEE
T ss_pred             ccceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCCC-ceEEEEECC--CCceEEEEecCcccccccCCCCeEEEEEEe
Confidence            45899999999999999999999999999876432221 233334322  234566666533211222345789999999


Q ss_pred             cCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEec
Q 024779          208 DDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDN  254 (262)
Q Consensus       208 ~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  254 (262)
                      +|+++++++|+++|+++..+|...++|. +.+|++||+||.|||+|.
T Consensus        88 ~d~~~~~~~l~~~G~~~~~~~~~~~~g~-~~~~~~DP~G~~~el~ee  133 (133)
T 4hc5_A           88 RDIDEAYKTLTERGVTFTKPPEMMPWGQ-RATWFSDPDGNQFFLVEE  133 (133)
T ss_dssp             SCHHHHHHHHHHTTCEESSSCEECTTSC-EEEEEECTTCEEEEEEEC
T ss_pred             CCHHHHHHHHHHCCCEeecCCCcCCCCC-EEEEEECCCCCEEEEEeC
Confidence            9999999999999999998888888764 899999999999999974

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.83  E-value=7.4e-20  Score=129.37  Aligned_cols=119  Identities=22%  Similarity=0.268  Sum_probs=93.5

Q ss_pred             CceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcc--cccCCceeEEEEEe
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD--YDKGNAYAQIAIGT  207 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~i~~~v  207 (262)
                      +++|+.|.|+|++++++||+++|||++......++..+...++...+   +..+.|.......+  ...+.+..|++|.|
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~g~~hi~~~v   79 (127)
T 3e5d_A            3 KIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFED---GARLEIMSRTDVTGKTTGENLGWAHIAIST   79 (127)
T ss_dssp             CCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSS---SCEEEEEEETTCCCCCCSSCSSCCCEEEEC
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCC---CcEEEEEecCCCCCCCCcCCCceEEEEEEc
Confidence            58899999999999999999999999976644334445555665432   46777776543322  22456789999999


Q ss_pred             cC---HHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEE
Q 024779          208 DD---VYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFV  252 (262)
Q Consensus       208 ~d---l~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~  252 (262)
                      +|   +++++++|+++|+++..+|...+++ .+.+|++||+||.|||+
T Consensus        80 ~d~~~v~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~  126 (127)
T 3e5d_A           80 GTKEAVDELTEKLRQDGFAIAGEPRMTGDG-YYESVVLDPEGNRIEIT  126 (127)
T ss_dssp             SSHHHHHHHHHHHHHTTCCEEEEEEECTTS-CEEEEEECTTSCEEEEE
T ss_pred             CCHHHHHHHHHHHHHcCCeEecCcccCCCC-cEEEEEECCCCCEEEEe
Confidence            99   8899999999999999888766664 37899999999999996

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.83  E-value=1.3e-19  Score=128.08  Aligned_cols=118  Identities=19%  Similarity=0.332  Sum_probs=90.3

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCC--CCCCCCCCceeEEEEeC
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGV--DKYDIGTGFGHFGIAVD   78 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~i~~~v~   78 (262)
                      |+||+|.|+|++++++||+++|||++..+...+...+..+++..++ .  ..+.+......  .+...+.|+.|++|.|+
T Consensus         4 i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~-~--~~l~l~~~~~~~~~~~~~~~g~~hi~~~v~   80 (127)
T 3e5d_A            4 IEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFED-G--ARLEIMSRTDVTGKTTGENLGWAHIAISTG   80 (127)
T ss_dssp             CCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSS-S--CEEEEEEETTCCCCCCSSCSSCCCEEEECS
T ss_pred             EEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCC-C--cEEEEEecCCCCCCCCcCCCceEEEEEEcC
Confidence            6899999999999999999999999876643333344566776643 2  34566544322  22224567899999999


Q ss_pred             C---HHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEE
Q 024779           79 D---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  122 (262)
Q Consensus        79 d---~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~  122 (262)
                      |   +++++++|+++|+++..+|....+ +.+.++|.||+||.|||+
T Consensus        81 d~~~v~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~  126 (127)
T 3e5d_A           81 TKEAVDELTEKLRQDGFAIAGEPRMTGD-GYYESVVLDPEGNRIEIT  126 (127)
T ss_dssp             SHHHHHHHHHHHHHTTCCEEEEEEECTT-SCEEEEEECTTSCEEEEE
T ss_pred             CHHHHHHHHHHHHHcCCeEecCcccCCC-CcEEEEEECCCCCEEEEe
Confidence            9   889999999999999877665554 467789999999999986

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.83  E-value=1.3e-19  Score=129.09  Aligned_cols=120  Identities=21%  Similarity=0.307  Sum_probs=91.3

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEee-------ecCCcc---cc-cC
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTY-------NYGVTD---YD-KG  197 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~---~~-~~  197 (262)
                      .+++|+.|.|+|++++++||+++|||++......++......++..+    ...++|..       ......   .+ .+
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~~   79 (134)
T 3l7t_A            4 KAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCG----DIELEIFGNKLTDSNYCAPPERISWPREA   79 (134)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEET----TEEEEEEECCTTSTTCCCCCCCCCSSSCC
T ss_pred             eeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecC----CeEEEEEecccccccccCCccccCCCCCC
Confidence            46899999999999999999999999998765433333334455533    34666666       211111   11 45


Q ss_pred             CceeEEEEEecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEe
Q 024779          198 NAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVD  253 (262)
Q Consensus       198 ~~~~~i~~~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~  253 (262)
                      .+..|++|.|+|+++++++|+++|+++...|...+++ .+.+|++||+||.|||+|
T Consensus        80 ~g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           80 CGLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYTG-KKMAFFFDPDGLPLELHE  134 (134)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHTCCCCCCEECTTSC-CEEEEEECTTCCEEEEEC
T ss_pred             CCeEEEEEEECCHHHHHHHHHhCCCcccceeccCCCc-eEEEEEECCCCCEEEEeC
Confidence            6889999999999999999999999998776655554 488999999999999986

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.83  E-value=8e-20  Score=130.19  Aligned_cols=121  Identities=19%  Similarity=0.255  Sum_probs=90.8

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCccc-------ccCCcee
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDY-------DKGNAYA  201 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-------~~~~~~~  201 (262)
                      .+++|+.|.|+|++++++||+++|||++......++......++..+    ...+++.........       ....+..
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~g~~   79 (134)
T 3rmu_A            4 GRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLG----NTKMELLHPLGLDSPIAGFLQKNKAGGMH   79 (134)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECS----SSEEEEEEECSTTCTTHHHHHHCTTCEEE
T ss_pred             ceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecC----CEEEEEEecCCCCchhhhhhhccCCCCce
Confidence            46899999999999999999999999987654444444555666643    245666554332211       2356889


Q ss_pred             EEEEEecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEE--eCCCCcEEEEEe
Q 024779          202 QIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITAC--LDPDGWKTVFVD  253 (262)
Q Consensus       202 ~i~~~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~--~DP~G~~ie~~~  253 (262)
                      |++|.|+|+++++++|+++|+++..++.....+..+++++  +||+||.|||+|
T Consensus        80 hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~e  133 (134)
T 3rmu_A           80 HICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQ  133 (134)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCTTBCCCCEECTTSSEEEEECSCSSCCSCEEEEE
T ss_pred             EEEEEcCCHHHHHHHHHHcCCcccCCCcccCCCCceEEEEecCCCCcEEEEEEc
Confidence            9999999999999999999999887754444332356666  899999999997

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.82  E-value=2e-19  Score=128.12  Aligned_cols=118  Identities=26%  Similarity=0.366  Sum_probs=88.6

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeee-------cCCCC---CCC-CCCC
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTY-------NYGVD---KYD-IGTG   69 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------~~~~~---~~~-~~~~   69 (262)
                      |+||+|.|+|++++++||+++|||++..+...+......+++..++.    .+++..       .....   ... .+.+
T Consensus         6 i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~----~l~l~~~~~~~~~~~~~~~~~~~~~~~~g   81 (134)
T 3l7t_A            6 VHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDI----ELEIFGNKLTDSNYCAPPERISWPREACG   81 (134)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEETTE----EEEEEECCTTSTTCCCCCCCCCSSSCCSE
T ss_pred             EeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecCCe----EEEEEecccccccccCCccccCCCCCCCC
Confidence            58999999999999999999999999877544443333555665532    445544       11111   112 4557


Q ss_pred             ceeEEEEeCCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEE
Q 024779           70 FGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  123 (262)
Q Consensus        70 ~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~  123 (262)
                      +.|++|.|+|+++++++|+++|+++..++....+ +.+.++|.||+||.|||+|
T Consensus        82 ~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           82 LRHLAFYVEDVEASRQELIALGIRVEEVRYDDYT-GKKMAFFFDPDGLPLELHE  134 (134)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHTCCCCCCEECTTS-CCEEEEEECTTCCEEEEEC
T ss_pred             eEEEEEEECCHHHHHHHHHhCCCcccceeccCCC-ceEEEEEECCCCCEEEEeC
Confidence            8899999999999999999999998766554443 5688999999999999985

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=99.82  E-value=2.8e-18  Score=130.57  Aligned_cols=203  Identities=14%  Similarity=0.096  Sum_probs=134.0

Q ss_pred             eEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeE---EEEeCC
Q 024779            3 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHF---GIAVDD   79 (262)
Q Consensus         3 hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i---~~~v~d   79 (262)
                      +..|.|+|++++.+||+++|||++..+++      ..+.++.+.....+.++-.+  .... ..-.|+.|+   ++.|++
T Consensus        13 ~p~LrV~nr~~~~~FY~~vlG~kll~ee~------~~a~lg~~~~~~~L~lEEsp--~~~~-~~~~Glkh~a~i~i~vp~   83 (244)
T 3e0r_A           13 IPTLKANNRKLNETFYIETLGMKALLEES------AFLSLGDQTGLEKLVLEEAP--SMRT-RKVEGRKKLARLIVKVEN   83 (244)
T ss_dssp             EEEEEESSHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCEEEEEEECC--TTTC-BCCCSSCSEEEEEEEESS
T ss_pred             eeEEEECCHHHHHHHHHhccCcEEeeccC------cEEEeecCCCcceEEEEeCC--Cccc-ccccccceeeeEEEEcCC
Confidence            57899999999999999999999998875      46677654443333333322  1111 234577777   599999


Q ss_pred             HHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCCC----------------------CCCceeEEee
Q 024779           80 VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT----------------------PEPLCQVMLR  137 (262)
Q Consensus        80 ~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~~----------------------~~~~~~v~l~  137 (262)
                      .+++.+-|.. +..+.. .....  .++++|+.||+||.|+++...+.                      ...+ ||.|+
T Consensus        84 ~~el~~lL~~-~~~~~~-~~~gd--hgyA~yl~dPEGn~ieiyae~d~~~l~~v~~~~~l~~~~~~~gLs~fti-~I~Ln  158 (244)
T 3e0r_A           84 PLEIEGILSK-TDSIHR-LYKGQ--NGYAFEIFSPEDDLILIHAEDDIASLVEVGEKPEFQTDLASISLSKFEI-SMELH  158 (244)
T ss_dssp             HHHHHHHHTT-CSCCSE-EEECS--SSEEEEEECTTCCEEEEECCSCGGGCEECSSCCCCCCCCSCCCCSSEEE-EEEEE
T ss_pred             HHHHHHHHhc-cccccc-ccccC--CcEEEEEECCCCCeEEEEEcCCHHHhhcccchhhccccccccCCCCcEE-EEEEE
Confidence            7776665555 544321 12233  44579999999999999954321                      1157 99999


Q ss_pred             ecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCc-ccccCCceeEEEEEec--CHHHHH
Q 024779          138 VGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVT-DYDKGNAYAQIAIGTD--DVYKTA  214 (262)
Q Consensus       138 v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~i~~~v~--dl~~~~  214 (262)
                      |+|..++  ||.+ +|+.           ....|....+.            +.. +....-++-.+.|.|+  |+.++.
T Consensus       159 V~d~~~s--Fy~~-~~~~-----------~~~~F~~a~G~------------dl~~~~~~t~gLe~l~~~v~~~dl~~l~  212 (244)
T 3e0r_A          159 LPTDIES--FLES-SEIG-----------ASLDFIPAQGQ------------DLTVDNTVTWDLSMLKFLVNELDIASLR  212 (244)
T ss_dssp             ECTTCCC--SCCH-HHHT-----------TTEEEEECCCT------------TTTCCTTSBSSEEEEEEEESSCCHHHHH
T ss_pred             cCchHHH--Hhhc-cCCc-----------ccEEEEcccCC------------CCCCCCCCccCceEEEEEeCHHHHHHHH
Confidence            9999998  9986 4441           12223321110            110 1222346667777765  788999


Q ss_pred             HHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEe
Q 024779          215 EAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVD  253 (262)
Q Consensus       215 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~  253 (262)
                      ++|++.|..+.+.        .+++.+.||+|+.|+|.+
T Consensus       213 ~~L~~~g~~idkk--------~~~l~~~DpsgIeiwF~~  243 (244)
T 3e0r_A          213 QKFESTEYFIPKS--------EKFFLGKDRNNVELWFEE  243 (244)
T ss_dssp             HHTTTSCEECCTT--------CCEEEEECTTSCEEEEEE
T ss_pred             HHHHhCCceEccc--------CCEEEEECCCCCEEEEEE
Confidence            9999987744322        368899999999999975

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.82  E-value=2.2e-19  Score=127.92  Aligned_cols=120  Identities=26%  Similarity=0.389  Sum_probs=88.2

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCC-------CCCCCceeE
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKY-------DIGTGFGHF   73 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-------~~~~~~~~i   73 (262)
                      |+||+|.|+|++++.+||+++|||++..+...+......+++..++.    .+++.........       ..+.++.|+
T Consensus         6 i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~g~~hi   81 (134)
T 3rmu_A            6 LNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNT----KMELLHPLGLDSPIAGFLQKNKAGGMHHI   81 (134)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECSSS----EEEEEEECSTTCTTHHHHHHCTTCEEEEE
T ss_pred             eeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecCCE----EEEEEecCCCCchhhhhhhccCCCCceEE
Confidence            58999999999999999999999998865443333455667766542    3444443221111       235688999


Q ss_pred             EEEeCCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEE--ECCCCCEEEEEEc
Q 024779           74 GIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFI--EDPDGYKFELLER  124 (262)
Q Consensus        74 ~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~--~DP~G~~iel~~~  124 (262)
                      +|.|+|+++++++|+++|+++..++.....++.+.+++  .||+||.|||++.
T Consensus        82 ~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~e~  134 (134)
T 3rmu_A           82 CIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQA  134 (134)
T ss_dssp             EEEESCHHHHHHHHHHTTCTTBCCCCEECTTSSEEEEECSCSSCCSCEEEEEC
T ss_pred             EEEcCCHHHHHHHHHHcCCcccCCCcccCCCCceEEEEecCCCCcEEEEEEcC
Confidence            99999999999999999999876644433335556666  7999999999873

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.82  E-value=4.9e-19  Score=128.15  Aligned_cols=120  Identities=54%  Similarity=0.911  Sum_probs=89.4

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCH
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDV   80 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~   80 (262)
                      |+||.|.|+|++++.+||+++|||++..+...+.+.+..+++..++......+.+...........+.++.|++|.|+|+
T Consensus         9 i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d~   88 (144)
T 2c21_A            9 MLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGVEDV   88 (144)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEEESCH
T ss_pred             eEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecCCCCCCCCCCCceEEEEEeCCH
Confidence            57999999999999999999999999876533333445567766543112355666543322333456888999999999


Q ss_pred             HHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcC
Q 024779           81 AKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        81 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                      ++++++|+++|+++..+     +|....++|.||+||.|||++..
T Consensus        89 ~~~~~~l~~~G~~~~~~-----~g~~~~~~~~DPdG~~iel~~~~  128 (144)
T 2c21_A           89 KELVADMRKHDVPIDYE-----DESGFMAFVVDPDGYYIELLNEK  128 (144)
T ss_dssp             HHHHHHHHHTTCCEEEE-----CSSSSEEEEECTTSCEEEEEEHH
T ss_pred             HHHHHHHHHCCCEEecc-----CCcEEEEEEECCCCCEEEEEEcC
Confidence            99999999999998754     33344458999999999999753

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.81  E-value=7.1e-19  Score=125.24  Aligned_cols=119  Identities=16%  Similarity=0.265  Sum_probs=88.3

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCH
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDV   80 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~   80 (262)
                      |+||.|.|+|++++++||+++|||++..+...+. ......+..+.  ....+.+.............+..|++|.|+|+
T Consensus        14 i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~--~~~~l~l~~~~~~~~~~~~~~~~~~~~~v~d~   90 (133)
T 4hc5_A           14 VHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDP-NMRFVTVVPPG--AQTQVALGLPSWYEDGRKPGGYTGISLITRDI   90 (133)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEET-TEEEEEEECTT--CSCEEEEECGGGCSSCCCSCEEEEEEEEESCH
T ss_pred             eeEEEEEECCHHHHHHHHHhCcCCcEeeecccCC-CceEEEEECCC--CceEEEEecCcccccccCCCCeEEEEEEeCCH
Confidence            5799999999999999999999999987653222 12223333322  23345555433211222335678999999999


Q ss_pred             HHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEE
Q 024779           81 AKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  123 (262)
Q Consensus        81 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~  123 (262)
                      ++++++|+++|+++..+|...++ +.+.++|.||+|+.|+|++
T Consensus        91 ~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DP~G~~~el~e  132 (133)
T 4hc5_A           91 DEAYKTLTERGVTFTKPPEMMPW-GQRATWFSDPDGNQFFLVE  132 (133)
T ss_dssp             HHHHHHHHHTTCEESSSCEECTT-SCEEEEEECTTCEEEEEEE
T ss_pred             HHHHHHHHHCCCEeecCCCcCCC-CCEEEEEECCCCCEEEEEe
Confidence            99999999999999888777775 4488999999999999987

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.81  E-value=1.2e-19  Score=129.48  Aligned_cols=120  Identities=14%  Similarity=0.132  Sum_probs=90.0

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeec-cCcCccceeeeeccCCCCcceEEEEeeecCCccc-----ccCCceeE
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKR-DNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDY-----DKGNAYAQ  202 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~~  202 (262)
                      .+++|+.|.|+|++++++||+ +|||++.... ..+.......++..    +...++|.+.......     ..+.++.|
T Consensus         6 ~~i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~----~~~~l~l~~~~~~~~~~~~~~~~~~g~~h   80 (133)
T 3hdp_A            6 LKVHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVIN----GGYRVELVAPDGEDSPINKTIKKGSTPYH   80 (133)
T ss_dssp             CCEEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEE----TTEEEEEEEESSTTCTHHHHTTTSCEEEE
T ss_pred             eeeCEEEEEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeC----CCEEEEEEecCCCCChHHHHHhcCCceEE
Confidence            579999999999999999999 9999986542 11222344555553    2456777764332211     11678889


Q ss_pred             EEEEecCHHHHHHHHHHhCCeeecCCccC--CCCcceEEEEeCCCCcEEEEEec
Q 024779          203 IAIGTDDVYKTAEAIKLFGGKVTREPGPL--PGINTKITACLDPDGWKTVFVDN  254 (262)
Q Consensus       203 i~~~v~dl~~~~~~l~~~g~~~~~~~~~~--~~~~~~~~~~~DP~G~~ie~~~~  254 (262)
                      ++|.|+|+++++++|+++|+++..+|...  .+| .+++|++|||||.|||+|+
T Consensus        81 iaf~v~di~~~~~~l~~~G~~~~~~p~~~~~~~g-~~~~~~~dPdG~~iEl~e~  133 (133)
T 3hdp_A           81 ICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDN-RKVAFLFSTDIGLIELLEK  133 (133)
T ss_dssp             EEEEESCHHHHHHHHTTTTEEEEEEEEEEGGGTT-EEEEEEEETTTEEEEEEEC
T ss_pred             EEEEcCCHHHHHHHHHHcCCccccCCeecccCCC-ceEEEEECCCceEEEEecC
Confidence            99999999999999999999998765332  233 4789999999999999985

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.81  E-value=1.6e-19  Score=133.26  Aligned_cols=125  Identities=19%  Similarity=0.288  Sum_probs=95.9

Q ss_pred             CCCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcc------cccCCcee
Q 024779          128 PEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD------YDKGNAYA  201 (262)
Q Consensus       128 ~~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~------~~~~~~~~  201 (262)
                      ..+++||.|.|+|++++++||+++|||++......++......++..+    ...++|........      ...+.++.
T Consensus         6 ~~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g----~~~l~l~~~~~~~~~~~~~~~~~~~g~~   81 (161)
T 3oa4_A            6 SNKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIG----ESKIELLEPLSEESPIAKFIQKRGEGIH   81 (161)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEET----TEEEEEEEESSTTSHHHHHHHHHCSEEE
T ss_pred             cCcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCC----CeEEEEEeECCCCChHHHHhhcCCCCeE
Confidence            457999999999999999999999999998765444444556666643    35677776543321      12357899


Q ss_pred             EEEEEecCHHHHHHHHHHhCCeeecC-CccCCCCcceEEEE--eCCCCcEEEEEecccc
Q 024779          202 QIAIGTDDVYKTAEAIKLFGGKVTRE-PGPLPGINTKITAC--LDPDGWKTVFVDNVDF  257 (262)
Q Consensus       202 ~i~~~v~dl~~~~~~l~~~g~~~~~~-~~~~~~~~~~~~~~--~DP~G~~ie~~~~~~~  257 (262)
                      |++|.|+|+++++++|+++|+++..+ |....+| .+++|+  +||+||.|||++..+.
T Consensus        82 Hiaf~V~Did~~~~~l~~~G~~~~~~~~~~~~~g-~~~~f~~~~DPdG~~iEl~~~~~~  139 (161)
T 3oa4_A           82 HIAIGVKSIEERIQEVKENGVQMINDEPVPGARG-AQVAFLHPRSARGVLYEFCEKKEQ  139 (161)
T ss_dssp             EEEEECSCHHHHHHHHHHTTCCBSCSSCEECGGG-CEEEEBCGGGTTTCCEEEEECCCC
T ss_pred             EEEEEECCHHHHHHHHHHCCCEecccCcccCCCC-cEEEEEeccCCCeEEEEEEecCCc
Confidence            99999999999999999999999876 4433333 367777  4999999999998764

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.81  E-value=4.1e-19  Score=127.25  Aligned_cols=119  Identities=18%  Similarity=0.180  Sum_probs=90.9

Q ss_pred             CceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcc---cccCCceeEEEEE
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD---YDKGNAYAQIAIG  206 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~i~~~  206 (262)
                      ++.|+.|.|+|++++++||+++|||++.......+..+...++.     +...+.|........   ....++..|++|.
T Consensus         5 ~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-----~~~~l~l~~~~~~~~~~~~~~~~g~~h~~f~   79 (136)
T 2rk0_A            5 GVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-----GGLSIVLREHDGGGTDLFDETRPGLDHLSFS   79 (136)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-----TSCEEEEEEETTCSSSCCCTTSSEEEEEEEE
T ss_pred             cccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-----CCCEEEEEeCCCCcccCCCCCCCCcceEEEE
Confidence            58899999999999999999999999987654333334444444     235677776533211   1234688999999


Q ss_pred             e---cCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          207 T---DDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       207 v---~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                      |   +|+++++++|+++|+++. ++.+.++  ++.+|++|||||.|||++..+
T Consensus        80 v~~~~d~~~~~~~l~~~G~~~~-~~~~~~~--g~~~~~~DPdG~~iel~~~~~  129 (136)
T 2rk0_A           80 VESMTDLDVLEERLAKAGAAFT-PTQELPF--GWILAFRDADNIALEAMLGRE  129 (136)
T ss_dssp             ESSHHHHHHHHHHHHHHTCCBC-CCEEETT--EEEEEEECTTCCEEEEEEECT
T ss_pred             eCCHHHHHHHHHHHHHCCCccc-CccccCC--ceEEEEECCCCCEEEEEEcCC
Confidence            9   899999999999999987 4444455  388999999999999999765

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.81  E-value=4.6e-19  Score=124.95  Aligned_cols=120  Identities=18%  Similarity=0.245  Sum_probs=87.4

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCc--c-cccCCceeEEEE
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVT--D-YDKGNAYAQIAI  205 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~-~~~~~~~~~i~~  205 (262)
                      .++.|+.|.|+|++++++||+++|||++......++......++..++    ..+.|.......  + .+.+++..|++|
T Consensus         4 ~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~l~l~~~~~~~~~~~~~~~~g~~~~~~   79 (126)
T 2p25_A            4 KEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGS----QELEIFISDQFPARPSYPEALGLRHLAF   79 (126)
T ss_dssp             SCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEEEEEETT----EEEEEEECTTCCCCCCSSCCSSCCCEEE
T ss_pred             cccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEEEEecCC----eEEEEEeccCCCCCCCCCCCccceEEEE
Confidence            478999999999999999999999999876532222111112233321    266676532211  1 123457889999


Q ss_pred             EecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEe
Q 024779          206 GTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVD  253 (262)
Q Consensus       206 ~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~  253 (262)
                      .|+|+++++++|+++|+++...|...++| .+.+|++||+||.|||+|
T Consensus        80 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           80 KVEHIEEVIAFLNEQGIETEPLRVDDFTG-KKMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             ECSCHHHHHHHHHHTTCCCCCCEECTTTC-CEEEEEECTTCCEEEEEC
T ss_pred             EeCCHHHHHHHHHHcCCccccccccCCCC-cEEEEEECCCCCEEEeeC
Confidence            99999999999999999988666544454 478999999999999986

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.80  E-value=1.2e-18  Score=122.78  Aligned_cols=118  Identities=24%  Similarity=0.389  Sum_probs=85.3

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCC---CCCCCCCCCceeEEEEe
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG---VDKYDIGTGFGHFGIAV   77 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~i~~~v   77 (262)
                      |+||.|.|+|++++.+||+++|||++......+.......++..++.    .+.+.....   .+....+.+..|++|.|
T Consensus         6 i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~----~l~l~~~~~~~~~~~~~~~~g~~~~~~~v   81 (126)
T 2p25_A            6 IHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQ----ELEIFISDQFPARPSYPEALGLRHLAFKV   81 (126)
T ss_dssp             CCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEEEEEETTE----EEEEEECTTCCCCCCSSCCSSCCCEEEEC
T ss_pred             cceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEEEEecCCe----EEEEEeccCCCCCCCCCCCccceEEEEEe
Confidence            68999999999999999999999998865322222212344555542    345554221   11122345788999999


Q ss_pred             CCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEE
Q 024779           78 DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  123 (262)
Q Consensus        78 ~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~  123 (262)
                      +|+++++++|+++|+++..++....+ +.+.++|.||+||.|||++
T Consensus        82 ~d~~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           82 EHIEEVIAFLNEQGIETEPLRVDDFT-GKKMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             SCHHHHHHHHHHTTCCCCCCEECTTT-CCEEEEEECTTCCEEEEEC
T ss_pred             CCHHHHHHHHHHcCCccccccccCCC-CcEEEEEECCCCCEEEeeC
Confidence            99999999999999998765543443 5678899999999999974

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.80  E-value=6.3e-19  Score=129.01  Aligned_cols=124  Identities=17%  Similarity=0.173  Sum_probs=92.4

Q ss_pred             CCCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcC------ccceeeeeccCCCCcceEEEEeeecCCcc-----ccc
Q 024779          128 PEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPE------YKYTIAMMGYGPEDKNVVLELTYNYGVTD-----YDK  196 (262)
Q Consensus       128 ~~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~  196 (262)
                      ..+++||.|.|+|++++++||+++|||++......+.      ......++..+   .+..+.|.......+     ...
T Consensus        17 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~l~~~~~~~~~~~~~~~~   93 (156)
T 3kol_A           17 LRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITP---DGTILDLFGEPELSPPDPNPEKT   93 (156)
T ss_dssp             SCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECT---TSCEEEEEECTTCCCSSSSTTCC
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeC---CCCEEEEEecCCCCcCCCCCCCC
Confidence            3589999999999999999999999999876322211      01122344432   235566666433211     223


Q ss_pred             CCceeEEEEEec--CHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          197 GNAYAQIAIGTD--DVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       197 ~~~~~~i~~~v~--dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                      ..+..|++|.|+  |+++++++|+++|+++..+|...++  ++.+|++||+||.|||++.+.
T Consensus        94 ~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~DPdG~~iel~~~~~  153 (156)
T 3kol_A           94 FTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPT--GRGVYFYDPDGFMIEIRCDPE  153 (156)
T ss_dssp             CSSCCEEEEECCGGGHHHHHHHHHHTTCCEEEEEEEC-C--CEEEEEECTTSCEEEEEECCC
T ss_pred             CCceEEEEEEecHHHHHHHHHHHHHCCCccccCceecCC--ccEEEEECCCCCEEEEEecCC
Confidence            468899999998  9999999999999999888877766  468999999999999999865

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.80  E-value=1.1e-18  Score=126.59  Aligned_cols=128  Identities=16%  Similarity=0.203  Sum_probs=93.3

Q ss_pred             CCCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCC--CcceEEEEeeecCCccc------ccC--
Q 024779          128 PEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPE--DKNVVLELTYNYGVTDY------DKG--  197 (262)
Q Consensus       128 ~~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~------~~~--  197 (262)
                      ..+++|+.|.|+|++++++||+++|||++......++......++..++.  ..+..++|.+.......      ..+  
T Consensus         7 ~~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~   86 (148)
T 1jc4_A            7 FICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNGR   86 (148)
T ss_dssp             CSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTTC
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCCCCChHHHHHHhCCCC
Confidence            45799999999999999999999999999865433333344555654321  01256777764432211      233  


Q ss_pred             CceeEEEEEecCHHHHHHHHHHhCCeee-cCCccCCCCcceEEEE--eCCCCcEEEEEeccc
Q 024779          198 NAYAQIAIGTDDVYKTAEAIKLFGGKVT-REPGPLPGINTKITAC--LDPDGWKTVFVDNVD  256 (262)
Q Consensus       198 ~~~~~i~~~v~dl~~~~~~l~~~g~~~~-~~~~~~~~~~~~~~~~--~DP~G~~ie~~~~~~  256 (262)
                      .+..|++|.|+|+++++++|+++|+++. .+|....+| .+++++  +||+||.|||++.+.
T Consensus        87 ~g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~p~~~~~g-~~~~~~~~~DPdG~~iel~~~~~  147 (148)
T 1jc4_A           87 AGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGG-NRINFMHPKSGKGVLIELTQYPK  147 (148)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSS-CEEEEBCGGGGTTSCEEEEECCC
T ss_pred             CceEEEEEECCCHHHHHHHHHHCCCeecCcCcccCCCc-eEEEEEeecCCCcEEEEEEecCC
Confidence            6789999999999999999999999998 445443443 366777  999999999999764

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.80  E-value=1.1e-18  Score=131.51  Aligned_cols=128  Identities=28%  Similarity=0.527  Sum_probs=95.3

Q ss_pred             CCCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCC---------------CcceEEEEeeecCCc
Q 024779          128 PEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPE---------------DKNVVLELTYNYGVT  192 (262)
Q Consensus       128 ~~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~l~~~~~~~  192 (262)
                      ..++.|+.|.|+|++++++||+++|||++......++..+.+.++.....               ..+..++|.......
T Consensus        29 ~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~~~~~  108 (184)
T 2za0_A           29 DFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTE  108 (184)
T ss_dssp             TCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTGG
T ss_pred             ceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEecCCCC
Confidence            35789999999999999999999999999865443333445555553210               024567776543211


Q ss_pred             --c---c----ccCCceeEEEEEecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecccc
Q 024779          193 --D---Y----DKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDF  257 (262)
Q Consensus       193 --~---~----~~~~~~~~i~~~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~  257 (262)
                        +   .    ....+..|++|.|+|+++++++|+++|+++..+|...++  .+++|++||+||.|||++...+
T Consensus       109 ~~~~~~~~~~~~~~~g~~hi~f~v~dvd~~~~~l~~~G~~~~~~p~~~~~--~~~~~~~DPdG~~iel~~~~~~  180 (184)
T 2za0_A          109 DDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNKI  180 (184)
T ss_dssp             GCTTCCCCCSSSSSCCEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSS--TTCEEEECTTCCEEEEECTTTG
T ss_pred             CCcccccccCCCCCCCeeEEEEEeCCHHHHHHHHHHCCCeeecCCcCCCc--eeEEEEECCCCCEEEEEecCcc
Confidence              0   1    112578899999999999999999999999988766444  4678999999999999998764

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.80  E-value=2.8e-19  Score=127.52  Aligned_cols=119  Identities=24%  Similarity=0.271  Sum_probs=87.4

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEe-cCCCCcceeeEeeecCCCceeEEEeeecCCCCCC-----CCCCCceeEE
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKR-DIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKY-----DIGTGFGHFG   74 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~~~i~   74 (262)
                      |+||+|.|+|+++|++||+ +|||++..+. ..+......+++..++    ..+++..+......     ..+.|++|++
T Consensus         8 i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~~----~~l~l~~~~~~~~~~~~~~~~~~g~~hia   82 (133)
T 3hdp_A            8 VHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVINGG----YRVELVAPDGEDSPINKTIKKGSTPYHIC   82 (133)
T ss_dssp             EEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEETT----EEEEEEEESSTTCTHHHHTTTSCEEEEEE
T ss_pred             eCEEEEEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCCC----EEEEEEecCCCCChHHHHHhcCCceEEEE
Confidence            5899999999999999999 9999986542 1223344566666543    24566553322111     0157888999


Q ss_pred             EEeCCHHHHHHHHHHcCCeeecCCccc-CCCCeEEEEEECCCCCEEEEEEc
Q 024779           75 IAVDDVAKTVELIKAKGGKVTREPGPV-KGGNTVIAFIEDPDGYKFELLER  124 (262)
Q Consensus        75 ~~v~d~~~~~~~l~~~G~~~~~~~~~~-~~~~~~~~~~~DP~G~~iel~~~  124 (262)
                      |.|+|+++++++|+++|+++..+|.+. ..++.+.+|+.|||||.|||++.
T Consensus        83 f~v~di~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~dPdG~~iEl~e~  133 (133)
T 3hdp_A           83 YEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGLIELLEK  133 (133)
T ss_dssp             EEESCHHHHHHHHTTTTEEEEEEEEEEGGGTTEEEEEEEETTTEEEEEEEC
T ss_pred             EEcCCHHHHHHHHHHcCCccccCCeecccCCCceEEEEECCCceEEEEecC
Confidence            999999999999999999987654332 12356889999999999999873

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.80  E-value=6e-19  Score=130.17  Aligned_cols=122  Identities=25%  Similarity=0.439  Sum_probs=92.1

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCC------CCCCCceeEE
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKY------DIGTGFGHFG   74 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~------~~~~~~~~i~   74 (262)
                      |+||+|.|+|++++++||+++|||++..+...+......+++..++    ..+++.........      ..+.|+.|++
T Consensus         9 i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~----~~l~l~~~~~~~~~~~~~~~~~~~g~~Hia   84 (161)
T 3oa4_A            9 LDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGE----SKIELLEPLSEESPIAKFIQKRGEGIHHIA   84 (161)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEETT----EEEEEEEESSTTSHHHHHHHHHCSEEEEEE
T ss_pred             CCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCCC----eEEEEEeECCCCChHHHHhhcCCCCeEEEE
Confidence            5899999999999999999999999987654444455667776653    24566554322211      2356899999


Q ss_pred             EEeCCHHHHHHHHHHcCCeeecC-CcccCCCCeEEEEE--ECCCCCEEEEEEcCCC
Q 024779           75 IAVDDVAKTVELIKAKGGKVTRE-PGPVKGGNTVIAFI--EDPDGYKFELLERGPT  127 (262)
Q Consensus        75 ~~v~d~~~~~~~l~~~G~~~~~~-~~~~~~~~~~~~~~--~DP~G~~iel~~~~~~  127 (262)
                      |.|+|+++++++|+++|+++..+ +....+ +.+.+|+  .||+|+.|||++..+.
T Consensus        85 f~V~Did~~~~~l~~~G~~~~~~~~~~~~~-g~~~~f~~~~DPdG~~iEl~~~~~~  139 (161)
T 3oa4_A           85 IGVKSIEERIQEVKENGVQMINDEPVPGAR-GAQVAFLHPRSARGVLYEFCEKKEQ  139 (161)
T ss_dssp             EECSCHHHHHHHHHHTTCCBSCSSCEECGG-GCEEEEBCGGGTTTCCEEEEECCCC
T ss_pred             EEECCHHHHHHHHHHCCCEecccCcccCCC-CcEEEEEeccCCCeEEEEEEecCCc
Confidence            99999999999999999998766 444433 4566666  3999999999998654

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.79  E-value=1.9e-18  Score=126.02  Aligned_cols=124  Identities=16%  Similarity=0.187  Sum_probs=92.0

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccC-----------cCccceeeeeccCCCCcceEEEEeeecCCc-c---
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDN-----------PEYKYTIAMMGYGPEDKNVVLELTYNYGVT-D---  193 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~---  193 (262)
                      .++.|+.|.|+|++++++||++ |||++......           ++......++..+.  ++..++|....... .   
T Consensus        10 ~~i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--g~~~l~l~~~~~~~~~~~~   86 (153)
T 1ss4_A           10 LRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPD--GHSRIELSRFLTPPTIADH   86 (153)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTT--SSCEEEEEEEEESCCCCBC
T ss_pred             cceeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCC--CCcEEEEEEecCCCCcccc
Confidence            4789999999999999999999 99998754321           11223445555432  23566666532111 1   


Q ss_pred             ---cccCCceeEEEEEecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          194 ---YDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       194 ---~~~~~~~~~i~~~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                         ...+.+..|++|.|+|+++++++|+++|+++..+|.+.+++ .+++|++||+||.|||++...
T Consensus        87 ~~~~~~~~g~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~~  151 (153)
T 1ss4_A           87 RTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENS-YRLCYIRGVEGILIGLAEELG  151 (153)
T ss_dssp             TTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTT-EEEEEEECGGGCEEEEEEECC
T ss_pred             cCCCCCCCceEEEEEEeCCHHHHHHHHHHCCCeecCCCcccCCc-eEEEEEECCCCCEEEEEeccC
Confidence               12345778999999999999999999999999887666654 478999999999999998754

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.79  E-value=2.4e-18  Score=130.02  Aligned_cols=123  Identities=38%  Similarity=0.657  Sum_probs=92.2

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCc---------------eeEEEeeecCCC----
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDS---------------HFVIELTYNYGV----   61 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~l~~~~~~~~----   61 (262)
                      |+||+|.|+|++++++||+++|||++..+...+...+..+++..+....               ...+++......    
T Consensus        35 l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~  114 (187)
T 3vw9_A           35 LQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDE  114 (187)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEETTGGGCT
T ss_pred             EEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEecCCCCCC
Confidence            5799999999999999999999999988765555666777776544310               134555432211    


Q ss_pred             -CCCC----CCCCceeEEEEeCCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcC
Q 024779           62 -DKYD----IGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        62 -~~~~----~~~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                       ....    ...|+.|++|.|+|+++++++|+++|+++..++.....  .+.+||.||+||.|||++..
T Consensus       115 ~~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l~~~G~~~~~~~~~~~~--~~~~~~~DPdG~~iel~~~~  181 (187)
T 3vw9_A          115 TQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPN  181 (187)
T ss_dssp             TCCCCCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSS--TTCEEEECTTCCEEEEECGG
T ss_pred             ccccccCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEeeCCccCCc--ceEEEEECCCCCEEEEEEcc
Confidence             1111    22488899999999999999999999999887765443  34678999999999999864

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.79  E-value=5.9e-19  Score=129.89  Aligned_cols=120  Identities=19%  Similarity=0.218  Sum_probs=91.6

Q ss_pred             CCCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcC--------------ccceeeeeccCCCCcceEEEEeeecCCcc
Q 024779          128 PEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPE--------------YKYTIAMMGYGPEDKNVVLELTYNYGVTD  193 (262)
Q Consensus       128 ~~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  193 (262)
                      ..+++||.|.|+|++++++||+++|||++......++              ....+.++..+    ...++|.+......
T Consensus        17 ~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g----~~~leL~~~~~~~~   92 (159)
T 3gm5_A           17 MRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELG----PLQLELIEPDENPS   92 (159)
T ss_dssp             GGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEET----TEEEEEEEECSSSC
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecC----CEEEEEEEECCCCC
Confidence            3589999999999999999999999999875433221              23344555532    46677776533221


Q ss_pred             -c-----ccCCceeEEEEEecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCC--CcEEEEEec
Q 024779          194 -Y-----DKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPD--GWKTVFVDN  254 (262)
Q Consensus       194 -~-----~~~~~~~~i~~~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~--G~~ie~~~~  254 (262)
                       .     ..+.|+.|++|.|+|+++++++|+++|+++...+. ..+  .+++|+.|||  |+.|||+|+
T Consensus        93 ~~~~~l~~~~~g~~Hiaf~v~di~~~~~~l~~~G~~~~~~~~-~~g--~~~~~~~dpd~~G~~iEl~e~  158 (159)
T 3gm5_A           93 TWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGD-FEG--GRYAYIDTLRALKVMIELLEN  158 (159)
T ss_dssp             HHHHHHHHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEE-ETT--EEEEEESCHHHHSSEEEEEEE
T ss_pred             hhHHHhhcCCceEEEEEEEcCCHHHHHHHHHHCCCcEeeccc-cCC--eeEEEEeccccCcEEEEEEec
Confidence             1     13678999999999999999999999999986642 333  5899999999  999999986

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.79  E-value=1.3e-18  Score=123.93  Aligned_cols=119  Identities=18%  Similarity=0.204  Sum_probs=90.1

Q ss_pred             CCCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCc---ccccCCceeEEE
Q 024779          128 PEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVT---DYDKGNAYAQIA  204 (262)
Q Consensus       128 ~~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~i~  204 (262)
                      ..+++|+.|.|+|++++++||+++|||++.....      ...++..+    ...+.+.......   .....++..|++
T Consensus         8 ~~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~   77 (133)
T 3ey7_A            8 ISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGA------GRIALEFG----HQKINLHQLGNEFEPKAQNVRVGSADLC   77 (133)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT------TEEEEEET----TEEEEEEETTSCCSSCCTTCCTTCCEEE
T ss_pred             ecccCEEEEEECCHHHHHHHHHHccCceEEEecC------CeEEEEcC----CEEEEEEcCCCCccccCCCCCCCccEEE
Confidence            3578999999999999999999999999987531      12333332    2455555432211   122456889999


Q ss_pred             EEecC-HHHHHHHHHHhCCeeecCCccCCCC--cceEEEEeCCCCcEEEEEeccc
Q 024779          205 IGTDD-VYKTAEAIKLFGGKVTREPGPLPGI--NTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       205 ~~v~d-l~~~~~~l~~~g~~~~~~~~~~~~~--~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                      |.|+| +++++++|+++|+++..+|...+++  ..+.+|++||+||.|||++.++
T Consensus        78 ~~v~dd~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  132 (133)
T 3ey7_A           78 FITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYSN  132 (133)
T ss_dssp             EECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESCC
T ss_pred             EEeCcHHHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecCC
Confidence            99997 9999999999999999877655443  2378999999999999999764

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.79  E-value=5.1e-18  Score=123.76  Aligned_cols=122  Identities=20%  Similarity=0.233  Sum_probs=89.1

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecC-----------CCCcceeeEeeecCCCceeEEEeeec--CCCC-----
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDI-----------PEEKYTNAFLGYGPEDSHFVIELTYN--YGVD-----   62 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~-----   62 (262)
                      |+||.|.|+|++++++||++ |||++..+...           +......+++..++...  .+++...  ....     
T Consensus        12 i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~--~l~l~~~~~~~~~~~~~~   88 (153)
T 1ss4_A           12 MDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHS--RIELSRFLTPPTIADHRT   88 (153)
T ss_dssp             EEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSC--EEEEEEEEESCCCCBCTT
T ss_pred             eeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCc--EEEEEEecCCCCcccccC
Confidence            57999999999999999999 99999865432           11233456666644322  3444431  1111     


Q ss_pred             CCCCCCCceeEEEEeCCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCC
Q 024779           63 KYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  126 (262)
Q Consensus        63 ~~~~~~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~  126 (262)
                      ....+.|+.|++|.|+|+++++++|+++|+++..++....+ +.+.++|.||+|+.|||++...
T Consensus        89 ~~~~~~g~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~  151 (153)
T 1ss4_A           89 APVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYEN-SYRLCYIRGVEGILIGLAEELG  151 (153)
T ss_dssp             CCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETT-TEEEEEEECGGGCEEEEEEECC
T ss_pred             CCCCCCceEEEEEEeCCHHHHHHHHHHCCCeecCCCcccCC-ceEEEEEECCCCCEEEEEeccC
Confidence            11234578899999999999999999999999877755553 5688899999999999998643

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.78  E-value=4.1e-18  Score=121.27  Aligned_cols=116  Identities=22%  Similarity=0.365  Sum_probs=87.0

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCC---CCCCCCCCCceeEEEEe
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG---VDKYDIGTGFGHFGIAV   77 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~i~~~v   77 (262)
                      |+||.|.|+|++++++||+++|||++.....      ...++..++  .  .+.+.....   ......+.+..|++|.|
T Consensus        11 i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~--~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~v   80 (133)
T 3ey7_A           11 LDHLVLTVADIPTTTNFYEKVLGMKAVSFGA------GRIALEFGH--Q--KINLHQLGNEFEPKAQNVRVGSADLCFIT   80 (133)
T ss_dssp             EEEEEEEESCHHHHHHHHHHHHCCEEEEETT------TEEEEEETT--E--EEEEEETTSCCSSCCTTCCTTCCEEEEEC
T ss_pred             cCEEEEEECCHHHHHHHHHHccCceEEEecC------CeEEEEcCC--E--EEEEEcCCCCccccCCCCCCCccEEEEEe
Confidence            5799999999999999999999999987632      245555553  2  344443221   11122456788999999


Q ss_pred             CC-HHHHHHHHHHcCCeeecCCcccCC--CCeEEEEEECCCCCEEEEEEcCC
Q 024779           78 DD-VAKTVELIKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLERGP  126 (262)
Q Consensus        78 ~d-~~~~~~~l~~~G~~~~~~~~~~~~--~~~~~~~~~DP~G~~iel~~~~~  126 (262)
                      +| +++++++|+++|+++..+|....+  +..+.++|.||+||.|||++..+
T Consensus        81 ~dd~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  132 (133)
T 3ey7_A           81 DTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYSN  132 (133)
T ss_dssp             SSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESCC
T ss_pred             CcHHHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecCC
Confidence            97 999999999999998776644432  23478999999999999998753

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.78  E-value=3.4e-18  Score=121.79  Aligned_cols=115  Identities=17%  Similarity=0.092  Sum_probs=88.4

Q ss_pred             CCCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEe
Q 024779          128 PEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGT  207 (262)
Q Consensus       128 ~~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v  207 (262)
                      ..++.|+.|.|+|++++++||+++|||++.....    .+.  .+...   .+..+.+...... .....++..|++|.|
T Consensus        11 ~~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~----~~~--~~~~~---~~~~l~l~~~~~~-~~~~~~~~~~~~~~v   80 (132)
T 3sk2_A           11 TITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP----RYV--AFPSS---GDALFAIWSGGEE-PVAEIPRFSEIGIML   80 (132)
T ss_dssp             CCCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS----SEE--EEECS---TTCEEEEESSSCC-CCTTSCCCEEEEEEE
T ss_pred             cceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC----CEE--EEEcC---CCcEEEEEeCCCC-CcCCCCCcceEEEEe
Confidence            3589999999999999999999999999876532    122  23222   2345666543211 122345778999999


Q ss_pred             cC---HHHHHHHHHH---hCCeeecCCccCCCCcceEEEEeCCCCcEEEEEec
Q 024779          208 DD---VYKTAEAIKL---FGGKVTREPGPLPGINTKITACLDPDGWKTVFVDN  254 (262)
Q Consensus       208 ~d---l~~~~~~l~~---~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  254 (262)
                      +|   +++++++|++   +|+++..+|.+.++|  +.+|++|||||.|||.+.
T Consensus        81 ~~~~dv~~~~~~l~~~~~~G~~~~~~p~~~~~g--~~~~~~DPdGn~iel~~~  131 (132)
T 3sk2_A           81 PTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFG--RTFLISDPDGHIIRVCPL  131 (132)
T ss_dssp             SSHHHHHHHHHHHHHCSSSCCEEEEEEEEETTE--EEEEEECTTCCEEEEEEC
T ss_pred             CCHHHHHHHHHHHHhhhcCCCEEeeCCcccCce--EEEEEECCCCCEEEEEeC
Confidence            86   9999999999   999999888887774  889999999999999874

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.78  E-value=7.3e-18  Score=120.82  Aligned_cols=120  Identities=17%  Similarity=0.131  Sum_probs=88.6

Q ss_pred             ceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcc-cccC-CceeEEEEEec
Q 024779          131 LCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD-YDKG-NAYAQIAIGTD  208 (262)
Q Consensus       131 ~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~-~~~~~i~~~v~  208 (262)
                      ...+.|.|+|++++++||+++|||++......+ +......+..+    ...+.+....+... ...+ .+..|++|.|+
T Consensus         3 ~~~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-g~~~~~~l~~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~~v~   77 (137)
T 3itw_A            3 HMVVELAYTDPDRAVDWLVRVFGFRLLLRQPAI-GTIRHADLDTG----GGIVMVRRTGEPYTVSCAGGHTCKQVIVWVS   77 (137)
T ss_dssp             CCEEEEEESCHHHHHHHHHHHHCCEEEEEESSS-SSCSEEEEECS----SSEEEEEETTCCSSCEECCCCCCCEEEEEES
T ss_pred             eEEEEEEECCHHHHHHHHHHccCCEEEEEecCC-CcEEEEEEecC----CeEEEEEecCCCcCccCCCCCcEEEEEEEeC
Confidence            457899999999999999999999998765433 32333444432    24555554322211 1122 33349999999


Q ss_pred             CHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          209 DVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       209 dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                      |+++++++|+++|+++..+|...++|. +.++++||+||.|||++...
T Consensus        78 dv~~~~~~l~~~G~~~~~~~~~~~~g~-~~~~~~DPdG~~iel~~~~~  124 (137)
T 3itw_A           78 DVDEHFMRSTAAGADIVQPLQDKPWGL-RQYLVRDLEGHLWEFTRHLR  124 (137)
T ss_dssp             CHHHHHHHHHHTTCEEEEEEEEETTTE-EEEEEECSSSCEEEEEECC-
T ss_pred             CHHHHHHHHHHcCCeeccCccccCCCc-EEEEEECCCCCEEEEEEEcC
Confidence            999999999999999998888777753 89999999999999999754

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.77  E-value=4.2e-18  Score=123.53  Aligned_cols=124  Identities=21%  Similarity=0.372  Sum_probs=89.8

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCC--CceeEEEeeecCCCCCC------CCC--CCc
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPE--DSHFVIELTYNYGVDKY------DIG--TGF   70 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~------~~~--~~~   70 (262)
                      |+||.|.|+|++++++||+++|||++......+......+++..++.  ..+..+++.........      ..+  .++
T Consensus        10 ~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~g~   89 (148)
T 1jc4_A           10 IDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNGRAGL   89 (148)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTTCCEE
T ss_pred             eeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCCCCChHHHHHHhCCCCCce
Confidence            57999999999999999999999999876543333445667766542  11235666654322111      133  678


Q ss_pred             eeEEEEeCCHHHHHHHHHHcCCeee-cCCcccCCCCeEEEEE--ECCCCCEEEEEEcC
Q 024779           71 GHFGIAVDDVAKTVELIKAKGGKVT-REPGPVKGGNTVIAFI--EDPDGYKFELLERG  125 (262)
Q Consensus        71 ~~i~~~v~d~~~~~~~l~~~G~~~~-~~~~~~~~~~~~~~~~--~DP~G~~iel~~~~  125 (262)
                      .|++|.|+|+++++++|+++|+++. .+|....+ +.+.+++  .||+||.|||++..
T Consensus        90 ~h~~~~v~d~~~~~~~l~~~G~~~~~~~p~~~~~-g~~~~~~~~~DPdG~~iel~~~~  146 (148)
T 1jc4_A           90 HHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTG-GNRINFMHPKSGKGVLIELTQYP  146 (148)
T ss_dssp             EEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSS-SCEEEEBCGGGGTTSCEEEEECC
T ss_pred             EEEEEECCCHHHHHHHHHHCCCeecCcCcccCCC-ceEEEEEeecCCCcEEEEEEecC
Confidence            8999999999999999999999987 34544333 4455666  89999999999864

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.77  E-value=4e-18  Score=120.77  Aligned_cols=118  Identities=16%  Similarity=0.223  Sum_probs=82.7

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEec
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTD  208 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~  208 (262)
                      ..|+|+.|.|+|++++++||++ |||++...... .+.+  ..+...   ++..+.+....+  ......+..|++|.|+
T Consensus         5 ~~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~-~~~~--~~~~~~---~~~~l~l~~~~~--~~~~~~~~~~l~f~v~   75 (128)
T 3g12_A            5 LLITSITINTSHLQGMLGFYRI-IGFQFTASKVD-KGSE--VHRAVH---NGVEFSLYSIQN--PQRSQIPSLQLGFQIT   75 (128)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHH-HTCCCEEC------CC--EEEEEE---TTEEEEEEECCC--CSSCCCCSEEEEEEES
T ss_pred             ceEEEEEEEcCCHHHHHHHHHH-CCCEEecccCC-CCCE--EEEEeC---CCeEEEEEECCC--CcCCCCCceEEEEEeC
Confidence            3689999999999999999999 99998765211 1122  222211   234455543222  1122345688999999


Q ss_pred             CHHHHHHHHHHhCCe-eecCCccCCCCcceEEEEeCCCCcEEEEEecccc
Q 024779          209 DVYKTAEAIKLFGGK-VTREPGPLPGINTKITACLDPDGWKTVFVDNVDF  257 (262)
Q Consensus       209 dl~~~~~~l~~~g~~-~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~  257 (262)
                      |+++++++++++|++ +..+|...++|. + ++++|||||.|+|.+.++.
T Consensus        76 dvd~~~~~l~~~G~~~~~~~p~~~~~G~-~-~~~~DPdGn~iel~~~~~~  123 (128)
T 3g12_A           76 DLEKTVQELVKIPGAMCILDPTDMPDGK-K-AIVLDPDGHSIELCELEGH  123 (128)
T ss_dssp             CHHHHHHHHTTSTTCEEEEEEEECC-CE-E-EEEECTTCCEEEEEC----
T ss_pred             CHHHHHHHHHHCCCceeccCceeCCCcc-E-EEEECCCCCEEEEEEeccc
Confidence            999999999999999 888887777753 4 9999999999999998764

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.77  E-value=5.8e-18  Score=121.20  Aligned_cols=119  Identities=24%  Similarity=0.315  Sum_probs=86.2

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCC--CCC-CCCCCceeEEEEe
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGV--DKY-DIGTGFGHFGIAV   77 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~-~~~~~~~~i~~~v   77 (262)
                      |+||.|.|+|++++++||+++|||++..+.......+..+++. +  .  ..+.+......  +.. ..+.++.|++|.|
T Consensus         6 i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~--~--~~l~l~~~~~~~~~~~~~~~~g~~h~~f~v   80 (136)
T 2rk0_A            6 VSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-G--G--LSIVLREHDGGGTDLFDETRPGLDHLSFSV   80 (136)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-T--S--CEEEEEEETTCSSSCCCTTSSEEEEEEEEE
T ss_pred             ccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-C--C--CEEEEEeCCCCcccCCCCCCCCcceEEEEe
Confidence            5799999999999999999999999987654222223334443 2  2  24555543221  111 2345788999999


Q ss_pred             ---CCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCCC
Q 024779           78 ---DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  127 (262)
Q Consensus        78 ---~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~~  127 (262)
                         +|+++++++|+++|+++. ++.....  ++.++|.|||||.|||++..+.
T Consensus        81 ~~~~d~~~~~~~l~~~G~~~~-~~~~~~~--g~~~~~~DPdG~~iel~~~~~~  130 (136)
T 2rk0_A           81 ESMTDLDVLEERLAKAGAAFT-PTQELPF--GWILAFRDADNIALEAMLGREG  130 (136)
T ss_dssp             SSHHHHHHHHHHHHHHTCCBC-CCEEETT--EEEEEEECTTCCEEEEEEECTT
T ss_pred             CCHHHHHHHHHHHHHCCCccc-CccccCC--ceEEEEECCCCCEEEEEEcCCC
Confidence               889999999999999987 3444443  3889999999999999987543

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.77  E-value=2.4e-18  Score=124.41  Aligned_cols=112  Identities=19%  Similarity=0.246  Sum_probs=84.8

Q ss_pred             EEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecCHHHH
Q 024779          134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKT  213 (262)
Q Consensus       134 v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~dl~~~  213 (262)
                      +.|.|+|++++++||+++|||++......++.......++      .  +.+....  .......+..|++|.|+|++++
T Consensus        10 i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~------~--~~l~~~~--~~~~~~~~~~hl~f~V~d~d~~   79 (144)
T 3r6a_A           10 SRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQIS------T--ILLIAGS--EEALKPFRNTQATFLVDSLDKF   79 (144)
T ss_dssp             EEEEESCHHHHHHHHHHHTTCCCCEECCCSCSSCEEEEET------T--EEEEESC--HHHHGGGGGCCEEEEESCHHHH
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEEEeccCCccEEEEEec------c--EEEecCC--cccCCCCcceEEEEEeCCHHHH
Confidence            8899999999999999999999877654333333333322      1  3333321  1111223568999999999999


Q ss_pred             HHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecccc
Q 024779          214 AEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDF  257 (262)
Q Consensus       214 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~  257 (262)
                      +++|+++|+++..+|.+.++|  +.+|++||+||.|||++..+.
T Consensus        80 ~~~l~~~G~~v~~~p~~~~~G--~~~~~~DPdG~~iel~~~~~~  121 (144)
T 3r6a_A           80 KTFLEENGAEIIRGPSKVPTG--RNMTVRHSDGSVIEYVEHSKI  121 (144)
T ss_dssp             HHHHHHTTCEEEEEEEEETTE--EEEEEECTTSCEEEEEEECC-
T ss_pred             HHHHHHcCCEEecCCccCCCc--eEEEEECCCCCEEEEEEcCCc
Confidence            999999999999888777774  789999999999999997763

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.77  E-value=4.4e-18  Score=124.19  Aligned_cols=119  Identities=18%  Similarity=0.224  Sum_probs=88.4

