Citrus Sinensis ID: 024824

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260--
MNFVKLLLLFLTIGLVQSTGALKFAFDGFNTSKLLLYGNAKLDSGAISLTQDTTFSIGRALYHAKIPLKHTNSSTIRSFETSFTFSITPYNGQRPGHGLVFIFVPSADIQGAAASQYLGFLNRTNDGNRNNNVFGIEFDIVQNQEFYDINNNHVGLNVNSIISVTAYKAGYWFQDNQNKTNWWHFHALKLNNGKIYRVWIDYKDSFLGVSIAPAKMKKPLWPLLNVFIDLSDFFLDEMYAGFCAATGQLIGNHKILSWSFSN
ccHHHHHHHHHHHHHHcccccEEEEEcccccccEEEEEcEEEEcccEEEcccccccEEEEEEcccccccccccccEEEEEEEEEEEEEEccccccccEEEEEEEccccccccccccccccccccccccccccEEEEEEEEccccccccccccEEEEEEcccEEEEEEEcccccccccccccccEEEEEEEccccEEEEEEEEcccEEEEEEEEccccccccEEEEEEEccccccccEEEEEEEcccccccccEEEEEEEEcc
ccHHHHHHHHHHHHHHccccccEEEEcccccccEEEcccEEccccEEEEEcccccccccEccccccEEEccccccEEEEEEEEEEEEEcccccccccEEEEEEEcccccccccHHHHEEEEEcccccccccEEEEEEEEccccccccccccccEEEEEccccEccccccccEccccccccccccEEEEEEEccccEEEEEEEcccEEEEEEEccccccccccEEEEEEccHHHccccEEEEEEccccccccccEEEEEEEEc
MNFVKLLLLFLTIGLVQSTGALkfafdgfntsklLLYGnakldsgaisltqdTTFSIGRALYHakiplkhtnsstirsfetsftfsitpyngqrpghglvfifvpsadiqGAAASQYLGFlnrtndgnrnnnvfgiefdivqnqefydinnnhvglnVNSIISVTAYKagywfqdnqnktNWWHFHALKLNNGKIYRVWIDYkdsflgvsiapakmkkplwpllNVFIDLSDFFLDEMYAGFCAAtgqlignhkILSWSFSN
MNFVKLLLLFLTIGLVQSTGALKFAFDGFNTSKLLLYGNAKLDSGAISLTQDTTFSIGRALYHAKIPLKHTNSSTIRSFETSFTFSITPYNGQRPGHGLVFIFVPSADIQGAAASQYLGFLNRTNDGNRNNNVFGIEFDIVQNQEFYDINNNHVGLNVNSIISVTAYKAGYWFQDNQNKTNWWHFHALKLNNGKIYRVWIDYKDSFLGVSIAPAKMKKPLWPLLNVFIDLSDFFLDEMYAGFCAATGQLIGNHKILSWSFSN
MNFVKLLLLFLTIGLVQSTGALKFAFDGFNTSKLLLYGNAKLDSGAISLTQDTTFSIGRALYHAKIPLKHTNSSTIRSFETSFTFSITPYNGQRPGHGLVFIFVPSADIQGAAASQYLGFLnrtndgnrnnnVFGIEFDIVQNQEFYDINNNHVGLNVNSIISVTAYKAGYWFQDNQNKTNWWHFHALKLNNGKIYRVWIDYKDSFLGVSIAPAKMKKPLWPLLNVFIDLSDFFLDEMYAGFCAATGQLIGNHKILSWSFSN
**FVKLLLLFLTIGLVQSTGALKFAFDGFNTSKLLLYGNAKLDSGAISLTQDTTFSIGRALYHAKIPLKHTNSSTIRSFETSFTFSITPYNGQRPGHGLVFIFVPSADIQGAAASQYLGFLNRTNDGNRNNNVFGIEFDIVQNQEFYDINNNHVGLNVNSIISVTAYKAGYWFQDNQNKTNWWHFHALKLNNGKIYRVWIDYKDSFLGVSIAPAKMKKPLWPLLNVFIDLSDFFLDEMYAGFCAATGQLIGNHKILSWS***
MNFVKLLLLFLTIGLVQSTGALKFAFDGFNTSKLLLYGNAKLDSGAISLTQDTTFSIGRALYHAKIPLKHTNSSTIRSFETSFTFSITPYNGQRPGHGLVFIFVPSAD*****ASQYLGFLNRTNDGNRNNNVFGIEFDIVQNQEFYDINNNHVGLNVNSIISVTAYKAGYWFQDNQNKTNWWHFHALKLNNGKIYRVWIDYKDSFLGVSIAPAKMKKPLWPLLNVFIDLSDFFLDEMYAGFCAATGQLIGNHKILSWSFSN
MNFVKLLLLFLTIGLVQSTGALKFAFDGFNTSKLLLYGNAKLDSGAISLTQDTTFSIGRALYHAKIPLKHTNSSTIRSFETSFTFSITPYNGQRPGHGLVFIFVPSADIQGAAASQYLGFLNRTNDGNRNNNVFGIEFDIVQNQEFYDINNNHVGLNVNSIISVTAYKAGYWFQDNQNKTNWWHFHALKLNNGKIYRVWIDYKDSFLGVSIAPAKMKKPLWPLLNVFIDLSDFFLDEMYAGFCAATGQLIGNHKILSWSFSN
MNFVKLLLLFLTIGLVQSTGALKFAFDGFNTSKLLLYGNAKLDSGAISLTQDTTFSIGRALYHAKIPLKHTNSSTIRSFETSFTFSITPYNGQRPGHGLVFIFVPSADIQGAAASQYLGFLNRTNDGNRNNNVFGIEFDIVQNQEFYDINNNHVGLNVNSIISVTAYKAGYWFQDNQNKTNWWHFHALKLNNGKIYRVWIDYKDSFLGVSIAPAKMKKPLWPLLNVFIDLSDFFLDEMYAGFCAATGQLIGNHKILSWSFSN
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiii
SSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MNFVKLLLLFLTIGLVQSTGALKFAFDGFNTSKLLLYGNAKLDSGAISLTQDTTFSIGRALYHAKIPLKHTNSSTIRSFETSFTFSITPYNGQRPGHGLVFIFVPSADIQGAAASQYLGFLNRTNDGNRNNNVFGIEFDIVQNQEFYDINNNHVGLNVNSIISVTAYKAGYWFQDNQNKTNWWHFHALKLNNGKIYRVWIDYKDSFLGVSIAPAKMKKPLWPLLNVFIDLSDFFLDEMYAGFCAATGQLIGNHKILSWSFSN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query262 2.2.26 [Sep-21-2011]
Q9S9U1 686 L-type lectin-domain cont no no 0.885 0.338 0.462 1e-57
O49445 681 Probable L-type lectin-do no no 0.889 0.342 0.426 9e-50
Q9ZW11 623 Putative inactive L-type no no 0.946 0.398 0.414 1e-45
Q9ZW09 627 Probable inactive L-type no no 0.954 0.398 0.408 9e-45
Q9SZD5 669 L-type lectin-domain cont no no 0.862 0.337 0.381 1e-41
O81292 674 L-type lectin-domain cont no no 0.912 0.354 0.382 1e-39
O80939 675 L-type lectin-domain cont no no 0.900 0.349 0.379 7e-39
Q9M1G4 674 Probable L-type lectin-do no no 0.946 0.367 0.351 1e-38
O81291 669 L-type lectin-domain cont no no 0.954 0.373 0.359 1e-38
Q9LSR9 657 L-type lectin-domain cont no no 0.927 0.369 0.378 4e-38
>sp|Q9S9U1|LRK71_ARATH L-type lectin-domain containing receptor kinase VII.1 OS=Arabidopsis thaliana GN=LECRK71 PE=2 SV=1 Back     alignment and function desciption
 Score =  223 bits (568), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 111/240 (46%), Positives = 163/240 (67%), Gaps = 8/240 (3%)

Query: 21  ALKFAFDGFN--TSKLLLYGNAKLDSGAISLTQDTTFSIGRALYHAKIPLKHTNSSTIRS 78
           A+ F F+GFN  +S + L+G A ++S  ++LT  T+F+ GRALY+  I  K   +S++  
Sbjct: 20  AIDFIFNGFNDSSSNVSLFGIATIESKILTLTNQTSFATGRALYNRTIRTKDPITSSVLP 79

Query: 79  FETSFTFSITPYNGQRPGHGLVFIFVPSADIQGAAASQYLGFLNRTNDGNRNNNVFGIEF 138
           F TSF F++ PY    PGHG+VF+F PS  I G++++Q+LG  N TN+GN +N++FG+EF
Sbjct: 80  FSTSFIFTMAPYKNTLPGHGIVFLFAPSTGINGSSSAQHLGLFNLTNNGNPSNHIFGVEF 139

Query: 139 DIVQNQEFYDINNNHVGLNVNSIISVTAYKAGYWFQDNQNKTNWWHFHALKLNNGKIYRV 198
           D+  NQEF DI+ NHVG++VNS+ SV +  +GYW  D         F  LKLN+G+ Y+V
Sbjct: 140 DVFANQEFSDIDANHVGIDVNSLHSVYSNTSGYWSDDGVV------FKPLKLNDGRNYQV 193

Query: 199 WIDYKDSFLGVSIAPAKMKKPLWPLLNVFIDLSDFFLDEMYAGFCAATGQLIGNHKILSW 258
           WIDY+D  + V++  A   +P  PLL+  ++LSD   DEM+ GF AATG+L+ +HKIL+W
Sbjct: 194 WIDYRDFVVNVTMQVAGKIRPKIPLLSTSLNLSDVVEDEMFVGFTAATGRLVQSHKILAW 253

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1
>sp|O49445|LRK72_ARATH Probable L-type lectin-domain containing receptor kinase VII.2 OS=Arabidopsis thaliana GN=LECRK72 PE=1 SV=2 Back     alignment and function description
>sp|Q9ZW11|LRK32_ARATH Putative inactive L-type lectin-domain containing receptor kinase III.2 OS=Arabidopsis thaliana GN=LECRK32 PE=3 SV=1 Back     alignment and function description
>sp|Q9ZW09|LRK31_ARATH Probable inactive L-type lectin-domain containing receptor kinase III.1 OS=Arabidopsis thaliana GN=LECRK31 PE=3 SV=1 Back     alignment and function description
>sp|Q9SZD5|LRK59_ARATH L-type lectin-domain containing receptor kinase V.9 OS=Arabidopsis thaliana GN=LECRK59 PE=2 SV=1 Back     alignment and function description
>sp|O81292|LRK43_ARATH L-type lectin-domain containing receptor kinase IV.3 OS=Arabidopsis thaliana GN=LECRK43 PE=2 SV=1 Back     alignment and function description
>sp|O80939|LRK41_ARATH L-type lectin-domain containing receptor kinase IV.1 OS=Arabidopsis thaliana GN=LECRK41 PE=1 SV=1 Back     alignment and function description
>sp|Q9M1G4|LRK15_ARATH Probable L-type lectin-domain containing receptor kinase I.5 OS=Arabidopsis thaliana GN=LECRK15 PE=2 SV=2 Back     alignment and function description
>sp|O81291|LRK44_ARATH L-type lectin-domain containing receptor kinase IV.4 OS=Arabidopsis thaliana GN=LECRK44 PE=3 SV=1 Back     alignment and function description
>sp|Q9LSR9|LRK18_ARATH L-type lectin-domain containing receptor kinase I.8 OS=Arabidopsis thaliana GN=LECRK18 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query262
255536803 728 kinase, putative [Ricinus communis] gi|2 0.980 0.353 0.542 1e-73
356549325 684 PREDICTED: L-type lectin-domain containi 0.954 0.365 0.525 5e-72
147854731292 hypothetical protein VITISV_003877 [Viti 0.969 0.869 0.519 2e-71
359496168 947 PREDICTED: L-type lectin-domain containi 0.919 0.254 0.52 2e-70
356555321 679 PREDICTED: L-type lectin-domain containi 0.916 0.353 0.526 1e-69
147854730 761 hypothetical protein VITISV_003876 [Viti 0.919 0.316 0.52 2e-69
302143298 1442 unnamed protein product [Vitis vinifera] 0.919 0.167 0.504 1e-68
259121365 689 lectin kinase [Pisum sativum] 0.923 0.351 0.522 1e-68
147815100 1793 hypothetical protein VITISV_005356 [Viti 0.904 0.132 0.516 2e-68
224125344 681 predicted protein [Populus trichocarpa] 0.958 0.368 0.503 6e-68
>gi|255536803|ref|XP_002509468.1| kinase, putative [Ricinus communis] gi|223549367|gb|EEF50855.1| kinase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  282 bits (722), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 140/258 (54%), Positives = 182/258 (70%), Gaps = 1/258 (0%)