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCC---cccccCCceeEEEE
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGV---TDYDKGNAYAQIAI  205 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~i~~  205 (262)
                      .+++|+.|.|+|++++++||+++|||++.....    ..  .++..+    ...+.|......   ......++..|++|
T Consensus        22 ~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~~----~~--~~l~~~----~~~l~l~~~~~~~~~~~~~~~~g~~hi~f   91 (152)
T 3huh_A           22 DRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQ----NR--KALIFG----AQKINLHQQEMEFEPKASRPTPGSADLCF   91 (152)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEETT----TE--EEEEET----TEEEEEEETTBCCSSCCSSCCTTCCEEEE
T ss_pred             ceeeEEEEEeCCHHHHHHHHHhcCCCEEEEccC----Ce--EEEEeC----CeEEEEeccCCcCCCcCcCCCCCccEEEE
Confidence            479999999999999999999999999987622    12  333332    245555543221   11223468899999


Q ss_pred             Eec-CHHHHHHHHHHhCCeeecCCccCCCCc--ceEEEEeCCCCcEEEEEecccc
Q 024779          206 GTD-DVYKTAEAIKLFGGKVTREPGPLPGIN--TKITACLDPDGWKTVFVDNVDF  257 (262)
Q Consensus       206 ~v~-dl~~~~~~l~~~g~~~~~~~~~~~~~~--~~~~~~~DP~G~~ie~~~~~~~  257 (262)
                      .+. |+++++++|+++|+++..+|...+++.  .+.+|++|||||.|||++..+-
T Consensus        92 ~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~  146 (152)
T 3huh_A           92 ITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYVEG  146 (152)
T ss_dssp             EESSCHHHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC---
T ss_pred             EecCCHHHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEecccC
Confidence            987 999999999999999998876555432  3789999999999999997653

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.77  E-value=4.5e-18  Score=118.69  Aligned_cols=113  Identities=19%  Similarity=0.134  Sum_probs=83.5

Q ss_pred             CceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecC
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDD  209 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~d  209 (262)
                      ++.|+.|.|+|++++++||+++|||++.....    .  ...+..++    ..+.+... ...+........|++|.|+|
T Consensus         5 ~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~~----~--~~~~~~~~----~~l~l~~~-~~~~~~~~~~~~~~~~~v~d   73 (118)
T 2i7r_A            5 NLNQLDIIVSNVPQVCADLEHILDKKADYAND----G--FAQFTIGS----HCLMLSQN-HLVPLENFQSGIIIHIEVED   73 (118)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----T--EEEEEETT----EEEEEESS-CSSSCCCCCSCEEEEEECSC
T ss_pred             eeeEEEEEeCCHHHHHHHHHHHhCCeeEEeCC----C--EEEEEeCC----eEEEEEcC-CCCCcccCCCeEEEEEEECC
Confidence            57899999999999999999999999875321    1  23344321    23333321 11111122233589999999


Q ss_pred             HHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEec
Q 024779          210 VYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDN  254 (262)
Q Consensus       210 l~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  254 (262)
                      +++++++|+++|+++..+|.+.++| .+.++++||+||.|||++.
T Consensus        74 ~~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~  117 (118)
T 2i7r_A           74 VDQNYKRLNELGIKVLHGPTVTDWG-TESLLVQGPAGLVLDFYRM  117 (118)
T ss_dssp             HHHHHHHHHHHTCCEEEEEEECTTS-CEEEEEECGGGCEEEEEEC
T ss_pred             HHHHHHHHHHCCCceecCCccccCc-cEEEEEECCCccEEEEEec
Confidence            9999999999999998888777765 3788999999999999975

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.77  E-value=5.8e-18  Score=119.52  Aligned_cols=115  Identities=17%  Similarity=0.162  Sum_probs=85.5

Q ss_pred             CCceeEEeee--cChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEE
Q 024779          129 EPLCQVMLRV--GDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIG  206 (262)
Q Consensus       129 ~~~~~v~l~v--~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~  206 (262)
                      .+++|+.|.|  +|++++++||+++|||++......... ....++..+    ...+.|.....    ....+..|++|.
T Consensus         9 ~~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~----~~~l~l~~~~~----~~~~~~~~~~f~   79 (126)
T 2qqz_A            9 QGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELKK-RGGCWFKCG----NQEIHIGVEQN----FNPAKRAHPAFY   79 (126)
T ss_dssp             EEEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGGGG-GCCEEEEET----TEEEEEEECTT----CCCCSSSCEEEE
T ss_pred             ceeeeEEEEcccccHHHHHHHHHhcCCCEEecCcccccC-CCceEEEeC----CEEEEEEecCC----CCCCCceEEEEE
Confidence            4689999999  899999999999999999764321100 111334432    24555654321    123577999999


Q ss_pred             ecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecc
Q 024779          207 TDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNV  255 (262)
Q Consensus       207 v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  255 (262)
                      |+|+++++++|+++|+++..+|. .++  .+.+|++||+||.|||+++.
T Consensus        80 v~d~~~~~~~l~~~G~~~~~~~~-~~g--~~~~~~~DPdG~~iel~~~~  125 (126)
T 2qqz_A           80 VLKIDEFKQELIKQGIEVIDDHA-RPD--VIRFYVSDPFGNRIEFMENK  125 (126)
T ss_dssp             ETTHHHHHHHHHHTTCCCEEECS-STT--EEEEEEECTTSCEEEEEEEC
T ss_pred             cCCHHHHHHHHHHcCCCccCCCC-CCC--eeEEEEECCCCCEEEEEeCC
Confidence            99999999999999999988773 333  58899999999999999864

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.77  E-value=6.5e-18  Score=121.77  Aligned_cols=113  Identities=16%  Similarity=0.226  Sum_probs=86.6

Q ss_pred             CCCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEe
Q 024779          128 PEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGT  207 (262)
Q Consensus       128 ~~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v  207 (262)
                      ..++.||.|.|+|++++++||+++|||++.....  +..+  .++..+.  .+..+.+...      ....+..|++|.|
T Consensus        26 i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~~~~--~~~~~~~--~~~~l~l~~~------~~~~~~~h~~~~v   93 (141)
T 3ghj_A           26 IKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDS--ARRW--NFLWVSG--RAGMVVLQEE------KENWQQQHFSFRV   93 (141)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEET--TTTE--EEEEETT--TTEEEEEEEC------CSSCCCCEEEEEE
T ss_pred             eceecEEEEEeCCHHHHHHHHHHhcCCEEEEecC--CCcE--EEEEecC--CCcEEEEecc------CCCCCCceEEEEE
Confidence            3579999999999999999999999999987643  2222  3333322  3567777653      1234678999998


Q ss_pred             c--CHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEe
Q 024779          208 D--DVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVD  253 (262)
Q Consensus       208 ~--dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~  253 (262)
                      +  |+++++++|+++|+++. .|...+++.++.+|++|||||.|||++
T Consensus        94 ~~~dld~~~~~l~~~G~~~~-~~~~~~~~~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A           94 EKSEIEPLKKALESKGVSVH-GPVNQEWMQAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             CGGGHHHHHHHHHHTTCCCE-EEEEEGGGTEEEEEEECTTCCEEEEEE
T ss_pred             eHHHHHHHHHHHHHCCCeEe-CCcccCCCCceEEEEECCCCCEEEEEE
Confidence            7  99999999999999998 444444444589999999999999985

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.77  E-value=9.5e-18  Score=122.41  Aligned_cols=117  Identities=24%  Similarity=0.351  Sum_probs=86.0

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCC---CCCCCCCCCceeEEEEe
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG---VDKYDIGTGFGHFGIAV   77 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~i~~~v   77 (262)
                      |+||.|.|+|++++++||+++|||++..+.+      ...++..++  .  .+.+.....   ........+..|++|.+
T Consensus        24 l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~~------~~~~l~~~~--~--~l~l~~~~~~~~~~~~~~~~g~~hi~f~~   93 (152)
T 3huh_A           24 IDHLVLTVSDISTTIRFYEEVLGFSAVTFKQ------NRKALIFGA--Q--KINLHQQEMEFEPKASRPTPGSADLCFIT   93 (152)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEETT------TEEEEEETT--E--EEEEEETTBCCSSCCSSCCTTCCEEEEEE
T ss_pred             eeEEEEEeCCHHHHHHHHHhcCCCEEEEccC------CeEEEEeCC--e--EEEEeccCCcCCCcCcCCCCCccEEEEEe
Confidence            5799999999999999999999999987632      245566553  2  344443221   11222455788999999


Q ss_pred             C-CHHHHHHHHHHcCCeeecCCcccCC--CCeEEEEEECCCCCEEEEEEcCCC
Q 024779           78 D-DVAKTVELIKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLERGPT  127 (262)
Q Consensus        78 ~-d~~~~~~~l~~~G~~~~~~~~~~~~--~~~~~~~~~DP~G~~iel~~~~~~  127 (262)
                      . |+++++++|+++|+++..+|....+  |..+.++|.|||||.|||.+..+.
T Consensus        94 ~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~  146 (152)
T 3huh_A           94 STPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYVEG  146 (152)
T ss_dssp             SSCHHHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC---
T ss_pred             cCCHHHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEecccC
Confidence            8 9999999999999998776654332  234889999999999999987653

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.77  E-value=5e-18  Score=123.39  Aligned_cols=117  Identities=12%  Similarity=0.072  Sum_probs=86.3

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcc-cccCCceeEEEEEe
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD-YDKGNAYAQIAIGT  207 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~i~~~v  207 (262)
                      .++.|+.|.|+|++++++||+++|||++.....    .  ..++..+   .+..+.+.......+ ....++..|++|.|
T Consensus         5 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~----~--~~~~~~~---~g~~l~l~~~~~~~~~~~~~~~~~~l~f~v   75 (148)
T 3rhe_A            5 SDPNLVLFYVKNPAKSEEFYKNLLDTQPIESSP----T--FAMFVMK---TGLRLGLWAQEEIEPKAHQTGGGMELSFQV   75 (148)
T ss_dssp             --CEEEEEEESCHHHHHHHHHHHHTCCCSEECS----S--EEEEECT---TSCEEEEEEGGGCSSCCC----CEEEEEEC
T ss_pred             ccccEEEEEeCCHHHHHHHHHHHcCCEEeccCC----C--EEEEEcC---CCcEEEEecCCcCCccccCCCCeEEEEEEc
Confidence            468999999999999999999999999876532    1  2334322   234555544322211 12345678999999


Q ss_pred             cC---HHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          208 DD---VYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       208 ~d---l~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                      +|   +++++++|+++|+++..+|...++|  +.+|++||+||.|||++..+
T Consensus        76 ~d~~dvd~~~~~l~~~G~~i~~~p~~~~~G--~~~~~~DPdG~~iel~~~~~  125 (148)
T 3rhe_A           76 NSNEMVDEIHRQWSDKEISIIQPPTQMDFG--YTFVGVDPDEHRLRIFCLKR  125 (148)
T ss_dssp             SCHHHHHHHHHHHHHTTCCEEEEEEEETTE--EEEEEECTTCCEEEEEEEC-
T ss_pred             CCHHHHHHHHHHHHhCCCEEEeCCeecCCC--cEEEEECCCCCEEEEEEcCh
Confidence            87   9999999999999999888888873  88999999999999998765

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.77  E-value=1.1e-17  Score=119.14  Aligned_cols=112  Identities=16%  Similarity=0.096  Sum_probs=84.6

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCC-
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD-   79 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d-   79 (262)
                      ++||.|.|+|++++++||+++|||++....+      ..+.+..++.   ..+.+...... ......+..|++|.|+| 
T Consensus        14 i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~---~~l~l~~~~~~-~~~~~~~~~~~~~~v~~~   83 (132)
T 3sk2_A           14 PNLQLVYVSNVERSTDFYRFIFKKEPVFVTP------RYVAFPSSGD---ALFAIWSGGEE-PVAEIPRFSEIGIMLPTG   83 (132)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHTCCCSEECS------SEEEEECSTT---CEEEEESSSCC-CCTTSCCCEEEEEEESSH
T ss_pred             eeEEEEEECCHHHHHHHHHHHcCCeEEEcCC------CEEEEEcCCC---cEEEEEeCCCC-CcCCCCCcceEEEEeCCH
Confidence            5899999999999999999999999876532      2233433321   24455543311 11233567889999986 


Q ss_pred             --HHHHHHHHHH---cCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEc
Q 024779           80 --VAKTVELIKA---KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  124 (262)
Q Consensus        80 --~~~~~~~l~~---~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  124 (262)
                        +++++++|++   +|+++..+|....+|  +.++|.|||||.|||.+.
T Consensus        84 ~dv~~~~~~l~~~~~~G~~~~~~p~~~~~g--~~~~~~DPdGn~iel~~~  131 (132)
T 3sk2_A           84 EDVDKLFNEWTKQKSHQIIVIKEPYTDVFG--RTFLISDPDGHIIRVCPL  131 (132)
T ss_dssp             HHHHHHHHHHHHCSSSCCEEEEEEEEETTE--EEEEEECTTCCEEEEEEC
T ss_pred             HHHHHHHHHHHhhhcCCCEEeeCCcccCce--EEEEEECCCCCEEEEEeC
Confidence              9999999999   999998777777653  889999999999999975

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.76  E-value=1.6e-18  Score=127.53  Aligned_cols=117  Identities=24%  Similarity=0.342  Sum_probs=88.4

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCC--------------CCcceeeEeeecCCCceeEEEeeecCCCCC-C-
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIP--------------EEKYTNAFLGYGPEDSHFVIELTYNYGVDK-Y-   64 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~-   64 (262)
                      |+||+|.|+|++++++||+++|||++..+...+              ......+++..++    ..+++......+. . 
T Consensus        20 i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~----~~leL~~~~~~~~~~~   95 (159)
T 3gm5_A           20 TVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELGP----LQLELIEPDENPSTWR   95 (159)
T ss_dssp             CEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEETT----EEEEEEEECSSSCHHH
T ss_pred             ccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecCC----EEEEEEEECCCCChhH
Confidence            689999999999999999999999876543222              1334566666653    3566665432221 1 


Q ss_pred             ----CCCCCceeEEEEeCCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCC--CCEEEEEEc
Q 024779           65 ----DIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPD--GYKFELLER  124 (262)
Q Consensus        65 ----~~~~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~--G~~iel~~~  124 (262)
                          ..+.|++|++|.|+|+++++++|+++|+++..++. .  ++.+.+|+.|||  |+.|||++.
T Consensus        96 ~~l~~~~~g~~Hiaf~v~di~~~~~~l~~~G~~~~~~~~-~--~g~~~~~~~dpd~~G~~iEl~e~  158 (159)
T 3gm5_A           96 EFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGD-F--EGGRYAYIDTLRALKVMIELLEN  158 (159)
T ss_dssp             HHHHHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEE-E--TTEEEEEESCHHHHSSEEEEEEE
T ss_pred             HHhhcCCceEEEEEEEcCCHHHHHHHHHHCCCcEeeccc-c--CCeeEEEEeccccCcEEEEEEec
Confidence                13668999999999999999999999999875532 2  257889999999  999999985

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.76  E-value=7.2e-18  Score=117.66  Aligned_cols=112  Identities=19%  Similarity=0.188  Sum_probs=82.0

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCH
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDV   80 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~   80 (262)
                      |+|+.|.|+|++++++||+++|||++....+      ..+++..++.  .  +.+......+....+.+. |++|.|+|+
T Consensus         6 i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~--~--l~l~~~~~~~~~~~~~~~-~~~~~v~d~   74 (118)
T 2i7r_A            6 LNQLDIIVSNVPQVCADLEHILDKKADYAND------GFAQFTIGSH--C--LMLSQNHLVPLENFQSGI-IIHIEVEDV   74 (118)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHTSCCSEEET------TEEEEEETTE--E--EEEESSCSSSCCCCCSCE-EEEEECSCH
T ss_pred             eeEEEEEeCCHHHHHHHHHHHhCCeeEEeCC------CEEEEEeCCe--E--EEEEcCCCCCcccCCCeE-EEEEEECCH
Confidence            5799999999999999999999999875432      1345555432  2  223221111111223344 799999999


Q ss_pred             HHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEc
Q 024779           81 AKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  124 (262)
Q Consensus        81 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  124 (262)
                      ++++++|+++|+++..+|...++ +.+.++|.||+||.|||++.
T Consensus        75 ~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~  117 (118)
T 2i7r_A           75 DQNYKRLNELGIKVLHGPTVTDW-GTESLLVQGPAGLVLDFYRM  117 (118)
T ss_dssp             HHHHHHHHHHTCCEEEEEEECTT-SCEEEEEECGGGCEEEEEEC
T ss_pred             HHHHHHHHHCCCceecCCccccC-ccEEEEEECCCccEEEEEec
Confidence            99999999999998777766665 45778999999999999874

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.76  E-value=2.7e-17  Score=118.47  Aligned_cols=110  Identities=22%  Similarity=0.307  Sum_probs=84.6

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeC--
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD--   78 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~--   78 (262)
                      |+||.|.|+|++++++||+++|||++..+..  ..  ..+++.++..  ...+.+....      ...+..|++|.|+  
T Consensus        29 i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~~--~~~~~~~~~~--~~~l~l~~~~------~~~~~~h~~~~v~~~   96 (141)
T 3ghj_A           29 LFEVAVKVKNLEKSSQFYTEILGFEAGLLDS--AR--RWNFLWVSGR--AGMVVLQEEK------ENWQQQHFSFRVEKS   96 (141)
T ss_dssp             CCEEEEEESCHHHHHHHHHHTSCCEEEEEET--TT--TEEEEEETTT--TEEEEEEECC------SSCCCCEEEEEECGG
T ss_pred             ecEEEEEeCCHHHHHHHHHHhcCCEEEEecC--CC--cEEEEEecCC--CcEEEEeccC------CCCCCceEEEEEeHH
Confidence            6899999999999999999999999987642  11  3456666543  2355665531      1235678999997  


Q ss_pred             CHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEE
Q 024779           79 DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  123 (262)
Q Consensus        79 d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~  123 (262)
                      |+++++++|+++|+++.. +.....++.+.++|.|||||.|||++
T Consensus        97 dld~~~~~l~~~G~~~~~-~~~~~~~~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A           97 EIEPLKKALESKGVSVHG-PVNQEWMQAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             GHHHHHHHHHHTTCCCEE-EEEEGGGTEEEEEEECTTCCEEEEEE
T ss_pred             HHHHHHHHHHHCCCeEeC-CcccCCCCceEEEEECCCCCEEEEEE
Confidence            999999999999999883 33334446788999999999999985

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.76  E-value=8e-18  Score=121.73  Aligned_cols=116  Identities=16%  Similarity=0.160  Sum_probs=88.5

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCccc-ccCCceeEEEEEe
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDY-DKGNAYAQIAIGT  207 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~i~~~v  207 (262)
                      .++.|+.|.|+|++++++||+++|||++.....    .+  .++..++   +..+.|.......+. ..+.+..|++|.|
T Consensus        24 ~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~~--~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~~hl~f~v   94 (144)
T 2kjz_A           24 THPDFTILYVDNPPASTQFYKALLGVDPVESSP----TF--SLFVLAN---GMKLGLWSRHTVEPKASVTGGGGELAFRV   94 (144)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHTCCCSEEET----TE--EEEECTT---SCEEEEEETTSCSSCCCCSSSSCEEEEEC
T ss_pred             CceeEEEEEeCCHHHHHHHHHHccCCEeccCCC----Ce--EEEEcCC---CcEEEEEeCCCCCCccCCCCCceEEEEEe
Confidence            489999999999999999999999999876531    12  3333321   345666543222121 2346789999999


Q ss_pred             c---CHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecc
Q 024779          208 D---DVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNV  255 (262)
Q Consensus       208 ~---dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  255 (262)
                      +   |+++++++|+++|+++..+|...++  ++.+|++||+||.|||++++
T Consensus        95 ~d~~dv~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~DPdG~~iel~~~~  143 (144)
T 2kjz_A           95 ENDAQVDETFAGWKASGVAMLQQPAKMEF--GYTFTAADPDSHRLRVYAFA  143 (144)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCCSCCEEETT--EEEEEECCTTCCEEEEEEEC
T ss_pred             CCHHHHHHHHHHHHHCCCeEecCceecCC--ceEEEEECCCCCEEEEEecC
Confidence            7   5899999999999999988877776  38899999999999999864

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.76  E-value=1.6e-17  Score=125.13  Aligned_cols=126  Identities=37%  Similarity=0.643  Sum_probs=89.1

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCC---------------CceeEEEeeecCCC---C
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPE---------------DSHFVIELTYNYGV---D   62 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~l~~~~~~~~---~   62 (262)
                      |+||.|.|+|++++++||+++|||++..+...+...+...++..++.               .....+++......   +
T Consensus        32 i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~~~~~~~~  111 (184)
T 2za0_A           32 LQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDDE  111 (184)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTGGGCT
T ss_pred             EEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEecCCCCCCc
Confidence            57999999999999999999999999876433333344445543220               01234555442210   1


Q ss_pred             --CCC----CCCCceeEEEEeCCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCCCC
Q 024779           63 --KYD----IGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTP  128 (262)
Q Consensus        63 --~~~----~~~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~~~  128 (262)
                        ...    ...++.|++|.|+|+++++++|+++|+++..++.....  .+.+||.||+||.|||++....|
T Consensus       112 ~~~~~~~~~~~~g~~hi~f~v~dvd~~~~~l~~~G~~~~~~p~~~~~--~~~~~~~DPdG~~iel~~~~~~~  181 (184)
T 2za0_A          112 TQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNKIA  181 (184)
T ss_dssp             TCCCCCSSSSSCCEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSS--TTCEEEECTTCCEEEEECTTTGG
T ss_pred             ccccccCCCCCCCeeEEEEEeCCHHHHHHHHHHCCCeeecCCcCCCc--eeEEEEECCCCCEEEEEecCccc
Confidence              111    12578899999999999999999999999877765432  35688999999999999876543

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.76  E-value=1.3e-17  Score=121.95  Aligned_cols=121  Identities=18%  Similarity=0.221  Sum_probs=87.7

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCC------CcceeeEeeecCCCceeEEEeeecCCCC-----CCCCCCC
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPE------EKYTNAFLGYGPEDSHFVIELTYNYGVD-----KYDIGTG   69 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~   69 (262)
                      |+||.|.|+|++++++||+++|||++......+.      .....+++..++.   ..+++.......     ......+
T Consensus        20 i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~l~~~~~~~~~~~~~~~~~~~   96 (156)
T 3kol_A           20 VHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDG---TILDLFGEPELSPPDPNPEKTFTR   96 (156)
T ss_dssp             CCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECTTS---CEEEEEECTTCCCSSSSTTCCCSS
T ss_pred             EeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeCCC---CEEEEEecCCCCcCCCCCCCCCCc
Confidence            6899999999999999999999999876321110      0113456665432   245555432211     1123458


Q ss_pred             ceeEEEEeC--CHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCC
Q 024779           70 FGHFGIAVD--DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  126 (262)
Q Consensus        70 ~~~i~~~v~--d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~  126 (262)
                      ..|++|.|+  |+++++++|+++|+++..+|....+  ++.+||.|||||.|||++...
T Consensus        97 ~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~DPdG~~iel~~~~~  153 (156)
T 3kol_A           97 AYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPT--GRGVYFYDPDGFMIEIRCDPE  153 (156)
T ss_dssp             CCEEEEECCGGGHHHHHHHHHHTTCCEEEEEEEC-C--CEEEEEECTTSCEEEEEECCC
T ss_pred             eEEEEEEecHHHHHHHHHHHHHCCCccccCceecCC--ccEEEEECCCCCEEEEEecCC
Confidence            899999999  9999999999999999776665543  358999999999999998754

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.75  E-value=2.1e-17  Score=118.77  Aligned_cols=115  Identities=17%  Similarity=0.223  Sum_probs=84.3

Q ss_pred             CceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCcccee---eeeccCCCCcceEEEEeeecCCcccccCCceeEEEEE
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTI---AMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIG  206 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~  206 (262)
                      +++|+.|.|+|++++++||+++|||++.....  +..+..   .++..+    +..+.+.....    .+..+..|++|.
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~~~~~g----~~~l~l~~~~~----~~~~~~~h~~~~   73 (139)
T 1r9c_A            4 GLSHMTFIVRDLERMTRILEGVFDAREVYASD--TEQFSLSREKFFLIG----DIWVAIMQGEK----LAERSYNHIAFK   73 (139)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEEEGG--GSTTCCSCEEEEEET----TEEEEEEECCC----CSSCCSCEEEEE
T ss_pred             eEEEEEEEeCCHHHHHHHHHHhhCCEEeecCC--CccccccceEEEEEC----CEEEEEEeCCC----CCCCCeeEEEEE
Confidence            58999999999999999999999999876532  111110   033322    24566664321    114578899999


Q ss_pred             ec--CHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecc
Q 024779          207 TD--DVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNV  255 (262)
Q Consensus       207 v~--dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  255 (262)
                      |+  |+++++++|+++|+++..+|...+++ ++.+|++||+||.|||++.+
T Consensus        74 v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~~DPdG~~iel~~~~  123 (139)
T 1r9c_A           74 IDDADFDRYAERVGKLGLDMRPPRPRVEGE-GRSIYFYDDDNHMFELHTGT  123 (139)
T ss_dssp             CCGGGHHHHHHHHHHHTCCBCCCCC------CCEEEEECTTSCEEEEECCC
T ss_pred             cCHHHHHHHHHHHHHCCCcccCCcccCCCC-eEEEEEECCCCCEEEEEeCC
Confidence            98  99999999999999998876655543 48899999999999999864

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.75  E-value=1.3e-17  Score=119.91  Aligned_cols=119  Identities=21%  Similarity=0.316  Sum_probs=85.8

Q ss_pred             CceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecC
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDD  209 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~d  209 (262)
                      .+.++.|.|+|++++++||+++|||++...... +..+...++..+.  ....+++.......+...+.+..|++|.|+|
T Consensus        11 ~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~--~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~d   87 (139)
T 1twu_A           11 AQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGLPH--ADYHLEFTQYEGGSTAPVPHPDSLLVFYVPN   87 (139)
T ss_dssp             SCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEE-ETTEEEEEEESSS--SSEEEEEEEETTCCCCCCCCTTCEEEEECCC
T ss_pred             ceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccC-CCCeeEEEEecCC--CceEEEEeecCCCCCCCCCCCccEEEEEeCC
Confidence            467888999999999999999999998765332 2234455565432  3345677654433233344577899999999


Q ss_pred             H---HHHHHHHHHhCCeeecC--CccCCCCcceEEEEeCCCCcEEEEEecc
Q 024779          210 V---YKTAEAIKLFGGKVTRE--PGPLPGINTKITACLDPDGWKTVFVDNV  255 (262)
Q Consensus       210 l---~~~~~~l~~~g~~~~~~--~~~~~~~~~~~~~~~DP~G~~ie~~~~~  255 (262)
                      +   ++++++|+++|+++..+  +.....  +  .|++|||||.|||+++.
T Consensus        88 ~~~l~~~~~~l~~~G~~~~~~~~~~~~~~--g--~~~~DPdG~~iel~~~~  134 (139)
T 1twu_A           88 AVELAAITSKLKHMGYQEVESENPYWSNG--G--VTIEDPDGWRIVFMNSK  134 (139)
T ss_dssp             HHHHHHHHHHHHHTTCCEECCSSHHHHSS--E--EEEECTTCCEEEEESSC
T ss_pred             cchHHHHHHHHHHcCCcCcCCCCcccCCC--C--eEEECCCCCEEEEEEcC
Confidence            9   99999999999998833  222122  2  37999999999999864

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.75  E-value=2e-17  Score=118.80  Aligned_cols=113  Identities=19%  Similarity=0.331  Sum_probs=81.8

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcce---eeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEe
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYT---NAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV   77 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v   77 (262)
                      |+||.|.|+|++++.+||+++|||++..+..  ...+.   ..++..++    ..+.+......+    ..+..|++|.|
T Consensus         5 i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~~~~~g~----~~l~l~~~~~~~----~~~~~h~~~~v   74 (139)
T 1r9c_A            5 LSHMTFIVRDLERMTRILEGVFDAREVYASD--TEQFSLSREKFFLIGD----IWVAIMQGEKLA----ERSYNHIAFKI   74 (139)
T ss_dssp             EEEEEEEESCHHHHHHHHHHHHCCEEEEEGG--GSTTCCSCEEEEEETT----EEEEEEECCCCS----SCCSCEEEEEC
T ss_pred             EEEEEEEeCCHHHHHHHHHHhhCCEEeecCC--CccccccceEEEEECC----EEEEEEeCCCCC----CCCeeEEEEEc
Confidence            5899999999999999999999999887532  11111   01454442    245555432111    45778999999


Q ss_pred             C--CHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEc
Q 024779           78 D--DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  124 (262)
Q Consensus        78 ~--d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  124 (262)
                      +  |+++++++|+++|+++..++.... ++.+.++|.||+||.|||++.
T Consensus        75 ~~~d~~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~~DPdG~~iel~~~  122 (139)
T 1r9c_A           75 DDADFDRYAERVGKLGLDMRPPRPRVE-GEGRSIYFYDDDNHMFELHTG  122 (139)
T ss_dssp             CGGGHHHHHHHHHHHTCCBCCCCC------CCEEEEECTTSCEEEEECC
T ss_pred             CHHHHHHHHHHHHHCCCcccCCcccCC-CCeEEEEEECCCCCEEEEEeC
Confidence            9  999999999999999886654444 356789999999999999975

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.75  E-value=1.3e-17  Score=116.37  Aligned_cols=111  Identities=14%  Similarity=0.122  Sum_probs=84.2

Q ss_pred             CceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecC
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDD  209 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~d  209 (262)
                      .+ |+.|.|+|++++++||+++|||++....    + . ...+..+ ......+.+....     ...++..|++|.|+|
T Consensus         8 ~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~~----~-~-~~~~~~~-~~~~~~l~l~~~~-----~~~~~~~~~~~~v~d   74 (119)
T 2pjs_A            8 RV-VANIATPEPARAQAFYGDILGMPVAMDH----G-W-IVTHASP-LEAHAQVSFAREG-----GSGTDVPDLSIEVDN   74 (119)
T ss_dssp             EE-EEEEECSCGGGGHHHHTTTTCCCEEEEC----S-S-EEEEEEE-EEEEEEEEEESSS-----BTTBCCCSEEEEESC
T ss_pred             EE-EEEEEcCCHHHHHHHHHHhcCCEEEecC----C-E-EEEEecC-CCCcEEEEEEcCC-----CCCCceeEEEEEECC
Confidence            56 9999999999999999999999987631    1 1 1223321 1113445554321     123467899999999


Q ss_pred             HHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEec
Q 024779          210 VYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDN  254 (262)
Q Consensus       210 l~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  254 (262)
                      +++++++|+++|+++..+|.+.++| .+.+|++||+||.|||++.
T Consensus        75 ~~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           75 FDEVHARILKAGLPIEYGPVTEAWG-VQRLFLRDPFGKLINILSH  118 (119)
T ss_dssp             HHHHHHHHHHTTCCCSEEEEECTTS-CEEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHHHHCCCccccCCccCCCc-cEEEEEECCCCCEEEEEec
Confidence            9999999999999999888777765 4889999999999999985

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.75  E-value=3.4e-17  Score=115.27  Aligned_cols=109  Identities=15%  Similarity=0.074  Sum_probs=84.4

Q ss_pred             ceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecCH
Q 024779          131 LCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDV  210 (262)
Q Consensus       131 ~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~dl  210 (262)
                      ..|+.|.|+|++++++||+++|||++....    ..+  ..+..+    ...+.+.....    ...++..|++|.|+|+
T Consensus         6 ~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~----~~~--~~~~~~----~~~l~l~~~~~----~~~~~~~~~~~~v~dv   71 (124)
T 1xrk_A            6 SAVPVLTARDVAEAVEFWTDRLGFSRVFVE----DDF--AGVVRD----DVTLFISAVQD----QVVPDNTQAWVWVRGL   71 (124)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEEC----SSE--EEEEET----TEEEEEEECSC----TTTGGGCEEEEEEECH
T ss_pred             ceeEEEEcCCHHHHHHHHHHccCceEEecC----CCE--EEEEEC----CEEEEEEcCCC----CCCCCceEEEEEECCH
Confidence            468999999999999999999999997651    122  333322    34566654321    1223457999999999


Q ss_pred             HHHHHHHHHh------CC--eeecCCccCCCCcceEEEEeCCCCcEEEEEecc
Q 024779          211 YKTAEAIKLF------GG--KVTREPGPLPGINTKITACLDPDGWKTVFVDNV  255 (262)
Q Consensus       211 ~~~~~~l~~~------g~--~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  255 (262)
                      ++++++|+++      |+  ++..+|.+.++|  +.+|++||+||.|||.+..
T Consensus        72 ~~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g--~~~~~~DPdG~~iel~~~~  122 (124)
T 1xrk_A           72 DELYAEWSEVVSTNFRDASGPAMTEIVEQPWG--REFALRDPAGNCVHFVAEE  122 (124)
T ss_dssp             HHHHHHHTTTSBSCTTTCSSCEECCCEEETTE--EEEEEECTTCCEEEEEEC-
T ss_pred             HHHHHHHHHhcccccCCccccccCCceecCCC--CEEEEECCCCCEEEEEEec
Confidence            9999999999      99  888888877774  8999999999999999864

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.75  E-value=2.6e-17  Score=119.02  Aligned_cols=114  Identities=18%  Similarity=0.226  Sum_probs=85.8

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCC-CCCCCceeEEEEeC-
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKY-DIGTGFGHFGIAVD-   78 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~i~~~v~-   78 (262)
                      |.||.|.|+|++++++||+++|||++..+..      ..+++..++ .  ..+.+.......+. ..+.+..|++|.|+ 
T Consensus        26 l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~-~--~~l~l~~~~~~~~~~~~~~~~~hl~f~v~d   96 (144)
T 2kjz_A           26 PDFTILYVDNPPASTQFYKALLGVDPVESSP------TFSLFVLAN-G--MKLGLWSRHTVEPKASVTGGGGELAFRVEN   96 (144)
T ss_dssp             CCEEEEEESCHHHHHHHHHHHHTCCCSEEET------TEEEEECTT-S--CEEEEEETTSCSSCCCCSSSSCEEEEECSS
T ss_pred             eeEEEEEeCCHHHHHHHHHHccCCEeccCCC------CeEEEEcCC-C--cEEEEEeCCCCCCccCCCCCceEEEEEeCC
Confidence            5799999999999999999999999876542      234555543 2  23455543222221 23457889999998 


Q ss_pred             --CHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcC
Q 024779           79 --DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        79 --d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                        |+++++++|+++|+++..+|....+ + +.++|.||+||.|||+++.
T Consensus        97 ~~dv~~~~~~l~~~G~~~~~~~~~~~~-g-~~~~~~DPdG~~iel~~~~  143 (144)
T 2kjz_A           97 DAQVDETFAGWKASGVAMLQQPAKMEF-G-YTFTAADPDSHRLRVYAFA  143 (144)
T ss_dssp             HHHHHHHHHHHHHTTCCCCSCCEEETT-E-EEEEECCTTCCEEEEEEEC
T ss_pred             HHHHHHHHHHHHHCCCeEecCceecCC-c-eEEEEECCCCCEEEEEecC
Confidence              5899999999999999877766554 3 7889999999999999763

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.75  E-value=3e-17  Score=116.88  Aligned_cols=115  Identities=20%  Similarity=0.291  Sum_probs=83.3

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcce---eeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEe
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYT---NAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV   77 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v   77 (262)
                      |+||.|.|+|++++.+||+++|||++.....  ...+.   ..++..+.    ..+.+......    ...+..|++|.|
T Consensus         5 i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~~~~~~~~~~~~~~~~----~~l~l~~~~~~----~~~~~~h~~~~v   74 (133)
T 2p7o_A            5 LSHITLIVKDLNKTTAFLQNIFNAEEIYSSG--DKTFSLSKEKFFLIAG----LWICIMEGDSL----QERTYNHIAFQI   74 (133)
T ss_dssp             EEEEEEEESCHHHHHHHHHHHHCCEECC-------CCCSSCEEEEEETT----EEEEEEECSSC----CCCCSCEEEEEC
T ss_pred             EEEEEEEcCCHHHHHHHHHHhcCCEEeeecC--CcccccCCceEEEeCC----EEEEEecCCCC----CCCCeeEEEEEc
Confidence            5799999999999999999999999875432  11100   11455442    24555543211    145778999999


Q ss_pred             C--CHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCC
Q 024779           78 D--DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  126 (262)
Q Consensus        78 ~--d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~  126 (262)
                      +  |+++++++|+++|+++..++....+ +.+.++|.||+||.|||++...
T Consensus        75 ~~~d~~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~~~  124 (133)
T 2p7o_A           75 QSEEVDEYTERIKALGVEMKPERPRVQG-EGRSIYFYDFDNHLFELHAGTL  124 (133)
T ss_dssp             CGGGHHHHHHHHHHHTCCEECCCCCCTT-CCCEEEEECSSSCEEEEECSSC
T ss_pred             CHHHHHHHHHHHHHCCCcccCCCccCCC-CeeEEEEECCCCCEEEEEcCCh
Confidence            5  9999999999999999877654443 4578999999999999998643

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.74  E-value=1.3e-17  Score=119.76  Aligned_cols=119  Identities=17%  Similarity=0.119  Sum_probs=89.1

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeec------CCcccccCCceeE
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNY------GVTDYDKGNAYAQ  202 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~~~~~~  202 (262)
                      .++.|+.|.|+|++++++||++ |||++.....  +..+  ..+...   +...+.+....      +......+.+..|
T Consensus         3 ~~l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~--~~~~--~~~~~~---~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~   74 (138)
T 2a4x_A            3 ARISLFAVVVEDMAKSLEFYRK-LGVEIPAEAD--SAPH--TEAVLD---GGIRLAWDTVETVRSYDPEWQAPTGGHRFA   74 (138)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHT-TTCCCCGGGG--GCSE--EEEECT---TSCEEEEEEHHHHHHHCTTCCCCBSSCSEE
T ss_pred             ceeeEEEEEECCHHHHHHHHHH-cCCcEEecCC--CCce--EEEEcC---CCeEEEEecCccchhhCcccCCCCCCCeEE
Confidence            3688999999999999999998 9999875432  1112  223321   23456665421      1111233467899


Q ss_pred             EEEEec---CHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          203 IAIGTD---DVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       203 i~~~v~---dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                      ++|.|+   |+++++++|+++|+++..+|...++| .+.+|++||+||.|||++..+
T Consensus        75 l~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~~  130 (138)
T 2a4x_A           75 IAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWG-QRYAIVKDPDGNVVDLFAPLP  130 (138)
T ss_dssp             EEEECSSHHHHHHHHHHHHHTTCCEEEEEEEETTT-EEEEEEECTTCCEEEEEEECT
T ss_pred             EEEEeCCHHHHHHHHHHHHHCCCceeeCCcccCCC-cEEEEEECCCCCEEEEEeCCc
Confidence            999999   99999999999999999888777765 478999999999999999773

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.74  E-value=2.1e-17  Score=120.38  Aligned_cols=118  Identities=20%  Similarity=0.239  Sum_probs=90.5

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCC-----cccccCCceeEE
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGV-----TDYDKGNAYAQI  203 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~~~~~i  203 (262)
                      .++.|+.|.|+|++++++||+++|||++....    .  ...++..+    +..+.|......     .+...+.+..|+
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~----~--~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~l   73 (150)
T 3bqx_A            4 QQVAVITLGIGDLEASARFYGEGFGWAPVFRN----P--EIIFYQMN----GFVLATWLVQNLQEDVGVAVTSRPGSMAL   73 (150)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHTSCCCCSEEC----S--SEEEEECS----SSEEEEEEHHHHHHHHSSCCCSSCCSCEE
T ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEeecCC----C--CEEEEEcC----CEEEEEEeccccccccCCCCCCCCCeEEE
Confidence            47899999999999999999999999987653    1  22334432    345666653211     011124577899


Q ss_pred             EEEe---cCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecccc
Q 024779          204 AIGT---DDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDF  257 (262)
Q Consensus       204 ~~~v---~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~  257 (262)
                      +|.|   +|+++++++|+++|+++..+|...++| .+.+|++||+||.|||++.+..
T Consensus        74 ~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~~~  129 (150)
T 3bqx_A           74 AHNVRAETEVAPLMERLVAAGGQLLRPADAPPHG-GLRGYVADPDGHIWEIAFNPVW  129 (150)
T ss_dssp             EEECSSGGGHHHHHHHHHHTTCEEEEEEECCTTS-SEEEEEECTTCCEEEEEECTTS
T ss_pred             EEEeCCHHHHHHHHHHHHHCCCEEecCCcccCCC-CEEEEEECCCCCEEEEEeCCCc
Confidence            9999   899999999999999999888777765 3889999999999999987653

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.74  E-value=3.5e-17  Score=116.57  Aligned_cols=117  Identities=17%  Similarity=0.224  Sum_probs=85.8

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCcccee---eeeccCCCCcceEEEEeeecCCcccccCCceeEEEE
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTI---AMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAI  205 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~  205 (262)
                      .++.|+.|.|+|++++++||+++|||++.....  +..+..   .++..+    +..+.+.....    ...++..|++|
T Consensus         3 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~~~~~~~~~~~~~~~----~~~l~l~~~~~----~~~~~~~h~~~   72 (133)
T 2p7o_A            3 SGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSG--DKTFSLSKEKFFLIA----GLWICIMEGDS----LQERTYNHIAF   72 (133)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHHHCCEECC-------CCCSSCEEEEEET----TEEEEEEECSS----CCCCCSCEEEE
T ss_pred             ceEEEEEEEcCCHHHHHHHHHHhcCCEEeeecC--CcccccCCceEEEeC----CEEEEEecCCC----CCCCCeeEEEE
Confidence            368999999999999999999999999875432  111110   123322    24566654221    12467889999


Q ss_pred             Ee--cCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          206 GT--DDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       206 ~v--~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                      .|  +|+++++++|+++|+++..+|...+++ ++.+|++||+||.|||++...
T Consensus        73 ~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~~DPdG~~iel~~~~~  124 (133)
T 2p7o_A           73 QIQSEEVDEYTERIKALGVEMKPERPRVQGE-GRSIYFYDFDNHLFELHAGTL  124 (133)
T ss_dssp             ECCGGGHHHHHHHHHHHTCCEECCCCCCTTC-CCEEEEECSSSCEEEEECSSC
T ss_pred             EcCHHHHHHHHHHHHHCCCcccCCCccCCCC-eeEEEEECCCCCEEEEEcCCh
Confidence            99  599999999999999999887655443 488999999999999998754

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.74  E-value=2.6e-17  Score=119.57  Aligned_cols=116  Identities=15%  Similarity=0.123  Sum_probs=84.9

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCC-CCCCCCceeEEEEeCC
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDK-YDIGTGFGHFGIAVDD   79 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~i~~~v~d   79 (262)
                      |+||.|.|+|++++++||+++|||++....+      ..+++..++.   ..+.+.......+ .....+..|++|.|+|
T Consensus         7 i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~------~~~~~~~~~g---~~l~l~~~~~~~~~~~~~~~~~~l~f~v~d   77 (148)
T 3rhe_A            7 PNLVLFYVKNPAKSEEFYKNLLDTQPIESSP------TFAMFVMKTG---LRLGLWAQEEIEPKAHQTGGGMELSFQVNS   77 (148)
T ss_dssp             CEEEEEEESCHHHHHHHHHHHHTCCCSEECS------SEEEEECTTS---CEEEEEEGGGCSSCCC----CEEEEEECSC
T ss_pred             ccEEEEEeCCHHHHHHHHHHHcCCEEeccCC------CEEEEEcCCC---cEEEEecCCcCCccccCCCCeEEEEEEcCC
Confidence            6899999999999999999999999876532      2445554322   2445543322221 1233466789999987


Q ss_pred             ---HHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCCC
Q 024779           80 ---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  127 (262)
Q Consensus        80 ---~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~~  127 (262)
                         +++++++|+++|+++..+|....+ + +.++|.||+||.|||++..+.
T Consensus        78 ~~dvd~~~~~l~~~G~~i~~~p~~~~~-G-~~~~~~DPdG~~iel~~~~~~  126 (148)
T 3rhe_A           78 NEMVDEIHRQWSDKEISIIQPPTQMDF-G-YTFVGVDPDEHRLRIFCLKRT  126 (148)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEEEETT-E-EEEEEECTTCCEEEEEEEC--
T ss_pred             HHHHHHHHHHHHhCCCEEEeCCeecCC-C-cEEEEECCCCCEEEEEEcChh
Confidence               999999999999999877777665 3 889999999999999987654

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.74  E-value=5e-17  Score=114.67  Aligned_cols=113  Identities=19%  Similarity=0.262  Sum_probs=83.8

Q ss_pred             CceEEEEe--CCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeC
Q 024779            1 MLHVVYRV--GDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD   78 (262)
Q Consensus         1 l~hv~l~v--~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~   78 (262)
                      |+||.|.|  +|++++.+||+++|||++..+..... .....++..++  .  .+.+.....    ....+..|++|.|+
T Consensus        11 i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~--~--~l~l~~~~~----~~~~~~~~~~f~v~   81 (126)
T 2qqz_A           11 IDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELK-KRGGCWFKCGN--Q--EIHIGVEQN----FNPAKRAHPAFYVL   81 (126)
T ss_dssp             EEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGGG-GGCCEEEEETT--E--EEEEEECTT----CCCCSSSCEEEEET
T ss_pred             eeeEEEEcccccHHHHHHHHHhcCCCEEecCccccc-CCCceEEEeCC--E--EEEEEecCC----CCCCCceEEEEEcC
Confidence            57999999  89999999999999999876432100 11235666553  2  344444211    11246789999999


Q ss_pred             CHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcC
Q 024779           79 DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        79 d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                      |+++++++|+++|+++..++.  .+ +.+.++|.|||||.|||+++.
T Consensus        82 d~~~~~~~l~~~G~~~~~~~~--~~-g~~~~~~~DPdG~~iel~~~~  125 (126)
T 2qqz_A           82 KIDEFKQELIKQGIEVIDDHA--RP-DVIRFYVSDPFGNRIEFMENK  125 (126)
T ss_dssp             THHHHHHHHHHTTCCCEEECS--ST-TEEEEEEECTTSCEEEEEEEC
T ss_pred             CHHHHHHHHHHcCCCccCCCC--CC-CeeEEEEECCCCCEEEEEeCC
Confidence            999999999999999876652  23 568899999999999999864

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.74  E-value=1.2e-16  Score=114.39  Aligned_cols=118  Identities=16%  Similarity=0.143  Sum_probs=85.8

Q ss_pred             eEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCC--CCCCCCCceeEEEEeCCH
Q 024779            3 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD--KYDIGTGFGHFGIAVDDV   80 (262)
Q Consensus         3 hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~i~~~v~d~   80 (262)
                      .|.|.|+|++++++||+++|||++..+...+ +....+.+..++  .  .+.+.......  ....+.+..|++|.|+|+
T Consensus         5 ~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-g~~~~~~l~~~~--~--~l~l~~~~~~~~~~~~~~~~~~~~~~~v~dv   79 (137)
T 3itw_A            5 VVELAYTDPDRAVDWLVRVFGFRLLLRQPAI-GTIRHADLDTGG--G--IVMVRRTGEPYTVSCAGGHTCKQVIVWVSDV   79 (137)
T ss_dssp             EEEEEESCHHHHHHHHHHHHCCEEEEEESSS-SSCSEEEEECSS--S--EEEEEETTCCSSCEECCCCCCCEEEEEESCH
T ss_pred             EEEEEECCHHHHHHHHHHccCCEEEEEecCC-CcEEEEEEecCC--e--EEEEEecCCCcCccCCCCCcEEEEEEEeCCH
Confidence            6899999999999999999999998765433 333344454443  2  34444322111  111223334899999999


Q ss_pred             HHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCC
Q 024779           81 AKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  126 (262)
Q Consensus        81 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~  126 (262)
                      ++++++|+++|+++..++....+ +.+.++|.||+||.|+|.+..+
T Consensus        80 ~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~  124 (137)
T 3itw_A           80 DEHFMRSTAAGADIVQPLQDKPW-GLRQYLVRDLEGHLWEFTRHLR  124 (137)
T ss_dssp             HHHHHHHHHTTCEEEEEEEEETT-TEEEEEEECSSSCEEEEEECC-
T ss_pred             HHHHHHHHHcCCeeccCccccCC-CcEEEEEECCCCCEEEEEEEcC
Confidence            99999999999999887776665 5688999999999999998754

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.74  E-value=1.5e-17  Score=117.86  Aligned_cols=116  Identities=17%  Similarity=0.224  Sum_probs=78.2

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCH
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDV   80 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~   80 (262)
                      |+||.|.|+|++++++||++ |||++..... ..+.  .+++...+ ..  .+.+.....  ......+..+++|.|+|+
T Consensus         7 i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~-~~~~--~~~~~~~~-~~--~l~l~~~~~--~~~~~~~~~~l~f~v~dv   77 (128)
T 3g12_A            7 ITSITINTSHLQGMLGFYRI-IGFQFTASKV-DKGS--EVHRAVHN-GV--EFSLYSIQN--PQRSQIPSLQLGFQITDL   77 (128)
T ss_dssp             EEEEEEEESCHHHHHHHHHH-HTCCCEEC------C--CEEEEEET-TE--EEEEEECCC--CSSCCCCSEEEEEEESCH
T ss_pred             EEEEEEEcCCHHHHHHHHHH-CCCEEecccC-CCCC--EEEEEeCC-Ce--EEEEEECCC--CcCCCCCceEEEEEeCCH
Confidence            57999999999999999999 9999876521 1111  23333111 22  334432211  112223446799999999


Q ss_pred             HHHHHHHHHcCCe-eecCCcccCCCCeEEEEEECCCCCEEEEEEcCCC
Q 024779           81 AKTVELIKAKGGK-VTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  127 (262)
Q Consensus        81 ~~~~~~l~~~G~~-~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~~  127 (262)
                      ++++++|+++|++ +..+|...++ +.+ ++|.|||||.|+|.+..+.
T Consensus        78 d~~~~~l~~~G~~~~~~~p~~~~~-G~~-~~~~DPdGn~iel~~~~~~  123 (128)
T 3g12_A           78 EKTVQELVKIPGAMCILDPTDMPD-GKK-AIVLDPDGHSIELCELEGH  123 (128)
T ss_dssp             HHHHHHHTTSTTCEEEEEEEECC--CEE-EEEECTTCCEEEEEC----
T ss_pred             HHHHHHHHHCCCceeccCceeCCC-ccE-EEEECCCCCEEEEEEeccc
Confidence            9999999999999 7777766665 445 8999999999999987653

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.74  E-value=1.1e-16  Score=114.19  Aligned_cols=115  Identities=23%  Similarity=0.265  Sum_probs=82.3

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeC--
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD--   78 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~--   78 (262)
                      |+||.|.|+|++++++||+++|||++.....      ....+..+.  ..+.+.+..  ....+ ...+..|++|.+.  
T Consensus        10 i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~g--~~~~l~~~~--~~~~~-~~~~~~h~~~~~~~~   78 (135)
T 3rri_A           10 VFHLAIPARDLDEAYDFYVTKLGCKLARRYP------DRITLDFFG--DQLVCHLSD--RWDRE-VSMYPRHFGITFRDK   78 (135)
T ss_dssp             EEEEEEEESCHHHHHHHHTTTTCCEEEEEET------TEEEEEETT--EEEEEEECS--CSCSS-CCSSSCEEEEECSSH
T ss_pred             cceEEEEcCCHHHHHHHHHHhcCCEeeccCC------CcEEEEEeC--CEEEEEEcC--ccccc-CCCCCCeEEEEEcCh
Confidence            5899999999999999999999999966543      233443322  223333322  11111 3346778999986  


Q ss_pred             -CHHHHHHHHHHcCCeeecCCccc---CCCCeEEEEEECCCCCEEEEEEcCC
Q 024779           79 -DVAKTVELIKAKGGKVTREPGPV---KGGNTVIAFIEDPDGYKFELLERGP  126 (262)
Q Consensus        79 -d~~~~~~~l~~~G~~~~~~~~~~---~~~~~~~~~~~DP~G~~iel~~~~~  126 (262)
                       |+++++++|+++|+++..+|...   ..+..+.++|.|||||.|||.+..+
T Consensus        79 ~d~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~~~  130 (135)
T 3rri_A           79 KHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYYFD  130 (135)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEESS
T ss_pred             HhHHHHHHHHHHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEECC
Confidence             59999999999999987666542   2345678999999999999998643

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.73  E-value=1.3e-17  Score=122.90  Aligned_cols=120  Identities=17%  Similarity=0.176  Sum_probs=87.8

Q ss_pred             CCCCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCC--------cccccCC
Q 024779          127 TPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGV--------TDYDKGN  198 (262)
Q Consensus       127 ~~~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--------~~~~~~~  198 (262)
                      ...++.|+.|.|+|++++++||+++|||++......     ...++..+    ...+.+......        .+...+.
T Consensus         5 ~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~-----~~~~~~~g----~~~~~l~~~~~~~~~~~~~~~~~~~~~   75 (160)
T 3r4q_A            5 PPSAIMETALYADDLDAAEAFYRDVFGLEMVLKLPG-----QLVFFKCG----RQMLLLFDPQESSRADANNPIPRHGAV   75 (160)
T ss_dssp             CCSCEEEEEEECSCHHHHHHHHHHHSCCEEEEEETT-----TEEEEEET----TEEEEEECHHHHTCCCTTCCSCCCEEE
T ss_pred             ccccccEEEEEeCCHHHHHHHHHHhcCCEEEEecCC-----cEEEEeCC----CEEEEEEecCCccCccccCCCCcCCCc
Confidence            346899999999999999999999999999875431     12333322    234444432111        1122235


Q ss_pred             ceeEEEEEe---cCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecccc
Q 024779          199 AYAQIAIGT---DDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDF  257 (262)
Q Consensus       199 ~~~~i~~~v---~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~  257 (262)
                      +..|++|.|   +|+++++++|+++|+++..++.. +++ ++.+|++||+||.|||++++..
T Consensus        76 g~~hi~f~V~~~~dld~~~~~l~~~G~~~~~~~~~-~~g-~~~~~~~DPdG~~iel~~~~~~  135 (160)
T 3r4q_A           76 GQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHRW-PNG-SYSVYIRDPAGNSVEVGEGKLW  135 (160)
T ss_dssp             EECEEEEEESSHHHHHHHHHHHHTTTCCCCEEEEC-TTS-CEEEEEECTTCCEEEEEEGGGG
T ss_pred             ceeEEEEEeCCHHHHHHHHHHHHHCCCEEeccccc-cCC-cEEEEEECCCCCEEEEEeCCCC
Confidence            779999999   89999999999999999865533 333 5899999999999999998754

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.73  E-value=1.3e-16  Score=114.06  Aligned_cols=109  Identities=23%  Similarity=0.386  Sum_probs=83.0

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeC--
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD--   78 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~--   78 (262)
                      |+||.|.|+|++++.+||+++|||++.....      ...++..+.  .  .+.+......  .....+..|++|.|+  
T Consensus         5 i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~--~--~l~l~~~~~~--~~~~~~~~h~~~~v~~~   72 (135)
T 1nki_A            5 LNHLTLAVADLPASIAFYRDLLGFRLEARWD------QGAYLELGS--L--WLCLSREPQY--GGPAADYTHYAFGIAAA   72 (135)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEEETT--E--EEEEEECTTC--CCCCSSSCEEEEEECHH
T ss_pred             EeEEEEEeCCHHHHHHHHHHhcCCEEEEcCC------CceEEecCC--E--EEEEEeCCCC--CCCCCCcceEEEEccHH
Confidence            5799999999999999999999999987642      134555543  2  3445443211  223457789999998  


Q ss_pred             CHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcC
Q 024779           79 DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        79 d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                      |+++++++|+++|+++..++..    +.+.+++.||+||.|||++..
T Consensus        73 d~~~~~~~l~~~G~~~~~~~~~----~~~~~~~~DPdG~~iel~~~~  115 (135)
T 1nki_A           73 DFARFAAQLRAHGVREWKQNRS----EGDSFYFLDPDGHRLEAHVGD  115 (135)
T ss_dssp             HHHHHHHHHHHTTCCEEECCCS----SSCEEEEECTTCCEEEEESCC
T ss_pred             HHHHHHHHHHHCCCceecCCCC----CeEEEEEECCCCCEEEEEECC
Confidence            9999999999999998876532    346789999999999999754

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.73  E-value=3.9e-17  Score=116.60  Aligned_cols=114  Identities=16%  Similarity=0.154  Sum_probs=81.6

Q ss_pred             eeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecCHH
Q 024779          132 CQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVY  211 (262)
Q Consensus       132 ~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~dl~  211 (262)
                      .+..|.|+|++++++||+++|||++.....      ...++..+    ...+.|.........+...+..|++|.|+|++
T Consensus         9 ~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~l~~~----~~~l~l~~~~~~~~~~~~~~~~~l~~~v~dv~   78 (134)
T 3fcd_A            9 ITPFLHIPDMQEALTLFCDTLGFELKYRHS------NYAYLELS----GCGLRLLEEPARKIIPDGIARVAICIDVSDID   78 (134)
T ss_dssp             EEEEEEESCHHHHHHHHTTTTCCEEEEEET------TEEEEEET----TEEEEEEECCCC---------EEEEEECSCHH
T ss_pred             ceeEEEECCHHHHHHHHHhccCcEEEEeCC------CeEEEEEC----CEEEEEEeCCCCCcCCCCCceEEEEEEeCCHH
Confidence            457899999999999999999999986532      13444432    35666665433222222335579999999999


Q ss_pred             HHHHHHHHhC----CeeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          212 KTAEAIKLFG----GKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       212 ~~~~~l~~~g----~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                      +++++|+++|    +++..+|...++| .+.++++|||||.|||.+...
T Consensus        79 ~~~~~l~~~g~~~g~~i~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~~  126 (134)
T 3fcd_A           79 SLHTKLSPALENLPADQVEPLKNMPYG-QREFQVRMPDGDWLNFTAPLA  126 (134)
T ss_dssp             HHHHHHHHHHTTSCGGGEEEEEECTTS-EEEEEEECTTSCEEEEEEECC
T ss_pred             HHHHHHHhcCCccCCccccCCcccCCC-cEEEEEECCCCCEEEEEEccc
Confidence            9999999665    4567777777774 388999999999999999765

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.73  E-value=7e-17  Score=117.29  Aligned_cols=116  Identities=17%  Similarity=0.280  Sum_probs=83.7

Q ss_pred             CCCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCC--------cceEEEEeeecCCcccccCCc
Q 024779          128 PEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPED--------KNVVLELTYNYGVTDYDKGNA  199 (262)
Q Consensus       128 ~~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~~~~~~~~~~~~  199 (262)
                      ..++.|+.|.|+|++++++||+++|||++....   +..+  .++..++..        ......+...      +..++
T Consensus        23 ~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~---~~~~--~~~~~~~~~~~l~~~~~~~~~~~l~~~------~~~~g   91 (148)
T 2r6u_A           23 TGRIVHFEIPFDDGDRARAFYRDAFGWAIAEIP---DMDY--SMVTTGPVGESGMPDEPGYINGGMMQR------GEVTT   91 (148)
T ss_dssp             CCCEEEEEEEESSHHHHHHHHHHHHCCEEEEET---TTTE--EEEECSCBCTTSSBCSSSCBCEEEEES------SSSCS
T ss_pred             CCceEEEEEEeCCHHHHHHHHHHccCcEEEECC---CCCE--EEEEeCCcceeecccCCcccccceeec------CCCCe
Confidence            358999999999999999999999999987631   1222  233322210        0111222211      01133


Q ss_pred             eeEEEEEecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          200 YAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       200 ~~~i~~~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                       .|++|.|+|+++++++|+++|+++..+|.+.++ .++.+|++||+||.|||++..+
T Consensus        92 -~~l~f~v~dld~~~~~l~~~G~~~~~~~~~~~~-~g~~~~~~DPdG~~iel~~~~~  146 (148)
T 2r6u_A           92 -PVVTVDVESIESALERIESLGGKTVTGRTPVGN-MGFAAYFTDSEGNVVGLWETAR  146 (148)
T ss_dssp             -CEEEEECSCHHHHHHHHHHTTCEEEEEEEEETT-TEEEEEEECTTSCEEEEEEECC
T ss_pred             -EEEEEEcCCHHHHHHHHHHcCCeEecCCeecCC-CEEEEEEECCCCCEEEEEecCC
Confidence             599999999999999999999999988876662 1489999999999999998753

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.73  E-value=1.6e-16  Score=115.16  Aligned_cols=119  Identities=20%  Similarity=0.262  Sum_probs=88.7

Q ss_pred             CCCCCceeEEeeecChhhhHHHH---HHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecC---Ccccc-cCC
Q 024779          126 PTPEPLCQVMLRVGDLDRSINFY---EQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYG---VTDYD-KGN  198 (262)
Q Consensus       126 ~~~~~~~~v~l~v~d~~~~~~FY---~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~-~~~  198 (262)
                      +...++.|+.|.|+|++++++||   +++|||++......  +  . .++. +    ...+.|.....   ..+.. ...
T Consensus        16 ~~~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~~--~--~-~~~~-g----~~~l~l~~~~~~~~~~~~~~~~~   85 (146)
T 3ct8_A           16 YFQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSR--G--K-SYKH-G----KTYLVFVQTEDRFQTPTFHRKRT   85 (146)
T ss_dssp             TTTTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEETT--E--E-EEEE-T----TEEEEEEECCGGGSCSCCCTTSS
T ss_pred             ccccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecCC--C--c-eEec-C----CeEEEEEEcCCCcccccccccCC
Confidence            44568999999999999999999   99999999765431  1  1 2333 2    24666665432   11111 235


Q ss_pred             ceeEEEEEec---CHHHHHHHHHHhCCeeec-CCccCCCC-cceEEEEeCCCCcEEEEEec
Q 024779          199 AYAQIAIGTD---DVYKTAEAIKLFGGKVTR-EPGPLPGI-NTKITACLDPDGWKTVFVDN  254 (262)
Q Consensus       199 ~~~~i~~~v~---dl~~~~~~l~~~g~~~~~-~~~~~~~~-~~~~~~~~DP~G~~ie~~~~  254 (262)
                      +..|++|.|+   |+++++++|+++|+++.. .|...+++ ..+.+|++||+||.|||++.
T Consensus        86 g~~hi~f~v~~~~dv~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~p  146 (146)
T 3ct8_A           86 GLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVAP  146 (146)
T ss_dssp             SCCEEEEECSCHHHHHHHHHHHHHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEECC
T ss_pred             CceEEEEECCCHHHHHHHHHHHHHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEeC
Confidence            7799999998   999999999999999987 46555443 24789999999999999863

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.73  E-value=1.2e-16  Score=113.99  Aligned_cols=120  Identities=14%  Similarity=0.058  Sum_probs=85.7

Q ss_pred             CCCCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEE
Q 024779          127 TPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIG  206 (262)
Q Consensus       127 ~~~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~  206 (262)
                      .+.+++|+.|.|+|++++++||+++|||++.....      .+..+...+    ..+.+........+ ...+..|++|.
T Consensus         6 ~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~g----~~~~l~~~~~~~~~-~~~~~~h~~~~   74 (135)
T 3rri_A            6 NPNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP------DRITLDFFG----DQLVCHLSDRWDRE-VSMYPRHFGIT   74 (135)
T ss_dssp             CTTSEEEEEEEESCHHHHHHHHTTTTCCEEEEEET------TEEEEEETT----EEEEEEECSCSCSS-CCSSSCEEEEE
T ss_pred             CCCccceEEEEcCCHHHHHHHHHHhcCCEeeccCC------CcEEEEEeC----CEEEEEEcCccccc-CCCCCCeEEEE
Confidence            35689999999999999999999999999965432      122333211    12334332211111 33456799998


Q ss_pred             ec---CHHHHHHHHHHhCCeeecCCccCC---CCcceEEEEeCCCCcEEEEEecccc
Q 024779          207 TD---DVYKTAEAIKLFGGKVTREPGPLP---GINTKITACLDPDGWKTVFVDNVDF  257 (262)
Q Consensus       207 v~---dl~~~~~~l~~~g~~~~~~~~~~~---~~~~~~~~~~DP~G~~ie~~~~~~~  257 (262)
                      +.   |+++++++|+++|+++..+|....   .+..+.+|++|||||.|||.+..+.
T Consensus        75 ~~~~~d~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~~~~  131 (135)
T 3rri_A           75 FRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYYFDD  131 (135)
T ss_dssp             CSSHHHHHHHHHHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEESSG
T ss_pred             EcChHhHHHHHHHHHHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEECCh
Confidence            74   699999999999999988776542   2234789999999999999997764

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.73  E-value=8.3e-17  Score=115.58  Aligned_cols=119  Identities=22%  Similarity=0.342  Sum_probs=82.8

Q ss_pred             ceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCH-
Q 024779            2 LHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDV-   80 (262)
Q Consensus         2 ~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~-   80 (262)
                      .||+|.|+|++++++||+++|||++..+... .+.+..+++..+...  ..+++.......+...+.++.|++|.|+|+ 
T Consensus        13 ~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~~~--~~l~l~~~~~~~~~~~~~~~~hi~~~v~d~~   89 (139)
T 1twu_A           13 IRIARPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGLPHAD--YHLEFTQYEGGSTAPVPHPDSLLVFYVPNAV   89 (139)
T ss_dssp             EEEEEECSCHHHHHHHHTTTSCCCEEEEEEE-ETTEEEEEEESSSSS--EEEEEEEETTCCCCCCCCTTCEEEEECCCHH
T ss_pred             eEEeeEeCCHHHHHHHHHhcCCcEEEEeccC-CCCeeEEEEecCCCc--eEEEEeecCCCCCCCCCCCccEEEEEeCCcc
Confidence            4788899999999999999999998765421 233445566554332  335555432222333456788999999999 


Q ss_pred             --HHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcC
Q 024779           81 --AKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        81 --~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                        ++++++|+++|+++..++.+.....+  .||.|||||.|||++..
T Consensus        90 ~l~~~~~~l~~~G~~~~~~~~~~~~~~g--~~~~DPdG~~iel~~~~  134 (139)
T 1twu_A           90 ELAAITSKLKHMGYQEVESENPYWSNGG--VTIEDPDGWRIVFMNSK  134 (139)
T ss_dssp             HHHHHHHHHHHTTCCEECCSSHHHHSSE--EEEECTTCCEEEEESSC
T ss_pred             hHHHHHHHHHHcCCcCcCCCCcccCCCC--eEEECCCCCEEEEEEcC
Confidence              99999999999998733222111122  26999999999999763

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.73  E-value=1.1e-16  Score=112.92  Aligned_cols=112  Identities=21%  Similarity=0.283  Sum_probs=84.2

Q ss_pred             eeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecCHH
Q 024779          132 CQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVY  211 (262)
Q Consensus       132 ~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~dl~  211 (262)
                      .++.|.|+|++++++||++ |||++...    +.  .+..+..+    ...+.|......   ...++..|++|.|+|++
T Consensus         5 ~~~~l~v~D~~~a~~FY~~-LG~~~~~~----~~--~~~~~~~~----~~~l~l~~~~~~---~~~~~~~~~~~~v~dv~   70 (126)
T 1ecs_A            5 ATPNLPSRDFDSTAAFYER-LGFGIVFR----DA--GWMILQRG----DLMLEFFAHPGL---DPLASWFSCCLRLDDLA   70 (126)
T ss_dssp             EEEEEEESCHHHHHHHHHT-TTCEEEEE----CS--SEEEEEET----TEEEEEEECTTC---CGGGCCCEEEEEESCHH
T ss_pred             EEEEEEeCCHHHHHHHHHH-CCCEEEec----CC--CEEEEEeC----CEEEEEEeCCCC---CCCCcceEEEEEECCHH
Confidence            5789999999999999998 99999765    11  22334432    345666543221   12356789999999999


Q ss_pred             HHHHHHHHhCCee-------ecCCccCCCCcceEEEEeCCCCcEEEEEeccccc
Q 024779          212 KTAEAIKLFGGKV-------TREPGPLPGINTKITACLDPDGWKTVFVDNVDFL  258 (262)
Q Consensus       212 ~~~~~l~~~g~~~-------~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~~  258 (262)
                      +++++|+++|+++       ..+|.+.++|. +.++++||+||.|||++.....
T Consensus        71 ~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~-~~~~~~DPdG~~iel~~~~~~~  123 (126)
T 1ecs_A           71 EFYRQCKSVGIQETSSGYPRIHAPELQGWGG-TMAALVDPDGTLLRLIQNELLA  123 (126)
T ss_dssp             HHHHHHHHTTCCBCSSSSSEEEEEEECTTSS-EEEEEECTTSCEEEEEECCC--
T ss_pred             HHHHHHHHCCCccccccCccccCCcccCccc-EEEEEECCCCCEEEEecchhhc
Confidence            9999999999994       66777677653 8899999999999999987654

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.73  E-value=1.8e-16  Score=114.13  Aligned_cols=111  Identities=23%  Similarity=0.407  Sum_probs=83.8

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCC-CCCCCCCCCceeEEEEeC-
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG-VDKYDIGTGFGHFGIAVD-   78 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~i~~~v~-   78 (262)
                      |+||.|.|+|++++++||+++|||++..+..      ...++..++  .  .+.+..... ........+..|++|.|+ 
T Consensus         5 i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~--~--~l~l~~~~~~~~~~~~~~~~~hi~~~v~~   74 (141)
T 1npb_A            5 LNHLTLAVSDLQKSVTFWHELLGLTLHARWN------TGAYLTCGD--L--WVCLSYDEARQYVPPQESDYTHYAFTVAE   74 (141)
T ss_dssp             EEEEEEEESCHHHHHHHHHTTSCCEEEEEET------TEEEEEETT--E--EEEEEECTTCCCCCGGGSCSCEEEEECCH
T ss_pred             EEEEEEEeCCHHHHHHHHHhccCCEEEeecC------CcEEEEECC--E--EEEEEECCCCCCCCCCCCCceEEEEEeCH
Confidence            5799999999999999999999999987642      134555543  2  344443321 111223457889999997 


Q ss_pred             -CHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcC
Q 024779           79 -DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        79 -d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                       |+++++++|+++|+++..++..    +.+.++|.||+||.|||++..
T Consensus        75 ~d~~~~~~~l~~~G~~~~~~~~~----~~~~~~~~DPdG~~iel~~~~  118 (141)
T 1npb_A           75 EDFEPLSQRLEQAGVTIWKQNKS----EGASFYFLDPDGHKLELHVGS  118 (141)
T ss_dssp             HHHHHHHHHHHHTTCCEEECCCS----SSEEEEEECTTCCEEEEEECC
T ss_pred             HHHHHHHHHHHHCCCeEeccCCC----ceeEEEEECCCCCEEEEEECc
Confidence             9999999999999998876532    457889999999999999864

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.73  E-value=4.7e-17  Score=117.19  Aligned_cols=117  Identities=16%  Similarity=0.163  Sum_probs=84.3

Q ss_pred             CceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeee-----cC-Ccc-cccCCceeE
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYN-----YG-VTD-YDKGNAYAQ  202 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~-~~~-~~~~~~~~~  202 (262)
                      ++.|+.|.|+|++++++||+++|||++......+  .+  ..+..+    ...+.+...     .. ..+ ...+.+ .|
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~--~~--~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~-~~   78 (141)
T 2rbb_A            8 DLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRSP--IF--RGLDTG----KSCIGFNAHEAYELMQLAQFSETSGIK-FL   78 (141)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEECGGGCBT--TE--EEEECS----SSEEEEECTHHHHHTTCGGGCCCBSCC-EE
T ss_pred             cccEEEEEECCHHHHHHHHHHhcCCeeecccCCC--ce--EEeecC----CEEEEEcCccccccccccccCCCCCCe-EE
Confidence            7899999999999999999999999986443211  12  223321    233444221     00 011 112334 59


Q ss_pred             EEEEec---CHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          203 IAIGTD---DVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       203 i~~~v~---dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                      ++|.|+   |+++++++|+++|+++..+|...+++ .+.+|++||+||.|||++...
T Consensus        79 ~~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~~  134 (141)
T 2rbb_A           79 LNFDVDTKEAVDKLVPVAIAAGATLIKAPYETYYH-WYQAVLLDPERNVFRINNVLE  134 (141)
T ss_dssp             EEEECSCHHHHHHHHHHHHHTTCEEEEEEEECTTS-EEEEEEECTTSCEEEEEEEC-
T ss_pred             EEEEcCCHHHHHHHHHHHHHcCCeEecCccccCCc-cEEEEEECCCCCEEEEEEccc
Confidence            999999   59999999999999999888777765 488999999999999998654

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.72  E-value=1e-16  Score=114.58  Aligned_cols=111  Identities=24%  Similarity=0.287  Sum_probs=84.9

Q ss_pred             CceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEec-
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTD-  208 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~-  208 (262)
                      +++|+.|.|+|++++++||+++|||++.....  +.    .++..+    ...+.+......  ....++..|++|.|+ 
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~~----~~~~~~----~~~l~l~~~~~~--~~~~~~~~h~~~~v~~   71 (135)
T 1nki_A            4 GLNHLTLAVADLPASIAFYRDLLGFRLEARWD--QG----AYLELG----SLWLCLSREPQY--GGPAADYTHYAFGIAA   71 (135)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--TE----EEEEET----TEEEEEEECTTC--CCCCSSSCEEEEEECH
T ss_pred             eEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCC--Cc----eEEecC----CEEEEEEeCCCC--CCCCCCcceEEEEccH
Confidence            58899999999999999999999999976532  11    233322    244666543211  223457889999997 


Q ss_pred             -CHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          209 -DVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       209 -dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                       |+++++++|+++|+++..++..  +  ++.+|++||+||.|||++...
T Consensus        72 ~d~~~~~~~l~~~G~~~~~~~~~--~--~~~~~~~DPdG~~iel~~~~~  116 (135)
T 1nki_A           72 ADFARFAAQLRAHGVREWKQNRS--E--GDSFYFLDPDGHRLEAHVGDL  116 (135)
T ss_dssp             HHHHHHHHHHHHTTCCEEECCCS--S--SCEEEEECTTCCEEEEESCCH
T ss_pred             HHHHHHHHHHHHCCCceecCCCC--C--eEEEEEECCCCCEEEEEECCc
Confidence             9999999999999999877643  3  478999999999999998654

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.72  E-value=2.3e-16  Score=114.33  Aligned_cols=114  Identities=22%  Similarity=0.405  Sum_probs=83.7

Q ss_pred             CceEEEEeCCHHHHHHHH---HhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCC---CCCCC-CCCCceeE
Q 024779            1 MLHVVYRVGDLDRTIKFY---TECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG---VDKYD-IGTGFGHF   73 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY---~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~-~~~~~~~i   73 (262)
                      |+||.|.|+|++++++||   +++|||++..+..  .   ...|+. +.    ..+.+.....   ..+.. ...++.|+
T Consensus        21 i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~--~---~~~~~~-g~----~~l~l~~~~~~~~~~~~~~~~~g~~hi   90 (146)
T 3ct8_A           21 LHHVEINVDHLEESIAFWDWLLGELGYEDYQSWS--R---GKSYKH-GK----TYLVFVQTEDRFQTPTFHRKRTGLNHL   90 (146)
T ss_dssp             CCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEET--T---EEEEEE-TT----EEEEEEECCGGGSCSCCCTTSSSCCEE
T ss_pred             eeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecC--C---CceEec-CC----eEEEEEEcCCCcccccccccCCCceEE
Confidence            689999999999999999   9999999987643  1   123544 32    2455554321   11111 23577899


Q ss_pred             EEEeC---CHHHHHHHHHHcCCeeec-CCcccCCC-CeEEEEEECCCCCEEEEEEc
Q 024779           74 GIAVD---DVAKTVELIKAKGGKVTR-EPGPVKGG-NTVIAFIEDPDGYKFELLER  124 (262)
Q Consensus        74 ~~~v~---d~~~~~~~l~~~G~~~~~-~~~~~~~~-~~~~~~~~DP~G~~iel~~~  124 (262)
                      +|.|+   |+++++++|+++|+++.. +|.....+ +.+.++|.|||||.|||+++
T Consensus        91 ~f~v~~~~dv~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~p  146 (146)
T 3ct8_A           91 AFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVAP  146 (146)
T ss_dssp             EEECSCHHHHHHHHHHHHHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEECC
T ss_pred             EEECCCHHHHHHHHHHHHHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEeC
Confidence            99999   899999999999999876 35443332 45788999999999999853

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.72  E-value=3.4e-17  Score=118.82  Aligned_cols=116  Identities=16%  Similarity=0.189  Sum_probs=83.9

Q ss_pred             CCCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCC---cccccCCceeEEE
Q 024779          128 PEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGV---TDYDKGNAYAQIA  204 (262)
Q Consensus       128 ~~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~i~  204 (262)
                      ..+++||.|.|+|++++++||+++|||++.....    ..  ..+..+    ...+.|......   ......++..|++
T Consensus        25 i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~----~~--~~l~~g----~~~l~l~~~~~~~~~~~~~~~~g~~~~~   94 (147)
T 3zw5_A           25 IRRLDHIVMTVKSIKDTTMFYSKILGMEVMTFKE----DR--KALCFG----DQKFNLHEVGKEFEPKAAHPVPGSLDIC   94 (147)
T ss_dssp             CEEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT----TE--EEEEET----TEEEEEEETTSCCSSCCSSCCTTCCEEE
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhcCCEEEecCC----Cc--eEEEEC----CcEEEEEEcCCCcCcccCCCCCCCceEE
Confidence            3589999999999999999999999999985432    11  223322    234445432211   1122345778899


Q ss_pred             EEec-CHHHHHHHHHHhCCeeecCCccCCC--CcceEEEEeCCCCcEEEEEe
Q 024779          205 IGTD-DVYKTAEAIKLFGGKVTREPGPLPG--INTKITACLDPDGWKTVFVD  253 (262)
Q Consensus       205 ~~v~-dl~~~~~~l~~~g~~~~~~~~~~~~--~~~~~~~~~DP~G~~ie~~~  253 (262)
                      |.+. |+++++++|+++|+++..+|....+  +..+.+|++|||||.|||.+
T Consensus        95 ~~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~  146 (147)
T 3zw5_A           95 LITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSN  146 (147)
T ss_dssp             EECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEE
T ss_pred             EEeccCHHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEec
Confidence            9886 9999999999999999876654332  22367899999999999986

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.72  E-value=5.6e-17  Score=113.20  Aligned_cols=109  Identities=20%  Similarity=0.216  Sum_probs=81.3

Q ss_pred             eEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCHHH
Q 024779            3 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAK   82 (262)
Q Consensus         3 hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~~~   82 (262)
                      |+.|.|+|++++.+||+++|||++....    +  ...++..+.. ....+.+.....     ...+..|++|.|+|+++
T Consensus        10 ~v~l~v~d~~~a~~FY~~~lG~~~~~~~----~--~~~~~~~~~~-~~~~l~l~~~~~-----~~~~~~~~~~~v~d~~~   77 (119)
T 2pjs_A           10 VANIATPEPARAQAFYGDILGMPVAMDH----G--WIVTHASPLE-AHAQVSFAREGG-----SGTDVPDLSIEVDNFDE   77 (119)
T ss_dssp             EEEEECSCGGGGHHHHTTTTCCCEEEEC----S--SEEEEEEEEE-EEEEEEEESSSB-----TTBCCCSEEEEESCHHH
T ss_pred             EEEEEcCCHHHHHHHHHHhcCCEEEecC----C--EEEEEecCCC-CcEEEEEEcCCC-----CCCceeEEEEEECCHHH
Confidence            8999999999999999999999987642    1  2333433321 123344443211     12345689999999999


Q ss_pred             HHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEc
Q 024779           83 TVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  124 (262)
Q Consensus        83 ~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  124 (262)
                      ++++|+++|+++..++...++ +.+.+++.||+||.|||+++
T Consensus        78 ~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           78 VHARILKAGLPIEYGPVTEAW-GVQRLFLRDPFGKLINILSH  118 (119)
T ss_dssp             HHHHHHHTTCCCSEEEEECTT-SCEEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHCCCccccCCccCCC-ccEEEEEECCCCCEEEEEec
Confidence            999999999998777666654 46889999999999999975

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.72  E-value=1.1e-16  Score=116.52  Aligned_cols=115  Identities=20%  Similarity=0.267  Sum_probs=86.0

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCC-----CCCCCCCCCceeEEE
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG-----VDKYDIGTGFGHFGI   75 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~~i~~   75 (262)
                      |+||.|.|+|++++++||+++|||++.....      ..+++..+.  .  .+.+.....     ..+...+.+..|++|
T Consensus         6 i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~--~--~l~l~~~~~~~~~~~~~~~~~~~~~~l~f   75 (150)
T 3bqx_A            6 VAVITLGIGDLEASARFYGEGFGWAPVFRNP------EIIFYQMNG--F--VLATWLVQNLQEDVGVAVTSRPGSMALAH   75 (150)
T ss_dssp             CCEEEEEESCHHHHHHHHHHTSCCCCSEECS------SEEEEECSS--S--EEEEEEHHHHHHHHSSCCCSSCCSCEEEE
T ss_pred             eEEEEEEcCCHHHHHHHHHHhcCCEeecCCC------CEEEEEcCC--E--EEEEEeccccccccCCCCCCCCCeEEEEE
Confidence            5899999999999999999999999876531      245555532  2  345544211     001112456779999


Q ss_pred             Ee---CCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCC
Q 024779           76 AV---DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  126 (262)
Q Consensus        76 ~v---~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~  126 (262)
                      .|   +|+++++++|+++|+++..+|...++ +.+.++|.||+||.|||++...
T Consensus        76 ~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~  128 (150)
T 3bqx_A           76 NVRAETEVAPLMERLVAAGGQLLRPADAPPH-GGLRGYVADPDGHIWEIAFNPV  128 (150)
T ss_dssp             ECSSGGGHHHHHHHHHHTTCEEEEEEECCTT-SSEEEEEECTTCCEEEEEECTT
T ss_pred             EeCCHHHHHHHHHHHHHCCCEEecCCcccCC-CCEEEEEECCCCCEEEEEeCCC
Confidence            99   89999999999999999877766654 4588999999999999998643

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.72  E-value=6.7e-17  Score=111.74  Aligned_cols=107  Identities=19%  Similarity=0.188  Sum_probs=80.9

Q ss_pred             CceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEe--
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGT--  207 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v--  207 (262)
                      +++|+.|.|+|++++++||+++|||++.....   .  ...++..+   .+..+.+.....    ...++..|++|.|  
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~---~--~~~~~~~~---~~~~l~l~~~~~----~~~~~~~~~~~~v~~   70 (113)
T 1xqa_A            3 GIKHLNLTVADVVAAREFLEKYFGLTCSGTRG---N--AFAVMRDN---DGFILTLMKGKE----VQYPKTFHVGFPQES   70 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEET---T--TEEEEECT---TCCEEEEEECSS----CCCCTTCCEEEECSS
T ss_pred             eeEEEEEEeCCHHHHHHHHHHhCCCEEeccCC---C--cEEEEEcC---CCcEEEEEeCCC----CCCCceeEEEEEcCC
Confidence            68999999999999999999999999876421   1  22444432   234566654321    1135788999999  


Q ss_pred             -cCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEE
Q 024779          208 -DDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFV  252 (262)
Q Consensus       208 -~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~  252 (262)
                       +|+++++++|+++|+++.. |... +  ++.+|++||+||.|||+
T Consensus        71 ~~d~~~~~~~l~~~G~~~~~-p~~~-~--~~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           71 EEQVDKINQRLKEDGFLVEP-PKHA-H--AYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             HHHHHHHHHHHHHTTCCCCC-CEEC----CEEEEEEETTTEEEEEE
T ss_pred             HHHHHHHHHHHHHCCCEEec-CcCC-C--cEEEEEECCCCcEEEEe
Confidence             8999999999999999864 5332 3  58999999999999986

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.72  E-value=1.4e-16  Score=114.68  Aligned_cols=114  Identities=20%  Similarity=0.298  Sum_probs=86.0

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcc-cccCCceeEEEEEe
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD-YDKGNAYAQIAIGT  207 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~i~~~v  207 (262)
                      .+++|+.|.|+|++++++||+++|||++.....  +  .  .++..+    ...+.|.......+ .....+..|++|.|
T Consensus         3 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~--~--~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~hi~~~v   72 (141)
T 1npb_A            3 QSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN--T--G--AYLTCG----DLWVCLSYDEARQYVPPQESDYTHYAFTV   72 (141)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET--T--E--EEEEET----TEEEEEEECTTCCCCCGGGSCSCEEEEEC
T ss_pred             ceEEEEEEEeCCHHHHHHHHHhccCCEEEeecC--C--c--EEEEEC----CEEEEEEECCCCCCCCCCCCCceEEEEEe
Confidence            368999999999999999999999999976542  1  1  233322    23466655332111 22345789999999


Q ss_pred             c--CHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          208 D--DVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       208 ~--dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                      +  |+++++++|+++|+++..+|.  .+  ++.+|++||+||.|||++...
T Consensus        73 ~~~d~~~~~~~l~~~G~~~~~~~~--~~--~~~~~~~DPdG~~iel~~~~~  119 (141)
T 1npb_A           73 AEEDFEPLSQRLEQAGVTIWKQNK--SE--GASFYFLDPDGHKLELHVGSL  119 (141)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEECCC--SS--SEEEEEECTTCCEEEEEECCH
T ss_pred             CHHHHHHHHHHHHHCCCeEeccCC--Cc--eeEEEEECCCCCEEEEEECch
Confidence            6  999999999999999987663  23  488999999999999998754

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.72  E-value=1.4e-16  Score=115.48  Aligned_cols=113  Identities=19%  Similarity=0.305  Sum_probs=81.3

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCC---CCCCCCCCCceeEEEEe
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG---VDKYDIGTGFGHFGIAV   77 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~i~~~v   77 (262)
                      |+||.|.|+|++++++||+++|||++....+      ...++..++.    .+.+.....   +.......|..|++|.+
T Consensus        28 i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~------~~~~l~~g~~----~l~l~~~~~~~~~~~~~~~~g~~~~~~~~   97 (147)
T 3zw5_A           28 LDHIVMTVKSIKDTTMFYSKILGMEVMTFKE------DRKALCFGDQ----KFNLHEVGKEFEPKAAHPVPGSLDICLIT   97 (147)
T ss_dssp             EEEEEEEESCHHHHHHHHHHHHCCEEEEETT------TEEEEEETTE----EEEEEETTSCCSSCCSSCCTTCCEEEEEC
T ss_pred             ccEEEEEeCCHHHHHHHHHHhcCCEEEecCC------CceEEEECCc----EEEEEEcCCCcCcccCCCCCCCceEEEEe
Confidence            5799999999999999999999999985432      2344555532    334433211   11122345778899988


Q ss_pred             C-CHHHHHHHHHHcCCeeecCCcccC--CCCeEEEEEECCCCCEEEEEE
Q 024779           78 D-DVAKTVELIKAKGGKVTREPGPVK--GGNTVIAFIEDPDGYKFELLE  123 (262)
Q Consensus        78 ~-d~~~~~~~l~~~G~~~~~~~~~~~--~~~~~~~~~~DP~G~~iel~~  123 (262)
                      . |+++++++|+++|+++..+|....  .|..+.++|.|||||.|||.+
T Consensus        98 ~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~  146 (147)
T 3zw5_A           98 EVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSN  146 (147)
T ss_dssp             SSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEE
T ss_pred             ccCHHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEec
Confidence            6 999999999999999875554322  223467899999999999986

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.72  E-value=6.1e-17  Score=113.65  Aligned_cols=107  Identities=17%  Similarity=0.118  Sum_probs=82.4

Q ss_pred             eeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecCHH
Q 024779          132 CQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVY  211 (262)
Q Consensus       132 ~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~dl~  211 (262)
                      .++.|.|+|++++++||+++|||++....    ..  +.++..+    ...+.|.....   . ..++..|++|.|+|++
T Consensus         7 ~~~~l~v~D~~~a~~FY~~~LG~~~~~~~----~~--~~~~~~~----~~~l~l~~~~~---~-~~~~~~~~~~~v~dvd   72 (122)
T 1qto_A            7 AVPVLTAVDVPANVSFWVDTLGFEKDFGD----RD--FAGVRRG----DIRLHISRTEH---Q-IVADNTSAWIEVTDPD   72 (122)
T ss_dssp             CCCEEEESSHHHHHHHHHHTTCCEEEEEC----SS--EEEEEET----TEEEEEEECSC---H-HHHTTCEEEEEESCHH
T ss_pred             eeEEEEcCCHHHHHHHHHhccCcEEeeCC----CC--EEEEEEC----CEEEEEEcCCC---C-CCCCceEEEEEECCHH
Confidence            46899999999999999999999997641    12  2334422    34566654221   1 1123479999999999


Q ss_pred             HHHHHHHHh------CC--eeecCCccCCCCcceEEEEeCCCCcEEEEEec
Q 024779          212 KTAEAIKLF------GG--KVTREPGPLPGINTKITACLDPDGWKTVFVDN  254 (262)
Q Consensus       212 ~~~~~l~~~------g~--~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  254 (262)
                      +++++|+++      |+  ++..+|...++|  +.++++||+||.|+|.++
T Consensus        73 ~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g--~~~~~~DPdG~~iel~~~  121 (122)
T 1qto_A           73 ALHEEWARAVSTDYADTSGPAMTPVGESPAG--REFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHHHTTTSCSCTTCTTSCEECCCEEETTE--EEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHhhccccccCccccccCCCcCCCCC--cEEEEECCCCCEEEEecC
Confidence            999999999      99  888888777774  789999999999999985

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.72  E-value=4.4e-17  Score=117.73  Aligned_cols=114  Identities=21%  Similarity=0.229  Sum_probs=81.8

Q ss_pred             eEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCHHH
Q 024779            3 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAK   82 (262)
Q Consensus         3 hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~~~   82 (262)
                      ++.|.|+|++++++||+++|||++..+...+........  .+.      +.+......  .....+..|++|.|+|+++
T Consensus         9 ~i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~--~~~------~~l~~~~~~--~~~~~~~~hl~f~V~d~d~   78 (144)
T 3r6a_A            9 LSRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQ--IST------ILLIAGSEE--ALKPFRNTQATFLVDSLDK   78 (144)
T ss_dssp             EEEEEESCHHHHHHHHHHHTTCCCCEECCCSCSSCEEEE--ETT------EEEEESCHH--HHGGGGGCCEEEEESCHHH
T ss_pred             EEEEEECCHHHHHHHHHHhcCCEEEEEeccCCccEEEEE--ecc------EEEecCCcc--cCCCCcceEEEEEeCCHHH
Confidence            478999999999999999999998776543333333222  221      233322111  1111245789999999999


Q ss_pred             HHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCCCC
Q 024779           83 TVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTP  128 (262)
Q Consensus        83 ~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~~~  128 (262)
                      ++++|+++|+++..+|...++|  +.++|.||+||.|||++..+.+
T Consensus        79 ~~~~l~~~G~~v~~~p~~~~~G--~~~~~~DPdG~~iel~~~~~~~  122 (144)
T 3r6a_A           79 FKTFLEENGAEIIRGPSKVPTG--RNMTVRHSDGSVIEYVEHSKIE  122 (144)
T ss_dssp             HHHHHHHTTCEEEEEEEEETTE--EEEEEECTTSCEEEEEEECC--
T ss_pred             HHHHHHHcCCEEecCCccCCCc--eEEEEECCCCCEEEEEEcCCcc
Confidence            9999999999998777766653  7789999999999999987543

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.71  E-value=2.4e-16  Score=112.48  Aligned_cols=115  Identities=12%  Similarity=0.103  Sum_probs=80.6

Q ss_pred             eEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCHHH
Q 024779            3 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAK   82 (262)
Q Consensus         3 hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~~~   82 (262)
                      +..|.|+|++++++||+++|||++..+..      ..+++..+.    ..+.+...........+.+..|++|.|+|+++
T Consensus        10 ~~~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~l~~~~----~~l~l~~~~~~~~~~~~~~~~~l~~~v~dv~~   79 (134)
T 3fcd_A           10 TPFLHIPDMQEALTLFCDTLGFELKYRHS------NYAYLELSG----CGLRLLEEPARKIIPDGIARVAICIDVSDIDS   79 (134)
T ss_dssp             EEEEEESCHHHHHHHHTTTTCCEEEEEET------TEEEEEETT----EEEEEEECCCC---------EEEEEECSCHHH
T ss_pred             eeEEEECCHHHHHHHHHhccCcEEEEeCC------CeEEEEECC----EEEEEEeCCCCCcCCCCCceEEEEEEeCCHHH
Confidence            46899999999999999999999987643      245665543    24555543322211222344689999999999


Q ss_pred             HHHHHHHcC----CeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCCCC
Q 024779           83 TVELIKAKG----GKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTP  128 (262)
Q Consensus        83 ~~~~l~~~G----~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~~~  128 (262)
                      ++++|+++|    +++..++...++ +.+.++|.|||||.|||.+....+
T Consensus        80 ~~~~l~~~g~~~g~~i~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~~~  128 (134)
T 3fcd_A           80 LHTKLSPALENLPADQVEPLKNMPY-GQREFQVRMPDGDWLNFTAPLAEG  128 (134)
T ss_dssp             HHHHHHHHHTTSCGGGEEEEEECTT-SEEEEEEECTTSCEEEEEEECCTT
T ss_pred             HHHHHHhcCCccCCccccCCcccCC-CcEEEEEECCCCCEEEEEEccccc
Confidence            999999665    445556655554 568899999999999999876543

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.71  E-value=2.6e-16  Score=110.75  Aligned_cols=108  Identities=12%  Similarity=0.035  Sum_probs=81.4

Q ss_pred             ceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCHH
Q 024779            2 LHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVA   81 (262)
Q Consensus         2 ~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~~   81 (262)
                      .|+.|.|+|++++.+||+++|||++..+..      ..+++..+.  .  .+.+......    ...+..|++|.|+|++
T Consensus         7 ~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~--~--~l~l~~~~~~----~~~~~~~~~~~v~dv~   72 (124)
T 1xrk_A            7 AVPVLTARDVAEAVEFWTDRLGFSRVFVED------DFAGVVRDD--V--TLFISAVQDQ----VVPDNTQAWVWVRGLD   72 (124)
T ss_dssp             EEEEEEESCHHHHHHHHHHTTCCEEEEECS------SEEEEEETT--E--EEEEEECSCT----TTGGGCEEEEEEECHH
T ss_pred             eeEEEEcCCHHHHHHHHHHccCceEEecCC------CEEEEEECC--E--EEEEEcCCCC----CCCCceEEEEEECCHH
Confidence            589999999999999999999999987521      234444432  2  3444432211    1123468999999999


Q ss_pred             HHHHHHHHc------CC--eeecCCcccCCCCeEEEEEECCCCCEEEEEEcC
Q 024779           82 KTVELIKAK------GG--KVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        82 ~~~~~l~~~------G~--~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                      +++++|+++      |+  ++..+|...++ + +.+++.||+||.|||.+..
T Consensus        73 ~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~-g-~~~~~~DPdG~~iel~~~~  122 (124)
T 1xrk_A           73 ELYAEWSEVVSTNFRDASGPAMTEIVEQPW-G-REFALRDPAGNCVHFVAEE  122 (124)
T ss_dssp             HHHHHHTTTSBSCTTTCSSCEECCCEEETT-E-EEEEEECTTCCEEEEEEC-
T ss_pred             HHHHHHHHhcccccCCccccccCCceecCC-C-CEEEEECCCCCEEEEEEec
Confidence            999999999      99  88777776665 3 8899999999999999864

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.71  E-value=5.5e-17  Score=133.23  Aligned_cols=118  Identities=28%  Similarity=0.535  Sum_probs=94.7

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCc-----------CccceeeeeccCCCCcceEEEEeeecCCcccccC
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNP-----------EYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKG  197 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  197 (262)
                      .++.|++|.|+|++++++||+++|||++..+....           ++.+...++.+++......++|....+..+...+
T Consensus        26 ~~i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~~  105 (330)
T 3zi1_A           26 RRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGVGDYKLG  105 (330)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTTTCCEEEEEEETTCCCCCBC
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCCCccEEEEeccCCCCccccC
Confidence            47999999999999999999999999997765443           3455667777665556678888876554445556


Q ss_pred             CceeEEEEEecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          198 NAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       198 ~~~~~i~~~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                      .++.|++|.|+|+   .++++++|+++...|       ..++|++|||||.|||++...
T Consensus       106 ~g~~hiaf~V~d~---~~~l~~~G~~~~~~~-------~~~~~~~DPdG~~iel~~~~~  154 (330)
T 3zi1_A          106 NDFMGITLASSQA---VSNARKLEWPLTEVA-------EGVFETEAPGGYKFYLQNRSL  154 (330)
T ss_dssp             SSEEEEEEECHHH---HHHHHHHTCCCEEEE-------TTEEEEECTTSCEEEEESSCC
T ss_pred             CCeeEEEEECchH---HHHHHHcCCceeccC-------CceEEEECCCCCEEEEEecCC
Confidence            7999999999987   678899999998655       247899999999999999753

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.71  E-value=1.6e-16  Score=115.50  Aligned_cols=117  Identities=20%  Similarity=0.151  Sum_probs=79.4

Q ss_pred             CCCCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeec-------CCcccccCCc
Q 024779          127 TPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNY-------GVTDYDKGNA  199 (262)
Q Consensus       127 ~~~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~~~  199 (262)
                      ...++.||+|.|+|++++++||+++ |+........+.  .......     ....+.+....       .......+.+
T Consensus         6 ~~~rl~~V~L~V~Dl~~s~~FY~~l-g~~~~~~~~~~~--~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (149)
T 4gym_A            6 SQSRLTFVNLPVADVAASQAFFGTL-GFEFNPKFTDES--CACMVVS-----EQAFVMLIDRARFADFTSKPIADATATT   77 (149)
T ss_dssp             -CCCCEEEEEEESCHHHHHHHHHHT-TCEECGGGCBTT--EEEEEEE-----TTEEEEEEEHHHHGGGCSSCBCCTTTCB
T ss_pred             CCccEEEEEEEeCCHHHHHHHHHHh-CCCcceeecCCc--eeEEeec-----CcceEeeeccccccccccccCCCCCCCC
Confidence            4568999999999999999999884 554443322221  1111111     11222222210       0111223346


Q ss_pred             eeEEEEEec---CHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEe
Q 024779          200 YAQIAIGTD---DVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVD  253 (262)
Q Consensus       200 ~~~i~~~v~---dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~  253 (262)
                      ..|++|.|.   ++++++++++++|+.+..+|.++++  ++.+||+|||||+|||+.
T Consensus        78 ~~~~a~~v~~~~~vd~~~~~~~~~g~~~~~~p~~~~~--~~~~~f~DPDGn~iEi~~  132 (149)
T 4gym_A           78 EAIVCVSAIDRDDVDRFADTALGAGGTVARDPMDYGF--MYGRSFHDLDGHLWEVMW  132 (149)
T ss_dssp             SCEEEEECSSHHHHHHHHHHHHHTTCEECSCCEECSS--EEEEEEECTTCCEEEEEE
T ss_pred             eeEEEEEeccHHHHHHHHHHHHhcCceeeccccccCC--EEEEEEEcCCCCEEEEEE
Confidence            679999985   6888999999999999999988766  588999999999999985

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.71  E-value=2.4e-16  Score=108.92  Aligned_cols=106  Identities=21%  Similarity=0.316  Sum_probs=79.8

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEe---
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV---   77 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v---   77 (262)
                      |+||.|.|+|++++.+||+++|||++....+   .  ..+++..++ .  ..+.+......    ...+..|++|.|   
T Consensus         4 i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~---~--~~~~~~~~~-~--~~l~l~~~~~~----~~~~~~~~~~~v~~~   71 (113)
T 1xqa_A            4 IKHLNLTVADVVAAREFLEKYFGLTCSGTRG---N--AFAVMRDND-G--FILTLMKGKEV----QYPKTFHVGFPQESE   71 (113)
T ss_dssp             CCEEEEEESCHHHHHHHHHHHHCCEEEEEET---T--TEEEEECTT-C--CEEEEEECSSC----CCCTTCCEEEECSSH
T ss_pred             eEEEEEEeCCHHHHHHHHHHhCCCEEeccCC---C--cEEEEEcCC-C--cEEEEEeCCCC----CCCceeEEEEEcCCH
Confidence            6899999999999999999999999886532   1  245555443 2  34555543221    134678999999   


Q ss_pred             CCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEE
Q 024779           78 DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  122 (262)
Q Consensus        78 ~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~  122 (262)
                      +|+++++++|+++|+++.. |...  + .+.+++.||+||.|||+
T Consensus        72 ~d~~~~~~~l~~~G~~~~~-p~~~--~-~~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           72 EQVDKINQRLKEDGFLVEP-PKHA--H-AYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             HHHHHHHHHHHHTTCCCCC-CEEC----CEEEEEEETTTEEEEEE
T ss_pred             HHHHHHHHHHHHCCCEEec-CcCC--C-cEEEEEECCCCcEEEEe
Confidence            7899999999999999764 4332  2 58899999999999986

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.70  E-value=3e-16  Score=113.93  Aligned_cols=113  Identities=20%  Similarity=0.267  Sum_probs=81.7

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCcee--------EEEeeecCCCCCCCCCCCcee
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHF--------VIELTYNYGVDKYDIGTGFGH   72 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~~~~~~~~~~~~~~~~~   72 (262)
                      |+||.|.|+|++++++||+++|||++....   +.  ..+++..++....+        ...+....      ...++ |
T Consensus        26 i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~---~~--~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~------~~~g~-~   93 (148)
T 2r6u_A           26 IVHFEIPFDDGDRARAFYRDAFGWAIAEIP---DM--DYSMVTTGPVGESGMPDEPGYINGGMMQRG------EVTTP-V   93 (148)
T ss_dssp             EEEEEEEESSHHHHHHHHHHHHCCEEEEET---TT--TEEEEECSCBCTTSSBCSSSCBCEEEEESS------SSCSC-E
T ss_pred             eEEEEEEeCCHHHHHHHHHHccCcEEEECC---CC--CEEEEEeCCcceeecccCCcccccceeecC------CCCeE-E
Confidence            479999999999999999999999987631   11  24455554321111        11221110      11344 8


Q ss_pred             EEEEeCCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCC
Q 024779           73 FGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  126 (262)
Q Consensus        73 i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~  126 (262)
                      ++|.|+|+++++++|+++|+++..++...+. .++.++|.||+||.|||++..+
T Consensus        94 l~f~v~dld~~~~~l~~~G~~~~~~~~~~~~-~g~~~~~~DPdG~~iel~~~~~  146 (148)
T 2r6u_A           94 VTVDVESIESALERIESLGGKTVTGRTPVGN-MGFAAYFTDSEGNVVGLWETAR  146 (148)
T ss_dssp             EEEECSCHHHHHHHHHHTTCEEEEEEEEETT-TEEEEEEECTTSCEEEEEEECC
T ss_pred             EEEEcCCHHHHHHHHHHcCCeEecCCeecCC-CEEEEEEECCCCCEEEEEecCC
Confidence            9999999999999999999999877665552 2488999999999999998753

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.70  E-value=5.7e-17  Score=119.37  Aligned_cols=114  Identities=20%  Similarity=0.235  Sum_probs=83.8

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCC--------CCCCCCCCCcee
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG--------VDKYDIGTGFGH   72 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--------~~~~~~~~~~~~   72 (262)
                      |+||+|.|+|++++++||+++|||++..+...     ...++..+.  .  .+.+.....        ..+...+.|+.|
T Consensus         9 l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~-----~~~~~~~g~--~--~~~l~~~~~~~~~~~~~~~~~~~~~g~~h   79 (160)
T 3r4q_A            9 IMETALYADDLDAAEAFYRDVFGLEMVLKLPG-----QLVFFKCGR--Q--MLLLFDPQESSRADANNPIPRHGAVGQGH   79 (160)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHSCCEEEEEETT-----TEEEEEETT--E--EEEEECHHHHTCCCTTCCSCCCEEEEECE
T ss_pred             ccEEEEEeCCHHHHHHHHHHhcCCEEEEecCC-----cEEEEeCCC--E--EEEEEecCCccCccccCCCCcCCCcceeE
Confidence            57999999999999999999999999876531     245555443  2  233332111        111122346789


Q ss_pred             EEEEe---CCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcC
Q 024779           73 FGIAV---DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        73 i~~~v---~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                      ++|.|   +|+++++++|+++|+++..++. .. ++.+.++|.|||||.|||+++.
T Consensus        80 i~f~V~~~~dld~~~~~l~~~G~~~~~~~~-~~-~g~~~~~~~DPdG~~iel~~~~  133 (160)
T 3r4q_A           80 FCFYADDKAEVDEWKTRFEALEIPVEHYHR-WP-NGSYSVYIRDPAGNSVEVGEGK  133 (160)
T ss_dssp             EEEEESSHHHHHHHHHHHHTTTCCCCEEEE-CT-TSCEEEEEECTTCCEEEEEEGG
T ss_pred             EEEEeCCHHHHHHHHHHHHHCCCEEecccc-cc-CCcEEEEEECCCCCEEEEEeCC
Confidence            99999   8999999999999999875432 22 3578899999999999999875

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.70  E-value=7.8e-16  Score=108.58  Aligned_cols=110  Identities=22%  Similarity=0.264  Sum_probs=81.5

Q ss_pred             ceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCHH
Q 024779            2 LHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVA   81 (262)
Q Consensus         2 ~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~~   81 (262)
                      .|+.|.|+|++++++||++ |||++..+..      ..+++..++  .  .+.+......   ....+..|++|.|+|++
T Consensus         5 ~~~~l~v~D~~~a~~FY~~-LG~~~~~~~~------~~~~~~~~~--~--~l~l~~~~~~---~~~~~~~~~~~~v~dv~   70 (126)
T 1ecs_A            5 ATPNLPSRDFDSTAAFYER-LGFGIVFRDA------GWMILQRGD--L--MLEFFAHPGL---DPLASWFSCCLRLDDLA   70 (126)
T ss_dssp             EEEEEEESCHHHHHHHHHT-TTCEEEEECS------SEEEEEETT--E--EEEEEECTTC---CGGGCCCEEEEEESCHH
T ss_pred             EEEEEEeCCHHHHHHHHHH-CCCEEEecCC------CEEEEEeCC--E--EEEEEeCCCC---CCCCcceEEEEEECCHH
Confidence            3789999999999999998 9999986521      234455442  2  3455432221   11245678999999999


Q ss_pred             HHHHHHHHcCCee-------ecCCcccCCCCeEEEEEECCCCCEEEEEEcCC
Q 024779           82 KTVELIKAKGGKV-------TREPGPVKGGNTVIAFIEDPDGYKFELLERGP  126 (262)
Q Consensus        82 ~~~~~l~~~G~~~-------~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~  126 (262)
                      +++++|+++|+++       ..+|...++ +.+.+++.||+||.|||++...
T Consensus        71 ~~~~~l~~~G~~~~~~~~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~  121 (126)
T 1ecs_A           71 EFYRQCKSVGIQETSSGYPRIHAPELQGW-GGTMAALVDPDGTLLRLIQNEL  121 (126)
T ss_dssp             HHHHHHHHTTCCBCSSSSSEEEEEEECTT-SSEEEEEECTTSCEEEEEECCC
T ss_pred             HHHHHHHHCCCccccccCccccCCcccCc-ccEEEEEECCCCCEEEEecchh
Confidence            9999999999984       556655554 4578899999999999998754

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.69  E-value=4.4e-17  Score=117.28  Aligned_cols=115  Identities=14%  Similarity=0.171  Sum_probs=83.4

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEE-----eee---cCCcccccCCce
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLEL-----TYN---YGVTDYDKGNAY  200 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----~~~---~~~~~~~~~~~~  200 (262)
                      -++.|+.|.|+|++++++||+++|||++.....  +  +  ..+..     +..+..     ...   ....+...+.+.
T Consensus         7 ~~l~~v~l~v~D~~~a~~FY~~~LG~~~~~~~~--~--~--~~~~~-----g~~l~~~~~~~~~~~~~~~~~~~~~~~~~   75 (141)
T 2qnt_A            7 MRFVNPIPFVRDINRSKSFYRDRLGLKILEDFG--S--F--VLFET-----GFAIHEGRSLEETIWRTSSDAQEAYGRRN   75 (141)
T ss_dssp             CCCCCCCCEESCHHHHHHHHHHTTCCCEEEECS--S--E--EEETT-----SCEEEEHHHHHHHHHSCCC--CCCSCCSS
T ss_pred             cccceEEEEECCHHHHHHHHHHhcCCEEEEEcC--C--c--EEEec-----cceeccCchhhhhccccCCccccccCCCc
Confidence            468899999999999999999999999876431  1  1  22221     122221     010   011112334578


Q ss_pred             eEEEEEecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          201 AQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       201 ~~i~~~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                      .|++|.|+|+++++++|++ |+++..+|.+.++| .+.+|++||+||.|||++..+
T Consensus        76 ~~~~~~v~dv~~~~~~l~~-G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~~  129 (141)
T 2qnt_A           76 MLLYFEHADVDAAFQDIAP-HVELIHPLERQAWG-QRVFRFYDPDGHAIEVGESLS  129 (141)
T ss_dssp             CEEEEEESCHHHHHC-CGG-GSCEEEEEEECTTS-CEEEEEECTTCCEEEEEECC-
T ss_pred             eEEEEEeCcHHHHHHHHHc-CCccccCCccCCCC-CEEEEEECCCCCEEEEEecch
Confidence            9999999999999999999 99998888777765 388999999999999999754

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.69  E-value=1.3e-16  Score=114.38  Aligned_cols=116  Identities=16%  Similarity=0.137  Sum_probs=84.7

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecC------CCCCCCCCCCceeEE
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY------GVDKYDIGTGFGHFG   74 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~~~~~~~~~~i~   74 (262)
                      |+|+.|.|+|++++++||++ |||++..+..  ..  ..+.+..++ ..  .+.+....      +......+.+..|++
T Consensus         5 l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~--~~--~~~~~~~~~-~~--~l~l~~~~~~~~~~~~~~~~~~~~~~~l~   76 (138)
T 2a4x_A            5 ISLFAVVVEDMAKSLEFYRK-LGVEIPAEAD--SA--PHTEAVLDG-GI--RLAWDTVETVRSYDPEWQAPTGGHRFAIA   76 (138)
T ss_dssp             EEEEEEEESCHHHHHHHHHT-TTCCCCGGGG--GC--SEEEEECTT-SC--EEEEEEHHHHHHHCTTCCCCBSSCSEEEE
T ss_pred             eeEEEEEECCHHHHHHHHHH-cCCcEEecCC--CC--ceEEEEcCC-Ce--EEEEecCccchhhCcccCCCCCCCeEEEE
Confidence            57999999999999999998 9998865421  11  233343322 22  34444321      111112345778999


Q ss_pred             EEeC---CHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcC
Q 024779           75 IAVD---DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        75 ~~v~---d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                      |.|+   |+++++++|+++|+++..+|....+ +.+.++|.||+||.|||++..
T Consensus        77 f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~  129 (138)
T 2a4x_A           77 FEFPDTASVDKKYAELVDAGYEGHLKPWNAVW-GQRYAIVKDPDGNVVDLFAPL  129 (138)
T ss_dssp             EECSSHHHHHHHHHHHHHTTCCEEEEEEEETT-TEEEEEEECTTCCEEEEEEEC
T ss_pred             EEeCCHHHHHHHHHHHHHCCCceeeCCcccCC-CcEEEEEECCCCCEEEEEeCC
Confidence            9999   9999999999999999877766665 467899999999999999876

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.68  E-value=1.9e-16  Score=113.95  Aligned_cols=116  Identities=20%  Similarity=0.188  Sum_probs=81.2

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeec-----CCC--CCCCCCCCceeE
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN-----YGV--DKYDIGTGFGHF   73 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~--~~~~~~~~~~~i   73 (262)
                      |+||.|.|+|++++++||+++|||++..+..  ...  ..++..+.  .  .+.+...     ...  .....+.+. |+
T Consensus         9 i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~~~--~~~~~~~~--~--~l~l~~~~~~~~~~~~~~~~~~~~~~-~~   79 (141)
T 2rbb_A            9 LSYVNIFTRDIVAMSAFYQQVFGFQEIESIR--SPI--FRGLDTGK--S--CIGFNAHEAYELMQLAQFSETSGIKF-LL   79 (141)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHCCEECGGGC--BTT--EEEEECSS--S--EEEEECTHHHHHTTCGGGCCCBSCCE-EE
T ss_pred             ccEEEEEECCHHHHHHHHHHhcCCeeecccC--CCc--eEEeecCC--E--EEEEcCccccccccccccCCCCCCeE-EE
Confidence            4799999999999999999999999864321  111  23333332  2  2333211     010  111123454 89


Q ss_pred             EEEeC---CHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCC
Q 024779           74 GIAVD---DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  126 (262)
Q Consensus        74 ~~~v~---d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~  126 (262)
                      +|.|+   |+++++++|+++|+++..+|....+ +.+.++|.||+||.|||++...
T Consensus        80 ~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~  134 (141)
T 2rbb_A           80 NFDVDTKEAVDKLVPVAIAAGATLIKAPYETYY-HWYQAVLLDPERNVFRINNVLE  134 (141)
T ss_dssp             EEECSCHHHHHHHHHHHHHTTCEEEEEEEECTT-SEEEEEEECTTSCEEEEEEEC-
T ss_pred             EEEcCCHHHHHHHHHHHHHcCCeEecCccccCC-ccEEEEEECCCCCEEEEEEccc
Confidence            99999   5999999999999998877766554 5788999999999999998643

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.68  E-value=4.2e-16  Score=109.35  Aligned_cols=107  Identities=14%  Similarity=0.061  Sum_probs=80.1

Q ss_pred             ceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCHH
Q 024779            2 LHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVA   81 (262)
Q Consensus         2 ~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~~   81 (262)
                      .++.|.|+|++++++||+++|||++..+.   .   ..+++..+.  .  .+.+......   .. .+..|++|.|+|++
T Consensus         7 ~~~~l~v~D~~~a~~FY~~~LG~~~~~~~---~---~~~~~~~~~--~--~l~l~~~~~~---~~-~~~~~~~~~v~dvd   72 (122)
T 1qto_A            7 AVPVLTAVDVPANVSFWVDTLGFEKDFGD---R---DFAGVRRGD--I--RLHISRTEHQ---IV-ADNTSAWIEVTDPD   72 (122)
T ss_dssp             CCCEEEESSHHHHHHHHHHTTCCEEEEEC---S---SEEEEEETT--E--EEEEEECSCH---HH-HTTCEEEEEESCHH
T ss_pred             eeEEEEcCCHHHHHHHHHhccCcEEeeCC---C---CEEEEEECC--E--EEEEEcCCCC---CC-CCceEEEEEECCHH
Confidence            37899999999999999999999998652   1   234455442  2  3444432211   11 12368999999999


Q ss_pred             HHHHHHHHc------CC--eeecCCcccCCCCeEEEEEECCCCCEEEEEEc
Q 024779           82 KTVELIKAK------GG--KVTREPGPVKGGNTVIAFIEDPDGYKFELLER  124 (262)
Q Consensus        82 ~~~~~l~~~------G~--~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  124 (262)
                      +++++|+++      |+  ++..++...++ + +.+++.||+||.|+|.++
T Consensus        73 ~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~-g-~~~~~~DPdG~~iel~~~  121 (122)
T 1qto_A           73 ALHEEWARAVSTDYADTSGPAMTPVGESPA-G-REFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHHHTTTSCSCTTCTTSCEECCCEEETT-E-EEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHhhccccccCccccccCCCcCCCC-C-cEEEEECCCCCEEEEecC
Confidence            999999999      99  88777766665 3 788999999999999975

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.68  E-value=8.8e-16  Score=126.12  Aligned_cols=125  Identities=13%  Similarity=0.122  Sum_probs=89.9

Q ss_pred             CCCceeEEeeecChhhhHHHHHHhcCCeeeeeccCc-CccceeeeeccCCCCcceEEEEeeecCCccccc-CCceeEEEE
Q 024779          128 PEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNP-EYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDK-GNAYAQIAI  205 (262)
Q Consensus       128 ~~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~i~~  205 (262)
                      ..+++||++.|+|++++.+||+++|||++..+.... +......++.......+..+.+.......+... ..++.|++|
T Consensus         6 i~~i~Hv~l~v~Dl~~s~~FY~~vLGl~~v~~~~~~~~~~~~~l~~~~~~g~~g~~l~l~~~~~~~~~~~~~~~~~hiaf   85 (335)
T 3oaj_A            6 TMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGARQGVIGDGQVGVTSY   85 (335)
T ss_dssp             CCSEEEEEEEESCHHHHHHHHTTTTCCEEEEEEECSSCTTSEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEEE
T ss_pred             CCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeecCCCCCceEEEEEecCCCCCCcEEEEEECCCCCCCCCCCCceEEEEE
Confidence            468999999999999999999999999998764322 112222233322222245677665433222222 347899999


Q ss_pred             Eec--CHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          206 GTD--DVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       206 ~v~--dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                      .|+  |+++++++|+++|+++..  ....+  .+.+||+|||||.|||++..+
T Consensus        86 ~V~~~dl~~~~~rL~~~Gv~~~~--~~~~g--~~~~~f~DPdGn~iEl~~~~~  134 (335)
T 3oaj_A           86 VVPKGAMAFWEKRLEKFNVPYTK--IERFG--EQYVEFDDPHGLHLEIVEREE  134 (335)
T ss_dssp             EECTTCHHHHHHHHHHTTCCCEE--EEETT--EEEEEEECTTSCEEEEEECSC
T ss_pred             EecHHHHHHHHHHHHhCcceeee--eccCC--cEEEEEECCCCCEEEEEEeCC
Confidence            999  999999999999999874  22222  588999999999999999764

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.67  E-value=5.8e-16  Score=112.53  Aligned_cols=116  Identities=19%  Similarity=0.190  Sum_probs=76.8