Query: 6   LLLLFLTIGLVQSTGALKFAFDGFNTSKLLLYGNAKLDSGAISLTQDTTFSIGRALYHAK 65
           L+L+ + +   Q   A  F ++GFN+S LLLYG A ++S  +SLT +TTF+IGRALY +K
Sbjct: 14  LVLVSIILFCQQPILATDFVYNGFNSSSLLLYGYAVIESRILSLTNETTFTIGRALYPSK 73

Query: 66  IPLKHTNSSTIRSFETSFTFSITPYNGQRPGHGLVFIFVPSADIQGAAASQYLGFLNRTN 125
           I  K  NSS +  F TSF F++ PY    PGHGLVFIFVP A I+G   +Q LG  NRTN
Sbjct: 74  IRTKDPNSSYVYPFSTSFIFAMAPYKNVLPGHGLVFIFVPIAGIEGTTTAQNLGLFNRTN 133

Query: 126 DGNRNNNVFGIEFDIVQNQEFYDINNNHVGLNVNSIISVTAYKAGYWFQDNQNKT-NWWH 184
           DGN NN+V GIEFD+  NQEF DIN+NHVG++VNS+ S  A  AGYW  D ++ + +   
Sbjct: 134 DGNPNNHVLGIEFDVFSNQEFNDINDNHVGIDVNSLTSRFAEDAGYWLDDRRSSSEDMKS 193

Query: 185 FHALKLNNGKIYRVWIDYKDSFLGVSIAPAKMKKPLWPLLNVFIDLSDFFLDEMYAGFCA 244
           F  LKLNNG+ Y+VWIDY DS + +++AP   ++P  PLLNV IDLS  F +EMY GF A
Sbjct: 194 FKRLKLNNGENYQVWIDYADSLINITMAPVGTRRPSRPLLNVSIDLSGIFEEEMYVGFTA 253

Query: 245 ATGQLIGNHKILSWSFSN 262
           +TG+L+ +HKIL+WSFSN
Sbjct: 254 STGRLVESHKILAWSFSN 271

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356549325|ref|XP_003543044.1| PREDICTED: L-type lectin-domain containing receptor kinase VII.1-like [Glycine max] Back     alignment and taxonomy information
>gi|147854731|emb|CAN78608.1| hypothetical protein VITISV_003877 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359496168|ref|XP_002270216.2| PREDICTED: L-type lectin-domain containing receptor kinase VII.1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356555321|ref|XP_003545982.1| PREDICTED: L-type lectin-domain containing receptor kinase VII.1-like [Glycine max] Back     alignment and taxonomy information
>gi|147854730|emb|CAN78607.1| hypothetical protein VITISV_003876 [Vitis vinifera] Back     alignment and taxonomy information
>gi|302143298|emb|CBI21859.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|259121365|gb|ABU75307.2| lectin kinase [Pisum sativum] Back     alignment and taxonomy information
>gi|147815100|emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224125344|ref|XP_002329782.1| predicted protein [Populus trichocarpa] gi|222870844|gb|EEF07975.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query262
TAIR|locus:2138381 686 AT4G04960 [Arabidopsis thalian 0.965 0.368 0.437 1.6e-54
TAIR|locus:2142679274 AT5G03350 [Arabidopsis thalian 0.969 0.927 0.418 2.2e-50
TAIR|locus:2088349276 AT3G16530 [Arabidopsis thalian 0.973 0.923 0.424 2.8e-50
TAIR|locus:2037010283 AT1G53080 [Arabidopsis thalian 1.0 0.925 0.410 3.2e-49
TAIR|locus:504955770271 AT3G15356 [Arabidopsis thalian 0.973 0.940 0.421 6e-48
TAIR|locus:2037021272 AT1G53070 [Arabidopsis thalian 0.950 0.915 0.389 2.5e-42
TAIR|locus:2043127 623 AT2G29250 [Arabidopsis thalian 0.946 0.398 0.395 8.4e-42
TAIR|locus:2043162 627 AT2G29220 [Arabidopsis thalian 0.958 0.400 0.387 2.2e-41
TAIR|locus:2037031242 AT1G53060 [Arabidopsis thalian 0.828 0.896 0.405 2e-40
TAIR|locus:2133229 674 LPK1 "lectin-like protein kina 0.931 0.362 0.361 3.3e-37
TAIR|locus:2138381 AT4G04960 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
 Identities = 115/263 (43%), Positives = 167/263 (63%)

Query:     4 VKLLLLFLTIGLV--QSTGALKFAFDGFN--TSKLLLYGNAKLDSGAISLTQDTTFSIGR 59
             +K LL  LT+ L+      A+ F F+GFN  +S + L+G A ++S  ++LT  T+F+ GR
Sbjct:     1 MKALLFLLTLFLILPNPISAIDFIFNGFNDSSSNVSLFGIATIESKILTLTNQTSFATGR 60

Query:    60 ALYHAKIPLKHTNSSTIRSFETSFTFSITPYNGQRPGHGLVFIFVPSADIQGAAASQYLG 119
             ALY+  I  K   +S++  F TSF F++ PY    PGHG+VF+F PS  I G++++Q+LG
Sbjct:    61 ALYNRTIRTKDPITSSVLPFSTSFIFTMAPYKNTLPGHGIVFLFAPSTGINGSSSAQHLG 120

Query:   120 FLXXXXXXXXXXXVFGIEFDIVQNQEFYDINNNHVGLNVNSIISVTAYKAGYWFQDNQNK 179
                          +FG+EFD+  NQEF DI+ NHVG++VNS+ SV +  +GYW  D    
Sbjct:   121 LFNLTNNGNPSNHIFGVEFDVFANQEFSDIDANHVGIDVNSLHSVYSNTSGYWSDDGVV- 179

Query:   180 TNWWHFHALKLNNGKIYRVWIDYKDSFLGVSIAPAKMKKPLWPLLNVFIDLSDFFLDEMY 239
                  F  LKLN+G+ Y+VWIDY+D  + V++  A   +P  PLL+  ++LSD   DEM+
Sbjct:   180 -----FKPLKLNDGRNYQVWIDYRDFVVNVTMQVAGKIRPKIPLLSTSLNLSDVVEDEMF 234

Query:   240 AGFCAATGQLIGNHKILSWSFSN 262
              GF AATG+L+ +HKIL+WSFSN
Sbjct:   235 VGFTAATGRLVQSHKILAWSFSN 257
GO:0004672 "protein kinase activity" evidence=IEA
GO:0004674 "protein serine/threonine kinase activity" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
GO:0005886 "plasma membrane" evidence=ISM
GO:0006468 "protein phosphorylation" evidence=IEA
GO:0016301 "kinase activity" evidence=ISS
GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA
TAIR|locus:2142679 AT5G03350 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2088349 AT3G16530 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2037010 AT1G53080 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504955770 AT3G15356 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2037021 AT1G53070 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2043127 AT2G29250 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2043162 AT2G29220 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2037031 AT1G53060 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2133229 LPK1 "lectin-like protein kinase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query262
cd06899236 cd06899, lectin_legume_LecRK_Arcelin_ConA, legume 8e-78
pfam00139231 pfam00139, Lectin_legB, Legume lectin domain 3e-77
cd01951223 cd01951, lectin_L-type, legume lectins 5e-20
>gnl|CDD|173887 cd06899, lectin_legume_LecRK_Arcelin_ConA, legume lectins, lectin-like receptor kinases, arcelin, concanavalinA, and alpha-amylase inhibitor Back     alignment and domain information 
 Score =  234 bits (600), Expect = 8e-78
 Identities = 107/247 (43%), Positives = 146/247 (59%), Gaps = 21/247 (8%)

Query: 22  LKFAFDGFNT--SKLLLYGNAKLDS-GAISLTQDT--TFSIGRALYHAKIPLKHTNSSTI 76
           L F F+GF++  S L L G+A + S GA+ LT DT    S+GRALY   + L  + +  +
Sbjct: 1   LSFNFNGFSSDQSNLTLQGDATISSNGALQLTNDTSPASSVGRALYSKPVRLWDSTTGKV 60

Query: 77  RSFETSFTFSITPYNGQRPGHGLVFIFVPSADIQGAAASQYLGFLNRTNDGNRNNNVFGI 136
            SF TSF+FSITP N    G GL F   P+  +  A++  YLG  N +N+GN +N++  +
Sbjct: 61  ASFSTSFSFSITPPNPSLGGDGLAFFLAPTDSLPPASSGGYLGLFNSSNNGNSSNHIVAV 120

Query: 137 EFDIVQNQEFYDINNNHVGLNVNSIISVTAYKAGYWFQDNQNKTNWWHFHALKLNNGKIY 196
           EFD  QN EF D ++NHVG++VNS++SV   KAGYW  D             KL +GK  
Sbjct: 121 EFDTFQNPEFGDPDDNHVGIDVNSLVSV---KAGYWDDDGG-----------KLKSGKPM 166

Query: 197 RVWIDY--KDSFLGVSIAPAKMKKPLWPLLNVFIDLSDFFLDEMYAGFCAATGQLIGNHK 254
           + WIDY      L V++A + + KP  PLL+  +DLS    +E+Y GF A+TG L   H 
Sbjct: 167 QAWIDYDSSSKRLSVTLAYSGVAKPKKPLLSYPVDLSKVLPEEVYVGFSASTGLLTELHY 226