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeee-----c-CC-CCCCCCCCCceeE
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTY-----N-YG-VDKYDIGTGFGHF   73 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~-~~-~~~~~~~~~~~~i   73 (262)
                      |.||+|.|+|+++|++||++ ||+.......  +..  ..++..... .  .+.+..     . .. ......+.+..|+
T Consensus        10 l~~V~L~V~Dl~~s~~FY~~-lg~~~~~~~~--~~~--~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (149)
T 4gym_A           10 LTFVNLPVADVAASQAFFGT-LGFEFNPKFT--DES--CACMVVSEQ-A--FVMLIDRARFADFTSKPIADATATTEAIV   81 (149)
T ss_dssp             CEEEEEEESCHHHHHHHHHH-TTCEECGGGC--BTT--EEEEEEETT-E--EEEEEEHHHHGGGCSSCBCCTTTCBSCEE
T ss_pred             EEEEEEEeCCHHHHHHHHHH-hCCCcceeec--CCc--eeEEeecCc-c--eEeeeccccccccccccCCCCCCCCeeEE
Confidence            68999999999999999998 5555443221  121  222222221 1  112211     0 01 1112233455689


Q ss_pred             EEEeC---CHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCC
Q 024779           74 GIAVD---DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  126 (262)
Q Consensus        74 ~~~v~---d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~  126 (262)
                      +|.|+   ++++++++++++|+++..+|....  .++++||.|||||.|||+...+
T Consensus        82 a~~v~~~~~vd~~~~~~~~~g~~~~~~p~~~~--~~~~~~f~DPDGn~iEi~~~~p  135 (149)
T 4gym_A           82 CVSAIDRDDVDRFADTALGAGGTVARDPMDYG--FMYGRSFHDLDGHLWEVMWMSA  135 (149)
T ss_dssp             EEECSSHHHHHHHHHHHHHTTCEECSCCEECS--SEEEEEEECTTCCEEEEEEECT
T ss_pred             EEEeccHHHHHHHHHHHHhcCceeeccccccC--CEEEEEEEcCCCCEEEEEEECh
Confidence            99997   478899999999999998877654  5688999999999999997544

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.67  E-value=3.7e-16  Score=113.43  Aligned_cols=115  Identities=13%  Similarity=0.135  Sum_probs=78.6

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeee-ccCcCccceeeeeccCCCCcceEEEEeeecCCccccc-CCce------
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRK-RDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDK-GNAY------  200 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~------  200 (262)
                      .++.|+.|.|+|++++++||+++|||++... ...++  +.+  ++       ..+.|....+..+... ....      
T Consensus        20 ~~~~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~--~~~--~g-------~~l~l~~~~~~~~~~~~~~~~~~~g~~   88 (148)
T 3bt3_A           20 VRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDEG--FGD--YG-------CVFDYPSEVAVAHLTPFRGFHLFKGEP   88 (148)
T ss_dssp             EEECCCEEEESCHHHHHHHHHHTTCCEEEEEEECTTS--CEE--EE-------EEESSCTTTTSCC--CCCSEEEEESCC
T ss_pred             EEeeeEEEEECCHHHHHHHHHhccCCEEEeeeecCCC--ccE--Ec-------cEEEEeccCCCcccccccccceeeccC
Confidence            3678999999999999999999999998532 11122  222  21       1133311111111110 0111      


Q ss_pred             --eEEEE-EecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecc
Q 024779          201 --AQIAI-GTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNV  255 (262)
Q Consensus       201 --~~i~~-~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  255 (262)
                        ++.+| .|+|+++++++|+++|+++..+|...++| .+.+|++|||||.|||++..
T Consensus        89 ~~~~~~~~~v~dvd~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~  145 (148)
T 3bt3_A           89 IKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPWG-ARECSITTTDGCILRFFESI  145 (148)
T ss_dssp             CSSEEEEEEEECHHHHHHHHHHTTCCCBCCCEEETTT-EEEEEEECTTSCEEEEEEEC
T ss_pred             CCccEEEEEcCCHHHHHHHHHHcCCccccCcccCCCc-cEEEEEECCCCCEEEEeeec
Confidence              22255 89999999999999999999888777764 37899999999999999864

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.66  E-value=3.2e-16  Score=112.68  Aligned_cols=113  Identities=19%  Similarity=0.185  Sum_probs=80.4

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEe-----ee--c-CCCCCCCCCCCcee
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIEL-----TY--N-YGVDKYDIGTGFGH   72 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~--~-~~~~~~~~~~~~~~   72 (262)
                      ++|+.|.|+|++++++||+++|||++..+.+      ....+.  . .  +.+..     ..  + ........+.+..|
T Consensus         9 l~~v~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~~~--~-g--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (141)
T 2qnt_A            9 FVNPIPFVRDINRSKSFYRDRLGLKILEDFG------SFVLFE--T-G--FAIHEGRSLEETIWRTSSDAQEAYGRRNML   77 (141)
T ss_dssp             CCCCCCEESCHHHHHHHHHHTTCCCEEEECS------SEEEET--T-S--CEEEEHHHHHHHHHSCCC--CCCSCCSSCE
T ss_pred             cceEEEEECCHHHHHHHHHHhcCCEEEEEcC------CcEEEe--c-c--ceeccCchhhhhccccCCccccccCCCceE
Confidence            5799999999999999999999999876431      122222  1 1  12221     01  0 11111223457789


Q ss_pred             EEEEeCCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCC
Q 024779           73 FGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  126 (262)
Q Consensus        73 i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~  126 (262)
                      ++|.|+|+++++++|++ |+++..+|...++ +.+.+++.||+||.|||++..+
T Consensus        78 ~~~~v~dv~~~~~~l~~-G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~  129 (141)
T 2qnt_A           78 LYFEHADVDAAFQDIAP-HVELIHPLERQAW-GQRVFRFYDPDGHAIEVGESLS  129 (141)
T ss_dssp             EEEEESCHHHHHC-CGG-GSCEEEEEEECTT-SCEEEEEECTTCCEEEEEECC-
T ss_pred             EEEEeCcHHHHHHHHHc-CCccccCCccCCC-CCEEEEEECCCCCEEEEEecch
Confidence            99999999999999999 9998877766664 4678899999999999998754

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.66  E-value=1.2e-15  Score=110.24  Aligned_cols=116  Identities=14%  Similarity=0.164  Sum_probs=79.5

Q ss_pred             eeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeec--CC------cccccCCceeEE
Q 024779          132 CQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNY--GV------TDYDKGNAYAQI  203 (262)
Q Consensus       132 ~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~------~~~~~~~~~~~i  203 (262)
                      ..+.|.|+|++++++||+++|||++.....  ...+  .++..+    ...+.|....  +.      ...+.+.+. ++
T Consensus         7 ~~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~--~~~~--~~l~~g----~~~l~l~~~~~~~~~~~~~~~~~~~~~g~-~~   77 (145)
T 2rk9_A            7 VVPELYCFDINVSQSFFVDVLGFEVKYERP--DEEF--VYLTLD----GVDVMLEGIAGKSRKWLSGDLEFPLGSGV-NF   77 (145)
T ss_dssp             EEEEEEESSHHHHHHHHHHTTCCEEEEEEG--GGTE--EEEEET----TEEEEEEEC-----------CCSSTTTTE-EE
T ss_pred             ceEEEEECCHHHHHHHHHhccCCEEEeecC--CCCE--EEEEcC----CeEEEEEeccCCCcccccCccccCCCCce-EE
Confidence            358899999999999999999999874322  1122  334432    2345554421  10      011223454 49


Q ss_pred             EEEecCHHHHHHHHHH-hCCeeecCCccCCC------CcceEEEEeCCCCcEEEEEeccc
Q 024779          204 AIGTDDVYKTAEAIKL-FGGKVTREPGPLPG------INTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       204 ~~~v~dl~~~~~~l~~-~g~~~~~~~~~~~~------~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                      +|.|+|+++++++|++ +|+++..+|...++      ..++.++++|||||.|||++...
T Consensus        78 ~~~v~dvd~~~~~l~~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~DPdG~~iel~~~~~  137 (145)
T 2rk9_A           78 QWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGYLFRFCQDIH  137 (145)
T ss_dssp             EEECSCHHHHHHHHHHHHGGGEEEEEEEEEC-----CCEEEEEEEECTTCCEEEEEEC--
T ss_pred             EEEECCHHHHHHHHHhhCCCeEecCccccccccCCCCCcceEEEEECCCCCEEEEEEcCC
Confidence            9999999999999999 99999887764222      12478899999999999999765

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.66  E-value=1.1e-15  Score=122.84  Aligned_cols=124  Identities=15%  Similarity=0.082  Sum_probs=88.9

Q ss_pred             CCCCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCc-cceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEE
Q 024779          127 TPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEY-KYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAI  205 (262)
Q Consensus       127 ~~~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~  205 (262)
                      .++.+.|+.|.|+|++++++||+++|||++......... .+..  +...   +.....+...... .....++.++++|
T Consensus        29 ~~g~~~~v~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~~~--~~~~---g~~~~~l~~~~~~-~~~~~~~~~~~~~  102 (282)
T 3oxh_A           29 RQGTPNWVDLQTTDQSAAKKFYTSLFGWGYDDNPVPGGGGVYSM--ATLN---GEAVAAIAPMPPG-APEGMPPIWNTYI  102 (282)
T ss_dssp             CTTSEEEEEEEESCHHHHHHHHHHHHCCEEEEEC-----CCEEE--EEET---TEEEEEEEECCSC-C---CCCEEEEEE
T ss_pred             CCCCcEEEEEecCCHHHHHHHHHHhcCcEEeecCCCCCccCEEE--EEeC---CeeeEeeccCCCC-CCCCCCCcEEEEE
Confidence            457899999999999999999999999998765331110 2332  2221   1222333322211 1123457789999


Q ss_pred             EecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecccc
Q 024779          206 GTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDF  257 (262)
Q Consensus       206 ~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~  257 (262)
                      .|+|+++++++++++|+++..+|...++. ++.++++||+||.|+|++....
T Consensus       103 ~v~d~d~~~~~l~~~G~~~~~~p~~~~~~-g~~~~~~DP~G~~i~l~~~~~~  153 (282)
T 3oxh_A          103 AVDDVDAVVDKVVPGGGQVMMPAFDIGDA-GRMSFITDPTGAAVGLWQANRH  153 (282)
T ss_dssp             ECSCHHHHHTTTTTTTCEEEEEEEEETTT-EEEEEEECTTCCEEEEEEESSC
T ss_pred             EeCCHHHHHHHHHHCCCEEEECCEecCCC-eEEEEEECCCCCEEEEEEcccc
Confidence            99999999999999999999888776542 5899999999999999997653

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.65  E-value=1.6e-15  Score=125.08  Aligned_cols=118  Identities=11%  Similarity=0.154  Sum_probs=89.1

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCC-
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD-   79 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d-   79 (262)
                      |+||.|.|+|++++.+||+++|||++..... +.+.....|+..+.....  +.+....    .....+++|++|.|+| 
T Consensus       154 l~Hv~l~v~D~~~a~~FY~~vLG~~~~~~~~-~~g~~~~~~l~~~~~~~~--l~~~~~~----~~~~~~~~Hiaf~v~d~  226 (339)
T 3lm4_A          154 IDHLNLMSSDVTAVKDSFERHLGFRTTERVV-DGNVEIGAWMSSNLLGHE--VACMRDM----TGGHGKLHHLAFFYGTG  226 (339)
T ss_dssp             EEEEEEEESCHHHHHHHHHHHHCCEEEEEEE-ETTEEEEEEEESSSSSCS--EEEEECT----TSCCSEEEEEEEECCCH
T ss_pred             eeeEEEEcCCHHHHHHHHHHhCCCeEEEEEe-cCCcEEEEEEEeCCCceE--EEEeccC----CCCCCceeEEEEEeCCH
Confidence            5799999999999999999999999987654 233344667766554333  3443321    1223468999999999 


Q ss_pred             --HHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcC
Q 024779           80 --VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        80 --~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                        +++++++|+++|+++...|.....+...++||.||+||.||++...
T Consensus       227 ~~v~~~~~~l~~~G~~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  274 (339)
T 3lm4_A          227 QHNIDAVEMFRDYDIQIEAGPDKHGITQSQFLYVFEPGGNRIELFGEA  274 (339)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEEEETGGGEEEEEEECTTSCEEEEECCC
T ss_pred             HHHHHHHHHHHHCCCeEEeCCcccccCCceEEEEEcCCCCEEEEEEcC
Confidence              8889999999999987766654444568899999999999998654

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.65  E-value=3.5e-15  Score=107.85  Aligned_cols=115  Identities=16%  Similarity=0.225  Sum_probs=79.3

Q ss_pred             eEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecC--C------CCCCCCCCCceeEE
Q 024779            3 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY--G------VDKYDIGTGFGHFG   74 (262)
Q Consensus         3 hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~------~~~~~~~~~~~~i~   74 (262)
                      .+.|.|+|++++++||+++|||++.....  ..  ..+++..+.  .  .+.+....  .      ......+.++. ++
T Consensus         8 ~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~--~~--~~~~l~~g~--~--~l~l~~~~~~~~~~~~~~~~~~~~~g~~-~~   78 (145)
T 2rk9_A            8 VPELYCFDINVSQSFFVDVLGFEVKYERP--DE--EFVYLTLDG--V--DVMLEGIAGKSRKWLSGDLEFPLGSGVN-FQ   78 (145)
T ss_dssp             EEEEEESSHHHHHHHHHHTTCCEEEEEEG--GG--TEEEEEETT--E--EEEEEEC-----------CCSSTTTTEE-EE
T ss_pred             eEEEEECCHHHHHHHHHhccCCEEEeecC--CC--CEEEEEcCC--e--EEEEEeccCCCcccccCccccCCCCceE-EE
Confidence            57899999999999999999999875332  11  234555442  2  23333320  0      11122344665 99


Q ss_pred             EEeCCHHHHHHHHHH-cCCeeecCCccc------CCCCeEEEEEECCCCCEEEEEEcCC
Q 024779           75 IAVDDVAKTVELIKA-KGGKVTREPGPV------KGGNTVIAFIEDPDGYKFELLERGP  126 (262)
Q Consensus        75 ~~v~d~~~~~~~l~~-~G~~~~~~~~~~------~~~~~~~~~~~DP~G~~iel~~~~~  126 (262)
                      |.|+|+++++++|++ +|+++..+|...      ..++.+.++|.|||||.|||++...
T Consensus        79 ~~v~dvd~~~~~l~~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~DPdG~~iel~~~~~  137 (145)
T 2rk9_A           79 WDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGYLFRFCQDIH  137 (145)
T ss_dssp             EECSCHHHHHHHHHHHHGGGEEEEEEEEEC-----CCEEEEEEEECTTCCEEEEEEC--
T ss_pred             EEECCHHHHHHHHHhhCCCeEecCccccccccCCCCCcceEEEEECCCCCEEEEEEcCC
Confidence            999999999999999 999987766531      1224577889999999999998653

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.64  E-value=6.7e-15  Score=119.82  Aligned_cols=117  Identities=15%  Similarity=0.231  Sum_probs=87.1

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCC-CcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCC
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPE-EKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD   79 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d   79 (262)
                      |+||+|.|+|++++.+||+++|||++......+. +.....|+..+.....+  .+...      ....+++|++|.|+|
T Consensus       152 i~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------~~~~~~~Hiaf~v~d  223 (309)
T 3hpy_A          152 LDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHKVHDI--AFVEY------PEKGKLHHCSFLLES  223 (309)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTSCCEEEEEEECSSSCSEEEEEEESSSSSCSE--EEEEC------SSTTEEEEEEEECSS
T ss_pred             eeeEEEEeCCHHHHHHHHHHhcCCEEEEEEecCCCCceEEEEEecCCCceeE--EEecC------CCCCceeEEEEECCC
Confidence            5899999999999999999999999887654332 23356677665443222  23221      123458999999998


Q ss_pred             HHH---HHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcC
Q 024779           80 VAK---TVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        80 ~~~---~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                      +++   ++++|+++|+++...|.....+..+++||+||+||.||+....
T Consensus       224 ~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~g  272 (309)
T 3hpy_A          224 WEQVLRAGDIMSMNEVNVDIGPTRHGVTRGCTIYAWDPSGNRFETFMGG  272 (309)
T ss_dssp             HHHHHHHHHHHHHTTCCBSSCSEECSSSSEEEEEEECTTSCEEEEEEEC
T ss_pred             HHHHHHHHHHHHHCCCEEEeCCccCCCCccEEEEEECCCCCEEEEEeCC
Confidence            664   6789999999987776655545678899999999999999763

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.64  E-value=4.5e-15  Score=120.70  Aligned_cols=141  Identities=16%  Similarity=0.247  Sum_probs=95.8

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCC-ceeEEEEeC-
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTG-FGHFGIAVD-   78 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~i~~~v~-   78 (262)
                      |+||.|.|+|++++++||+++|||++........+.....|+..+.....  +.+...       ...| +.|++|.|+ 
T Consensus       151 i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~-------~~~g~~~hi~f~v~d  221 (307)
T 1mpy_A          151 FDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHD--VAFIHH-------PEKGRLHHVSFHLET  221 (307)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCS--EEEEEC-------SSSSEEEEEEEECSC
T ss_pred             eeeEEEEcCCHHHHHHHHHHHcCCeeEeeeecCCCcEEEEEEEcCCCcee--EEEecC-------CCCCcceEEEEEcCC
Confidence            57999999999999999999999998865432222122245554433222  233221       1234 789999999 


Q ss_pred             --CHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCCCC-CCceeEEeeecChhhhHHHHHH
Q 024779           79 --DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTP-EPLCQVMLRVGDLDRSINFYEQ  150 (262)
Q Consensus        79 --d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~~~-~~~~~v~l~v~d~~~~~~FY~~  150 (262)
                        |+++++++|+++|+++..+|.....+..+.+||.||+||.|||++..... ..-..+.....++.+...||..
T Consensus       222 ~~dv~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~  296 (307)
T 1mpy_A          222 WEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGDYNYPDHKPVTWTTDQLGKAIFYHDR  296 (307)
T ss_dssp             HHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCCBCCTTSCCEEEEGGGHHHHHCTTTC
T ss_pred             HHHHHHHHHHHHHCCCceeeCCccCCCCCceEEEEECCCCcEEEEEecccccCCCCCCeEeecccccccceecCc
Confidence              56778899999999987666554433467889999999999999865321 1112244566677777777754

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.63  E-value=8.2e-15  Score=118.79  Aligned_cols=117  Identities=19%  Similarity=0.331  Sum_probs=84.5

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCC--------C-cceeeEeeecCCCceeEEEeeecCCCCCCCCCCCce
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPE--------E-KYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFG   71 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~--------~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~   71 (262)
                      |+||.|.|+|++++++||+++|||++......+.        + .....|+..+....  .+.+...      ....++.
T Consensus       143 l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~--~~~~~~~------~~~~g~~  214 (300)
T 2zyq_A          143 MGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPRHH--SLAFLPM------PTSSGIV  214 (300)
T ss_dssp             SCEEEEECSCHHHHHHHHHTTTCCEEEEEEEECGGGGTCCTTSCCEEEEEEESSSBSC--SEEEESS------CCSSSEE
T ss_pred             cCeEEEEeCCHHHHHHHHHHhcCCEEeeeecccccccccCCCCCceEEEEEEECCCcc--EEEEecC------CCCCCce
Confidence            6899999999999999999999999875432111        1 12345555543222  2333321      1235788


Q ss_pred             eEEEEeCCHHH---HHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcC
Q 024779           72 HFGIAVDDVAK---TVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        72 ~i~~~v~d~~~---~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                      |++|.|+|+++   ++++|+++|+++..+|.....+..+++||.||+||.|||++..
T Consensus       215 h~af~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~  271 (300)
T 2zyq_A          215 HLMVEVEQADDVGLCLDRALRRKVPMSATLGRHVNDLMLSFYMKTPGGFDIEFGCEG  271 (300)
T ss_dssp             EEEEEBSSHHHHHHHHHHHHHTTCCEEEEEEEESSSCCEEEEEECTTSSEEEEEECC
T ss_pred             EEEEEeCCHHHHHHHHHHHHHCCCceeecccccCCCCeEEEEEECCCCCEEEEEeCC
Confidence            99999999655   5999999999988766554444578899999999999999753

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.62  E-value=9.1e-15  Score=119.76  Aligned_cols=115  Identities=20%  Similarity=0.260  Sum_probs=86.0

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCH
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDV   80 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~   80 (262)
                      |+||.|.|+|++++.+|| ++|||++........+.....|+..+...+.  +.+...       .+.+++|++|.|+|+
T Consensus       153 l~Hv~l~v~D~~~a~~FY-~~LGf~~~~~~~~~~g~~~~~f~~~~~~~~~--~~~~~~-------~~~~~~Hiaf~v~d~  222 (323)
T 1f1u_A          153 LDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHD--TALTGG-------NGPRMHHVAFATHEK  222 (323)
T ss_dssp             EEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSCS--EEEEES-------SBSEEEEEEEECSSH
T ss_pred             eeeEEEecCCHHHHHHHH-HhCCCeEEEEEEcCCCcEEEEEEEcCCCccc--EEEeCC-------CCCCceEEEEECCCH
Confidence            589999999999999999 9999998876543333334566665443222  333321       123889999999999


Q ss_pred             HH---HHHHHHHcCC--eeecCCcccCCCCeEEEEEECCCCCEEEEEEcC
Q 024779           81 AK---TVELIKAKGG--KVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        81 ~~---~~~~l~~~G~--~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                      ++   ++++|+++|+  ++...|.....+...++||.||+||.||++...
T Consensus       223 d~v~~~~~~l~~~G~~~~i~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~  272 (323)
T 1f1u_A          223 HNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQD  272 (323)
T ss_dssp             HHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECC
T ss_pred             HHHHHHHHHHHHCCCccccccCCCccCCCCcEEEEEECCCCCEEEEEeCC
Confidence            88   9999999999  887555444444667899999999999999653

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.61  E-value=6.3e-15  Score=106.90  Aligned_cols=114  Identities=19%  Similarity=0.181  Sum_probs=76.1

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCC--CC-------Cce
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDI--GT-------GFG   71 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~-------~~~   71 (262)
                      +.|+.|.|+|++++++||+++|||++........ ..  .++  +.     .+.+...........  +.       ...
T Consensus        22 ~~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~-~~--~~~--g~-----~l~l~~~~~~~~~~~~~~~~~~~g~~~~~   91 (148)
T 3bt3_A           22 ENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDE-GF--GDY--GC-----VFDYPSEVAVAHLTPFRGFHLFKGEPIKG   91 (148)
T ss_dssp             ECCCEEEESCHHHHHHHHHHTTCCEEEEEEECTT-SC--EEE--EE-----EESSCTTTTSCC--CCCSEEEEESCCCSS
T ss_pred             eeeEEEEECCHHHHHHHHHhccCCEEEeeeecCC-Cc--cEE--cc-----EEEEeccCCCcccccccccceeeccCCCc
Confidence            4799999999999999999999999864221111 11  222  21     133311111001000  11       111


Q ss_pred             eEEE-EeCCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcC
Q 024779           72 HFGI-AVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        72 ~i~~-~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                      +.++ .|+|+++++++|+++|+++..+|...++ +.+.++|.|||||.|+|.++.
T Consensus        92 ~~~~~~v~dvd~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~  145 (148)
T 3bt3_A           92 VAGFMMIEGIDALHKYVKENGWDQISDIYTQPW-GARECSITTTDGCILRFFESI  145 (148)
T ss_dssp             EEEEEEEECHHHHHHHHHHTTCCCBCCCEEETT-TEEEEEEECTTSCEEEEEEEC
T ss_pred             cEEEEEcCCHHHHHHHHHHcCCccccCcccCCC-ccEEEEEECCCCCEEEEeeec
Confidence            2255 9999999999999999998888766664 567899999999999999864

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.61  E-value=9.4e-15  Score=107.99  Aligned_cols=118  Identities=15%  Similarity=0.099  Sum_probs=78.7

Q ss_pred             eeEEeeecC--hhhhHHHHHHhcCCeeeeecc-------CcCccceeeeeccCCCCcceEEEEeeecCC-c-ccccC-Cc
Q 024779          132 CQVMLRVGD--LDRSINFYEQAFGMELLRKRD-------NPEYKYTIAMMGYGPEDKNVVLELTYNYGV-T-DYDKG-NA  199 (262)
Q Consensus       132 ~~v~l~v~d--~~~~~~FY~~~lG~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~-~~~~~-~~  199 (262)
                      .+..|.|+|  ++++++||+++|||++.....       .+........+..+    ...+.+....+. . +...+ ..
T Consensus        26 i~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~----g~~l~l~~~~~~~~~~~~~~~~~  101 (166)
T 1xy7_A           26 FKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLA----GSSFVVCDVSSLPGFSTAKSEGS  101 (166)
T ss_dssp             EEEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEET----TEEEEEEEGGGSTTCCCCCTTSC
T ss_pred             EEEEEEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEEC----CeEEEEeCCCcccCCccccCCCC
Confidence            578899999  999999999999999875431       11111222223322    233444332111 0 11110 23


Q ss_pred             eeEEEEEecCHHHHHHHHHHhCCeeecCCccC--CCCcceEEEEeCCCCcEEEEEeccc
Q 024779          200 YAQIAIGTDDVYKTAEAIKLFGGKVTREPGPL--PGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       200 ~~~i~~~v~dl~~~~~~l~~~g~~~~~~~~~~--~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                      ..+++|.|+|+++++++|+++|++ +.+|.+.  ++  ++.++++||+||.|+|++...
T Consensus       102 g~~l~~~vdDvda~~~~l~~~G~~-~~~~~~~~~~~--~r~~~v~DP~G~~~~l~~~~~  157 (166)
T 1xy7_A          102 GVTFLLGTKDAEAAVAKAVDAGAV-KVEVTEAEVEL--GFKGKVTDPFGVTWIFAEKKT  157 (166)
T ss_dssp             CCEEEEECSCHHHHHHHHHHTTCE-ECCCCHHHHHT--TEEEEEECTTSCEEEEEC---
T ss_pred             cEEEEEEcCCHHHHHHHHHHCCCE-ECCcccccCcc--cEEEEEECCCCCEEEEEeecC
Confidence            358999999999999999999999 9888877  77  589999999999999998653

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.61  E-value=1.1e-14  Score=120.15  Aligned_cols=126  Identities=13%  Similarity=0.116  Sum_probs=87.7

Q ss_pred             CCCceeEEeeecChhhhHHHHHHhcCCeeeeeccC-cCccceeeeeccCCCCcceEEEEeeecCCcc-cccCCceeEEEE
Q 024779          128 PEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDN-PEYKYTIAMMGYGPEDKNVVLELTYNYGVTD-YDKGNAYAQIAI  205 (262)
Q Consensus       128 ~~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~i~~  205 (262)
                      ..++.||.|.|+|++++++||+++|||++...... .+......++..........+.+........ .....+..|++|
T Consensus        28 i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~hiaf  107 (338)
T 1zsw_A           28 IKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIGL  107 (338)
T ss_dssp             CCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEEE
T ss_pred             CccccEEEEEcCCHHHHHHHHHHhcCCEEEEeecccCCCceEEEEEcCCCCCCCCEEEEEECCCCccCcCCCCCeeeEEE
Confidence            46899999999999999999999999998765321 1111112222221111234555554322111 112357889999


Q ss_pred             Eec---CHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          206 GTD---DVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       206 ~v~---dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                      .|+   |+++++++|+++|+++..++. . +| .+.+||+|||||.|||++..+
T Consensus       108 ~v~~~~dld~~~~~l~~~G~~~~~~~~-~-~G-~~~~~f~DPdG~~iel~~~~~  158 (338)
T 1zsw_A          108 LVPSEDSLHYWKERFEKFDVKHSEMTT-Y-AN-RPALQFEDAEGLRLVLLVSNG  158 (338)
T ss_dssp             EESCHHHHHHHHHHHHHTTCEECCSEE-E-TT-EEEEEEECTTCCEEEEEECTT
T ss_pred             EcCCHHHHHHHHHHHHHCCCccccccc-c-CC-cEEEEEECCCCCEEEEEEcCC
Confidence            998   799999999999999986654 2 33 388999999999999999764

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.60  E-value=1.1e-14  Score=120.90  Aligned_cols=116  Identities=21%  Similarity=0.155  Sum_probs=86.8

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEec
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTD  208 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~  208 (262)
                      .++.||.|.|+|++++++||+++|||++..+..      ...++.......+..+.+...       ..+++.|++|.|.
T Consensus        16 ~rl~hV~l~V~DLe~s~~FY~dvLGL~~~~~~~------~~~~lr~~~~~~~~~l~l~~~-------~~~gl~~~a~~v~   82 (365)
T 4ghg_A           16 LRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDE------NQIYLRSFEEFIHHNLVLTKG-------PVAALKAMAFRVR   82 (365)
T ss_dssp             EEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEEC-------SSCEEEEEEEEES
T ss_pred             CEEEEEEEEeCCHHHHHHHHhhCCCCEEEEEcC------CEEEEEeCCCCcceEEEeccC-------CCCCcceEEEEeC
Confidence            378999999999999999999999999987632      113333332333445555421       2358899999996


Q ss_pred             ---CHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecccc
Q 024779          209 ---DVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDF  257 (262)
Q Consensus       209 ---dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~  257 (262)
                         +++++.++|+++|+.+...+.....+.++.++|+||+||.|||+...+.
T Consensus        83 s~~dLd~~~~~L~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~~~~~  134 (365)
T 4ghg_A           83 TPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFFETTH  134 (365)
T ss_dssp             SHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBCC
T ss_pred             CHHHHHHHHHHHHHcCCcceeccccccCCCceEEEEECCCCCEEEEEEEeec
Confidence               5888999999999999876644433335789999999999999976543

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.59  E-value=2.5e-14  Score=115.46  Aligned_cols=116  Identities=23%  Similarity=0.317  Sum_probs=83.1

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCC--CC-cceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEe
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIP--EE-KYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV   77 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v   77 (262)
                      |+||.|.|+|++++++||+++|||++......+  .+ .....|+..+.....  +.+...      ....+++|++|.|
T Consensus       143 l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~hiaf~v  214 (292)
T 1kw3_B          143 IGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHT--IALAAF------PIPKRIHHFMLQA  214 (292)
T ss_dssp             SCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCS--EEEECC------SCSSSEEEEEEEB
T ss_pred             cceEEEecCCHHHHHHHHHhccCCEEeeeeecccCCCccceEEEEEECCCcce--EEEecC------CCCCceEEEEEEc
Confidence            689999999999999999999999987543211  11 123456655432222  333321      1135788999999


Q ss_pred             CCHHH---HHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCC-EEEEEEcC
Q 024779           78 DDVAK---TVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGY-KFELLERG  125 (262)
Q Consensus        78 ~d~~~---~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~-~iel~~~~  125 (262)
                      +|+++   ++++|+ +|+++..+|.....+..+++||.||+|| .|||....
T Consensus       215 ~d~~~v~~~~~~l~-~G~~~~~~p~~~~~~~~~~~y~~DPdG~~~iEl~~~~  265 (292)
T 1kw3_B          215 NTIDDVGYAFDRLD-AAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWGP  265 (292)
T ss_dssp             SSHHHHHHHHHHHH-HTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEECC
T ss_pred             CCHHHHHHHHHHHh-CCCceeecCcccCCCCeEEEEEECCCCCeeEEEEECC
Confidence            98655   677999 9999887776655555678899999999 99999754

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.59  E-value=2.4e-14  Score=116.63  Aligned_cols=110  Identities=21%  Similarity=0.345  Sum_probs=84.9

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCH
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDV   80 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~   80 (262)
                      |+||.|.|+|++++.+||+++|||++.....  .   ...|+..+....  .+.+...      .  .|+.|++|.|+|+
T Consensus       142 l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~---~~~fl~~~~~~~--~l~l~~~------~--~g~~hi~f~v~d~  206 (310)
T 3b59_A          142 ISHIVLHSPNHQDMVKFFTDVLGFKVSDWLG--D---FMCFLRCNSAHH--RIAILPG------P--PCLNHVAYDMLSV  206 (310)
T ss_dssp             EEEEEEEETTHHHHHHHHHHTSCCEEEEEET--T---TEEEEESSSBSC--SEEEEES------S--SEEEEEEEECSSH
T ss_pred             eceEEEecCCHHHHHHHHHhCCCCEEEEeeC--C---eEEEEecCCCcc--eEEEECC------C--CceEEEEEEcCCH
Confidence            5799999999999999999999999986542  1   356666544322  2333331      1  4688999999997


Q ss_pred             HHH---HHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcC
Q 024779           81 AKT---VELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        81 ~~~---~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                      +++   +++|+++|+++...|.....+..+++||.||+||.||+.+..
T Consensus       207 d~~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~  254 (310)
T 3b59_A          207 DDMMRGAHRLKVKGIDIGWGPGRHTAGNNTFSYFVTPGGFVTEYTSEL  254 (310)
T ss_dssp             HHHHHHHHHHHHTTCCCSEEEEECSTTCCEEEEEECTTSCEEEEEECC
T ss_pred             HHHHHHHHHHHHcCCceeecCccccCCCcEEEEEECCCCCEEEEEeCc
Confidence            776   999999999987666554445668899999999999999865

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.59  E-value=2.8e-14  Score=115.49  Aligned_cols=116  Identities=21%  Similarity=0.296  Sum_probs=84.2

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCC---CCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEe
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIP---EEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV   77 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v   77 (262)
                      |+||.|.|+|++++++||+++|||++......+   +......|+..+.....  +.+...      +...++.|++|.|
T Consensus       143 l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~l~~~------~~~~~~~hiaf~v  214 (297)
T 1lgt_A          143 LGHFVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNERHHT--LAIAAF------PLPKRIHHFMLEV  214 (297)
T ss_dssp             SCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCS--EEEECC------CCSSSEEEEEEEB
T ss_pred             cceEEEecCCHHHHHHHHHHhcCCeeeeEEeccCCCCccceEEEEEeCCCcce--EEEEcC------CCCCCceEEEEeC
Confidence            689999999999999999999999987642211   10123456554432222  334321      1135788999999


Q ss_pred             CCHHHHH---HHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcC
Q 024779           78 DDVAKTV---ELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        78 ~d~~~~~---~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                      +|++++.   ++ +++|+++..+|.....+...++||.||+||.|||++..
T Consensus       215 ~d~~~~~~~~~~-~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  264 (297)
T 1lgt_A          215 ASLDDVGFAFDR-VDADGLITSTLGRHTNDHMVSFYASTPSGVEVEYGWSA  264 (297)
T ss_dssp             SCHHHHHHHHHH-HHTTTCEEEEEEEESSSCCEEEEEECTTSCEEEEEECC
T ss_pred             CCHHHHHHHHHH-HhCCCcccccCcccCCCCcEEEEEECCCCcEEEEecCC
Confidence            9987766   88 99999998776665555567789999999999999864

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.58  E-value=1.6e-14  Score=117.29  Aligned_cols=116  Identities=16%  Similarity=0.283  Sum_probs=82.8

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCC--CC-cceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEe
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIP--EE-KYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV   77 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v   77 (262)
                      |+||.|.|+|++++.+|| ++|||++......+  .+ .....|+..+.....  +.+...      ....++.|++|.|
T Consensus       147 i~hv~l~v~D~~~s~~FY-~vLG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~hiaf~v  217 (305)
T 2wl9_A          147 LGHIIIREDDVEEATRFY-RLLGLEGAVEYKFALPNGAVGTPVFMHCNDRHHS--LAFGVG------PMDKRINHLMIEY  217 (305)
T ss_dssp             SCEEEECCSCHHHHHHHH-HHHTCEEEECBCEECTTSCEECCEEEESSSSSCS--EEECCS------CCSSSEEEEEEEE
T ss_pred             eeeEEEECCCHHHHHHHH-HHcCCeeeeeEecccCCCccceEEEEEcCCCceE--EEEecC------CCCCCceEEEEEc
Confidence            689999999999999999 99999986532111  11 223455555433222  233211      1235788999999


Q ss_pred             CC---HHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcC
Q 024779           78 DD---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        78 ~d---~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                      +|   +++++++|+++|+++..+|.....+...++||.||+||.|||+...
T Consensus       218 ~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  268 (305)
T 2wl9_A          218 THLDDLGYAHDLVRQQKIDVTLQIGKHSNDEALTFYCANPSGWLWEPGWGS  268 (305)
T ss_dssp             SSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHcCCCccccCcccCCCCcEEEEEECCCCCEEEEEeCC
Confidence            98   5668889999999988666555444567789999999999999764

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.57  E-value=1.6e-13  Score=110.96  Aligned_cols=169  Identities=11%  Similarity=0.043  Sum_probs=107.2

Q ss_pred             CceeEEEEeCC-HHHHHHHHHHcCCeeecCCcc-c-CCCCeEEEEEECCCCCEEEEEEcCC---CCCCceeEEeeecChh
Q 024779           69 GFGHFGIAVDD-VAKTVELIKAKGGKVTREPGP-V-KGGNTVIAFIEDPDGYKFELLERGP---TPEPLCQVMLRVGDLD  142 (262)
Q Consensus        69 ~~~~i~~~v~d-~~~~~~~l~~~G~~~~~~~~~-~-~~~~~~~~~~~DP~G~~iel~~~~~---~~~~~~~v~l~v~d~~  142 (262)
                      ++..+.+.|.. =.++.+-+++.|++....-.. . ..|.         +-..+++....-   .+....++.+.|.|++
T Consensus       125 g~~~i~~~v~~~N~~s~~ly~k~GF~~~g~~~~~~~~~g~---------d~~~~~l~~~~~~~~~~~~~~~~~l~v~D~~  195 (301)
T 2zw5_A          125 GLDRVEAWIEAGNRRSLAVAARVGLTERARLAQHYPHRPG---------PHEMVVLGKARAEEPLTTLAVITELPVRDVA  195 (301)
T ss_dssp             CCSEEEEEEESSCHHHHHHHHHTTCEEEEEEEECCTTSSS---------CEEEEEEEEESSCCSCEEEEEEEEEEESCHH
T ss_pred             CccEEEEEeCCCCHHHHHHHHHcCCcCcceehhhcccCCC---------CeEEEEEeHHHhhhhcccceeEEEEEeCCHH
Confidence            66667776653 345566778889877543111 1 1111         112344443321   2234457889999999


Q ss_pred             hhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEec-CHHHHHHHHHHhC
Q 024779          143 RSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTD-DVYKTAEAIKLFG  221 (262)
Q Consensus       143 ~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~-dl~~~~~~l~~~g  221 (262)
                      ++++||+++|||++......+ +.+  ..+..++......+.+...    +...+....+++|.|+ |+++++++++++|
T Consensus       196 ~a~~FY~~~lG~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~v~~dvd~~~~~~~~~G  268 (301)
T 2zw5_A          196 ATLRLVEAALGARTAFAIGDP-PEF--AEAALTPWSAGPRFRLAAV----PGPGPVEPVRLHLDAAGTADSLHRRAVDAG  268 (301)
T ss_dssp             HHHHHHHHHSCCEEEEEEETT-EEE--EEEESSSSSSSSEEEEEEC----CCSSCCCCCEEEEEEESCHHHHHHHHHHTT
T ss_pred             HHHHHHHHhcCCeEeeecCCC-ccE--EEEEcCCCccccccccccC----CCcCCCCceEEEEEcCccHHHHHHHHHHcC
Confidence            999999999999987433221 222  2333332111122222111    1112234568999999 9999999999999


Q ss_pred             CeeecCCccCCCCcceEEEEeCCCCcEEEEEec
Q 024779          222 GKVTREPGPLPGINTKITACLDPDGWKTVFVDN  254 (262)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  254 (262)
                      +++..+|.+.++| .+.++++|||||.|+|.+.
T Consensus       269 ~~~~~~~~~~~~g-~~~~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          269 ARVDGPPVRRPWG-RSEFVITLPEGHELTVSAP  300 (301)
T ss_dssp             CCEEEEEEECTTS-CEEEEEECTTSCEEEEEEC
T ss_pred             CccccCcccCCCc-ceEEEEECCCCCEEEeeCC
Confidence            9999998888875 3889999999999999874

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.56  E-value=2.9e-14  Score=115.67  Aligned_cols=115  Identities=17%  Similarity=0.228  Sum_probs=81.4

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCC--CC-cceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEe
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIP--EE-KYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV   77 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v   77 (262)
                      |+||.|.|+|++++++|| ++|||++......+  .+ .....|+..+....  .+.+...      ....+++|++|.|
T Consensus       150 l~hv~l~v~D~~~a~~FY-~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~------~~~~~~~hiaf~v  220 (302)
T 2ehz_A          150 LGHCIVRQTDVAEAHKFY-SLLGFRGDVEYRIPLPNGMTAELSFMHCNARDH--SIAFGAM------PAAKRLNHLMLEY  220 (302)
T ss_dssp             SCEEEECCSCHHHHHHHH-HHTTCBCCEEEEEECTTSCEEEEEEEBSSSBSC--SEEECSC------CCSSSEEEEEEEE
T ss_pred             cceEEEEcCCHHHHHHHH-HhcCCeeeeEEeccCCCCcceEEEEEEeCCCCc--EEEEecC------CCCCceeEEEEEc
Confidence            589999999999999999 99999876432111  11 12345555443222  1233211      1125788999999


Q ss_pred             CCHHH---HHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEc
Q 024779           78 DDVAK---TVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  124 (262)
Q Consensus        78 ~d~~~---~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  124 (262)
                      +|+++   ++++|+++|+++..+|.....+..+++||.||+||.|||+..
T Consensus       221 ~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~  270 (302)
T 2ehz_A          221 THMEDLGYTHQQFVKNEIDIALQLGIHANDKALTFYGATPSGWLIEPGWR  270 (302)
T ss_dssp             SSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEEC
T ss_pred             CCHHHHHHHHHHHHHCCCcEEeCCcccCCCCceEEEEECCCCcEEEEEEC
Confidence            98764   677999999998876655554556789999999999999975

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.56  E-value=7.8e-14  Score=103.04  Aligned_cols=115  Identities=15%  Similarity=0.138  Sum_probs=76.6

Q ss_pred             eEEEEeCC--HHHHHHHHHhhcCcEEEEEec-------CCCCcceeeEeeecCCCceeEEEeeecCCC-C-CCCC--CCC
Q 024779            3 HVVYRVGD--LDRTIKFYTECLGMKLLRKRD-------IPEEKYTNAFLGYGPEDSHFVIELTYNYGV-D-KYDI--GTG   69 (262)
Q Consensus         3 hv~l~v~d--~~~a~~fY~~~lG~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~-~~~~--~~~   69 (262)
                      ++.|.|+|  +++|++||+++|||++.....       ...+....+.+..+.  .  .+.+...... . +...  +.+
T Consensus        27 ~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~g--~--~l~l~~~~~~~~~~~~~~~~~g  102 (166)
T 1xy7_A           27 KQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAG--S--SFVVCDVSSLPGFSTAKSEGSG  102 (166)
T ss_dssp             EEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETT--E--EEEEEEGGGSTTCCCCCTTSCC
T ss_pred             EEEEEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEECC--e--EEEEeCCCcccCCccccCCCCc
Confidence            57899999  999999999999999875321       011222333444442  2  2233322111 0 1111  233


Q ss_pred             ceeEEEEeCCHHHHHHHHHHcCCeeecCCccc--CCCCeEEEEEECCCCCEEEEEEcC
Q 024779           70 FGHFGIAVDDVAKTVELIKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        70 ~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~--~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                      + +++|.|+|+++++++|+++|++ ..++...  ++  .+.++|.||+||.|+|.+..
T Consensus       103 ~-~l~~~vdDvda~~~~l~~~G~~-~~~~~~~~~~~--~r~~~v~DP~G~~~~l~~~~  156 (166)
T 1xy7_A          103 V-TFLLGTKDAEAAVAKAVDAGAV-KVEVTEAEVEL--GFKGKVTDPFGVTWIFAEKK  156 (166)
T ss_dssp             C-EEEEECSCHHHHHHHHHHTTCE-ECCCCHHHHHT--TEEEEEECTTSCEEEEEC--
T ss_pred             E-EEEEEcCCHHHHHHHHHHCCCE-ECCcccccCcc--cEEEEEECCCCCEEEEEeec
Confidence            3 7999999999999999999999 8888776  54  67888999999999999764

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.55  E-value=6.9e-14  Score=110.01  Aligned_cols=113  Identities=19%  Similarity=0.278  Sum_probs=83.4

Q ss_pred             CCCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEe
Q 024779          128 PEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGT  207 (262)
Q Consensus       128 ~~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v  207 (262)
                      ..++.||.|.|+|++++++||+++|||++.....  +    ...+..+    ...+.+....     ..+.+..|++|.|
T Consensus        24 ~~~l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~--~----~~~L~~g----~~~l~l~~~~-----~~~~~~~hiaf~V   88 (252)
T 3pkv_A           24 MTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA--D----AFTIQLG----VSQIQFRAAA-----DGTKPFYHIAINI   88 (252)
T ss_dssp             -CCEEEEEEEESCHHHHHHHHHHHHCGGGEEECS--S----EEEEEET----TEEEEEEECC-----TTCCCCCEEEEEE
T ss_pred             CceEEEEEEEeCCHHHHHHHHHHhcCCEEEEccC--C----EEEEEeC----CEEEEEEECC-----CCCCCeeEEEEEe
Confidence            4689999999999999999999999999987633  1    2334432    2455555421     1234688999987


Q ss_pred             c--CHHHHHHHHHHhCCeeecC-CccC---CCCcceEEEEeCCCCcEEEEEeccc
Q 024779          208 D--DVYKTAEAIKLFGGKVTRE-PGPL---PGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       208 ~--dl~~~~~~l~~~g~~~~~~-~~~~---~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                      .  ++++++++|+++ +++..+ +.+.   ..+..+.+||+|||||.|||++++.
T Consensus        89 ~~~dld~~~~rL~~~-v~~~~~~~~~~~~~~~~g~~~~~f~DPdGn~iEl~~~~~  142 (252)
T 3pkv_A           89 AANHFQEGKAWLSGF-GELLTENDEDQAYFPFFNAYSCYVEDPSGNIIELISRQQ  142 (252)
T ss_dssp             CTTCHHHHHHHHTTS-SCCCCBTTBSCEEETTTTEEEEEEECTTCCEEEEEEESS
T ss_pred             cHHHHHHHHHHHHhc-ceEeccCCccccccccCCeEEEEEECCCCCEEEEEEeCC
Confidence            4  799999999999 998763 2221   1223589999999999999999765

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.54  E-value=1.9e-13  Score=99.13  Aligned_cols=117  Identities=19%  Similarity=0.126  Sum_probs=79.9

Q ss_pred             eEEeeec-ChhhhHHHHHHhcCCeeeeeccCcC------------ccceeeeeccCCCCcceEEEEeeecCCcccccCCc
Q 024779          133 QVMLRVG-DLDRSINFYEQAFGMELLRKRDNPE------------YKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNA  199 (262)
Q Consensus       133 ~v~l~v~-d~~~~~~FY~~~lG~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  199 (262)
                      ...|.|. |++++++||+++||+++.......+            +......+..+    ...+.+....+....+..++
T Consensus         6 ~p~L~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~----~~~l~~~d~~~~~~~~~~~g   81 (149)
T 1u6l_A            6 VPYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVG----SFALMASDNHPAYPYEGIKG   81 (149)
T ss_dssp             EEEEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEET----TEEEEEEECCTTSCCCCCCS
T ss_pred             EEEEEECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEEC----CEEEEEEcCCCccCCCCCCc
Confidence            3678888 9999999999999999875432111            11122223322    22333332211101112233


Q ss_pred             eeEEEEEecC---HHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          200 YAQIAIGTDD---VYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       200 ~~~i~~~v~d---l~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                       .+++|.|+|   +++++++|+ +|++++.+|.+.++|. +.++++||+|+.|+|.+...
T Consensus        82 -~~l~~~v~d~~evd~~~~~l~-~Gg~i~~p~~~~~wG~-r~~~v~Dp~G~~w~l~~~~~  138 (149)
T 1u6l_A           82 -CSISLNVDSKAEAERLFNALA-EGGSVQMPLGPTFWAA-SFGMFTDRFGVAWMVNCEQD  138 (149)
T ss_dssp             -EEEEEECSSHHHHHHHHHHHH-TTSEEEEEEEEETTEE-EEEEEECTTSCEEEEEESCC
T ss_pred             -eEEEEEcCCHHHHHHHHHHHH-CCCEEeecccccCccc-ceEEEECCCCCEEEEEEecc
Confidence             689999998   789999985 8999999999989863 88999999999999998543

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.52  E-value=3.3e-13  Score=96.33  Aligned_cols=115  Identities=17%  Similarity=0.089  Sum_probs=79.8

Q ss_pred             EEeeec--ChhhhHHHHHHhc-CCeeeeeccCc------CccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEE
Q 024779          134 VMLRVG--DLDRSINFYEQAF-GMELLRKRDNP------EYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIA  204 (262)
Q Consensus       134 v~l~v~--d~~~~~~FY~~~l-G~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~  204 (262)
                      ..|.+.  |++++++||+++| |+++.......      ++......+..+    ...+.+...... +.........++
T Consensus         9 ~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~----g~~~~~~~~~~~-~~~~~~~~~~l~   83 (136)
T 1u7i_A            9 PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLG----DQSVHCIDSHVR-HAFDFTPAFSFF   83 (136)
T ss_dssp             EEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEET----TEEEEEEEESSC-CSCCCCTTEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEEC----CEEEEEECCCCC-CCCCCCCceEEE
Confidence            667887  9999999999999 99987532211      112222223322    122323222100 111123446899


Q ss_pred             EEecC---HHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecc
Q 024779          205 IGTDD---VYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNV  255 (262)
Q Consensus       205 ~~v~d---l~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  255 (262)
                      |.|+|   +++++++|+ +|++++.+|.+.++|. +.++++||+|+.|+|....
T Consensus        84 ~~v~d~~evd~~~~~l~-~Gg~v~~p~~~~~~G~-~~~~~~Dp~G~~w~l~~~~  135 (136)
T 1u7i_A           84 VDCESNAQIERLAEALS-DGGKALMPLGDYGFSQ-RFAWLADRFGVSWQLNLAG  135 (136)
T ss_dssp             EECCCHHHHHHHHHHHH-TTSEEEEEEECCSSSS-EEEEEECTTSCEEEEEECC
T ss_pred             EEcCCHHHHHHHHHHHH-cCCEEecccccCCCcc-eEEEEECCCCCEEEEEecC
Confidence            99999   999999999 9999999999999864 8899999999999998754

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.52  E-value=9.7e-13  Score=95.35  Aligned_cols=122  Identities=16%  Similarity=0.148  Sum_probs=80.1

Q ss_pred             eEEEEeC-CHHHHHHHHHhhcCcEEEEEecCCC------------CcceeeEeeecCCCceeEEEeeecCCCCCCCCCCC
Q 024779            3 HVVYRVG-DLDRTIKFYTECLGMKLLRKRDIPE------------EKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTG   69 (262)
Q Consensus         3 hv~l~v~-d~~~a~~fY~~~lG~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   69 (262)
                      +..|.|+ |+++|++||+++||+++.......+            +....+.+.++.  .  .+.+....+........|
T Consensus         6 ~p~L~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~--~--~l~~~d~~~~~~~~~~~g   81 (149)
T 1u6l_A            6 VPYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGS--F--ALMASDNHPAYPYEGIKG   81 (149)
T ss_dssp             EEEEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETT--E--EEEEEECCTTSCCCCCCS
T ss_pred             EEEEEECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEECC--E--EEEEEcCCCccCCCCCCc
Confidence            3578888 9999999999999999876422111            222233344433  2  222222211101112234


Q ss_pred             ceeEEEEeCC---HHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCCCCCCc
Q 024779           70 FGHFGIAVDD---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPL  131 (262)
Q Consensus        70 ~~~i~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~~~~~~  131 (262)
                       .+++|.|+|   +++++++|. .|+++..++.+.++ +.+.+++.||+|+.|+|.+.....++-
T Consensus        82 -~~l~~~v~d~~evd~~~~~l~-~Gg~i~~p~~~~~w-G~r~~~v~Dp~G~~w~l~~~~~~~~~~  143 (149)
T 1u6l_A           82 -CSISLNVDSKAEAERLFNALA-EGGSVQMPLGPTFW-AASFGMFTDRFGVAWMVNCEQDREGGS  143 (149)
T ss_dssp             -EEEEEECSSHHHHHHHHHHHH-TTSEEEEEEEEETT-EEEEEEEECTTSCEEEEEESCC-----
T ss_pred             -eEEEEEcCCHHHHHHHHHHHH-CCCEEeecccccCc-ccceEEEECCCCCEEEEEEecccCCCc
Confidence             479999998   789999974 89999989888876 567788999999999999876655543

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.46  E-value=4.4e-12  Score=90.41  Aligned_cols=114  Identities=14%  Similarity=0.214  Sum_probs=77.8

Q ss_pred             EEEEeC--CHHHHHHHHHhhc-CcEEEEEecCCC------CcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEE
Q 024779            4 VVYRVG--DLDRTIKFYTECL-GMKLLRKRDIPE------EKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFG   74 (262)
Q Consensus         4 v~l~v~--d~~~a~~fY~~~l-G~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~   74 (262)
                      ..|.++  |+++|++||+++| |+++.......+      +....+.+.+++.  .  +.+......+....+.+ ..++
T Consensus         9 ~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~--~--~~~~~~~~~~~~~~~~~-~~l~   83 (136)
T 1u7i_A            9 PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQ--S--VHCIDSHVRHAFDFTPA-FSFF   83 (136)
T ss_dssp             EEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTE--E--EEEEEESSCCSCCCCTT-EEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEECCE--E--EEEECCCCCCCCCCCCc-eEEE
Confidence            457776  9999999999999 999875311111      2223344554432  2  22222110111111223 3689


Q ss_pred             EEeCC---HHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEc
Q 024779           75 IAVDD---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  124 (262)
Q Consensus        75 ~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  124 (262)
                      |.|+|   +++++++|. +|+++..++.+.++ +.+.+++.||+|+.|+|..+
T Consensus        84 ~~v~d~~evd~~~~~l~-~Gg~v~~p~~~~~~-G~~~~~~~Dp~G~~w~l~~~  134 (136)
T 1u7i_A           84 VDCESNAQIERLAEALS-DGGKALMPLGDYGF-SQRFAWLADRFGVSWQLNLA  134 (136)
T ss_dssp             EECCCHHHHHHHHHHHH-TTSEEEEEEECCSS-SSEEEEEECTTSCEEEEEEC
T ss_pred             EEcCCHHHHHHHHHHHH-cCCEEecccccCCC-cceEEEEECCCCCEEEEEec
Confidence            99999   999999999 99999999988887 45778899999999999874

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.45  E-value=7.3e-13  Score=110.71  Aligned_cols=126  Identities=17%  Similarity=0.225  Sum_probs=92.5

Q ss_pred             CCCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCc--cceeeeeccCCCCcceEEEEeeecCCcc----------cc
Q 024779          128 PEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEY--KYTIAMMGYGPEDKNVVLELTYNYGVTD----------YD  195 (262)
Q Consensus       128 ~~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~----------~~  195 (262)
                      ..+++||.+.|+|++++++||+++|||++.........  ......+..    +...+.|.....+..          ..
T Consensus        20 i~~i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~----g~~~l~l~~~~~~~~~~~~~~~~~~~~   95 (381)
T 1t47_A           20 VKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTN----GSARFVLTSVIKPATPWGHFLADHVAE   95 (381)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEE----TTEEEEEEEESSCCSHHHHHHHHHHHH
T ss_pred             CceEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEec----CCEEEEEecCCCCCCcchhHHHHHHHh
Confidence            46899999999999999999999999999875322111  123344442    235677765422111          12


Q ss_pred             cCCceeEEEEEecCHHHHHHHHHHhCCeeecCCccCC--CCcceEEEEeCCCCcEEEEEecccc
Q 024779          196 KGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLP--GINTKITACLDPDGWKTVFVDNVDF  257 (262)
Q Consensus       196 ~~~~~~~i~~~v~dl~~~~~~l~~~g~~~~~~~~~~~--~~~~~~~~~~DP~G~~ie~~~~~~~  257 (262)
                      +++++.|++|.|+|+++++++++++|+++..+|....  .+..+++.++||+|+.++|+++..+
T Consensus        96 ~g~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~~~~  159 (381)
T 1t47_A           96 HGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTGY  159 (381)
T ss_dssp             HCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEEE
T ss_pred             cCCceEEEEEEECCHHHHHHHHHHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEecCCC
Confidence            3679999999999999999999999999998875432  2223578899999999999997543

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.44  E-value=1.2e-12  Score=108.60  Aligned_cols=122  Identities=16%  Similarity=0.141  Sum_probs=90.8

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcc------cccCCceeE
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD------YDKGNAYAQ  202 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~------~~~~~~~~~  202 (262)
                      .+++||.+.|+|++++.+||+++|||++.......++  ....+..    +...+.+.....+..      ..+++++.|
T Consensus         4 ~~l~hv~~~v~D~~~a~~fy~~~LGf~~~~~~~~~~g--~~~~~~~----g~~~l~l~~~~~~~~~~~~~~~~~g~g~~~   77 (357)
T 2r5v_A            4 FEIDYVEMYVENLEVAAFSWVDKYAFAVAGTSRSADH--RSIALRQ----GQVTLVLTEPTSDRHPAAAYLQTHGDGVAD   77 (357)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTE--EEEEEEE----TTEEEEEEEESSTTSHHHHHHHHHSSEEEE
T ss_pred             ceEEEEEEEECCHHHHHHHHHHcCCCeEEEEEcCCCc--eEEEEEe----CCEEEEEeCCCCCCCHHHHHHHhcCCeEEE
Confidence            4689999999999999999999999999876532222  2233332    235566664222111      224679999


Q ss_pred             EEEEecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          203 IAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       203 i~~~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                      ++|.|+|+++++++++++|+++..+|.....|..+++.++||+|..++|+++..
T Consensus        78 iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~~p~g~~~~lv~~~~  131 (357)
T 2r5v_A           78 IAMATSDVAAAYEAAVRAGAEAVRAPGQHSEAAVTTATIGGFGDVVHTLIQRDG  131 (357)
T ss_dssp             EEEEESCHHHHHHHHHHTTCCEEEEEECCC-CCCCEEEEECSTTCEEEEEECCS
T ss_pred             EEEEECCHHHHHHHHHHcCCeEeECcEecCCCeEEEEEEeccCCeEEEEEeccc
Confidence            999999999999999999999998775433344468899999999999998753

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.43  E-value=4.8e-12  Score=102.24  Aligned_cols=114  Identities=13%  Similarity=0.025  Sum_probs=78.9