Query: 255 ILSWSFS 261
           ILSWSFS
Sbjct: 227 ILSWSFS 233

This alignment model includes the legume lectins (also known as agglutinins), the arcelin (also known as phytohemagglutinin-L) family of lectin-like defense proteins, the LecRK family of lectin-like receptor kinases, concanavalinA (ConA), and an alpha-amylase inhibitor. Arcelin is a major seed glycoprotein discovered in kidney beans (Phaseolus vulgaris) that has insecticidal properties and protects the seeds from predation by larvae of various bruchids. Arcelin is devoid of monosaccharide binding properties and lacks a key metal-binding loop that is present in other members of this family. Phytohaemagglutinin (PHA) is a lectin found in plants, especially beans, that affects cell metabolism by inducing mitosis and by altering the permeability of the cell membrane to various proteins. PHA agglutinates most mammalian red blood cell types by binding glycans on the cell surface. Medically, PHA is used as a mitogen to trigger cell division in T-lymphocytes and to activate latent HIV-1 from human peripheral lymphocytes. Plant L-type lectins are primarily found in the seeds of leguminous plants where they constitute about 10% of the total soluble protein of the seed extracts. They are synthesized during seed development several weeks after flowering and transported to the vacuole where they become condensed into specialized vesicles called protein bodies. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded sheet and homotetramers occur by a back-to-back association of these homodimers. Though L-type lectins exhibit both sequence and structural similarity to one another, their carbohydrate binding specificities differ widely. Length = 236
>gnl|CDD|215744 pfam00139, Lectin_legB, Legume lectin domain Back     alignment and domain information
>gnl|CDD|173886 cd01951, lectin_L-type, legume lectins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 262
cd06899236 lectin_legume_LecRK_Arcelin_ConA legume lectins, l 100.0
PF00139236 Lectin_legB: Legume lectin domain; InterPro: IPR00 100.0
cd01951223 lectin_L-type legume lectins. The L-type (legume-t 100.0
cd07308218 lectin_leg-like legume-like lectins: ERGIC-53, ERG 99.97
cd06902225 lectin_ERGIC-53_ERGL ERGIC-53 and ERGL type 1 tran 99.96
cd06901248 lectin_VIP36_VIPL VIP36 and VIPL type 1 transmembr 99.95
PF03388229 Lectin_leg-like: Legume-like lectin family; InterP 99.93
cd06903215 lectin_EMP46_EMP47 EMP46 and EMP47 type 1 transmem 99.92
KOG3838 497 consensus Mannose lectin ERGIC-53, involved in gly 99.89
KOG3839351 consensus Lectin VIP36, involved in the transport 99.86
cd06900255 lectin_VcfQ VcfQ bacterial pilus biogenesis protei 99.27
smart00282135 LamG Laminin G domain. 87.18
>cd06899 lectin_legume_LecRK_Arcelin_ConA legume lectins, lectin-like receptor kinases, arcelin, concanavalinA, and alpha-amylase inhibitor Back     alignment and domain information 
Probab=100.00  E-value=7.6e-58  Score=401.40  Aligned_cols=227  Identities=45%  Similarity=0.759  Sum_probs=202.4

Q ss_pred             eeEEeCCCCC--CCeEEEeceEEe-CCeEEeCCCC--CCcEEEEEeCCceecccCCCCCeeeeEEEEEEEEecCCCCCCC
Q 024824           22 LKFAFDGFNT--SKLLLYGNAKLD-SGAISLTQDT--TFSIGRALYHAKIPLKHTNSSTIRSFETSFTFSITPYNGQRPG   96 (262)
Q Consensus        22 ~~f~~~~F~~--~~~~l~G~A~i~-~~~i~LT~~~--~~~~G~~~y~~pi~l~~~~~~~~~sFst~F~F~I~~~~~~~~g   96 (262)
                      ++|+|++|..  ++|.|+|+|.+. ++.||||++.  ++++|||||++||+||++.+++++||+|+|+|+|.++....+|
T Consensus         1 ~~f~f~~f~~~~~~l~l~G~A~~~~~~~i~LT~~~~~~~~~G~v~y~~pi~l~~~~~~~~~sFst~F~F~i~~~~~~~~g   80 (236)
T cd06899           1 LSFNFNGFSSDQSNLTLQGDATISSNGALQLTNDTSPASSVGRALYSKPVRLWDSTTGKVASFSTSFSFSITPPNPSLGG   80 (236)
T ss_pred             CceecCCCCCCCCCEEEecceEcCCCCeEEecCCCCCCcceEEEEeCCCEEeecCCCCCceeEEEEEEEEEEcCCCCCCC
Confidence            4799999986  799999999997 9999999998  8999999999999999999999999999999999987656789


Q ss_pred             cceEEEEeeCCCCCCCCCCCccCCCCcCCCCCCCCcEEEEEEeeeccccccCCCCCeeEEEcCCccccceeecceeecCC
Q 024824           97 HGLVFIFVPSADIQGAAASQYLGFLNRTNDGNRNNNVFGIEFDIVQNQEFYDINNNHVGLNVNSIISVTAYKAGYWFQDN  176 (262)
Q Consensus        97 dGlAF~l~~~~~~~~~~~G~~lGl~~~~~~~~~~~~~~AVEFDT~~N~~~~Dp~~~HIgi~~ns~~s~~~~~~~~~~~~~  176 (262)
                      |||||||+|....+.+..|++||+.+..+.+.+.++.+|||||||+|.+++||+.+||||++|++.|..+..   |..  
T Consensus        81 dGlAF~i~~~~~~~~~~~G~~lG~~~~~~~~~~~~~~vAVEFDT~~n~~~~D~~~nHigIdvn~~~S~~~~~---~~~--  155 (236)
T cd06899          81 DGLAFFLAPTDSLPPASSGGYLGLFNSSNNGNSSNHIVAVEFDTFQNPEFGDPDDNHVGIDVNSLVSVKAGY---WDD--  155 (236)
T ss_pred             CeEEEEEecCCCCCCCCCcceeeeecCCCCCCcccceEEEEeecccCcccCCCCCCeEEEEcCCcccceeec---ccc--
Confidence            999999999875444678999999988766666789999999999999888999999999999987665532   432  


Q ss_pred             CCCcccceeeeeeecCCceEEEEEEEe--CCeeEEEEEeCCCCCCCCceEEEEecCCCCCCCcEEEEEEeeccCcccceE
Q 024824          177 QNKTNWWHFHALKLNNGKIYRVWIDYK--DSFLGVSIAPAKMKKPLWPLLNVFIDLSDFFLDEMYAGFCAATGQLIGNHK  254 (262)
Q Consensus       177 g~~~~~~~~~~~~l~~G~~~~v~I~Y~--~~~L~V~l~~~~~~~~~~~~ls~~vdL~~~l~~~~~vGFSAsTG~~~~~h~  254 (262)
                               ..+.|.+|+.++|||+|+  +++|+|+|+..+..+|..|++++.+||+.+|+++|||||||+||+..|.|+
T Consensus       156 ---------~~~~l~~g~~~~v~I~Y~~~~~~L~V~l~~~~~~~~~~~~ls~~vdL~~~l~~~~~vGFSasTG~~~~~h~  226 (236)
T cd06899         156 ---------DGGKLKSGKPMQAWIDYDSSSKRLSVTLAYSGVAKPKKPLLSYPVDLSKVLPEEVYVGFSASTGLLTELHY  226 (236)
T ss_pred             ---------ccccccCCCeEEEEEEEcCCCCEEEEEEEeCCCCCCcCCEEEEeccHHHhCCCceEEEEEeEcCCCcceEE
Confidence                     233478999999999994  799999999877668889999999999999999999999999999999999


Q ss_pred             EEEEEEeC
Q 024824          255 ILSWSFSN  262 (262)
Q Consensus       255 I~sWsF~~  262 (262)
                      |++|+|++
T Consensus       227 i~sWsF~s  234 (236)
T cd06899         227 ILSWSFSS  234 (236)
T ss_pred             EEEEEEEc
Confidence            99999985

This alignment model includes the legume lectins (also known as agglutinins), the arcelin (also known as phytohemagglutinin-L) family of lectin-like defense proteins, the LecRK family of lectin-like receptor kinases, concanavalinA (ConA), and an alpha-amylase inhibitor. Arcelin is a major seed glycoprotein discovered in kidney beans (Phaseolus vulgaris) that has insecticidal properties and protects the seeds from predation by larvae of various bruchids. Arcelin is devoid of monosaccharide binding properties and lacks a key metal-binding loop that is present in other members of this family. Phytohaemagglutinin (PHA) is a lectin found in plants, especially beans, that affects cell metabolism by inducing mitosis and by altering the permeability of the cell membrane to various proteins. PHA agglutinates most mammalian red blood cell types by bindin
>PF00139 Lectin_legB: Legume lectin domain; InterPro: IPR001220 Legume lectins are one of the largest lectin families with more than 70 lectins reported Back     alignment and domain information
>cd01951 lectin_L-type legume lectins Back     alignment and domain information
>cd07308 lectin_leg-like legume-like lectins: ERGIC-53, ERGL, VIP36, VIPL, EMP46, and EMP47 Back     alignment and domain information
>cd06902 lectin_ERGIC-53_ERGL ERGIC-53 and ERGL type 1 transmembrane proteins, N-terminal lectin domain Back     alignment and domain information
>cd06901 lectin_VIP36_VIPL VIP36 and VIPL type 1 transmembrane proteins, lectin domain Back     alignment and domain information
>PF03388 Lectin_leg-like: Legume-like lectin family; InterPro: IPR005052 Lectins are structurally diverse proteins that bind to specific carbohydrates Back     alignment and domain information
>cd06903 lectin_EMP46_EMP47 EMP46 and EMP47 type 1 transmembrane proteins, N-terminal lectin domain Back     alignment and domain information
>KOG3838 consensus Mannose lectin ERGIC-53, involved in glycoprotein traffic [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG3839 consensus Lectin VIP36, involved in the transport of glycoproteins carrying high mannose-type glycans [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>cd06900 lectin_VcfQ VcfQ bacterial pilus biogenesis protein, lectin domain Back     alignment and domain information
>smart00282 LamG Laminin G domain Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query262
3ujo_A281 Galactose-Specific Seed Lectin From Dolichos Lablab 2e-17
1fat_A252 Phytohemagglutinin-L Length = 252 1e-16
1g8w_A233 Improved Structure Of Phytohemagglutinin-L From The 1e-16
2fmd_A240 Structural Basis Of Carbohydrate Recognition By Bow 2e-15
1fay_A238 Winged Bean Acidic Lectin Complexed With Methyl-Alp 5e-14
1lul_A253 Db58, A Legume Lectin From Dolichos Biflorus Length 8e-14
3usu_B242 Crystal Structure Of Butea Monosperma Seed Lectin L 8e-14
3usu_A256 Crystal Structure Of Butea Monosperma Seed Lectin L 9e-14
1dbn_A239 Maackia Amurensis Leukoagglutinin (Lectin) With Sia 1e-13
1bjq_A253 The Dolichos Biflorus Seed Lectin In Complex With A 3e-13
2sba_A253 Soybean Agglutinin Complexed With 2,6-Pentasacchari 4e-13
1wbf_A242 Winged Bean Lectin, Saccharide Free Form Length = 2 6e-13
2e7q_A237 Crystal Structure Of Basic Winged Bean Lectin In Co 6e-13
1wbl_A241 Winged Bean Lectin Complexed With Methyl-Alpha-D-Ga 6e-13
3ipv_B239 Crystal Structure Of Spatholobus Parviflorus Seed L 9e-13
3ipv_A251 Crystal Structure Of Spatholobus Parviflorus Seed L 1e-12
1fny_A237 Legume Lectin Of The Bark Of Robinia Pseudoacacia. 2e-12
2pel_A236 Peanut Lectin Length = 236 4e-12
1bzw_A232 Peanut Lectin Complexed With C-Lactose Length = 232 4e-12
2bqp_A234 The Structure Of The Pea Lectin-D-Glucopyranose Com 6e-12
3zvx_A261 Structure Of The Lectin From Platypodium Elegans In 1e-11
1hql_A257 The Xenograft Antigen In Complex With The B4 Isolec 2e-11
1gnz_A257 Lectin I-B4 From Griffonia Simplicifolia (Gs I-B4)m 3e-11
1qnw_A242 Lectin Ii From Ulex Europaeus Length = 242 3e-10
3n35_A242 Erythrina Corallodendron Lectin Mutant (Y106g) With 3e-10
1avb_A226 Arcelin-1 From Phaseolus Vulgaris L Length = 226 4e-10
1sfy_A239 Crystal Structure Of Recombinant Erythrina Corallod 6e-10
1n47_A233 Isolectin B4 From Vicia Villosa In Complex With The 7e-10
1dhk_B223 Structure Of Porcine Pancreatic Alpha-Amylase Lengt 1e-09
1viw_B205 Tenebrio Molitor Alpha-Amylase-Inhibitor Complex Le 1e-09
1q8o_A252 Pterocartpus Angolensis Lectin Pal In Complex With 2e-09
1uzy_A242 Erythrina Crystagalli Lectin Length = 242 2e-09
1n3o_A252 Pterocarcpus Angolensis Lectin In Complex With Alph 2e-09
1lte_A239 Structure Of A Legume Lectin With An Ordered N-Link 2e-09
1ax0_A239 Erythrina Corallodendron Lectin In Complex With N-A 2e-09
1gz9_A239 High-Resolution Crystal Structure Of Erythrina Cris 3e-09
1fyu_A255 Crystal Structure Of Erythrina Corallodendron Lecti 3e-09
2lal_A181 Crystal Structure Determination And Refinement At 2 8e-08
1rin_A180 X-Ray Crystal Structure Of A Pea Lectin-Trimannosid 9e-08
2ltn_A181 Design, Expression, And Crystallization Of Recombin 1e-07
1ofs_A187 Pea Lectin-sucrose Complex Length = 187 1e-07
1lof_C181 X-Ray Structure Of A Biantennary Octasaccharide-Lec 1e-07
1lgc_A181 Interaction Of A Legume Lectin With The N2 Fragment 1e-07
1loa_A181 Three-Dimensional Structures Of Complexes Of Lathyr 2e-07
1lgb_A181 Interaction Of A Legume Lectin With The N2 Fragment 2e-07
2eig_A234 Lotus Tetragonolobus Seed Lectin (Isoform) Length = 1e-06
2b7y_A182 Fava Bean Lectin-Glucose Complex Length = 182 3e-06
1gsl_A243 Lectin (Fourth Isolated From (Griffonia Simplicifol 3e-06
1fx5_A242 Crystal Structure Analysis Of Ulex Europaeus Lectin 4e-05
1ioa_A240 Arcelin-5, A Lectin-Like Defense Protein From Phase 6e-05
>pdb|3UJO|A Chain A, Galactose-Specific Seed Lectin From Dolichos Lablab In Complex With Adenine And Galactose Length = 281 Back     alignment and structure 
Iteration: 1

 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 117/273 (42%), Gaps = 37/273 (13%)
Query: 1   MNFVKLLLLFLTIGLVQSTGALKFAFDGFNTSKLLLYGNAKLDSGAISLTQ------DTT 54
           M  + L L+ LT     S   + F F  FN + L+L  +A + SG + +T+       T 
Sbjct: 8   MKRIVLFLILLTKA--ASANLISFTFKKFNETNLILQRDATVSSGKLRITKAAENGVPTA 65
Query: 55  FSIGRALYHAKIPLKHTNSSTIRSFETSFTFSITPYNGQRPGHGLVFIFVPSADIQGAAA 114
            S+GRA Y   I +    + T+ S+ TSFTF++   N   P  GL F  VP    Q    
Sbjct: 66  GSLGRAFYSTPIQIWDNTTGTVASWATSFTFNLQAPNAASPADGLAFALVPVGS-QPKDK 124
Query: 115 SQYLGFLXXXXXXXXXXXVFGIEFDIVQNQEFYDINNNHVGLNVNSIISVTAYKAGYWFQ 174
             +LG             V  +EFD   N   +D    H+G++VNSI S+          
Sbjct: 125 GGFLGLFDSKNYASSNQTV-AVEFDTFYNGG-WDPTERHIGIDVNSIKSI---------- 172
Query: 175 DNQNKTNWWHFHALKLNNGKIYRVWIDYKDS--FLGVSIAPAKMKKPLWPLLNVFIDLSD 232
               KT  W F      NG+   V I Y  S   L  S+     K     +++  +DL+ 
Sbjct: 173 ----KTTSWDFA-----NGENAEVLITYDSSTNLLVASLVHPSQKTSF--IVSERVDLTS 221
Query: 233 FFLDEMYAGFCAATGQLIG---NHKILSWSFSN 262
              + +  GF A TG   G    +++LSWSF++
Sbjct: 222 VLPEWVSVGFSATTGLSKGYVETNEVLSWSFAS 254
>pdb|1FAT|A Chain A, Phytohemagglutinin-L Length = 252 Back     alignment and structure
>pdb|1G8W|A Chain A, Improved Structure Of Phytohemagglutinin-L From The Kidney Bean Length = 233 Back     alignment and structure
>pdb|2FMD|A Chain A, Structural Basis Of Carbohydrate Recognition By Bowringia Milbraedii Seed Agglutinin Length = 240 Back     alignment and structure
>pdb|1FAY|A Chain A, Winged Bean Acidic Lectin Complexed With Methyl-Alpha-D-Galactose (Monoclinic Form) Length = 238 Back     alignment and structure
>pdb|1LUL|A Chain A, Db58, A Legume Lectin From Dolichos Biflorus Length = 253 Back     alignment and structure
>pdb|3USU|B Chain B, Crystal Structure Of Butea Monosperma Seed Lectin Length = 242 Back     alignment and structure
>pdb|3USU|A Chain A, Crystal Structure Of Butea Monosperma Seed Lectin Length = 256 Back     alignment and structure
>pdb|1DBN|A Chain A, Maackia Amurensis Leukoagglutinin (Lectin) With Sialyllactose Length = 239 Back     alignment and structure
>pdb|1BJQ|A Chain A, The Dolichos Biflorus Seed Lectin In Complex With Adenine Length = 253 Back     alignment and structure
>pdb|2SBA|A Chain A, Soybean Agglutinin Complexed With 2,6-Pentasaccharide Length = 253 Back     alignment and structure
>pdb|1WBF|A Chain A, Winged Bean Lectin, Saccharide Free Form Length = 242 Back     alignment and structure
>pdb|2E7Q|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex With B Blood Group Trisaccharide Length = 237 Back     alignment and structure
>pdb|1WBL|A Chain A, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose Length = 241 Back     alignment and structure
>pdb|3IPV|B Chain B, Crystal Structure Of Spatholobus Parviflorus Seed Lectin Length = 239 Back     alignment and structure
>pdb|3IPV|A Chain A, Crystal Structure Of Spatholobus Parviflorus Seed Lectin Length = 251 Back     alignment and structure
>pdb|1FNY|A Chain A, Legume Lectin Of The Bark Of Robinia Pseudoacacia. Length = 237 Back     alignment and structure
>pdb|2PEL|A Chain A, Peanut Lectin Length = 236 Back     alignment and structure
>pdb|1BZW|A Chain A, Peanut Lectin Complexed With C-Lactose Length = 232 Back     alignment and structure
>pdb|2BQP|A Chain A, The Structure Of The Pea Lectin-D-Glucopyranose Complex Length = 234 Back     alignment and structure
>pdb|3ZVX|A Chain A, Structure Of The Lectin From Platypodium Elegans In Complex With A Trimannoside Length = 261 Back     alignment and structure
>pdb|1HQL|A Chain A, The Xenograft Antigen In Complex With The B4 Isolectin Of Griffonia Simplicifolia Lectin-1 Length = 257 Back     alignment and structure
>pdb|1GNZ|A Chain A, Lectin I-B4 From Griffonia Simplicifolia (Gs I-B4)metal Free Form Length = 257 Back     alignment and structure
>pdb|1QNW|A Chain A, Lectin Ii From Ulex Europaeus Length = 242 Back     alignment and structure
>pdb|3N35|A Chain A, Erythrina Corallodendron Lectin Mutant (Y106g) With N- Acetylgalactosamine Length = 242 Back     alignment and structure
>pdb|1AVB|A Chain A, Arcelin-1 From Phaseolus Vulgaris L Length = 226 Back     alignment and structure
>pdb|1SFY|A Chain A, Crystal Structure Of Recombinant Erythrina Corallodandron Lectin Length = 239 Back     alignment and structure
>pdb|1N47|A Chain A, Isolectin B4 From Vicia Villosa In Complex With The Tn Antigen Length = 233 Back     alignment and structure
>pdb|1DHK|B Chain B, Structure Of Porcine Pancreatic Alpha-Amylase Length = 223 Back     alignment and structure
>pdb|1VIW|B Chain B, Tenebrio Molitor Alpha-Amylase-Inhibitor Complex Length = 205 Back     alignment and structure
>pdb|1Q8O|A Chain A, Pterocartpus Angolensis Lectin Pal In Complex With The Dimmanoside Man(Alpha1-2)man Length = 252 Back     alignment and structure
>pdb|1UZY|A Chain A, Erythrina Crystagalli Lectin Length = 242 Back     alignment and structure
>pdb|1N3O|A Chain A, Pterocarcpus Angolensis Lectin In Complex With Alpha-Methyl Glucose Length = 252 Back     alignment and structure
>pdb|1LTE|A Chain A, Structure Of A Legume Lectin With An Ordered N-Linked Carbohydrate In Complex With Lactose Length = 239 Back     alignment and structure
>pdb|1AX0|A Chain A, Erythrina Corallodendron Lectin In Complex With N-Actylgalactosamine Length = 239 Back     alignment and structure
>pdb|1GZ9|A Chain A, High-Resolution Crystal Structure Of Erythrina Cristagalli Lectin In Complex With 2'-Alpha-L-Fucosyllactose Length = 239 Back     alignment and structure
>pdb|1FYU|A Chain A, Crystal Structure Of Erythrina Corallodendron Lectin In Hexagonal Crystal Form Length = 255 Back     alignment and structure
>pdb|2LAL|A Chain A, Crystal Structure Determination And Refinement At 2.3 Angstroms Resolution Of The Lentil Lectin Length = 181 Back     alignment and structure
>pdb|1RIN|A Chain A, X-Ray Crystal Structure Of A Pea Lectin-Trimannoside Complex At 2.6 Angstroms Resolution Length = 180 Back     alignment and structure
>pdb|2LTN|A Chain A, Design, Expression, And Crystallization Of Recombinant Lectin From The Garden Pea (Pisum Sativum) Length = 181 Back     alignment and structure
>pdb|1OFS|A Chain A, Pea Lectin-sucrose Complex Length = 187 Back     alignment and structure
>pdb|1LOF|C Chain C, X-Ray Structure Of A Biantennary Octasaccharide-Lectin Complex At 2.3 Angstroms Resolution Length = 181 Back     alignment and structure
>pdb|1LGC|A Chain A, Interaction Of A Legume Lectin With The N2 Fragment Of Human Lactotransferrin Or With The Isolated Biantennary Glycopeptide: Role Of The Fucose Moiety Length = 181 Back     alignment and structure
>pdb|1LOA|A Chain A, Three-Dimensional Structures Of Complexes Of Lathyrus Ochrus Isolectin I With Glucose And Mannose: Fine Specificity Of The Monosaccharide-Binding Site Length = 181 Back     alignment and structure
>pdb|1LGB|A Chain A, Interaction Of A Legume Lectin With The N2 Fragment Of Human Lactotransferrin Or With The Isolated Biantennary Glycopeptide: Role Of The Fucose Moiety Length = 181 Back     alignment and structure
>pdb|2EIG|A Chain A, Lotus Tetragonolobus Seed Lectin (Isoform) Length = 234 Back     alignment and structure
>pdb|2B7Y|A Chain A, Fava Bean Lectin-Glucose Complex Length = 182 Back     alignment and structure
>pdb|1GSL|A Chain A, Lectin (Fourth Isolated From (Griffonia Simplicifolia)) Complex With Y Human Blood Group Determinant Length = 243 Back     alignment and structure
>pdb|1FX5|A Chain A, Crystal Structure Analysis Of Ulex Europaeus Lectin I Length = 242 Back     alignment and structure
>pdb|1IOA|A Chain A, Arcelin-5, A Lectin-Like Defense Protein From Phaseolus Vulgaris Length = 240 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query262
3ipv_A251 Lectin alpha chain; galactose binding, SEED lectin 5e-49
1g7y_A253 Stem/LEAF lectin DB58; jelly roll fold, sugar bind 9e-49
2bqp_A234 Protein (PEA lectin); D-glucopyranose complex, sug 1e-47
1v6i_A232 Agglutinin, PNA, galactose-binding lectin; open qu 1e-47
1hql_A257 Lectin; xenograft antigen, sugar BI protein; HET: 9e-47
1fat_A252 Phytohemagglutinin-L; glycoprotein, plant defense 2e-46
3zyr_A261 Lectin; sugar binding protein, N-glycan; HET: NAG 3e-46
2eig_A234 Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG bin 4e-46
1fny_A237 BARK lectin, BARK agglutinin I,polypeptide A; legu 2e-45
2fmd_A240 Lectin, agglutinin, BMA; legume lectin, beta sandw 5e-45
1fx5_A242 UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HO 4e-44
1avb_A226 Arcelin-1; lectin-like glycoprotein, plant defense 4e-44
1gzc_A239 Erythrina crista-galli lectin; carbohydrate, sugar 4e-44
1gsl_A243 Griffonia simplicifolia lectin 4; glycoprotein, ma 6e-44
1sbf_A253 Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {G 2e-43
1wbf_A242 Protein (agglutinin); lectin (agglutinin), legume 3e-43
1qnw_A242 Chitin binding lectin, UEA-II; carbohydrate bindin 5e-43
1dbn_A239 MAL, protein (leukoagglutinin); plant lectin, carb 7e-43
1n47_A233 Isolectin B4; cancer antigen, vicia villosa lectin 3e-42
1dhk_B223 Bean lectin-like inhibitor, porcine pancreatic alp 2e-40
1ioa_A240 Arcelin-5A, ARC5A; lectin-like proteins, plant def 6e-40
1f9k_A238 Acidic lectin; legume lectin, glycosylated protein 3e-38
2ltn_A181 PEA lectin, alpha chain; 1.70A {Pisum sativum} SCO 4e-37
1qmo_E133 Mannose binding lectin, FRIL; crosslink, hematopoi 7e-26
1nls_A 237 Concanavalin A; lectin, agglutinin; 0.94A {Canaval 1e-21
1nls_A237 Concanavalin A; lectin, agglutinin; 0.94A {Canaval 3e-13
1qmo_A113 Mannose binding lectin, FRIL; crosslink, hematopoi 2e-20
1gv9_A260 P58/ergic-53; lectin, carbohydrate binding; 1.46A 6e-13
2dur_A253 VIP36;, vesicular integral-membrane protein VIP36; 3e-12
2ltn_B52 PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP 2e-08
>3ipv_A Lectin alpha chain; galactose binding, SEED lectin, hemagglutinin, legume lectin fungal, sugar binding protein; 2.04A {Spatholobus parviflorus} PDB: 3ipv_B 3usu_B* 3usu_A* Length = 251 Back     alignment and structure
 Score =  161 bits (408), Expect = 5e-49
 Identities = 68/254 (26%), Positives = 100/254 (39%), Gaps = 33/254 (12%)