Q ss_pred             eEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeC-CHH
Q 024779            3 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD-DVA   81 (262)
Q Consensus         3 hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~-d~~   81 (262)
                      ++.+.|+|+++|++||+++|||++......+ +  ....+..+.......+.+...    +...+....+++|.|+ |++
T Consensus       186 ~~~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~v~~dvd  258 (301)
T 2zw5_A          186 ITELPVRDVAATLRLVEAALGARTAFAIGDP-P--EFAEAALTPWSAGPRFRLAAV----PGPGPVEPVRLHLDAAGTAD  258 (301)
T ss_dssp             EEEEEESCHHHHHHHHHHHSCCEEEEEEETT-E--EEEEEESSSSSSSSEEEEEEC----CCSSCCCCCEEEEEEESCHH
T ss_pred             EEEEEeCCHHHHHHHHHHhcCCeEeeecCCC-c--cEEEEEcCCCccccccccccC----CCcCCCCceEEEEEcCccHH
Confidence            6788999999999999999999987543211 1  122444443111111222111    0011122346899999 999


Q ss_pred             HHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEc
Q 024779           82 KTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  124 (262)
Q Consensus        82 ~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  124 (262)
                      +++++++++|+++..+|...++ +.+.++|.|||||.|+|.++
T Consensus       259 ~~~~~~~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          259 SLHRRAVDAGARVDGPPVRRPW-GRSEFVITLPEGHELTVSAP  300 (301)
T ss_dssp             HHHHHHHHTTCCEEEEEEECTT-SCEEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHHcCCccccCcccCCC-cceEEEEECCCCCEEEeeCC
Confidence            9999999999999888777665 45778899999999999875

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.39  E-value=1.7e-12  Score=109.50  Aligned_cols=123  Identities=14%  Similarity=0.088  Sum_probs=91.5

Q ss_pred             CceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCc--cceeeeeccCCCCcceEEEEeeecCCc---------------
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEY--KYTIAMMGYGPEDKNVVLELTYNYGVT---------------  192 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~---------------  192 (262)
                      +++||.|.|+|++++++||+++|||++......+.+  .+....+..    +...+.|.....+.               
T Consensus        25 ~i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~----g~~~l~L~~~~~~~~~~~~~~~~~~~p~~  100 (424)
T 1sqd_A           25 RFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTS----GDLRFLFTAPYSPSLSAGEIKPTTTASIP  100 (424)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEE----TTEEEEEEEECCGGGTTTCCGGGCCCSST
T ss_pred             eEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcC----CCEEEEEecCCCCcccccccccccccccc
Confidence            689999999999999999999999998866432221  223333332    24566666542221               


Q ss_pred             ----c------cccCCceeEEEEEecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecccc
Q 024779          193 ----D------YDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDF  257 (262)
Q Consensus       193 ----~------~~~~~~~~~i~~~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~  257 (262)
                          .      ..+++++.|++|.|+|+++++++++++|+++..+|....+ ..+...+++|.|+.++|+++..+
T Consensus       101 ~~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l~a~Ga~~~~~P~~~~~-~~~~~~i~~~Gg~~~~lvd~~g~  174 (424)
T 1sqd_A          101 SFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNE-AVTIAEVKLYGDVVLRYVSYKAE  174 (424)
T ss_dssp             TCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT-TEEEEEEEEETTEEEEEEEECCC
T ss_pred             cccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCcCCCC-ceEEEEEEcCCCcEEEEEecCCC
Confidence                0      1235789999999999999999999999999988865533 24677888999999999987654

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.38  E-value=2e-12  Score=107.51  Aligned_cols=126  Identities=17%  Similarity=0.231  Sum_probs=94.5

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccc--eeeeeccCCCCcceEEEEeeecCCc--c-----cccCCc
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKY--TIAMMGYGPEDKNVVLELTYNYGVT--D-----YDKGNA  199 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~--~-----~~~~~~  199 (262)
                      .+++||.+.|+|++++..||+++|||++......+.+..  ....+..    +...+.|.....+.  +     ..++++
T Consensus        10 ~~i~Hv~i~V~d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~----G~i~~~L~~p~~p~s~~~a~fl~~hG~G   85 (393)
T 3isq_A           10 LHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQ----GKIVFVLSSALNPWNKEMGDHLVKHGDG   85 (393)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEE----TTEEEEEEEESSTTCHHHHHHHHHHCSE
T ss_pred             ceEeEEEEEECCHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEEEEec----CCEEEEEecCCCCCchHHHHHHHhcCCc
Confidence            378999999999999999999999999987644332221  1233332    24566676532221  1     124789


Q ss_pred             eeEEEEEecCHHHHHHHHHHhCCeeecCCccCCC--CcceEEEEeCCCCcEEEEEeccccc
Q 024779          200 YAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPG--INTKITACLDPDGWKTVFVDNVDFL  258 (262)
Q Consensus       200 ~~~i~~~v~dl~~~~~~l~~~g~~~~~~~~~~~~--~~~~~~~~~DP~G~~ie~~~~~~~~  258 (262)
                      +.|++|.|+|+++++++++++|++++.+|...+.  |..+++.+++|.|..+.|+++..+.
T Consensus        86 v~~iAf~VdDvdaa~~ra~a~Ga~~v~eP~~~~~~~G~v~~a~I~~~Gd~~h~lVdr~~y~  146 (393)
T 3isq_A           86 VKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLVEKMNYI  146 (393)
T ss_dssp             EEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESCC
T ss_pred             EEEEEEEeCCHHHHHHHHHHCCCeEecCccccccCCceeEEEEEEeCCCcEEEEeccccCc
Confidence            9999999999999999999999999999866543  3346788999999999999976543

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=99.30  E-value=3.9e-11  Score=85.58  Aligned_cols=111  Identities=11%  Similarity=0.109  Sum_probs=72.9

Q ss_pred             Eeee-cChhhhHHHHHHhc-CCeeeeeccCcC------ccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEE
Q 024779          135 MLRV-GDLDRSINFYEQAF-GMELLRKRDNPE------YKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIG  206 (262)
Q Consensus       135 ~l~v-~d~~~~~~FY~~~l-G~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~  206 (262)
                      .|.+ .|.+++++||+++| |+++.......+      +......+..+    ...+-+....   +. .+.. ..+++.
T Consensus         9 ~l~~~~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~----~~~~m~~d~~---~~-~~~~-~sl~~~   79 (139)
T 1tsj_A            9 FLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLN----GQVFMAIDAN---SG-TELP-ISLFVT   79 (139)
T ss_dssp             EEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEET----TEEEEEEC-----------C-CCEEEE
T ss_pred             EEEECCCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEEC----CEEEEEECCC---CC-CCce-EEEEEE
Confidence            3444 49999999999999 999875322211      12222223322    1122222111   11 1112 578888


Q ss_pred             ecC---HHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          207 TDD---VYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       207 v~d---l~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                      |+|   +++++++|. +|++++.++.+.++|. +..+++||+|+.|+|.....
T Consensus        80 ~~d~~evd~~~~~l~-~G~~v~~p~~~~~wG~-~~g~v~Dp~G~~W~i~~~~~  130 (139)
T 1tsj_A           80 VKDTIEMERLFNGLK-DEGAILMPKTNMPPYR-EFAWVQDKFGVSFQLALPEE  130 (139)
T ss_dssp             CSSHHHHHHHHHHHH-TTCEEEEEEEEETTEE-EEEEEECTTSCEEEEEECC-
T ss_pred             CCCHHHHHHHHHHHh-CCCEEeecccccCCCc-eEEEEECCCCCEEEEeeccc
Confidence            876   788899998 7999999999999974 89999999999999998543

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.30  E-value=1.9e-11  Score=102.93  Aligned_cols=124  Identities=15%  Similarity=0.081  Sum_probs=91.2

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCc--cceeeeeccCCCCcceEEEEeeecCCc-------------c
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEY--KYTIAMMGYGPEDKNVVLELTYNYGVT-------------D  193 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~-------------~  193 (262)
                      .+++||.+.|+|++++.+||++.|||++......+.+  .....++..    +...+.|.......             .
T Consensus        30 ~~l~hV~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~----G~~~l~L~~~~~~~~~~~~~p~~~~~~~  105 (418)
T 1sp8_A           30 LAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRS----GSLSFLFTAPYAHGADAATAALPSFSAA  105 (418)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEE----TTEEEEEEEECCSSCCGGGCSSTTCCHH
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEee----CCEEEEEecCCCCcccccccccccccch
Confidence            4789999999999999999999999999876433221  234444443    23567776543220             0


Q ss_pred             ------cccCCceeEEEEEecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecccc
Q 024779          194 ------YDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDF  257 (262)
Q Consensus       194 ------~~~~~~~~~i~~~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~  257 (262)
                            ..+++++.||+|.|+|+++++++++++|+++...|....+. .++..+++|.|..+.|+++...
T Consensus       106 ~~~~~~~~hg~gv~~iAf~V~Dv~~a~~~l~~~Ga~~~~~p~~~~~~-~~~~~i~~~Gg~~~~lvd~~~~  174 (418)
T 1sp8_A          106 AARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRG-FRLAEVELYGDVVLRYVSYPDG  174 (418)
T ss_dssp             HHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETT-EEEEEEEEETTEEEEEEECCTT
T ss_pred             hHHHHHhhcCCeeEEEEEEeCCHHHHHHHHHHCCCEEEeccccccCc-eEEEEEecCCCEEEEEEccCCC
Confidence                  12457999999999999999999999999999887543221 3566778888998988887643

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=99.29  E-value=6.6e-11  Score=84.17  Aligned_cols=114  Identities=13%  Similarity=0.112  Sum_probs=77.5

Q ss_pred             EEeeec-ChhhhHHHHHHhcC-CeeeeeccC------cCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEE
Q 024779          134 VMLRVG-DLDRSINFYEQAFG-MELLRKRDN------PEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAI  205 (262)
Q Consensus       134 v~l~v~-d~~~~~~FY~~~lG-~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~  205 (262)
                      -.|.+. |.+++++||+++|| .++......      +++......+..+    +..+.+....+......+ ....++|
T Consensus        13 P~L~f~g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~----g~~lm~~d~~~~~~~~~~-~~~~l~l   87 (138)
T 3oms_A           13 TFLMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLN----GQEFMCIDSYVNHNFTFT-PAMSLYV   87 (138)
T ss_dssp             EEEEESSCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEET----TEEEEEEECSSCCSCCCC-TTSCEEE
T ss_pred             EEEEECCCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEEC----CEEEEEEcCCCCCCCCCC-CCEEEEE
Confidence            456777 89999999999999 566543221      1222233334432    233434332211111222 3467899


Q ss_pred             EecC---HHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEec
Q 024779          206 GTDD---VYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDN  254 (262)
Q Consensus       206 ~v~d---l~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  254 (262)
                      .|+|   +++++++|. +|++++.+|.+.++|. +..+++||+|+.|.|.-.
T Consensus        88 ~~~d~~evd~~~~~l~-~Gg~v~~p~~~~~wg~-~~~~~~Dp~G~~W~i~~~  137 (138)
T 3oms_A           88 TCETEEEIDTVFHKLA-QDGAILMPLGSYPFSK-KFGWLNDKYGVSWQLTLA  137 (138)
T ss_dssp             EESSHHHHHHHHHHHH-TTCEEEEEEEEETTEE-EEEEEECTTSCEEEEEEC
T ss_pred             EcCCHHHHHHHHHHHH-cCCeEecCcccccCCc-EEEEEECCCCCEEEEEeC
Confidence            9999   999999995 6899999999999964 789999999999999753

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=99.29  E-value=6.6e-11  Score=86.91  Aligned_cols=115  Identities=15%  Similarity=0.084  Sum_probs=79.1

Q ss_pred             EEeeecChhhhHHHHHHhcCCeeeeeccCc--------------CccceeeeeccCCCCcceEEEEeeecCCcccccCCc
Q 024779          134 VMLRVGDLDRSINFYEQAFGMELLRKRDNP--------------EYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNA  199 (262)
Q Consensus       134 v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  199 (262)
                      -.|.+.|.+++++||+++||+++.......              ++....+.+..+    +..+-+....+ .+...++ 
T Consensus        29 PyL~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~----g~~lm~~D~~g-~~~~~~~-  102 (172)
T 3l20_A           29 PYIAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVL----GVKVLCSDSFG-RADKINN-  102 (172)
T ss_dssp             EEEEESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEET----TEEEEEEECTT-CCCCCCS-
T ss_pred             EEEEECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEEC----CEEEEEECCCC-CCCCCCC-
Confidence            466777999999999999999976553321              122223333332    23444443221 1122222 


Q ss_pred             eeEEEEEe--------cCHHHHHHHHHHhC-CeeecCCccCCCCcceEEEEeCCCCcEEEEEecc
Q 024779          200 YAQIAIGT--------DDVYKTAEAIKLFG-GKVTREPGPLPGINTKITACLDPDGWKTVFVDNV  255 (262)
Q Consensus       200 ~~~i~~~v--------~dl~~~~~~l~~~g-~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  255 (262)
                      ...+++.+        +|+++++++|.+.| ++++.+|.+.++|. +.++++||+|+.|+|...+
T Consensus       103 ~~sl~l~~~~~d~~~~~dvd~~~~~l~~~G~a~v~~p~~~~~wG~-r~g~v~DpfG~~W~i~~~~  166 (172)
T 3l20_A          103 GISLLIDYDVNNKEDADKVEAFYEQIKDHSSIEIELPFADQFWGG-KMGVFTDKYGVRWMLHGQD  166 (172)
T ss_dssp             SEEEEEEEETTCHHHHHHHHHHHHHHTTCTTCEEEEEEEECTTSS-EEEEEECTTSCEEEEEEEC
T ss_pred             cEEEEEEEccCccCcHHHHHHHHHHHHhCCCceEecCccccCCCc-EEEEEECCCCCEEEEEeCC
Confidence            24556665        58999999999999 79999999999875 7889999999999998754

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=99.26  E-value=3e-10  Score=80.74  Aligned_cols=113  Identities=10%  Similarity=0.174  Sum_probs=78.2

Q ss_pred             EEEEeC-CHHHHHHHHHhhcC-cEEEEEecC------CCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEE
Q 024779            4 VVYRVG-DLDRTIKFYTECLG-MKLLRKRDI------PEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGI   75 (262)
Q Consensus         4 v~l~v~-d~~~a~~fY~~~lG-~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~   75 (262)
                      ..|.++ |.++|++||+++|| .++......      ..+...++.+.+++.    .+.+...........+.+ ..+++
T Consensus        13 P~L~f~g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~g~----~lm~~d~~~~~~~~~~~~-~~l~l   87 (138)
T 3oms_A           13 TFLMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLNGQ----EFMCIDSYVNHNFTFTPA-MSLYV   87 (138)
T ss_dssp             EEEEESSCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEETTE----EEEEEECSSCCSCCCCTT-SCEEE
T ss_pred             EEEEECCCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEECCE----EEEEEcCCCCCCCCCCCC-EEEEE
Confidence            356777 89999999999999 566532111      234455677776542    233332222112222333 35899


Q ss_pred             EeCC---HHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEE
Q 024779           76 AVDD---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  123 (262)
Q Consensus        76 ~v~d---~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~  123 (262)
                      .|+|   +++++++|. .|.++..++.+.++ +.+...+.||+|+.|.|..
T Consensus        88 ~~~d~~evd~~~~~l~-~Gg~v~~p~~~~~w-g~~~~~~~Dp~G~~W~i~~  136 (138)
T 3oms_A           88 TCETEEEIDTVFHKLA-QDGAILMPLGSYPF-SKKFGWLNDKYGVSWQLTL  136 (138)
T ss_dssp             EESSHHHHHHHHHHHH-TTCEEEEEEEEETT-EEEEEEEECTTSCEEEEEE
T ss_pred             EcCCHHHHHHHHHHHH-cCCeEecCcccccC-CcEEEEEECCCCCEEEEEe
Confidence            9999   999999985 68899999988887 5678889999999999874

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=99.25  E-value=2.2e-10  Score=81.69  Aligned_cols=110  Identities=11%  Similarity=0.143  Sum_probs=74.7

Q ss_pred             EEEeC-CHHHHHHHHHhhc-CcEEEEEecCC------CCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEE
Q 024779            5 VYRVG-DLDRTIKFYTECL-GMKLLRKRDIP------EEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIA   76 (262)
Q Consensus         5 ~l~v~-d~~~a~~fY~~~l-G~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~   76 (262)
                      .|.+. |.++|++||+++| |+++.......      .+....+.+.+++.  .  +..... .+ ...  .. ..+++.
T Consensus         9 ~l~~~~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~~~--~--~m~~d~-~~-~~~--~~-~sl~~~   79 (139)
T 1tsj_A            9 FLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQ--V--FMAIDA-NS-GTE--LP-ISLFVT   79 (139)
T ss_dssp             EEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTE--E--EEEEC-----------C-CCEEEE
T ss_pred             EEEECCCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEECCE--E--EEEECC-CC-CCC--ce-EEEEEE
Confidence            34554 9999999999999 99987532211      13344455555432  1  122211 11 111  11 468999


Q ss_pred             eCC---HHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcC
Q 024779           77 VDD---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        77 v~d---~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                      |+|   +++++++|. .|+++..++.+.++ +.+..++.||+|+.|+|....
T Consensus        80 ~~d~~evd~~~~~l~-~G~~v~~p~~~~~w-G~~~g~v~Dp~G~~W~i~~~~  129 (139)
T 1tsj_A           80 VKDTIEMERLFNGLK-DEGAILMPKTNMPP-YREFAWVQDKFGVSFQLALPE  129 (139)
T ss_dssp             CSSHHHHHHHHHHHH-TTCEEEEEEEEETT-EEEEEEEECTTSCEEEEEECC
T ss_pred             CCCHHHHHHHHHHHh-CCCEEeecccccCC-CceEEEEECCCCCEEEEeecc
Confidence            987   778899988 79999999988887 678899999999999999753

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=99.24  E-value=2.9e-10  Score=83.51  Aligned_cols=114  Identities=15%  Similarity=0.169  Sum_probs=79.7

Q ss_pred             EEEeCCHHHHHHHHHhhcCcEEEEEecCC--------------CCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCc
Q 024779            5 VYRVGDLDRTIKFYTECLGMKLLRKRDIP--------------EEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGF   70 (262)
Q Consensus         5 ~l~v~d~~~a~~fY~~~lG~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   70 (262)
                      .|.++|.++|++||+++||+++.......              .+....+.+.+++.    .+.+....+ .....+.++
T Consensus        30 yL~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~g~----~lm~~D~~g-~~~~~~~~~  104 (172)
T 3l20_A           30 YIAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVLGV----KVLCSDSFG-RADKINNGI  104 (172)
T ss_dssp             EEEESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEETTE----EEEEEECTT-CCCCCCSSE
T ss_pred             EEEECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEECCE----EEEEECCCC-CCCCCCCcE
Confidence            56788999999999999999977553221              23445666766542    233333211 122223333


Q ss_pred             eeEEEEe--------CCHHHHHHHHHHcC-CeeecCCcccCCCCeEEEEEECCCCCEEEEEEcC
Q 024779           71 GHFGIAV--------DDVAKTVELIKAKG-GKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        71 ~~i~~~v--------~d~~~~~~~l~~~G-~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                       .+++.+        +|+++++++|.+.| +++..++.+.++ +.+...+.||+|+.|+|....
T Consensus       105 -sl~l~~~~~d~~~~~dvd~~~~~l~~~G~a~v~~p~~~~~w-G~r~g~v~DpfG~~W~i~~~~  166 (172)
T 3l20_A          105 -SLLIDYDVNNKEDADKVEAFYEQIKDHSSIEIELPFADQFW-GGKMGVFTDKYGVRWMLHGQD  166 (172)
T ss_dssp             -EEEEEEETTCHHHHHHHHHHHHHHTTCTTCEEEEEEEECTT-SSEEEEEECTTSCEEEEEEEC
T ss_pred             -EEEEEEccCccCcHHHHHHHHHHHHhCCCceEecCccccCC-CcEEEEEECCCCCEEEEEeCC
Confidence             366666        57899999999999 799999888887 556788999999999998643

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.20  E-value=6.7e-11  Score=98.01  Aligned_cols=122  Identities=19%  Similarity=0.201  Sum_probs=80.0

Q ss_pred             CceEEEEeC--CHHHHHHHHHhhcCcEEEEEecCCCC--cceeeEeeecCCCceeEEEeeec-CCC-CC------CCCCC
Q 024779            1 MLHVVYRVG--DLDRTIKFYTECLGMKLLRKRDIPEE--KYTNAFLGYGPEDSHFVIELTYN-YGV-DK------YDIGT   68 (262)
Q Consensus         1 l~hv~l~v~--d~~~a~~fY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~-~~~-~~------~~~~~   68 (262)
                      |+||++.|+  |++++.+||+++|||++.......+.  ......+.....  ...+++..+ ... .+      ...+.
T Consensus       159 idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~~~g--~~~i~L~~~~~~~~~~~~~~~~~~~g~  236 (357)
T 1cjx_A          159 IDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDG--MIRIPLNEESSKGAGQIEEFLMQFNGE  236 (357)
T ss_dssp             EEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTS--SCEEEEEEECTTCCSHHHHHHHHHTSS
T ss_pred             ECceEEeechhhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEECCCC--CEEEEEeeecCCCCChHHHhHHhcCCC
Confidence            579999999  99999999999999999876532221  111122222222  234566554 211 11      11456


Q ss_pred             CceeEEEEeCCHHHHHHHHHHcCCeeec-CCccc---------CCCC-------eEEEEEEC----CCCCEEEEEEc
Q 024779           69 GFGHFGIAVDDVAKTVELIKAKGGKVTR-EPGPV---------KGGN-------TVIAFIED----PDGYKFELLER  124 (262)
Q Consensus        69 ~~~~i~~~v~d~~~~~~~l~~~G~~~~~-~~~~~---------~~~~-------~~~~~~~D----P~G~~iel~~~  124 (262)
                      |++||||.|+|+++++++|+++|++++. .|...         ..+.       ...++-.|    |+|+++++++.
T Consensus       237 g~~HiAf~v~Di~~~~~~L~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~~il~d~d~~~~~~g~llqift~  313 (357)
T 1cjx_A          237 GIQHVAFLTDDLVKTWDALKKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQARGILLDGSSVEGDKRLLLQIFSE  313 (357)
T ss_dssp             BCCEEEEEESCHHHHHHHHHHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHHTCEEEEEEETTEEEEEEEEEBC
T ss_pred             CeeEEEEEcCCHHHHHHHHHHcCCcccCCCChHHHHHHHHHhccccccHHHHHHcCeEEecCCCCCCCCeEEEEecc
Confidence            8999999999999999999999999876 55111         1111       01355577    78888888854

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=99.06  E-value=3e-09  Score=81.18  Aligned_cols=113  Identities=12%  Similarity=0.087  Sum_probs=74.4

Q ss_pred             eeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEE---EEEec
Q 024779          132 CQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQI---AIGTD  208 (262)
Q Consensus       132 ~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i---~~~v~  208 (262)
                      ...+|.|.|.+++.+||+++|||++.....      ....++..  .....+.|-+. +........|..|+   ++.|.
T Consensus        12 ~~p~LrV~nr~~~~~FY~~vlG~kll~ee~------~~a~lg~~--~~~~~L~lEEs-p~~~~~~~~Glkh~a~i~i~vp   82 (244)
T 3e0r_A           12 IIPTLKANNRKLNETFYIETLGMKALLEES------AFLSLGDQ--TGLEKLVLEEA-PSMRTRKVEGRKKLARLIVKVE   82 (244)
T ss_dssp             EEEEEEESSHHHHHHHHTTTTCCEEEEECS------SEEEEECT--TCCEEEEEEEC-CTTTCBCCCSSCSEEEEEEEES
T ss_pred             EeeEEEECCHHHHHHHHHhccCcEEeeccC------cEEEeecC--CCcceEEEEeC-CCcccccccccceeeeEEEEcC
Confidence            457899999999999999999999887643      34555542  23334444332 22222334566777   59999


Q ss_pred             CHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecccc
Q 024779          209 DVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDF  257 (262)
Q Consensus       209 dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~  257 (262)
                      +-.++-.-|.. +.++... ..-..  ++.+|+.||+||.||++...+.
T Consensus        83 ~~~el~~lL~~-~~~~~~~-~~gdh--gyA~yl~dPEGn~ieiyae~d~  127 (244)
T 3e0r_A           83 NPLEIEGILSK-TDSIHRL-YKGQN--GYAFEIFSPEDDLILIHAEDDI  127 (244)
T ss_dssp             SHHHHHHHHTT-CSCCSEE-EECSS--SEEEEEECTTCCEEEEECCSCG
T ss_pred             CHHHHHHHHhc-ccccccc-cccCC--cEEEEEECCCCCeEEEEEcCCH
Confidence            87776666655 5554321 11112  4579999999999999997764

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=98.63  E-value=1.3e-06  Score=68.88  Aligned_cols=148  Identities=13%  Similarity=0.160  Sum_probs=97.8

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcC-----cEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCC-----------C--
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLG-----MKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGV-----------D--   62 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----------~--   62 (262)
                      |+|+.+.|++++        .||     |++......+..+..+..+.++..    +||+....+.           .  
T Consensus        25 lDHlVi~v~~l~--------~lG~~~~~f~~~~GG~H~~~GT~N~Li~fdg~----YLElIai~~~~~~~~~~~~~~~~~   92 (274)
T 3p8a_A           25 FDHIIHYIDQLD--------RFSFPGDVIKLHSGGYHHKYGTFNKLGYINEN----YIELLDVENNEKLKKMAKTIEGGV   92 (274)
T ss_dssp             EEEEEEECTTGG--------GCCCGGGSSCCEEEEEETTTTEEEEEEECSSS----EEEEEEESCHHHHHHHTTSTGGGT
T ss_pred             CCEEEEEeccHH--------HcCCccceEEeCCCccCCCCCCEEEEEeeCCE----EEEEEeecCcccccccccccCccc
Confidence            689999999884        467     988776655556667777777432    6676653221           1  


Q ss_pred             CC-------CCCCCceeEEEEeCCHHHHHHHHHHcCCeeecCC---cccCCCC---eEEEEEECCC--CCEE-EEEEcC-
Q 024779           63 KY-------DIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREP---GPVKGGN---TVIAFIEDPD--GYKF-ELLERG-  125 (262)
Q Consensus        63 ~~-------~~~~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~---~~~~~~~---~~~~~~~DP~--G~~i-el~~~~-  125 (262)
                      ..       ..+.|+.++++.++|+++..+++.++|+.+..+.   ...++|.   -+.++..|+.  +..+ -|++.. 
T Consensus        93 ~f~~~~~~~~~geGl~~~alrt~Di~a~~a~l~~~Gl~~~~p~~~sR~~pDG~~l~W~l~~~~d~~~~~~~~PFfiqw~~  172 (274)
T 3p8a_A           93 AFATQIVQEKYEQGFKNICLHTNDIEAVKNKLQSEQVEVVGPIQMERDTHKDGKVKWQLLYIMNQDDDEIKPPFFIQWEE  172 (274)
T ss_dssp             CTTTHHHHTTTCCEEEEEEEECSCHHHHHHHHHTTTCEEEEEEEEEECCCC--CEEEEEEEEECSSCCSSCCCEEEEESS
T ss_pred             hHHHHhhhhccCCCeEEEEEecCCHHHHHHHHHHcCCCcCCCccccccCCCCCEEEEEEEeccCCCccCCCccEEEecCC
Confidence            01       2456999999999999999999999998764211   1122222   1233334554  2211 233322 


Q ss_pred             C----------C---CCCceeEEeeecChhhhHHHHHHhcCCeeeeec
Q 024779          126 P----------T---PEPLCQVMLRVGDLDRSINFYEQAFGMELLRKR  160 (262)
Q Consensus       126 ~----------~---~~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~  160 (262)
                      +          .   ..+|.+|.+.++|++++++.|+++||.......
T Consensus       173 ~~~~r~~~~~~HpnGa~gI~~vvi~~~dp~~~~~~~~~l~g~~~~~~~  220 (274)
T 3p8a_A          173 SDSMRTKKLQKYFQKQFSIETVIVKSKNRSQTVSNWLKWFDMDIVEEN  220 (274)
T ss_dssp             CTTHHHHHHTTTCCTTEEEEEEEEEETTHHHHHHHHHHHHCCEEEEEC
T ss_pred             CccccccccccCCCccceEEEEEEEeCCHHHHHHHHHHHhCCCccccC
Confidence            1          1   237899999999999999999999999987553

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=98.47  E-value=2.8e-06  Score=61.60  Aligned_cols=129  Identities=15%  Similarity=0.136  Sum_probs=85.1

Q ss_pred             EEEeC-CHHHHHHHHHhhc-CcEEEEEecC-------CCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEE
Q 024779            5 VYRVG-DLDRTIKFYTECL-GMKLLRKRDI-------PEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGI   75 (262)
Q Consensus         5 ~l~v~-d~~~a~~fY~~~l-G~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~   75 (262)
                      .|..+ |.++|.+||+++| |.++......       +.+...++.+.+++.    .+......  +......++ .+.+
T Consensus        10 yL~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~g~----~~m~~d~~--p~~~~~~~~-sl~v   82 (163)
T 1u69_A           10 CLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGI----PCLGLNGG--PAFRHSEAF-SFQV   82 (163)
T ss_dssp             EEEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTE----EEEEEECC--TTCCCCTTE-EEEE
T ss_pred             EEEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEECCE----EEEEECCC--CCcCCCCce-EEEE
Confidence            46677 9999999999999 9988753211       134566677777542    22233221  122222333 5888


Q ss_pred             EeCC---HHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCCCCCCceeEEeeecChhhhHHHHHHhc
Q 024779           76 AVDD---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRSINFYEQAF  152 (262)
Q Consensus        76 ~v~d---~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~~~~~~~~v~l~v~d~~~~~~FY~~~l  152 (262)
                      .++|   ++++.++|.+.|.++.      ..     ..+.||.|+.|.|....      -.--+.-+|.+++.+.++..|
T Consensus        83 ~~~d~~e~d~~~~~L~~~Gg~v~------~~-----G~v~D~fGv~W~i~~~~------~~~~~~d~d~~~~~r~~~am~  145 (163)
T 1u69_A           83 ATDDQAETDRLWNAIVDNGGEES------AC-----GWCRDKWGISWQITPRV------LSEAIASPDRAAARRAFEAMM  145 (163)
T ss_dssp             EESSHHHHHHHHHHHHHTTCEEC------ST-----TEEECTTSCEEEEEEHH------HHHHHTCSSHHHHHHHHHHHT
T ss_pred             EeCCHHHHHHHHHHHHhCCCEEE------EE-----EEEECCCCCEEEEEeEc------hHHhccCCCHHHHHHHHHHHH
Confidence            8887   6777889987888875      21     24799999999998431      000123458899999999999


Q ss_pred             CCeee
Q 024779          153 GMELL  157 (262)
Q Consensus       153 G~~~~  157 (262)
                      +|+-.
T Consensus       146 ~m~k~  150 (163)
T 1u69_A          146 TMGRI  150 (163)
T ss_dssp             TCSSC
T ss_pred             CCcce
Confidence            98653

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=98.29  E-value=1.4e-05  Score=57.92  Aligned_cols=104  Identities=18%  Similarity=0.149  Sum_probs=65.8

Q ss_pred             EEeeec-ChhhhHHHHHHhc-CCeeeeeccCc-------CccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEE
Q 024779          134 VMLRVG-DLDRSINFYEQAF-GMELLRKRDNP-------EYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIA  204 (262)
Q Consensus       134 v~l~v~-d~~~~~~FY~~~l-G~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~  204 (262)
                      ..|.+. |.+++.+||+++| |.++.......       ++......+..+    +..+-+....+  ..+..++ ..+.
T Consensus         9 PyL~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~----g~~~m~~d~~p--~~~~~~~-~sl~   81 (163)
T 1u69_A            9 ICLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVM----GIPCLGLNGGP--AFRHSEA-FSFQ   81 (163)
T ss_dssp             EEEEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEET----TEEEEEEECCT--TCCCCTT-EEEE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEEC----CEEEEEECCCC--CcCCCCc-eEEE
Confidence            456776 9999999999999 99887432211       122223333332    22333332211  1112223 4677


Q ss_pred             EEecC---HHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecc
Q 024779          205 IGTDD---VYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNV  255 (262)
Q Consensus       205 ~~v~d---l~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  255 (262)
                      +.++|   +++++++|.+.|+++.      .+     ..++||.|+.|.|..+.
T Consensus        82 v~~~d~~e~d~~~~~L~~~Gg~v~------~~-----G~v~D~fGv~W~i~~~~  124 (163)
T 1u69_A           82 VATDDQAETDRLWNAIVDNGGEES------AC-----GWCRDKWGISWQITPRV  124 (163)
T ss_dssp             EEESSHHHHHHHHHHHHHTTCEEC------ST-----TEEECTTSCEEEEEEHH
T ss_pred             EEeCCHHHHHHHHHHHHhCCCEEE------EE-----EEEECCCCCEEEEEeEc
Confidence            77876   7888999998899887      22     35999999999998754

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=97.70  E-value=9.7e-05  Score=66.99  Aligned_cols=111  Identities=20%  Similarity=0.222  Sum_probs=70.6

Q ss_pred             cChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcc------------------cccCCce
Q 024779          139 GDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD------------------YDKGNAY  200 (262)
Q Consensus       139 ~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~------------------~~~~~~~  200 (262)
                      .-++++++||++.+++.......   ...-...+.  +..+..++.+........                  .....-.
T Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dW~~~~   95 (941)
T 3opy_B           21 SLLQASIDFYTNFLGFAIRKNSN---QKLFWLQLE--EDQNNVSIQLILDPEHAASVSQIDQNIRNLTRSLYRKDWRSIQ   95 (941)
T ss_dssp             CC-HHHHHHHHHTTCCEECSSCS---CCC---EEC--CTTSCCEEEEECSSCSCHHHHHHHHHHHCCC----------CC
T ss_pred             HHHHHHHHHHHhhccceeccccC---CcceeEEEe--cCCCeEEEEEEeccccchhHHHHHHHHhhhhcccccccccccC
Confidence            47899999999999997754221   111123333  223456666554311110                  0011122


Q ss_pred             eEEEEEecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecccc
Q 024779          201 AQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDF  257 (262)
Q Consensus       201 ~~i~~~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~  257 (262)
                      .|+.|.+.|++++.+.|.+.+.++...|.....   ..+|..||+||.|+|.+.+..
T Consensus        96 ~~l~f~~~dL~~~~~~L~~~~~~~Q~~ps~~~~---~e~yt~DPlGNvIgfs~~~~~  149 (941)
T 3opy_B           96 SNIAFKSSSLSKLVKLLKDGGHPVQQSPNEISP---FEVYTVDPLGSLIGFSGFKNP  149 (941)
T ss_dssp             CEEEEEESCHHHHHHHHHTTTCCCBCSSSSCSC---EEECCSSCCEEEECC-CCSSS
T ss_pred             ceEEEEeCCHHHHHHHHHhcCCccccCCCcCCC---ceEEeECCCCCEEEEeccCCc
Confidence            399999999999999999999888766654433   578999999999999997753

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=97.39  E-value=0.00029  Score=64.00  Aligned_cols=109  Identities=20%  Similarity=0.292  Sum_probs=65.8

Q ss_pred             CCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecC--------------CCC-----CCCCCCC
Q 024779            9 GDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY--------------GVD-----KYDIGTG   69 (262)
Q Consensus         9 ~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--------------~~~-----~~~~~~~   69 (262)
                      .-++++..||+++|++.......   ......++  .+.+...++++....              ...     .-+.+..
T Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dW~~~~   95 (941)
T 3opy_B           21 SLLQASIDFYTNFLGFAIRKNSN---QKLFWLQL--EEDQNNVSIQLILDPEHAASVSQIDQNIRNLTRSLYRKDWRSIQ   95 (941)
T ss_dssp             CC-HHHHHHHHHTTCCEECSSCS---CCC---EE--CCTTSCCEEEEECSSCSCHHHHHHHHHHHCCC----------CC
T ss_pred             HHHHHHHHHHHhhccceeccccC---CcceeEEE--ecCCCeEEEEEEeccccchhHHHHHHHHhhhhcccccccccccC
Confidence            56889999999999997654221   11112233  233334455543220              000     0011111


Q ss_pred             ceeEEEEeCCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCC
Q 024779           70 FGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  126 (262)
Q Consensus        70 ~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~  126 (262)
                       .|+.|.+.|++++.+.|.+.+.++-..|.+.   +...+|+.||+||.|+|.+...
T Consensus        96 -~~l~f~~~dL~~~~~~L~~~~~~~Q~~ps~~---~~~e~yt~DPlGNvIgfs~~~~  148 (941)
T 3opy_B           96 -SNIAFKSSSLSKLVKLLKDGGHPVQQSPNEI---SPFEVYTVDPLGSLIGFSGFKN  148 (941)
T ss_dssp             -CEEEEEESCHHHHHHHHHTTTCCCBCSSSSC---SCEEECCSSCCEEEECC-CCSS
T ss_pred             -ceEEEEeCCHHHHHHHHHhcCCccccCCCcC---CCceEEeECCCCCEEEEeccCC
Confidence             2899999999999999999998775444332   3456888999999999997653

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=96.16  E-value=0.092  Score=41.25  Aligned_cols=111  Identities=12%  Similarity=0.027  Sum_probs=65.7

Q ss_pred             CCCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCc----------c----
Q 024779          128 PEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVT----------D----  193 (262)
Q Consensus       128 ~~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----------~----  193 (262)
                      .-.++|+++.|+++++.- |-.  .||++.....-+..+..-..+.++    +..|||+...+..          +    
T Consensus        22 ~~~lDHlVi~v~~l~~lG-~~~--~~f~~~~GG~H~~~GT~N~Li~fd----g~YLElIai~~~~~~~~~~~~~~~~~~f   94 (274)
T 3p8a_A           22 ILKFDHIIHYIDQLDRFS-FPG--DVIKLHSGGYHHKYGTFNKLGYIN----ENYIELLDVENNEKLKKMAKTIEGGVAF   94 (274)
T ss_dssp             CCEEEEEEEECTTGGGCC-CGG--GSSCCEEEEEETTTTEEEEEEECS----SSEEEEEEESCHHHHHHHTTSTGGGTCT
T ss_pred             cccCCEEEEEeccHHHcC-Ccc--ceEEeCCCccCCCCCCEEEEEeeC----CEEEEEEeecCcccccccccccCccchH
Confidence            457999999999885431 111  128776543322222222333332    3567776543321          1    


Q ss_pred             ------cccCCceeEEEEEecCHHHHHHHHHHhCCeeecC---CccCCCCc---ceEEEEeCCC
Q 024779          194 ------YDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTRE---PGPLPGIN---TKITACLDPD  245 (262)
Q Consensus       194 ------~~~~~~~~~i~~~v~dl~~~~~~l~~~g~~~~~~---~~~~~~~~---~~~~~~~DP~  245 (262)
                            ...++|+.++++.++|+++..++++++|+.+..+   ....+.|.   .+.++..|++
T Consensus        95 ~~~~~~~~~geGl~~~alrt~Di~a~~a~l~~~Gl~~~~p~~~sR~~pDG~~l~W~l~~~~d~~  158 (274)
T 3p8a_A           95 ATQIVQEKYEQGFKNICLHTNDIEAVKNKLQSEQVEVVGPIQMERDTHKDGKVKWQLLYIMNQD  158 (274)
T ss_dssp             TTHHHHTTTCCEEEEEEEECSCHHHHHHHHHTTTCEEEEEEEEEECCCC--CEEEEEEEEECSS
T ss_pred             HHHhhhhccCCCeEEEEEecCCHHHHHHHHHHcCCCcCCCccccccCCCCCEEEEEEEeccCCC
Confidence                  1245799999999999999999999999875422   12234432   3556677765

>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=89.04  E-value=2.9  Score=38.58  Aligned_cols=51  Identities=14%  Similarity=0.046  Sum_probs=37.1

Q ss_pred             eEEEEEecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          201 AQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       201 ~~i~~~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                      ..+.|.+.|+..+.+.|.+.  .....|.....   ..+|..||=||.|-|...+.
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~dp~~~~~~~~~~~~  175 (989)
T 3opy_A          125 GEVTFFTASIDKLKAKLIEI--GAEIIPSKIDL---VEFSTRDPMGDVISFSSYPS  175 (989)
T ss_dssp             CEEEEECSCHHHHHHHHHHS--SCCBCCCC--C---CCEEEESSSEEEEECCSSSC
T ss_pred             ceEEEEeCcHHHHHHHhhhc--ccccCCCCCCc---eeEEEecCCCCEEeeecCCC
Confidence            46788899999999999987  22223332222   46899999999999987654

>1k4n_A Protein EC4020, protein YECM; structural genomics, A NEW fold of protein, PSI, protein structure initiative; 1.60A {Escherichia coli} SCOP: d.32.1.5

Probab=83.69  E-value=11  Score=27.55  Aligned_cols=74  Identities=15%  Similarity=0.139  Sum_probs=45.0

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCc-EEEEEecCCCCcceeeEe------eecCCCceeEEEeeecCCCCCCCCCCCceeE
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGM-KLLRKRDIPEEKYTNAFL------GYGPEDSHFVIELTYNYGVDKYDIGTGFGHF   73 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~-~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i   73 (262)
                      ++||+++|++.+.+.+|-+..+-. ++......++ + ....+      .+++... ..+||..++.  +.....|+-||
T Consensus        44 ~DHIalRvn~~~~Ae~~~~~l~~~G~llSen~ING-R-PI~l~~L~qPL~~~~~~I-~cvELP~P~~--K~Yp~eGWEHI  118 (192)
T 1k4n_A           44 ADHISLRCHQNATAERWRRGFEQCGELLSENMING-R-PICLFKLHEPVQVAHWQF-SIVELPWPGE--KRYPHEGWEHI  118 (192)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHTTTEEEEEEEEETT-E-EEEEEEEEEEEEETTEEE-EEEEEECCCS--SCCSSCEEEEE
T ss_pred             CcEEEEecCCHHHHHHHHHHHHHhchhhhccccCC-e-eEEEEEcCCCceeCCeEE-EEEEcCCCCC--CCCCCCCceEE
Confidence            489999999999999999988764 4444332221 1 22222      2222211 2356655432  33345799999


Q ss_pred             EEEeCC
Q 024779           74 GIAVDD   79 (262)
Q Consensus        74 ~~~v~d   79 (262)
                      -+.++.
T Consensus       119 E~Vlp~  124 (192)
T 1k4n_A          119 EIVLPG  124 (192)
T ss_dssp             EEECCS
T ss_pred             EEEecC
Confidence            999983

>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=82.82  E-value=30  Score=32.11  Aligned_cols=50  Identities=16%  Similarity=0.197  Sum_probs=35.2

Q ss_pred             eeEEEEeCCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcC
Q 024779           71 GHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        71 ~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                      ..+.|.+.|+.++.+.|.+...+.  .|...   ....+|..||-||.+.|....
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~dp~~~~~~~~~~~  174 (989)
T 3opy_A          125 GEVTFFTASIDKLKAKLIEIGAEI--IPSKI---DLVEFSTRDPMGDVISFSSYP  174 (989)
T ss_dssp             CEEEEECSCHHHHHHHHHHSSCCB--CCCC-----CCCEEEESSSEEEEECCSSS
T ss_pred             ceEEEEeCcHHHHHHHhhhccccc--CCCCC---CceeEEEecCCCCEEeeecCC
Confidence            458899999999999998873332  22221   223478899999999888543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	262
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	2e-27
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	3e-19
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	2e-24
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	7e-16
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	9e-23
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	4e-13
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	8e-18
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	7e-14
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	4e-17
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	1e-07
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	2e-16
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	7e-08
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	3e-16
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	4e-07
d1sqia1	149	d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxyge	1e-15
d1sqia1	149	d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxyge	8e-06
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	8e-15
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	4e-07
d1jc4a_	145	d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propion	9e-15
d1jc4a_	145	d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propion	5e-05
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	1e-14
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	2e-08
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	5e-14
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	1e-06
d1ss4a_	149	d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillu	1e-13
d1ss4a_	149	d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillu	8e-07
d1f1ua1	146	d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxyge	8e-13
d1f1ua1	146	d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxyge	3e-05
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	3e-12
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	6e-07
d1f1ua2	176	d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxy	7e-12
d1f1ua2	176	d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxy	6e-06
d1nkia_	134	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	3e-11
d1nkia_	134	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	2e-04
d1zswa2	170	d.32.1.10 (A:145-314) Hypothetical protein BC1024	2e-10
d1zswa2	170	d.32.1.10 (A:145-314) Hypothetical protein BC1024	0.002
d1npba_	140	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	5e-10
d1npba_	140	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	1e-04
d1lgta1	131	d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygena	6e-10
d1lgta1	131	d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygena	2e-04
d1cjxa2	203	d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxy	1e-09
d1cjxa2	203	d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxy	4e-04
d1xqaa_	113	d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillu	2e-09
d1xqaa_	113	d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillu	4e-04
d2pjsa1	111	d.32.1.2 (A:3-113) Uncharacterized protein Atu1953	4e-09
d2pjsa1	111	d.32.1.2 (A:3-113) Uncharacterized protein Atu1953	9e-04
d1klla_	128	d.32.1.2 (A:) Mitomycin resistance protein D, MRD	6e-09
d1klla_	128	d.32.1.2 (A:) Mitomycin resistance protein D, MRD	0.003
d1kw3b2	156	d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxyge	2e-08
d1kw3b1	132	d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygena	2e-08
d2i7ra1	115	d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Str	3e-08
d2i7ra1	115	d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Str	7e-04
d1sp8a2	224	d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxy	3e-08
d1sp8a2	224	d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxy	3e-05
d1xrka_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	8e-08
d1xrka_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	4e-05
d1ecsa_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {K	9e-07
d1cjxa1	150	d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxyge	1e-06
d1xy7a_	135	d.32.1.9 (A:) Hypothetical protein At5g48480 {Thal	1e-05
d1xy7a_	135	d.32.1.9 (A:) Hypothetical protein At5g48480 {Thal	3e-04
d1sqia2	210	d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxy	3e-05
d1sqia2	210	d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxy	2e-04
d1jifa_	122	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	3e-05
d1jifa_	122	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	5e-04
d1sqda2	230	d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxy	5e-05
d1t47a2	199	d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxy	6e-05
d1t47a2	199	d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxy	0.001
d1u6la_	137	d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudom	0.001

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score =  100 bits (250), Expect = 2e-27
 Identities = 79/131 (60%), Positives = 97/131 (74%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
           +LH + RVGDL R+I FYT+ LGMKLLR  + PE KY+ AF+GYGPE    VIELTYN+G
Sbjct: 3   LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWG 62

Query: 61  VDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 120
           VDKY++GT +GH  ++VD+ A+  E I+  GG VTRE GPVKGG TVIAF+EDPDGYK E
Sbjct: 63  VDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIE 122

Query: 121 LLERGPTPEPL 131
           L+E       L
Sbjct: 123 LIEEKDAGRGL 133

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score = 79.3 bits (194), Expect = 3e-19
 Identities = 64/128 (50%), Positives = 84/128 (65%)

Query: 134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD 193
            MLRVGDL RSI+FY +  GM+LLR  +NPEYKY++A +GYGPE +  V+ELTYN+GV  
Sbjct: 6   TMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDK 65

Query: 194 YDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVD 253
           Y+ G AY  IA+  D+  +  E I+  GG VTRE GP+ G  T I    DPDG+K   ++
Sbjct: 66  YELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIE 125

Query: 254 NVDFLKEL 261
             D  + L
Sbjct: 126 EKDAGRGL 133

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score = 93.2 bits (230), Expect = 2e-24
 Identities = 66/130 (50%), Positives = 80/130 (61%), Gaps = 5/130 (3%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
           MLH + RVGDLDR+IKFYTE LGMK+LRK D+PE+KYT  FLGYGPE S  V+ELTYNYG
Sbjct: 4   MLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYG 63

Query: 61  VDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 120
           V  Y     +GH  I V+DV + V  ++     +  E          +AF+ DPDGY  E
Sbjct: 64  VTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDESGF-----MAFVVDPDGYYIE 118

Query: 121 LLERGPTPEP 130
           LL      E 
Sbjct: 119 LLNEKTMMEK 128

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score = 70.5 bits (171), Expect = 7e-16
 Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 5/129 (3%)

Query: 134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD 193
            M+RVGDLDRSI FY +  GM++LRK D PE KYT+  +GYGPE  + VLELTYNYGVT 
Sbjct: 7   TMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTS 66

Query: 194 YDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVD 253
           Y    AY  IAIG +DV +    ++     +  E       +  +   +DPDG+    ++
Sbjct: 67  YKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDE-----SGFMAFVVDPDGYYIELLN 121

Query: 254 NVDFLKELE 262
               +++ E
Sbjct: 122 EKTMMEKAE 130

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.0 bits (222), Expect = 9e-23
 Identities = 46/152 (30%), Positives = 68/152 (44%), Gaps = 26/152 (17%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPE------------- 47
           +   + RV D  +++ FYT  LGM L++K D P  K++  FL Y  +             
Sbjct: 24  LQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAW 83

Query: 48  --DSHFVIELTYNYGVDKYD---------IGTGFGHFGIAVDDVAKTVELIKAKGGKVTR 96
                  +ELT+N+G +  +            GFGH GIAV DV    +  +  G K  +
Sbjct: 84  ALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVK 143

Query: 97  EPGPVKGGNTVIAFIEDPDGYKFELLERGPTP 128
           +P    G    +AFI+DPDGY  E+L      
Sbjct: 144 KPDD--GKMKGLAFIQDPDGYWIEILNPNKMA 173

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.8 bits (154), Expect = 4e-13
 Identities = 36/142 (25%), Positives = 59/142 (41%), Gaps = 26/142 (18%)

Query: 131 LCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLE------ 184
           L Q MLRV D  +S++FY +  GM L++K D P  K+++  + Y  ++     +      
Sbjct: 24  LQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAW 83

Query: 185 ---------LTYNYGVTDYD---------KGNAYAQIAIGTDDVYKTAEAIKLFGGKVTR 226
                    LT+N+G  D +             +  I I   DVY   +  +  G K  +
Sbjct: 84  ALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVK 143

Query: 227 EPGPLPGINTKITACLDPDGWK 248
           +P    G    +    DPDG+ 
Sbjct: 144 KPD--DGKMKGLAFIQDPDGYW 163

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 75.3 bits (184), Expect = 8e-18
 Identities = 24/124 (19%), Positives = 42/124 (33%), Gaps = 8/124 (6%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
            + +    G LD  I+FY E L +K + +            + +G   + + +E T   G
Sbjct: 10  QIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNGYD---GVMFGLPHADYHLEFTQYEG 66

Query: 61  VDKYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGY 117
                +          V    ++A     +K  G +      P          IEDPDG+
Sbjct: 67  GSTAPVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGG--VTIEDPDGW 124

Query: 118 KFEL 121
           +   
Sbjct: 125 RIVF 128

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 64.9 bits (157), Expect = 7e-14
 Identities = 18/127 (14%), Positives = 36/127 (28%), Gaps = 6/127 (4%)

Query: 131 LCQVMLRV----GDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELT 186
                +R+    G LD  I FYE+   ++ + +         +       +      +  
Sbjct: 6   FQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNGYDGVMFGLPHADYHLEFTQYE 65

Query: 187 YNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDG 246
                      +          ++      +K  G +      P            DPDG
Sbjct: 66  GGSTAPVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGG--VTIEDPDG 123

Query: 247 WKTVFVD 253
           W+ VF++
Sbjct: 124 WRIVFMN 130

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 74.5 bits (182), Expect = 4e-17
 Identities = 22/139 (15%), Positives = 35/139 (25%), Gaps = 18/139 (12%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           HV     D       ++  LG  L  + D+      +A L        F+    Y +G D
Sbjct: 16  HVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGAD 75

Query: 63  KYDI-----------------GTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGN 105
                                G       + V D         A G +    P  +  G 
Sbjct: 76  AATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRG- 134

Query: 106 TVIAFIEDPDGYKFELLER 124
             +A +E         +  
Sbjct: 135 FRLAEVELYGDVVLRYVSY 153

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 48.3 bits (114), Expect = 1e-07
 Identities = 18/117 (15%), Positives = 28/117 (23%), Gaps = 17/117 (14%)

Query: 134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD 193
           V L   D   +   +    G  L  + D        A +       + +    Y +G   
Sbjct: 17  VELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADA 76

Query: 194 -----------------YDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPG 233
                             D G A   +A+   D      A    G +    P  L  
Sbjct: 77  ATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGR 133

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 72.2 bits (176), Expect = 2e-16
 Identities = 22/145 (15%), Positives = 41/145 (28%), Gaps = 24/145 (16%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           H+ +  GD     + ++  LGM+   K D+      +A       D  F+    Y+  + 
Sbjct: 15  HIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLS 74

Query: 63  KYDIG-----------------------TGFGHFGIAVDDVAKTVELIKAKGGKVTREPG 99
             +I                         G     I V+D      +  A G   +  P 
Sbjct: 75  AGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPI 134

Query: 100 PVKGGNTVIAFIEDPDGYKFELLER 124
            +      IA ++         +  
Sbjct: 135 VLNEA-VTIAEVKLYGDVVLRYVSY 158

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 48.7 bits (115), Expect = 7e-08
 Identities = 15/123 (12%), Positives = 25/123 (20%), Gaps = 23/123 (18%)

Query: 134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD 193
           +    GD       +    GM    K D        A       D   +    Y+  ++ 
Sbjct: 16  IEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSA 75

Query: 194 YDKGNAYAQ-----------------------IAIGTDDVYKTAEAIKLFGGKVTREPGP 230
            +                              +AI  +D           G   +  P  
Sbjct: 76  GEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIV 135

Query: 231 LPG 233
           L  
Sbjct: 136 LNE 138

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 71.6 bits (174), Expect = 3e-16
 Identities = 16/131 (12%), Positives = 32/131 (24%), Gaps = 4/131 (3%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHF--VIELTYNYG 60
           H+     + +    FY   LG++ ++     ++             S    +        
Sbjct: 9   HISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLV 68

Query: 61  VDKYDIGTGFGHFGIAVDDVAKTVE-LIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 119
              Y         G+ V           + +   V             + F ED +G + 
Sbjct: 69  GRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQF-EDAEGLRL 127

Query: 120 ELLERGPTPEP 130
            LL        
Sbjct: 128 VLLVSNGEKVE 138

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 46.2 bits (108), Expect = 4e-07
 Identities = 12/115 (10%), Positives = 29/115 (25%), Gaps = 2/115 (1%)

Query: 134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIA--MMGYGPEDKNVVLELTYNYGV 191
           + +   + + + +FY+   G+  ++   N +                   +         
Sbjct: 10  ISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVG 69

Query: 192 TDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDG 246
             Y   NA  +I +            + F     +        N       D +G
Sbjct: 70  RTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEG 124

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.9 bits (170), Expect = 1e-15
 Identities = 24/129 (18%), Positives = 43/129 (33%), Gaps = 7/129 (5%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
            V + VG+  +   FY   +G + L  + +                  FV+    N    
Sbjct: 14  SVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSALNPWNK 73

Query: 63  KYDI-----GTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVK--GGNTVIAFIEDPD 115
           +        G G       V+D    V+  + +G K+ REP   +   G    A ++   
Sbjct: 74  EMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYG 133

Query: 116 GYKFELLER 124
                L+E+
Sbjct: 134 DTTHTLVEK 142

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.5 bits (99), Expect = 8e-06
 Identities = 21/111 (18%), Positives = 34/111 (30%), Gaps = 5/111 (4%)

Query: 134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD 193
           V   VG+  ++ +FY    G E L  +        +            VL    N    +
Sbjct: 15  VTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSALNPWNKE 74

Query: 194 YDK-----GNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKIT 239
                   G+    IA   +D     +  +  G K+ REP        K+ 
Sbjct: 75  MGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVK 125

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 67.9 bits (165), Expect = 8e-15
 Identities = 25/132 (18%), Positives = 41/132 (31%), Gaps = 10/132 (7%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
            VV+ VG+  +   +Y+   GM+L+            A        + FV+         
Sbjct: 10  AVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATP 69

Query: 63  KYDI--------GTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGN--TVIAFIE 112
                       G G     I V D           G +   EP  +K  +   V+A I 
Sbjct: 70  WGHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIA 129

Query: 113 DPDGYKFELLER 124
                +  L++R
Sbjct: 130 TYGKTRHTLVDR 141

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 46.4 bits (109), Expect = 4e-07
 Identities = 22/134 (16%), Positives = 37/134 (27%), Gaps = 10/134 (7%)

Query: 134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD 193
           V+  VG+  ++ ++Y  AFGM+L+            A           VL          
Sbjct: 11  VVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPW 70

Query: 194 YD--------KGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACL--D 243
                      G+    +AI   D           G +   EP  L   +  +       
Sbjct: 71  GHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIAT 130

Query: 244 PDGWKTVFVDNVDF 257
               +   VD   +
Sbjct: 131 YGKTRHTLVDRTGY 144

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

 Score = 67.3 bits (163), Expect = 9e-15
 Identities = 26/133 (19%), Positives = 50/133 (37%), Gaps = 12/133 (9%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIEL------- 55
           HV Y   D D   K+Y E  G   L + + PE+      +    + +  + ++       
Sbjct: 10  HVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLN 69

Query: 56  ---TYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFI- 111
              T    + K++   G  H    VDD+      ++ +G ++  +   +  G   I F+ 
Sbjct: 70  DESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMH 129

Query: 112 -EDPDGYKFELLE 123
            +   G   EL +
Sbjct: 130 PKSGKGVLIELTQ 142

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

 Score = 40.0 bits (92), Expect = 5e-05
 Identities = 19/126 (15%), Positives = 41/126 (32%), Gaps = 14/126 (11%)

Query: 134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGP--EDKNVVLELTY---- 187
           V     D D +  +Y++ FG   L + +NPE      MM       +    +++      
Sbjct: 11  VAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLND 70

Query: 188 ----NYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACL- 242
                  +  ++       +A   DD+   +  ++  G ++  +  P  G        + 
Sbjct: 71  ESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDE-PKLGTGGNRINFMH 129

Query: 243 --DPDG 246
                G
Sbjct: 130 PKSGKG 135

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 66.5 bits (161), Expect = 1e-14
 Identities = 21/119 (17%), Positives = 38/119 (31%), Gaps = 6/119 (5%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           H+ + V DL+R  +        + +   D  +   +        +     I +    G  
Sbjct: 7   HMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD-----IWVAIMQGEK 61

Query: 63  KYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 121
             +       F I   D  +  E +   G  +      V+G    I +  D D + FEL
Sbjct: 62  LAERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSI-YFYDDDNHMFEL 119

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 49.5 bits (117), Expect = 2e-08
 Identities = 17/113 (15%), Positives = 33/113 (29%), Gaps = 6/113 (5%)

Query: 134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD 193
           +   V DL+R     E  F    +   D  ++  +        +     + +    G   
Sbjct: 8   MTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD-----IWVAIMQGEKL 62

Query: 194 YDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDG 246
            ++   +    I   D  + AE +   G  +      + G    I    D D 
Sbjct: 63  AERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSI-YFYDDDN 114