Query: 21  ALKFAFDGFNTSK--LLLYGNAKLDS-GAISLTQDT------TFSIGRALYHAKIPLKHT 71
              F F  F   +  L+L G+A +   G + LT           S+GRA Y A I +  +
Sbjct: 3   ETSFVFSKFKPLEPNLILQGDALVTVAGVLQLTNVDKNGVPEPSSLGRATYSAPINIWDS 62

Query: 72  NSSTIRSFETSFTFSITPYNGQRPGHGLVFIFVPSADIQGAAASQYLGFLNRTNDGNRNN 131
            +  + SF TSF F+I   N      GL F   P A    +    +LG  +    G+   
Sbjct: 63  ATGLVASFATSFRFTIYAPNIATIADGLAFFLAPVASAPDSG-GGFLGLFDSAVSGSTYQ 121

Query: 132 NVFGIEFDIVQNQEFYDINNNHVGLNVNSIISVTAYKAGYWFQDNQNKTNWWHFHALKLN 191
               +EFD  +N  F D    H+G +VNSI S+                         L 
Sbjct: 122 -TVAVEFDTYENTVFTDPPYTHIGFDVNSISSI-------------------KTVKWSLA 161

Query: 192 NGKIYRVWIDYKDSFLGVSIAPAKMKKPLWPLLNVFIDLSDFFLDEMYAGFCAATGQLIG 251
           NG+  +V I Y  +   +  +          +L   +DLS    + +  GF AATG   G
Sbjct: 162 NGEAAKVLITYNSAVKLLVASLVYPSSKTSFILADIVDLSSVLPEWVRVGFSAATGASGG 221

Query: 252 N---HKILSWSFSN 262
               H + SWSF++
Sbjct: 222 KIETHDVFSWSFAS 235
>1g7y_A Stem/LEAF lectin DB58; jelly roll fold, sugar binding protein; HET: NAG FUC FUL; 2.50A {Vigna unguiculata subsp} SCOP: b.29.1.1 PDB: 1lul_A 1lu1_A* 1bjq_A* 1lu2_A* Length = 253 Back     alignment and structure
>2bqp_A Protein (PEA lectin); D-glucopyranose complex, sugar binding protein; HET: GLC; 1.90A {Pisum sativum} SCOP: b.29.1.1 Length = 234 Back     alignment and structure
>1v6i_A Agglutinin, PNA, galactose-binding lectin; open quaternary association, orthorhombic, carbohydrate specificity, protein crystallography; HET: GAL GLC; 2.15A {Arachis hypogaea} SCOP: b.29.1.1 PDB: 1bzw_A* 1v6j_A* 1v6k_A* 1v6l_A* 1v6m_A 1v6n_A 1v6o_A 2dva_A* 1cq9_A 1ciw_A* 1qf3_A* 1rir_A* 1rit_A* 2dh1_A 1cr7_A* 2dv9_A* 2dvb_A* 2dvd_A* 2dvf_A 2dvg_A* ... Length = 232 Back     alignment and structure
>1hql_A Lectin; xenograft antigen, sugar BI protein; HET: GLA MBG NAG; 2.20A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1gnz_A* Length = 257 Back     alignment and structure
>1fat_A Phytohemagglutinin-L; glycoprotein, plant defense protein, lectin; HET: NAG; 2.80A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1g8w_A* Length = 252 Back     alignment and structure
>3zyr_A Lectin; sugar binding protein, N-glycan; HET: NAG BMA MAN GOL; 1.65A {Platypodium elegans} PDB: 3zvx_A* 1ukg_A* 1q8o_A* 1q8q_A* 1q8s_A* 1q8v_A* 1q8p_A* 2auy_A* 2gme_A 2gmm_A* 2gmp_A* 2gn3_A* 2gn7_A* 2gnb_A* 2gnd_A* 2gnm_A* 2gnt_A 2phf_A* 2phr_A* 2pht_A* ... Length = 261 Back     alignment and structure
>2eig_A Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG binding protein; HET: NAG; 2.00A {Lotus tetragonolobus} Length = 234 Back     alignment and structure
>1fny_A BARK lectin, BARK agglutinin I,polypeptide A; legume lectin, jelly roll, sugar binding protein; 1.81A {Robinia pseudoacacia} SCOP: b.29.1.1 PDB: 1fnz_A* Length = 237 Back     alignment and structure
>2fmd_A Lectin, agglutinin, BMA; legume lectin, beta sandwich, protein-carbohydrate complex, sugar binding protein; HET: MAN; 1.90A {Bowringia mildbraedii} Length = 240 Back     alignment and structure
>1fx5_A UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HOMO-dimer, fucose specific lectin, SUG binding protein; HET: NAG FUC BMA MAN; 2.20A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1jxn_A* Length = 242 Back     alignment and structure
>1avb_A Arcelin-1; lectin-like glycoprotein, plant defense, insecticidal activi lectin; HET: NAG; 1.90A {Phaseolus vulgaris} SCOP: b.29.1.1 Length = 226 Back     alignment and structure
>1gzc_A Erythrina crista-galli lectin; carbohydrate, sugar binding protein, saccharide, protein-carbohydrate interactions, lactose, glycoprotein; HET: LAT; 1.58A {Erythrina crista-galli} SCOP: b.29.1.1 PDB: 1gz9_A* 1fyu_A* 1ax0_A* 1ax1_A* 1ax2_A* 1axy_A* 1axz_A* 1lte_A* 1sfy_A* 1v00_A* 1uzz_A 1uzy_A* 3n35_A* 3n36_A* 3n3h_A* Length = 239 Back     alignment and structure
>1gsl_A Griffonia simplicifolia lectin 4; glycoprotein, manganese; HET: FUC GAL MAG NAG BMA; 2.00A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1lec_A* 1led_A* Length = 243 Back     alignment and structure
>1sbf_A Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {Glycine max} SCOP: b.29.1.1 PDB: 1sbd_A* 1sbe_A* 1g9f_A* 2sba_A* Length = 253 Back     alignment and structure
>1wbf_A Protein (agglutinin); lectin (agglutinin), legume lectin, protein crystallography, group specificity, saccharide free form; HET: NAG; 2.30A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 2d3s_A* 2dtw_A* 1wbl_A* 2dty_A* 2du0_A* 2du1_A* 2e51_A* 2e53_A* 2zmk_A* 2zml_A* 2zmn_A* 2e7t_A* 2e7q_A* Length = 242 Back     alignment and structure
>1qnw_A Chitin binding lectin, UEA-II; carbohydrate binding; HET: NAG; 2.35A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1dzq_A* 1qoo_A* 1qos_A* 1qot_A* Length = 242 Back     alignment and structure
>1dbn_A MAL, protein (leukoagglutinin); plant lectin, carbohydrate binding, sialyllactose, sugar BIN protein; HET: NAG SIA GAL BGC; 2.75A {Maackia amurensis} SCOP: b.29.1.1 Length = 239 Back     alignment and structure
>1n47_A Isolectin B4; cancer antigen, vicia villosa lectin, glycoprotein TN-bindin protein, carbohydrate recognition, sugar binding protein; HET: NAG FUC TNR; 2.70A {Vicia villosa} SCOP: b.29.1.1 Length = 233 Back     alignment and structure
>1dhk_B Bean lectin-like inhibitor, porcine pancreatic alpha-amylase; CO (hydrolase-inhibitor), complex (hydrolase-inhibitor) comple; HET: NAG; 1.85A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1viw_B* Length = 223 Back     alignment and structure
>1ioa_A Arcelin-5A, ARC5A; lectin-like proteins, plant defense proteins, lectin; HET: NAG FUC; 2.70A {Phaseolus vulgaris} SCOP: b.29.1.1 Length = 240 Back     alignment and structure
>1f9k_A Acidic lectin; legume lectin, glycosylated protein, H-antigenic specificity agglutinin, sugar binding protein; HET: NAG MAN AMG; 3.00A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 1fay_A* Length = 238 Back     alignment and structure
>2ltn_A PEA lectin, alpha chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1bqp_A* 1hkd_A 1ofs_A* 1rin_A* 1lof_C* 1len_A 1lem_A 1les_A* 2lal_A 1loe_A 1loa_A* 1loc_A* 1lod_A* 1lob_A 1lof_A* 1log_A* 1lgc_A* 1lgb_A* 2b7y_A* Length = 181 Back     alignment and structure
>1qmo_E Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1 Length = 133 Back     alignment and structure
>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ... Length = 237 Back     alignment and structure
>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ... Length = 237 Back     alignment and structure
>1qmo_A Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1 Length = 113 Back     alignment and structure
>1gv9_A P58/ergic-53; lectin, carbohydrate binding; 1.46A {Rattus norvegicus} SCOP: b.29.1.13 PDB: 1r1z_A 3a4u_A 3lcp_A Length = 260 Back     alignment and structure
>2dur_A VIP36;, vesicular integral-membrane protein VIP36; beta sandwich, carbohydrate binding protein, cargo receptor, transport; HET: MAN; 1.65A {Canis lupus familiaris} PDB: 2dup_A 2duq_A* 2duo_A* 2e6v_A* Length = 253 Back     alignment and structure
>2ltn_B PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1hkd_B 1rin_B* 1ofs_B* 1bqp_B* 1loe_B 1loa_B* 1loc_B* 1lod_B* 1lob_B 1lof_B* 1log_B* 1lof_D* 1les_B* 2b7y_B* 1lgc_B* 1lgb_B* 1len_B 1lem_B 2lal_B Length = 52 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query262
3ujo_A281 Legume lectin; carbohydrate-binding, galactose, ad 100.0
3ipv_A251 Lectin alpha chain; galactose binding, SEED lectin 100.0
3zyr_A261 Lectin; sugar binding protein, N-glycan; HET: NAG 100.0
2bqp_A234 Protein (PEA lectin); D-glucopyranose complex, sug 100.0
1dbn_A239 MAL, protein (leukoagglutinin); plant lectin, carb 100.0
2fmd_A240 Lectin, agglutinin, BMA; legume lectin, beta sandw 100.0
1fny_A237 BARK lectin, BARK agglutinin I,polypeptide A; legu 100.0
1v6i_A232 Agglutinin, PNA, galactose-binding lectin; open qu 100.0
1g7y_A253 Stem/LEAF lectin DB58; jelly roll fold, sugar bind 100.0
1fx5_A242 UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HO 100.0
1qnw_A242 Chitin binding lectin, UEA-II; carbohydrate bindin 100.0
1hql_A257 Lectin; xenograft antigen, sugar BI protein; HET: 100.0
1gzc_A239 Erythrina crista-galli lectin; carbohydrate, sugar 100.0
2eig_A234 Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG bin 100.0
1sbf_A253 Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {G 100.0
1fat_A252 Phytohemagglutinin-L; glycoprotein, plant defense 100.0
1gsl_A243 Griffonia simplicifolia lectin 4; glycoprotein, ma 100.0
1n47_A233 Isolectin B4; cancer antigen, vicia villosa lectin 100.0
1f9k_A238 Acidic lectin; legume lectin, glycosylated protein 100.0
1wbf_A242 Protein (agglutinin); lectin (agglutinin), legume 100.0
1avb_A226 Arcelin-1; lectin-like glycoprotein, plant defense 100.0
1ioa_A240 Arcelin-5A, ARC5A; lectin-like proteins, plant def 100.0
1dhk_B223 Bean lectin-like inhibitor, porcine pancreatic alp 100.0
2ltn_A181 PEA lectin, alpha chain; 1.70A {Pisum sativum} SCO 100.0
2dur_A253 VIP36;, vesicular integral-membrane protein VIP36; 100.0
1gv9_A260 P58/ergic-53; lectin, carbohydrate binding; 1.46A 100.0
1qmo_E133 Mannose binding lectin, FRIL; crosslink, hematopoi 100.0
2a6y_A256 EMP47P (FORM1); beta sandwich, carbohydrate bindin 100.0
1nls_A 237 Concanavalin A; lectin, agglutinin; 0.94A {Canaval 99.97
2a6z_A222 EMP47P (FORM2); beta sandwich, carbohydrate bindin 99.96
1qmo_A113 Mannose binding lectin, FRIL; crosslink, hematopoi 99.94
2a6v_A226 EMP46P; beta sandwich, carbohydrate binding protei 99.93
1nls_A237 Concanavalin A; lectin, agglutinin; 0.94A {Canaval 99.88
2ltn_B52 PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP 99.5
>3ujo_A Legume lectin; carbohydrate-binding, galactose, adenine binding protein; HET: ADE GAL; 2.00A {Dolichos lablab} PDB: 3ujq_A* 3uk9_A* 3ul2_A* 1fat_A* 1g8w_A* Back     alignment and structure
Probab=100.00  E-value=5.5e-62  Score=433.34  Aligned_cols=222  Identities=30%  Similarity=0.557  Sum_probs=197.2

Q ss_pred             ccCCceeEEeCCCCCCCeEEEeceEEeCCeEEeCCCCCC------cEEEEEeCCceecccCCCCCeeeeEEEEEEEEecC
Q 024824           17 QSTGALKFAFDGFNTSKLLLYGNAKLDSGAISLTQDTTF------SIGRALYHAKIPLKHTNSSTIRSFETSFTFSITPY   90 (262)
Q Consensus        17 ~~~~~~~f~~~~F~~~~~~l~G~A~i~~~~i~LT~~~~~------~~G~~~y~~pi~l~~~~~~~~~sFst~F~F~I~~~   90 (262)
                      .++..++|+|+.|+.+++.|+|+|.+.++.||||++..+      +.|||+|++||+||++.+++++||+|+|+|.|.++
T Consensus        22 ~sa~~~sF~f~~F~~~nL~l~GdA~i~~g~L~LT~~~~~~~p~~~s~Gra~Y~~Pi~l~d~~tg~vaSFsTsFsF~I~~~  101 (281)
T 3ujo_A           22 ASANLISFTFKKFNETNLILQRDATVSSGKLRITKAAENGVPTAGSLGRAFYSTPIQIWDNTTGTVASWATSFTFNLQAP  101 (281)
T ss_dssp             --CEEEEEEESSCCSTTEEECSSCCCBTTBEECSCCCSSCCCCSSCEEEEEESSCEECBCSSSCCBEEEEEEEEEECCCS
T ss_pred             CcCCcceEEcCCCCccCEEEecceEEeCCEEEeCCCCCCCcccCCceEEEEECCCEEcccCCCCCceeEEEEEEEEEecC
Confidence            477889999999998999999999999999999998765      99999999999999999999999999999999987


Q ss_pred             CCCCCCcceEEEEeeCCCCCCCCCCCccCCCCcCCCCCCCCcEEEEEEeeeccccccCCCCCeeEEEcCCccccceeecc
Q 024824           91 NGQRPGHGLVFIFVPSADIQGAAASQYLGFLNRTNDGNRNNNVFGIEFDIVQNQEFYDINNNHVGLNVNSIISVTAYKAG  170 (262)
Q Consensus        91 ~~~~~gdGlAF~l~~~~~~~~~~~G~~lGl~~~~~~~~~~~~~~AVEFDT~~N~~~~Dp~~~HIgi~~ns~~s~~~~~~~  170 (262)
                      ....+||||||+|+|.+..| +..||||||++..++ ++.++.|||||||++|.++ ||+++|||||+|++.|.++.+  
T Consensus       102 ~~~~~gdGlAF~laP~~~~p-~~~gg~LGL~n~~~~-~~~n~~vAVEFDT~~N~e~-Dp~~nHVGIDvNSi~S~~t~~--  176 (281)
T 3ujo_A          102 NAASPADGLAFALVPVGSQP-KDKGGFLGLFDSKNY-ASSNQTVAVEFDTFYNGGW-DPTERHIGIDVNSIKSIKTTS--  176 (281)
T ss_dssp             STTSCCEEEEEEEEETTCCC-CCCGGGTTTCSCSSC-CTTSCCEEEEECCSCCCSS-CCSSSEEEEEESSSCCSCEEE--
T ss_pred             CCCCCCCceEEEEecCCCCC-CCCcceeeeccccCC-CccCcEEEEEEeccccccC-CCCCCeEEEEcCCCCcccccc--
Confidence            66679999999999987544 467899999987655 5678999999999999886 999999999999998887654  


Q ss_pred             eeecCCCCCcccceeeeeeecCCceEEEEEEEe--CCeeEEEEEeCCCCCCCCceEEEEecCCCCCCCcEEEEEEeeccC
Q 024824          171 YWFQDNQNKTNWWHFHALKLNNGKIYRVWIDYK--DSFLGVSIAPAKMKKPLWPLLNVFIDLSDFFLDEMYAGFCAATGQ  248 (262)
Q Consensus       171 ~~~~~~g~~~~~~~~~~~~l~~G~~~~v~I~Y~--~~~L~V~l~~~~~~~~~~~~ls~~vdL~~~l~~~~~vGFSAsTG~  248 (262)
                       |                .+.+|+.++|||+|+  +++|+|++.+.+.  +++|+|++.+||+++||++|||||||+||.
T Consensus       177 -~----------------~l~~G~~~~vwI~Yd~~tk~L~V~l~~~~~--~~~~~lS~~vDL~~~L~e~v~VGFSAsTG~  237 (281)
T 3ujo_A          177 -W----------------DFANGENAEVLITYDSSTNLLVASLVHPSQ--KTSFIVSERVDLTSVLPEWVSVGFSATTGL  237 (281)
T ss_dssp             -C----------------CCCSSCCEEEEEEECTTTCEEEEEEECTTT--CCCEEEEEECCSTTTSCSEEEEEEEEEECS
T ss_pred             -c----------------cccCCCEEEEEEEEeCCCCEEEEEEecCCC--CCCceEEEEechHHhccCcEEEEEEeecCC
Confidence             3                255789999999994  6899999997653  557899999999999999999999999996