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 65.7 bits (159), Expect = 5e-14
 Identities = 18/133 (13%), Positives = 36/133 (27%), Gaps = 11/133 (8%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
             H +    +L  T   +T+ LG  L  +           F          +    ++  
Sbjct: 6   FDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQF--------LSLSTKAHDVA 57

Query: 61  VDKYDIGTGFGHFGIAVDDV---AKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGY 117
              +       H    ++      +  +LI      +   P      +    +  DP G 
Sbjct: 58  FIHHPEKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGN 117

Query: 118 KFELLERGPTPEP 130
           + E+   G    P
Sbjct: 118 RNEVFCGGDYNYP 130

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 45.3 bits (106), Expect = 1e-06
 Identities = 10/113 (8%), Positives = 27/113 (23%), Gaps = 5/113 (4%)

Query: 134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD 193
            ++   +L  + + + +  G  L  +  +         +    +  +V        G   
Sbjct: 9   ALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHHPEKGRLH 68

Query: 194 YDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDG 246
           +   +      +       +     +  G           I        DP G
Sbjct: 69  HVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIY-----FFDPSG 116

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

 Score = 64.7 bits (156), Expect = 1e-13
 Identities = 26/140 (18%), Positives = 45/140 (32%), Gaps = 18/140 (12%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPE---------DSHF 51
           M +V   V  LD  I F+ E +G+ L  + ++  E                     D H 
Sbjct: 10  MDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHS 68

Query: 52  VIELTYNYGV-------DKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGG 104
            IEL+                   G+      V+D+ + V  +   G ++  E    +  
Sbjct: 69  RIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENS 128

Query: 105 NTVIAFIEDPDGYKFELLER 124
              + +I   +G    L E 
Sbjct: 129 YR-LCYIRGVEGILIGLAEE 147

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

 Score = 45.4 bits (106), Expect = 8e-07
 Identities = 18/128 (14%), Positives = 41/128 (32%), Gaps = 16/128 (12%)

Query: 134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYG--------PEDKNVVLEL 185
           V + V  LD +I+F+E+       R     E+   +  +G            D +  +EL
Sbjct: 13  VSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIEL 72

Query: 186 TYNYGVTD-------YDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKI 238
           +                    Y ++    +D+ +    +   G ++  E       + ++
Sbjct: 73  SRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYEN-SYRL 131

Query: 239 TACLDPDG 246
                 +G
Sbjct: 132 CYIRGVEG 139

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 146

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 62.4 bits (150), Expect = 8e-13
 Identities = 22/131 (16%), Positives = 42/131 (32%), Gaps = 10/131 (7%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           ++   V DL ++ +FY + LG+ +  + +                  + V+       V 
Sbjct: 19  YMEIVVTDLAKSREFYVDVLGLHVTEEDE----NTIYLRSLEEFIHHNLVLRQGPIAAVA 74

Query: 63  KYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL 122
            +       +   +  +V       K  G +  R       G      +EDP G+ +E  
Sbjct: 75  AF------AYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFF 128

Query: 123 ERGPTPEPLCQ 133
                 E L Q
Sbjct: 129 YETEHVERLTQ 139

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 146

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 41.2 bits (95), Expect = 3e-05
 Identities = 24/143 (16%), Positives = 42/143 (29%), Gaps = 17/143 (11%)

Query: 126 PTP-EPLCQVM------LRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPED 178
           PTP  P   ++      + V DL +S  FY    G+ +  + +N  Y  ++    +    
Sbjct: 5   PTPSVPAPDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDENTIYLRSLEEFIHH--- 61

Query: 179 KNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKI 238
                               A+A       +V       K  G +  R            
Sbjct: 62  -------NLVLRQGPIAAVAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDS 114

Query: 239 TACLDPDGWKTVFVDNVDFLKEL 261
               DP G+   F    + ++ L
Sbjct: 115 VRVEDPLGFPYEFFYETEHVERL 137

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 60.4 bits (145), Expect = 3e-12
 Identities = 21/119 (17%), Positives = 36/119 (30%), Gaps = 9/119 (7%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           HV  RV D+ + ++ Y E LG+  + + D                      +        
Sbjct: 10  HVQLRVLDMSKALEHYVELLGLIEMDRDDQGRVYLKAWTEVDKFSLVLREADEPGMD--- 66

Query: 63  KYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 121
                   G   +  D + +    + A G  V + P             + P G+ FEL
Sbjct: 67  ------FMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFEL 119

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 45.7 bits (107), Expect = 6e-07
 Identities = 15/113 (13%), Positives = 32/113 (28%), Gaps = 9/113 (7%)

Query: 134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD 193
           V LRV D+ +++  Y +  G+  + + D                        +      D
Sbjct: 11  VQLRVLDMSKALEHYVELLGLIEMDRDDQGRVYLKAWTEVDKF---------SLVLREAD 61

Query: 194 YDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDG 246
               +      +  D + +    +  +G  V + P        +      P G
Sbjct: 62  EPGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSG 114

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 60.3 bits (145), Expect = 7e-12
 Identities = 21/123 (17%), Positives = 40/123 (32%), Gaps = 9/123 (7%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
           + H      D+ R   +  E LG ++       +     A++          +       
Sbjct: 6   LDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGNGPR 64

Query: 61  VDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFI--EDPDGYK 118
           +      T   H  I + D       + A       E GP + G +   ++   DPDG++
Sbjct: 65  MHHVAFATHEKHNIIQICDK------MGALRISDRIERGPGRHGVSNAFYLYILDPDGHR 118

Query: 119 FEL 121
            E+
Sbjct: 119 IEI 121

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 43.3 bits (101), Expect = 6e-06
 Identities = 16/116 (13%), Positives = 30/116 (25%), Gaps = 9/116 (7%)

Query: 134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD 193
                 D+ R   + E   G  +     + +     A M       +  L       +  
Sbjct: 9   FNQVTPDVPRGRAYLE-DLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGNGPRM-- 65

Query: 194 YDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITAC--LDPDGW 247
               +  A       ++ +  + +         E GP     +       LDPDG 
Sbjct: 66  ----HHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGH 117

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 57.6 bits (138), Expect = 3e-11
 Identities = 29/119 (24%), Positives = 44/119 (36%), Gaps = 14/119 (11%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           H+   V DL  +I FY + LG +L             A+L  G       + L+      
Sbjct: 7   HLTLAVADLPASIAFYRDLLGFRLEA------RWDQGAYLELG----SLWLCLSREPQYG 56

Query: 63  KYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 121
                     FGIA  D A+    ++A G  V         G++   +  DPDG++ E 
Sbjct: 57  GPAADYTHYAFGIAAADFARFAAQLRAHG--VREWKQNRSEGDSF--YFLDPDGHRLEA 111

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 38.3 bits (88), Expect = 2e-04
 Identities = 24/116 (20%), Positives = 37/116 (31%), Gaps = 14/116 (12%)

Query: 131 LCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYG 190
           L  + L V DL  SI FY    G  L  +          A +  G    ++ L L+    
Sbjct: 5   LNHLTLAVADLPASIAFYRDLLGFRLEARW------DQGAYLELG----SLWLCLSREPQ 54

Query: 191 VTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDG 246
                    +    I   D  + A  ++  G +  ++              LDPDG
Sbjct: 55  YGGPAADYTHYAFGIAAADFARFAAQLRAHGVREWKQNRS----EGDSFYFLDPDG 106

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 170

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 56.3 bits (135), Expect = 2e-10
 Identities = 25/127 (19%), Positives = 42/127 (33%), Gaps = 12/127 (9%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
            V   V  LD+     TE  G   + + D        A       ++   I + Y  G  
Sbjct: 15  SVELTVRRLDKMASTLTEIFGYTEVSRNDQ------EAIFQSIKGEAFGEIVVKYLDGPT 68

Query: 63  KYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 119
           +        H  I V    ++A   E +K +G   +   G +        +  + +G  F
Sbjct: 69  EKPGRGSIHHLAIRVKNDAELAYWEEQVKQRGFHSS---GIIDRFYFKSLYFRESNGILF 125

Query: 120 ELLERGP 126
           E+   GP
Sbjct: 126 EIATDGP 132

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 170

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 35.5 bits (81), Expect = 0.002
 Identities = 10/42 (23%), Positives = 17/42 (40%)

Query: 134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYG 175
           V L V  LD+  +   + FG   + + D      +I    +G
Sbjct: 16  VELTVRRLDKMASTLTEIFGYTEVSRNDQEAIFQSIKGEAFG 57

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

 Score = 54.3 bits (129), Expect = 5e-10
 Identities = 23/119 (19%), Positives = 42/119 (35%), Gaps = 11/119 (9%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           H+   V DL +++ F+ E LG+           ++         +    +        V 
Sbjct: 7   HLTLAVSDLQKSVTFWHELLGLT-------LHARWNTGAYLTCGDLWVCLSYDEARQYVP 59

Query: 63  KYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 121
             +       F +A +D     + ++  G  VT        G +   +  DPDG+K EL
Sbjct: 60  PQESDYTHYAFTVAEEDFEPLSQRLEQAG--VTIWKQNKSEGASF--YFLDPDGHKLEL 114

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

 Score = 39.2 bits (90), Expect = 1e-04
 Identities = 16/113 (14%), Positives = 37/113 (32%), Gaps = 11/113 (9%)

Query: 134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD 193
           + L V DL +S+ F+ +  G+ L  + +               +    +        V  
Sbjct: 8   LTLAVSDLQKSVTFWHELLGLTLHARWNTG-------AYLTCGDLWVCLSYDEARQYVPP 60

Query: 194 YDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDG 246
            +    +    +  +D    ++ ++  G  + ++              LDPDG
Sbjct: 61  QESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKS----EGASFYFLDPDG 109

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]} Length = 131

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

 Score = 53.8 bits (128), Expect = 6e-10
 Identities = 22/121 (18%), Positives = 41/121 (33%), Gaps = 14/121 (11%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           ++ + V D+     F T+ LG+         E   T+    +  +   + I +       
Sbjct: 7   YMGFAVSDVAAWRSFLTQKLGLM--------EAGTTDNGDLFRIDSRAWRIAVQQ----G 54

Query: 63  KYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFI--EDPDGYKFE 120
           + D     G+       +A+  + +K  G  VT     +     V   I   DP G   E
Sbjct: 55  EVDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLE 114

Query: 121 L 121
           +
Sbjct: 115 I 115

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]} Length = 131

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

 Score = 38.0 bits (87), Expect = 2e-04
 Identities = 19/118 (16%), Positives = 31/118 (26%), Gaps = 14/118 (11%)

Query: 131 LCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYG 190
           L  +   V D+    +F  Q  G+      DN +     +                    
Sbjct: 5   LGYMGFAVSDVAAWRSFLTQKLGLMEAGTTDNGDLFRIDSRAW------------RIAVQ 52

Query: 191 VTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGI--NTKITACLDPDG 246
             + D              + + A+ +K  G  VT     L      T +    DP G
Sbjct: 53  QGEVDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFG 110

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 203

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 54.2 bits (130), Expect = 1e-09
 Identities = 24/132 (18%), Positives = 37/132 (28%), Gaps = 12/132 (9%)

Query: 3   HVVYRV--GDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
           H+ + V  G +     FY +    +  R  DI  E            D    I L     
Sbjct: 8   HLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESS 67

Query: 61  VDKYDIG--------TGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIE 112
                I          G  H     DD+ KT + +K  G +      P      ++    
Sbjct: 68  KGAGQIEEFLMQFNGEGIQHVAFLTDDLVKTWDALKKIGMRFM--TAPPDTYYEMLEGRL 125

Query: 113 DPDGYKFELLER 124
              G   + L+ 
Sbjct: 126 PDHGEPVDQLQA 137

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 203

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 38.0 bits (88), Expect = 4e-04
 Identities = 19/91 (20%), Positives = 29/91 (31%), Gaps = 8/91 (8%)

Query: 136 LRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD-- 193
           +  G +    NFYE+ F     R  D       +        D  + + L          
Sbjct: 13  VYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQ 72

Query: 194 -----YDKGNAYAQ-IAIGTDDVYKTAEAIK 218
                        Q +A  TDD+ KT +A+K
Sbjct: 73  IEEFLMQFNGEGIQHVAFLTDDLVKTWDALK 103

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]} Length = 113

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

 Score = 51.7 bits (122), Expect = 2e-09
 Identities = 18/119 (15%), Positives = 35/119 (29%), Gaps = 13/119 (10%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           H+   V D+    +F  +  G+     R        +         +   I         
Sbjct: 6   HLNLTVADVVAAREFLEKYFGLTCSGTRGNAFAVMRD---------NDGFILTLMKGKEV 56

Query: 63  KYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 121
           +Y      G    + + V K  + +K  G  V          +    ++E P G+  E+
Sbjct: 57  QYPKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPK----HAHAYTFYVEAPGGFTIEV 111

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]} Length = 113

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

 Score = 37.0 bits (84), Expect = 4e-04
 Identities = 9/39 (23%), Positives = 14/39 (35%)

Query: 134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMM 172
           + L V D+  +  F E+ FG+     R N          
Sbjct: 7   LNLTVADVVAAREFLEKYFGLTCSGTRGNAFAVMRDNDG 45

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]} Length = 111

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 51.2 bits (121), Expect = 4e-09
 Identities = 20/122 (16%), Positives = 36/122 (29%), Gaps = 13/122 (10%)

Query: 1   MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 60
            +       +  R   FY + LGM              + ++           ++++   
Sbjct: 3   RVVANIATPEPARAQAFYGDILGM---------PVAMDHGWIVTHASPLEAHAQVSFAR- 52

Query: 61  VDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 120
             +   GT      I VD+  +    I   G  +   P     G     F+ DP G    
Sbjct: 53  --EGGSGTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQR-LFLRDPFGKLIN 109

Query: 121 LL 122
           +L
Sbjct: 110 IL 111

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]} Length = 111

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 35.7 bits (81), Expect = 9e-04
 Identities = 14/113 (12%), Positives = 26/113 (23%), Gaps = 13/113 (11%)

Query: 134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD 193
             +   +  R+  FY    GM +           +                        +
Sbjct: 6   ANIATPEPARAQAFYGDILGMPVAMDHGWIVTHASPLEAHAQVSFAR------------E 53

Query: 194 YDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDG 246
              G     ++I  D+  +    I   G  +   P        +     DP G
Sbjct: 54  GGSGTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAW-GVQRLFLRDPFG 105

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]} Length = 128

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

 Score = 50.9 bits (120), Expect = 6e-09
 Identities = 20/127 (15%), Positives = 36/127 (28%), Gaps = 4/127 (3%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIP-EEKYTNAFLGYGPEDSHFVIELTYNYGV 61
                V D+ ++++FY +            P  E   +  +    +    V      +  
Sbjct: 5   LFAVVVEDMAKSMEFYRKMGVEIPAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPEWQA 64

Query: 62  DKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 121
                             V K    +   G +   +P     G    A ++DPDG   +L
Sbjct: 65  PTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRY-AIVKDPDGNVVDL 123

Query: 122 LERGPTP 128
               P P
Sbjct: 124 FA--PLP 128

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]} Length = 128

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

 Score = 34.7 bits (78), Expect = 0.003
 Identities = 18/117 (15%), Positives = 32/117 (27%), Gaps = 2/117 (1%)

Query: 131 LCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGY-GPEDKNVVLELTYNY 189
           +    + V D+ +S+ FY +            P  +  +        +    V      +
Sbjct: 3   ISLFAVVVEDMAKSMEFYRKMGVEIPAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPEW 62

Query: 190 GVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDG 246
                    A A     T  V K    +   G +   +P        +     DPDG
Sbjct: 63  QAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVW-GQRYAIVKDPDG 118

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 156

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 50.2 bits (119), Expect = 2e-08
 Identities = 25/118 (21%), Positives = 39/118 (33%), Gaps = 9/118 (7%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           H V  V D  + + FYTE LG  L    DI     T+    +   +          + + 
Sbjct: 13  HFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAAFPIP 72

Query: 63  KYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGY 117
           K        HF +     DDV    + + A G   +   G      T+  + + P   
Sbjct: 73  K-----RIHHFMLQANTIDDVGYAFDRLDAAGRITS-LLGRHTNDQTLSFYADTPSPM 124

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 132

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 49.6 bits (117), Expect = 2e-08
 Identities = 16/121 (13%), Positives = 36/121 (29%), Gaps = 14/121 (11%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
           ++ + V D+     F T+ +G+               A            ++        
Sbjct: 7   YLGFAVKDVPAWDHFLTKSVGLM------AAGSAGDAALYRADQRAWRIAVQ------PG 54

Query: 63  KYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFI--EDPDGYKFE 120
           + D     G        + +  + ++  G   TR    +     V+  +  +DP G   E
Sbjct: 55  ELDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLE 114

Query: 121 L 121
           +
Sbjct: 115 I 115

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]} Length = 115

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 48.7 bits (115), Expect = 3e-08
 Identities = 19/121 (15%), Positives = 35/121 (28%), Gaps = 12/121 (9%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
            +   V ++ +        L  K              A            + L+ N+ V 
Sbjct: 5   QLDIIVSNVPQVCADLEHILDKKADY------ANDGFAQF----TIGSHCLMLSQNHLVP 54

Query: 63  KYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL 122
             +  +G     I V+DV +  + +   G KV   P     G      ++ P G   +  
Sbjct: 55  LENFQSGI-IIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTES-LLVQGPAGLVLDFY 112

Query: 123 E 123
            
Sbjct: 113 R 113

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]} Length = 115

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 36.3 bits (83), Expect = 7e-04
 Identities = 19/114 (16%), Positives = 35/114 (30%), Gaps = 12/114 (10%)

Query: 133 QVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVT 192
           Q+ + V ++ +     E     +              A         +  L L+ N+ V 
Sbjct: 5   QLDIIVSNVPQVCADLEHILDKKADYAN------DGFAQF----TIGSHCLMLSQNHLVP 54

Query: 193 DYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDG 246
             +  +    I I  +DV +  + +   G KV   P       T+      P G
Sbjct: 55  LENFQSGII-IHIEVEDVDQNYKRLNELGIKVLHGPTVTDW-GTESLLVQGPAG 106

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 224

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 50.5 bits (120), Expect = 3e-08
 Identities = 21/135 (15%), Positives = 42/135 (31%), Gaps = 25/135 (18%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEK-----YTNAFLGYGPEDSHF-VIELT 56
           H+V  V +L     ++    G     +    +         +  L    E+    + E  
Sbjct: 12  HIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPV 71

Query: 57  YNYGVD-------KYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIA 109
           +             +  G G  H  +A DDV +T+  ++A+      E            
Sbjct: 72  HGTKRRSQIQTFLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFE------------ 119

Query: 110 FIEDPDGYKFELLER 124
           F+  P    ++ + R
Sbjct: 120 FMAPPTSDYYDGVRR 134

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 224

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 41.6 bits (97), Expect = 3e-05
 Identities = 17/138 (12%), Positives = 39/138 (28%), Gaps = 18/138 (13%)

Query: 138 VGDLDRSINFYEQAFGMELLRKRDNPEYK------YTIAMMGYGPEDKNVVLELTYNYGV 191
           V +L  +  ++    G     +    +         ++ +          + E  +    
Sbjct: 17  VPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKR 76

Query: 192 T-------DYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDP 244
                   D+  G     +A+ +DDV +T   ++        E    P      +   D 
Sbjct: 77  RSQIQTFLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP-----TSDYYDG 131

Query: 245 DGWKTVFVDNVDFLKELE 262
              +   V     +KE +
Sbjct: 132 VRRRAGDVLTEAQIKECQ 149

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

 Score = 47.7 bits (112), Expect = 8e-08
 Identities = 15/120 (12%), Positives = 27/120 (22%), Gaps = 8/120 (6%)

Query: 2   LHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGV 61
              V    D+   ++F+T+ LG   +   D        A +                   
Sbjct: 6   AVPVLTARDVAEAVEFWTDRLGFSRVFVED------DFAGVVRDDVTLFISAVQDQVVPD 59

Query: 62  DKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 121
           +        G   +  +         +   G    E      G      + DP G     
Sbjct: 60  NTQAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGRE--FALRDPAGNCVHF 117

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

 Score = 40.0 bits (92), Expect = 4e-05
 Identities = 15/112 (13%), Positives = 31/112 (27%), Gaps = 8/112 (7%)

Query: 135 MLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDY 194
           +L   D+  ++ F+    G   +   D+        +  +    ++ V+       V   
Sbjct: 9   VLTARDVAEAVEFWTDRLGFSRVFVEDDFAGVVRDDVTLFISAVQDQVVPDNTQAWVWVR 68

Query: 195 DKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDG 246
                Y       +     +   +   G    E    P    +  A  DP G
Sbjct: 69  GLDELY------AEWSEVVSTNFRDASGPAMTEIVEQPW--GREFALRDPAG 112

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 44.6 bits (104), Expect = 9e-07
 Identities = 23/124 (18%), Positives = 38/124 (30%), Gaps = 20/124 (16%)

Query: 7   RVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDI 66
              D D T  FY   LG  +              F   G         +   +     D 
Sbjct: 9   PSRDFDSTAAFYER-LGFGI-------------VFRDAGWMILQRGDLMLEFFAHPGLDP 54

Query: 67  GTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTV------IAFIEDPDGYKFE 120
              +    + +DD+A+     K+ G + T    P      +      +A + DPDG    
Sbjct: 55  LASWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLR 114

Query: 121 LLER 124
           L++ 
Sbjct: 115 LIQN 118

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 150

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 44.6 bits (105), Expect = 1e-06
 Identities = 15/134 (11%), Positives = 34/134 (25%), Gaps = 11/134 (8%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 62
            + +           + E +G        +   +  N  L Y   + + ++    N    
Sbjct: 12  FIEFASPTPGTLEPIF-EIMGFTK-----VATHRSKNVHL-YRQGEINLILNNEPNSIAS 64

Query: 63  KY--DIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 120
            +  + G         V D  K        G +              +  I+   G    
Sbjct: 65  YFAAEHGPSVCGMAFRVKDSQKAYNRALELGAQPIHI--DTGPMELNLPAIKGIGGAPLY 122

Query: 121 LLERGPTPEPLCQV 134
           L++R      +  +
Sbjct: 123 LIDRFGEGSSIYDI 136

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 41.8 bits (97), Expect = 1e-05
 Identities = 16/128 (12%), Positives = 29/128 (22%), Gaps = 9/128 (7%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEE-------KYTNAFLGYGPEDSHFVIEL 55
            ++     +   + FY    G         P+           ++ L      S  V ++
Sbjct: 10  MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLA-GSSFVVCDV 68

Query: 56  TYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPD 115
           +   G            F +   D    V      G                   + DP 
Sbjct: 69  SSLPGFSTAKSEGSGVTFLLGTKDAEAAVAKAVDAGAVKVEVTEAEVELGFK-GKVTDPF 127

Query: 116 GYKFELLE 123
           G  +   E
Sbjct: 128 GVTWIFAE 135

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 37.6 bits (86), Expect = 3e-04
 Identities = 17/120 (14%), Positives = 32/120 (26%), Gaps = 7/120 (5%)

Query: 133 QVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYG------PEDKNVVLELT 186
            +++    +  ++ FY+ AFG         P+ K    +               VV +++
Sbjct: 10  MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVS 69

Query: 187 YNYGVTDYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDG 246
              G +      +     +GT D           G                     DP G
Sbjct: 70  SLPGFSTAKSEGSGVTFLLGTKDAEAAVAKAVDAGAVKVEVTEAEVE-LGFKGKVTDPFG 128

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 210

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (98), Expect = 3e-05
 Identities = 16/110 (14%), Positives = 37/110 (33%), Gaps = 14/110 (12%)

Query: 3   HVVYRV--GDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGP-EDSHFVIELTYNY 59
           H+V      +++   ++Y + L        D  +     + L      +    I++  N 
Sbjct: 27  HIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINE 86

Query: 60  GVD-----------KYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREP 98
                          Y+ G G  H  +  +D+  T+  ++ +G +    P
Sbjct: 87  PAPGRKKSQIQEYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVP 136

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 210

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (90), Expect = 2e-04
 Identities = 13/102 (12%), Positives = 34/102 (33%), Gaps = 12/102 (11%)

Query: 139 GDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGP-EDKNVVLELTYNYGVT----- 192
            +++ +  +Y +          D+ +     + +      +    +++  N         
Sbjct: 35  QEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGRKKS 94

Query: 193 ------DYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREP 228
                 DY+ G     IA+ T+D+  T   ++  G +    P
Sbjct: 95  QIQEYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVP 136

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]} Length = 122

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

 Score = 40.5 bits (93), Expect = 3e-05
 Identities = 13/117 (11%), Positives = 26/117 (22%), Gaps = 8/117 (6%)

Query: 5   VYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKY 64
           V    D+   + F+ + LG +                  +     H ++    +  ++  
Sbjct: 10  VLTAVDVPANVSFWVDTLGFEKDFGDRDFAGVRRGDIRLHISRTEHQIVADNTSAWIEVT 69

Query: 65  DIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 121
           D       +                  G      G    G      + DP G     
Sbjct: 70  DPDALHEEW------ARAVSTDYADTSGPAMTPVGESPAGRE--FAVRDPAGNCVHF 118

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]} Length = 122

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

 Score = 37.0 bits (84), Expect = 5e-04
 Identities = 13/112 (11%), Positives = 32/112 (28%), Gaps = 8/112 (7%)

Query: 135 MLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDY 194
           +L   D+  +++F+    G E      +        +  +    ++ ++    +  +   
Sbjct: 10  VLTAVDVPANVSFWVDTLGFEKDFGDRDFAGVRRGDIRLHISRTEHQIVADNTSAWIEVT 69

Query: 195 DKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDG 246
           D    + +           +       G      G  P    +  A  DP G
Sbjct: 70  DPDALHEE------WARAVSTDYADTSGPAMTPVGESPAG--REFAVRDPAG 113

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 230

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 41.2 bits (96), Expect = 5e-05
 Identities = 12/102 (11%), Positives = 31/102 (30%), Gaps = 13/102 (12%)

Query: 3   HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFL------GYGPEDSHFVIELT 56
           H V  V +L   + +     G     +    +     + L               + E  
Sbjct: 25  HAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPV 84

Query: 57  YNYGVD-------KYDIGTGFGHFGIAVDDVAKTVELIKAKG 91
           +            +++ G G  H  +  +D+ +T+  ++ + 
Sbjct: 85  HGTKRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLREMRKRS 126

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 199

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 40.7 bits (95), Expect = 6e-05
 Identities = 18/110 (16%), Positives = 37/110 (33%), Gaps = 14/110 (12%)

Query: 3   HVVYRV--GDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHF------VIE 54
           H V  V  G ++  + FY + +G   +++    +     + L               + E
Sbjct: 9   HCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINE 68

Query: 55  LTYNYGVD------KYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREP 98
                         ++  G G  H  +   D+ +TV  ++A G +    P
Sbjct: 69  PALAKKKSQIDEYLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTP 118

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 199

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 36.9 bits (85), Expect = 0.001
 Identities = 14/102 (13%), Positives = 35/102 (34%), Gaps = 12/102 (11%)

Query: 139 GDLDRSINFYEQAFGMELLRKRDNPEYK------YTIAMMGYGPEDKNVVLELTYNYGVT 192
           G ++  + FY +  G   +++    +         +  +     + K  + E       +
Sbjct: 17  GRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKS 76

Query: 193 ------DYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREP 228
                 ++  G     IA+ T D+ +T   ++  G +    P
Sbjct: 77  QIDEYLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTP 118

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 36.3 bits (83), Expect = 0.001
 Identities = 18/123 (14%), Positives = 34/123 (27%), Gaps = 12/123 (9%)

Query: 9   GDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELT-YNYGVDKYDIG 67
           G+       Y + LG  L       +            +D      L   ++ +   D  
Sbjct: 12  GNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPA-DWKDKIMHARLVVGSFALMASDNH 70

Query: 68  TGFGHFG---------IAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 118
             + + G         +     A+ +    A+GG V    GP     +      D  G  
Sbjct: 71  PAYPYEGIKGCSISLNVDSKAEAERLFNALAEGGSVQMPLGPTFWAASF-GMFTDRFGVA 129

Query: 119 FEL 121
           + +
Sbjct: 130 WMV 132

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	262
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.86
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.85
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.84
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.83
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.83
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.82
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.82
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.81
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.81
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.81
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.8
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.79
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.79
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.79
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.79
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.78
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.78
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.78
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.77
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.77
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.77
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.77
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.77
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.76
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.76
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.76
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.76
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.76
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.75
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.75
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.75
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.75
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.75
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.74
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.74
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.74
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.74
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.73
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.72
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.72
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.72
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.72
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.72
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.72
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.72
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.71
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.71
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.71
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.7
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.68
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.67
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.66
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.64
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.61
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.61
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.56
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.53
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.53
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.52
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.49
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.44
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.44
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.43
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.37
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.34
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.33
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	99.26
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.25
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.21
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.21
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	99.21
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.2
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.1
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.01
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	99.0
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	98.92
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	98.54
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	98.41
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	96.93
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	96.64
d1k4na_	190	Hypothetical protein YecM (EC4020) {Escherichia co	88.97
d2adza1	105	Alpha-1-syntrophin {Mouse (Mus musculus) [TaxId: 1	84.55
d2g3aa1	137	Probable acetyltransferase Atu2258 {Agrobacterium	83.63
d2f06a1	71	Hypothetical protein BT0572 {Bacteroides thetaiota	81.09

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=5.3e-21  Score=135.00  Aligned_cols=132  Identities=49%  Similarity=0.884  Sum_probs=95.5

Q ss_pred             CceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecC
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDD  209 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~d  209 (262)
                      ++.|++|.|+|++++.+||+++|||++...............+..........................+..|+++.+++
T Consensus         2 kl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (135)
T d1f9za_           2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDN   81 (135)
T ss_dssp             CEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECSC
T ss_pred             cceEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceeeeccccccccccccccccccccceeeccchHH
Confidence            57899999999999999999999999987755444444444443332222223333322333334445688999999999


Q ss_pred             HHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecccccccc
Q 024779          210 VYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDFLKEL  261 (262)
Q Consensus       210 l~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~~~~~  261 (262)
                      ++++.++++++|..+...|...+++..+++|++|||||.|||+|.++-.+.+
T Consensus        82 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~~~~~~~  133 (135)
T d1f9za_          82 AAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGRGL  133 (135)
T ss_dssp             HHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC-------
T ss_pred             HHHHHHHHHHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECCCccccC
Confidence            9999999999999999988888877678899999999999999998866543

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.85  E-value=5.7e-21  Score=131.26  Aligned_cols=113  Identities=19%  Similarity=0.131  Sum_probs=88.9

Q ss_pred             ceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecCH
Q 024779          131 LCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDV  210 (262)
Q Consensus       131 ~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~dl  210 (262)
                      +.|+.|.|+|++++++||+++||+++....+    .+  ..+..+    ...+.+....... ....+...+++|.|+|+
T Consensus         3 l~~i~i~V~di~~a~~FYe~~lg~~~~~~~~----~~--~~~~~g----~~~l~l~~~~~~~-~~~~~~~~~~~f~v~D~   71 (115)
T d2i7ra1           3 LNQLDIIVSNVPQVCADLEHILDKKADYAND----GF--AQFTIG----SHCLMLSQNHLVP-LENFQSGIIIHIEVEDV   71 (115)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHTSCCSEEET----TE--EEEEET----TEEEEEESSCSSS-CCCCCSCEEEEEECSCH
T ss_pred             ceEEEEEECCHHHHHHHHHHhhCCceeeecC----Ce--EEEEEc----CceeeeeecccCC-CCCCCcceEEEEEECCH
Confidence            6899999999999999999999999876432    22  334432    3556665433222 22233446899999999


Q ss_pred             HHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecc
Q 024779          211 YKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNV  255 (262)
Q Consensus       211 ~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  255 (262)
                      ++++++++++|+++..+|.+.++|. +.+|++|||||.|||+|.|
T Consensus        72 d~~~~~l~~~G~~i~~~~~~~~~g~-~~~~~~DPdGn~ie~~~~k  115 (115)
T d2i7ra1          72 DQNYKRLNELGIKVLHGPTVTDWGT-ESLLVQGPAGLVLDFYRMK  115 (115)
T ss_dssp             HHHHHHHHHHTCCEEEEEEECTTSC-EEEEEECGGGCEEEEEECC
T ss_pred             HHHHHHHHhhccccccceEEeeCCe-EEEEEECCCCCEEEEEEeC
Confidence            9999999999999999999888864 8999999999999999875

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=5.6e-20  Score=129.61  Aligned_cols=131  Identities=60%  Similarity=1.062  Sum_probs=93.8

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCH
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDV   80 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~   80 (262)
                      |.|++|.|+|+++|.+||+++|||++...............+........................+.+..|+++.++++
T Consensus         3 l~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (135)
T d1f9za_           3 LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNA   82 (135)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECSCH
T ss_pred             ceEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceeeeccccccccccccccccccccceeeccchHHH
Confidence            57999999999999999999999999877654444333333333322222223333333333344556788999999999


Q ss_pred             HHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCCCCCCc
Q 024779           81 AKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPL  131 (262)
Q Consensus        81 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~~~~~~  131 (262)
                      +++.++++++|..+..+|...+.++.+++|+.|||||.|||++..+....+
T Consensus        83 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~~~~~~~  133 (135)
T d1f9za_          83 AEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGRGL  133 (135)
T ss_dssp             HHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC-------
T ss_pred             HHHHHHHHHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECCCccccC
Confidence            999999999999998887777777788899999999999999987654443

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.83  E-value=2e-20  Score=128.52  Aligned_cols=112  Identities=19%  Similarity=0.176  Sum_probs=87.2

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCH
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDV   80 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~   80 (262)
                      |+||.|.|+|+++|.+||+++||+++....+      ..+.+..++.    .+.+......+....+.+ .+++|.|+|+
T Consensus         3 l~~i~i~V~di~~a~~FYe~~lg~~~~~~~~------~~~~~~~g~~----~l~l~~~~~~~~~~~~~~-~~~~f~v~D~   71 (115)
T d2i7ra1           3 LNQLDIIVSNVPQVCADLEHILDKKADYAND------GFAQFTIGSH----CLMLSQNHLVPLENFQSG-IIIHIEVEDV   71 (115)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHTSCCSEEET------TEEEEEETTE----EEEEESSCSSSCCCCCSC-EEEEEECSCH
T ss_pred             ceEEEEEECCHHHHHHHHHHhhCCceeeecC------CeEEEEEcCc----eeeeeecccCCCCCCCcc-eEEEEEECCH
Confidence            5899999999999999999999999876543      2455666542    344444333222223333 4699999999


Q ss_pred             HHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEc
Q 024779           81 AKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  124 (262)
Q Consensus        81 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  124 (262)
                      ++++++++++|+++..+|...++ +.+.++|.|||||.||+++.
T Consensus        72 d~~~~~l~~~G~~i~~~~~~~~~-g~~~~~~~DPdGn~ie~~~~  114 (115)
T d2i7ra1          72 DQNYKRLNELGIKVLHGPTVTDW-GTESLLVQGPAGLVLDFYRM  114 (115)
T ss_dssp             HHHHHHHHHHTCCEEEEEEECTT-SCEEEEEECGGGCEEEEEEC
T ss_pred             HHHHHHHHhhccccccceEEeeC-CeEEEEEECCCCCEEEEEEe
Confidence            99999999999999988887775 56789999999999999975

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.83  E-value=9.9e-20  Score=130.80  Aligned_cols=122  Identities=16%  Similarity=0.198  Sum_probs=90.5

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCc-----------CccceeeeeccCCCCcceEEEEeeecCCcc----
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNP-----------EYKYTIAMMGYGPEDKNVVLELTYNYGVTD----  193 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----  193 (262)
                      .+++|++|.|+|++++.+||++ |||++..+....           .......++....  +...+.|.+......    
T Consensus         8 ~ri~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~l~~~~~~~~~~~~   84 (149)
T d1ss4a_           8 LRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPD--GHSRIELSRFLTPPTIADH   84 (149)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTT--SSCEEEEEEEEESCCCCBC
T ss_pred             CEEeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeecc--cceEEEEEeeccccCcccc
Confidence            4789999999999999999998 999988654321           2223445554332  334455544221111    


Q ss_pred             ---cccCCceeEEEEEecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEec
Q 024779          194 ---YDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDN  254 (262)
Q Consensus       194 ---~~~~~~~~~i~~~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  254 (262)
                         .....++.|++|.|+|+++++++|+++|+++..+|...+++ .+++|++||||+.|||+|+
T Consensus        85 ~~~~~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~~DPdG~~iEl~e~  147 (149)
T d1ss4a_          85 RTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENS-YRLCYIRGVEGILIGLAEE  147 (149)
T ss_dssp             TTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTT-EEEEEEECGGGCEEEEEEE
T ss_pred             cccCCCCcceeEEEEeechhHHHHHHHHHCCCeEccCCeECCCC-eEEEEEECCCCCEEEEEEc
Confidence               12235889999999999999999999999999888666654 4789999999999999986

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.82  E-value=2e-19  Score=128.44  Aligned_cols=126  Identities=14%  Similarity=0.130  Sum_probs=90.4

Q ss_pred             CCCceeEEeeecChhhhHHHHHHhcCCeeeeeccC-cCccceeeeeccCCCCcceEEEEeeecCCcccccC-CceeEEEE
Q 024779          128 PEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDN-PEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKG-NAYAQIAI  205 (262)
Q Consensus       128 ~~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~i~~  205 (262)
                      -.+++||+|.|+|++++.+||+++|||++..+... +.......+...........+.+.......+...+ +++.|++|
T Consensus         4 i~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Hiaf   83 (144)
T d1zswa1           4 IKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIGL   83 (144)
T ss_dssp             CCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEEE
T ss_pred             ccceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeecccccccCCccCCCceeEEEE
Confidence            35899999999999999999999999999876432 22233333334333334445555544333333333 46899999


Q ss_pred             EecC---HHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          206 GTDD---VYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       206 ~v~d---l~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                      .|+|   ++++.++|++.|+.+. ++.+..+  ++++||+|||||.|||++..+
T Consensus        84 ~v~~~~~l~~~~~~l~~~gv~~~-~~~~~~~--~~~~yf~DPdG~~iEl~~~~~  134 (144)
T d1zswa1          84 LVPSEDSLHYWKERFEKFDVKHS-EMTTYAN--RPALQFEDAEGLRLVLLVSNG  134 (144)
T ss_dssp             EESCHHHHHHHHHHHHHTTCEEC-CSEEETT--EEEEEEECTTCCEEEEEECTT
T ss_pred             ecCCchhHHHHhhhhhccceeee-CccccCC--eEEEEEECCCCCEEEEEEeCC
Confidence            9988   7778899999999874 3444443  578999999999999998754

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.82  E-value=3e-19  Score=128.19  Aligned_cols=122  Identities=19%  Similarity=0.257  Sum_probs=88.4

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCC-----------CCcceeeEeeecCCCceeEEEee-ecCCC-C---CC
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIP-----------EEKYTNAFLGYGPEDSHFVIELT-YNYGV-D---KY   64 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~~-~~~~~-~---~~   64 (262)
                      |+||+|.|+|+++|.+||++ |||++..+....           ......+++..........+... ..... .   ..
T Consensus        10 i~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~   88 (149)
T d1ss4a_          10 MDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIADHRTAP   88 (149)
T ss_dssp             EEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCBCTTCC
T ss_pred             EeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeecccceEEEEEeeccccCcccccccC
Confidence            58999999999999999998 999988764322           12334555555443333322211 11111 1   11


Q ss_pred             CCCCCceeEEEEeCCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEc
Q 024779           65 DIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  124 (262)
Q Consensus        65 ~~~~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  124 (262)
                      ....|+.|++|.|+|+++++++|+++|+++..+|....+ +.+.+|++||||+.|||+|.
T Consensus        89 ~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iEl~e~  147 (149)
T d1ss4a_          89 VNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYEN-SYRLCYIRGVEGILIGLAEE  147 (149)
T ss_dssp             SSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETT-TEEEEEEECGGGCEEEEEEE
T ss_pred             CCCcceeEEEEeechhHHHHHHHHHCCCeEccCCeECCC-CeEEEEEECCCCCEEEEEEc
Confidence            234578999999999999999999999999888766554 67889999999999999974

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.81  E-value=2.2e-19  Score=130.81  Aligned_cols=120  Identities=9%  Similarity=0.118  Sum_probs=91.8

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEec
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTD  208 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~  208 (262)
                      -+++||.|.|+|++++++||+++|||++.+............++.....  .....+..      ....++..|++|.+.
T Consensus         4 ~rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~------~~~~~~~~h~~~~~~   75 (162)
T d1mpya2           4 VRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTK--AHDVAFIH------HPEKGRLHHVSFHLE   75 (162)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSB--SCSEEEEE------CSSSSEEEEEEEECS
T ss_pred             ccccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeecccc--cccccccc------cCCCCccceeEEEEe
Confidence            3689999999999999999999999999877665555454455443322  11122221      223457899999987


Q ss_pred             CHH---HHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccc
Q 024779          209 DVY---KTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       209 dl~---~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                      +++   +++++|++.|+++..+|.++..+..+++|++|||||.|||+...+
T Consensus        76 ~~~~~~~~~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~~~  126 (162)
T d1mpya2          76 TWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGD  126 (162)
T ss_dssp             CHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCC
T ss_pred             eehhhhhHHHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEECCc
Confidence            665   678999999999999888887766789999999999999998654

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.81  E-value=7e-19  Score=125.61  Aligned_cols=124  Identities=15%  Similarity=0.157  Sum_probs=86.9

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCC-CcceeeEeeecCCCceeEEEeeecCCCCCCCCC-CCceeEEEEeC
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPE-EKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIG-TGFGHFGIAVD   78 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~i~~~v~   78 (262)
                      |+||+|.|+|++++++||+++||+++..+....+ ......++..........+.+.......+...+ .+++|++|.|+
T Consensus         7 l~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Hiaf~v~   86 (144)
T d1zswa1           7 HHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIGLLVP   86 (144)
T ss_dssp             EEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEEEEES
T ss_pred             eeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeecccccccCCccCCCceeEEEEecC
Confidence            6899999999999999999999999987653222 222222333222233334454443333333333 46899999999


Q ss_pred             C---HHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCCC
Q 024779           79 D---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  127 (262)
Q Consensus        79 d---~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~~  127 (262)
                      |   ++++.++|++.|+.+..+ ...  ++.+++||.|||||.|||++..+.
T Consensus        87 ~~~~l~~~~~~l~~~gv~~~~~-~~~--~~~~~~yf~DPdG~~iEl~~~~~~  135 (144)
T d1zswa1          87 SEDSLHYWKERFEKFDVKHSEM-TTY--ANRPALQFEDAEGLRLVLLVSNGE  135 (144)
T ss_dssp             CHHHHHHHHHHHHHTTCEECCS-EEE--TTEEEEEEECTTCCEEEEEECTTC
T ss_pred             CchhHHHHhhhhhccceeeeCc-ccc--CCeEEEEEECCCCCEEEEEEeCCC
Confidence            8   778899999999987533 333  367889999999999999987653

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=3.8e-19  Score=131.36  Aligned_cols=128  Identities=28%  Similarity=0.507  Sum_probs=91.2

Q ss_pred             CceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCC---------------cceEEEEeeecCCc--
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPED---------------KNVVLELTYNYGVT--  192 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~l~~~~~~~--  192 (262)
                      +++|++|.|+|++++++||+++|||++......+.......+.......               ......+.......  
T Consensus        23 ~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (176)
T d1qipa_          23 LLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDD  102 (176)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTGGGC
T ss_pred             EEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccccceeEEEeeccccc
Confidence            5899999999999999999999999988765544444444444322111               11111222111110  


Q ss_pred             ---c----cccCCceeEEEEEecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecccccc
Q 024779          193 ---D----YDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDFLK  259 (262)
Q Consensus       193 ---~----~~~~~~~~~i~~~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~~~  259 (262)
                         .    .....++.|+++.++|+++++++|+++|+++..+|....+  .+++|++|||||.|||+|+.....
T Consensus       103 ~~~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l~~~Gv~~~~~p~~g~~--~~~~f~~DPdG~~IElvq~~~~~~  174 (176)
T d1qipa_         103 ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNKMAT  174 (176)
T ss_dssp             TTCCCBCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCEEEECTTSSSS--TTCEEEECTTCCEEEEECTTTGGG
T ss_pred             cCcCccCCCCCccceeEEEeeHHHHHHHHHHHHHCCCEEeeCCccCCc--eEEEEEECCCCCEEEEEeCCCCCc
Confidence               0    1123488999999999999999999999999998865443  467899999999999999987543

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.80  E-value=3.2e-19  Score=127.42  Aligned_cols=127  Identities=15%  Similarity=0.171  Sum_probs=90.6

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeec--cCCCCcceEEEEeeecCCcc--------cccCC
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMG--YGPEDKNVVLELTYNYGVTD--------YDKGN  198 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~--------~~~~~  198 (262)
                      .+|+||+|.|+|++++.+||+++||+.+.................  .........+++.+......        .....
T Consensus         6 ~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~   85 (145)
T d1jc4a_           6 ICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNGRA   85 (145)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTTCC
T ss_pred             eEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhcccCcccccccccCCCC
Confidence            579999999999999999999999999876654333222222211  11123456777776433322        12346


Q ss_pred             ceeEEEEEecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEE--eCCCCcEEEEEecc
Q 024779          199 AYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITAC--LDPDGWKTVFVDNV  255 (262)
Q Consensus       199 ~~~~i~~~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~--~DP~G~~ie~~~~~  255 (262)
                      |+.||+|.|+|+++++++|+++|++++.++.....+..+++|+  +||+|+.|||+|.+
T Consensus        86 g~~Hia~~v~di~~~~~~l~~~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          86 GLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             cceEEEEecchHHHHHHHHHHCCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEECC
Confidence            8999999999999999999999999976543332222355556  79999999999976

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.79  E-value=9e-19  Score=128.35  Aligned_cols=118  Identities=17%  Similarity=0.090  Sum_probs=83.1

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEec
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTD  208 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~  208 (262)
                      .+++||+|.|+|++++.+||+++|||++....+    ......+..+  .....+.+.........+...++.||+|.|+
T Consensus        11 ~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~----~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~HiAf~V~   84 (170)
T d1zswa2          11 QGMGSVELTVRRLDKMASTLTEIFGYTEVSRND----QEAIFQSIKG--EAFGEIVVKYLDGPTEKPGRGSIHHLAIRVK   84 (170)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS----SEEEEESSTT--CSTTCEEEEECCSSBCBCCBTCEEEEEEEES
T ss_pred             CCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecC----ceEEEEeccC--ccceEEEeccccccccccCccccceEEEEeC
Confidence            579999999999999999999999999987643    1222222222  2222233332222222222347899999997


Q ss_pred             C---HHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecc
Q 024779          209 D---VYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNV  255 (262)
Q Consensus       209 d---l~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  255 (262)
                      |   ++++.++++++|+++. ++.++.+  ++.+||+|||||.|||+..+
T Consensus        85 ~~~~l~~~~~~l~~~G~~~~-~~~~~~~--~~s~Yf~DPdG~~iEl~t~~  131 (170)
T d1zswa2          85 NDAELAYWEEQVKQRGFHSS-GIIDRFY--FKSLYFRESNGILFEIATDG  131 (170)
T ss_dssp             SHHHHHHHHHHHHHTTCCCC-CCEECSS--EEEEEEECTTCCEEEEEEEE
T ss_pred             ChHHHHHHHHHHHhcCCCcc-ccccCCC--EEEEEEECCCCcEEEEEECC
Confidence            5   7788899999999974 4444444  67899999999999998753

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.79  E-value=1.8e-18  Score=125.80  Aligned_cols=144  Identities=15%  Similarity=0.191  Sum_probs=98.8

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCH
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDV   80 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~   80 (262)
                      |+||+|.|+|++++++||+++|||++..+...........++..+......  .....      ....++.|+++.+.+.
T Consensus         6 ldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------~~~~~~~h~~~~~~~~   77 (162)
T d1mpya2           6 FDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDV--AFIHH------PEKGRLHHVSFHLETW   77 (162)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCSE--EEEEC------SSSSEEEEEEEECSCH
T ss_pred             ccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeecccccccc--ccccc------CCCCccceeEEEEeee
Confidence            589999999999999999999999998776544444444444443322211  12111      1234688999999975


Q ss_pred             H---HHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCCCCC-CceeEEeeecChhhhHHHHHHhc
Q 024779           81 A---KTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPE-PLCQVMLRVGDLDRSINFYEQAF  152 (262)
Q Consensus        81 ~---~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~~~~-~~~~v~l~v~d~~~~~~FY~~~l  152 (262)
                      +   +++++|++.|+++..+|.....+..+++||+|||||.|||+....... ....+........+++.||.+.|
T Consensus        78 ~~~~~~~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~~~~~~p~~~p~~w~~~~~~~~~~~~~r~l  153 (162)
T d1mpya2          78 EDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGDYNYPDHKPVTWTTDQLGKAIFYHDRIL  153 (162)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCCBCCTTSCCEEEEGGGHHHHHCTTTCSC
T ss_pred             hhhhhHHHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEECCcccCCCCCCccCCHHHCCceeEecCCCC
Confidence            5   678999999999887776666567789999999999999997654221 11223333445555555555543

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.79  E-value=9.8e-19  Score=128.16  Aligned_cols=117  Identities=22%  Similarity=0.227  Sum_probs=82.1

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCC-
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD-   79 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d-   79 (262)
                      |+||+|.|+|++++++||+++|||++..+.+    . ...+.......... +.+.............+++||+|.|+| 
T Consensus        13 l~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~----~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~HiAf~V~~~   86 (170)
T d1zswa2          13 MGSVELTVRRLDKMASTLTEIFGYTEVSRND----Q-EAIFQSIKGEAFGE-IVVKYLDGPTEKPGRGSIHHLAIRVKND   86 (170)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEECS----S-EEEEESSTTCSTTC-EEEEECCSSBCBCCBTCEEEEEEEESSH
T ss_pred             eeeEEEEeCCHHHHHHHHHHHhCCEEEeecC----c-eEEEEeccCccceE-EEeccccccccccCccccceEEEEeCCh
Confidence            5899999999999999999999999987643    1 12233222222222 222222222222333478999999986 


Q ss_pred             --HHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCC
Q 024779           80 --VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  126 (262)
Q Consensus        80 --~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~  126 (262)
                        ++++++++.+.|+++. ++.  ..+..+++||+|||||.|||+...+
T Consensus        87 ~~l~~~~~~l~~~G~~~~-~~~--~~~~~~s~Yf~DPdG~~iEl~t~~p  132 (170)
T d1zswa2          87 AELAYWEEQVKQRGFHSS-GII--DRFYFKSLYFRESNGILFEIATDGP  132 (170)
T ss_dssp             HHHHHHHHHHHHTTCCCC-CCE--ECSSEEEEEEECTTCCEEEEEEEEE
T ss_pred             HHHHHHHHHHHhcCCCcc-ccc--cCCCEEEEEEECCCCcEEEEEECCC
Confidence              7788999999999875 322  2346788999999999999997543

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.79  E-value=8.2e-19  Score=125.49  Aligned_cols=117  Identities=18%  Similarity=0.158  Sum_probs=88.7

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEec
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTD  208 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~  208 (262)
                      .+++||.|.|+|++++++||+++|||++.....  +  .  .++.......+..+.+..       ...++..|++|.+.
T Consensus        15 ~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~--~--~--~~~~~~~~~~~~~~~~~~-------~~~~~~~h~~~~~~   81 (146)
T d1f1ua1          15 VRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE--N--T--IYLRSLEEFIHHNLVLRQ-------GPIAAVAAFAYRVK   81 (146)
T ss_dssp             EEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS--S--E--EEEECTTCCSSCSEEEEE-------CSSCEEEEEEEEES
T ss_pred             cEEeEEEEEeCCHHHHHHHHHhccCcEEEeecC--C--c--eeeecccccccceeeccc-------cCCCCCceeeEeec
Confidence            479999999999999999999999999987533  1  1  222212222233333322       22468899999985


Q ss_pred             ---CHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccccc
Q 024779          209 ---DVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDFL  258 (262)
Q Consensus       209 ---dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~~  258 (262)
                         |+++++++|+++|+++...+.....+.++.+|++|||||.|||+...+..
T Consensus        82 ~~~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~e~~  134 (146)
T d1f1ua1          82 SPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYETEHV  134 (146)
T ss_dssp             SHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBCCC
T ss_pred             cchhHHHHHHHHHHcCCceeeccccccCCceEEEEEECCCCcEEEEEEecccc
Confidence               78899999999999999888777776668999999999999999876543

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=5.2e-19  Score=127.04  Aligned_cols=129  Identities=16%  Similarity=0.216  Sum_probs=96.6

Q ss_pred             CceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcc-------cccCCceeE
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD-------YDKGNAYAQ  202 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-------~~~~~~~~~  202 (262)
                      +++||.+.|+|++++.+||+++|||++......+........+...  .....+.|........       ..+++++.|
T Consensus        11 ~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~g~G~~h   88 (149)
T d1sqia1          11 HFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIK--QGKIVFVLCSALNPWNKEMGDHLVKHGDGVKD   88 (149)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEE--ETTEEEEEEEESSTTCHHHHHHHHHHCSEEEE
T ss_pred             eEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEec--CCcEEEEEEeccCCCCchhhhhhhhCCCeEEE
Confidence            6899999999999999999999999998765544333222222222  1345555554332221       224679999


Q ss_pred             EEEEecCHHHHHHHHHHhCCeeecCCccCCC--CcceEEEEeCCCCcEEEEEeccccccc
Q 024779          203 IAIGTDDVYKTAEAIKLFGGKVTREPGPLPG--INTKITACLDPDGWKTVFVDNVDFLKE  260 (262)
Q Consensus       203 i~~~v~dl~~~~~~l~~~g~~~~~~~~~~~~--~~~~~~~~~DP~G~~ie~~~~~~~~~~  260 (262)
                      |+|.|+|+++++++|+++|++++.+|.....  |..++++++.|.|..++|+|+..+.++
T Consensus        89 iaf~V~di~~~~~~l~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~~~~g~  148 (149)
T d1sqia1          89 IAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKINYTGR  148 (149)
T ss_dssp             EEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESCCSS
T ss_pred             EEEEeccHHHHHHHHHHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeCCCcCC
Confidence            9999999999999999999999998866533  333578899999999999999998764

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=3.6e-18  Score=126.06  Aligned_cols=125  Identities=33%  Similarity=0.565  Sum_probs=89.2

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCC-----------------CceeEEEeeecC---C
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPE-----------------DSHFVIELTYNY---G   60 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~l~~~~~~---~   60 (262)
                      |+|++|.|+|+++|++||+++|||++......+.......+...+..                 .....+......   .
T Consensus        24 l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (176)
T d1qipa_          24 LQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDE  103 (176)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTGGGCT
T ss_pred             EeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccccceeEEEeecccccc
Confidence            58999999999999999999999999877665555545554433221                 011111222111   1


Q ss_pred             CCC----CCCCCCceeEEEEeCCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCCC
Q 024779           61 VDK----YDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  127 (262)
Q Consensus        61 ~~~----~~~~~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~~  127 (262)
                      ...    .....|+.|+++.++|+++++++|+++|+++..+|....  ....+|++|||||.|||+|...-
T Consensus       104 ~~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l~~~Gv~~~~~p~~g~--~~~~~f~~DPdG~~IElvq~~~~  172 (176)
T d1qipa_         104 TQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGK--MKGLAFIQDPDGYWIEILNPNKM  172 (176)
T ss_dssp             TCCCBCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCEEEECTTSSS--STTCEEEECTTCCEEEEECTTTG
T ss_pred             CcCccCCCCCccceeEEEeeHHHHHHHHHHHHHCCCEEeeCCccCC--ceEEEEEECCCCCEEEEEeCCCC
Confidence            111    113358899999999999999999999999998876544  34557889999999999997653

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.78  E-value=3.6e-18  Score=120.65  Aligned_cols=125  Identities=42%  Similarity=0.758  Sum_probs=90.5

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEec
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTD  208 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~  208 (262)
                      .++.||+|.|+|++++++||+++|||++.............................................++++.++
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGVE   81 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEEES
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeecccccccccccccccccCcccccCCCccceeeeehh
Confidence            57899999999999999999999999998876655544444444333222222222222222222334457788999999


Q ss_pred             CHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccccc
Q 024779          209 DVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDFL  258 (262)
Q Consensus       209 dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~~  258 (262)
                      ++.++++++...++++...+.     ..+++|++|||||.|||++..+..
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~-----g~~~~~~~DPdGn~iEl~~~~~~~  126 (139)
T d2c21a1          82 DVKELVADMRKHDVPIDYEDE-----SGFMAFVVDPDGYYIELLNEKTMM  126 (139)
T ss_dssp             CHHHHHHHHHHTTCCEEEECS-----SSSEEEEECTTSCEEEEEEHHHHH
T ss_pred             hHHHHHHHHHHcCCceeeCCC-----CcEEEEEECCCCCEEEEEECCCCC
Confidence            999999999999998876542     247899999999999999977643

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.77  E-value=1.8e-18  Score=121.36  Aligned_cols=110  Identities=19%  Similarity=0.237  Sum_probs=85.0

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCC-
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD-   79 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d-   79 (262)
                      |+||+|.|+|++++++||+++|||++..+.+      ...+++.+.....+  .+...       ...++.|++|.|.+ 
T Consensus         5 l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~l--~l~~~-------~~~~~~h~~f~v~~~   69 (131)
T d1lgta1           5 LGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRIDSRAWRI--AVQQG-------EVDDLAFAGYEVADA   69 (131)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSE--EEEEC-------TTCEEEEEEEEESSH
T ss_pred             ccEEEEEeCCHHHHHHHHHHhhCCceeecCC------cceEEeecCCceEE--EEecC-------CCCCceEEEEEEccH
Confidence            5899999999999999999999999987754      46677776544333  33322       12477899999964 


Q ss_pred             --HHHHHHHHHHcCCeeecCCccc--CCCCeEEEEEECCCCCEEEEEEcC
Q 024779           80 --VAKTVELIKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        80 --~~~~~~~l~~~G~~~~~~~~~~--~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                        +++++++|+++|+++...+...  ..+..+.+||.|||||.||++...
T Consensus        70 ~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~~~  119 (131)
T d1lgta1          70 AGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGA  119 (131)
T ss_dssp             HHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             HHHHHHHHHHHHcCCceEECCccccccCCceEEEEEECCCCCEEEEEeCC
Confidence              7789999999999997666432  224667899999999999998543

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.77  E-value=1.4e-18  Score=122.99  Aligned_cols=120  Identities=20%  Similarity=0.314  Sum_probs=86.9

Q ss_pred             EEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecC---H
Q 024779          134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDD---V  210 (262)
Q Consensus       134 v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~d---l  210 (262)
                      |.+.|+|++++++||+++|||++..+..... .+.+.++...  .....+.+.......+...+.+..|++|.|.+   +
T Consensus        13 Va~pv~Dle~s~~FY~~vLG~~~~~~~~~~~-~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~hlaf~v~~~~dv   89 (137)
T d1twua_          13 IARPTGQLDEIIRFYEEGLCLKRIGEFSQHN-GYDGVMFGLP--HADYHLEFTQYEGGSTAPVPHPDSLLVFYVPNAVEL   89 (137)
T ss_dssp             EEEECSCHHHHHHHHTTTSCCCEEEEEEEET-TEEEEEEESS--SSSEEEEEEEETTCCCCCCCCTTCEEEEECCCHHHH
T ss_pred             EecccCCHHHHHHHHHhccCCceeeeecccc-ceeEEEecCC--CCceeeecccccccccccccccCceEEEEeCCHHHH
Confidence            3444579999999999999999987654332 3455555543  24466666665544444445567899998865   7


Q ss_pred             HHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccccc
Q 024779          211 YKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDFL  258 (262)
Q Consensus       211 ~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~~  258 (262)
                      ++++++|+++|+++..++..  .+..+.+||+||||++|||+..+...
T Consensus        90 ~~~~~~l~~~G~~~~~~~~~--~~~~~~~~f~DPDG~~Iel~~~~~~~  135 (137)
T d1twua_          90 AAITSKLKHMGYQEVESENP--YWSNGGVTIEDPDGWRIVFMNSKGIS  135 (137)
T ss_dssp             HHHHHHHHHTTCCEECCSSH--HHHSSEEEEECTTCCEEEEESSCCCC
T ss_pred             HHHHHHHHHCCCeEeCCCCC--CCCceEEEEECCCCCEEEEEcCCCCc
Confidence            88889999999999876542  22247899999999999999876543

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.77  E-value=2.7e-18  Score=122.63  Aligned_cols=119  Identities=14%  Similarity=0.205  Sum_probs=85.8

Q ss_pred             CceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEE---
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIG---  206 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~---  206 (262)
                      +|+||.|.|+|++++++||+++|||++..+....    ...... ........+.+..       ...++..|+++.   
T Consensus         7 rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~   74 (145)
T d1mpya1           7 RPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQG----RVYLKA-WTEVDKFSLVLRE-------ADEPGMDFMGFKVVD   74 (145)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEECTTS----CEEEEC-TTCCBSCSEEEEE-------CSSCEEEEEEEEESC
T ss_pred             EeeeEEEEeCCHHHHHHHHHHhhCCEEEEeeccC----ccceec-ccccceeeccccc-------cCcccceeeeeeehh
Confidence            6899999999999999999999999988653321    111111 1122233333332       122455666665   


Q ss_pred             ecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEeccccccc
Q 024779          207 TDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDFLKE  260 (262)
Q Consensus       207 v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~~~~  260 (262)
                      ++|++++.++|+++|+++...|.....+.++.+||+|||||.|||++..+..++
T Consensus        75 ~~dl~~~~~~L~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~~~e~~~~  128 (145)
T d1mpya1          75 EDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADKEYTGK  128 (145)
T ss_dssp             HHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBCBCCS
T ss_pred             HHHHHHHHHHHHHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEEeccccCC
Confidence            468999999999999999888876666656899999999999999998776543

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.77  E-value=2.9e-18  Score=122.32  Aligned_cols=125  Identities=19%  Similarity=0.331  Sum_probs=86.1

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeee--cCCCceeEEEeeecCCCCC--------CCCCCCc
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGY--GPEDSHFVIELTYNYGVDK--------YDIGTGF   70 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~--------~~~~~~~   70 (262)
                      |+||+|.|+|+++|++||+++||++...............+...  ........+++........        ...+.|+
T Consensus         8 i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~g~   87 (145)
T d1jc4a_           8 IDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNGRAGL   87 (145)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTTCCEE
T ss_pred             EeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhcccCcccccccccCCCCcc
Confidence            68999999999999999999999998876544443333332211  0112233556554322211        1235689


Q ss_pred             eeEEEEeCCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEE--ECCCCCEEEEEEcC
Q 024779           71 GHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFI--EDPDGYKFELLERG  125 (262)
Q Consensus        71 ~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~--~DP~G~~iel~~~~  125 (262)
                      .|+||.|+|+++++++|+++|+++..++.....++.+.+|+  .||+|+.|||+|.+
T Consensus        88 ~Hia~~v~di~~~~~~l~~~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          88 HHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             EEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             eEEEEecchHHHHHHHHHHCCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEECC
Confidence            99999999999999999999999865432222234555555  58899999999863

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.77  E-value=1.5e-18  Score=126.40  Aligned_cols=128  Identities=17%  Similarity=0.213  Sum_probs=97.3

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccc--eeeeeccCCCCcceEEEEeeecCCcc----------ccc
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKY--TIAMMGYGPEDKNVVLELTYNYGVTD----------YDK  196 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~----------~~~  196 (262)
                      .+++||.+.|+|++++++||+++|||++......+....  ....+..    +...+.|........          ...
T Consensus         6 ~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~----~~~~i~l~~~~~~~~~~~~~~~~~~~~~   81 (163)
T d1t47a1           6 KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTN----GSARFVLTSVIKPATPWGHFLADHVAEH   81 (163)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEE----TTEEEEEEEESSCCSHHHHHHHHHHHHH
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEec----CCEEEEEeccCCCCCccccccchhhhcC
Confidence            479999999999999999999999999987654433322  2233332    346666666433221          224


Q ss_pred             CCceeEEEEEecCHHHHHHHHHHhCCeeecCCccCCC--CcceEEEEeCCCCcEEEEEeccccccc
Q 024779          197 GNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPG--INTKITACLDPDGWKTVFVDNVDFLKE  260 (262)
Q Consensus       197 ~~~~~~i~~~v~dl~~~~~~l~~~g~~~~~~~~~~~~--~~~~~~~~~DP~G~~ie~~~~~~~~~~  260 (262)
                      +.|+.||+|.|+|+++++++|+++|++++.+|....+  |..+++++++|+|..++|+|+..+.+.
T Consensus        82 g~G~~hiaf~VdDid~a~~~l~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier~~~~g~  147 (163)
T d1t47a1          82 GDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTGYDGP  147 (163)
T ss_dssp             CSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEEECSS
T ss_pred             CCceEEEEEeeCCHHHHHHHHHHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEeccCCCCc
Confidence            6799999999999999999999999999999866543  333678999999999999998776543

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.76  E-value=4e-18  Score=119.09  Aligned_cols=117  Identities=19%  Similarity=0.149  Sum_probs=84.1

Q ss_pred             CceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeee------cCCcccccCCceeEE
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYN------YGVTDYDKGNAYAQI  203 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~i  203 (262)
                      +|+|++|.|+|++++++||++ |||.+........  +.  .+...   ....+.+...      .+..+.....+..|+
T Consensus         2 ri~hv~l~V~D~~~s~~FY~~-Lg~~~~~~~~~~~--~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   73 (128)
T d1klla_           2 RISLFAVVVEDMAKSMEFYRK-MGVEIPAEADSAP--HT--EAVLD---GGIRLAWDTVETVRSYDPEWQAPTGGHRFAI   73 (128)
T ss_dssp             CCCEEEEEESCHHHHHHHHHH-TTCCCCTTGGGCS--EE--EEECG---GGCEEEEEEHHHHHHHCTTCCCCCSSCSCEE
T ss_pred             eEeEEEEEcCCHHHHHHHHHH-hCCcccccccccc--ce--eeecc---ceeeeeecccccccccCCCCCCCccccceeE
Confidence            689999999999999999976 8998866543222  22  22211   2233434321      111112233456799


Q ss_pred             EEEecC---HHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecc
Q 024779          204 AIGTDD---VYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNV  255 (262)
Q Consensus       204 ~~~v~d---l~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  255 (262)
                      +|.|.+   +++++++|+++|+++..+|...++|. +.+|++|||||.|||++.-
T Consensus        74 ~~~v~~~~~l~~~~~~l~~~G~~~~~~p~~~~~G~-~~~~~~DPdG~~iel~~p~  127 (128)
T d1klla_          74 AFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQ-RYAIVKDPDGNVVDLFAPL  127 (128)
T ss_dssp             EEECSSHHHHHHHHHHHHHTTCEEEEEEEECTTSE-EEEEEECTTSCEEEEEEEC
T ss_pred             eeeeccchhhHHHHHHHHhccCccccCCeEcCCCc-EEEEEECCCCCEEEEEecC
Confidence            999876   77789999999999999998888764 8899999999999999753

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.76  E-value=4.3e-18  Score=119.27  Aligned_cols=116  Identities=16%  Similarity=0.168  Sum_probs=82.2

Q ss_pred             CceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCc-cceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEe-
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEY-KYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGT-  207 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v-  207 (262)
                      +|+|++|.|+|++++.+||+++|||++......... .....++..    ....+.+....    ....++..|++|.+ 
T Consensus         4 ~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~----~~~~~~~~~~~f~v~   75 (130)
T d1r9ca_           4 GLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLI----GDIWVAIMQGE----KLAERSYNHIAFKID   75 (130)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEE----TTEEEEEEECC----CCSSCCSCEEEEECC
T ss_pred             cEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEec----CCEEEeecccc----cccccceeeeeeccc
Confidence            589999999999999999999999999876543321 122223332    23444444322    22345678888876 


Q ss_pred             -cCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEec
Q 024779          208 -DDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDN  254 (262)
Q Consensus       208 -~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  254 (262)
                       +|+++++++|+++|+++..++....+ .++.+|++|||||+|||...
T Consensus        76 ~~dv~~~~~~l~~~gv~i~~~~~~~~~-~~~~~~~~DPdGn~iEl~~~  122 (130)
T d1r9ca_          76 DADFDRYAERVGKLGLDMRPPRPRVEG-EGRSIYFYDDDNHMFELHTG  122 (130)
T ss_dssp             GGGHHHHHHHHHHHTCCBCCCCC------CCEEEEECTTSCEEEEECC
T ss_pred             HHHHHHHHHHHHHCCCeEecCCcccCC-CEEEEEEECCCCCEEEEEEC
Confidence             58999999999999999876644443 35889999999999999764

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=2.4e-18  Score=123.46  Aligned_cols=126  Identities=18%  Similarity=0.258  Sum_probs=91.9

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCC-------CCCCCCceeE
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDK-------YDIGTGFGHF   73 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-------~~~~~~~~~i   73 (262)
                      |+||+|.|+|+++|++||+++|||++..+...+.......++.+......+  ++........       ...+.|+.||
T Consensus        12 ~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~g~G~~hi   89 (149)
T d1sqia1          12 FHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVF--VLCSALNPWNKEMGDHLVKHGDGVKDI   89 (149)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEE--EEEEESSTTCHHHHHHHHHHCSEEEEE
T ss_pred             EeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCCcEEE--EEEeccCCCCchhhhhhhhCCCeEEEE
Confidence            589999999999999999999999998876554443334444443333333  3333221111       1146799999


Q ss_pred             EEEeCCHHHHHHHHHHcCCeeecCCcccCC--CCeEEEEEECCCCCEEEEEEcCCCC
Q 024779           74 GIAVDDVAKTVELIKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLERGPTP  128 (262)
Q Consensus        74 ~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~--~~~~~~~~~DP~G~~iel~~~~~~~  128 (262)
                      ||.|+|+++++++|+++|+++..+|....+  |..+++++..|+|..++|++.....
T Consensus        90 af~V~di~~~~~~l~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~~~~  146 (149)
T d1sqia1          90 AFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKINYT  146 (149)
T ss_dssp             EEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESCC
T ss_pred             EEEeccHHHHHHHHHHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeCCCc
Confidence            999999999999999999999888876543  2335677888888999999976543

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.76  E-value=8.1e-18  Score=114.83  Aligned_cols=106  Identities=19%  Similarity=0.275  Sum_probs=77.3

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCC-
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD-   79 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d-   79 (262)
                      |+||.|.|+|++++++||+++|||++..+.+.     ...++ .+..  ...+.+.....    ....+..|++|.|+| 
T Consensus         4 i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~~-----~~~~~-~~~~--~~~~~~~~~~~----~~~~~~~h~~f~v~~~   71 (113)
T d1xqaa_           4 IKHLNLTVADVVAAREFLEKYFGLTCSGTRGN-----AFAVM-RDND--GFILTLMKGKE----VQYPKTFHVGFPQESE   71 (113)
T ss_dssp             CCEEEEEESCHHHHHHHHHHHHCCEEEEEETT-----TEEEE-ECTT--CCEEEEEECSS----CCCCTTCCEEEECSSH
T ss_pred             ccEEEEEeCCHHHHHHHHHHhhCCEEEEeecC-----cceee-eecc--eeeeeeeeeec----ccccccceeeeeeccc
Confidence            68999999999999999999999999876531     23333 2332  23445544322    123466799999997 


Q ss_pred             --HHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEE
Q 024779           80 --VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  122 (262)
Q Consensus        80 --~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~  122 (262)
                        ++++.++++++|+++..++  .  +.++++||.|||||.|||.
T Consensus        72 ~~v~~~~~~l~~~G~~~~~~~--~--~~~~~~~~~DPdG~~iEi~  112 (113)
T d1xqaa_          72 EQVDKINQRLKEDGFLVEPPK--H--AHAYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             HHHHHHHHHHHHTTCCCCCCE--E--C-CEEEEEEETTTEEEEEE
T ss_pred             cchhhhhhhHHHcCCccccCC--C--CceEEEEEECCCCCEEEEE
Confidence              6678999999999875443  2  3457889999999999985

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.76  E-value=4.5e-18  Score=125.24  Aligned_cols=119  Identities=17%  Similarity=0.163  Sum_probs=90.6

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEec
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTD  208 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~  208 (262)
                      .+|+||+|.|+|++++++|| ++|||++.+.....++.....++...  ..++.+.+..       ...++..|++|.+.
T Consensus         4 ~rl~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~--~~~~~l~~~~-------~~~~~~~H~~f~~~   73 (176)
T d1f1ua2           4 VRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRK--QTVHDTALTG-------GNGPRMHHVAFATH   73 (176)
T ss_dssp             CEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESS--SSSCSEEEEE-------SSBSEEEEEEEECS
T ss_pred             eEeeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccC--ccccceeccc-------ccCCCccceeEEec
Confidence            47899999999999999999 78999998876655555555565543  2445555542       23468999999987


Q ss_pred             C---HHHHHHHHHHhCCee--ecCCccCCCCcceEEEEeCCCCcEEEEEecccc
Q 024779          209 D---VYKTAEAIKLFGGKV--TREPGPLPGINTKITACLDPDGWKTVFVDNVDF  257 (262)
Q Consensus       209 d---l~~~~~~l~~~g~~~--~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~  257 (262)
                      +   +.++.++|+++|+..  ...|+++..+.+.++|++|||||.|||+...++
T Consensus        74 ~~~~v~~~~~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~~~~  127 (176)
T d1f1ua2          74 EKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQDYY  127 (176)
T ss_dssp             SHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCCC
T ss_pred             cchhHHHHHHHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeCCcc
Confidence            5   455667999999864  456777777667889999999999999886554

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.75  E-value=3.4e-18  Score=116.31  Aligned_cols=107  Identities=13%  Similarity=0.096  Sum_probs=79.5

Q ss_pred             eEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecCHHH
Q 024779          133 QVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYK  212 (262)
Q Consensus       133 ~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~dl~~  212 (262)
                      +..|.|+|++++++||+++|||++....+    .+  ..+...   ......+....   ....+++..|++|.++|+++
T Consensus         5 ~~~l~v~d~~~a~~FY~~~lG~~~~~~~~----~~--~~~~~~---~~~~~~~~~~~---~~~~~~~~~~~~~~~~dvd~   72 (111)
T d2pjsa1           5 VANIATPEPARAQAFYGDILGMPVAMDHG----WI--VTHASP---LEAHAQVSFAR---EGGSGTDVPDLSIEVDNFDE   72 (111)
T ss_dssp             EEEEECSCGGGGHHHHTTTTCCCEEEECS----SE--EEEEEE---EEEEEEEEEES---SSBTTBCCCSEEEEESCHHH
T ss_pred             EEEEEeCCHHHHHHHHHHhhCCceeeccc----ce--eEeccc---cccceeeeccc---ccCCCCceeEEEEEecCHHH
Confidence            46799999999999999999999876543    11  222211   11111121111   12234566799999999999


Q ss_pred             HHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEE
Q 024779          213 TAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFV  252 (262)
Q Consensus       213 ~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~  252 (262)
                      ++++++++|+++..+|...++|. +.+|++||+||.||++
T Consensus        73 ~~~~l~~~g~~~~~~p~~~~~g~-~~~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          73 VHARILKAGLPIEYGPVTEAWGV-QRLFLRDPFGKLINIL  111 (111)
T ss_dssp             HHHHHHHTTCCCSEEEEECTTSC-EEEEEECTTSCEEEEE
T ss_pred             HHHHHHhhccccccCCeEcCCCc-EEEEEECCCCCEEEeC
Confidence            99999999999999998888864 8899999999999986

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.75  E-value=2.4e-18  Score=120.69  Aligned_cols=113  Identities=16%  Similarity=0.126  Sum_probs=85.6

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEec
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTD  208 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~  208 (262)
                      .+++||+|.|+|++++++||+++|||++.....      ...++..+  +.++.+.+...       ..++..|++|.|.
T Consensus         3 ~~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~--~~~~~l~l~~~-------~~~~~~h~~f~v~   67 (131)
T d1lgta1           3 RSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRID--SRAWRIAVQQG-------EVDDLAFAGYEVA   67 (131)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESS--SBSCSEEEEEC-------TTCEEEEEEEEES
T ss_pred             ccccEEEEEeCCHHHHHHHHHHhhCCceeecCC------cceEEeec--CCceEEEEecC-------CCCCceEEEEEEc
Confidence            368999999999999999999999999986533      22344433  23455655532       2458899999995


Q ss_pred             ---CHHHHHHHHHHhCCeeecCCccCC--CCcceEEEEeCCCCcEEEEEeccc
Q 024779          209 ---DVYKTAEAIKLFGGKVTREPGPLP--GINTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       209 ---dl~~~~~~l~~~g~~~~~~~~~~~--~~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                         |++++.++|+++|+++...|....  .+..+.+|++|||||.|||+-.+.
T Consensus        68 ~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~~~~  120 (131)
T d1lgta1          68 DAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGAS  120 (131)
T ss_dssp             SHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCC
T ss_pred             cHHHHHHHHHHHHHcCCceEECCccccccCCceEEEEEECCCCCEEEEEeCCC
Confidence               678899999999999998875432  223478999999999999986543

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.75  E-value=3.7e-18  Score=119.80  Aligned_cols=109  Identities=15%  Similarity=0.177  Sum_probs=84.1

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeC--
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD--   78 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~--   78 (262)
                      |+||+|.|+|++++++||+++|||++..+..      ...+++.+.....+.  +...       ...++.|++|.|.  
T Consensus         5 L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~l~--~~~~-------~~~~~~h~~f~v~~~   69 (132)
T d1kw3b1           5 LGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYRADQRAWRIA--VQPG-------ELDDLAYAGLEVDDA   69 (132)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSEE--EEEC-------TTCEEEEEEEECSSH
T ss_pred             ccEEEEEeCCHHHHHHHHHHHhCCceecccc------ceeeeeeeecceeee--eecc-------CCCCceEEEEEeccH
Confidence            6899999999999999999999999987754      467777765544333  3221       2347889999996  


Q ss_pred             -CHHHHHHHHHHcCCeeecCCcccCC--CCeEEEEEECCCCCEEEEEEc
Q 024779           79 -DVAKTVELIKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLER  124 (262)
Q Consensus        79 -d~~~~~~~l~~~G~~~~~~~~~~~~--~~~~~~~~~DP~G~~iel~~~  124 (262)
                       |++++.++++++|+++...+.....  +....+||.||+||.|||+..
T Consensus        70 ~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~~  118 (132)
T d1kw3b1          70 AALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYG  118 (132)
T ss_dssp             HHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHHHHHHcCCCceecCccccccCCcceEEEEECCCCCEEEEEEC
Confidence             4788999999999998766543321  345678999999999999854

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.75  E-value=1.8e-17  Score=115.97  Aligned_cols=115  Identities=17%  Similarity=0.264  Sum_probs=81.7

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCC-CcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeC-
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPE-EKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD-   78 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~-   78 (262)
                      |+||+|.|+|++++.+||+++|||++..+..... ......++..+.    ..+.+.....    ....+..|++|.++ 
T Consensus         5 i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~----~~~~~~~~~~f~v~~   76 (130)
T d1r9ca_           5 LSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD----IWVAIMQGEK----LAERSYNHIAFKIDD   76 (130)
T ss_dssp             EEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEETT----EEEEEEECCC----CSSCCSCEEEEECCG
T ss_pred             EeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEecCC----EEEeeccccc----ccccceeeeeecccH
Confidence            5899999999999999999999999988754322 233344554432    2334443221    22346678888775 


Q ss_pred             -CHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEc
Q 024779           79 -DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  124 (262)
Q Consensus        79 -d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  124 (262)
                       |+++++++|+++|+++..++.... ++.+.+||.|||||+|||...
T Consensus        77 ~dv~~~~~~l~~~gv~i~~~~~~~~-~~~~~~~~~DPdGn~iEl~~~  122 (130)
T d1r9ca_          77 ADFDRYAERVGKLGLDMRPPRPRVE-GEGRSIYFYDDDNHMFELHTG  122 (130)
T ss_dssp             GGHHHHHHHHHHHTCCBCCCCC------CCEEEEECTTSCEEEEECC
T ss_pred             HHHHHHHHHHHHCCCeEecCCcccC-CCEEEEEEECCCCCEEEEEEC
Confidence             799999999999999876544333 466789999999999999864

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.75  E-value=1.3e-17  Score=119.15  Aligned_cols=112  Identities=21%  Similarity=0.285  Sum_probs=85.0

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeC--
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD--   78 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~--   78 (262)
                      |+||.|.|+|++++++||+++|||++..+..      ...++.......++.+.+...       ...++.|+++.+.  
T Consensus        17 l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~-------~~~~~~h~~~~~~~~   83 (146)
T d1f1ua1          17 CAYMEIVVTDLAKSREFYVDVLGLHVTEEDE------NTIYLRSLEEFIHHNLVLRQG-------PIAAVAAFAYRVKSP   83 (146)
T ss_dssp             EEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEEC-------SSCEEEEEEEEESSH
T ss_pred             EeEEEEEeCCHHHHHHHHHhccCcEEEeecC------Cceeeecccccccceeecccc-------CCCCCceeeEeeccc
Confidence            5899999999999999999999999987643      234444333333332333221       2247889999997  


Q ss_pred             -CHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcC
Q 024779           79 -DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        79 -d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                       |+++++++|+++|+++...+.....+..+++||.||+||.|||+...
T Consensus        84 ~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~  131 (146)
T d1f1ua1          84 AEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYET  131 (146)
T ss_dssp             HHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCB
T ss_pred             hhHHHHHHHHHHcCCceeeccccccCCceEEEEEECCCCcEEEEEEec
Confidence             58889999999999987776666666678899999999999999653

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.74  E-value=1.6e-17  Score=117.32  Aligned_cols=119  Identities=21%  Similarity=0.300  Sum_probs=84.7

Q ss_pred             EEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCC---H
Q 024779            4 VVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD---V   80 (262)
Q Consensus         4 v~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d---~   80 (262)
                      |++.|+|+++|.+||+++|||++..+... ...+..+++.....  ...+.+...........+.+..|++|.|+|   +
T Consensus        13 Va~pv~Dle~s~~FY~~vLG~~~~~~~~~-~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~hlaf~v~~~~dv   89 (137)
T d1twua_          13 IARPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGLPHA--DYHLEFTQYEGGSTAPVPHPDSLLVFYVPNAVEL   89 (137)
T ss_dssp             EEEECSCHHHHHHHHTTTSCCCEEEEEEE-ETTEEEEEEESSSS--SEEEEEEEETTCCCCCCCCTTCEEEEECCCHHHH
T ss_pred             EecccCCHHHHHHHHHhccCCceeeeecc-ccceeEEEecCCCC--ceeeecccccccccccccccCceEEEEeCCHHHH
Confidence            34445899999999999999999876432 23345556655443  344555544444444445567899999886   7


Q ss_pred             HHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCCC
Q 024779           81 AKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  127 (262)
Q Consensus        81 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~~  127 (262)
                      ++++++|+++|+++..++.+.  ++.+.+||.||||++|||++....
T Consensus        90 ~~~~~~l~~~G~~~~~~~~~~--~~~~~~~f~DPDG~~Iel~~~~~~  134 (137)
T d1twua_          90 AAITSKLKHMGYQEVESENPY--WSNGGVTIEDPDGWRIVFMNSKGI  134 (137)
T ss_dssp             HHHHHHHHHTTCCEECCSSHH--HHSSEEEEECTTCCEEEEESSCCC
T ss_pred             HHHHHHHHHCCCeEeCCCCCC--CCceEEEEECCCCCEEEEEcCCCC
Confidence            788999999999988665432  245668899999999999976543

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.74  E-value=1.1e-17  Score=120.68  Aligned_cols=120  Identities=13%  Similarity=0.101  Sum_probs=86.7

Q ss_pred             CCCceeEEeeecChhhhHHHHHHhcCCeeeeeccCc---CccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEE
Q 024779          128 PEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNP---EYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIA  204 (262)
Q Consensus       128 ~~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~  204 (262)
                      +.+++|++|.|+|++++++||+++|||++......+   .......++....  .++.+.+..      .+..+++.|++
T Consensus         8 ~~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~a~~~------~~~~~gl~Hia   79 (156)
T d1kw3b2           8 DQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNG--RHHTIALAA------FPIPKRIHHFM   79 (156)
T ss_dssp             GGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSS--BSCSEEEEC------CSCSSSEEEEE
T ss_pred             CCCcceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeecc--ccceeeecc------CCCCCceeEEE
Confidence            468999999999999999999999999987654321   1222334444332  344444432      22345899999


Q ss_pred             EEecC---HHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCc-EEEEEeccc
Q 024779          205 IGTDD---VYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGW-KTVFVDNVD  256 (262)
Q Consensus       205 ~~v~d---l~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~-~ie~~~~~~  256 (262)
                      |.|++   +.++.++|+++|..+ ..|.++..+...++|++||+|+ .+|+.-...
T Consensus        80 f~v~~~ddv~~~~d~l~~~G~~~-~g~~rH~~~~~~s~Y~~DP~G~~~~E~~~~~~  134 (156)
T d1kw3b2          80 LQANTIDDVGYAFDRLDAAGRIT-SLLGRHTNDQTLSFYADTPSPMIEVEFGWGPR  134 (156)
T ss_dssp             EEBSSHHHHHHHHHHHHHTTCBC-BCSEEESSSCCEEEEEECSSTTCEEEEEECCC
T ss_pred             EECCCHHHHHHHHHHHHhcCCce-ecCcccCCCCeEEEEEECCCCCeEEEEecCCc
Confidence            99965   555789999999875 4677877666689999999998 699976543

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.74  E-value=1.6e-17  Score=113.35  Aligned_cols=107  Identities=18%  Similarity=0.166  Sum_probs=78.7

Q ss_pred             CceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecC
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDD  209 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~d  209 (262)
                      +|+||.|.|+|++++++||+++|||++..+..   .  ...++..   ..+..+.+....    ....++..|++|.|.|
T Consensus         3 ~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~---~--~~~~~~~---~~~~~~~~~~~~----~~~~~~~~h~~f~v~~   70 (113)
T d1xqaa_           3 GIKHLNLTVADVVAAREFLEKYFGLTCSGTRG---N--AFAVMRD---NDGFILTLMKGK----EVQYPKTFHVGFPQES   70 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEET---T--TEEEEEC---TTCCEEEEEECS----SCCCCTTCCEEEECSS
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCEEEEeec---C--cceeeee---cceeeeeeeeee----cccccccceeeeeecc
Confidence            58999999999999999999999999976543   1  2233331   134555555432    2233567899999976


Q ss_pred             ---HHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEE
Q 024779          210 ---VYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFV  252 (262)
Q Consensus       210 ---l~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~  252 (262)
                         ++++.++++++|+++..+|.  .+  ++.+|++|||||.|||+
T Consensus        71 ~~~v~~~~~~l~~~G~~~~~~~~--~~--~~~~~~~DPdG~~iEi~  112 (113)
T d1xqaa_          71 EEQVDKINQRLKEDGFLVEPPKH--AH--AYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             HHHHHHHHHHHHHTTCCCCCCEE--C---CEEEEEEETTTEEEEEE
T ss_pred             ccchhhhhhhHHHcCCccccCCC--Cc--eEEEEEECCCCCEEEEE
Confidence               67788999999999765442  22  47889999999999985

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.74  E-value=6e-18  Score=118.71  Aligned_cols=113  Identities=15%  Similarity=0.117  Sum_probs=85.4

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEec
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTD  208 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~  208 (262)
                      .+++||+|.|+|++++++||+++|||++.....      ...++..+  +.++.+.+..       ...++..|++|.|.
T Consensus         3 ~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~--~~~~~l~~~~-------~~~~~~~h~~f~v~   67 (132)
T d1kw3b1           3 ERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYRAD--QRAWRIAVQP-------GELDDLAYAGLEVD   67 (132)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESS--SBSCSEEEEE-------CTTCEEEEEEEECS
T ss_pred             ccccEEEEEeCCHHHHHHHHHHHhCCceecccc------ceeeeeee--ecceeeeeec-------cCCCCceEEEEEec
Confidence            478999999999999999999999999876543      22344433  2344455542       12458899999984


Q ss_pred             ---CHHHHHHHHHHhCCeeecCCccCCC--CcceEEEEeCCCCcEEEEEeccc
Q 024779          209 ---DVYKTAEAIKLFGGKVTREPGPLPG--INTKITACLDPDGWKTVFVDNVD  256 (262)
Q Consensus       209 ---dl~~~~~~l~~~g~~~~~~~~~~~~--~~~~~~~~~DP~G~~ie~~~~~~  256 (262)
                         |++++.++++++|+++...+.....  +..+.+|++||+||.|||+-.+.
T Consensus        68 ~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~~~~  120 (132)
T d1kw3b1          68 DAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGPA  120 (132)
T ss_dssp             SHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCC
T ss_pred             cHHHHHHHHHHHHHcCCCceecCccccccCCcceEEEEECCCCCEEEEEECCC
Confidence               6788999999999999987754321  12467899999999999986544

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.73  E-value=3.9e-17  Score=114.91  Aligned_cols=108  Identities=23%  Similarity=0.387  Sum_probs=77.6

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEe--C
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV--D   78 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v--~   78 (262)
                      |+||+|.|+|++++.+||+++||+++..+.+      ...++..+..    .+........  .....+..|++|.+  +
T Consensus         5 i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~------~~~~~~~~~~----~~~~~~~~~~--~~~~~~~~h~~~~~~~~   72 (134)
T d1nkia_           5 LNHLTLAVADLPASIAFYRDLLGFRLEARWD------QGAYLELGSL----WLCLSREPQY--GGPAADYTHYAFGIAAA   72 (134)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEEETTE----EEEEEECTTC--CCCCSSSCEEEEEECHH
T ss_pred             EeEEEEEeCCHHHHHHHHHHhhCCeEEEecc------ceeeeecCCe----EEEEeeeccc--cccccccccchhccccc
Confidence            6899999999999999999999999987764      3455555432    2232222111  12233445666555  6


Q ss_pred             CHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEc
Q 024779           79 DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  124 (262)
Q Consensus        79 d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  124 (262)
                      |+++++++|+++|+++..++    .+..+.+||.|||||.|||...
T Consensus        73 dl~~~~~~l~~~G~~~~~~~----~~~~~~~~f~DPdGn~iEl~~~  114 (134)
T d1nkia_          73 DFARFAAQLRAHGVREWKQN----RSEGDSFYFLDPDGHRLEAHVG  114 (134)
T ss_dssp             HHHHHHHHHHHTTCCEEECC----CSSSCEEEEECTTCCEEEEESC
T ss_pred             hHHHHHHHHHHCCCcCccCC----CcceeEEEEECCCCCEEEEEEC
Confidence            89999999999999886543    2355778999999999999753

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.72  E-value=1.3e-17  Score=121.33  Aligned_cols=124  Identities=22%  Similarity=0.285  Sum_probs=91.2

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCC----------CCCCCCc
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDK----------YDIGTGF   70 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----------~~~~~~~   70 (262)
                      |+||+|.|+|+++|++||+++|||+++.....+..........+.....  .+.+........          ...+.|+
T Consensus         8 idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~~~--~i~l~~~~~~~~~~~~~~~~~~~~~g~G~   85 (163)
T d1t47a1           8 MDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSA--RFVLTSVIKPATPWGHFLADHVAEHGDGV   85 (163)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTE--EEEEEEESSCCSHHHHHHHHHHHHHCSEE
T ss_pred             EeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecCCE--EEEEeccCCCCCccccccchhhhcCCCce
Confidence            5899999999999999999999999998765444333333333333333  344444322111          1145799


Q ss_pred             eeEEEEeCCHHHHHHHHHHcCCeeecCCcccCC--CCeEEEEEECCCCCEEEEEEcCC
Q 024779           71 GHFGIAVDDVAKTVELIKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLERGP  126 (262)
Q Consensus        71 ~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~--~~~~~~~~~DP~G~~iel~~~~~  126 (262)
                      .||||.|+|+++++++|+++|+++..+|....+  |....+++.+|+|..++|++...
T Consensus        86 ~hiaf~VdDid~a~~~l~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier~~  143 (163)
T d1t47a1          86 VDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTG  143 (163)
T ss_dssp             EEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEE
T ss_pred             EEEEEeeCCHHHHHHHHHHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEeccC
Confidence            999999999999999999999999888776533  34577889999999999998654

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.72  E-value=1.8e-17  Score=112.68  Aligned_cols=107  Identities=19%  Similarity=0.144  Sum_probs=78.1

Q ss_pred             eEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCHHH
Q 024779            3 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAK   82 (262)
Q Consensus         3 hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~~~   82 (262)
                      +..|.|+|+++|++||+++|||++....+      ....+..+..  ...+.....    ....+.+..|++|.++|+++
T Consensus         5 ~~~l~v~d~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~--~~~~~~~~~----~~~~~~~~~~~~~~~~dvd~   72 (111)
T d2pjsa1           5 VANIATPEPARAQAFYGDILGMPVAMDHG------WIVTHASPLE--AHAQVSFAR----EGGSGTDVPDLSIEVDNFDE   72 (111)
T ss_dssp             EEEEECSCGGGGHHHHTTTTCCCEEEECS------SEEEEEEEEE--EEEEEEEES----SSBTTBCCCSEEEEESCHHH
T ss_pred             EEEEEeCCHHHHHHHHHHhhCCceeeccc------ceeEeccccc--cceeeeccc----ccCCCCceeEEEEEecCHHH
Confidence            46799999999999999999999887643      1222322221  111111111    11223345679999999999


Q ss_pred             HHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEE
Q 024779           83 TVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  122 (262)
Q Consensus        83 ~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~  122 (262)
                      ++++++++|+++..+|...++ +.+.+++.||+||.|||+
T Consensus        73 ~~~~l~~~g~~~~~~p~~~~~-g~~~~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          73 VHARILKAGLPIEYGPVTEAW-GVQRLFLRDPFGKLINIL  111 (111)
T ss_dssp             HHHHHHHTTCCCSEEEEECTT-SCEEEEEECTTSCEEEEE
T ss_pred             HHHHHHhhccccccCCeEcCC-CcEEEEEECCCCCEEEeC
Confidence            999999999999888887776 567889999999999985

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.72  E-value=1.1e-16  Score=113.50  Aligned_cols=112  Identities=21%  Similarity=0.371  Sum_probs=81.6

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEe--C
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV--D   78 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v--~   78 (262)
                      |+||+|.|+|++++.+||+++|||++.....      ...++..+..  ...+.+.... ........+..|++|.+  +
T Consensus         5 l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~------~~~~~~~~~~--~~~l~~~~~~-~~~~~~~~~~~h~~~~~~~~   75 (140)
T d1npba_           5 LNHLTLAVSDLQKSVTFWHELLGLTLHARWN------TGAYLTCGDL--WVCLSYDEAR-QYVPPQESDYTHYAFTVAEE   75 (140)
T ss_dssp             EEEEEEEESCHHHHHHHHHTTSCCEEEEEET------TEEEEEETTE--EEEEEECTTC-CCCCGGGSCSCEEEEECCHH
T ss_pred             EeEEEEEeCCHHHHHHHHHHHhCCEEEEEec------cccccccccc--cceeeccccc-ccCCCcCCccceeeeechHH
Confidence            5899999999999999999999999987654      2445554432  2233332221 22222344677888887  4


Q ss_pred             CHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcC
Q 024779           79 DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        79 d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                      |+++++++|+++|+++...+.    +.++++||.|||||.|||....
T Consensus        76 d~~~~~~~l~~~Gv~~~~~~~----~~~~~~~~~DPdGn~iEi~~~~  118 (140)
T d1npba_          76 DFEPLSQRLEQAGVTIWKQNK----SEGASFYFLDPDGHKLELHVGS  118 (140)
T ss_dssp             HHHHHHHHHHHTTCCEEECCC----SSSEEEEEECTTCCEEEEEECC
T ss_pred             HHHHHHHHHHHCCCeEeecCC----CCceEEEEECCCCCEEEEEECC
Confidence            799999999999999875432    3567899999999999998653

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.72  E-value=1.6e-17  Score=121.92  Aligned_cols=127  Identities=16%  Similarity=0.078  Sum_probs=95.0

Q ss_pred             CceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCc-----------------
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVT-----------------  192 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----------------  192 (262)
                      +++||.+.|+|++++++||+++|||++....................  +...+.+.......                 
T Consensus        13 ~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (172)
T d1sp8a1          13 AFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRS--GSLSFLFTAPYAHGADAATAALPSFSAAAAR   90 (172)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEE--TTEEEEEEEECCSSCCGGGCSSTTCCHHHHH
T ss_pred             EEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEecc--CCeeeEEeeccCCCchhhhcccccCCcchhh
Confidence            78999999999999999999999999987655444333333222221  12333332211110                 


Q ss_pred             --ccccCCceeEEEEEecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecccccc
Q 024779          193 --DYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDFLK  259 (262)
Q Consensus       193 --~~~~~~~~~~i~~~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~~~  259 (262)
                        ...++.|+.||+|.|+|+++++++|+++|+++..+|.+..++ .++++++.|.+..++|+++++...
T Consensus        91 ~~~~~~g~Gi~Hiaf~VdDi~aa~~~l~~~Ga~~~~~P~~~~~g-~~~a~v~~~g~~~~~lve~~~~~~  158 (172)
T d1sp8a1          91 RFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRG-FRLAEVELYGDVVLRYVSYPDGAA  158 (172)
T ss_dssp             HHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETT-EEEEEEEEETTEEEEEEECCTTGG
T ss_pred             hhhhhcCCceEEEEEeeCcHHHHHHHHHHCcCEeccCCccCCCC-EEEEEEECCCCcEEEEEecCCCCC
Confidence              012367999999999999999999999999999999877665 488999999999999999998765

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.72  E-value=1.4e-16  Score=112.20  Aligned_cols=120  Identities=54%  Similarity=0.908  Sum_probs=84.3

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCH
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDV   80 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~   80 (262)
                      |.||+|.|+|+++|++||+++|||++..........................................+..++++.++++
T Consensus         4 ~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (139)
T d2c21a1           4 MLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGVEDV   83 (139)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEEESCH
T ss_pred             eEEEEEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeecccccccccccccccccCcccccCCCccceeeeehhhH
Confidence            57999999999999999999999999887644333333333322222222222222222233334455677899999999


Q ss_pred             HHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcC
Q 024779           81 AKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        81 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                      .++++++...+.++..++     ++..++||+|||||.|||++..
T Consensus        84 ~~~~~~~~~~~~~~~~~~-----~g~~~~~~~DPdGn~iEl~~~~  123 (139)
T d2c21a1          84 KELVADMRKHDVPIDYED-----ESGFMAFVVDPDGYYIELLNEK  123 (139)
T ss_dssp             HHHHHHHHHTTCCEEEEC-----SSSSEEEEECTTSCEEEEEEHH
T ss_pred             HHHHHHHHHcCCceeeCC-----CCcEEEEEECCCCCEEEEEECC
Confidence            999999999998876442     3567799999999999999753

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.72  E-value=4.4e-17  Score=115.51  Aligned_cols=113  Identities=22%  Similarity=0.297  Sum_probs=80.5

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEe-
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGT-  207 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v-  207 (262)
                      .+++||+|.|+|++++++||+++|||++.....      ...++...  .....+.+.... ........+..|++|.+ 
T Consensus         3 ~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~------~~~~~~~~--~~~~~l~~~~~~-~~~~~~~~~~~h~~~~~~   73 (140)
T d1npba_           3 QSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN------TGAYLTCG--DLWVCLSYDEAR-QYVPPQESDYTHYAFTVA   73 (140)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET------TEEEEEET--TEEEEEEECTTC-CCCCGGGSCSCEEEEECC
T ss_pred             CcEeEEEEEeCCHHHHHHHHHHHhCCEEEEEec------cccccccc--cccceeeccccc-ccCCCcCCccceeeeech
Confidence            468999999999999999999999999976543      11223322  123333332221 11222345677888876 


Q ss_pred             -cCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEec
Q 024779          208 -DDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDN  254 (262)
Q Consensus       208 -~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  254 (262)
                       +|+++++++|+++|+++...+.  .  .++.+|++|||||.|||...
T Consensus        74 ~~d~~~~~~~l~~~Gv~~~~~~~--~--~~~~~~~~DPdGn~iEi~~~  117 (140)
T d1npba_          74 EEDFEPLSQRLEQAGVTIWKQNK--S--EGASFYFLDPDGHKLELHVG  117 (140)
T ss_dssp             HHHHHHHHHHHHHTTCCEEECCC--S--SSEEEEEECTTCCEEEEEEC
T ss_pred             HHHHHHHHHHHHHCCCeEeecCC--C--CceEEEEECCCCCEEEEEEC
Confidence             6899999999999999976542  2  25789999999999999764

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.72  E-value=3.4e-17  Score=114.30  Aligned_cols=119  Identities=16%  Similarity=0.168  Sum_probs=81.5

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeee----cCCCCCCCCCCCceeEEEE
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTY----NYGVDKYDIGTGFGHFGIA   76 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~i~~~   76 (262)
                      |+||+|.|+|+++|++||++ ||+.+.....  ..  ....+..+. ...+.+....    .........+.+..|+++.
T Consensus         3 i~hv~l~V~D~~~s~~FY~~-Lg~~~~~~~~--~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   76 (128)
T d1klla_           3 ISLFAVVVEDMAKSMEFYRK-MGVEIPAEAD--SA--PHTEAVLDG-GIRLAWDTVETVRSYDPEWQAPTGGHRFAIAFE   76 (128)
T ss_dssp             CCEEEEEESCHHHHHHHHHH-TTCCCCTTGG--GC--SEEEEECGG-GCEEEEEEHHHHHHHCTTCCCCCSSCSCEEEEE
T ss_pred             EeEEEEEcCCHHHHHHHHHH-hCCccccccc--cc--cceeeeccc-eeeeeecccccccccCCCCCCCccccceeEeee
Confidence            68999999999999999987 8987654322  11  223333322 1222222111    1111112233355689999


Q ss_pred             eCC---HHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCC
Q 024779           77 VDD---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  126 (262)
Q Consensus        77 v~d---~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~  126 (262)
                      |.+   +++++++|+++|+++..+|....+ +.+.+|+.|||||.|||+++-|
T Consensus        77 v~~~~~l~~~~~~l~~~G~~~~~~p~~~~~-G~~~~~~~DPdG~~iel~~p~p  128 (128)
T d1klla_          77 FPDTASVDKKYAELVDAGYEGHLKPWNAVW-GQRYAIVKDPDGNVVDLFAPLP  128 (128)
T ss_dssp             CSSHHHHHHHHHHHHHTTCEEEEEEEECTT-SEEEEEEECTTSCEEEEEEECC
T ss_pred             eccchhhHHHHHHHHhccCccccCCeEcCC-CcEEEEEECCCCCEEEEEecCC
Confidence            987   677899999999999988877775 5688999999999999997643

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.71  E-value=5.7e-17  Score=114.02  Aligned_cols=110  Identities=25%  Similarity=0.306  Sum_probs=77.1

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEE--
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIG--  206 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~--  206 (262)
                      .+|+||+|.|+|++++++||+++||+++..+.+.      ...+..+    ...+........  .....+..|++|.  
T Consensus         3 ~~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~------~~~~~~~----~~~~~~~~~~~~--~~~~~~~~h~~~~~~   70 (134)
T d1nkia_           3 TGLNHLTLAVADLPASIAFYRDLLGFRLEARWDQ------GAYLELG----SLWLCLSREPQY--GGPAADYTHYAFGIA   70 (134)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEEETT------EEEEEET----TEEEEEEECTTC--CCCCSSSCEEEEEEC
T ss_pred             CcEeEEEEEeCCHHHHHHHHHHhhCCeEEEeccc------eeeeecC----CeEEEEeeeccc--cccccccccchhccc
Confidence            3689999999999999999999999999876431      1223322    223333322221  2223344555555  


Q ss_pred             ecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEec
Q 024779          207 TDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDN  254 (262)
Q Consensus       207 v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  254 (262)
                      ++|+++++++|+++|+++...+  +.+  ++.+|++|||||.|||...
T Consensus        71 ~~dl~~~~~~l~~~G~~~~~~~--~~~--~~~~~f~DPdGn~iEl~~~  114 (134)
T d1nkia_          71 AADFARFAAQLRAHGVREWKQN--RSE--GDSFYFLDPDGHRLEAHVG  114 (134)
T ss_dssp             HHHHHHHHHHHHHTTCCEEECC--CSS--SCEEEEECTTCCEEEEESC
T ss_pred             cchHHHHHHHHHHCCCcCccCC--Ccc--eeEEEEECCCCCEEEEEEC
Confidence            5799999999999999987543  222  5789999999999999763

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.71  E-value=4.7e-17  Score=118.87  Aligned_cols=125  Identities=18%  Similarity=0.238  Sum_probs=92.8

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCC-----------CCCC-----
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG-----------VDKY-----   64 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----------~~~~-----   64 (262)
                      |+||+|.|+|++++.+||+++|||++..+...+..........++.....+.+.......           ....     
T Consensus        13 ~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (167)
T d1sqda1          13 FHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTASIPSFDHG   92 (167)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGGGCCCSSTTCCHH
T ss_pred             EeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCCCeeEEEeccccccccccccccccccccccCCcc
Confidence            589999999999999999999999998876555444444444444433333333221100           0000     


Q ss_pred             -------CCCCCceeEEEEeCCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCC
Q 024779           65 -------DIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  126 (262)
Q Consensus        65 -------~~~~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~  126 (262)
                             ..+.|+.||||.|+|+++++++|+++|+++..+|....+ +.+.+++..+++..++|++...
T Consensus        93 ~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l~~~G~~~~~~P~~~~~-~~~~a~I~~~gd~~~~~v~r~~  160 (167)
T d1sqda1          93 SCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNE-AVTIAEVKLYGDVVLRYVSYKA  160 (167)
T ss_dssp             HHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT-TEEEEEEEEETTEEEEEEEECC
T ss_pred             hHHHhhhccCCCceEEEEEeCCHHHHHHHHHHCCCEEecCCeecCC-CEEEEEEEccCCcEEEEEecCC
Confidence                   024689999999999999999999999999999887764 7788889999999999998764

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.71  E-value=2.8e-17  Score=120.13  Aligned_cols=126  Identities=14%  Similarity=0.083  Sum_probs=92.3

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCc--------------c-
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVT--------------D-  193 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--------------~-  193 (262)
                      .+++||.+.|+|++++.+||+++|||++..+...+.............  ....+.+.......              + 
T Consensus        11 ~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~   88 (167)
T d1sqda1          11 KRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTS--GDLRFLFTAPYSPSLSAGEIKPTTTASIPS   88 (167)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEE--TTEEEEEEEECCGGGTTTCCGGGCCCSSTT
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeC--CCeeEEEecccccccccccccccccccccc
Confidence            478999999999999999999999999887655443333322222221  12233322211000              0 


Q ss_pred             ----------cccCCceeEEEEEecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecccc
Q 024779          194 ----------YDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDF  257 (262)
Q Consensus       194 ----------~~~~~~~~~i~~~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~  257 (262)
                                ..+++|+.||||.|+|+++++++|+++|++++.+|....++ .++++++.+.+..++|++++..
T Consensus        89 ~~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l~~~G~~~~~~P~~~~~~-~~~a~I~~~gd~~~~~v~r~~~  161 (167)
T d1sqda1          89 FDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEA-VTIAEVKLYGDVVLRYVSYKAE  161 (167)
T ss_dssp             CCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTT-EEEEEEEEETTEEEEEEEECCC
T ss_pred             CCcchHHHhhhccCCCceEEEEEeCCHHHHHHHHHHCCCEEecCCeecCCC-EEEEEEEccCCcEEEEEecCCC
Confidence                      11356999999999999999999999999999999887665 4888999999999999998753

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.70  E-value=6.8e-17  Score=118.49  Aligned_cols=126  Identities=17%  Similarity=0.169  Sum_probs=93.1

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCC------C-----------
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD------K-----------   63 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------~-----------   63 (262)
                      ++||+|.|+|++++++||+++|||+++.+.....+........++.....+.+.........      .           
T Consensus        14 ~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (172)
T d1sp8a1          14 FHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPSFSAAAARRFA   93 (172)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTTCCHHHHHHHH
T ss_pred             EEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccCCeeeEEeeccCCCchhhhcccccCCcchhhhhh
Confidence            58999999999999999999999999987655444333333333333333333222211100      0           


Q ss_pred             CCCCCCceeEEEEeCCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCCC
Q 024779           64 YDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  127 (262)
Q Consensus        64 ~~~~~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~~  127 (262)
                      ...+.|+.||||.|+|+++++++|+++|+++..+|....+ +.+.+++..|.+..++|++..+.
T Consensus        94 ~~~g~Gi~Hiaf~VdDi~aa~~~l~~~Ga~~~~~P~~~~~-g~~~a~v~~~g~~~~~lve~~~~  156 (172)
T d1sp8a1          94 ADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGR-GFRLAEVELYGDVVLRYVSYPDG  156 (172)
T ss_dssp             HHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEET-TEEEEEEEEETTEEEEEEECCTT
T ss_pred             hhcCCceEEEEEeeCcHHHHHHHHHHCcCEeccCCccCCC-CEEEEEEECCCCcEEEEEecCCC
Confidence            0135699999999999999999999999999989887765 67888889998889999998753

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.68  E-value=2.6e-16  Score=112.08  Aligned_cols=113  Identities=23%  Similarity=0.285  Sum_probs=77.7

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeC--
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD--   78 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~--   78 (262)
                      |+||.|.|+|++++++||+++|||++..+...  .   ..+........+....+....       ..+..|+++.+.  
T Consensus         8 l~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~   75 (145)
T d1mpya1           8 PGHVQLRVLDMSKALEHYVELLGLIEMDRDDQ--G---RVYLKAWTEVDKFSLVLREAD-------EPGMDFMGFKVVDE   75 (145)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEECTT--S---CEEEECTTCCBSCSEEEEECS-------SCEEEEEEEEESCH
T ss_pred             eeeEEEEeCCHHHHHHHHHHhhCCEEEEeecc--C---ccceecccccceeeccccccC-------cccceeeeeeehhH
Confidence            57999999999999999999999999876431  1   112222222222222332211       123445555554  


Q ss_pred             -CHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcC
Q 024779           79 -DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        79 -d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                       |+++++++|+++|+++...|.....+..+.+||.|||||.|||+...
T Consensus        76 ~dl~~~~~~L~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~~~  123 (145)
T d1mpya1          76 DALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADK  123 (145)
T ss_dssp             HHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCB
T ss_pred             HHHHHHHHHHHHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEEec
Confidence             68999999999999987655554445668899999999999999643

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.67  E-value=9.8e-16  Score=112.50  Aligned_cols=116  Identities=20%  Similarity=0.226  Sum_probs=83.0

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCH
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDV   80 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~   80 (262)
                      |+||+|.|+|++++++|| ++|||++..+.....+....+++..+.....  +.+...       ...+++|++|.+.++
T Consensus         6 l~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~~~~~--l~~~~~-------~~~~~~H~~f~~~~~   75 (176)
T d1f1ua2           6 LDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHD--TALTGG-------NGPRMHHVAFATHEK   75 (176)
T ss_dssp             EEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSCS--EEEEES-------SBSEEEEEEEECSSH
T ss_pred             eeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCccccc--eecccc-------cCCCccceeEEeccc
Confidence            689999999999999999 5799999876554455555556654443322  233221       134788999999964


Q ss_pred             ---HHHHHHHHHcCCeee--cCCcccCCCCeEEEEEECCCCCEEEEEEcCC
Q 024779           81 ---AKTVELIKAKGGKVT--REPGPVKGGNTVIAFIEDPDGYKFELLERGP  126 (262)
Q Consensus        81 ---~~~~~~l~~~G~~~~--~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~  126 (262)
                         .++.++|+++|+...  ..|.....+...++||.|||||+||++....
T Consensus        76 ~~v~~~~~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~~~  126 (176)
T d1f1ua2          76 HNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQDY  126 (176)
T ss_dssp             HHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCC
T ss_pred             hhHHHHHHHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeCCc
Confidence               456789999998643  2333444456678999999999999997654

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.66  E-value=1.3e-15  Score=109.57  Aligned_cols=115  Identities=24%  Similarity=0.299  Sum_probs=79.3

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCC---CCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEe
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIP---EEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV   77 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v   77 (262)
                      |+||+|.|+|++++++||+++|||++.......   .......++..+.....  +.....      +...+++|++|+|
T Consensus        11 lgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~--~a~~~~------~~~~gl~Hiaf~v   82 (156)
T d1kw3b2          11 IGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHT--IALAAF------PIPKRIHHFMLQA   82 (156)
T ss_dssp             SCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCS--EEEECC------SCSSSEEEEEEEB
T ss_pred             cceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeeccccce--eeeccC------CCCCceeEEEEEC
Confidence            689999999999999999999999987653211   11223344444333222  222211      1234799999999


Q ss_pred             CC---HHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCC-EEEEEEc
Q 024779           78 DD---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGY-KFELLER  124 (262)
Q Consensus        78 ~d---~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~-~iel~~~  124 (262)
                      ++   +.+++++|+++|+.+. .|.....+...++|+.||+|+ .+|+...
T Consensus        83 ~~~ddv~~~~d~l~~~G~~~~-g~~rH~~~~~~s~Y~~DP~G~~~~E~~~~  132 (156)
T d1kw3b2          83 NTIDDVGYAFDRLDAAGRITS-LLGRHTNDQTLSFYADTPSPMIEVEFGWG  132 (156)
T ss_dssp             SSHHHHHHHHHHHHHTTCBCB-CSEEESSSCCEEEEEECSSTTCEEEEEEC
T ss_pred             CCHHHHHHHHHHHHhcCCcee-cCcccCCCCeEEEEEECCCCCeEEEEecC
Confidence            86   5557899999998765 344444346789999999998 5898754

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.64  E-value=2.8e-15  Score=103.07  Aligned_cols=105  Identities=23%  Similarity=0.345  Sum_probs=75.5

Q ss_pred             EeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecCHHHHH
Q 024779          135 MLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTA  214 (262)
Q Consensus       135 ~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~dl~~~~  214 (262)
                      .|.|+|++++++||++ |||++.....    .+  ..+...    ...+.+......   ....+..++.+.++|+++++
T Consensus         7 ~l~v~Dl~~s~~FY~~-LGf~~~~~~~----~~--~~~~~~----~~~~~~~~~~~~---~~~~~~~~~~~~~~d~~~~~   72 (120)
T d1ecsa_           7 NLPSRDFDSTAAFYER-LGFGIVFRDA----GW--MILQRG----DLMLEFFAHPGL---DPLASWFSCCLRLDDLAEFY   72 (120)
T ss_dssp             EEEESCHHHHHHHHHT-TTCEEEEECS----SE--EEEEET----TEEEEEEECTTC---CGGGCCCEEEEEESCHHHHH
T ss_pred             EEEeCCHHHHHHHHHH-cCCeeEEecC----ce--eeeecc----eecccccccccc---ccCCCCcEEEEEECCHHHHH
Confidence            4899999999999988 9999976533    12  222211    233334332221   12235568999999999999


Q ss_pred             HHHHHhCCeeec-------CCccCCCCcceEEEEeCCCCcEEEEEec
Q 024779          215 EAIKLFGGKVTR-------EPGPLPGINTKITACLDPDGWKTVFVDN  254 (262)
Q Consensus       215 ~~l~~~g~~~~~-------~~~~~~~~~~~~~~~~DP~G~~ie~~~~  254 (262)
                      ++++++|+.+..       +|...++|. +.+||+|||||+|+|+|+
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~-r~~~~~DPDGn~iei~q~  118 (120)
T d1ecsa_          73 RQCKSVGIQETSSGYPRIHAPELQGWGG-TMAALVDPDGTLLRLIQN  118 (120)
T ss_dssp             HHHHHTTCCBCSSSSSEEEEEEECTTSS-EEEEEECTTSCEEEEEEC
T ss_pred             HHHhhhhhhhccccccccccceecCCCc-EEEEEECCCCCEEEEEEc
Confidence            999999988754       345566654 889999999999999986

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.61  E-value=1.5e-14  Score=99.31  Aligned_cols=109  Identities=23%  Similarity=0.293  Sum_probs=76.1

Q ss_pred             ceEE--EEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCC
Q 024779            2 LHVV--YRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD   79 (262)
Q Consensus         2 ~hv~--l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d   79 (262)
                      +|+.  |.|+|+++|++||++ |||++.+...      ..+++..+..    .+.+.......+   .....++++.++|
T Consensus         2 ~~~~p~l~v~Dl~~s~~FY~~-LGf~~~~~~~------~~~~~~~~~~----~~~~~~~~~~~~---~~~~~~~~~~~~d   67 (120)
T d1ecsa_           2 DQATPNLPSRDFDSTAAFYER-LGFGIVFRDA------GWMILQRGDL----MLEFFAHPGLDP---LASWFSCCLRLDD   67 (120)
T ss_dssp             CEEEEEEEESCHHHHHHHHHT-TTCEEEEECS------SEEEEEETTE----EEEEEECTTCCG---GGCCCEEEEEESC
T ss_pred             CeEEEEEEeCCHHHHHHHHHH-cCCeeEEecC------ceeeeeccee----cccccccccccc---CCCCcEEEEEECC
Confidence            3555  999999999999998 9999987643      2344443332    223332221111   1233468999999