Q ss_pred             ---cccceEEEEEEEeC
Q 024824          249 ---LIGNHKILSWSFSN  262 (262)
Q Consensus       249 ---~~~~h~I~sWsF~~  262 (262)
                         ..|.|+|++|+|++
T Consensus       238 ~~~~~e~H~IlsWSFss  254 (281)
T 3ujo_A          238 SKGYVETNEVLSWSFAS  254 (281)
T ss_dssp             STTSCCCCEEEEEEEEE
T ss_pred             CCcccceeEEEEEEEEE
Confidence               68999999999974
>3ipv_A Lectin alpha chain; galactose binding, SEED lectin, hemagglutinin, legume lectin fungal, sugar binding protein; 2.04A {Spatholobus parviflorus} PDB: 3ipv_B 3usu_B* 3usu_A* Back     alignment and structure
>3zyr_A Lectin; sugar binding protein, N-glycan; HET: NAG BMA MAN GOL; 1.65A {Platypodium elegans} SCOP: b.29.1.1 PDB: 3zvx_A* 1ukg_A* 1q8o_A* 1q8q_A* 1q8s_A* 1q8v_A* 1q8p_A* 2auy_A* 2gme_A 2gmm_A* 2gmp_A* 2gn3_A* 2gn7_A* 2gnb_A* 2gnd_A* 2gnm_A* 2gnt_A 2phf_A* 2phr_A* 2pht_A* ... Back     alignment and structure
>2bqp_A Protein (PEA lectin); D-glucopyranose complex, sugar binding protein; HET: GLC; 1.90A {Pisum sativum} SCOP: b.29.1.1 Back     alignment and structure
>1dbn_A MAL, protein (leukoagglutinin); plant lectin, carbohydrate binding, sialyllactose, sugar BIN protein; HET: NAG SIA GAL BGC; 2.75A {Maackia amurensis} SCOP: b.29.1.1 Back     alignment and structure
>2fmd_A Lectin, agglutinin, BMA; legume lectin, beta sandwich, protein-carbohydrate complex, sugar binding protein; HET: MAN; 1.90A {Bowringia mildbraedii} Back     alignment and structure
>1fny_A BARK lectin, BARK agglutinin I,polypeptide A; legume lectin, jelly roll, sugar binding protein; 1.81A {Robinia pseudoacacia} SCOP: b.29.1.1 PDB: 1fnz_A* Back     alignment and structure
>1v6i_A Agglutinin, PNA, galactose-binding lectin; open quaternary association, orthorhombic, carbohydrate specificity, protein crystallography; HET: GAL GLC; 2.15A {Arachis hypogaea} SCOP: b.29.1.1 PDB: 1bzw_A* 1v6j_A* 1v6k_A* 1v6l_A* 1v6m_A 1v6n_A 1v6o_A 2dva_A* 1cq9_A 1ciw_A* 1qf3_A* 1rir_A* 1rit_A* 2dh1_A 1cr7_A* 2dv9_A* 2dvb_A* 2dvd_A* 2dvf_A 2dvg_A* ... Back     alignment and structure
>1g7y_A Stem/LEAF lectin DB58; jelly roll fold, sugar binding protein; HET: NAG FUC FUL; 2.50A {Vigna unguiculata subsp} SCOP: b.29.1.1 PDB: 1lul_A 1lu1_A* 1bjq_A* 1lu2_A* Back     alignment and structure
>1fx5_A UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HOMO-dimer, fucose specific lectin, SUG binding protein; HET: NAG FUC BMA MAN; 2.20A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1jxn_A* Back     alignment and structure
>1qnw_A Chitin binding lectin, UEA-II; carbohydrate binding; HET: NAG; 2.35A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1dzq_A* 1qoo_A* 1qos_A* 1qot_A* Back     alignment and structure
>1hql_A Lectin; xenograft antigen, sugar BI protein; HET: GLA MBG NAG; 2.20A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1gnz_A* Back     alignment and structure
>1gzc_A Erythrina crista-galli lectin; carbohydrate, sugar binding protein, saccharide, protein-carbohydrate interactions, lactose, glycoprotein; HET: LAT; 1.58A {Erythrina crista-galli} SCOP: b.29.1.1 PDB: 1gz9_A* 1fyu_A* 1ax0_A* 1ax1_A* 1ax2_A* 1axy_A* 1axz_A* 1lte_A* 1sfy_A* 1v00_A* 1uzz_A 1uzy_A* 3n35_A* 3n36_A* 3n3h_A* Back     alignment and structure
>2eig_A Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG binding protein; HET: NAG; 2.00A {Lotus tetragonolobus} Back     alignment and structure
>1sbf_A Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {Glycine max} SCOP: b.29.1.1 PDB: 1sbd_A* 1sbe_A* 1g9f_A* 2sba_A* Back     alignment and structure
>1fat_A Phytohemagglutinin-L; glycoprotein, plant defense protein, lectin; HET: NAG; 2.80A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1g8w_A* Back     alignment and structure
>1gsl_A Griffonia simplicifolia lectin 4; glycoprotein, manganese; HET: FUC GAL MAG NAG BMA; 2.00A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1lec_A* 1led_A* Back     alignment and structure
>1n47_A Isolectin B4; cancer antigen, vicia villosa lectin, glycoprotein TN-bindin protein, carbohydrate recognition, sugar binding protein; HET: NAG FUC TNR; 2.70A {Vicia villosa} SCOP: b.29.1.1 Back     alignment and structure
>1f9k_A Acidic lectin; legume lectin, glycosylated protein, H-antigenic specificity agglutinin, sugar binding protein; HET: NAG MAN AMG; 3.00A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 1fay_A* Back     alignment and structure
>1wbf_A Protein (agglutinin); lectin (agglutinin), legume lectin, protein crystallography, group specificity, saccharide free form; HET: NAG; 2.30A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 2d3s_A* 2dtw_A* 1wbl_A* 2dty_A* 2du0_A* 2du1_A* 2e51_A* 2e53_A* 2zmk_A* 2zml_A* 2zmn_A* 2e7t_A* 2e7q_A* Back     alignment and structure
>1avb_A Arcelin-1; lectin-like glycoprotein, plant defense, insecticidal activi lectin; HET: NAG; 1.90A {Phaseolus vulgaris} SCOP: b.29.1.1 Back     alignment and structure
>1ioa_A Arcelin-5A, ARC5A; lectin-like proteins, plant defense proteins, lectin; HET: NAG FUC; 2.70A {Phaseolus vulgaris} SCOP: b.29.1.1 Back     alignment and structure
>1dhk_B Bean lectin-like inhibitor, porcine pancreatic alpha-amylase; CO (hydrolase-inhibitor), complex (hydrolase-inhibitor) comple; HET: NAG; 1.85A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1viw_B* Back     alignment and structure
>2ltn_A PEA lectin, alpha chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1bqp_A* 1hkd_A 1ofs_A* 1rin_A* 1lof_C* 1len_A 1lem_A 1les_A* 2lal_A 1loe_A 1loa_A* 1loc_A* 1lod_A* 1lob_A 1lof_A* 1log_A* 1lgc_A* 1lgb_A* 2b7y_A* Back     alignment and structure
>2dur_A VIP36;, vesicular integral-membrane protein VIP36; beta sandwich, carbohydrate binding protein, cargo receptor, transport; HET: MAN; 1.65A {Canis lupus familiaris} PDB: 2dup_A 2duq_A* 2duo_A* 2e6v_A* Back     alignment and structure
>1gv9_A P58/ergic-53; lectin, carbohydrate binding; 1.46A {Rattus norvegicus} SCOP: b.29.1.13 PDB: 1r1z_A 3a4u_A 3lcp_A Back     alignment and structure
>1qmo_E Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1 Back     alignment and structure
>2a6y_A EMP47P (FORM1); beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.42A {Saccharomyces cerevisiae} SCOP: b.29.1.13 Back     alignment and structure
>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ... Back     alignment and structure
>2a6z_A EMP47P (FORM2); beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.00A {Saccharomyces cerevisiae} SCOP: b.29.1.13 PDB: 2a70_A 2a71_A Back     alignment and structure
>1qmo_A Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1 Back     alignment and structure
>2a6v_A EMP46P; beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.52A {Saccharomyces cerevisiae} SCOP: b.29.1.13 PDB: 2a6w_A 2a6x_A Back     alignment and structure
>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ... Back     alignment and structure
>2ltn_B PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1hkd_B 1rin_B* 1ofs_B* 1bqp_B* 1loe_B 1loa_B* 1loc_B* 1lod_B* 1lob_B 1lof_B* 1log_B* 1lof_D* 1les_B* 2b7y_B* 1lgc_B* 1lgb_B* 1len_B 1lem_B 2lal_B Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 262
d1g7ya_253 b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos 3e-49
d1hqla_236 b.29.1.1 (A:) Legume lectin {Griffonia simplicifol 1e-48
d1g8wa_233 b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar 7e-48
d1qnwa_237 b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus 1e-47
d1gzca_239 b.29.1.1 (A:) Legume lectin {Cockspur coral tree ( 6e-47
d1g9fa_251 b.29.1.1 (A:) Legume lectin {Soybean (Glycine max) 1e-46
d1avba_226 b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar 2e-45
d1ukga_241 b.29.1.1 (A:) Legume lectin {Bloodwood tree (Ptero 2e-45
d1dbna_239 b.29.1.1 (A:) Legume lectin {Maackia amurensis, le 1e-44
d1leda_243 b.29.1.1 (A:) Legume lectin {West-central african 2e-44
d2d3sa1237 b.29.1.1 (A:1-237) Legume lectin {Winged bean (Pso 3e-44
g2ltn.1229 b.29.1.1 (A:,B:) Legume lectin {Garden pea (Pisum 5e-44
d1v6ia_232 b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypog 5e-44
d1f9ka_234 b.29.1.1 (A:) Legume lectin {Winged bean (Psophoca 3e-43
d1fx5a_240 b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus 6e-43
d1fnya_237 b.29.1.1 (A:) Legume lectin {Black locust (Robinia 2e-42
d1n47a_233 b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia vi 3e-42
g1qmo.1230 b.29.1.1 (A:,E:) Legume lectin {Field bean (Dolich 5e-42
d1dhkb_204 b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also ar 2e-38
d1ioaa_228 b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar 2e-38
d1nlsa_ 237 b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia 3e-27
d1nlsa_237 b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia 5e-18
d1gv9a_228 b.29.1.13 (A:) Carbohydrate-recognition domain of 7e-22
d2a6za1221 b.29.1.13 (A:7-227) Emp47p N-terminal domain {Bake 8e-08
d2a6va1218 b.29.1.13 (A:9-226) Emp46p N-terminal domain {Bake 6e-07
>d1g7ya_ b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]} Length = 253 Back     information, alignment and structure

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]

 Score =  161 bits (407), Expect = 3e-49
 Identities = 62/247 (25%), Positives = 108/247 (43%), Gaps = 31/247 (12%)

Query: 24  FAFDGFNTSKLLLYGNAKLDSGAISLTQD------TTFSIGRALYHAKIPLKHTNSSTIR 77
           F+F  FN+S  +L G+A + S  + LT+       T  S+GRA Y + I +   ++  + 
Sbjct: 6   FSFKNFNSSSFILQGDATVSSSKLRLTKVKGNGLPTLSSLGRAFYSSPIQIYDKSTGAVA 65

Query: 78  SFETSFTFSITPYNGQRPGHGLVFIFVPSADIQGAAASQYLGFLNRTNDGNRNNNVFGIE 137
           S+ TSFT +I   N      G+ F  VP       + S +LG  +     N +     +E
Sbjct: 66  SWATSFTANIFAPNKSSSADGIAFALVPVGSEPK-SNSGFLGVFDSDVYDN-SAQTVAVE 123

Query: 138 FDIVQNQEFYDINNNHVGLNVNSIISVTAYKAGYWFQDNQNKTNWWHFHALKLNNGKIYR 197
           FD   N ++ D  + H+G++VNSI S+                      +  L NG+   
Sbjct: 124 FDTFSNTDW-DPTSRHIGIDVNSIKSI-------------------RTASWGLANGQNAE 163

Query: 198 VWIDYKDSFLGVSIAPAKMKKPLWPLLNVFIDLSDFFLDEMYAGFCAATG---QLIGNHK 254
           + I Y  +   +  +     +    +++  +D+++   + +  GF A TG        H 
Sbjct: 164 ILITYNAATSLLVASLVHPSRRTSYIVSERVDITNELPEYVSIGFSATTGLSEGYTETHD 223