Q ss_pred             HHHHHHHHHHcCCeeec-------CCcccCCCCeEEEEEECCCCCEEEEEEcC
Q 024779           80 VAKTVELIKAKGGKVTR-------EPGPVKGGNTVIAFIEDPDGYKFELLERG  125 (262)
Q Consensus        80 ~~~~~~~l~~~G~~~~~-------~~~~~~~~~~~~~~~~DP~G~~iel~~~~  125 (262)
                      ++++++.++++|+.+..       ++...++ +.+.++|.|||||+|+|+|..
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~r~~~~~DPDGn~iei~q~d  119 (120)
T d1ecsa_          68 LAEFYRQCKSVGIQETSSGYPRIHAPELQGW-GGTMAALVDPDGTLLRLIQNE  119 (120)
T ss_dssp             HHHHHHHHHHTTCCBCSSSSSEEEEEEECTT-SSEEEEEECTTSCEEEEEECC
T ss_pred             HHHHHHHHhhhhhhhccccccccccceecCC-CcEEEEEECCCCCEEEEEEcc
Confidence            99999999999887643       3444454 457789999999999999863

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.61  E-value=1.5e-15  Score=106.76  Aligned_cols=116  Identities=14%  Similarity=0.154  Sum_probs=78.5

Q ss_pred             eEEeeecChhhhHHHHHHhcCCeeeeeccCcCcc-------ceeeeeccCCCCcceEEEEeeec---CCcccccCCceeE
Q 024779          133 QVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYK-------YTIAMMGYGPEDKNVVLELTYNY---GVTDYDKGNAYAQ  202 (262)
Q Consensus       133 ~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~  202 (262)
                      .+.+.++|+++|.+||+++||+++..+...++..       .....+..+    ...+.+....   ...+........+
T Consensus        10 ~l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (135)
T d1xy7a_          10 MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLA----GSSFVVCDVSSLPGFSTAKSEGSGVT   85 (135)
T ss_dssp             EEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEET----TEEEEEEEGGGSTTCCCCCTTSCCCE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEEC----CeeeeccccccccccccCCCCCcceE
Confidence            4566777999999999999999987665433221       112222222    1222232211   1112222334579


Q ss_pred             EEEEecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEe
Q 024779          203 IAIGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVD  253 (262)
Q Consensus       203 i~~~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~  253 (262)
                      +++.++|++++++++.++|++++.+|...++|. +.++++||+|+.|+|.|
T Consensus        86 l~~~v~d~~~~~~~~~~~g~~~~~~~~~~~~g~-~~~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          86 FLLGTKDAEAAVAKAVDAGAVKVEVTEAEVELG-FKGKVTDPFGVTWIFAE  135 (135)
T ss_dssp             EEEECSCHHHHHHHHHHTTCEECCCCHHHHHTT-EEEEEECTTSCEEEEEC
T ss_pred             EEEeecCcceeEEEeecccceEecCcccccccC-EEEEEECCCCCEEEEeC
Confidence            999999999999999999999999999888874 88999999999999976

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.56  E-value=9.2e-15  Score=102.62  Aligned_cols=116  Identities=12%  Similarity=0.093  Sum_probs=77.9

Q ss_pred             eEEEEeCCHHHHHHHHHhhcCcEEEEEecCCC-------CcceeeEeeecCCCceeEEEeeecC---CCCCCCCCCCcee
Q 024779            3 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPE-------EKYTNAFLGYGPEDSHFVIELTYNY---GVDKYDIGTGFGH   72 (262)
Q Consensus         3 hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~   72 (262)
                      ++.+.+.|+++|.+||+++||+++..+...++       +....+.+.+++.    .+.+....   ............+
T Consensus        10 ~l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~   85 (135)
T d1xy7a_          10 MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGS----SFVVCDVSSLPGFSTAKSEGSGVT   85 (135)
T ss_dssp             EEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTE----EEEEEEGGGSTTCCCCCTTSCCCE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEECCe----eeeccccccccccccCCCCCcceE
Confidence            35566679999999999999999876543221       2233445555532    12222211   1111122223347


Q ss_pred             EEEEeCCHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEE
Q 024779           73 FGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  123 (262)
Q Consensus        73 i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~  123 (262)
                      +++.++|+++++.++.++|+++..++...++ +.+.+++.||+|+.|+|.|
T Consensus        86 l~~~v~d~~~~~~~~~~~g~~~~~~~~~~~~-g~~~~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          86 FLLGTKDAEAAVAKAVDAGAVKVEVTEAEVE-LGFKGKVTDPFGVTWIFAE  135 (135)
T ss_dssp             EEEECSCHHHHHHHHHHTTCEECCCCHHHHH-TTEEEEEECTTSCEEEEEC
T ss_pred             EEEeecCcceeEEEeecccceEecCcccccc-cCEEEEEECCCCCEEEEeC
Confidence            9999999999999999999999999888877 5677899999999999864

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.53  E-value=3.4e-14  Score=97.75  Aligned_cols=105  Identities=15%  Similarity=0.106  Sum_probs=75.3

Q ss_pred             EeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecCHHHHH
Q 024779          135 MLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKTA  214 (262)
Q Consensus       135 ~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~dl~~~~  214 (262)
                      .|.|+|++++++||+++|||++.....    .+  .++..+    ...+.+.....    .......++.+.+.|++.+.
T Consensus        10 vL~v~Dl~~s~~FY~~vLG~~~~~~~~----~~--~~~~~~----~~~l~l~~~~~----~~~~~~~~~~~~~~~i~~~~   75 (122)
T d1jifa_          10 VLTAVDVPANVSFWVDTLGFEKDFGDR----DF--AGVRRG----DIRLHISRTEH----QIVADNTSAWIEVTDPDALH   75 (122)
T ss_dssp             EEEESSHHHHHHHHHHTTCCEEEEECS----SE--EEEEET----TEEEEEEECSC----HHHHTTCEEEEEESCHHHHH
T ss_pred             EEEcCCHHHHHHHHHhhhCCceEecCC----ce--eEeeee----eeeeeeecccc----ccccceeEEEEeechhHHHH
Confidence            489999999999999999999876532    12  333322    34455554321    12235568999999999999


Q ss_pred             HHHHHhCCeeecCCcc-------CCCCcceEEEEeCCCCcEEEEEec
Q 024779          215 EAIKLFGGKVTREPGP-------LPGINTKITACLDPDGWKTVFVDN  254 (262)
Q Consensus       215 ~~l~~~g~~~~~~~~~-------~~~~~~~~~~~~DP~G~~ie~~~~  254 (262)
                      +++++++......+..       .+++ ++.+|++|||||+|||..-
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~DPdGn~ief~~~  121 (122)
T d1jifa_          76 EEWARAVSTDYADTSGPAMTPVGESPA-GREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHTTSCSCTTCTTSCEECCCEEETT-EEEEEEECTTCCEEEEEEC
T ss_pred             HHHHhhcceEEeeccccccCccccCCC-eEEEEEECCCCCEEEEEeC
Confidence            9999999886654422       1222 5889999999999999863

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.53  E-value=1e-13  Score=95.32  Aligned_cols=105  Identities=13%  Similarity=0.014  Sum_probs=74.3

Q ss_pred             EEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCHHHHH
Q 024779            5 VYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTV   84 (262)
Q Consensus         5 ~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~~~~~   84 (262)
                      .|.|+|+++|++||+++|||++....+      ..+++..+..    .+.+.......    .....++.+.+.|+++++
T Consensus        10 vL~v~Dl~~s~~FY~~vLG~~~~~~~~------~~~~~~~~~~----~l~l~~~~~~~----~~~~~~~~~~~~~i~~~~   75 (122)
T d1jifa_          10 VLTAVDVPANVSFWVDTLGFEKDFGDR------DFAGVRRGDI----RLHISRTEHQI----VADNTSAWIEVTDPDALH   75 (122)
T ss_dssp             EEEESSHHHHHHHHHHTTCCEEEEECS------SEEEEEETTE----EEEEEECSCHH----HHTTCEEEEEESCHHHHH
T ss_pred             EEEcCCHHHHHHHHHhhhCCceEecCC------ceeEeeeeee----eeeeecccccc----ccceeEEEEeechhHHHH
Confidence            589999999999999999999987643      2455555432    33444322111    123346899999999999


Q ss_pred             HHHHHcCCeeecCCc-------ccCCCCeEEEEEECCCCCEEEEEEc
Q 024779           85 ELIKAKGGKVTREPG-------PVKGGNTVIAFIEDPDGYKFELLER  124 (262)
Q Consensus        85 ~~l~~~G~~~~~~~~-------~~~~~~~~~~~~~DP~G~~iel~~~  124 (262)
                      +++++++......+.       ... .+.+.+|+.|||||+|||...
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~DPdGn~ief~~~  121 (122)
T d1jifa_          76 EEWARAVSTDYADTSGPAMTPVGES-PAGREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHTTSCSCTTCTTSCEECCCEEE-TTEEEEEEECTTCCEEEEEEC
T ss_pred             HHHHhhcceEEeeccccccCccccC-CCeEEEEEECCCCCEEEEEeC
Confidence            999999876643322       112 356889999999999999863

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.52  E-value=9.9e-14  Score=94.98  Aligned_cols=105  Identities=16%  Similarity=0.112  Sum_probs=73.0

Q ss_pred             EEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecCHHHH
Q 024779          134 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDDVYKT  213 (262)
Q Consensus       134 v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~dl~~~  213 (262)
                      -.|.|+|++++++||+++|||++......    +  ..+..+    ...+.+.....    ....+..++.+.+.+++..
T Consensus         8 pvL~v~D~~~s~~FY~~~LG~~~~~~~~~----~--~~~~~~----~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~   73 (120)
T d1xrka_           8 PVLTARDVAEAVEFWTDRLGFSRVFVEDD----F--AGVVRD----DVTLFISAVQD----QVVPDNTQAWVWVRGLDEL   73 (120)
T ss_dssp             EEEEESCHHHHHHHHHHTTCCEEEEECSS----E--EEEEET----TEEEEEEECSC----TTTGGGCEEEEEEECHHHH
T ss_pred             EEEEECCHHHHHHHHHHhhCCeEEEECCC----e--eEEecc----cceeecccccc----ccCCCCceEEEeeccHHHH
Confidence            45899999999999999999999876431    2  222222    23444443221    1234567888999999998


Q ss_pred             HHHHHHhCCeee--------cCCccCCCCcceEEEEeCCCCcEEEEEec
Q 024779          214 AEAIKLFGGKVT--------REPGPLPGINTKITACLDPDGWKTVFVDN  254 (262)
Q Consensus       214 ~~~l~~~g~~~~--------~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  254 (262)
                      .+.+.++.....        .++.++++  ++.+|++|||||.|||++.
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~DPdGn~ief~~e  120 (120)
T d1xrka_          74 YAEWSEVVSTNFRDASGPAMTEIVEQPW--GREFALRDPAGNCVHFVAE  120 (120)
T ss_dssp             HHHHTTTSBSCTTTCSSCEECCCEEETT--EEEEEEECTTCCEEEEEEC
T ss_pred             HHHHHHhhhHHhhhcccccccCceecCC--EEEEEEECCCCCEEEEEEC
Confidence            888776655543        34445555  5789999999999999863

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.49  E-value=1.4e-13  Score=97.74  Aligned_cols=118  Identities=10%  Similarity=0.075  Sum_probs=87.7

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcc----cccCCceeEEE
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD----YDKGNAYAQIA  204 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~i~  204 (262)
                      .+|+||.+.|+|++++.+||++ |||+...+.....    ...+..    +...+.+........    ..+++|+.||+
T Consensus         8 ~Gidhv~fav~d~~~~~~~~~~-lGF~~~~~~~~~~----~~l~~~----G~i~ll~~~~~~s~~~~~~~~hg~gv~hia   78 (150)
T d1cjxa1           8 MGFEFIEFASPTPGTLEPIFEI-MGFTKVATHRSKN----VHLYRQ----GEINLILNNEPNSIASYFAAEHGPSVCGMA   78 (150)
T ss_dssp             EEEEEEEEECSSTTSSHHHHHH-TTCEEEEEESSSS----EEEEEE----TTEEEEEECCSSSHHHHHHHHHSSEEEEEE
T ss_pred             CCEEEEEEecCCHHHHHHHHHH-hCCEEEecccceE----EEEEec----CcEEEEecCCCCCHhHhHHhhCCCceEEEE
Confidence            4799999999999999999976 9999987654322    222221    234444433221111    33678999999


Q ss_pred             EEecCHHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecccc
Q 024779          205 IGTDDVYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDF  257 (262)
Q Consensus       205 ~~v~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~  257 (262)
                      |.|+|+++++++++++|++++..|...  +...+..++.|+|.++.|+++.+.
T Consensus        79 f~V~D~~~a~~~a~~~Ga~~i~~~~~~--g~~~~~~i~g~gg~~i~Fv~~~~~  129 (150)
T d1cjxa1          79 FRVKDSQKAYNRALELGAQPIHIDTGP--MELNLPAIKGIGGAPLYLIDRFGE  129 (150)
T ss_dssp             EEESCHHHHHHHHHHTTCCBCCCCCCT--TCBCCCEEECGGGCEEEEECCCSS
T ss_pred             EEeCCHHHHHHHHHHCCCEEcccCCCC--CceeeeEEEcCCCCEEEEECcCCC
Confidence            999999999999999999988776432  224678899999999999998764

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.44  E-value=1.5e-13  Score=102.29  Aligned_cols=99  Identities=21%  Similarity=0.197  Sum_probs=72.8

Q ss_pred             CceeEEeeec--ChhhhHHHHHHhcCCeeeeeccCcCccceeeeeccCCCCcceEEEEeeecCCcc--------cccCCc
Q 024779          130 PLCQVMLRVG--DLDRSINFYEQAFGMELLRKRDNPEYKYTIAMMGYGPEDKNVVLELTYNYGVTD--------YDKGNA  199 (262)
Q Consensus       130 ~~~~v~l~v~--d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--------~~~~~~  199 (262)
                      +|+||+++|+  |+++++.||+++|||+.....+.++....+......+......+.+........        ...++|
T Consensus         5 ~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~~~~~~~~l~~~~~~~~sqi~~fl~~~~g~G   84 (203)
T d1cjxa2           5 VIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQFNGEG   84 (203)
T ss_dssp             EEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHHHTSSB
T ss_pred             eeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeeccccccceecccCCCCCccHHHHHHHhcCCCC
Confidence            6899999998  999999999999999998765544333333333223333445555554332221        124689


Q ss_pred             eeEEEEEecCHHHHHHHHHHhCCeeecCC
Q 024779          200 YAQIAIGTDDVYKTAEAIKLFGGKVTREP  228 (262)
Q Consensus       200 ~~~i~~~v~dl~~~~~~l~~~g~~~~~~~  228 (262)
                      ++||||.|+|+.+++++|+++|++++..|
T Consensus        85 iqHIAf~vdDI~aav~~L~~~Gv~fL~~p  113 (203)
T d1cjxa2          85 IQHVAFLTDDLVKTWDALKKIGMRFMTAP  113 (203)
T ss_dssp             CCEEEEEESCHHHHHHHHHHTTCCBCCCC
T ss_pred             CceEEEEeCCHHHHHHHHHhcCCccccCc
Confidence            99999999999999999999999999866

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.44  E-value=6.6e-14  Score=99.43  Aligned_cols=118  Identities=10%  Similarity=0.071  Sum_probs=83.5

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCC--CCCCCCceeEEEEeC
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDK--YDIGTGFGHFGIAVD   78 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~i~~~v~   78 (262)
                      |+||.|.|+|++++.+||++ |||+.+.+...    .....+.-+  ...+.+.....+....  ...+.|++||+|+|+
T Consensus        10 idhv~fav~d~~~~~~~~~~-lGF~~~~~~~~----~~~~l~~~G--~i~ll~~~~~~s~~~~~~~~hg~gv~hiaf~V~   82 (150)
T d1cjxa1          10 FEFIEFASPTPGTLEPIFEI-MGFTKVATHRS----KNVHLYRQG--EINLILNNEPNSIASYFAAEHGPSVCGMAFRVK   82 (150)
T ss_dssp             EEEEEEECSSTTSSHHHHHH-TTCEEEEEESS----SSEEEEEET--TEEEEEECCSSSHHHHHHHHHSSEEEEEEEEES
T ss_pred             EEEEEEecCCHHHHHHHHHH-hCCEEEecccc----eEEEEEecC--cEEEEecCCCCCHhHhHHhhCCCceEEEEEEeC
Confidence            58999999999999999987 99999886531    123333333  2322222111111111  126789999999999


Q ss_pred             CHHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCCC
Q 024779           79 DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  127 (262)
Q Consensus        79 d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~~  127 (262)
                      |+++++++++++|+++..++..  .+......++.|+|.++.|+++.+.
T Consensus        83 D~~~a~~~a~~~Ga~~i~~~~~--~g~~~~~~i~g~gg~~i~Fv~~~~~  129 (150)
T d1cjxa1          83 DSQKAYNRALELGAQPIHIDTG--PMELNLPAIKGIGGAPLYLIDRFGE  129 (150)
T ss_dssp             CHHHHHHHHHHTTCCBCCCCCC--TTCBCCCEEECGGGCEEEEECCCSS
T ss_pred             CHHHHHHHHHHCCCEEcccCCC--CCceeeeEEEcCCCCEEEEECcCCC
Confidence            9999999999999998766533  2345567789999999999987553

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.43  E-value=1.7e-12  Score=88.61  Aligned_cols=105  Identities=12%  Similarity=0.018  Sum_probs=71.4

Q ss_pred             eEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCCHHH
Q 024779            3 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAK   82 (262)
Q Consensus         3 hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d~~~   82 (262)
                      +..|.|+|+++|++||+++|||++..+.+      ...++..+..    .+.+......    ...+..++.+.+.+++.
T Consensus         7 ~pvL~v~D~~~s~~FY~~~LG~~~~~~~~------~~~~~~~~~~----~l~~~~~~~~----~~~~~~~~~~~~~~~~~   72 (120)
T d1xrka_           7 VPVLTARDVAEAVEFWTDRLGFSRVFVED------DFAGVVRDDV----TLFISAVQDQ----VVPDNTQAWVWVRGLDE   72 (120)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCEEEEECS------SEEEEEETTE----EEEEEECSCT----TTGGGCEEEEEEECHHH
T ss_pred             EEEEEECCHHHHHHHHHHhhCCeEEEECC------CeeEEecccc----eeeccccccc----cCCCCceEEEeeccHHH
Confidence            34689999999999999999999987653      2445554432    2333332221    11234468899999999


Q ss_pred             HHHHHHHcCCee--------ecCCcccCCCCeEEEEEECCCCCEEEEEE
Q 024779           83 TVELIKAKGGKV--------TREPGPVKGGNTVIAFIEDPDGYKFELLE  123 (262)
Q Consensus        83 ~~~~l~~~G~~~--------~~~~~~~~~~~~~~~~~~DP~G~~iel~~  123 (262)
                      ....+.+.....        ..++...+  .++.+||.|||||.|||+.
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~DPdGn~ief~~  119 (120)
T d1xrka_          73 LYAEWSEVVSTNFRDASGPAMTEIVEQP--WGREFALRDPAGNCVHFVA  119 (120)
T ss_dssp             HHHHHTTTSBSCTTTCSSCEECCCEEET--TEEEEEEECTTCCEEEEEE
T ss_pred             HHHHHHHhhhHHhhhcccccccCceecC--CEEEEEEECCCCCEEEEEE
Confidence            888877665433        33333333  3478999999999999985

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.37  E-value=1.4e-12  Score=96.96  Aligned_cols=98  Identities=21%  Similarity=0.212  Sum_probs=68.7

Q ss_pred             CceEEEEeC--CHHHHHHHHHhhcCcEEEEEecCCCCcceeeEeeecCCCceeEEEeeecCCCCC--------CCCCCCc
Q 024779            1 MLHVVYRVG--DLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDK--------YDIGTGF   70 (262)
Q Consensus         1 l~hv~l~v~--d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--------~~~~~~~   70 (262)
                      |+||++.|+  |++++..||+++|||+.....+.++..................+.+..+.....        ...+.|+
T Consensus         6 IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~~~~~~~~l~~~~~~~~sqi~~fl~~~~g~Gi   85 (203)
T d1cjxa2           6 IDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQFNGEGI   85 (203)
T ss_dssp             EEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHHHTSSBC
T ss_pred             eCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeeccccccceecccCCCCCccHHHHHHHhcCCCCC
Confidence            689999997  999999999999999998876654443332222222222233333332222111        1256799


Q ss_pred             eeEEEEeCCHHHHHHHHHHcCCeeecCC
Q 024779           71 GHFGIAVDDVAKTVELIKAKGGKVTREP   98 (262)
Q Consensus        71 ~~i~~~v~d~~~~~~~l~~~G~~~~~~~   98 (262)
                      +||||.|+|+.++.++|+++|++++.+|
T Consensus        86 qHIAf~vdDI~aav~~L~~~Gv~fL~~p  113 (203)
T d1cjxa2          86 QHVAFLTDDLVKTWDALKKIGMRFMTAP  113 (203)
T ss_dssp             CEEEEEESCHHHHHHHHHHTTCCBCCCC
T ss_pred             ceEEEEeCCHHHHHHHHHhcCCccccCc
Confidence            9999999999999999999999987554

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=2.1e-12  Score=96.03  Aligned_cols=98  Identities=13%  Similarity=0.238  Sum_probs=69.2

Q ss_pred             CCceeEEeeecC--hhhhHHHHHHhcCCeeeeeccCcC-----ccceeeeeccCCCCcceEEEEeeecCCcc--------
Q 024779          129 EPLCQVMLRVGD--LDRSINFYEQAFGMELLRKRDNPE-----YKYTIAMMGYGPEDKNVVLELTYNYGVTD--------  193 (262)
Q Consensus       129 ~~~~~v~l~v~d--~~~~~~FY~~~lG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--------  193 (262)
                      .+|+||+++|++  +++++.||+++|||+.....+..+     .......+.  +.++...+.+....+...        
T Consensus        23 ~~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~--s~~~~i~~~lne~~~~~~~sqi~~fl  100 (210)
T d1sqia2          23 EIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVA--NYEESIKMPINEPAPGRKKSQIQEYV  100 (210)
T ss_dssp             EEEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEE--CTTSCCEEEEEECC-----CHHHHHH
T ss_pred             ceeCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEE--ecCccccccccccCCCCcccHHHHHH
Confidence            369999999997  999999999999998765433211     111222222  233456666665432211        


Q ss_pred             -cccCCceeEEEEEecCHHHHHHHHHHhCCeeecCC
Q 024779          194 -YDKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREP  228 (262)
Q Consensus       194 -~~~~~~~~~i~~~v~dl~~~~~~l~~~g~~~~~~~  228 (262)
                       ...|+|++||||.|+|+.+++++|+++|++++..|
T Consensus       101 ~~~~G~GiQHIAf~t~DI~~av~~L~~~Gv~fL~~P  136 (210)
T d1sqia2         101 DYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVP  136 (210)
T ss_dssp             HHHTSSEEEEEEEEESCHHHHHHHHHHHTCCBCCCC
T ss_pred             hhcCCCCeeEEEEEcCCHHHHHHHHHHcCCCCCCCC
Confidence             23478999999999999999999999999999888

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.33  E-value=2.2e-12  Score=95.09  Aligned_cols=100  Identities=13%  Similarity=0.218  Sum_probs=71.1

Q ss_pred             CCceeEEeeec--ChhhhHHHHHHhcCCeeeeeccCcCc---cceeeeeccCCCCcceEEEEeeecCCcc---------c
Q 024779          129 EPLCQVMLRVG--DLDRSINFYEQAFGMELLRKRDNPEY---KYTIAMMGYGPEDKNVVLELTYNYGVTD---------Y  194 (262)
Q Consensus       129 ~~~~~v~l~v~--d~~~~~~FY~~~lG~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~---------~  194 (262)
                      .+|+||+++|+  ++++++.||+++|||+.......++.   ...+......+.+....+.+........         .
T Consensus         5 ~~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~~~~v~l~lne~~~~~~~s~i~~FL~~   84 (199)
T d1t47a2           5 QAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDEYLEF   84 (199)
T ss_dssp             CEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHHHHHHH
T ss_pred             eeeCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeeccccccccceeecccCccccccchhhhhhh
Confidence            46999999999  99999999999999998765432221   1111111222233455666654332221         2


Q ss_pred             ccCCceeEEEEEecCHHHHHHHHHHhCCeeecCC
Q 024779          195 DKGNAYAQIAIGTDDVYKTAEAIKLFGGKVTREP  228 (262)
Q Consensus       195 ~~~~~~~~i~~~v~dl~~~~~~l~~~g~~~~~~~  228 (262)
                      ..++|++||||.|+|+.++++.|+++|++++..|
T Consensus        85 ~~g~GiQHIAl~tdDI~~av~~L~~~G~~fL~~p  118 (199)
T d1t47a2          85 YGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTP  118 (199)
T ss_dssp             HTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCC
T ss_pred             cCCCcceEEEEEcCCHHHHHHHHHHcCCCCCCCC
Confidence            3467999999999999999999999999999887

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.26  E-value=5.9e-11  Score=82.91  Aligned_cols=114  Identities=17%  Similarity=0.038  Sum_probs=74.4

Q ss_pred             eeec-ChhhhHHHHHHhcCCeeeeeccCcCccce------------eeeeccCCCCcceEEEEeeecCCcccccCCceeE
Q 024779          136 LRVG-DLDRSINFYEQAFGMELLRKRDNPEYKYT------------IAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQ  202 (262)
Q Consensus       136 l~v~-d~~~~~~FY~~~lG~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  202 (262)
                      |... |.+++.+||+++||+++.......+....            .+.+...    ...+.+....... .....+..+
T Consensus         8 l~f~g~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~----g~~~~~~d~~~~~-~~~~~~~~~   82 (137)
T d1u6la_           8 LIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVG----SFALMASDNHPAY-PYEGIKGCS   82 (137)
T ss_dssp             EEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEET----TEEEEEEECCTTS-CCCCCCSEE
T ss_pred             EEECCCHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCCCCCeEEEEEEEEc----CeEEEecccCCcc-cccCCCcEE
Confidence            4455 99999999999999999766543322111            1111111    1122222211111 222335567


Q ss_pred             EEEEecCH--HHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEecc
Q 024779          203 IAIGTDDV--YKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNV  255 (262)
Q Consensus       203 i~~~v~dl--~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  255 (262)
                      +++.+++.  .+.+.+..++|+++..+|.+.++|. +.++++||+|+.|+|...+
T Consensus        83 ~~l~~~~~d~~~~~~~~l~~G~~v~~p~~~~~wG~-~~g~v~Dp~G~~W~i~~~~  136 (137)
T d1u6la_          83 ISLNVDSKAEAERLFNALAEGGSVQMPLGPTFWAA-SFGMFTDRFGVAWMVNCEQ  136 (137)
T ss_dssp             EEEECSSHHHHHHHHHHHHTTSEEEEEEEEETTEE-EEEEEECTTSCEEEEEESC
T ss_pred             EEEEcCCHHHHHHHHhhcccCceeecCccccCCCc-EEEEEECCCCCEEEEEecC
Confidence            77777654  4557777889999999999999975 7899999999999998765

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.25  E-value=2.2e-11  Score=91.61  Aligned_cols=98  Identities=16%  Similarity=0.223  Sum_probs=67.2

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCc-----CccceeeeeccCCCCcceEEEEeeecCCc---c-------
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNP-----EYKYTIAMMGYGPEDKNVVLELTYNYGVT---D-------  193 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~-------  193 (262)
                      .+|+||++.|+|+++++.||+++|||.........     ........+.  ..++...+.+.+...+.   .       
T Consensus         8 ~~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~--~~~g~v~~~l~E~~~~~~~~s~i~~FL~   85 (224)
T d1sp8a2           8 SRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLA--NNSENVLLPLNEPVHGTKRRSQIQTFLD   85 (224)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEE--CSSSCCEEEEEEECCCSSSCCHHHHHHH
T ss_pred             CeeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEE--cCCCccceeeeeecCCCCCccHHHHHHH
Confidence            47999999999999999999999999887653221     1122222232  22345566666532221   1       


Q ss_pred             cccCCceeEEEEEecCHHHHHHHHHHhC----CeeecCC
Q 024779          194 YDKGNAYAQIAIGTDDVYKTAEAIKLFG----GKVTREP  228 (262)
Q Consensus       194 ~~~~~~~~~i~~~v~dl~~~~~~l~~~g----~~~~~~~  228 (262)
                      ...++|++||||.|+|+.++++.|+++|    ++++..|
T Consensus        86 ~~~g~GiqHIAf~vdDI~~av~~L~arGv~~G~~fl~~p  124 (224)
T d1sp8a2          86 HHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP  124 (224)
T ss_dssp             HHTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCC
T ss_pred             hccCCCceeEEEEeCCHHHHHHHHHhccccccceecccc
Confidence            1235799999999999999999999875    5566655

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.21  E-value=3.4e-11  Score=88.63  Aligned_cols=100  Identities=17%  Similarity=0.280  Sum_probs=68.6

Q ss_pred             CceEEEEeC--CHHHHHHHHHhhcCcEEEEEecCCC-----CcceeeEeeecCCCceeEEEeeecCCCCC---------C
Q 024779            1 MLHVVYRVG--DLDRTIKFYTECLGMKLLRKRDIPE-----EKYTNAFLGYGPEDSHFVIELTYNYGVDK---------Y   64 (262)
Q Consensus         1 l~hv~l~v~--d~~~a~~fY~~~lG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---------~   64 (262)
                      |+||++.|+  +++++..||+++|||+.......++     .......+...  ...+.+.+..+.....         .
T Consensus         7 IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~--~~~v~l~lne~~~~~~~s~i~~FL~~   84 (199)
T d1t47a2           7 IDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADG--TLKVKFPINEPALAKKKSQIDEYLEF   84 (199)
T ss_dssp             EEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECT--TSCSEEEEEEECCSSSCCHHHHHHHH
T ss_pred             eCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeecccc--ccccceeecccCccccccchhhhhhh
Confidence            689999998  9999999999999999876542211     12222222222  2233344443222111         1


Q ss_pred             CCCCCceeEEEEeCCHHHHHHHHHHcCCeeecCCcccC
Q 024779           65 DIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVK  102 (262)
Q Consensus        65 ~~~~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~  102 (262)
                      ..|.|++||||.|+|+.++.++|+++|++++..|....
T Consensus        85 ~~g~GiQHIAl~tdDI~~av~~L~~~G~~fL~~p~~YY  122 (199)
T d1t47a2          85 YGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDSYY  122 (199)
T ss_dssp             HTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCCGGGT
T ss_pred             cCCCcceEEEEEcCCHHHHHHHHHHcCCCCCCCChHHH
Confidence            25679999999999999999999999999987775543

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=3.3e-11  Score=89.48  Aligned_cols=97  Identities=15%  Similarity=0.294  Sum_probs=65.8

Q ss_pred             CceEEEEeCC--HHHHHHHHHhhcCcEEEEEec---CCC--CcceeeEeeecCCCceeEEEeeecCCCC--C-------C
Q 024779            1 MLHVVYRVGD--LDRTIKFYTECLGMKLLRKRD---IPE--EKYTNAFLGYGPEDSHFVIELTYNYGVD--K-------Y   64 (262)
Q Consensus         1 l~hv~l~v~d--~~~a~~fY~~~lG~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~-------~   64 (262)
                      |+||++.|++  ++++..||+++|||+..+..+   ..+  +......+...+..  ..+.+..+....  .       .
T Consensus        25 IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~~~~--i~~~lne~~~~~~~sqi~~fl~~  102 (210)
T d1sqia2          25 IDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEES--IKMPINEPAPGRKKSQIQEYVDY  102 (210)
T ss_dssp             EEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEECTTSC--CEEEEEECC-----CHHHHHHHH
T ss_pred             eCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEecCcc--ccccccccCCCCcccHHHHHHhh
Confidence            6899999988  999999999999998776532   111  12222333333333  334444322211  1       1


Q ss_pred             CCCCCceeEEEEeCCHHHHHHHHHHcCCeeecCCc
Q 024779           65 DIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPG   99 (262)
Q Consensus        65 ~~~~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~   99 (262)
                      ..|.|++||||.|+|+.++.++|+++|+++..+|.
T Consensus       103 ~~G~GiQHIAf~t~DI~~av~~L~~~Gv~fL~~P~  137 (210)
T d1sqia2         103 NGGAGVQHIALRTEDIITTIRHLRERGMEFLAVPS  137 (210)
T ss_dssp             HTSSEEEEEEEEESCHHHHHHHHHHHTCCBCCCCH
T ss_pred             cCCCCeeEEEEEcCCHHHHHHHHHHcCCCCCCCCc
Confidence            25789999999999999999999999999987764

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.21  E-value=6.4e-10  Score=77.45  Aligned_cols=113  Identities=19%  Similarity=0.127  Sum_probs=74.1

Q ss_pred             EEeC-CHHHHHHHHHhhcCcEEEEEecCCC------------CcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCcee
Q 024779            6 YRVG-DLDRTIKFYTECLGMKLLRKRDIPE------------EKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGH   72 (262)
Q Consensus         6 l~v~-d~~~a~~fY~~~lG~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   72 (262)
                      |..+ |.++|.+||+++||+++.......+            +...++.+.+++.    .+.........+ ....+-.+
T Consensus         8 l~f~g~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~----~~~~~d~~~~~~-~~~~~~~~   82 (137)
T d1u6la_           8 LIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSF----ALMASDNHPAYP-YEGIKGCS   82 (137)
T ss_dssp             EEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTE----EEEEEECCTTSC-CCCCCSEE
T ss_pred             EEECCCHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCCCCCeEEEEEEEEcCe----EEEecccCCccc-ccCCCcEE
Confidence            4455 9999999999999999987543222            1122234444321    112222111111 12223346


Q ss_pred             EEEEeCCHH--HHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEc
Q 024779           73 FGIAVDDVA--KTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  124 (262)
Q Consensus        73 i~~~v~d~~--~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  124 (262)
                      +++.+++.+  +.+.++.++|+++..++.+.++ +.+..+|.||+|+.|+|...
T Consensus        83 ~~l~~~~~d~~~~~~~~l~~G~~v~~p~~~~~w-G~~~g~v~Dp~G~~W~i~~~  135 (137)
T d1u6la_          83 ISLNVDSKAEAERLFNALAEGGSVQMPLGPTFW-AASFGMFTDRFGVAWMVNCE  135 (137)
T ss_dssp             EEEECSSHHHHHHHHHHHHTTSEEEEEEEEETT-EEEEEEEECTTSCEEEEEES
T ss_pred             EEEEcCCHHHHHHHHhhcccCceeecCccccCC-CcEEEEEECCCCCEEEEEec
Confidence            888888654  4577788899999999998887 56789999999999998754

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.20  E-value=8e-11  Score=88.47  Aligned_cols=91  Identities=19%  Similarity=0.291  Sum_probs=61.0

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCC-----CcceeeEeeecCCCceeEEEeeecCCC---CC-------CC
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPE-----EKYTNAFLGYGPEDSHFVIELTYNYGV---DK-------YD   65 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~-------~~   65 (262)
                      |+||++.|+|++++..||+++|||+..++....+     .......+..++.  ...+++.....+   ..       ..
T Consensus        10 IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~g--~v~~~l~E~~~~~~~~s~i~~FL~~~   87 (224)
T d1sp8a2          10 FDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSE--NVLLPLNEPVHGTKRRSQIQTFLDHH   87 (224)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSS--CCEEEEEEECCCSSSCCHHHHHHHHH
T ss_pred             eeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCCC--ccceeeeeecCCCCCccHHHHHHHhc
Confidence            5899999999999999999999999877643211     1222333333332  233444432111   11       11


Q ss_pred             CCCCceeEEEEeCCHHHHHHHHHHcCCe
Q 024779           66 IGTGFGHFGIAVDDVAKTVELIKAKGGK   93 (262)
Q Consensus        66 ~~~~~~~i~~~v~d~~~~~~~l~~~G~~   93 (262)
                      .+.|++||||.|+|+.++.++|+++|+.
T Consensus        88 ~g~GiqHIAf~vdDI~~av~~L~arGv~  115 (224)
T d1sp8a2          88 GGPGVQHMALASDDVLRTLREMQARSAM  115 (224)
T ss_dssp             TSSEEEEEEEEETTHHHHHHHHHTSGGG
T ss_pred             cCCCceeEEEEeCCHHHHHHHHHhcccc
Confidence            4579999999999999999999998743

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.10  E-value=1.8e-10  Score=86.76  Aligned_cols=100  Identities=14%  Similarity=0.223  Sum_probs=67.4

Q ss_pred             CCceeEEeeecChhhhHHHHHHhcCCeeeeeccCcCc---cceeeeeccCCCCcceEEEEeeecCCcc----------cc
Q 024779          129 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEY---KYTIAMMGYGPEDKNVVLELTYNYGVTD----------YD  195 (262)
Q Consensus       129 ~~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~----------~~  195 (262)
                      .+|+||+++|+|++++.+||+++||+.........+.   ...+......+.++...+.+.+...+..          ..
T Consensus        21 ~~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~s~~g~v~~~l~E~~~~~~~~sqi~~FL~~~  100 (230)
T d1sqda2          21 RRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPVHGTKRKSQIQTYLEHN  100 (230)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTSCSEEEEEEECCC---CCHHHHHHHHH
T ss_pred             CccCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeeccccCCCcccceeEEeecCCCCCcchHHHHHhhc
Confidence            4799999999999999999999999988765432221   1111111122234556677775432211          23


Q ss_pred             cCCceeEEEEEecCHHHHHHHHHHh----CCeee-cCC
Q 024779          196 KGNAYAQIAIGTDDVYKTAEAIKLF----GGKVT-REP  228 (262)
Q Consensus       196 ~~~~~~~i~~~v~dl~~~~~~l~~~----g~~~~-~~~  228 (262)
                      .|+|++||||.|+|+.+++++|+++    |++++ .+|
T Consensus       101 ~G~GiQHIAf~tdDI~aav~~LrarG~~~G~~f~~~~p  138 (230)
T d1sqda2         101 EGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPSPP  138 (230)
T ss_dssp             TSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCCCC
T ss_pred             cCCceeEEEEEeCCHHHHHHHHHHhhcccCcccccCCc
Confidence            5789999999999999999999996    55555 344

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.01  E-value=1.1e-09  Score=82.36  Aligned_cols=91  Identities=14%  Similarity=0.270  Sum_probs=60.9

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCcEEEEEecCCCC-----cceeeEeeecCCCceeEEEeeecCCC----C------CCC
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEE-----KYTNAFLGYGPEDSHFVIELTYNYGV----D------KYD   65 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~----~------~~~   65 (262)
                      |+||++.|+|++++.+||+++||+.........+.     ......+...  .....+.+......    .      ...
T Consensus        23 IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~s~--~g~v~~~l~E~~~~~~~~sqi~~FL~~~  100 (230)
T d1sqda2          23 LDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASN--DEMVLLPINEPVHGTKRKSQIQTYLEHN  100 (230)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECT--TSCSEEEEEEECCC---CCHHHHHHHHH
T ss_pred             cCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeeccccCC--CcccceeEEeecCCCCCcchHHHHHhhc
Confidence            68999999999999999999999988876543221     1111112222  22334444432211    1      122


Q ss_pred             CCCCceeEEEEeCCHHHHHHHHHHcCCe
Q 024779           66 IGTGFGHFGIAVDDVAKTVELIKAKGGK   93 (262)
Q Consensus        66 ~~~~~~~i~~~v~d~~~~~~~l~~~G~~   93 (262)
                      .|.|++||||.|+|+.++.++|+++|..
T Consensus       101 ~G~GiQHIAf~tdDI~aav~~LrarG~~  128 (230)
T d1sqda2         101 EGAGLQHLALMSEDIFRTLREMRKRSSI  128 (230)
T ss_dssp             TSCEEEEEEEEESCHHHHHHHHHHHGGG
T ss_pred             cCCceeEEEEEeCCHHHHHHHHHHhhcc
Confidence            5789999999999999999999998643

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.00  E-value=1.9e-08  Score=69.41  Aligned_cols=114  Identities=15%  Similarity=0.189  Sum_probs=72.5

Q ss_pred             EEEEeCCHHHHHHHHHhhcCcEEEEEec-------CCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEE
Q 024779            4 VVYRVGDLDRTIKFYTECLGMKLLRKRD-------IPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIA   76 (262)
Q Consensus         4 v~l~v~d~~~a~~fY~~~lG~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~   76 (262)
                      +.+.-+|.++|.+||+++||.+.+.+..       .+.+...++.+.+++.    .+.+...........+.+ ..+++.
T Consensus        10 L~f~g~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i~~~----~i~~~d~~~~~~~~~~~~-~s~~l~   84 (134)
T d1u7ia_          10 LMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQ----SVHCIDSHVRHAFDFTPA-FSFFVD   84 (134)
T ss_dssp             EEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTE----EEEEEEESSCCSCCCCTT-EEEEEE
T ss_pred             EEECCcCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEECCE----EEEEecCCCCCCCCCCCc-eEEEEE
Confidence            3344458999999999999987554321       1223444666666542    223332222222222333 457788


Q ss_pred             eCCHHHH--HHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEE
Q 024779           77 VDDVAKT--VELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  123 (262)
Q Consensus        77 v~d~~~~--~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~  123 (262)
                      +++.++.  +.+..+.|.++..++.+..+ +.+...+.||.|+.|.|.-
T Consensus        85 ~~~~d~~~~~~~~l~~gg~v~~p~~~~~~-g~~~g~v~D~fGv~W~i~~  132 (134)
T d1u7ia_          85 CESNAQIERLAEALSDGGKALMPLGDYGF-SQRFAWLADRFGVSWQLNL  132 (134)
T ss_dssp             CCCHHHHHHHHHHHHTTSEEEEEEECCSS-SSEEEEEECTTSCEEEEEE
T ss_pred             eccHHHHHHHHHHHhcCCEEecCcccccc-cceEEEEECCCCCEEEEEc
Confidence            8765443  55566778999988888776 5677889999999998863

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.92  E-value=4.1e-08  Score=67.65  Aligned_cols=114  Identities=14%  Similarity=0.076  Sum_probs=69.7

Q ss_pred             EEeeecChhhhHHHHHHhcCCeeeeecc-------CcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEE
Q 024779          134 VMLRVGDLDRSINFYEQAFGMELLRKRD-------NPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIG  206 (262)
Q Consensus       134 v~l~v~d~~~~~~FY~~~lG~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~  206 (262)
                      +.+.-.+.+++.+||+++||........       .+.+....+.+..+    ...+-+....+..+... .+...+++.
T Consensus        10 L~f~g~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i~----~~~i~~~d~~~~~~~~~-~~~~s~~l~   84 (134)
T d1u7ia_          10 LMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLG----DQSVHCIDSHVRHAFDF-TPAFSFFVD   84 (134)
T ss_dssp             EEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEET----TEEEEEEEESSCCSCCC-CTTEEEEEE
T ss_pred             EEECCcCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEEC----CEEEEEecCCCCCCCCC-CCceEEEEE
Confidence            4444458999999999999987654321       11112222333322    23333333222222222 233566777


Q ss_pred             ecCHHH--HHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEe
Q 024779          207 TDDVYK--TAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVD  253 (262)
Q Consensus       207 v~dl~~--~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~  253 (262)
                      +++.+.  .+.+..++|++++.++.+.+++. +...++||.|+.|.|.-
T Consensus        85 ~~~~d~~~~~~~~l~~gg~v~~p~~~~~~g~-~~g~v~D~fGv~W~i~~  132 (134)
T d1u7ia_          85 CESNAQIERLAEALSDGGKALMPLGDYGFSQ-RFAWLADRFGVSWQLNL  132 (134)
T ss_dssp             CCCHHHHHHHHHHHHTTSEEEEEEECCSSSS-EEEEEECTTSCEEEEEE
T ss_pred             eccHHHHHHHHHHHhcCCEEecCcccccccc-eEEEEECCCCCEEEEEc
Confidence            665433  35555677899999999988875 88899999999999863

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.54  E-value=1.6e-06  Score=58.98  Aligned_cols=109  Identities=11%  Similarity=0.101  Sum_probs=68.0

Q ss_pred             EEEeC-CHHHHHHHHHhhcCcEEEEE-ec------CCCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEE
Q 024779            5 VYRVG-DLDRTIKFYTECLGMKLLRK-RD------IPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIA   76 (262)
Q Consensus         5 ~l~v~-d~~~a~~fY~~~lG~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~   76 (262)
                      -|..+ |.++|.+||+++||-..+.+ ..      ...+...++.+.+++.    .+.+....+..+.    . .++++.
T Consensus         9 yl~f~g~a~eAi~FY~~vFg~~~v~~~~~~~~~~~~~~g~i~ha~l~i~g~----~~~~~d~~~~~~~----~-~s~~v~   79 (129)
T d1tsja_           9 FLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQ----VFMAIDANSGTEL----P-ISLFVT   79 (129)
T ss_dssp             EEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTE----EEEEEC-----------C-CCEEEE
T ss_pred             EEEECCCHHHHHHHHHHHcCCcEEEEEEecCCCCCCCCCcEEEEEEEECCE----EEEeecCCCCCCC----C-EEEEec
Confidence            45665 99999999999997543322 11      1234455666776642    2223222111111    1 247888


Q ss_pred             eCCHHHH---HHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEc
Q 024779           77 VDDVAKT---VELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  124 (262)
Q Consensus        77 v~d~~~~---~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  124 (262)
                      +++.+++   .++| +.|.++..++.+.++ +.+...+.||.|+.|.|..+
T Consensus        80 ~~~~~e~~~~~~~L-~~gg~v~~p~~~~~~-g~~~g~v~D~fGv~W~i~~p  128 (129)
T d1tsja_          80 VKDTIEMERLFNGL-KDEGAILMPKTNMPP-YREFAWVQDKFGVSFQLALP  128 (129)
T ss_dssp             CSSHHHHHHHHHHH-HTTCEEEEEEEEETT-EEEEEEEECTTSCEEEEEEC
T ss_pred             cCCHHHHHHHHHHh-ccCCEEecccccccc-cceEEEEECCCCCEEEEeCC
Confidence            8886654   4444 567788888887776 56778899999999998754

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.41  E-value=2.4e-06  Score=58.00  Aligned_cols=109  Identities=9%  Similarity=0.060  Sum_probs=64.9

Q ss_pred             Eeeec-ChhhhHHHHHHhcCCeeeee-cc------CcCccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEE
Q 024779          135 MLRVG-DLDRSINFYEQAFGMELLRK-RD------NPEYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIG  206 (262)
Q Consensus       135 ~l~v~-d~~~~~~FY~~~lG~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~  206 (262)
                      .|.+. |.+++.+||+++||-..+.. ..      .+++....+.+..+    +..+-+....+.    .+ ....+.+.
T Consensus         9 yl~f~g~a~eAi~FY~~vFg~~~v~~~~~~~~~~~~~~g~i~ha~l~i~----g~~~~~~d~~~~----~~-~~~s~~v~   79 (129)
T d1tsja_           9 FLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLN----GQVFMAIDANSG----TE-LPISLFVT   79 (129)
T ss_dssp             EEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEET----TEEEEEEC------------CCCEEEE
T ss_pred             EEEECCCHHHHHHHHHHHcCCcEEEEEEecCCCCCCCCCcEEEEEEEEC----CEEEEeecCCCC----CC-CCEEEEec
Confidence            45665 89999999999997644332 21      11222223333332    233333321111    11 12346666


Q ss_pred             ecCHHH---HHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEec
Q 024779          207 TDDVYK---TAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDN  254 (262)
Q Consensus       207 v~dl~~---~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  254 (262)
                      +++.++   +.++|. +|+++..++.+.++|. +...++||.|+.|.|...
T Consensus        80 ~~~~~e~~~~~~~L~-~gg~v~~p~~~~~~g~-~~g~v~D~fGv~W~i~~p  128 (129)
T d1tsja_          80 VKDTIEMERLFNGLK-DEGAILMPKTNMPPYR-EFAWVQDKFGVSFQLALP  128 (129)
T ss_dssp             CSSHHHHHHHHHHHH-TTCEEEEEEEEETTEE-EEEEEECTTSCEEEEEEC
T ss_pred             cCCHHHHHHHHHHhc-cCCEEecccccccccc-eEEEEECCCCCEEEEeCC
Confidence            665554   445664 5679999998889864 788999999999999754

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.93  E-value=0.017  Score=39.59  Aligned_cols=124  Identities=15%  Similarity=0.126  Sum_probs=71.2

Q ss_pred             CCHHHHHHHHHhhcCc-EEEEEecC-------CCCcceeeEeeecCCCceeEEEeeecCCCCCCCCCCCceeEEEEeCC-
Q 024779            9 GDLDRTIKFYTECLGM-KLLRKRDI-------PEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD-   79 (262)
Q Consensus         9 ~d~~~a~~fY~~~lG~-~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d-   79 (262)
                      .|.++|.+||+++||- .+......       ..+..-++.+.+++  ..  +.....  .+....+.++ ++.+.++| 
T Consensus        11 Gna~EAl~FY~~vFg~~~i~~~~~~~~~~p~~~~~~Vmha~l~i~g--~~--lm~sD~--~~~~~~~~~~-sl~l~~d~~   83 (156)
T d1u69a_          11 SAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMG--IP--CLGLNG--GPAFRHSEAF-SFQVATDDQ   83 (156)
T ss_dssp             SCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETT--EE--EEEEEC--CTTCCCCTTE-EEEEEESSH
T ss_pred             CcHHHHHHHHHHHcCCCEEeEEEecCCCCCCCCCCcEEEEEEEECC--eE--EEeecC--CCCCCCCCCe-EEEEecCCH
Confidence            6899999999999964 33332211       12234556666653  22  222222  2223334444 58888887 


Q ss_pred             --HHHHHHHHHHcCCeeecCCcccCCCCeEEEEEECCCCCEEEEEEcCCCCCCceeEEeeecChhhhHHHHHHhcCCee
Q 024779           80 --VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMEL  156 (262)
Q Consensus        80 --~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~~~~~~~~v~l~v~d~~~~~~FY~~~lG~~~  156 (262)
                        ++++.++|.+.| ++..+     .|     .+.|+.|..|.|+.+.-      .-.+.-+|.+++.+=++..+.|.-
T Consensus        84 eE~d~~f~~LsegG-~~~~~-----~G-----~v~DkFGV~Wqi~~~~~------~~~~~~~~~~~~~~~~~a~~~m~k  145 (156)
T d1u69a_          84 AETDRLWNAIVDNG-GEESA-----CG-----WCRDKWGISWQITPRVL------SEAIASPDRAAARRAFEAMMTMGR  145 (156)
T ss_dssp             HHHHHHHHHHHHTT-CEECS-----TT-----EEECTTSCEEEEEEHHH------HHHHTCSSHHHHHHHHHHHTTCSS
T ss_pred             HHHHHHHHHHhccC-CCCCC-----Ce-----EEECCCCCEEEeChHHH------HHHhcCCCHHHHHHHHHHHHcCcC
Confidence              455677777666 33222     22     37999999999995420      001122466777777777776653

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.64  E-value=0.0068  Score=41.66  Aligned_cols=98  Identities=15%  Similarity=0.050  Sum_probs=54.4

Q ss_pred             cChhhhHHHHHHhcCCe-eeeeccCc-------CccceeeeeccCCCCcceEEEEeeecCCcccccCCceeEEEEEecC-
Q 024779          139 GDLDRSINFYEQAFGME-LLRKRDNP-------EYKYTIAMMGYGPEDKNVVLELTYNYGVTDYDKGNAYAQIAIGTDD-  209 (262)
Q Consensus       139 ~d~~~~~~FY~~~lG~~-~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~v~d-  209 (262)
                      .+.+++.+||.++||-. +......+       .+....+.+..+    +..+-.....+  ..+.+ ...++.+.++| 
T Consensus        11 Gna~EAl~FY~~vFg~~~i~~~~~~~~~~p~~~~~~Vmha~l~i~----g~~lm~sD~~~--~~~~~-~~~sl~l~~d~~   83 (156)
T d1u69a_          11 SAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVM----GIPCLGLNGGP--AFRHS-EAFSFQVATDDQ   83 (156)
T ss_dssp             SCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEET----TEEEEEEECCT--TCCCC-TTEEEEEEESSH
T ss_pred             CcHHHHHHHHHHHcCCCEEeEEEecCCCCCCCCCCcEEEEEEEEC----CeEEEeecCCC--CCCCC-CCeEEEEecCCH
Confidence            48999999999999643 33221111       111122223321    22232222111  12223 33567777775 


Q ss_pred             --HHHHHHHHHHhCCeeecCCccCCCCcceEEEEeCCCCcEEEEEec
Q 024779          210 --VYKTAEAIKLFGGKVTREPGPLPGINTKITACLDPDGWKTVFVDN  254 (262)
Q Consensus       210 --l~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  254 (262)
                        +++++++|.+.| ++     .+++|     .++|+.|+.|.|+-+
T Consensus        84 eE~d~~f~~LsegG-~~-----~~~~G-----~v~DkFGV~Wqi~~~  119 (156)
T d1u69a_          84 AETDRLWNAIVDNG-GE-----ESACG-----WCRDKWGISWQITPR  119 (156)
T ss_dssp             HHHHHHHHHHHHTT-CE-----ECSTT-----EEECTTSCEEEEEEH
T ss_pred             HHHHHHHHHHhccC-CC-----CCCCe-----EEECCCCCEEEeChH
Confidence              566777877665 33     23443     399999999999965

>d1k4na_ d.32.1.5 (A:) Hypothetical protein YecM (EC4020) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YecM (EC4020)
domain: Hypothetical protein YecM (EC4020)
species: Escherichia coli [TaxId: 562]

Probab=88.97  E-value=2.1  Score=29.42  Aligned_cols=81  Identities=14%  Similarity=0.103  Sum_probs=48.4

Q ss_pred             CceEEEEeCCHHHHHHHHHhhcCc-EEEEEecCCCCcceeeEee------ecCCCceeEEEeeecCCCCCCCCCCCceeE
Q 024779            1 MLHVVYRVGDLDRTIKFYTECLGM-KLLRKRDIPEEKYTNAFLG------YGPEDSHFVIELTYNYGVDKYDIGTGFGHF   73 (262)
Q Consensus         1 l~hv~l~v~d~~~a~~fY~~~lG~-~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i   73 (262)
                      ++||+++|++.+.+.+|-+..+-+ ++......+ | .....+.      +++.. -..+||..++  .+.....|+-||
T Consensus        44 ~DHialR~n~~~~A~~w~~~l~~~G~llSen~IN-G-RPI~l~~L~~Pl~~~~~~-I~ciELP~P~--~k~Yp~eGWEHI  118 (190)
T d1k4na_          44 ADHISLRCHQNATAERWRRGFEQCGELLSENMIN-G-RPICLFKLHEPVQVAHWQ-FSIVELPWPG--EKRYPHEGWEHI  118 (190)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHTTTEEEEEEEEET-T-EEEEEEEEEEEEEETTEE-EEEEEEECCC--SSCCSSCEEEEE
T ss_pred             CcEEEEeeCCHHHHHHHHHHHHHhchhhhcCeeC-C-eeEEEEEcCCCceeCCcE-EEEEEeCCCC--CCCCCCCCceEE
Confidence            489999999999999999998866 333332222 1 1222222      22211 1235665443  344456799999


Q ss_pred             EEEeCC-HHHHHHH
Q 024779           74 GIAVDD-VAKTVEL   86 (262)
Q Consensus        74 ~~~v~d-~~~~~~~   86 (262)
                      -+.++. .+.+.++
T Consensus       119 ElVlp~~~~t~~~~  132 (190)
T d1k4na_         119 EIVLPGDPETLNAR  132 (190)
T ss_dssp             EEECCSCGGGHHHH
T ss_pred             EEEecCCHHHHHHH
Confidence            999984 3333333

>d2adza1 b.55.1.1 (A:1-43,A:117-178) Alpha-1-syntrophin {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Alpha-1-syntrophin
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=84.55  E-value=1.1  Score=27.39  Aligned_cols=35  Identities=20%  Similarity=0.248  Sum_probs=30.9

Q ss_pred             ECCCCCEEEEEEcCCCCCCceeEEeeecChhhhHHHHHH
Q 024779          112 EDPDGYKFELLERGPTPEPLCQVMLRVGDLDRSINFYEQ  150 (262)
Q Consensus       112 ~DP~G~~iel~~~~~~~~~~~~v~l~v~d~~~~~~FY~~  150 (262)
                      .||++..+|+.++    .+...+.|.++|...+..|+..
T Consensus        64 ~D~EnR~lElhSp----DG~~t~iLR~kD~a~A~~WF~A   98 (105)
T d2adza1          64 TDPEPRYLEICAA----DGQDAVFLRAKDEASARSWAGA   98 (105)
T ss_dssp             SCCSSCEEEEEET----TTTEEEEECCSSHHHHHHHHHH
T ss_pred             CCCcccEEEEECC----CCCceEEEEcCCHHHHHHHHHH
Confidence            4999999999986    6677899999999999999965

>d2g3aa1 d.108.1.1 (A:1-137) Probable acetyltransferase Atu2258 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase Atu2258
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=83.63  E-value=2.9  Score=27.03  Aligned_cols=30  Identities=10%  Similarity=0.216  Sum_probs=23.1

Q ss_pred             CceeEEeeecChhhhHHHHHHhcCCeeeeecc
Q 024779          130 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRD  161 (262)
Q Consensus       130 ~~~~v~l~v~d~~~~~~FY~~~lG~~~~~~~~  161 (262)
                      ++..+.+.+.+. .+.+||.+ +||+......
T Consensus        93 g~~~i~l~~~n~-~a~~fY~k-~GF~~~g~~~  122 (137)
T d2g3aa1          93 GCMGAYIDTMNP-DALRTYER-YGFTKIGSLG  122 (137)
T ss_dssp             TCCEEEEEESCH-HHHHHHHH-HTCEEEEEEC
T ss_pred             CCceEEEecccH-hhHHHHHh-CCCEEEEEEC
Confidence            566788877765 47999977 8999987654

>d2f06a1 d.58.18.11 (A:71-141) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: ACT-like
family: BT0572-like
domain: Hypothetical protein BT0572
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=81.09  E-value=1.3  Score=25.31  Aligned_cols=29  Identities=17%  Similarity=0.129  Sum_probs=25.0

Q ss_pred             ceeEEEEEecCHHHHHHHHHHhCCeeecC
Q 024779          199 AYAQIAIGTDDVYKTAEAIKLFGGKVTRE  227 (262)
Q Consensus       199 ~~~~i~~~v~dl~~~~~~l~~~g~~~~~~  227 (262)
                      +...+-|.|+|.+++.+.|+++|.+++..
T Consensus        37 ~~~~~vl~vdd~~~a~~~L~~~G~~vl~~   65 (71)
T d2f06a1          37 NVANVVIRPSNMDKCIEVLKEKKVDLLAA   65 (71)
T ss_dssp             TEEEEEEEESCHHHHHHHHHHTTCEEECH
T ss_pred             CcEEEEEEECCHHHHHHHHHHCCCEEEch
Confidence            34578899999999999999999998853