Query: 255 ILSWSFS 261
           +LSWSF+
Sbjct: 224 VLSWSFA 230
>d1hqla_ b.29.1.1 (A:) Legume lectin {Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]} Length = 236 Back     information, alignment and structure
>d1g8wa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 233 Back     information, alignment and structure
>d1qnwa_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-II [TaxId: 3902]} Length = 237 Back     information, alignment and structure
>d1gzca_ b.29.1.1 (A:) Legume lectin {Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]} Length = 239 Back     information, alignment and structure
>d1g9fa_ b.29.1.1 (A:) Legume lectin {Soybean (Glycine max) [TaxId: 3847]} Length = 251 Back     information, alignment and structure
>d1avba_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 226 Back     information, alignment and structure
>d1ukga_ b.29.1.1 (A:) Legume lectin {Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]} Length = 241 Back     information, alignment and structure
>d1dbna_ b.29.1.1 (A:) Legume lectin {Maackia amurensis, leukoagglutinin [TaxId: 37501]} Length = 239 Back     information, alignment and structure
>d1leda_ b.29.1.1 (A:) Legume lectin {West-central african legume (Griffonia simplicifolia) [TaxId: 3850]} Length = 243 Back     information, alignment and structure
>d2d3sa1 b.29.1.1 (A:1-237) Legume lectin {Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]} Length = 237 Back     information, alignment and structure
>d1v6ia_ b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 232 Back     information, alignment and structure
>d1f9ka_ b.29.1.1 (A:) Legume lectin {Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]} Length = 234 Back     information, alignment and structure
>d1fx5a_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-I [TaxId: 3902]} Length = 240 Back     information, alignment and structure
>d1fnya_ b.29.1.1 (A:) Legume lectin {Black locust (Robinia pseudoacacia) [TaxId: 35938]} Length = 237 Back     information, alignment and structure
>d1n47a_ b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]} Length = 233 Back     information, alignment and structure
>d1dhkb_ b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 204 Back     information, alignment and structure
>d1ioaa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]} Length = 228 Back     information, alignment and structure
>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]} Length = 237 Back     information, alignment and structure
>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]} Length = 237 Back     information, alignment and structure
>d1gv9a_ b.29.1.13 (A:) Carbohydrate-recognition domain of P58/ERGIC-53 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 228 Back     information, alignment and structure
>d2a6za1 b.29.1.13 (A:7-227) Emp47p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 221 Back     information, alignment and structure
>d2a6va1 b.29.1.13 (A:9-226) Emp46p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 218 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query262
d1hqla_236 Legume lectin {Griffonia simplicifolia, lectin I-b 100.0
d1leda_243 Legume lectin {West-central african legume (Griffo 100.0
d1fx5a_240 Legume lectin {Furze (Ulex europaeus), UEA-I [TaxI 100.0
d1g7ya_253 Legume lectin {Horse gram (Dolichos biflorus), dif 100.0
d1gzca_239 Legume lectin {Cockspur coral tree (Erythrina cris 100.0
d1g8wa_233 Phytohemagglutinin-L, PHA-L, also arcelin {Kidney 100.0
d1qnwa_237 Legume lectin {Furze (Ulex europaeus), UEA-II [Tax 100.0
d2d3sa1237 Legume lectin {Winged bean (Psophocarpus tetragono 100.0
d1g9fa_251 Legume lectin {Soybean (Glycine max) [TaxId: 3847] 100.0
g1qmo.1230 Legume lectin {Field bean (Dolichos lablab), Fril 100.0
d1dbna_239 Legume lectin {Maackia amurensis, leukoagglutinin 100.0
d1v6ia_232 Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3 100.0
d1fnya_237 Legume lectin {Black locust (Robinia pseudoacacia) 100.0
d1n47a_233 Legume lectin {Hairy vetch (Vicia villosa), isolec 100.0
d1f9ka_234 Legume lectin {Winged bean (Psophocarpus tetragono 100.0
g2ltn.1229 Legume lectin {Garden pea (Pisum sativum) [TaxId: 100.0
d1ukga_241 Legume lectin {Bloodwood tree (Pterocarpus angolen 100.0
d1avba_226 Phytohemagglutinin-L, PHA-L, also arcelin {Kidney 100.0
d1ioaa_228 Phytohemagglutinin-L, PHA-L, also arcelin {Kidney 100.0
d1dhkb_204 Phytohemagglutinin-L, PHA-L, also arcelin {Kidney 100.0
d1gv9a_228 Carbohydrate-recognition domain of P58/ERGIC-53 {R 100.0
d1nlsa_ 237 Concanavalin A {Jack bean (Canavalia ensiformis) [ 99.97
d2a6za1221 Emp47p N-terminal domain {Baker's yeast (Saccharom 99.96
d2a6va1218 Emp46p N-terminal domain {Baker's yeast (Saccharom 99.96
d1nlsa_237 Concanavalin A {Jack bean (Canavalia ensiformis) [ 99.88
d1oq1a_223 Hypothetical protein YesU {Bacillus subtilis [TaxI 87.68
d1dyka2185 Laminin alpha2 chain {Mouse (Mus musculus) [TaxId: 80.82
>d1hqla_ b.29.1.1 (A:) Legume lectin {Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]} Back     information, alignment and structure
class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]

Probab=100.00  E-value=1.2e-56  Score=390.21  Aligned_cols=221  Identities=30%  Similarity=0.536  Sum_probs=191.5

Q ss_pred             ceeEEeCCCCC---CCeEEEeceEEeCCeEEeCCCC------CCcEEEEEeCCceecccCCCCCeeeeEEEEEEEEecCC
Q 024824           21 ALKFAFDGFNT---SKLLLYGNAKLDSGAISLTQDT------TFSIGRALYHAKIPLKHTNSSTIRSFETSFTFSITPYN   91 (262)
Q Consensus        21 ~~~f~~~~F~~---~~~~l~G~A~i~~~~i~LT~~~------~~~~G~~~y~~pi~l~~~~~~~~~sFst~F~F~I~~~~   91 (262)
                      +++|+|++|..   +++.|+|+|.+.++.|+||++.      +.++|||+|++||+||+..+++++||+|+|+|+|....
T Consensus         1 ~~sF~f~~F~~~~~~~l~l~G~A~~~~~~l~LT~~~~~~~~~~~s~Gra~y~~Pv~l~~~~t~~~asFsT~F~F~i~~~~   80 (236)
T d1hqla_           1 SVSFTFPNFWSDVEDSIIFQGDANTTAGTLQLCKTNQYGTPLQWSAGRALYSDPVQLWDNKTESVASFYTEFTFFLKITG   80 (236)
T ss_dssp             CCEEEESCSCSCGGGTEEEEETCEEETTEEECSCBCTTSCBCSSCEEEEEESSCEECCCSTTCCCCEEEEEEEEEEEECS
T ss_pred             CEEEEeCCCCCCCcCCEEEeccEEecCCEEEEecCCCCCcccccceEEEEECCCEEeecCCCCceeEEEEEEEEEEeCCC
Confidence            47999999974   5799999999999999999863      46899999999999999999999999999999998753


Q ss_pred             CCCCCcceEEEEeeCCCCCCCCCCCccCCCCcCCCC-CCCCcEEEEEEeeeccccccCCCCCeeEEEcCCccccceeecc
Q 024824           92 GQRPGHGLVFIFVPSADIQGAAASQYLGFLNRTNDG-NRNNNVFGIEFDIVQNQEFYDINNNHVGLNVNSIISVTAYKAG  170 (262)
Q Consensus        92 ~~~~gdGlAF~l~~~~~~~~~~~G~~lGl~~~~~~~-~~~~~~~AVEFDT~~N~~~~Dp~~~HIgi~~ns~~s~~~~~~~  170 (262)
                       ..+||||||+|+|... +.+..|++||+.+..+.+ ...++.+|||||||+|.+++||+++||||++|++.|..+.+  
T Consensus        81 -~~~gDGlAFvl~p~~~-~~~~~G~~lGl~~~~~~~~~~~~~~vAVEFDT~~n~~~~D~~~nHIgIdvns~~s~~~~~--  156 (236)
T d1hqla_          81 -NGPADGLAFFLAPPDS-DVKDAGEYLGLFNKSTATQPSKNQVVAVEFDTWTNPNFPEPSYRHIGINVNSIVSVATKR--  156 (236)
T ss_dssp             -SCCCCEEEEEEECTTC-CCCCCGGGTTTSCTTTTTCGGGCCCEEEEEECSCCSSSCCCSSCEEEEEESSSSCSEEEE--
T ss_pred             -CCCCceEEEEEeCCCC-CCCCCccccccccccccCCcccCceEEEEeeCccCCCCCCCCCCEEEEEcCCcccccccc--
Confidence             4689999999999764 346789999999875543 34678999999999999999999999999999988776543  


Q ss_pred             eeecCCCCCcccceeeeeeecCCceEEEEEEEe--CCeeEEEEEeCCCCCCCCceEEEEecCCCCCCCcEEEEEEeeccC
Q 024824          171 YWFQDNQNKTNWWHFHALKLNNGKIYRVWIDYK--DSFLGVSIAPAKMKKPLWPLLNVFIDLSDFFLDEMYAGFCAATGQ  248 (262)
Q Consensus       171 ~~~~~~g~~~~~~~~~~~~l~~G~~~~v~I~Y~--~~~L~V~l~~~~~~~~~~~~ls~~vdL~~~l~~~~~vGFSAsTG~  248 (262)
                       +             ...++++|+.++|||+|+  +++|+|+|+..   ++..|+|++.|||+++|+++||||||||||.
T Consensus       157 -~-------------~~~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~---~~~~~~ls~~vdL~~~l~~~v~vGFSasTG~  219 (236)
T d1hqla_         157 -W-------------EDSDIFSGKIATARISYDGSAEILTVVLSYP---DGSDYILSHSVDMRQNLPESVRVGISASTGN  219 (236)
T ss_dssp             -C-------------CHHHHTSCSCEEEEEEEETTTTEEEEEEEET---TTEEEEEEEECCGGGTSCSEEEEEEEEECCS
T ss_pred             -c-------------ccccccCCCEEEEEEEEeCCCcEEEEEEecC---CCCCeeEEEEeCHHHhCCCcEEEEEEeECCC
Confidence             2             234588999999999994  78999999864   3667899999999999999999999999997


Q ss_pred             c-ccceEEEEEEEeC
Q 024824          249 L-IGNHKILSWSFSN  262 (262)
Q Consensus       249 ~-~~~h~I~sWsF~~  262 (262)
                      . .+.|+|++|+|++
T Consensus       220 ~~~~~h~I~sWsF~s  234 (236)
T d1hqla_         220 NQFLTVYILSWRFSS  234 (236)
T ss_dssp             CCCEEEEEEEEEEEE
T ss_pred             CCceEEEEEEeEeEe
Confidence            5 6889999999974
>d1leda_ b.29.1.1 (A:) Legume lectin {West-central african legume (Griffonia simplicifolia) [TaxId: 3850]} Back     information, alignment and structure
>d1fx5a_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-I [TaxId: 3902]} Back     information, alignment and structure
>d1g7ya_ b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]} Back     information, alignment and structure
>d1gzca_ b.29.1.1 (A:) Legume lectin {Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]} Back     information, alignment and structure
>d1g8wa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Back     information, alignment and structure
>d1qnwa_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-II [TaxId: 3902]} Back     information, alignment and structure
>d2d3sa1 b.29.1.1 (A:1-237) Legume lectin {Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]} Back     information, alignment and structure
>d1g9fa_ b.29.1.1 (A:) Legume lectin {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d1dbna_ b.29.1.1 (A:) Legume lectin {Maackia amurensis, leukoagglutinin [TaxId: 37501]} Back     information, alignment and structure
>d1v6ia_ b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3818]} Back     information, alignment and structure
>d1fnya_ b.29.1.1 (A:) Legume lectin {Black locust (Robinia pseudoacacia) [TaxId: 35938]} Back     information, alignment and structure
>d1n47a_ b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]} Back     information, alignment and structure
>d1f9ka_ b.29.1.1 (A:) Legume lectin {Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]} Back     information, alignment and structure
>d1ukga_ b.29.1.1 (A:) Legume lectin {Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]} Back     information, alignment and structure
>d1avba_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Back     information, alignment and structure
>d1ioaa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]} Back     information, alignment and structure
>d1dhkb_ b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Back     information, alignment and structure
>d1gv9a_ b.29.1.13 (A:) Carbohydrate-recognition domain of P58/ERGIC-53 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]} Back     information, alignment and structure
>d2a6za1 b.29.1.13 (A:7-227) Emp47p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2a6va1 b.29.1.13 (A:9-226) Emp46p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]} Back     information, alignment and structure
>d1oq1a_ b.29.1.17 (A:) Hypothetical protein YesU {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1dyka2 b.29.1.4 (A:2933-3117) Laminin alpha2 chain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure