Citrus Sinensis ID: 024895

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-
Protein Sequence
MVLFLCFLFFLFSSATACDRCVHQTKVAYFSQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGRGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYNSGVQITDIAKEGCSESECGDGSWK
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHcccccccccEEEEEEEccccccccccccccccccccccccEEEEEcHHHHccccccccEEEEEEccccccccccEEEEEEEccccccccccccHHHHHHHcccccccccccccEEEEEEEEEccccccccEEEEEEcccccccEEEEEEEEcccEEcEEEEEEEEcccccEEEccccccccccccccccccEEEEEEEEEccccEEEEEccccccccccccEEEcccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHcccccccccccccEEEEEccccccccccccccccccccccccccccccHHHccccccccEEEEEEccccHcccccEEEEEEcccccccccccccccHHHHHHHHHHHHHHHHcccEEEEEEEEcccccccEEEEEEEEcccccEEEEEEEEEccccccEEEEEEEEccccccEEccccccccccccccccccEEEEEEEcccccccEEEEccccccccccccEEcccEEHHHHHHcccccccccccccc
Coil and Loop (DISEMBL)
MVLFLCFLFFLfssatacdrcvHQTKVAYFSqasalssgacgygslalsfngghlaagvpslykdgagcgacfqmrcknptlcsgrgtrviltdlnhsnqtdfVISSRAFMALsnqgkgqdilklgvvdveykrvpceyknqnLAVRVEessqkpnyLAVKVLYQGGQTEMVAMDVAQvgssnwgymsrnygavwdtsrvpngalQFRFVVtsgydgkwiwaknvlpadwkpgmiynsgvqitdiakegcsesecgdgswk
Flexible Loop (DISEMBL)
MVLFLCFLFFLFSSATACDRCVHQTKVAYFSQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGRGTRVILTDLNHSNQTDFVISSRAFMALSnqgkgqdilKLGVVDVEYKRVPCEYKNQNLAVrveessqkpnyLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYNSGVQITDIAKegcsesecgdgswk
Low Complexity Region (SEG)
MVlflcflfflfSSATACDRCVHQTKVAYFSQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGRGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYNSGVQITDIAKEGCSESECGDGSWK
Disordered region (IsUnstruct)
*VLFLCFLFFLFSSATACDRCVHQTKVAYFSQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGRGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEE**QKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYNSGVQITDIAK**************
Disordered Region (DISOPRED)
MVLFLCFLFFLFSSATACDRCVHQTKVAYFSQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGRGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYNSGVQITDIAKEGCSESE*******
Disordered Region (DISEMBL)
MVLFLCFLFFLFSSATACDRCVHQTKVAYFSQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGRGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYNSGVQITDIAKE*************
Disordered Region (DISPRO)
MVLFLCFLFFLFSSATACDRCVHQTKVAYFSQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGRGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYNSGVQITDIAKEGCSESECGDG***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVLFLCFLFFLFSSATACDRCVHQTKVAYFSQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGRGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYNSGVQITDIAKEGCSESECGDGSWK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	261	2.2.26 [Sep-21-2011]
Q9LZT4	265	Expansin-like A1 OS=Arabi	yes	no	0.965	0.950	0.664	2e-91
Q9LZT5	263	Expansin-like A3 OS=Arabi	no	no	0.950	0.942	0.661	3e-88
Q9SVE5	265	Expansin-like A2 OS=Arabi	no	no	0.934	0.920	0.661	5e-88
Q10S70	279	Expansin-like A1 OS=Oryza	yes	no	0.938	0.878	0.530	4e-77
Q7XCL0	275	Expansin-like A2 OS=Oryza	no	no	0.992	0.941	0.522	2e-75
Q8H274	276	Expansin-like A3 OS=Oryza	no	no	0.938	0.887	0.505	2e-70
Q5Z980	313	Expansin-like A4 OS=Oryza	no	no	0.911	0.760	0.370	8e-50
Q850K7	256	Expansin-like B1 OS=Oryza	no	no	0.915	0.933	0.375	3e-44
O23547	250	Expansin-like B1 OS=Arabi	no	no	0.927	0.968	0.371	1e-42
P58738	269	Expansin-B1 OS=Zea mays G	N/A	no	0.770	0.747	0.361	2e-31

>sp|Q9LZT4|EXLA1_ARATH Expansin-like A1 OS=Arabidopsis thaliana GN=EXLA1 PE=2 SV=1

 Score =  335 bits (859), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 170/256 (66%), Positives = 217/256 (84%), Gaps = 4/256 (1%)

Query: 3   LFLCFLFFLFSSAT-ACDRCVHQTKVAYFSQASALSSGACGYGSLALSFNGGHLAAGVPS 61
           LFL  + FLFSS+  ACDRC+H++K AYFS ASALSSGAC YGS+A SF  GH+AA +PS
Sbjct: 5   LFLIVVIFLFSSSVNACDRCLHRSKAAYFSSASALSSGACAYGSMATSFFAGHIAAAIPS 64

Query: 62  LYKDGAGCGACFQMRCKNPTLCSGRGTRVILTDLNHSNQTDFVISSRAFMALSNQ--GKG 119
           +YKDGAGCGACFQ+RCKNP LCS +GT V++TDLN SNQTD V+SSRAF A++    G  
Sbjct: 65  IYKDGAGCGACFQVRCKNPKLCSTKGTIVMITDLNKSNQTDLVLSSRAFRAMAKPIVGAD 124

Query: 120 QDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQV 179
           +D+LK G+VD+EY+RVPC+Y N+N+ VRVEE+S+KPNYL +K+LYQGGQTE+V++D+AQV
Sbjct: 125 KDLLKQGIVDIEYQRVPCDYGNKNMNVRVEEASKKPNYLEIKLLYQGGQTEVVSIDIAQV 184

Query: 180 GSS-NWGYMSRNYGAVWDTSRVPNGALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYNS 238
           GSS NWGYM+R++GAVW T +VP GA+QFRFVVT GYDGK IW+++VLP++W+ G IY++
Sbjct: 185 GSSPNWGYMTRSHGAVWVTDKVPTGAIQFRFVVTGGYDGKMIWSQSVLPSNWEAGKIYDA 244

Query: 239 GVQITDIAKEGCSESE 254
           GVQITDIA+EGC   +
Sbjct: 245 GVQITDIAQEGCDPCD 260

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LZT5|EXLA3_ARATH Expansin-like A3 OS=Arabidopsis thaliana GN=EXLA3 PE=2 SV=1

 Score =  325 bits (832), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 166/251 (66%), Positives = 206/251 (82%), Gaps = 3/251 (1%)

Query: 3   LFLCFLFFLFSSAT-ACDRCVHQTKVAYFSQASALSSGACGYGSLALSFNGGHLAAGVPS 61
           L+L  + FLFSS+  ACDRC+H++K +YFS ASALSSGAC YG +A SF  GH+AA +PS
Sbjct: 5   LYLIVVIFLFSSSVNACDRCLHRSKASYFSSASALSSGACAYGPMATSFFAGHIAAAIPS 64

Query: 62  LYKDGAGCGACFQMRCKNPTLCSGRGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQD 121
           +YKDGAGCGACFQ+RCKNP LC+ +GT V++TDLN SNQTD V+SSRAF A++    G D
Sbjct: 65  IYKDGAGCGACFQVRCKNPKLCNSKGTIVMVTDLNTSNQTDLVLSSRAFRAMAKPVVGVD 124

Query: 122 --ILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQV 179
             +LK G+VDVEY+RVPC Y  +NL VRVEE+S+KPNYLA+K+LYQGGQTE+V +D+A V
Sbjct: 125 KYLLKQGIVDVEYQRVPCNYGKRNLNVRVEEASKKPNYLAIKLLYQGGQTEVVGIDIAPV 184

Query: 180 GSSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYNSG 239
           GSS W YMSR++GAVW T +VP GALQF+F VT GYDGK +W+K VLPA+W  G IY++G
Sbjct: 185 GSSQWSYMSRSHGAVWATDKVPTGALQFKFTVTGGYDGKTVWSKRVLPANWNSGRIYDAG 244

Query: 240 VQITDIAKEGC 250
           VQITDIA+EGC
Sbjct: 245 VQITDIAQEGC 255

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SVE5|EXLA2_ARATH Expansin-like A2 OS=Arabidopsis thaliana GN=EXLA2 PE=2 SV=1

 Score =  324 bits (830), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 164/248 (66%), Positives = 206/248 (83%), Gaps = 4/248 (1%)

Query: 15  ATACDRCVHQTKVAYFSQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQ 74
           A ACDRC+H +K AYFS ASALSSGAC YGS+A  F  GH+AA +PS+YKDG+GCGACFQ
Sbjct: 19  AAACDRCLHSSKAAYFSSASALSSGACAYGSMATGFFAGHIAAALPSIYKDGSGCGACFQ 78

Query: 75  MRCKNPTLCSGRGTRVILTDLNHSNQTDFVISSRAFMALSNQ--GKGQDILKLGVVDVEY 132
           +RCKNPTLCS +GT VI+TDLN +NQTD V+SSRAF A++    G  +D+LK G+VD+EY
Sbjct: 79  VRCKNPTLCSSKGTTVIVTDLNKTNQTDLVLSSRAFRAMAKPVVGADRDLLKQGIVDIEY 138

Query: 133 KRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYG 192
           +RVPC+Y N+ + VRVEESS+ PNYLA+K+LYQGGQTE+VA+ +AQVGSS+W YM+R++G
Sbjct: 139 RRVPCDYGNKKMNVRVEESSKNPNYLAIKLLYQGGQTEVVAIYIAQVGSSHWSYMTRSHG 198

Query: 193 AVWDTSRVPNGALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYNSGVQITDIAKEGCSE 252
           AVW T +VPNGALQFRFVVT+GYDGK +W++ VLPA+W+ G  Y++GVQITDIA+EGC  
Sbjct: 199 AVWVTDKVPNGALQFRFVVTAGYDGKMVWSQRVLPANWEAGKSYDAGVQITDIAQEGC-- 256

Query: 253 SECGDGSW 260
             C D  W
Sbjct: 257 DPCDDHIW 264

Arabidopsis thaliana (taxid: 3702)

>sp|Q10S70|EXLA1_ORYSJ Expansin-like A1 OS=Oryza sativa subsp. japonica GN=EXLA1 PE=2 SV=1

 Score =  287 bits (735), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 132/249 (53%), Positives = 181/249 (72%), Gaps = 4/249 (1%)

Query: 15  ATACDRCVHQTKVAYFSQASALSSGACGYGSLALSFNGG-HLAAGVPSLYKDGAGCGACF 73
           A+ CDRCV +++ AY++ +  L++G+CGYG+ A +FNGG  LAA  P+LY+ G GCGAC+
Sbjct: 33  ASGCDRCVRRSRAAYYTSSLTLTAGSCGYGTAAATFNGGGFLAAAGPALYRGGVGCGACY 92

Query: 74  QMRCKNPTLCSGRGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYK 133
           Q+RCK+  LCS  G RV++TD   +N+T  V+SS AF A++  G    + +L  VDVEYK
Sbjct: 93  QVRCKDKKLCSNAGARVVVTDRARTNRTGLVLSSPAFAAMARPGMAASLTELAAVDVEYK 152

Query: 134 RVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGA 193
           RVPCEY++++L+VRV+E S+ PN L +  LYQGGQT++VA+DVAQVGSS+W +M+R +G 
Sbjct: 153 RVPCEYRHRSLSVRVDERSRGPNELTISFLYQGGQTDIVAVDVAQVGSSSWKFMTREHGP 212

Query: 194 VWDTSRVPNGALQFRFVVTSGYDGKWIWA-KNVLPADWKPGMIYNSGVQITDIAKEGCSE 252
            W  +  P G LQ R VVT GYDGKW+WA + VLP  W+ G +Y++GVQITDIA+EGC  
Sbjct: 213 SWSMANAPPGPLQMRLVVTGGYDGKWVWADREVLPRRWRAGEVYDTGVQITDIAQEGC-- 270

Query: 253 SECGDGSWK 261
             C    WK
Sbjct: 271 FPCDTHEWK 279

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q7XCL0|EXLA2_ORYSJ Expansin-like A2 OS=Oryza sativa subsp. japonica GN=EXLA2 PE=2 SV=1

 Score =  281 bits (720), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 138/264 (52%), Positives = 184/264 (69%), Gaps = 5/264 (1%)

Query: 1   MVLFLCFLFFLFSSATACDRCVHQTKVAYFSQASALSSGACGYGSLALSFNGGHLAAGVP 60
           +VLF   +    S  + CDRCV ++K  +   + AL++G+CGYGSLA SFNGGHLAA  P
Sbjct: 14  VVLFFVVVGMSASMVSGCDRCVRRSKAGFRDSSIALNAGSCGYGSLAASFNGGHLAAASP 73

Query: 61  SLYKDGAGCGACFQMRCKNPTLCSGRGTRVILTDLNHS-NQTDFVISSRAFMALSNQGKG 119
           +L++ G GCGACFQ+RCK+  LCS  G +V++TD   S N+TD V+S+ A+ A++  G  
Sbjct: 74  ALFRGGVGCGACFQVRCKDGKLCSTAGAKVVVTDEARSTNRTDLVLSAAAYAAMARPGMA 133

Query: 120 QDILKLGVVDVEYKRVPCEYK-NQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQ 178
             +     VDVEYKRVPCEY   +NL++RVEE S+ P  L+++ LYQGGQT++VA+DVA 
Sbjct: 134 AQLRTRRAVDVEYKRVPCEYAAGRNLSIRVEEKSRPPRELSIRFLYQGGQTDIVAVDVAT 193

Query: 179 VGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSGYDGKWIWAK-NVLPADWKPGMIYN 237
           VGSSNW +M+R+YG  W T++ P G LQFR VVT GYDGKW+WA   VLP  W  G +Y+
Sbjct: 194 VGSSNWKFMTRDYGPAWSTAQAPAGPLQFRVVVTGGYDGKWVWADGEVLPRRWTAGRVYD 253

Query: 238 SGVQITDIAKEGCSESECGDGSWK 261
           +GVQI D+A+EGC    C    WK
Sbjct: 254 AGVQIADVAQEGC--YPCDTQEWK 275

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q8H274|EXLA3_ORYSJ Expansin-like A3 OS=Oryza sativa subsp. japonica GN=EXLA3 PE=2 SV=1

 Score =  265 bits (678), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 128/253 (50%), Positives = 172/253 (67%), Gaps = 8/253 (3%)

Query: 15  ATACDRCVHQTKVAYFSQASALSSGACGYG-----SLALSFNGGHLAAGVPSLYKDGAGC 69
           A+AC+RCV   K AY    S L  G  G       ++ +  NGG LAAG P  ++ G GC
Sbjct: 26  ASACERCVRNGKAAYSPSLSPLPPGGGGGCGYGAMAMEMELNGGFLAAGGPRQHRGGLGC 85

Query: 70  GACFQMRCKNPTLCSGRGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQDILKLGVVD 129
           G CFQMRC+N  +CS  G RV+LTD + SN TDF++   AF  L+  G    + KL  + 
Sbjct: 86  GRCFQMRCRNAEVCSNAGVRVVLTDFHRSNSTDFLLGGPAFAGLAKPGMAHKLKKLDALS 145

Query: 130 VEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSR 189
           VEY+R+PC+YK++NL++ VEE S++PN L +K LYQGGQT+++A+DVAQVGSS+W +M+R
Sbjct: 146 VEYRRIPCDYKDKNLSILVEEQSKRPNNLVIKFLYQGGQTDILAVDVAQVGSSDWRFMTR 205

Query: 190 NYGAVWDTSRVPNGALQFRFVVTSGYDGKWIWA-KNVLPADWKPGMIYNSGVQITDIAKE 248
            YG VW   R PNG LQFR VVT GYDGKW+WA + VLPA+W+PG +Y++G +I D+A+E
Sbjct: 206 VYGPVWSIDRAPNGPLQFRAVVTGGYDGKWVWADREVLPANWQPGQVYDTGARIADVARE 265

Query: 249 GCSESECGDGSWK 261
            C   +C    WK
Sbjct: 266 SC--LDCATLDWK 276

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q5Z980|EXLA4_ORYSJ Expansin-like A4 OS=Oryza sativa subsp. japonica GN=EXLA4 PE=2 SV=1

 Score =  197 bits (500), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 100/270 (37%), Positives = 164/270 (60%), Gaps = 32/270 (11%)

Query: 13  SSATACDRCVHQTKVAYF----SQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAG 68
           ++A +CD C  +          + A+ L+ GACG+G+  +  N   +AA    L++ G  
Sbjct: 30  AAAHSCDWCTPRHSTVSILPTPTHAAHLTGGACGFGAAPMELN---VAAVTADLFRHGHA 86

Query: 69  CGACFQMRCKNPTLCSGRGTRVILTDLNHSNQTD------------FVISSRAFMALSNQ 116
           CGAC+Q+RC++  LC   G +V++ D+    + +            F I+  AF A++ Q
Sbjct: 87  CGACYQLRCRDRRLCGEDGVKVVVADMAKQPEQEGEMNRTAGGSLQFRITEDAFAAMAKQ 146

Query: 117 G-KGQDILKLGVVDVEYKRVPCEYK-NQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAM 174
           G    ++ +   ++V+++R+PCEY+ ++ LAVRVEE+S+ P +LA++ LYQGGQT++ A+
Sbjct: 147 GVSAHELTRQRTLEVDFRRIPCEYRESRRLAVRVEEASRNPTHLAIRFLYQGGQTDIAAV 206

Query: 175 DVAQVGSS--------NWGYMSRNYGA--VWDTSRVPNGALQFRFVVTSGYDGKWIWAK- 223
           ++AQ  ++        +W YM+R  GA  VW TSR P G L+ R VVT+G  GKW+ +  
Sbjct: 207 EIAQANATPPSSSYYSSWRYMTRRDGAPGVWTTSRAPVGPLRLRVVVTAGSGGKWLRSDG 266

Query: 224 NVLPADWKPGMIYNSGVQITDIAKEGCSES 253
            VLPADW+PG +Y++G+++TD+A   CS S
Sbjct: 267 EVLPADWRPGEVYDTGLRVTDVAVRSCSLS 296

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q850K7|EXLB1_ORYSJ Expansin-like B1 OS=Oryza sativa subsp. japonica GN=EXLB1 PE=2 SV=2

 Score =  178 bits (452), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 93/248 (37%), Positives = 143/248 (57%), Gaps = 9/248 (3%)

Query: 1   MVLFLCFLFFLFSSATACDRCVHQTKVAYF--SQASALSSGACGYGSLALSFNGGHLAAG 58
           + + L  + FL S ATA D     ++ AY+  S      +GAC YG+   + N G ++A 
Sbjct: 9   LPVILSLILFL-SKATA-DANFTVSRAAYYPNSDIKGTENGACEYGAFGATLNNGDVSAS 66

Query: 59  VPSLYKDGAGCGACFQMRCKNPTLCSGRGTRVILTDLNHSNQTDFVISSRAFMALS-NQG 117
             SLY+DG GCGAC+Q+RC NP  CS  G  +++TD   S+ TDF++S  AF  ++ +  
Sbjct: 67  A-SLYRDGVGCGACYQVRCTNPYYCSPNGVTIVITDSGASDGTDFILSQHAFTRMAQSTD 125

Query: 118 KGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVA 177
            G  +L LGVV +EY+RV C Y N+N+  ++ ESS  PNYL  ++ YQ G  +++A+ + 
Sbjct: 126 AGTALLTLGVVGIEYRRVSCTYPNKNIVFKITESSNFPNYLEFEIWYQQGNQDIIAVQLC 185

Query: 178 QVGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSGYD---GKWIWAKNVLPADWKPGM 234
           +  +     +SR +GAVW     P+G L  R + +SG       W+   N++P +W  G 
Sbjct: 186 ETVNLTCQLLSRTHGAVWAAVSPPSGPLSIRMLFSSGAPRGGDTWLVPTNIVPQNWTAGA 245

Query: 235 IYNSGVQI 242
            Y+SGVQ+
Sbjct: 246 TYDSGVQV 253

Oryza sativa subsp. japonica (taxid: 39947)

>sp|O23547|EXLB1_ARATH Expansin-like B1 OS=Arabidopsis thaliana GN=EXLB1 PE=2 SV=2

 Score =  173 bits (439), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 91/245 (37%), Positives = 128/245 (52%), Gaps = 3/245 (1%)

Query: 2   VLFLCFLFFLFSSATAC--DRCVHQTKVAYFS-QASALSSGACGYGSLALSFNGGHLAAG 58
           VL L F+  +      C  D  V+     Y S    A   G CGYG      N G ++  
Sbjct: 6   VLLLLFVQVIVLLPLLCLSDDFVNSRATYYGSPDCKANPRGHCGYGEFGRDINNGEVSGV 65

Query: 59  VPSLYKDGAGCGACFQMRCKNPTLCSGRGTRVILTDLNHSNQTDFVISSRAFMALSNQGK 118
              L+ +G GCGAC+Q+RCK P  CS  G  V+ TD    + TDF++S +A+  ++  G 
Sbjct: 66  SWRLWNNGTGCGACYQVRCKIPPHCSEEGVYVVATDSGEGDGTDFILSPKAYGRMARPGT 125

Query: 119 GQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQ 178
              +   GVV+VEY+R+PC Y   NL  ++ E S  P+YLA+ VLY GG  +++A++V Q
Sbjct: 126 ENQLYSFGVVNVEYQRIPCRYAGYNLVYKIHEKSYNPHYLAILVLYVGGVNDILAVEVWQ 185

Query: 179 VGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYNS 238
                W  M R +GAV D    P G L  RF+V       WI + N +PADW  G  Y+S
Sbjct: 186 EDCKEWRRMRRVFGAVHDLQNPPRGTLTLRFLVYGSAGINWIQSPNAIPADWTAGATYDS 245

Query: 239 GVQIT 243
            + +T
Sbjct: 246 NILLT 250

Arabidopsis thaliana (taxid: 3702)

>sp|P58738|EXPB1_MAIZE Expansin-B1 OS=Zea mays GN=EXPB1 PE=1 SV=2

 Score =  135 bits (341), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 76/210 (36%), Positives = 116/210 (55%), Gaps = 9/210 (4%)

Query: 37  SSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGRGTRVILTDLN 96
           + GACG  ++ L    G  A G   ++KDG GCG+C+++RCK    CSG    V +TD+N
Sbjct: 62  NGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVYITDMN 121

Query: 97  HSN--QTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYK-NQNLAVRVEESSQ 153
           +       F +S +AF +L+  G    I   G++DVE++RV C+Y   Q +   +E+   
Sbjct: 122 YEPIAPYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCN 181

Query: 154 KPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVW--DTSRVPNGALQFRFVV 211
            PNYLAV V Y     ++V M++    S+ W  M  ++GA+W  DT++   G    R   
Sbjct: 182 -PNYLAVLVKYVADDGDIVLMEIQDKLSAEWKPMKLSWGAIWRMDTAKALKGPFSIRLTS 240

Query: 212 TSGYDGKWIWAKNVLPADWKPGMIYNSGVQ 241
            S   GK + AK+V+PA+W+P  +Y S VQ
Sbjct: 241 ES---GKKVIAKDVIPANWRPDAVYTSNVQ 267

May aid fertilization by loosening the cell wall of the stigma and style, thereby facilitating penetration of the pollen tube. Acts selectively on grass cell walls, which are relatively poor in pectins and xyloglucans and rich in glucuronoarabinoxylans and (1-3),(1-4)-beta-D-glucans, when compared with cell walls of other angiosperms, including other monocots.

Zea mays (taxid: 4577)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	261
224105087	259	hypothetical protein POPTRDRAFT_832983 [	0.992	1.0	0.796	1e-124
255587002	259	Beta-expansin 1a precursor, putative [Ri	0.950	0.957	0.812	1e-119
224078466	259	hypothetical protein POPTRDRAFT_713415 [	0.992	1.0	0.762	1e-118
225428199	259	PREDICTED: expansin-like A2 [Vitis vinif	0.992	1.0	0.766	1e-115
147866207	259	hypothetical protein VITISV_025068 [Viti	0.992	1.0	0.762	1e-114
33111959	265	expansin-like protein [Quercus robur]	0.950	0.935	0.78	1e-113
356543973	261	PREDICTED: expansin-like A1-like [Glycin	0.931	0.931	0.779	1e-112
388506836	260	unknown [Medicago truncatula]	0.954	0.957	0.749	1e-111
217071872	260	unknown [Medicago truncatula]	0.942	0.946	0.754	1e-111
388252785	259	expansin-like 1 [Ziziphus jujuba]	0.992	1.0	0.731	1e-110

>gi|224105087|ref|XP_002313682.1| hypothetical protein POPTRDRAFT_832983 [Populus trichocarpa] gi|222850090|gb|EEE87637.1| hypothetical protein POPTRDRAFT_832983 [Populus trichocarpa]

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 208/261 (79%), Positives = 238/261 (91%), Gaps = 2/261 (0%)

Query: 1   MVLFLCFLFFLFSSATACDRCVHQTKVAYFSQASALSSGACGYGSLALSFNGGHLAAGVP 60
           M +FLCFLF + SSAT CDRCVHQ+KVAYFS+ASALS+GACGYGS+A+ FN GHLAA V 
Sbjct: 1   MAVFLCFLFLIISSATGCDRCVHQSKVAYFSKASALSTGACGYGSMAIGFNSGHLAAAVS 60

Query: 61  SLYKDGAGCGACFQMRCKNPTLCSGRGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQ 120
           SLYKDGAGCGACFQ+RCKN  LCS RGT VI+TDLN++NQTDFV+SSRAFMA++N+G GQ
Sbjct: 61  SLYKDGAGCGACFQIRCKNTALCSSRGTTVIVTDLNNNNQTDFVLSSRAFMAMANKGMGQ 120

Query: 121 DILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVG 180
           D+LK G++DVEYKRVPCEYKNQNLAVRVEESS+KPNYLA+K+LYQGGQTE+VAMDVA+VG
Sbjct: 121 DVLKHGILDVEYKRVPCEYKNQNLAVRVEESSKKPNYLAIKLLYQGGQTEVVAMDVAKVG 180

Query: 181 SSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYNSGV 240
           SSNWG+MSRN+GAVWDT RVP GALQFRFVVT+G+DGKWIWA+ VLP DWKPGM Y+SGV
Sbjct: 181 SSNWGFMSRNHGAVWDTDRVPAGALQFRFVVTAGFDGKWIWAQKVLPEDWKPGMTYDSGV 240

Query: 241 QITDIAKEGCSESECGDGSWK 261
           QITDIA+EGC  S CGDG WK
Sbjct: 241 QITDIAQEGC--SPCGDGIWK 259

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255587002|ref|XP_002534094.1| Beta-expansin 1a precursor, putative [Ricinus communis] gi|223525857|gb|EEF28288.1| Beta-expansin 1a precursor, putative [Ricinus communis]

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 203/250 (81%), Positives = 229/250 (91%), Gaps = 2/250 (0%)

Query: 12  FSSATACDRCVHQTKVAYFSQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGA 71
            SSATACDRC HQ+K AYFS+AS LSSGACGYGS A+ FN GHLAAGVP+L+K GAGCGA
Sbjct: 12  ISSATACDRCPHQSKAAYFSKASQLSSGACGYGSSAIGFNSGHLAAGVPTLFKGGAGCGA 71

Query: 72  CFQMRCKNPTLCSGRGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVE 131
           CFQ+RC+N T+CS +GT VILTDLNH+NQTDFV+SSRAFMA++N+G GQDIL+LG+VD+E
Sbjct: 72  CFQIRCRNKTMCSSKGTTVILTDLNHNNQTDFVLSSRAFMAMANKGMGQDILRLGIVDIE 131

Query: 132 YKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNY 191
           YKRVPC YKNQNLAVRVEESSQKPNYLA+KVLYQGGQTE+VAMDVAQVGSSNW YMSRNY
Sbjct: 132 YKRVPCVYKNQNLAVRVEESSQKPNYLAIKVLYQGGQTEIVAMDVAQVGSSNWSYMSRNY 191

Query: 192 GAVWDTSRVPNGALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYNSGVQITDIAKEGCS 251
           GAVWDTSRVP GALQFRFVVT+GYDGKWIWAK+VLPADWKPG++Y+SGVQI+DIA+EGC 
Sbjct: 192 GAVWDTSRVPGGALQFRFVVTAGYDGKWIWAKSVLPADWKPGVVYDSGVQISDIAQEGC- 250

Query: 252 ESECGDGSWK 261
            S C D  WK
Sbjct: 251 -SPCDDEIWK 259

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224078466|ref|XP_002305545.1| hypothetical protein POPTRDRAFT_713415 [Populus trichocarpa] gi|118483011|gb|ABK93417.1| unknown [Populus trichocarpa] gi|222848509|gb|EEE86056.1| hypothetical protein POPTRDRAFT_713415 [Populus trichocarpa]

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 199/261 (76%), Positives = 233/261 (89%), Gaps = 2/261 (0%)

Query: 1   MVLFLCFLFFLFSSATACDRCVHQTKVAYFSQASALSSGACGYGSLALSFNGGHLAAGVP 60
           M +F+CFLF   S ATACDRCVHQ+KVAYFS+ SALSSGACGYGS+A  FN GHLAA V 
Sbjct: 1   MAIFICFLFLAISYATACDRCVHQSKVAYFSRDSALSSGACGYGSMATGFNSGHLAAAVS 60

Query: 61  SLYKDGAGCGACFQMRCKNPTLCSGRGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQ 120
           SLYKDG+GCGACFQ+RCK+ TLCS  GTRVI+TDLN +NQTDFV+SSRAFMA++N+ KG+
Sbjct: 61  SLYKDGSGCGACFQIRCKDTTLCSREGTRVIVTDLNRNNQTDFVLSSRAFMAMANKDKGR 120

Query: 121 DILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVG 180
           +ILK G+V+VEYKRVPCEYKNQNLAVRVEESS+  NYLA+K+LYQGGQTE+VA+D A+VG
Sbjct: 121 NILKQGIVEVEYKRVPCEYKNQNLAVRVEESSKNSNYLAIKLLYQGGQTEVVAIDFAKVG 180

Query: 181 SSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYNSGV 240
           SSNWG+MSRN+GAVWD+ RVP+GALQFRFV+T+G+DGKWIWA+NVLP DWKPGM Y+SGV
Sbjct: 181 SSNWGFMSRNHGAVWDSDRVPSGALQFRFVITAGFDGKWIWARNVLPEDWKPGMTYDSGV 240

Query: 241 QITDIAKEGCSESECGDGSWK 261
           QITDIA+EGC  S C DG WK
Sbjct: 241 QITDIAQEGC--SPCDDGIWK 259

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225428199|ref|XP_002281851.1| PREDICTED: expansin-like A2 [Vitis vinifera] gi|297744518|emb|CBI37780.3| unnamed protein product [Vitis vinifera]

 Score =  419 bits (1078), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 200/261 (76%), Positives = 224/261 (85%), Gaps = 2/261 (0%)

Query: 1   MVLFLCFLFFLFSSATACDRCVHQTKVAYFSQASALSSGACGYGSLALSFNGGHLAAGVP 60
           M +FLCFLFFL SSATACDRCVH TKVAYFS+ASALSSGACGYGSLAL F GGHLAAGVP
Sbjct: 1   MAIFLCFLFFLISSATACDRCVHHTKVAYFSKASALSSGACGYGSLALGFYGGHLAAGVP 60

Query: 61  SLYKDGAGCGACFQMRCKNPTLCSGRGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQ 120
           SL+KDGAGCGACFQ+RCKN TLCS  GT VILTDLN +NQTDFV+SSRAF A++N+G GQ
Sbjct: 61  SLFKDGAGCGACFQIRCKNTTLCSRAGTTVILTDLNRNNQTDFVLSSRAFTAMANKGMGQ 120

Query: 121 DILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVG 180
            ILKLG+VDVEYKRV C Y  QNLA+RVEE SQKP+YLA+KVLYQGGQTE+V MDVAQV 
Sbjct: 121 QILKLGLVDVEYKRVLCNYNKQNLAIRVEEMSQKPHYLAIKVLYQGGQTEIVGMDVAQVD 180

Query: 181 SSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYNSGV 240
           SS W YM+RNYGA+WDTS VP+G LQ RFVVT GYDGKW+WAK VLPADWK G  Y++GV
Sbjct: 181 SSRWTYMTRNYGAIWDTSNVPSGPLQLRFVVTGGYDGKWVWAKKVLPADWKVGETYDAGV 240

Query: 241 QITDIAKEGCSESECGDGSWK 261
           QI+DIA+E C    C + +WK
Sbjct: 241 QISDIAQEPC--YPCDNENWK 259

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147866207|emb|CAN79420.1| hypothetical protein VITISV_025068 [Vitis vinifera]

 Score =  416 bits (1068), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 199/261 (76%), Positives = 223/261 (85%), Gaps = 2/261 (0%)

Query: 1   MVLFLCFLFFLFSSATACDRCVHQTKVAYFSQASALSSGACGYGSLALSFNGGHLAAGVP 60
           M +FLCFLFFL SSATACDRCVH TKVAYFS+ASALSSGACGYGSLAL F GGHLAAGV 
Sbjct: 1   MAIFLCFLFFLISSATACDRCVHHTKVAYFSKASALSSGACGYGSLALGFYGGHLAAGVX 60

Query: 61  SLYKDGAGCGACFQMRCKNPTLCSGRGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQ 120
           SL+KDGAGCGACFQ+RCKN TLCS  GT VILTDLN +NQTDFV+SSRAF A++N+G GQ
Sbjct: 61  SLFKDGAGCGACFQIRCKNTTLCSRAGTTVILTDLNRNNQTDFVLSSRAFTAMANKGMGQ 120

Query: 121 DILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVG 180
            ILKLG+VDVEYKRV C Y  QNLA+RVEE SQKP+YLA+KVLYQGGQTE+V MDVAQV 
Sbjct: 121 QILKLGLVDVEYKRVLCNYNKQNLAIRVEEMSQKPHYLAIKVLYQGGQTEIVGMDVAQVD 180

Query: 181 SSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYNSGV 240
           SS W YM+RNYGA+WDTS VP+G LQ RFVVT GYDGKW+WAK VLPADWK G  Y++GV
Sbjct: 181 SSRWTYMTRNYGAIWDTSNVPSGPLQLRFVVTGGYDGKWVWAKKVLPADWKVGETYDAGV 240

Query: 241 QITDIAKEGCSESECGDGSWK 261
           QI+DIA+E C    C + +WK
Sbjct: 241 QISDIAQEPC--YPCDNENWK 259

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|33111959|emb|CAE12163.1| expansin-like protein [Quercus robur]

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 195/250 (78%), Positives = 223/250 (89%), Gaps = 2/250 (0%)

Query: 12  FSSATACDRCVHQTKVAYFSQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGA 71
            S++TACDRCVH+ KVAYFS+ASALSSGACGYGSLAL FN GHLAAGV SLYKDGAGCGA
Sbjct: 18  ISTSTACDRCVHKAKVAYFSKASALSSGACGYGSLALGFNSGHLAAGVASLYKDGAGCGA 77

Query: 72  CFQMRCKNPTLCSGRGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVE 131
           CFQ+RCKN + C+  GT V +TDLN +NQTDFV+SSRAFMA++ +G GQDILKLG+VDVE
Sbjct: 78  CFQVRCKNTSHCTKEGTIVTVTDLNRNNQTDFVVSSRAFMAMAQKGMGQDILKLGIVDVE 137

Query: 132 YKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNY 191
           YKRVPC+YKNQNLAVRVEE SQKPNYLAVK LYQG QTE+V +DVAQVGSSNWG+MS NY
Sbjct: 138 YKRVPCQYKNQNLAVRVEEPSQKPNYLAVKFLYQGSQTEIVGVDVAQVGSSNWGFMSHNY 197

Query: 192 GAVWDTSRVPNGALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYNSGVQITDIAKEGCS 251
           GAVWDTSRVP+GALQFR V+T+GYDGK+IWA++VLPADWK G+IY+SGVQ TDIA+EGC 
Sbjct: 198 GAVWDTSRVPSGALQFRIVITAGYDGKYIWAQHVLPADWKSGVIYDSGVQFTDIAQEGC- 256

Query: 252 ESECGDGSWK 261
            S C D +WK
Sbjct: 257 -SPCDDEAWK 265

Source: Quercus robur

Species: Quercus robur

Genus: Quercus

Family: Fagaceae

Order: Fagales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356543973|ref|XP_003540432.1| PREDICTED: expansin-like A1-like [Glycine max]

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 191/245 (77%), Positives = 219/245 (89%), Gaps = 2/245 (0%)

Query: 16  TACDRCVHQTKVAYFSQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQM 75
           TACDRC+HQ+K +YFS+ASALSSGACGYGSLAL  +GGHLAAGV SL+KDGA CGACFQ+
Sbjct: 18  TACDRCLHQSKASYFSKASALSSGACGYGSLALDISGGHLAAGVASLFKDGAVCGACFQI 77

Query: 76  RCKNPTLCSGRGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRV 135
           RCKNPTLCS  GTRV+LTDLNH+NQTDFV+SSRAF  ++ +G G+ ILKLG+ D+EYKRV
Sbjct: 78  RCKNPTLCSKEGTRVVLTDLNHNNQTDFVLSSRAFAGMAQKGMGKQILKLGIADIEYKRV 137

Query: 136 PCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVW 195
           PCEYK QNLAVRVEESS+KP YLA+K LYQGGQTE+VA+DVAQVGSSNW +MSR+ GAVW
Sbjct: 138 PCEYKKQNLAVRVEESSKKPEYLAIKFLYQGGQTEIVAVDVAQVGSSNWSFMSRSDGAVW 197

Query: 196 DTSRVPNGALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYNSGVQITDIAKEGCSESEC 255
           DTSRVP GALQFR VVT+GYDGKWIWAK VLPADWK G+IY+SG+QITDIA+EGC  S C
Sbjct: 198 DTSRVPQGALQFRLVVTAGYDGKWIWAKKVLPADWKNGLIYDSGLQITDIAQEGC--SPC 255

Query: 256 GDGSW 260
            DG+W
Sbjct: 256 DDGTW 260

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388506836|gb|AFK41484.1| unknown [Medicago truncatula]

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 188/251 (74%), Positives = 222/251 (88%), Gaps = 2/251 (0%)

Query: 10  FLFSSATACDRCVHQTKVAYFSQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGC 69
            L SSATACDRC+HQ+K +YFS+ASALSSGACGYGSLAL F+GGHLAAGV SL+ +GAGC
Sbjct: 11  ILASSATACDRCLHQSKASYFSKASALSSGACGYGSLALDFSGGHLAAGVSSLFYNGAGC 70

Query: 70  GACFQMRCKNPTLCSGRGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQDILKLGVVD 129
           GACFQ+RCKN  +C+  GT+V+LTDLNH+NQTDFV+SSRAF A++ +G  Q ILKLG+VD
Sbjct: 71  GACFQVRCKNQAICTKEGTKVVLTDLNHNNQTDFVLSSRAFTAMAQKGMSQQILKLGIVD 130

Query: 130 VEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSR 189
           +EYKRVPCEYK QNLAVRVEESS+KP+YLA+K LYQGGQTE+V +DVAQVGSSNW ++SR
Sbjct: 131 IEYKRVPCEYKKQNLAVRVEESSKKPDYLAIKFLYQGGQTEIVGVDVAQVGSSNWSFLSR 190

Query: 190 NYGAVWDTSRVPNGALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYNSGVQITDIAKEG 249
           N+GAVWDTSRVP GALQFR VVTSGYDGKW+WAK VLPADWK G+IY+S +QIT+IA+EG
Sbjct: 191 NHGAVWDTSRVPQGALQFRIVVTSGYDGKWLWAKKVLPADWKNGVIYDSDIQITEIAQEG 250

Query: 250 CSESECGDGSW 260
           C  S C D +W
Sbjct: 251 C--SPCNDETW 259

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217071872|gb|ACJ84296.1| unknown [Medicago truncatula]

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 187/248 (75%), Positives = 221/248 (89%), Gaps = 2/248 (0%)

Query: 13  SSATACDRCVHQTKVAYFSQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGAC 72
           SSATACDRC+HQ+K +YFS+ASALSSGACGYGSLAL F+GGHLAAGV SL+ +GAGCGAC
Sbjct: 14  SSATACDRCLHQSKASYFSKASALSSGACGYGSLALDFSGGHLAAGVSSLFYNGAGCGAC 73

Query: 73  FQMRCKNPTLCSGRGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEY 132
           FQ+RCKN  +C+  GT+V+LTDLNH+NQTDFV+SSRAF A++ +G  Q ILKLG+VD+EY
Sbjct: 74  FQVRCKNQAICTKEGTKVVLTDLNHNNQTDFVLSSRAFTAMAQKGMSQQILKLGIVDIEY 133

Query: 133 KRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYG 192
           KRVPCEYK QNLAVRVEESS+KP+YLA+K LYQGGQTE+V +DVAQVGSSNW ++SRN+G
Sbjct: 134 KRVPCEYKKQNLAVRVEESSKKPDYLAIKFLYQGGQTEIVGVDVAQVGSSNWSFLSRNHG 193

Query: 193 AVWDTSRVPNGALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYNSGVQITDIAKEGCSE 252
           AVWDTSRVP GALQFR VVTSGYDGKW+WAK VLPADWK G+IY+S +QIT+IA+EGC  
Sbjct: 194 AVWDTSRVPQGALQFRIVVTSGYDGKWLWAKKVLPADWKNGVIYDSDIQITEIAQEGC-- 251

Query: 253 SECGDGSW 260
           S C D +W
Sbjct: 252 SPCNDETW 259

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388252785|gb|AFK24456.1| expansin-like 1 [Ziziphus jujuba]

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 191/261 (73%), Positives = 220/261 (84%), Gaps = 2/261 (0%)

Query: 1   MVLFLCFLFFLFSSATACDRCVHQTKVAYFSQASALSSGACGYGSLALSFNGGHLAAGVP 60
           M L    LFFL SS TACDRCVHQTK AYFS+ASALSSGACGYGSLAL F+G H+AAGVP
Sbjct: 1   MALLFSILFFLISSVTACDRCVHQTKTAYFSKASALSSGACGYGSLALGFSGEHVAAGVP 60

Query: 61  SLYKDGAGCGACFQMRCKNPTLCSGRGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQ 120
           +L+KDGAGCGACFQ+RCK+  LCS  GTRVILTDLN  NQTDFV+SSRAF A++ +G  Q
Sbjct: 61  TLFKDGAGCGACFQIRCKDTALCSKEGTRVILTDLNQHNQTDFVLSSRAFTAMAQKGLDQ 120

Query: 121 DILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVG 180
           DILK G+VDV  +      + +NL+VRVEESSQKPNYL++K+LYQGGQTE+V +DVA+VG
Sbjct: 121 DILKRGIVDVNTRGFLVNTRKKNLSVRVEESSQKPNYLSIKLLYQGGQTEVVGIDVAEVG 180

Query: 181 SSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYNSGV 240
           SSNW +MSRN+GAVWDTSRVP GALQFRF+VTSGYDGKWIWAK+VLPA WK G+IY+SGV
Sbjct: 181 SSNWSFMSRNHGAVWDTSRVPAGALQFRFIVTSGYDGKWIWAKSVLPAGWKVGVIYDSGV 240

Query: 241 QITDIAKEGCSESECGDGSWK 261
           QI DIA+EGC  S C  GSWK
Sbjct: 241 QINDIAQEGC--SPCDTGSWK 259

Source: Ziziphus jujuba

Species: Ziziphus jujuba

Genus: Ziziphus

Family: Rhamnaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	261
TAIR|locus:2121803	265	EXLA2 "expansin-like A2" [Arab	0.942	0.928	0.664	3.4e-93
TAIR|locus:2077177	265	EXLA1 "expansin-like A1" [Arab	0.942	0.928	0.661	1.1e-92
TAIR|locus:2077167	263	EXLA3 "expansin-like A3" [Arab	0.927	0.920	0.662	3.1e-90
TAIR|locus:2130444	250	EXLB1 "expansin-like B1" [Arab	0.839	0.876	0.371	8.4e-42
TAIR|locus:2018521	273	EXPB2 "expansin B2" [Arabidops	0.862	0.824	0.345	1e-29
TAIR|locus:2051338	271	EXPB1 "expansin B1" [Arabidops	0.862	0.830	0.309	3.2e-26
TAIR|locus:2123643	264	EXPB3 "expansin B3" [Arabidops	0.777	0.768	0.314	1.1e-25
TAIR|locus:2055594	259	EXPB4 "expansin B4" [Arabidops	0.754	0.760	0.345	2.6e-24
TAIR|locus:4515102723	223	EXPB6 "AT1G65681" [Arabidopsis	0.770	0.901	0.330	4.2e-24
TAIR|locus:2034680	262	EXPA7 "expansin A7" [Arabidops	0.708	0.706	0.359	6.3e-21

TAIR|locus:2121803 EXLA2 "expansin-like A2" [Arabidopsis thaliana (taxid:3702)]

 Score = 928 (331.7 bits), Expect = 3.4e-93, P = 3.4e-93
 Identities = 166/250 (66%), Positives = 208/250 (83%)

Query:    13 SSATACDRCVHQTKVAYFSQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGAC 72
             SSA ACDRC+H +K AYFS ASALSSGAC YGS+A  F  GH+AA +PS+YKDG+GCGAC
Sbjct:    17 SSAAACDRCLHSSKAAYFSSASALSSGACAYGSMATGFFAGHIAAALPSIYKDGSGCGAC 76

Query:    73 FQMRCKNPTLCSGRGTRVILTDLNHSNQTDFVISSRAFMALSNQ--GKGQDILKLGVVDV 130
             FQ+RCKNPTLCS +GT VI+TDLN +NQTD V+SSRAF A++    G  +D+LK G+VD+
Sbjct:    77 FQVRCKNPTLCSSKGTTVIVTDLNKTNQTDLVLSSRAFRAMAKPVVGADRDLLKQGIVDI 136

Query:   131 EYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRN 190
             EY+RVPC+Y N+ + VRVEESS+ PNYLA+K+LYQGGQTE+VA+ +AQVGSS+W YM+R+
Sbjct:   137 EYRRVPCDYGNKKMNVRVEESSKNPNYLAIKLLYQGGQTEVVAIYIAQVGSSHWSYMTRS 196

Query:   191 YGAVWDTSRVPNGALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYNSGVQITDIAKEGC 250
             +GAVW T +VPNGALQFRFVVT+GYDGK +W++ VLPA+W+ G  Y++GVQITDIA+EGC
Sbjct:   197 HGAVWVTDKVPNGALQFRFVVTAGYDGKMVWSQRVLPANWEAGKSYDAGVQITDIAQEGC 256

Query:   251 SESECGDGSW 260
                 C D  W
Sbjct:   257 DP--CDDHIW 264

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=ISS

GO:0019953 "sexual reproduction" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=NAS

GO:0009828 "plant-type cell wall loosening" evidence=NAS

TAIR|locus:2077177 EXLA1 "expansin-like A1" [Arabidopsis thaliana (taxid:3702)]

 Score = 923 (330.0 bits), Expect = 1.1e-92, P = 1.1e-92
 Identities = 166/251 (66%), Positives = 210/251 (83%)

Query:    13 SSATACDRCVHQTKVAYFSQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGAC 72
             SS  ACDRC+H++K AYFS ASALSSGAC YGS+A SF  GH+AA +PS+YKDGAGCGAC
Sbjct:    16 SSVNACDRCLHRSKAAYFSSASALSSGACAYGSMATSFFAGHIAAAIPSIYKDGAGCGAC 75

Query:    73 FQMRCKNPTLCSGRGTRVILTDLNHSNQTDFVISSRAFMALSNQ--GKGQDILKLGVVDV 130
             FQ+RCKNP LCS +GT V++TDLN SNQTD V+SSRAF A++    G  +D+LK G+VD+
Sbjct:    76 FQVRCKNPKLCSTKGTIVMITDLNKSNQTDLVLSSRAFRAMAKPIVGADKDLLKQGIVDI 135

Query:   131 EYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSS-NWGYMSR 189
             EY+RVPC+Y N+N+ VRVEE+S+KPNYL +K+LYQGGQTE+V++D+AQVGSS NWGYM+R
Sbjct:   136 EYQRVPCDYGNKNMNVRVEEASKKPNYLEIKLLYQGGQTEVVSIDIAQVGSSPNWGYMTR 195

Query:   190 NYGAVWDTSRVPNGALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYNSGVQITDIAKEG 249
             ++GAVW T +VP GA+QFRFVVT GYDGK IW+++VLP++W+ G IY++GVQITDIA+EG
Sbjct:   196 SHGAVWVTDKVPTGAIQFRFVVTGGYDGKMIWSQSVLPSNWEAGKIYDAGVQITDIAQEG 255

Query:   250 CSESECGDGSW 260
             C    C    W
Sbjct:   256 CDP--CDAHIW 264

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009826 "unidimensional cell growth" evidence=NAS

GO:0009828 "plant-type cell wall loosening" evidence=NAS

GO:0005618 "cell wall" evidence=IDA

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

TAIR|locus:2077167 EXLA3 "expansin-like A3" [Arabidopsis thaliana (taxid:3702)]

 Score = 900 (321.9 bits), Expect = 3.1e-90, P = 3.1e-90
 Identities = 163/246 (66%), Positives = 200/246 (81%)

Query:    13 SSATACDRCVHQTKVAYFSQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGAC 72
             SS  ACDRC+H++K +YFS ASALSSGAC YG +A SF  GH+AA +PS+YKDGAGCGAC
Sbjct:    16 SSVNACDRCLHRSKASYFSSASALSSGACAYGPMATSFFAGHIAAAIPSIYKDGAGCGAC 75

Query:    73 FQMRCKNPTLCSGRGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQD--ILKLGVVDV 130
             FQ+RCKNP LC+ +GT V++TDLN SNQTD V+SSRAF A++    G D  +LK G+VDV
Sbjct:    76 FQVRCKNPKLCNSKGTIVMVTDLNTSNQTDLVLSSRAFRAMAKPVVGVDKYLLKQGIVDV 135

Query:   131 EYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRN 190
             EY+RVPC Y  +NL VRVEE+S+KPNYLA+K+LYQGGQTE+V +D+A VGSS W YMSR+
Sbjct:   136 EYQRVPCNYGKRNLNVRVEEASKKPNYLAIKLLYQGGQTEVVGIDIAPVGSSQWSYMSRS 195

Query:   191 YGAVWDTSRVPNGALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYNSGVQITDIAKEGC 250
             +GAVW T +VP GALQF+F VT GYDGK +W+K VLPA+W  G IY++GVQITDIA+EGC
Sbjct:   196 HGAVWATDKVPTGALQFKFTVTGGYDGKTVWSKRVLPANWNSGRIYDAGVQITDIAQEGC 255

Query:   251 SESECG 256
                 CG
Sbjct:   256 DT--CG 259

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=ISS

GO:0009826 "unidimensional cell growth" evidence=NAS

GO:0009828 "plant-type cell wall loosening" evidence=NAS

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2130444 EXLB1 "expansin-like B1" [Arabidopsis thaliana (taxid:3702)]

 Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
 Identities = 82/221 (37%), Positives = 121/221 (54%)

Query:    25 TKVAYFSQASALSS--GACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTL 82
             ++  Y+      ++  G CGYG      N G ++     L+ +G GCGAC+Q+RCK P  
Sbjct:    30 SRATYYGSPDCKANPRGHCGYGEFGRDINNGEVSGVSWRLWNNGTGCGACYQVRCKIPPH 89

Query:    83 CSGRGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQ 142
             CS  G  V+ TD    + TDF++S +A+  ++  G    +   GVV+VEY+R+PC Y   
Sbjct:    90 CSEEGVYVVATDSGEGDGTDFILSPKAYGRMARPGTENQLYSFGVVNVEYQRIPCRYAGY 149

Query:   143 NLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPN 202
             NL  ++ E S  P+YLA+ VLY GG  +++A++V Q     W  M R +GAV D    P 
Sbjct:   150 NLVYKIHEKSYNPHYLAILVLYVGGVNDILAVEVWQEDCKEWRRMRRVFGAVHDLQNPPR 209

Query:   203 GALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYNSGVQIT 243
             G L  RF+V       WI + N +PADW  G  Y+S + +T
Sbjct:   210 GTLTLRFLVYGSAGINWIQSPNAIPADWTAGATYDSNILLT 250

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009826 "unidimensional cell growth" evidence=ISS

GO:0009828 "plant-type cell wall loosening" evidence=ISS

GO:0019953 "sexual reproduction" evidence=IEA

TAIR|locus:2018521 EXPB2 "expansin B2" [Arabidopsis thaliana (taxid:3702)]

 Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
 Identities = 82/237 (34%), Positives = 124/237 (52%)

Query:    13 SSATACDRCVHQTKVAYFSQASALSS--GACGYGS-LALSFNGGHLAAGVPSLYKDGAGC 69
             S+AT  D         ++   +   S  GACGYG+ +A       ++AG PSL+K G GC
Sbjct:    38 SAATTSDSDWSIAGSTWYGNPTGYGSDGGACGYGNAVAQPPFSKMVSAGGPSLFKSGKGC 97

Query:    70 GACFQMRCKNPTLCSGRGTRVILTDLNHS---NQTDFVISSRAFMALSNQGKGQDILKLG 126
             GAC+Q++C + + CS     V++TD           F +S  AF A++  G+   +  +G
Sbjct:    98 GACYQVKCTSKSACSKNPVTVVITDECPGCVKESVHFDLSGTAFGAMAISGQDSQLRNVG 157

Query:   127 VVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQ-VGSSNWG 185
              + + YK+V C Y  + +  +V++ S   N  AV V Y  G  E+  +++ Q + S  W 
Sbjct:   158 ELQILYKKVECNYIGKTVTFQVDKGSNA-NSFAVLVAYVNGDGEIGRIELKQALDSDKWL 216

Query:   186 YMSRNYGAVW--DTSRVPNGALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYNSGV 240
              MS+++GAVW  D S      L  R  VTS   GK + A NV+PA+W+PG IY S V
Sbjct:   217 SMSQSWGAVWKLDVSSPLRAPLSLR--VTSLESGKTVVASNVIPANWQPGAIYKSNV 271

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0019953 "sexual reproduction" evidence=IEA

TAIR|locus:2051338 EXPB1 "expansin B1" [Arabidopsis thaliana (taxid:3702)]

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 74/239 (30%), Positives = 118/239 (49%)

Query:    17 ACDRCVHQTKVAYFS-QASALSSGACGYGSLA--LSFNGGHLAAGVPSLYKDGAGCGACF 73
             A  R +  T   Y S +    S GACGYGSL     F    + A  P L+K G GCGAC+
Sbjct:    36 AATRWLPATATWYGSAEGDGSSGGACGYGSLVDVKPFKA-RVGAVSPILFKGGEGCGACY 94

Query:    74 QMRCKNPTLCSGRGTRVILTDLNHSN------QTDFVISSRAFMALSNQGKGQDILKLGV 127
             ++RC + T+CS R   +I TD + S        T F +S  AF  ++  G    I   G+
Sbjct:    95 KVRCLDKTICSKRAVTIIATDQSPSGPSAKAKHTHFDLSGAAFGHMAIPGHNGVIRNRGL 154

Query:   128 VDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYM 187
             +++ Y+R  C+Y+ +N+A  V   S    +L++ + Y+ G+ ++ +M + Q GS  W  M
Sbjct:   155 LNILYRRTACKYRGKNIAFHVNAGSTD-YWLSLLIEYEDGEGDIGSMHIRQAGSKEWISM 213

Query:   188 SRNYGAVWDTSRVP-NGALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYNSGVQITDI 245
                +GA W     P  G    +    S  + K + A +V+P++W P   Y S +  + +
Sbjct:   214 KHIWGANWCIVEGPLKGPFSVKLTTLS--NNKTLSATDVIPSNWVPKATYTSRLNFSPV 270

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=ISS

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0019953 "sexual reproduction" evidence=IEA

TAIR|locus:2123643 EXPB3 "expansin B3" [Arabidopsis thaliana (taxid:3702)]

 Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
 Identities = 67/213 (31%), Positives = 110/213 (51%)

Query:    39 GACGYGSLALSFNGGHLAAGV--PSLYKDGAGCGACFQMRCKNPTLCSGRGTRVILTDLN 96
             GACGYG+L +     H   G   P L+K+G GCGAC+++RC + ++CS R   VI+TD  
Sbjct:    55 GACGYGTL-VDVKPLHARVGAVNPILFKNGEGCGACYKVRCLDKSICSRRAVTVIITDEC 113

Query:    97 ---HSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQ 153
                    T F +S   F  L+  G+   +   G++ V Y+R  C+Y+ +N+A  V E S 
Sbjct:   114 PGCSKTSTHFDLSGAVFGRLAIAGESGPLRNRGLIPVIYRRTACKYRGKNIAFHVNEGST 173

Query:   154 KPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVP-NGALQFRFVVT 212
                +L++ V ++ G+ ++ +M + Q G+  W  M   +GA W     P  G    +    
Sbjct:   174 D-FWLSLLVEFEDGEGDIGSMHIRQAGAREWLEMKHVWGANWCIIGGPLKGPFSIKLTTL 232

Query:   213 SGYDGKWIWAKNVLPADWKPGMIYNSGVQITDI 245
             S   GK + A +V+P +W P   Y+S +  + +
Sbjct:   233 SA--GKTLSATDVVPRNWAPKATYSSRLNFSPV 263

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=ISS

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0019953 "sexual reproduction" evidence=IEA

GO:0006949 "syncytium formation" evidence=IEP

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2055594 EXPB4 "expansin B4" [Arabidopsis thaliana (taxid:3702)]

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 73/211 (34%), Positives = 108/211 (51%)

Query:    37 SSGACGYGS-LALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGRGTRVILTDL 95
             + GACGYGS +A       ++AG PSL+ +G GCG C+Q+ C     CSG    V +TD 
Sbjct:    50 TGGACGYGSAVANPPLYAMVSAGGPSLFNNGKGCGTCYQVVCIGHPACSGSPITVTITDE 109

Query:    96 NH-----SNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEE 150
                    S      +S +A  AL+  G+   +   GV+ V YKR  C Y+  N+  R++ 
Sbjct:   110 CPGGPCASEPVHIDLSGKAMGALAKPGQADQLRSAGVIRVNYKRAACLYRGTNIVFRMDA 169

Query:   151 SSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNG-ALQ--F 207
              +  P Y++  V Y+ G  ++  +++   G S +  M     AVW   +V +G AL+  F
Sbjct:   170 GAN-PYYISFVVEYENGDGDLSNVEIQPAGGS-FISMQEMRSAVW---KVNSGSALRGPF 224

Query:   208 RFVVTSGYDGKWIWAKNVLPADWKPGMIYNS 238
                +TSG   K I A NV+PA+WKP   Y S
Sbjct:   225 NIRLTSGESHKVIVAYNVIPANWKPDESYRS 255

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0019953 "sexual reproduction" evidence=IEA

TAIR|locus:4515102723 EXPB6 "AT1G65681" [Arabidopsis thaliana (taxid:3702)]

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 69/209 (33%), Positives = 105/209 (50%)

Query:    37 SSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGRGTRVILTDLN 96
             + GACG+ ++A     G ++AG PS++ +G GCG CFQ+ C     CS R   V +TD  
Sbjct:    15 TGGACGF-AVANPPLYGMVSAGGPSVFNNGIGCGTCFQILCNGHPACSRRPITVTITDEC 73

Query:    97 H-----SNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEES 151
                   S    F +S +A  AL+  G+G  +   GV+ V Y+RV C Y+  N+A R++  
Sbjct:    74 PGGPCASEPAHFDLSGKAMGALARPGQGDRLRSAGVLRVYYRRVECLYRRTNIAFRMDPG 133

Query:   152 SQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVV 211
             +  P Y++  V Y+ G  ++  +++ Q     +  M     AVW  S        F   +
Sbjct:   134 AN-PYYISFVVEYENGDGDLAYIEI-QPADGEFIPMQEMRSAVWKISSGSPLTGPFNIRL 191

Query:   212 TSGYDGKWIWAKNVLPADWKPGMIYNSGV 240
             TS    K + A NV+PA+WKP   Y S V
Sbjct:   192 TSAESHKVVLAYNVIPANWKPNETYRSVV 220

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=IEA

GO:0019953 "sexual reproduction" evidence=IEA

TAIR|locus:2034680 EXPA7 "expansin A7" [Arabidopsis thaliana (taxid:3702)]

 Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
 Identities = 78/217 (35%), Positives = 114/217 (52%)

Query:    39 GACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRC-KNPTLCSGRGTRVILTDL-- 95
             GACGYG+L  S  G   AA   +L+ DG GCG CFQ+ C K+P   SG+ T V  T+L  
Sbjct:    56 GACGYGNLFNSGYGLSTAALSTTLFNDGYGCGQCFQITCSKSPHCYSGKSTVVTATNLCP 115

Query:    96 ----NHSN--------QTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQN 143
                   SN        +T F ++  AFM L+         + G++ V Y+RVPC+ ++  
Sbjct:   116 PNWYQDSNAGGWCNPPRTHFDMAKPAFMKLA-------YWRAGIIPVAYRRVPCQ-RSGG 167

Query:   144 LAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGS-SNWGYMSRNYGAVWDT-SRVP 201
             +  + + +S    +L + V+  GG  ++ +M V   GS +NW  MS N+GA +   S + 
Sbjct:   168 MRFQFQGNSY---WLLIFVMNVGGAGDIKSMAVK--GSRTNWISMSHNWGASYQAFSSLY 222

Query:   202 NGALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYNS 238
               +L FR  VTS   G+ I+A NV PA+W  G  Y S
Sbjct:   223 GQSLSFR--VTSYTTGETIYAWNVAPANWSGGKTYKS 257

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0048767 "root hair elongation" evidence=RCA;IMP

GO:0010054 "trichoblast differentiation" evidence=RCA

GO:0048446 "petal morphogenesis" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LZT4	EXLA1_ARATH	No assigned EC number	0.6640	0.9655	0.9509	yes	no
Q10S70	EXLA1_ORYSJ	No assigned EC number	0.5301	0.9386	0.8781	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: PtrEXLA2 hypothetical protein (260 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	261
PLN03023	247	PLN03023, PLN03023, Expansin-like B1; Provisional	6e-71
pfam01357	82	pfam01357, Pollen_allerg_1, Pollen allergen	5e-28
PLN00050	247	PLN00050, PLN00050, expansin A; Provisional	2e-18
pfam03330	77	pfam03330, DPBB_1, Rare lipoprotein A (RlpA)-like	9e-15
PLN00193	256	PLN00193, PLN00193, expansin-A; Provisional	2e-14
smart00837	87	smart00837, DPBB_1, Rare lipoprotein A (RlpA)-like	0.001

>gnl|CDD|215542 PLN03023, PLN03023, Expansin-like B1; Provisional

 Score =  217 bits (555), Expect = 6e-71
 Identities = 97/243 (39%), Positives = 144/243 (59%), Gaps = 5/243 (2%)

Query: 3   LFLCFLFFLFSSATACDRCVHQTKVAYFSQASALS--SGACGYGSLALSFNGGHLAAGVP 60
            FLC +  L           + ++  Y+     L   +GACG+G    + NGG++A GV 
Sbjct: 8   CFLCVIVLL-PLLCKSQDFTY-SRATYYGSPDCLGTPTGACGFGEYGRTVNGGNVA-GVS 64

Query: 61  SLYKDGAGCGACFQMRCKNPTLCSGRGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQ 120
            LY++G GCGAC+Q+RCK P LCS  G  V++TD    ++TDF++S RA+  L+      
Sbjct: 65  RLYRNGTGCGACYQVRCKAPNLCSDDGVNVVVTDYGEGDKTDFILSPRAYARLARPNMAA 124

Query: 121 DILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVG 180
           ++   GVVDVEY+R+PC Y   NL  +V E S+ P+YLA+ +LYQ GQ +++A+++ Q  
Sbjct: 125 ELFAYGVVDVEYRRIPCRYAGYNLFFKVHEHSRFPDYLAIVMLYQAGQNDILAVEIWQED 184

Query: 181 SSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYNSGV 240
              W  M + YGAVWD    P G +  RF V+      W+ AKNV+P+DWK G+ Y+S +
Sbjct: 185 CKEWRGMRKAYGAVWDMPNPPKGPITLRFQVSGSAGQTWVQAKNVIPSDWKAGVAYDSNI 244

Query: 241 QIT 243
           Q+ 
Sbjct: 245 QLD 247

Length = 247

>gnl|CDD|216453 pfam01357, Pollen_allerg_1, Pollen allergen

 Score =  102 bits (256), Expect = 5e-28
 Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 4/85 (4%)

Query: 144 LAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPN- 202
           +   V   S  P +LAV V   GG  ++VA+++ + GS  W  MSRN+GA W +  V   
Sbjct: 1   VRFTVNGGS-NPYFLAVLVENVGGDGDIVAVEIKEAGSGEWIPMSRNWGANWQSDSVLLG 59

Query: 203 GALQFRFVVTSGYDGKWIWAKNVLP 227
           G L FR  VTS   GK + A NV+P
Sbjct: 60  GPLSFR--VTSSDSGKTLVADNVIP 82

This family contains allergens lol PI, PII and PIII from Lolium perenne. Length = 82

>gnl|CDD|165628 PLN00050, PLN00050, expansin A; Provisional

 Score = 81.6 bits (201), Expect = 2e-18
 Identities = 69/221 (31%), Positives = 105/221 (47%), Gaps = 33/221 (14%)

Query: 33  ASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGRGTRVIL 92
           AS    GACGYG+L     G + AA   +L+ +G  CGACF+++C N  +    G+ +I+
Sbjct: 38  ASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCVNDNIWCLPGS-III 96

Query: 93  TDLN----------------HSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVP 136
           T  N                +  Q  F +S   F  ++         K G+V V+Y+RV 
Sbjct: 97  TATNFCPPNLALPNNDGGWCNPPQQHFDLSQPVFQKIAQ-------YKAGIVPVQYRRVA 149

Query: 137 CEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWD 196
           C  K+  +   +   S     L   V   GG  ++VA+ + +   SNW  MSRN+G  W 
Sbjct: 150 CR-KSGGIRFTINGHSYFNLVLITNV---GGAGDIVAVSI-KGSKSNWQAMSRNWGQNWQ 204

Query: 197 TSRVPNG-ALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIY 236
           ++   NG AL F+ V TS  DG+ + + N  P++W  G  Y
Sbjct: 205 SNSYLNGQALSFK-VTTS--DGRTVISNNAAPSNWAFGQTY 242

Length = 247

>gnl|CDD|217497 pfam03330, DPBB_1, Rare lipoprotein A (RlpA)-like double-psi beta-barrel

 Score = 67.2 bits (165), Expect = 9e-15
 Identities = 29/83 (34%), Positives = 37/83 (44%), Gaps = 13/83 (15%)

Query: 56  AAGVPSLYKDGAGCGACFQMRC-----KNPTLCSGRGTRVILTDLNHS-NQTDFVISSRA 109
           AAG  SLY DG  CG C+Q++C        T    R   V +TD      +  F +S  A
Sbjct: 2   AAGSASLYNDGTACGECYQVKCLTAAHPTGTCRVLRSVTVTITDRCPFPPRRHFDLSGPA 61

Query: 110 FMALSNQGKGQDILKLGVVDVEY 132
           F AL          + G+V VEY
Sbjct: 62  FEAL-------AKPRAGIVPVEY 77

Rare lipoprotein A (RlpA) contains a conserved region that has the double-psi beta-barrel (DPBB) fold. The function of RlpA is not well understood, but it has been shown to act as a prc mutant suppressor in Escherichia coli. The DPBB fold is often an enzymatic domain. The members of this family are quite diverse, and if catalytic this family may contain several different functions. Another example of this domain is found in the N terminus of pollen allergen. Length = 77

>gnl|CDD|215097 PLN00193, PLN00193, expansin-A; Provisional

 Score = 70.7 bits (173), Expect = 2e-14
 Identities = 69/237 (29%), Positives = 105/237 (44%), Gaps = 48/237 (20%)

Query: 31  SQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRC---KNPTLCSGRG 87
           S AS    GACGYG+L  +  G   AA   +L+ DGA CG C+++ C    +   C  +G
Sbjct: 41  SDASGTMGGACGYGNLYSTGYGTRTAALSTALFNDGASCGQCYRIMCDYQADSRWCI-KG 99

Query: 88  TRVILTDLNHSNQTDFVISSRAFMALSNQGKGQ------------------DILKLGVVD 129
             V +T  N               AL N   G                    I + G+V 
Sbjct: 100 ASVTITATNFCPPN---------YALPNNNGGWCNPPLQHFDMAQPAWEKIGIYRGGIVP 150

Query: 130 VEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQG----GQTEMVAMDVAQVGSSNWG 185
           V ++RVPC+       VR   + +  +Y  + VL       G  + V++  ++ G   W 
Sbjct: 151 VLFQRVPCKKHG---GVRFTINGR--DYFEL-VLISNVGGAGSIQSVSIKGSKTG---WM 201

Query: 186 YMSRNYGAVWDTSRVPNG-ALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYNSGVQ 241
            MSRN+GA W ++   +G +L F+   T   DG+  +  NV+PA+W  G  ++S VQ
Sbjct: 202 AMSRNWGANWQSNAYLDGQSLSFKVTTT---DGQTRFFLNVVPANWGFGQTFSSSVQ 255

Length = 256

>gnl|CDD|129070 smart00837, DPBB_1, Rare lipoprotein A (RlpA)-like double-psi beta-barrel

 Score = 36.7 bits (85), Expect = 0.001
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 56 AAGVPSLYKDGAGCGACFQMRCKNPTLCSGRGTRVILTDLN 96
          AA   +L+ +GA CGAC+++ C +       G  + +T  N
Sbjct: 2  AALSTALFNNGASCGACYEIMCVDSPKWCKPGGSITVTATN 42

Rare lipoprotein A (RlpA) contains a conserved region that has the double-psi beta-barrel (DPBB) fold. The function of RlpA is not well understood, but it has been shown to act as a prc mutant suppressor in Escherichia coli. The DPBB fold is often an enzymatic domain. The members of this family are quite diverse, and if catalytic this family may contain several different functions. Another example of this domain is found in the N terminus of pollen allergen. Length = 87

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	261
PLN03023	247	Expansin-like B1; Provisional	100.0
PLN00193	256	expansin-A; Provisional	100.0
PLN00050	247	expansin A; Provisional	100.0
COG4305	232	Endoglucanase C-terminal domain/subunit and relate	99.97
PLN03024	125	Putative EG45-like domain containing protein 1; Pr	99.96
PLN00115	118	pollen allergen group 3; Provisional	99.92
PF01357	82	Pollen_allerg_1: Pollen allergen; InterPro: IPR007	99.91
smart00837	87	DPBB_1 Rare lipoprotein A (RlpA)-like double-psi b	99.88
PF03330	78	DPBB_1: Rare lipoprotein A (RlpA)-like double-psi	99.76
PF00967	119	Barwin: Barwin family; InterPro: IPR001153 Barwin	98.92
PF07249	119	Cerato-platanin: Cerato-platanin; InterPro: IPR010	98.14
TIGR00413	208	rlpA rare lipoprotein A. This is a family of proka	97.85
COG0797	233	RlpA Lipoproteins [Cell envelope biogenesis, outer	97.61
PRK10672	361	rare lipoprotein A; Provisional	97.24
PF02015	201	Glyco_hydro_45: Glycosyl hydrolase family 45; Inte	89.14

>PLN03023 Expansin-like B1; Provisional

Probab=100.00  E-value=4.7e-69  Score=478.55  Aligned_cols=237  Identities=41%  Similarity=0.884  Sum_probs=218.7

Q ss_pred             hhhHHHHHHhhhccccCCCceeeEEEEeCCCCCC--CCCccCCCCCCCCCCCceEEEeChhccCCCCCCCceEEEEeCCC
Q 024895            3 LFLCFLFFLFSSATACDRCVHQTKVAYFSQASAL--SSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNP   80 (261)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~g~aT~Y~~~~g~--~~GaCGyg~~~~~~~~~~~aA~s~~~~~~g~~CG~C~~V~c~~~   80 (261)
                      |||++||+++. +..|++ |++++|||||++++.  .+|||||+++..+.+++++||+| +||++|++||+||||+|.++
T Consensus         8 ~~~~~~~~~~~-~~~~~~-W~~a~AT~Yg~~~g~gt~gGACGYg~~~~~~~g~~~aa~s-~Lf~~G~~CGaCy~irC~~~   84 (247)
T PLN03023          8 CFLCVIVLLPL-LCKSQD-FTYSRATYYGSPDCLGTPTGACGFGEYGRTVNGGNVAGVS-RLYRNGTGCGACYQVRCKAP   84 (247)
T ss_pred             HHHHHHHHhhh-hhhcCC-cccceEEEeCCCCCCCCCCccccCCccccCCCcceeeeeh-hhhcCCchhcccEEeecCCC
Confidence            67777777777 355554 999999999998755  78999999988888889999999 99999999999999999999


Q ss_pred             CcccCCCeEEEEccCCCCCCCceecCHHHHHHhhcCCCCcccccccEEEEEEEEEeeccCCCcEEEEEecCCCCCceeEE
Q 024895           81 TLCSGRGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAV  160 (261)
Q Consensus        81 ~~C~~~~v~V~VtD~Cp~~~~~~DLs~~AF~~ia~~~~~~~l~~~G~v~v~~r~V~C~~~g~ni~~~v~~gS~n~~w~av  160 (261)
                      ++|.+++|+|+|||.||.++.|||||..||.+||.++++++|++.|+|+|+||||+|.++|.+|+|+|+++|.+|+|+++
T Consensus        85 ~~C~~~~v~V~iTd~~~~~~~hFdLS~~AF~~iA~pg~~~~l~~aGiv~v~YrRVpC~~~G~~i~F~V~~~s~~p~yl~v  164 (247)
T PLN03023         85 NLCSDDGVNVVVTDYGEGDKTDFILSPRAYARLARPNMAAELFAYGVVDVEYRRIPCRYAGYNLFFKVHEHSRFPDYLAI  164 (247)
T ss_pred             CccCCCCeEEEEEeCCCCCCCccccCHHHHHHHhCccccchhccCcEEEeEEEEEecccCCCceEEEEecCCCCCceEEE
Confidence            99999999999999999999999999999999999999999999999999999999999987999999999844999999


Q ss_pred             EEEEecCccCeEEEEEEEcCCCCeEEcccCcCcEEEeCCCCCcceEEEEEEEeCCCCe-EEEEeeeeCCCCCCCcEEecC
Q 024895          161 KVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSGYDGK-WIWAKNVLPADWKPGMIYNSG  239 (261)
Q Consensus       161 ~v~n~gg~~~I~sVeV~~~g~~~W~~m~r~~g~~W~~~~~~~gpl~~Rvt~Ts~~~G~-~vv~~~vip~~~~~g~~y~t~  239 (261)
                      +|.|++|.++|++|||+++++..|++|+|+||++|+++.+++|||+||+++|. .+|+ +|+++||||++|++|++|++.
T Consensus       165 lv~~vgG~GdI~~V~Ik~~~~~~W~~M~rnwGa~W~~~~~l~Gp~slrf~v~~-~~g~~~vva~nViPa~Wk~G~TY~s~  243 (247)
T PLN03023        165 VMLYQAGQNDILAVEIWQEDCKEWRGMRKAYGAVWDMPNPPKGPITLRFQVSG-SAGQTWVQAKNVIPSDWKAGVAYDSN  243 (247)
T ss_pred             EEEEcCCCccEEEEEEEecCCCCceECccCCcceeEcCCCCCCceeEEEEEEe-CCCcEEEEECceeCCCCCCCCEEecc
Confidence            99999999999999999987789999999999999999999999999998877 5664 589999999999999999999


Q ss_pred             cccc
Q 024895          240 VQIT  243 (261)
Q Consensus       240 ~QF~  243 (261)
                      +||+
T Consensus       244 vq~~  247 (247)
T PLN03023        244 IQLD  247 (247)
T ss_pred             cccC
Confidence            9995

>PLN00193 expansin-A; Provisional

Probab=100.00  E-value=5.5e-62  Score=435.25  Aligned_cols=209  Identities=26%  Similarity=0.550  Sum_probs=191.2

Q ss_pred             CCCceeeEEEEeCCCCCC--CCCccCCCCCCCCCCCceEEEeChhccCCCCCCCceEEEEeC---CCCcccCC-CeEEEE
Q 024895           19 DRCVHQTKVAYFSQASAL--SSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCK---NPTLCSGR-GTRVIL   92 (261)
Q Consensus        19 ~~~~~~g~aT~Y~~~~g~--~~GaCGyg~~~~~~~~~~~aA~s~~~~~~g~~CG~C~~V~c~---~~~~C~~~-~v~V~V   92 (261)
                      ..+|+.|+|||||++++.  .+|||||+++...+++.++||+|+++|++|++||+||||+|.   ++++|.++ +|+|+|
T Consensus        27 ~~~W~~a~AT~Yg~~d~~gt~gGACGYg~l~~~~~g~~~AAls~~lf~~G~~CGaCyev~C~~~~~~~~C~~g~sV~Vt~  106 (256)
T PLN00193         27 PSGWTKAHATFYGGSDASGTMGGACGYGNLYSTGYGTRTAALSTALFNDGASCGQCYRIMCDYQADSRWCIKGASVTITA  106 (256)
T ss_pred             CCCceeeEEEEcCCCCCCCCCCcccCCCCccccCCCceeeecCHhHccCCccccCeEEEECCCCCCCccccCCCeEEEEE
Confidence            446999999999987653  789999999888888999999999999999999999999994   56789655 799999


Q ss_pred             ccCCCC--------------CCCceecCHHHHHHhhcCCCCcccccccEEEEEEEEEeeccCCCcEEEEEecCCCCCcee
Q 024895           93 TDLNHS--------------NQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYL  158 (261)
Q Consensus        93 tD~Cp~--------------~~~~~DLs~~AF~~ia~~~~~~~l~~~G~v~v~~r~V~C~~~g~ni~~~v~~gS~n~~w~  158 (261)
                      ||+||.              ++.|||||+.||.+||.       ++.|+++|+||||+|+++| +|+|++++   |+||+
T Consensus       107 td~CP~n~~~~~~~ggwC~~~~~HFDLS~~AF~~iA~-------~~~Giv~V~yrRVpC~~~G-~i~f~v~g---n~y~~  175 (256)
T PLN00193        107 TNFCPPNYALPNNNGGWCNPPLQHFDMAQPAWEKIGI-------YRGGIVPVLFQRVPCKKHG-GVRFTING---RDYFE  175 (256)
T ss_pred             ecCCCCcccccccCCCcCCCCCcccccCHHHHHHHhh-------hcCCeEeEEEEEeccccCC-CcEEEEcC---CccEE
Confidence            999996              46899999999999998       7899999999999999998 99999983   68999


Q ss_pred             EEEEEEecCccCeEEEEEEEcCCCCeEEcccCcCcEEEeCCCCCc-ceEEEEEEEeCCCCeEEEEeeeeCCCCCCCcEEe
Q 024895          159 AVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNG-ALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYN  237 (261)
Q Consensus       159 av~v~n~gg~~~I~sVeV~~~g~~~W~~m~r~~g~~W~~~~~~~g-pl~~Rvt~Ts~~~G~~vv~~~vip~~~~~g~~y~  237 (261)
                      +++|.|++|.++|++|+|++.+ ..|++|+|+||++|+++.++.+ ||+||||  + .+|++++..||||++|++|++|+
T Consensus       176 ~vlv~nv~G~gdV~~v~Ik~~~-~~W~~M~R~wGa~W~~~~~l~g~plsfRvt--s-~~G~~~~~~~viPa~W~~G~ty~  251 (256)
T PLN00193        176 LVLISNVGGAGSIQSVSIKGSK-TGWMAMSRNWGANWQSNAYLDGQSLSFKVT--T-TDGQTRFFLNVVPANWGFGQTFS  251 (256)
T ss_pred             EEEEEEeCCCccEEEEEEecCC-CCeeECcccccceeEecCCCCCCCEEEEEE--E-cCCeEEEECceeCCCCCCCCeEe
Confidence            9999999999999999999865 4899999999999999987765 9999995  5 67999999999999999999999


Q ss_pred             cCccc
Q 024895          238 SGVQI  242 (261)
Q Consensus       238 t~~QF  242 (261)
                      +.+||
T Consensus       252 s~vqf  256 (256)
T PLN00193        252 SSVQF  256 (256)
T ss_pred             cCccC
Confidence            99998

>PLN00050 expansin A; Provisional

Probab=100.00  E-value=2.7e-61  Score=429.24  Aligned_cols=208  Identities=29%  Similarity=0.584  Sum_probs=190.1

Q ss_pred             CCCceeeEEEEeCCCCCC--CCCccCCCCCCCCCCCceEEEeChhccCCCCCCCceEEEEeCCC-CcccCCCeEEEEccC
Q 024895           19 DRCVHQTKVAYFSQASAL--SSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNP-TLCSGRGTRVILTDL   95 (261)
Q Consensus        19 ~~~~~~g~aT~Y~~~~g~--~~GaCGyg~~~~~~~~~~~aA~s~~~~~~g~~CG~C~~V~c~~~-~~C~~~~v~V~VtD~   95 (261)
                      ..+|..++|||||++++.  .+|||||+++..++++.++||+|+.+|++|++||+||||+|.+. .+|.+++|+|+|||+
T Consensus        22 ~~~W~~a~AT~Yg~~dg~gt~gGACGYg~l~~~~~g~~~AAls~~lf~~G~~CGaCyeV~C~~~~~~C~~gsV~V~itd~  101 (247)
T PLN00050         22 GSGWTGAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCVNDNIWCLPGSIIITATNF  101 (247)
T ss_pred             CCCccccEEEEcCCCCCCCCCCcccCCCCccccCCCceeeeccHhHccCCccccceEEEEcCCCCcccCCCcEEEEEecC
Confidence            456999999999987654  68999999988888899999999999999999999999999653 579888999999999


Q ss_pred             CCC--------------CCCceecCHHHHHHhhcCCCCcccccccEEEEEEEEEeeccCCCcEEEEEecCCCCCceeEEE
Q 024895           96 NHS--------------NQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVK  161 (261)
Q Consensus        96 Cp~--------------~~~~~DLs~~AF~~ia~~~~~~~l~~~G~v~v~~r~V~C~~~g~ni~~~v~~gS~n~~w~av~  161 (261)
                      ||+              ++.|||||+.||.+||.       ++.|+|+|+||||+|+++| ||+|+++++   +||++++
T Consensus       102 CP~~~~~~~~~~gwC~~~~~hFDLS~~AF~~iA~-------~~aGii~V~yRRVpC~~~G-~i~f~v~g~---sy~~~vl  170 (247)
T PLN00050        102 CPPNLALPNNDGGWCNPPQQHFDLSQPVFQKIAQ-------YKAGIVPVQYRRVACRKSG-GIRFTINGH---SYFNLVL  170 (247)
T ss_pred             CCCCcCcCccCCCcCCCCCcccccCHHHHHHHhh-------hcCCeeeeEEEEecCcCCC-CeEEEEcCC---ceeEEEE
Confidence            996              56899999999999999       7899999999999999998 999999864   4999999


Q ss_pred             EEEecCccCeEEEEEEEcCCCCeEEcccCcCcEEEeCCCCCc-ceEEEEEEEeCCCCeEEEEeeeeCCCCCCCcEEecCc
Q 024895          162 VLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNG-ALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYNSGV  240 (261)
Q Consensus       162 v~n~gg~~~I~sVeV~~~g~~~W~~m~r~~g~~W~~~~~~~g-pl~~Rvt~Ts~~~G~~vv~~~vip~~~~~g~~y~t~~  240 (261)
                      |.|++|.++|++|+|++.+ ..|++|+|+||++|++++++.+ ||+||||  + .+|++++..||||++|++|++|++. 
T Consensus       171 v~nv~G~gdi~~V~ikg~~-~~W~~M~R~wGa~W~~~~~l~g~~lsfRvt--~-~~G~~~~~~~V~Pa~W~~G~ty~~~-  245 (247)
T PLN00050        171 ITNVGGAGDIVAVSIKGSK-SNWQAMSRNWGQNWQSNSYLNGQALSFKVT--T-SDGRTVISNNAAPSNWAFGQTYTGM-  245 (247)
T ss_pred             EEEcCCCccEEEEEEecCC-CCeeECccccCceeEccCCCCCCcEEEEEE--e-cCCcEEEECceeCCCCCCCCeEecC-
Confidence            9999999999999999865 5899999999999999987765 9999995  5 6799999999999999999999994 


Q ss_pred             cc
Q 024895          241 QI  242 (261)
Q Consensus       241 QF  242 (261)
                      ||
T Consensus       246 ~f  247 (247)
T PLN00050        246 QF  247 (247)
T ss_pred             cC
Confidence            88

>COG4305 Endoglucanase C-terminal domain/subunit and related proteins [Carbohydrate transport and metabolism]

Probab=99.97  E-value=4.5e-30  Score=215.08  Aligned_cols=194  Identities=23%  Similarity=0.317  Sum_probs=163.6

Q ss_pred             ceeeEEEEeCCCCCCCCCccCCCCCCCCCCCceEEEeChhccCCC----CCCCceEEEEeCCCCcccCCCeEEEEccCCC
Q 024895           22 VHQTKVAYFSQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDG----AGCGACFQMRCKNPTLCSGRGTRVILTDLNH   97 (261)
Q Consensus        22 ~~~g~aT~Y~~~~g~~~GaCGyg~~~~~~~~~~~aA~s~~~~~~g----~~CG~C~~V~c~~~~~C~~~~v~V~VtD~Cp   97 (261)
                      .+.|.|||-+.++  .+||=-....   +....|.|+|+.+-|-|    +.-|+.++|.  +|    ++..||.|||+-|
T Consensus        30 ~f~G~ATyTgsGY--sGGAflLDPI---~sd~eITAlNPaqlNlGGipAAmAGaYLrVq--GP----KG~TTVYVTDlYP   98 (232)
T COG4305          30 LFEGYATYTGSGY--SGGAFLLDPI---PSDMEITALNPAQLNLGGIPAAMAGAYLRVQ--GP----KGKTTVYVTDLYP   98 (232)
T ss_pred             ccceeEEEecccc--cCceEEecCc---CCcceeeecCHHHcccCCchhhhccceEEEE--CC----CCceEEEEecccc
Confidence            5799999988765  6888755433   33567999999888755    6899999998  44    3458999999999


Q ss_pred             C-CCCceecCHHHHHHhhcCCCCcccccccEEEEEEEEEeeccCCCcEEEEEecCCCCCceeEEEEEEecCccCeEEEEE
Q 024895           98 S-NQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDV  176 (261)
Q Consensus        98 ~-~~~~~DLs~~AF~~ia~~~~~~~l~~~G~v~v~~r~V~C~~~g~ni~~~v~~gS~n~~w~av~v~n~gg~~~I~sVeV  176 (261)
                      + ..+.||||+.||.+|++       +..|+++|+||.|+-|.+| |+.+++|||| +.||.+|||+||  +.+|.++|+
T Consensus        99 egasGaLDLSpNAFakIGn-------m~qGrIpvqWrvv~aPvtG-N~~YRiKeGS-s~WWAAIQVRnH--~yPV~KlE~  167 (232)
T COG4305          99 EGASGALDLSPNAFAKIGN-------MKQGRIPVQWRVVKAPVTG-NFTYRIKEGS-SRWWAAIQVRNH--KYPVMKLEY  167 (232)
T ss_pred             cccccccccChHHHhhhcc-------hhcCccceeEEEecccccc-cEEEEEecCC-ccceeeeeeecc--cCceEEEEE
Confidence            8 67899999999999999       8999999999999999998 9999999999 899999999987  799999999


Q ss_pred             EEcCCCCeEEcccCcCcEEEeCCCCCcceEEEEEEEeCCCCeEEEEeeeeCCCCC--CCcEE--ecCccccc
Q 024895          177 AQVGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSGYDGKWIWAKNVLPADWK--PGMIY--NSGVQITD  244 (261)
Q Consensus       177 ~~~g~~~W~~m~r~~g~~W~~~~~~~gpl~~Rvt~Ts~~~G~~vv~~~vip~~~~--~g~~y--~t~~QF~~  244 (261)
                      .+.  ++|+.|.+.+||+|.-.+...+||++|+  |+ +.|+.++..  +|.-.+  ..+.|  .+.+||++
T Consensus       168 ~qd--g~WinlpK~dYNhFVgT~LG~~pL~~Rm--TD-IRG~~l~Dt--lP~Lpk~asSKaY~V~G~VQFsE  232 (232)
T COG4305         168 EQD--GKWINLPKMDYNHFVGTNLGTGPLKVRM--TD-IRGKVLKDT--LPKLPKSASSKAYTVPGHVQFSE  232 (232)
T ss_pred             ecC--CeEeeccccccceeeccccCCCceEEEE--ee-cccceeecc--cccccccccCCceeecceeecCC
Confidence            976  5999999999999988888899999999  68 999988754  554333  22334  36888874

>PLN03024 Putative EG45-like domain containing protein 1; Provisional

Probab=99.96  E-value=2.2e-28  Score=197.89  Aligned_cols=99  Identities=26%  Similarity=0.565  Sum_probs=87.0

Q ss_pred             ceeeEEEEeCCCCCCCCCccCCCCCCCCCCCceEEEeChhccCCCCCCCceEEEEeCCC-----CcccCCCeEEEEccCC
Q 024895           22 VHQTKVAYFSQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNP-----TLCSGRGTRVILTDLN   96 (261)
Q Consensus        22 ~~~g~aT~Y~~~~g~~~GaCGyg~~~~~~~~~~~aA~s~~~~~~g~~CG~C~~V~c~~~-----~~C~~~~v~V~VtD~C   96 (261)
                      ..+|+||||+++   ..||| |++   ..++.++||+|+.+|++|+.||+||||+|.++     .+|++++|+|+|+|+|
T Consensus        21 ~~~G~AT~Y~~~---~~gAC-~~~---~~~g~~iaAls~~lf~~G~~CG~c~~V~C~~~~~~~~~~c~gksV~V~VtD~C   93 (125)
T PLN03024         21 ATPGIATFYTSY---TPSAC-YRG---TSFGVMIAAASDSLWNNGRVCGKMFTVKCKGPRNAVPHPCTGKSVTVKIVDHC   93 (125)
T ss_pred             ccceEEEEeCCC---CCccc-cCC---CCCCCEeEEeCHHHcCCCcccCceEEEEECCCCccccccccCCeEEEEEEcCC
Confidence            457999999875   57999 444   24678999999999999999999999999765     3799899999999999


Q ss_pred             CC-CCCceecCHHHHHHhhcCCCCcccccccEEEEEEEE
Q 024895           97 HS-NQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKR  134 (261)
Q Consensus        97 p~-~~~~~DLs~~AF~~ia~~~~~~~l~~~G~v~v~~r~  134 (261)
                      |+ ++.|||||++||.+||+       .+.|+++|+|.+
T Consensus        94 P~~C~~~~DLS~~AF~~iA~-------~~aG~v~V~y~~  125 (125)
T PLN03024         94 PSGCASTLDLSREAFAQIAN-------PVAGIINIDYIP  125 (125)
T ss_pred             CCCCCCceEcCHHHHHHhcC-------ccCCEEEEEEeC
Confidence            94 77899999999999999       678999999963

>PLN00115 pollen allergen group 3; Provisional

Probab=99.92  E-value=1e-24  Score=174.48  Aligned_cols=92  Identities=18%  Similarity=0.485  Sum_probs=83.7

Q ss_pred             CcEEEEEecCCCCCceeEEEEEEecCccCeEEEEEEEcCCCCeE-EcccCcCcEEEeCC--CCCcceEEEEEEEeCCCCe
Q 024895          142 QNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWG-YMSRNYGAVWDTSR--VPNGALQFRFVVTSGYDGK  218 (261)
Q Consensus       142 ~ni~~~v~~gS~n~~w~av~v~n~gg~~~I~sVeV~~~g~~~W~-~m~r~~g~~W~~~~--~~~gpl~~Rvt~Ts~~~G~  218 (261)
                      .+|+|+|+++| |++||++++ |    ++|.+|||+++++..|+ +|+|+||++|++++  +++|||+||++  + .+|+
T Consensus        24 ~~v~F~V~~gS-np~yL~ll~-~----~dI~~V~Ik~~g~~~W~~~M~rswGavW~~~s~~pl~GPlS~R~t--~-~~G~   94 (118)
T PLN00115         24 TEVTFKVGKGS-SSTSLELVT-N----VAISEVEIKEKGAKDWVDDLKESSTNTWTLKSKAPLKGPFSVRFL--V-KGGG   94 (118)
T ss_pred             CceEEEECCCC-CcceEEEEE-e----CCEEEEEEeecCCCcccCccccCccceeEecCCCCCCCceEEEEE--E-eCCC
Confidence            58999999999 999998765 4    36999999999888999 99999999999875  68999999995  5 6799


Q ss_pred             EEEEeeeeCCCCCCCcEEecCccc
Q 024895          219 WIWAKNVLPADWKPGMIYNSGVQI  242 (261)
Q Consensus       219 ~vv~~~vip~~~~~g~~y~t~~QF  242 (261)
                      +++.+||||++|++|++|++++||
T Consensus        95 ~~va~nViPa~Wk~G~tY~s~vq~  118 (118)
T PLN00115         95 YRVVDDVIPESFKAGSVYKTGIQV  118 (118)
T ss_pred             EEEECceECCCCCCCCEEeccccC
Confidence            999999999999999999999998

>PF01357 Pollen_allerg_1: Pollen allergen; InterPro: IPR007117 Expansins are unusual proteins that mediate cell wall extension in plants []

Probab=99.91  E-value=8.1e-24  Score=159.82  Aligned_cols=81  Identities=43%  Similarity=0.736  Sum_probs=68.1

Q ss_pred             EEEEEecCCCCCceeEEEEEEecCccCeEEEEEEEcCCCCeEEcccCcCcEEEeC-CCCCcceEEEEEEEeCCCCeEEEE
Q 024895          144 LAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTS-RVPNGALQFRFVVTSGYDGKWIWA  222 (261)
Q Consensus       144 i~~~v~~gS~n~~w~av~v~n~gg~~~I~sVeV~~~g~~~W~~m~r~~g~~W~~~-~~~~gpl~~Rvt~Ts~~~G~~vv~  222 (261)
                      |+|+|+++| |+|||+|+|.|++|.++|++|||+++++.+|++|+|+||++|+++ +++++||+||||  +..+|+++++
T Consensus         1 v~f~V~~gS-~~~~l~v~v~n~gG~gdi~~Vevk~~~s~~W~~m~r~wGa~W~~~~~~~~~pls~Rvt--s~~~G~~vv~   77 (82)
T PF01357_consen    1 VRFTVKGGS-NPYYLAVLVKNVGGDGDIKAVEVKQSGSGNWIPMKRSWGAVWQIDSNPPGGPLSFRVT--SGDSGQTVVA   77 (82)
T ss_dssp             EEEEE-TT--BTTEEEEEEEECCTTS-EEEEEEEETTSSS-EE-EEECTTEEEEE-SS--SSEEEEEE--ETTTSEEEEE
T ss_pred             CEEEECCCC-CCcEEEEEEEEcCCCccEEEEEEEeCCCCCceEeecCcCceEEECCCCcCCCEEEEEE--EcCCCeEEEE
Confidence            689999999 999999999999999999999999999989999999999999998 788999999995  5244999999


Q ss_pred             eeeeC
Q 024895          223 KNVLP  227 (261)
Q Consensus       223 ~~vip  227 (261)
                      +||||
T Consensus        78 ~nViP   82 (82)
T PF01357_consen   78 DNVIP   82 (82)
T ss_dssp             EEEE-
T ss_pred             ecccC
Confidence            99998

They are believed to act as a sort of chemical grease, allowing polymers to slide past one another by disrupting non-covalent hydrogen bonds that hold many wall polymers to one another. This process is not degradative and hence does not weaken the wall, which could otherwise rupture under internal pressure during growth. Sequence comparisons indicate at least four distinct expansin cDNAs in rice and at least six in Arabidopsis. The proteins are highly conserved in size and sequence (75-95% amino acid sequence similarity between any pairwise comparison), and phylogenetic trees indicate that this multigene family formed before the evolutionary divergence of monocotyledons and dicotyledons []. Sequence and motif analyses show no similarities to known functional domains that might account for expansin action on wall extension. It is thought that several highly-conserved tryptophans may function in expansin binding to cellulose, or other glycans. The high conservation of the family indicates that the mechanism by which expansins promote wall extensin tolerates little variation in protein structure. Grass pollens, such as pollen from timothy grass, represent a major cause of type I allergy []. Interestingly, expansins share a high degree of sequence similarity with the Lol p I family of allergens. This entry represents the C-terminal domain.; PDB: 2VXQ_A 1WHP_A 1BMW_A 1WHO_A 2HCZ_X 2JNZ_A 3FT9_A 3FT1_C 1N10_B.

>smart00837 DPBB_1 Rare lipoprotein A (RlpA)-like double-psi beta-barrel

Probab=99.88  E-value=9.3e-23  Score=155.60  Aligned_cols=71  Identities=32%  Similarity=0.659  Sum_probs=64.4

Q ss_pred             EEEeChhccCCCCCCCceEEEEeC-CCCcccCC-CeEEEEccCCCC--------------CCCceecCHHHHHHhhcCCC
Q 024895           55 LAAGVPSLYKDGAGCGACFQMRCK-NPTLCSGR-GTRVILTDLNHS--------------NQTDFVISSRAFMALSNQGK  118 (261)
Q Consensus        55 ~aA~s~~~~~~g~~CG~C~~V~c~-~~~~C~~~-~v~V~VtD~Cp~--------------~~~~~DLs~~AF~~ia~~~~  118 (261)
                      +||+|+.||++|++||+||||+|. +++.|.++ +|+|+|||+||+              ++.|||||+.||.+||.   
T Consensus         1 taA~s~~lf~~G~~CG~Cy~v~C~~~~~~C~~~~~V~V~vtd~CP~~~~~~~~~~~~C~~~~~hfDLS~~AF~~iA~---   77 (87)
T smart00837        1 TAALSTALFNNGASCGACYEIMCVDSPKWCKPGGSITVTATNFCPPNYALSNDNGGWCNPPRKHFDLSQPAFEKIAQ---   77 (87)
T ss_pred             CcccCHHHccCCccccceEEEEeCCCCCcccCCCeEEEEEeccCCccccccccCCCccCCCCcCeEcCHHHHHHHhh---
Confidence            489999999999999999999996 56689764 799999999996              36899999999999999   


Q ss_pred             CcccccccEEEEEE
Q 024895          119 GQDILKLGVVDVEY  132 (261)
Q Consensus       119 ~~~l~~~G~v~v~~  132 (261)
                          ++.|+|+|+|
T Consensus        78 ----~~~Gvi~v~y   87 (87)
T smart00837       78 ----YKAGIVPVKY   87 (87)
T ss_pred             ----hcCCEEeeEC
Confidence                7899999987

Rare lipoprotein A (RlpA) contains a conserved region that has the double-psi beta-barrel (DPBB) fold. The function of RlpA is not well understood, but it has been shown to act as a prc mutant suppressor in Escherichia coli. The DPBB fold is often an enzymatic domain. The members of this family are quite diverse, and if catalytic this family may contain several different functions. Another example of this domain is found in the N terminus of pollen allergen.

>PF03330 DPBB_1: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; InterPro: IPR009009 Beta barrels are commonly observed in protein structures

Probab=99.76  E-value=5.9e-19  Score=131.55  Aligned_cols=71  Identities=31%  Similarity=0.627  Sum_probs=60.6

Q ss_pred             EEEeChhccCCCCCCCceEEEEeC--CCCc--ccC--CCeEEEEccCCCC-CCCceecCHHHHHHhhcCCCCcccccccE
Q 024895           55 LAAGVPSLYKDGAGCGACFQMRCK--NPTL--CSG--RGTRVILTDLNHS-NQTDFVISSRAFMALSNQGKGQDILKLGV  127 (261)
Q Consensus        55 ~aA~s~~~~~~g~~CG~C~~V~c~--~~~~--C~~--~~v~V~VtD~Cp~-~~~~~DLs~~AF~~ia~~~~~~~l~~~G~  127 (261)
                      +||++..+|++|.+||+||+++|.  .+..  |..  ++|+|+|+|+||+ ++.|||||+.||++|+.       ++.|+
T Consensus         1 t~a~~~~~y~~g~~cG~~~~~~~~~~a~~~~~~~~~~ksV~v~V~D~Cp~~~~~~lDLS~~aF~~la~-------~~~G~   73 (78)
T PF03330_consen    1 TAAGSATWYDNGTACGQCYQVTCLTAASATGTCKVGNKSVTVTVVDRCPGCPPNHLDLSPAAFKALAD-------PDAGV   73 (78)
T ss_dssp             EEEE-HHHHGGGTTTT-EEEEEE---SSTT--BESEECEEEEEEEEE-TTSSSSEEEEEHHHHHHTBS-------TTCSS
T ss_pred             CeEEEhhhcCCCCcCCCeeeccccccCCccceEEecCCeEEEEEEccCCCCcCCEEEeCHHHHHHhCC-------CCceE
Confidence            589999999999999999999993  3333  766  8899999999998 78899999999999999       68999


Q ss_pred             EEEEE
Q 024895          128 VDVEY  132 (261)
Q Consensus       128 v~v~~  132 (261)
                      ++|+|
T Consensus        74 i~V~w   78 (78)
T PF03330_consen   74 IPVEW   78 (78)
T ss_dssp             EEEEE
T ss_pred             EEEEC
Confidence            99998

They are classified in terms of two integral parameters: the number of strands in the sheet, n, and the shear number, S, a measure of the stagger of the strands in the beta-sheet. These two parameters have been shown to determine the major geometrical features of beta-barrels. Six-stranded beta-barrels with a pseudo-twofold axis are found in several proteins. One involving parallel strands forming two psi structures is known as the double-psi barrel. The first psi structure consists of the loop connecting strands beta1 and beta2 (a 'psi loop') and the strand beta5, whereas the second psi structure consists of the loop connecting strands beta4 and beta5 and the strand beta2. All the psi structures in double-psi barrels have a unique handedness, in that beta1 (beta4), beta2 (beta5) and the loop following beta5 (beta2) form a right-handed helix. The unique handedness may be related to the fact that the twisting angle between the parallel pair of strands is always larger than that between the antiparallel pair [].; PDB: 1N10_B 3D30_A 2BH0_A 2HCZ_X.

>PF00967 Barwin: Barwin family; InterPro: IPR001153 Barwin is a basic protein isolated from aqueous extracts of barley seeds

Probab=98.92  E-value=7.9e-10  Score=87.37  Aligned_cols=64  Identities=22%  Similarity=0.508  Sum_probs=45.8

Q ss_pred             CCCCCCceEEEEeCCCCcccCCCeEEEEccCCCCCCCceecCHHHHHHhhcCCCCcccccccEEEEEEEEEee
Q 024895           65 DGAGCGACFQMRCKNPTLCSGRGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPC  137 (261)
Q Consensus        65 ~g~~CG~C~~V~c~~~~~C~~~~v~V~VtD~Cp~~~~~~DLs~~AF~~ia~~~~~~~l~~~G~v~v~~r~V~C  137 (261)
                      +-..||+|++|+-+.    ++..++|+|+|+|+.+  +|||++.+|.+|...|.+   ...|.+.|.|++|+|
T Consensus        56 gq~~CGkClrVTNt~----tga~~~~RIVDqCsnG--GLDld~~vF~~iDtdG~G---~~~Ghl~V~y~fV~C  119 (119)
T PF00967_consen   56 GQDSCGKCLRVTNTA----TGAQVTVRIVDQCSNG--GLDLDPTVFNQIDTDGQG---YAQGHLIVDYEFVDC  119 (119)
T ss_dssp             SGGGTT-EEEEE-TT----T--EEEEEEEEE-SSS--SEES-SSSHHHH-SSSHH---HHHTEEEEEEEEE--
T ss_pred             CcccccceEEEEecC----CCcEEEEEEEEcCCCC--CcccChhHHhhhccCCcc---cccceEEEEEEEEcC
Confidence            347899999999543    2456999999999986  999999999999764422   578999999999998

It is 125 amino acids in length, and contains six cysteine residues that combine to form three disulphide bridges [, ]. Comparative analysis shows the sequence to be highly similar to a 122 amino acid stretch in the C-terminal of the products of two wound-induced genes (win1 and win2) from potato, the product of the hevein gene of rubber trees, and pathogenesis-related protein 4 from tobacco. The high levels of similarity to these proteins, and their ability to bind saccharides, suggest that the barwin domain may be involved in a common defence mechanism in plants.; GO: 0042742 defense response to bacterium, 0050832 defense response to fungus; PDB: 1BW3_A 1BW4_A.

>PF07249 Cerato-platanin: Cerato-platanin; InterPro: IPR010829 Cerato-platanin (CP) is the first member of the cerato-platanin family

Probab=98.14  E-value=1.7e-05  Score=63.92  Aligned_cols=69  Identities=28%  Similarity=0.524  Sum_probs=48.6

Q ss_pred             eEEEeChh-ccCCCCCCCceEEEEeCCCCcccCCCeEEEEccCCCCCCCceecCHHHHHHhhcCCCCcccccccEEEEEE
Q 024895           54 HLAAGVPS-LYKDGAGCGACFQMRCKNPTLCSGRGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEY  132 (261)
Q Consensus        54 ~~aA~s~~-~~~~g~~CG~C~~V~c~~~~~C~~~~v~V~VtD~Cp~~~~~~DLs~~AF~~ia~~~~~~~l~~~G~v~v~~  132 (261)
                      +|.+.... -| |...||.|+|++-.      ++++.|...|.-++   .|+|+.+||+.|.+. ++   ...|+|+++|
T Consensus        44 ~IGg~~~V~gW-nS~~CGtC~~lty~------g~si~vlaID~a~~---gfnis~~A~n~LT~g-~a---~~lG~V~a~~  109 (119)
T PF07249_consen   44 YIGGAPAVAGW-NSPNCGTCWKLTYN------GRSIYVLAIDHAGG---GFNISLDAMNDLTNG-QA---VELGRVDATY  109 (119)
T ss_dssp             SEEEETT--ST-T-TTTT-EEEEEET------TEEEEEEEEEE-SS---SEEE-HHHHHHHHTS--C---CCC-EEE-EE
T ss_pred             eeccccccccC-CCCCCCCeEEEEEC------CeEEEEEEEecCCC---cccchHHHHHHhcCC-cc---cceeEEEEEE
Confidence            57777764 46 55899999999973      46799999998544   699999999999883 22   3569999999


Q ss_pred             EEEe
Q 024895          133 KRVP  136 (261)
Q Consensus       133 r~V~  136 (261)
                      ++|+
T Consensus       110 ~qV~  113 (119)
T PF07249_consen  110 TQVD  113 (119)
T ss_dssp             EEE-
T ss_pred             EEcC
Confidence            9996

It is produced by the Ascomycete Ceratocystis fimbriata f. sp. platani and causes the severe plant disease: canker stain. This protein occurs in the cell wall of the fungus and is involved in the host-plane interaction and induces both cell necrosis and phytoalexin synthesis which is one of the first plant defense-related events. CP, like other fungal surface proteins, is able to self assemble in vitro []. CP is a 120 amino acid protein, containing 40% hydrophobic residues and two S-S bridges. It contains four cysteine residues that form two disulphide bonds []. The N-terminal region of CP is very similar to cerato-ulmin, a phytotoxic protein produced by the Ophiostoma species belonging to the hydrophobin family, which also self-assembles []. This entry also includes other precursor proteins.; PDB: 2KQA_A 3M3G_A.

>TIGR00413 rlpA rare lipoprotein A

Probab=97.85  E-value=0.00018  Score=62.96  Aligned_cols=92  Identities=14%  Similarity=0.095  Sum_probs=68.1

Q ss_pred             eEEEEeCCCC-CCCCCccCCCCCCCCCCC--ceEEEeChhccCCCCCCCceEEEEeCCCCcccCCCeEEEEccCCCC-CC
Q 024895           25 TKVAYFSQAS-ALSSGACGYGSLALSFNG--GHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGRGTRVILTDLNHS-NQ  100 (261)
Q Consensus        25 g~aT~Y~~~~-g~~~GaCGyg~~~~~~~~--~~~aA~s~~~~~~g~~CG~C~~V~c~~~~~C~~~~v~V~VtD~Cp~-~~  100 (261)
                      |.|+|||..- | ...|.|-      .+.  .++||-. .+     ..|..++|+....    +++|+|+|.|++|. +.
T Consensus         1 G~ASwYg~~f~G-~~TAnGe------~y~~~~~tAAHk-tL-----PlgT~V~VtNl~n----grsviVrVnDRGPf~~g   63 (208)
T TIGR00413         1 GLASWYGPKFHG-RKTANGE------VYNMKALTAAHK-TL-----PFNTYVKVTNLHN----NRSVIVRINDRGPFSDD   63 (208)
T ss_pred             CEEeEeCCCCCC-CcCCCCe------ecCCCccccccc-cC-----CCCCEEEEEECCC----CCEEEEEEeCCCCCCCC
Confidence            6799999742 2 2344432      222  2444433 33     7899999996542    57899999999998 66


Q ss_pred             CceecCHHHHHHhhcCCCCcccccccEEEEEEEEEeeccC
Q 024895          101 TDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYK  140 (261)
Q Consensus       101 ~~~DLs~~AF~~ia~~~~~~~l~~~G~v~v~~r~V~C~~~  140 (261)
                      .-+|||..|+.+|+.       ...|+.+|+.+.+.....
T Consensus        64 RiIDLS~aAA~~Lg~-------~~~G~a~V~vevl~~~~~   96 (208)
T TIGR00413        64 RIIDLSHAAAREIGL-------ISRGVGQVRIEVLHVAKN   96 (208)
T ss_pred             CEEECCHHHHHHcCC-------CcCceEEEEEEEEecCCC
Confidence            799999999999998       689999999999987654

This is a family of prokaryotic proteins with unknown function. Lipoprotein annotation based on the presence of consensus lipoprotein signal sequence. Included in this family is the E. coli putative lipoprotein rlpA.

>COG0797 RlpA Lipoproteins [Cell envelope biogenesis, outer membrane]

Probab=97.61  E-value=0.00046  Score=61.42  Aligned_cols=58  Identities=17%  Similarity=0.150  Sum_probs=49.8

Q ss_pred             CceEEEEeCCCCcccCCCeEEEEccCCCC-CCCceecCHHHHHHhhcCCCCcccccccEEEEEEEEEeec
Q 024895           70 GACFQMRCKNPTLCSGRGTRVILTDLNHS-NQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCE  138 (261)
Q Consensus        70 G~C~~V~c~~~~~C~~~~v~V~VtD~Cp~-~~~~~DLs~~AF~~ia~~~~~~~l~~~G~v~v~~r~V~C~  138 (261)
                      |.-.+|+-.++    +++|.|+|.|++|. ..-.||||..|+++|+.       .+.|+.+|+.+.+.+.
T Consensus       120 ~t~v~VtNl~N----grsvvVRINDRGPf~~gRiIDlS~aAA~~l~~-------~~~G~a~V~i~~l~~~  178 (233)
T COG0797         120 PTYVRVTNLDN----GRSVVVRINDRGPFVSGRIIDLSKAAADKLGM-------IRSGVAKVRIEVLGVA  178 (233)
T ss_pred             CCEEEEEEccC----CcEEEEEEeCCCCCCCCcEeEcCHHHHHHhCC-------ccCceEEEEEEEeccc
Confidence            56778987653    67899999999998 56689999999999999       6889999999999865

>PRK10672 rare lipoprotein A; Provisional

Probab=97.24  E-value=0.0033  Score=59.47  Aligned_cols=90  Identities=17%  Similarity=0.040  Sum_probs=61.5

Q ss_pred             eeeEEEEeCCCCCCCCCccCCCCCCCCCCC--ceEEEeChhccCCCCCCCceEEEEeCCCCcccCCCeEEEEccCCCC-C
Q 024895           23 HQTKVAYFSQASALSSGACGYGSLALSFNG--GHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGRGTRVILTDLNHS-N   99 (261)
Q Consensus        23 ~~g~aT~Y~~~~g~~~GaCGyg~~~~~~~~--~~~aA~s~~~~~~g~~CG~C~~V~c~~~~~C~~~~v~V~VtD~Cp~-~   99 (261)
                      ..|.|+|||....-..-|-|      +.+.  .++||-. .|     .-|..++|+..+.    +++|+|+|.|++|. +
T Consensus        79 ~~G~ASwYg~~f~G~~TA~G------e~~~~~~~tAAH~-tL-----Plps~vrVtNl~n----grsvvVrVnDRGP~~~  142 (361)
T PRK10672         79 QAGLAAIYDAEAGSNLTASG------ERFDPNALTAAHP-TL-----PIPSYVRVTNLAN----GRMIVVRINDRGPYGP  142 (361)
T ss_pred             eEEEEEEeCCccCCCcCcCc------eeecCCcCeeecc-CC-----CCCCEEEEEECCC----CcEEEEEEeCCCCCCC
Confidence            37888888865210112222      2222  2444443 32     5688899997653    67899999999998 5


Q ss_pred             CCceecCHHHHHHhhcCCCCcccccccEEEEEEEEE
Q 024895          100 QTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRV  135 (261)
Q Consensus       100 ~~~~DLs~~AF~~ia~~~~~~~l~~~G~v~v~~r~V  135 (261)
                      ..-||||..|+.+|+.       ...+.|.|+.-.|
T Consensus       143 gRiiDLS~aAA~~Lg~-------~~~~~V~ve~i~v  171 (361)
T PRK10672        143 GRVIDLSRAAADRLNT-------SNNTKVRIDPIIV  171 (361)
T ss_pred             CCeeEcCHHHHHHhCC-------CCCceEEEEEEee
Confidence            6689999999999998       4557788877766

>PF02015 Glyco_hydro_45: Glycosyl hydrolase family 45; InterPro: IPR000334 O-Glycosyl hydrolases 3

Probab=89.14  E-value=0.25  Score=43.22  Aligned_cols=41  Identities=17%  Similarity=0.355  Sum_probs=27.8

Q ss_pred             CCCCceEEEEeCCCCcccCCCeEEEEccCCCC-CCCceecCHH
Q 024895           67 AGCGACFQMRCKNPTLCSGRGTRVILTDLNHS-NQTDFVISSR  108 (261)
Q Consensus        67 ~~CG~C~~V~c~~~~~C~~~~v~V~VtD~Cp~-~~~~~DLs~~  108 (261)
                      ..|++|||++=++. .-.+|...|+||+.--+ ..+||||.-.
T Consensus        82 ~~Cc~Cy~LtFt~g-~l~GKkmiVQ~tNtG~dlg~n~FDl~iP  123 (201)
T PF02015_consen   82 SWCCACYELTFTSG-PLKGKKMIVQVTNTGGDLGSNQFDLAIP  123 (201)
T ss_dssp             HHTT-EEEEEE-SS-TTTT-EEEEEEEEE-TTTTTTEEEEE-T
T ss_pred             CcccceEEEEEcCC-CcCCCEeEEEecccCCCCCCCeEEEEeC
Confidence            67999999998752 22456799999988766 7789998654

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 45 GH45 from CAZY comprises enzymes with only one known activity; endoglucanase (3.2.1.4 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes such as endoglucanases, cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) [, ]. Fungi and bacteria produce a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family K or as the glycosyl hydrolases family 45 []. The best conserved regions in these enzymes is located in the N-terminal section. It contains an aspartic acid residue which has been shown [] to act as a nucleophile in the catalytic mechanism. This also has several cysteines that are involved in forming disulphide bridges.; GO: 0008810 cellulase activity, 0005975 carbohydrate metabolic process; PDB: 1OA7_A 1OA9_A 1L8F_A 1HD5_A 4ENG_A 3ENG_A 2ENG_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	261
2hcz_X	245	Crystal Structure Of Expb1 (Zea M 1), A Beta-Expans		1e-32
1n10_A	241	Crystal Structure Of Phl P 1, A Major Timothy Grass		1e-26

>pdb|2HCZ|X Chain X, Crystal Structure Of Expb1 (Zea M 1), A Beta-Expansin And Group-1 Pollen Allergen From Maize Length = 245

Iteration: 1
 Score =  136 bits (343), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 115/209 (55%), Gaps = 9/209 (4%)
Query: 39  GACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGRGTRVILTDLNHS 98
           GACG  ++ L    G  A G   ++KDG GCG+C+++RCK    CSG    V +TD+N+ 
Sbjct: 40  GACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVYITDMNYE 99
Query: 99  N--QTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYK-NQNLAVRVEESSQKP 155
                 F +S +AF +L+  G    I   G++DVE++RV C+Y   Q +   +E+    P
Sbjct: 100 PIAPYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCN-P 158
Query: 156 NYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVW--DTSRVPNGALQFRFVVTS 213
           NYLAV V Y     ++V M++    S+ W  M  ++GA+W  DT++   G    R    S
Sbjct: 159 NYLAVLVKYVADDGDIVLMEIQDKLSAEWKPMKLSWGAIWRMDTAKALKGPFSIRLTSES 218
Query: 214 GYDGKWIWAKNVLPADWKPGMIYNSGVQI 242
              GK + AK+V+PA+W+P  +Y S VQ 
Sbjct: 219 ---GKKVIAKDVIPANWRPDAVYTSNVQF 244

>pdb|1N10|A Chain A, Crystal Structure Of Phl P 1, A Major Timothy Grass Pollen Allergen Length = 241

Iteration: 1
 Score =  116 bits (290), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 99/204 (48%), Gaps = 7/204 (3%)
Query: 39  GACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGRGTRVILTDLNHS 98
           GACGY  +      G    G   ++K G GCG+CF+++C  P  CSG    V +TD N  
Sbjct: 40  GACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTKPEACSGEPVVVHITDDNEE 99
Query: 99  N--QTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPN 156
                 F +S  AF A++ +G  Q +   G ++++++RV C+Y          E    PN
Sbjct: 100 PIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRVKCKYPEGTKVTFHVEKGSNPN 159
Query: 157 YLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVW--DTSRVPNGALQFRFVVTSG 214
           YLA+ V Y  G  ++VA+D+ + G   W  +  ++GA+W  DT     G    R+    G
Sbjct: 160 YLALLVKYVNGDGDVVAVDIKEKGKDKWIELKESWGAIWRIDTPDKLTGPFTVRYTTEGG 219
Query: 215 YDGKWIWAKNVLPADWKPGMIYNS 238
              +   A++V+P  WK    Y S
Sbjct: 220 TKTE---AEDVIPEGWKADTSYES 240

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	261
2hcz_X	245	Beta-expansin 1A; domain 1 is A beta barrel and do	6e-56
1n10_A	241	PHL P I, pollen allergen PHL P 1; plant allergen,	9e-55
2jnz_A	108	PHL P 3 allergen; timothy grass pollen; NMR {Phleu	2e-30
3ft1_A	100	PHL P 3 allergen; beta-barrel; 1.79A {Phleum prate	3e-30
3d30_A	208	YOAJ, expansin like protein; peptidoglycan associa	2e-28
1bmw_A	96	PHL P II, pollen allergen PHL P2; allergy, immunog	1e-25
1wc2_A	181	Endoglucanase; hydrolase, cellulase, cellulose, do	8e-06

>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays} Length = 245

 Score =  178 bits (453), Expect = 6e-56
 Identities = 75/212 (35%), Positives = 113/212 (53%), Gaps = 7/212 (3%)

Query: 34  SALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGRGTRVILT 93
           +  + GACG  ++ L    G  A G   ++KDG GCG+C+++RCK    CSG    V +T
Sbjct: 35  APDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVYIT 94

Query: 94  DLNH--SNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEES 151
           D+N+       F +S +AF +L+  G    I   G++DVE++RV C+Y      V   E 
Sbjct: 95  DMNYEPIAPYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEK 154

Query: 152 SQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVW--DTSRVPNGALQFRF 209
              PNYLAV V Y     ++V M++    S+ W  M  ++GA+W  DT++   G    R 
Sbjct: 155 GCNPNYLAVLVKYVADDGDIVLMEIQDKLSAEWKPMKLSWGAIWRMDTAKALKGPFSIRL 214

Query: 210 VVTSGYDGKWIWAKNVLPADWKPGMIYNSGVQ 241
                  GK + AK+V+PA+W+P  +Y S VQ
Sbjct: 215 TSE---SGKKVIAKDVIPANWRPDAVYTSNVQ 243

>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3 Length = 241

 Score =  175 bits (445), Expect = 9e-55
 Identities = 62/207 (29%), Positives = 97/207 (46%), Gaps = 3/207 (1%)

Query: 34  SALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGRGTRVILT 93
              + GACGY  +      G    G   ++K G GCG+CF+++C  P  CSG    V +T
Sbjct: 35  PKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTKPEACSGEPVVVHIT 94

Query: 94  DLNH--SNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEES 151
           D N        F +S  AF A++ +G  Q +   G ++++++RV C+Y          E 
Sbjct: 95  DDNEEPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRVKCKYPEGTKVTFHVEK 154

Query: 152 SQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVV 211
              PNYLA+ V Y  G  ++VA+D+ + G   W  +  ++GA+W           F    
Sbjct: 155 GSNPNYLALLVKYVNGDGDVVAVDIKEKGKDKWIELKESWGAIWRIDTPDKLTGPFTVRY 214

Query: 212 TSGYDGKWIWAKNVLPADWKPGMIYNS 238
           T+   G    A++V+P  WK    Y S
Sbjct: 215 TTE-GGTKTEAEDVIPEGWKADTSYES 240

>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense} Length = 108

 Score =  108 bits (272), Expect = 2e-30
 Identities = 22/110 (20%), Positives = 40/110 (36%), Gaps = 11/110 (10%)

Query: 132 YKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNY 191
           +           +   V++ S  P  L + + Y      +  +++ Q GS  W  +++  
Sbjct: 7   HHHGSA----VQVTFTVQKGS-DPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTKK- 60

Query: 192 GAVW--DTSRVPNGALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYNSG 239
           G VW   +S+   G   FRF+      G       V+P  +  G  Y   
Sbjct: 61  GNVWEVKSSKPLVGPFNFRFMSK---GGMRNVFDEVIPTAFSIGKTYKPE 107

>3ft1_A PHL P 3 allergen; beta-barrel; 1.79A {Phleum pratense} PDB: 3ft9_A Length = 100

 Score =  108 bits (270), Expect = 3e-30
 Identities = 23/102 (22%), Positives = 40/102 (39%), Gaps = 7/102 (6%)

Query: 142 QNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVW--DTSR 199
             +   V++ S  P  L + + Y      +  +++ Q GS  W  +++  G VW   +S+
Sbjct: 2   VQVTFTVQKGS-DPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTKK-GNVWEVKSSK 59

Query: 200 VPNGALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYNSGVQ 241
              G   FRF+      G       V+P  +  G  Y    Q
Sbjct: 60  PLVGPFNFRFMSK---GGMRNVFDEVIPTAFSIGKTYKPEEQ 98

>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A Length = 208

 Score =  106 bits (267), Expect = 2e-28
 Identities = 37/215 (17%), Positives = 74/215 (34%), Gaps = 32/215 (14%)

Query: 34  SALSSGACGYGSLALSFNGGHLAAGVPSLYKDG----AGCGACFQMRCKNPTLCSGRGTR 89
           S  S GA     +    +   + A  P+    G    A  G+  ++            T 
Sbjct: 16  SGYSGGAFLLDPIP---SDMEITAINPADLNYGGVKAALAGSYLEVEGPKGK------TT 66

Query: 90  VILTDLNHS-NQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRV 148
           V +TDL     +    +S  AF  + N   G        ++++++ V       N   R+
Sbjct: 67  VYVTDLYPEGARGALDLSPNAFRKIGNMKDG-------KINIKWRVVKAPITG-NFTYRI 118

Query: 149 EESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQFR 208
           +E S    + A++V  +  +  ++ M+        W  M +     + ++ +  G+L+ R
Sbjct: 119 KEGS-SRWWAAIQV--RNHKYPVMKMEYE--KDGKWINMEKMDYNHFVSTNLGTGSLKVR 173

Query: 209 FVVTSGYDGKWIWAKNVL--PADWKPGMIYNSGVQ 241
             +T    GK +         +           VQ
Sbjct: 174 --MTDI-RGKVVKDTIPKLPESGTSKAYTVPGHVQ 205

>1bmw_A PHL P II, pollen allergen PHL P2; allergy, immunoglobulins, immunology,; NMR {Phleum pratense} SCOP: b.7.3.1 PDB: 1who_A 1whp_A 2vxq_A Length = 96

 Score = 95.7 bits (238), Expect = 1e-25
 Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 8/99 (8%)

Query: 143 NLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVW--DTSRV 200
            +   VE+ S    +LAV V Y+G    M  +++ + GS  W  M++  G VW  D+   
Sbjct: 3   KVTFTVEKGS-NEKHLAVLVKYEGD--TMAEVELREHGSDEWVAMTKGEGGVWTFDSEEP 59

Query: 201 PNGALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYNSG 239
             G   FRF+      G      +V+P  +  G  Y   
Sbjct: 60  LQGPFNFRFLTE---KGMKNVFDDVVPEKYTIGATYAPE 95

>1wc2_A Endoglucanase; hydrolase, cellulase, cellulose, double-PSI fold, glycoside hydrolase; 1.2A {Mytilus edulis} SCOP: b.52.1.1 Length = 181

 Score = 44.2 bits (103), Expect = 8e-06
 Identities = 21/135 (15%), Positives = 38/135 (28%), Gaps = 31/135 (22%)

Query: 37  SSGACGYGSLALSF-----NGGHLAAGVPSLYKD------GAGCGACFQMRCKNPTLCS- 84
             GACG G  +         G  +AA     +        G  CG C ++      +   
Sbjct: 26  HKGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGGYVPGQ 85

Query: 85  ------GRGTRVILTDL--------NHSNQTDFVISSRAFMA-----LSNQGKGQDILKL 125
                 G     ++T+L        +  NQ         +       L N       +  
Sbjct: 86  GGPVREGLSKTFMITNLCPNIYPNQDWCNQGSQYGGHNKYGYELHLDLENGRSQVTGMGW 145

Query: 126 GVVDVEYKRVPCEYK 140
              +  ++ V C+ +
Sbjct: 146 NNPETTWEVVNCDSE 160

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	261
2hcz_X	245	Beta-expansin 1A; domain 1 is A beta barrel and do	100.0
1n10_A	241	PHL P I, pollen allergen PHL P 1; plant allergen,	100.0
3d30_A	208	YOAJ, expansin like protein; peptidoglycan associa	100.0
3ft1_A	100	PHL P 3 allergen; beta-barrel; 1.79A {Phleum prate	99.96
1wc2_A	181	Endoglucanase; hydrolase, cellulase, cellulose, do	99.95
2jnz_A	108	PHL P 3 allergen; timothy grass pollen; NMR {Phleu	99.94
1bmw_A	96	PHL P II, pollen allergen PHL P2; allergy, immunog	99.92
1bw3_A	125	Barwin, basic barley SEED protein; lectin; NMR {Ho	99.63
4avr_A	95	PA4485; unknown function, GRAM-negative bacteria,	99.16
3m3g_A	120	EPL1 protein; fungal, plant defense, fungus, polys	98.03
2kqa_A	129	Cerato-platanin; elicitor, secreted, toxin; NMR {C	98.01
3sul_A	122	Cerato-platanin-like protein; double PSI beta barr	97.98
3suj_A	127	Cerato-platanin 1; double PSI beta barrel, unknown	97.86
3suk_A	125	Cerato-platanin-like protein; double PSI beta barr	97.85
3sum_A	136	Cerato-platanin-like protein; double PSI beta barr	97.8
2eng_A	210	Endoglucanase V; cellulose degradation, hydrolase	93.45

>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays}

Probab=100.00  E-value=2.4e-66  Score=462.48  Aligned_cols=222  Identities=34%  Similarity=0.697  Sum_probs=207.3

Q ss_pred             ccCCCceeeEEEEeCCCCCC----CCCccCCCCCCCCCCCceEEEeChhccCCCCCCCceEEEEeCCCCcccCCCeEEEE
Q 024895           17 ACDRCVHQTKVAYFSQASAL----SSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGRGTRVIL   92 (261)
Q Consensus        17 ~~~~~~~~g~aT~Y~~~~g~----~~GaCGyg~~~~~~~~~~~aA~s~~~~~~g~~CG~C~~V~c~~~~~C~~~~v~V~V   92 (261)
                      .++.+|+.|+||||+++++.    .+|||||+++...+++.++||+|+.+|++|+.||+||||+|.+++.|.+++|+|+|
T Consensus        14 ~~~~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~~~~~p~~~~~aAls~~lf~~G~~CG~Cy~V~c~~~~~C~~~sv~V~V   93 (245)
T 2hcz_X           14 NYNGKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVYI   93 (245)
T ss_dssp             CCCCCCEEEEEEECSCTTSCSSTTSCCTTCCCCTTSTTTTTCEEEECHHHHGGGTSTTCEEEEECCSSSSBCSSCEEEEE
T ss_pred             ccCCceeeeEEEEeCCCCCCCcCCCCccCCCCCCCcCCCCCEEEEeCHHHcCCchhcCCeEEEEeCCCCccCCCCEEEEE
Confidence            46778999999999988643    37999999988888899999999999999999999999999888889988999999


Q ss_pred             ccCCCC--CCCceecCHHHHHHhhcCCCCcccccccEEEEEEEEEeeccCC-CcEEEEEecCCCCCceeEEEEEEecCcc
Q 024895           93 TDLNHS--NQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKN-QNLAVRVEESSQKPNYLAVKVLYQGGQT  169 (261)
Q Consensus        93 tD~Cp~--~~~~~DLs~~AF~~ia~~~~~~~l~~~G~v~v~~r~V~C~~~g-~ni~~~v~~gS~n~~w~av~v~n~gg~~  169 (261)
                      ||+||.  ++.|||||+.||.+||+++++++|++.|+|+|+||||+|+++| .||+|++++|| |+||++|+|.|++|.+
T Consensus        94 tD~C~C~~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrrV~C~~~gg~ni~f~v~~Gs-~~~~~avlv~n~~g~g  172 (245)
T 2hcz_X           94 TDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGC-NPNYLAVLVKYVADDG  172 (245)
T ss_dssp             EEECCCTTSSSEEEECHHHHHHTBCTTCHHHHTTTCCEEEEEEEECCCCSTTCCCEEEECCCC-SSSCCCEEEECCCTTC
T ss_pred             EeccCCCCCCccEEcCHHHHHHHhccccccccccCCEEEEEEEEEecCCCCCCcEEEEEcCCC-CcceEEEEEEecCCCC
Confidence            999987  7899999999999999999999999999999999999999983 58999999998 8999999999999999


Q ss_pred             CeEEEEEEEcCCCCeEEcccCcCcEEEeCCC--CCcceEEEEEEEeCCCCeEEEEeeeeCCCCCCCcEEecCccc
Q 024895          170 EMVAMDVAQVGSSNWGYMSRNYGAVWDTSRV--PNGALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYNSGVQI  242 (261)
Q Consensus       170 ~I~sVeV~~~g~~~W~~m~r~~g~~W~~~~~--~~gpl~~Rvt~Ts~~~G~~vv~~~vip~~~~~g~~y~t~~QF  242 (261)
                      +|++|||+++++..|++|+|+|||+|++++.  +++||+|||  |+ .+|++|+++||||++|++|++|++.+||
T Consensus       173 ~V~~V~ik~~~~~~W~~m~r~~G~~W~~~~~~~l~gpls~Rv--T~-~~G~~v~~~nViP~~w~~g~ty~~~~qf  244 (245)
T 2hcz_X          173 DIVLMEIQDKLSAEWKPMKLSWGAIWRMDTAKALKGPFSIRL--TS-ESGKKVIAKDVIPANWRPDAVYTSNVQF  244 (245)
T ss_dssp             CEEEEEBCCSSSCSCBCCEEEETTEEECSCCSSCCSSCCEEE--EE-TTSCEEEESCSCCSSCCTTCEEECSCCC
T ss_pred             CEEEEEEEeCCCCceeECccCCCCEEEECCCCCCCCCEEEEE--EE-eCCcEEEEeeeecCCCCCCCEEeCcccc
Confidence            9999999998777999999999999999975  789999999  56 8999999999999999999999999999

>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3

Probab=100.00  E-value=1.8e-65  Score=455.64  Aligned_cols=220  Identities=30%  Similarity=0.649  Sum_probs=199.9

Q ss_pred             cccCCCceeeEEEEeCCCCCC----CCCccCCCCCCCCCCCceEEEeChhccCCCCCCCceEEEEeCCCCcccCCCeEEE
Q 024895           16 TACDRCVHQTKVAYFSQASAL----SSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGRGTRVI   91 (261)
Q Consensus        16 ~~~~~~~~~g~aT~Y~~~~g~----~~GaCGyg~~~~~~~~~~~aA~s~~~~~~g~~CG~C~~V~c~~~~~C~~~~v~V~   91 (261)
                      ..++.+|+.|+||||+++++.    .+|||||+++...+++.++||+|+.+|++|+.||+||||+|.+++.|.+++|+|+
T Consensus        13 ~~~~~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~~~~~~~g~~~aAls~~lf~~G~~CG~CyeV~c~~~~~C~~~~v~V~   92 (241)
T 1n10_A           13 ATYGDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTKPEACSGEPVVVH   92 (241)
T ss_dssp             CBCCCSCEEEEEEEEC----------CCTTCCCCTTSTTTTTCEEEECHHHHGGGTTSSCEEEEEECSSTTBCSCCEEEE
T ss_pred             CcccCCceeeEEEEeCCCCCCCcCCCCeeCCCCCcCcCCCCcEEEEeCHHHccCcccCCCeEEEEeCCCCccCCCCEEEE
Confidence            346788999999999987643    4899999998888889999999999999999999999999988778998999999


Q ss_pred             EccCCCC--CCCceecCHHHHHHhhcCCCCcccccccEEEEEEEEEeeccCC-CcEEEEEecCCCCCceeEEEEEEecCc
Q 024895           92 LTDLNHS--NQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKN-QNLAVRVEESSQKPNYLAVKVLYQGGQ  168 (261)
Q Consensus        92 VtD~Cp~--~~~~~DLs~~AF~~ia~~~~~~~l~~~G~v~v~~r~V~C~~~g-~ni~~~v~~gS~n~~w~av~v~n~gg~  168 (261)
                      |||+|+.  ++.|||||+.||.+||++|++++|++.|+|+|+||||+|+++| .||+|++++|| |+||++|+|.|++|.
T Consensus        93 VtD~C~C~~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrrV~C~~~gg~~i~f~v~~Gs-~~~~~~vlv~n~~g~  171 (241)
T 1n10_A           93 ITDDNEEPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRVKCKYPEGTKVTFHVEKGS-NPNYLALLVKYVNGD  171 (241)
T ss_dssp             EEEECSSCSSSSEEEEEHHHHHTTBSTTCHHHHHTTCSEEEEEEECCCCCCTTCCCEEEECTTC-BTTEEEEEEECCCCS
T ss_pred             EeEecCCCCCCcceecCHHHHHHhhccCcccccccCCEEEEEEEEEeCCCCCCCceEEEEcCCC-CcceEEEEEEecCCC
Confidence            9999865  6799999999999999999999999999999999999999984 59999999998 899999999999999


Q ss_pred             cCeEEEEEEEcCCCCeEEcccCcCcEEEeCCC--CCcceEEEEEEEeCCCCeEEEEeeeeCCCCCCCcEEecC
Q 024895          169 TEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRV--PNGALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYNSG  239 (261)
Q Consensus       169 ~~I~sVeV~~~g~~~W~~m~r~~g~~W~~~~~--~~gpl~~Rvt~Ts~~~G~~vv~~~vip~~~~~g~~y~t~  239 (261)
                      ++|++|||+++++..|++|+|+|||+|++++.  +++||+|||  |+ .+|++|+++||||++|++|++|++.
T Consensus       172 g~V~~V~ik~~~~~~W~~m~r~wG~~W~~~~~~~l~gpls~Rv--T~-~~G~~v~~~nViP~~w~~g~ty~~~  241 (241)
T 1n10_A          172 GDVVAVDIKEKGKDKWIELKESWGAIWRIDTPDKLTGPFTVRY--TT-EGGTKTEAEDVIPEGWKADTSYESK  241 (241)
T ss_dssp             SCEEEEEEEETTCCCCEECBCCTTTCEEEECSSCCCSCEEEEE--EE-SSSCEEEEEEEECSSCCSSEEEEC-
T ss_pred             CCEEEEEEEeCCCCCeEECccCcCcEEEeCCCCCCCCCEEEEE--EE-eCCcEEEEccccCCCCCCCCEEeCC
Confidence            99999999998778999999999999999875  789999999  56 8999999999999999999999873

>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A

Probab=100.00  E-value=8.1e-54  Score=373.71  Aligned_cols=195  Identities=21%  Similarity=0.285  Sum_probs=176.7

Q ss_pred             CceeeEEEEeCCCCCCCCCccCCCCCCCCCCCceEEEeChhccCCC----CCCCceEEEEeCCCCcccCCCeEEEEccCC
Q 024895           21 CVHQTKVAYFSQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDG----AGCGACFQMRCKNPTLCSGRGTRVILTDLN   96 (261)
Q Consensus        21 ~~~~g~aT~Y~~~~g~~~GaCGyg~~~~~~~~~~~aA~s~~~~~~g----~~CG~C~~V~c~~~~~C~~~~v~V~VtD~C   96 (261)
                      +.+.|+||||+++.  .+||||+..   .+++.++||+|+.+|++|    ..||+||||+|.      +++|+|+|+|+|
T Consensus         5 ~~~~G~aT~Y~~g~--~~GACG~~~---~~~~~~~aAls~~~f~~G~~~~~~CG~c~~v~~~------~gsv~V~v~D~C   73 (208)
T 3d30_A            5 DLHEGYATYTGSGY--SGGAFLLDP---IPSDMEITAINPADLNYGGVKAALAGSYLEVEGP------KGKTTVYVTDLY   73 (208)
T ss_dssp             CCEEEEEEECSTTS--SSCTTCCCC---CCTTCCEEEECHHHHTGGGCTTTTTTCEEEEEET------TEEEEEEEEEEC
T ss_pred             CcEEEEEEEcCCCC--CCCcCCCCC---CCCCCEEEEeCHHHhCCCCcCccccCCEEEEEeC------CCcEEEEEEECC
Confidence            46899999999864  589999864   345789999999999988    899999999983      357999999999


Q ss_pred             CC-CCCceecCHHHHHHhhcCCCCcccccccEEEEEEEEEeeccCCCcEEEEEecCCCCCceeEEEEEEecCccCeEEEE
Q 024895           97 HS-NQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMD  175 (261)
Q Consensus        97 p~-~~~~~DLs~~AF~~ia~~~~~~~l~~~G~v~v~~r~V~C~~~g~ni~~~v~~gS~n~~w~av~v~n~gg~~~I~sVe  175 (261)
                      |+ ++.|||||+.||.+||.       ++.|+++|+||+|+|+++| +|+|++++|| |+||++|+|.|+++  +|++||
T Consensus        74 P~C~~~~~DLS~~aF~~la~-------~~~G~i~v~~~~V~C~~~G-~i~f~v~~Gs-~~~~~~v~v~n~~g--~v~~v~  142 (208)
T 3d30_A           74 PEGARGALDLSPNAFRKIGN-------MKDGKINIKWRVVKAPITG-NFTYRIKEGS-SRWWAAIQVRNHKY--PVMKME  142 (208)
T ss_dssp             TTCCTTCEEECHHHHHHHSC-------GGGSSEEEEEEEECCCCCS-CCEEEECTTC-SSSEEEEEEESCSS--CEEEEE
T ss_pred             CCCCCCeEECCHHHHHHhcc-------cCCCEEEEEEEEeCCCCCC-ceeEEEcCCC-CCceEEEEEEecCC--CEEEEE
Confidence            98 67899999999999998       7899999999999999998 9999999999 89999999999975  999999


Q ss_pred             EEEcCCCCeEEcccCcCcEEEeCCCCCcceEEEEEEEeCCCCeEEEEeeeeCCCCCC----CcEEecCccccc
Q 024895          176 VAQVGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSGYDGKWIWAKNVLPADWKP----GMIYNSGVQITD  244 (261)
Q Consensus       176 V~~~g~~~W~~m~r~~g~~W~~~~~~~gpl~~Rvt~Ts~~~G~~vv~~~vip~~~~~----g~~y~t~~QF~~  244 (261)
                      |+++  +.|++|+|+|+|+|..+..+.+||+|||  |+ .+|++|  .++||++|++    +.+|++++||++
T Consensus       143 i~~~--~~W~~m~r~~~n~~~~~~~~~~pls~rv--T~-~~G~~v--~~vip~~w~~~~~~~~~~~~~~Qf~~  208 (208)
T 3d30_A          143 YEKD--GKWINMEKMDYNHFVSTNLGTGSLKVRM--TD-IRGKVV--KDTIPKLPESGTSKAYTVPGHVQFPE  208 (208)
T ss_dssp             EEET--TEEEEEEECTTSCEEEECCCSSSEEEEE--EE-TTCCEE--EEEECCCCSSCCSSCEEEECCCCCCC
T ss_pred             EecC--CcEEEccccccceeecCCCCCCCEEEEE--EE-CCCCEE--EEEECCCCccCcccceEEeCcCccCC
Confidence            9986  4899999999999988777789999999  57 899999  7899999997    899999999985

>3ft1_A PHL P 3 allergen; beta-barrel; 1.79A {Phleum pratense} SCOP: b.7.3.0 PDB: 3ft9_A

Probab=99.96  E-value=3.8e-29  Score=194.05  Aligned_cols=96  Identities=24%  Similarity=0.476  Sum_probs=90.5

Q ss_pred             CcEEEEEecCCCCCceeEEEEEEecCccCeEEEEEEEcCCCCeEEcccCcCcEEEeCC--CCCcceEEEEEEEeCCCCeE
Q 024895          142 QNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSR--VPNGALQFRFVVTSGYDGKW  219 (261)
Q Consensus       142 ~ni~~~v~~gS~n~~w~av~v~n~gg~~~I~sVeV~~~g~~~W~~m~r~~g~~W~~~~--~~~gpl~~Rvt~Ts~~~G~~  219 (261)
                      .+|+|+|++|| ++||++|+|.|++|.++|.+|||+++++..|++|+| ||++|++++  ++++||+||||  + .+|++
T Consensus         2 ~~i~F~V~~gs-~~~~l~vlv~nv~G~gdI~~V~ik~s~t~~W~~M~r-wGa~W~~~s~~~l~GplSfRvt--~-~~G~~   76 (100)
T 3ft1_A            2 VQVTFTVQKGS-DPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTK-KGNVWEVKSSKPLVGPFNFRFM--S-KGGMR   76 (100)
T ss_dssp             BEEEEEECTTC-BTTEEEEEEEEECTTCCEEEEEEECTTCCCCEECEE-ETTEEEEECSSCCCSSEEEEEE--E-TTCCE
T ss_pred             CCEEEEEecCC-CcceEEEEEEEcCCCccEEEEEEEeCCCCCeEEecc-cCCEeEeCCCCCCCCCEEEEEE--E-cCCcE
Confidence            37999999998 899999999999999999999999988778999999 999999987  68999999995  5 78999


Q ss_pred             EEEeeeeCCCCCCCcEEecCccc
Q 024895          220 IWAKNVLPADWKPGMIYNSGVQI  242 (261)
Q Consensus       220 vv~~~vip~~~~~g~~y~t~~QF  242 (261)
                      +++.||||++|++|++|++.+||
T Consensus        77 ~v~~nViPa~W~~G~ty~s~vq~   99 (100)
T 3ft1_A           77 NVFDEVIPTAFSIGKTYKPEEQE   99 (100)
T ss_dssp             EEEEEEECTTCCTTCEECCCCBC
T ss_pred             EEECeEeCCCCCCCcEEeccccc
Confidence            99999999999999999999998

>1wc2_A Endoglucanase; hydrolase, cellulase, cellulose, double-PSI fold, glycoside hydrolase; 1.2A {Mytilus edulis} SCOP: b.52.1.1

Probab=99.95  E-value=1.2e-28  Score=207.58  Aligned_cols=109  Identities=15%  Similarity=0.323  Sum_probs=92.6

Q ss_pred             ceeeEEEEeCCCCCCCCCccCCC-----CCCCCCCCceEEEeChhccCCC------CCCCceEEEEeCCCC------ccc
Q 024895           22 VHQTKVAYFSQASALSSGACGYG-----SLALSFNGGHLAAGVPSLYKDG------AGCGACFQMRCKNPT------LCS   84 (261)
Q Consensus        22 ~~~g~aT~Y~~~~g~~~GaCGyg-----~~~~~~~~~~~aA~s~~~~~~g------~~CG~C~~V~c~~~~------~C~   84 (261)
                      |..++||||++.   .+|||||+     ++.+..++.++||||++||++|      +.||+||||+|.+..      +|.
T Consensus        14 ~~~A~aT~Yg~~---~gGACGyG~~~~~~l~~~gyg~~tAALStaLFn~G~~~w~G~~CG~Cyel~c~~~~c~~cg~~~~   90 (181)
T 1wc2_A           14 KSCASTTNYHDS---HKGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGGYVPGQGGPVR   90 (181)
T ss_dssp             EEEEEEEEECCC---BCTTTTCSCSSSSBCCSSGGGSCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEEEECTTSCCCCC
T ss_pred             ccccceeEecCC---CCcccCcCcCCCCCccccCCcceeeecCHHHhCCCccccccccCCCcEEEEcCCCCcccccccCC
Confidence            889999999997   69999999     5555566889999999999997      899999999997532      233


Q ss_pred             C-CCeEEEEccCCCC-------C--------------CCceecCHHHHHHhhcCCCCcccccccEEEEEEEEEeeccCC
Q 024895           85 G-RGTRVILTDLNHS-------N--------------QTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKN  141 (261)
Q Consensus        85 ~-~~v~V~VtD~Cp~-------~--------------~~~~DLs~~AF~~ia~~~~~~~l~~~G~v~v~~r~V~C~~~g  141 (261)
                      + ++|+|||||+||.       +              +.||||++.| .+|+.       ...|+++|+||||+|+..+
T Consensus        91 ~g~SI~VtaTN~CPpn~~nggWCn~pp~~~~~n~~G~~~HFDLs~pa-~~Ia~-------~~~GivpV~yrrV~C~~~~  161 (181)
T 1wc2_A           91 EGLSKTFMITNLCPNIYPNQDWCNQGSQYGGHNKYGYELHLDLENGR-SQVTG-------MGWNNPETTWEVVNCDSEH  161 (181)
T ss_dssp             TTCEEEEEEEEEECSSTTSTTTSCCSSSSSCCCTTSCSEEEEEECTT-STTGG-------GTCSSEEEEEEEECHHHHH
T ss_pred             CCCeEEEEEecCCCCCCCCCCccCCCcccCcccccCccccccccchH-HHhhh-------hcCCCceeEEEEEeCCCCC
Confidence            3 3699999999992       1              5799999999 88998       6789999999999999843

>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense}

Probab=99.94  E-value=6.2e-27  Score=183.61  Aligned_cols=96  Identities=23%  Similarity=0.486  Sum_probs=89.1

Q ss_pred             CCCcEEEEEecCCCCCceeEEEEEEecCccCeEEEEEEEcCCCCeEEcccCcCcEEEeCC--CCCcceEEEEEEEeCCCC
Q 024895          140 KNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSR--VPNGALQFRFVVTSGYDG  217 (261)
Q Consensus       140 ~g~ni~~~v~~gS~n~~w~av~v~n~gg~~~I~sVeV~~~g~~~W~~m~r~~g~~W~~~~--~~~gpl~~Rvt~Ts~~~G  217 (261)
                      .|.||.|+|+++| ++||++|+|.|++|.++|++|+|++.++..|++|+|+ |++|+++.  +|++||+||||  + .+|
T Consensus        11 ~g~~v~f~V~~~s-np~~l~VlV~nv~G~GdI~~V~Ik~~~~~~W~~M~rn-Ga~W~~~s~~~L~GplSfRvt--t-s~G   85 (108)
T 2jnz_A           11 SAVQVTFTVQKGS-DPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTKK-GNVWEVKSSKPLVGPFNFRFM--S-KGG   85 (108)
T ss_dssp             CCCEEEEEECTTC-CSSEEEEEEEEEBTTBCEEEEEEECTTCCCCEECEEE-TTEEEEECSSCCCSSEEEEEE--E-TTT
T ss_pred             CCccEEEEEecCC-CccEEEEEEEEeCCCCCEEEEEEEeCCCCcEeEcccc-CCEeEeCCCCCCCCCEEEEEE--E-cCC
Confidence            3579999999998 8999999999999999999999998667799999999 99999987  78999999995  5 789


Q ss_pred             eEEEEeeeeCCCCCCCcEEecCc
Q 024895          218 KWIWAKNVLPADWKPGMIYNSGV  240 (261)
Q Consensus       218 ~~vv~~~vip~~~~~g~~y~t~~  240 (261)
                      +++++.||||++|++|++|++.+
T Consensus        86 ~~~va~nViPa~W~~Gqty~s~v  108 (108)
T 2jnz_A           86 MRNVFDEVIPTAFSIGKTYKPEE  108 (108)
T ss_dssp             EEEEEEEEECSSCCTTCEECCCC
T ss_pred             cEEEECeEECCCCCCCCEEeCCC
Confidence            99999999999999999999864

>1bmw_A PHL P II, pollen allergen PHL P2; allergy, immunoglobulins, immunology,; NMR {Phleum pratense} SCOP: b.7.3.1 PDB: 1who_A 1whp_A 2vxq_A

Probab=99.92  E-value=5.2e-27  Score=180.89  Aligned_cols=93  Identities=28%  Similarity=0.514  Sum_probs=84.7

Q ss_pred             CcEEEEEecCCCCCceeEEEEEEecCccCeEEEEEEEcCCCCeEEcccCcCcEEEeCC--CCCcceEEEEEEEeCCCCeE
Q 024895          142 QNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSR--VPNGALQFRFVVTSGYDGKW  219 (261)
Q Consensus       142 ~ni~~~v~~gS~n~~w~av~v~n~gg~~~I~sVeV~~~g~~~W~~m~r~~g~~W~~~~--~~~gpl~~Rvt~Ts~~~G~~  219 (261)
                      .+|+|+|++|| ++||++|+|.|++  ++|++|||+++++..|++|+|+||++|+++.  +|+|||+||||  + .+|++
T Consensus         2 ~~i~F~V~~gs-~~~~l~vlv~nv~--gdI~~V~ik~~~~~~W~~M~r~wGa~W~~~~~~~L~GplSfRvt--~-~~G~~   75 (96)
T 1bmw_A            2 PKVTFTVEKGS-NEKHLAVLVKYEG--DTMAEVELREHGSDEWVAMTKGEGGVWTFDSEEPLQGPFNFRFL--T-EKGMK   75 (96)
T ss_dssp             CCCCCCCCTTC-SSSBCCBCCCCSS--SCCCCCEECCSSSSSCEECBCCSSSSBBCBCCSSCCCCCCBCCE--E-TTTEE
T ss_pred             CCEEEEEecCC-CCceEEEEEEEeC--CCEEEEEEEECCCCcEEECccCcCceeEeCCCCCCCCCEEEEEE--E-cCCcE
Confidence            37999999998 8999999999997  8999999998767899999999999999997  57899999995  5 78999


Q ss_pred             EEEeeeeCCCCCCCcEEecCc
Q 024895          220 IWAKNVLPADWKPGMIYNSGV  240 (261)
Q Consensus       220 vv~~~vip~~~~~g~~y~t~~  240 (261)
                      ++++||||++|++|++|++.+
T Consensus        76 ~v~~nViP~~W~~G~ty~~~~   96 (96)
T 1bmw_A           76 NVFDDVVPEKYTIGATYAPEE   96 (96)
T ss_dssp             CCBSSCSCSSCCSSSCCCC--
T ss_pred             EEEeeEeCCCCCCCCEEeCCC
Confidence            999999999999999998853

>1bw3_A Barwin, basic barley SEED protein; lectin; NMR {Hordeum vulgare} SCOP: b.52.1.2 PDB: 1bw4_A

Probab=99.63  E-value=1.3e-16  Score=127.71  Aligned_cols=92  Identities=17%  Similarity=0.252  Sum_probs=67.1

Q ss_pred             CCCccCCCCCCCCCC----CceEEEeChhcc-CCCCCCCceEEEEeCCCCcccCCCeEEEEccCCCCCCCceecC-HHHH
Q 024895           37 SSGACGYGSLALSFN----GGHLAAGVPSLY-KDGAGCGACFQMRCKNPTLCSGRGTRVILTDLNHSNQTDFVIS-SRAF  110 (261)
Q Consensus        37 ~~GaCGyg~~~~~~~----~~~~aA~s~~~~-~~g~~CG~C~~V~c~~~~~C~~~~v~V~VtD~Cp~~~~~~DLs-~~AF  110 (261)
                      ..++|+--+... +.    ...-.|+...+. +++..||+|++|++..    ++++|+|+|+|+||.  .+|||| +.||
T Consensus        27 ~s~~C~t~da~~-~~~~~~~y~wtA~~g~~gp~~g~~CG~cv~Vtn~~----nGksV~V~VvD~CP~--ggLDLS~~~AF   99 (125)
T 1bw3_A           27 VSAYCATWDASK-PLSWRSKYGWTAFCGPAGPRGQAACGKCLRVTNPA----TGAQITARIVDQCAN--GGLDLDWDTVF   99 (125)
T ss_dssp             TCCTTHHHHTTS-CHHHHHHSCCEESCSTTCCCSGGGTTCEEEEEETT----TTEEEEEEEEECCSS--SSCCSCSSSSH
T ss_pred             eeEeeecccCCC-ceeEecCCCceEeccCCCCCCCcccCCEEEeEeCC----CCCEEEEEEEEeCCC--CCCCCCCHHHH
Confidence            348898633222 11    011234444444 7789999999999854    256899999999997  459999 9999


Q ss_pred             HHhhcCCCCcccccccEEEEEEEEEeec
Q 024895          111 MALSNQGKGQDILKLGVVDVEYKRVPCE  138 (261)
Q Consensus       111 ~~ia~~~~~~~l~~~G~v~v~~r~V~C~  138 (261)
                      ++|+.++   +.++.|+++|+|++|+|+
T Consensus       100 ~~Ia~~g---~G~~~G~i~V~w~~V~C~  124 (125)
T 1bw3_A          100 TKIDTNG---IGYQQGHLNVNYQFVDCR  124 (125)
T ss_dssp             HHHCSSC---HHHHHSEEEEEEEEECCC
T ss_pred             HHHhccC---CcccCcEEEEEEEEEeCC
Confidence            9999843   114689999999999996

>4avr_A PA4485; unknown function, GRAM-negative bacteria, infectious disease structure-based inhibitor design; 1.08A {Pseudomonas aeruginosa PA01}

Probab=99.16  E-value=2e-10  Score=87.73  Aligned_cols=91  Identities=18%  Similarity=0.162  Sum_probs=71.3

Q ss_pred             eeeEEEEeCCC-CCCCCCccCCCCCCCCCCCceEEEeChhccCCCCCCCceEEEEeCCCCcccCCCeEEEEccCCCC-CC
Q 024895           23 HQTKVAYFSQA-SALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGRGTRVILTDLNHS-NQ  100 (261)
Q Consensus        23 ~~g~aT~Y~~~-~g~~~GaCGyg~~~~~~~~~~~aA~s~~~~~~g~~CG~C~~V~c~~~~~C~~~~v~V~VtD~Cp~-~~  100 (261)
                      ..|.|+||+.. .| ...|||=-..    ...++||-.+      ..||..++|+...    ++++|+|+|.|+||. +.
T Consensus         2 ~~G~ASwYg~~f~G-~~TA~Ge~~~----~~~~tAAH~t------lP~gt~vrVtNl~----nGksVvVrVnDRGP~~~g   66 (95)
T 4avr_A            2 DTGEASYYGSRHAG-LRTASGERYN----PNAMTAAHRT------LPFGARVRVTNLD----NRRSVVVRINDRGPFRRG   66 (95)
T ss_dssp             EEEEEEECCGGGTT-SBCTTSCBCC----TTSCEEECSS------SCTTCEEEEEETT----TCCEEEEEEEECCCCSTT
T ss_pred             CEEEEEEECCccCC-CCCCCccCcC----CCCCEEEcCC------CCCCcEEEEEECC----CCcEEEEEEccCCCCCCC
Confidence            47999999974 22 4688874321    1346777763      3799999999754    367899999999998 45


Q ss_pred             CceecCHHHHHHhhcCCCCcccccccEEEEEEEEE
Q 024895          101 TDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRV  135 (261)
Q Consensus       101 ~~~DLs~~AF~~ia~~~~~~~l~~~G~v~v~~r~V  135 (261)
                      ..||||..||++|+.       .+.|+.+|+|+.+
T Consensus        67 riIDLS~aAa~~Lg~-------~~~G~~~V~ve~~   94 (95)
T 4avr_A           67 RIIDVSRKAAEGLGM-------IRSGVAPVRIESL   94 (95)
T ss_dssp             EEEEECHHHHHHHTC-------TTTSCEEEEEEEC
T ss_pred             CEEEeCHHHHHHhCC-------cCCCEEEEEEEEe
Confidence            579999999999998       6899999999876

>3m3g_A EPL1 protein; fungal, plant defense, fungus, polysaccharide-binding protei; 1.39A {Hypocrea virens}

Probab=98.03  E-value=1.6e-05  Score=62.98  Aligned_cols=69  Identities=28%  Similarity=0.540  Sum_probs=53.8

Q ss_pred             eEEEeCh-hccCCCCCCCceEEEEeCCCCcccCCCeEEEEccCCCCCCCceecCHHHHHHhhcCCCCcccccccEEEEEE
Q 024895           54 HLAAGVP-SLYKDGAGCGACFQMRCKNPTLCSGRGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEY  132 (261)
Q Consensus        54 ~~aA~s~-~~~~~g~~CG~C~~V~c~~~~~C~~~~v~V~VtD~Cp~~~~~~DLs~~AF~~ia~~~~~~~l~~~G~v~v~~  132 (261)
                      +|.+... .-|+ ...||.|+||+-.      ++++.|+..|.-++   .|+|+.+||+.|.+ |++   ...|+|+++|
T Consensus        45 ~IGg~~~i~gwn-s~~CGtC~~lty~------g~si~vlaID~a~~---Gfnis~~A~n~LT~-G~a---~~lG~V~a~~  110 (120)
T 3m3g_A           45 YIGGAAAVAGWN-SASCGTCWKLQYS------GHTIYVLAVDHAAS---GFNIALDAMNALTG-GQA---VQLGRVSATA  110 (120)
T ss_dssp             SEEEETTCCSTT-CTTTTCEEEEEET------TEEEEEEEEEECSS---SEEECHHHHHHHHT-SCH---HHHCEEECEE
T ss_pred             ccccccccccCC-CCCCCceEEEEEC------CeEEEEEEEecCCC---ceeecHHHHHHhhC-Ccc---eeeeeEeEEE
Confidence            4666654 3454 4899999999973      46789999998755   69999999999986 322   2459999999


Q ss_pred             EEEe
Q 024895          133 KRVP  136 (261)
Q Consensus       133 r~V~  136 (261)
                      ++|+
T Consensus       111 ~~V~  114 (120)
T 3m3g_A          111 TQVP  114 (120)
T ss_dssp             EEEC
T ss_pred             EEcC
Confidence            9997

>2kqa_A Cerato-platanin; elicitor, secreted, toxin; NMR {Ceratocystis platani}

Probab=98.01  E-value=1.2e-05  Score=64.23  Aligned_cols=68  Identities=21%  Similarity=0.397  Sum_probs=55.8

Q ss_pred             eEEEeChh-ccCCCCCCCceEEEEeCCCCcccCCCeEEEEccCCCCCCCceecCHHHHHHhhcCCCCcccccccEE-EEE
Q 024895           54 HLAAGVPS-LYKDGAGCGACFQMRCKNPTLCSGRGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQDILKLGVV-DVE  131 (261)
Q Consensus        54 ~~aA~s~~-~~~~g~~CG~C~~V~c~~~~~C~~~~v~V~VtD~Cp~~~~~~DLs~~AF~~ia~~~~~~~l~~~G~v-~v~  131 (261)
                      +|.+.... -|+ ...||.|+||+-.     +++++.|+..|.-++   .|+++.+||+.|.+.      ...|+| +++
T Consensus        51 ~IGga~~iagWN-S~~CGtC~~lty~-----ng~sI~vlaID~A~~---gFnIs~~Amn~LT~G------~~lG~V~~a~  115 (129)
T 2kqa_A           51 NVGGIPDIAGWD-SPSCGTCWKVTIP-----NGNSIFIRGVDSGRG---GFNVNPTAFTKLVGS------TEAGRVDNVN  115 (129)
T ss_dssp             SEEEETTCCSTT-CTTCSCEEEEEET-----TTEEEEEEEEEECSS---SEEECHHHHHHHHSS------SSSCCBCSCE
T ss_pred             eeccchhhccCC-CCCCCceEEEEEc-----CCCEEEEEEEccCCC---ceeehHHHHHHhcCC------cccCcEeEEE
Confidence            46666654 466 7999999999973     156899999998775   799999999999983      357899 999


Q ss_pred             EEEEe
Q 024895          132 YKRVP  136 (261)
Q Consensus       132 ~r~V~  136 (261)
                      |++|+
T Consensus       116 ~~qV~  120 (129)
T 2kqa_A          116 YVQVD  120 (129)
T ss_dssp             EEECC
T ss_pred             EEEcC
Confidence            99996

>3sul_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.63A {Moniliophthora perniciosa}

Probab=97.98  E-value=2.3e-05  Score=62.21  Aligned_cols=71  Identities=25%  Similarity=0.471  Sum_probs=54.9

Q ss_pred             eEEEeCh-hccCCCCCCCceEEEEeCCCCcccCCCeEEEEccCCCCCCCceecCHHHHHHhhcCCCCcccccccEEEEEE
Q 024895           54 HLAAGVP-SLYKDGAGCGACFQMRCKNPTLCSGRGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEY  132 (261)
Q Consensus        54 ~~aA~s~-~~~~~g~~CG~C~~V~c~~~~~C~~~~v~V~VtD~Cp~~~~~~DLs~~AF~~ia~~~~~~~l~~~G~v~v~~  132 (261)
                      +|.+... .-|++ ..||.|+|++-..    .++++.|...|.-++   .|+|+.+||+.|.+. ++   ...|+|+++|
T Consensus        45 FIGg~~~V~gwnS-~~CGtC~~lty~~----~g~si~vlaID~a~~---Gfnis~~Amn~LT~G-~a---~~lG~V~a~~  112 (122)
T 3sul_A           45 YVGAVDTITGWNS-ESCGTCYQITWSG----TGKTIHVVGVDVAGN---GFNVGQRAMDDLTNG-QA---VALGNIDVTA  112 (122)
T ss_dssp             EEEEETTCCSTTC-TTTTCEEEEEETT----TTEEEEEEEEEECSS---SEEECHHHHHHHHTS-CH---HHHSEEEEEE
T ss_pred             ccccccccccCCC-CCCCceEEEEEcC----CCcEEEEEEEecCCC---ceeehHHHHHHhcCC-cc---eecceEeEEE
Confidence            4666655 44655 9999999999742    246788888998765   599999999999862 22   3469999999


Q ss_pred             EEEe
Q 024895          133 KRVP  136 (261)
Q Consensus       133 r~V~  136 (261)
                      ++|+
T Consensus       113 ~qV~  116 (122)
T 3sul_A          113 TLVD  116 (122)
T ss_dssp             EEEC
T ss_pred             EEcC
Confidence            9997

>3suj_A Cerato-platanin 1; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}

Probab=97.86  E-value=3.6e-05  Score=61.42  Aligned_cols=74  Identities=22%  Similarity=0.482  Sum_probs=54.2

Q ss_pred             eEEEeCh-hccCCCCCCCceEEEEeCCCCcccCCCeEEEEccCCCCCCCceecCHHHHHHhhcCCCCcccccccEEEEEE
Q 024895           54 HLAAGVP-SLYKDGAGCGACFQMRCKNPTLCSGRGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEY  132 (261)
Q Consensus        54 ~~aA~s~-~~~~~g~~CG~C~~V~c~~~~~C~~~~v~V~VtD~Cp~~~~~~DLs~~AF~~ia~~~~~~~l~~~G~v~v~~  132 (261)
                      +|.+... .-|++ ..||.|+|++-.++.- ..+++.|+..|.-++   .|+|+.+||+.|.+. ++   ...|+|+++|
T Consensus        45 ~IGg~~~i~gwns-~~CGtC~~lty~g~~~-~~~si~vlaID~a~~---Gfnis~~Amn~LT~g-~a---~~lG~V~~~~  115 (127)
T 3suj_A           45 CIGGSSDIAGYNS-PNCGSCYQLTYSSAHT-TPKSIYMVAIDRSAE---GFTASKQAMDDLTNK-RA---EELGTVNVDV  115 (127)
T ss_dssp             SEEEETTCCSTTC-TTTTCEEEEEECCSSS-CCEEEEEEEEEECSS---SEEECHHHHHHHHTS-CH---HHHSSEEEEE
T ss_pred             eeccccccccCCC-CCCCceEEEEECCCCC-cceEEEEEEEecCCC---ceeecHHHHHHhcCC-cc---ccceeEEEEE
Confidence            4666553 34544 8999999999754210 125688888898766   599999999999863 22   3458999999


Q ss_pred             EEEe
Q 024895          133 KRVP  136 (261)
Q Consensus       133 r~V~  136 (261)
                      ++|+
T Consensus       116 ~~V~  119 (127)
T 3suj_A          116 RKVD  119 (127)
T ss_dssp             EEEC
T ss_pred             EEeC
Confidence            9997

>3suk_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}

Probab=97.85  E-value=3.4e-05  Score=61.48  Aligned_cols=73  Identities=22%  Similarity=0.467  Sum_probs=54.7

Q ss_pred             eEEEeCh-hccCCCCCCCceEEEEeCCCCcccCCCeEEEEccCCCCCCCceecCHHHHHHhhcCCCCcccccccEEEEEE
Q 024895           54 HLAAGVP-SLYKDGAGCGACFQMRCKNPTLCSGRGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEY  132 (261)
Q Consensus        54 ~~aA~s~-~~~~~g~~CG~C~~V~c~~~~~C~~~~v~V~VtD~Cp~~~~~~DLs~~AF~~ia~~~~~~~l~~~G~v~v~~  132 (261)
                      +|.+... .-|++ ..||.|+|++-.++.  ..+++.|...|.-++   .|+|+.+||+.|.+. ++   ...|+|+++|
T Consensus        46 ~IGg~~~i~gwnS-~~CGtC~~lty~g~~--~~~si~vlaID~a~~---Gfnis~~Amn~LT~G-~a---~~lG~V~~~~  115 (125)
T 3suk_A           46 HIGASSDIGGFNS-PACGNCYTISFTFQG--VTRSINLVAIDHAGN---GFNVAQAAMDELTNG-NA---VALGTIDVQS  115 (125)
T ss_dssp             SEEEETTCCSTTC-TTTTCEEEEEEEETT--EEEEEEEEEEEECSS---SEEECHHHHHHHHTS-CH---HHHCEEEEEE
T ss_pred             eeccccccccCCC-CCCCeeEEEEEcCCC--cceEEEEEEEecCCC---ceeecHHHHHHhcCC-cc---cccceEeEEE
Confidence            4666655 34654 899999999975431  125688888898765   599999999999872 22   2459999999


Q ss_pred             EEEe
Q 024895          133 KRVP  136 (261)
Q Consensus       133 r~V~  136 (261)
                      ++|+
T Consensus       116 ~~V~  119 (125)
T 3suk_A          116 QQVA  119 (125)
T ss_dssp             EEEC
T ss_pred             EEcC
Confidence            9997

>3sum_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.87A {Moniliophthora perniciosa}

Probab=97.80  E-value=5.6e-05  Score=60.74  Aligned_cols=72  Identities=21%  Similarity=0.329  Sum_probs=53.6

Q ss_pred             eEEEeChhccCCCCCCCceEEEEeCCCCcccCCCeEEEEccCCCCCCCceecCHHHHHHhhcCCCCcccccccEEEE-EE
Q 024895           54 HLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGRGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQDILKLGVVDV-EY  132 (261)
Q Consensus        54 ~~aA~s~~~~~~g~~CG~C~~V~c~~~~~C~~~~v~V~VtD~Cp~~~~~~DLs~~AF~~ia~~~~~~~l~~~G~v~v-~~  132 (261)
                      +|.|..   | |...||.|+||+-.      ++++.|...|.-.+. .-|||+.+||+.|.....+.+-...|+|++ +|
T Consensus        49 ~igg~~---w-ns~~CGtCwkLtY~------G~sI~vlaID~a~~g-~~FnIs~~Amn~LT~G~~a~~a~elG~Vda~~~  117 (136)
T 3sum_A           49 HFVAAP---E-AQTECGSCWKLRYK------GNHAFVTVVDRVEEA-NLFVGGTDLVKNLTTFNGAPEGYDWGTAQLFSA  117 (136)
T ss_dssp             SEEECC---B-TTBCTTCEEEEEET------TEEEEEEEEECCCST-TEEEECHHHHHHHTCBTTBCHHHHHSEEECSEE
T ss_pred             cccccc---c-CCCCCCceEEEEEC------CeEEEEEEEecCCCc-ceEeehHHHHHHHhCCCccccceecceeeeeEE
Confidence            466665   5 55899999999974      467889989987541 129999999999987321111245799999 99


Q ss_pred             EEEe
Q 024895          133 KRVP  136 (261)
Q Consensus       133 r~V~  136 (261)
                      ++|+
T Consensus       118 ~qVd  121 (136)
T 3sum_A          118 YQVD  121 (136)
T ss_dssp             EEEC
T ss_pred             EEcC
Confidence            9997

>2eng_A Endoglucanase V; cellulose degradation, hydrolase (endoglucanase), glycosidase; 1.50A {Humicola insolens} SCOP: b.52.1.1 PDB: 3eng_A* 4eng_A* 1hd5_A 1oa7_A* 1oa9_A 1l8f_A

Probab=93.45  E-value=0.035  Score=47.51  Aligned_cols=48  Identities=19%  Similarity=0.323  Sum_probs=33.1

Q ss_pred             EEEeChhccCCC---CCCCceEEEEeCCCCcccCCCeEEEEccCCCC-CCCceecC
Q 024895           55 LAAGVPSLYKDG---AGCGACFQMRCKNPTLCSGRGTRVILTDLNHS-NQTDFVIS  106 (261)
Q Consensus        55 ~aA~s~~~~~~g---~~CG~C~~V~c~~~~~C~~~~v~V~VtD~Cp~-~~~~~DLs  106 (261)
                      +||.+   +.++   ..|++|||++=++. ...+|..+|+||+...+ ..+||||.
T Consensus        72 FaA~~---~~g~~e~~~Cc~C~~LtFt~~-~~~GKkmiVQ~TNtG~Dl~~n~FDl~  123 (210)
T 2eng_A           72 FAATS---IAGSNEAGWCCACYELTFTSG-PVAGKKMVVQSTSTGGDLGSNHFDLN  123 (210)
T ss_dssp             EEEEE---CTTCCHHHHTTCEEEEEECSG-GGTTCEEEEEEEEC-----CCEEEEE
T ss_pred             eeeee---ccCCccccccceeEEEEEcCC-CcCCCEEEEEEecccCCCCCCceeEe
Confidence            56655   3333   56999999997653 34577899999999987 77899984

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	261
d1n10a2	143	b.52.1.3 (A:1003-1145) Pollen allergen PHL P 1 N-t	3e-30
d1n10a1	95	b.7.3.1 (A:1146-1240) PHL P 1 C-terminal domain {T	3e-29
d1whoa_	94	b.7.3.1 (A:) PHL P 2 {Timothy grass (Phleum praten	3e-25
d1wc2a1	180	b.52.1.1 (A:1-180) Endoglucanase (CMCase) {Blue mu	4e-09

>d1n10a2 b.52.1.3 (A:1003-1145) Pollen allergen PHL P 1 N-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]} Length = 143

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Pollen allergen PHL P 1 N-terminal domain
domain: Pollen allergen PHL P 1 N-terminal domain
species: Timothy grass (Phleum pratense) [TaxId: 15957]

 Score =  108 bits (270), Expect = 3e-30
 Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 2/109 (1%)

Query: 34  SALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGRGTRVILT 93
              + GACGY  +      G    G   ++K G GCG+CF+++C  P  CSG    V +T
Sbjct: 33  PKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTKPEACSGEPVVVHIT 92

Query: 94  DLNH--SNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYK 140
           D N        F +S  AF A++ +G  Q +   G ++++++RV C+Y 
Sbjct: 93  DDNEEPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRVKCKYP 141

>d1n10a1 b.7.3.1 (A:1146-1240) PHL P 1 C-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]} Length = 95

class: All beta proteins
fold: C2 domain-like
superfamily: PHL pollen allergen
family: PHL pollen allergen
domain: PHL P 1 C-terminal domain
species: Timothy grass (Phleum pratense) [TaxId: 15957]

 Score =  104 bits (260), Expect = 3e-29
 Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 6/98 (6%)

Query: 143 NLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVW--DTSRV 200
            +   VE+ S  PNYLA+ V Y  G  ++VA+D+ + G   W  +  ++GA+W  DT   
Sbjct: 2   KVTFHVEKGS-NPNYLALLVKYVNGDGDVVAVDIKEKGKDKWIELKESWGAIWRIDTPDK 60

Query: 201 PNGALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYNS 238
             G    R+       G    A++V+P  WK    Y S
Sbjct: 61  LTGPFTVRYTTE---GGTKTEAEDVIPEGWKADTSYES 95

>d1whoa_ b.7.3.1 (A:) PHL P 2 {Timothy grass (Phleum pratense) [TaxId: 15957]} Length = 94

class: All beta proteins
fold: C2 domain-like
superfamily: PHL pollen allergen
family: PHL pollen allergen
domain: PHL P 2
species: Timothy grass (Phleum pratense) [TaxId: 15957]

 Score = 93.7 bits (233), Expect = 3e-25
 Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 4/93 (4%)

Query: 144 LAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNG 203
           +   VE+ S    +LAV V Y+G    M  +++ + GS  W  M++  G VW        
Sbjct: 4   VTFTVEKGS-NEKHLAVLVKYEGD--TMAEVELREHGSDEWVAMTKGEGGVWTFDSEEPL 60

Query: 204 ALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIY 236
              F F   +   G      +V+P  +  G  Y
Sbjct: 61  QGPFNFRFLTE-KGMKNVFDDVVPEKYTIGATY 92

>d1wc2a1 b.52.1.1 (A:1-180) Endoglucanase (CMCase) {Blue mussel (Mytilus edulis) [TaxId: 6550]} Length = 180

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Eng V-like
domain: Endoglucanase (CMCase)
species: Blue mussel (Mytilus edulis) [TaxId: 6550]

 Score = 52.7 bits (126), Expect = 4e-09
 Identities = 21/135 (15%), Positives = 39/135 (28%), Gaps = 31/135 (22%)

Query: 37  SSGACGYGSLALSF-----NGGHLAAGVPSLYKD------GAGCGACFQMRCKNPTLC-- 83
             GACG G  +         G  +AA     +        G  CG C ++      +   
Sbjct: 26  HKGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGGYVPGQ 85

Query: 84  -----SGRGTRVILTDL---NHSNQ-------TDFVISSRAFMA---LSNQGKGQDILKL 125
                 G     ++T+L    + NQ            +   +     L N       +  
Sbjct: 86  GGPVREGLSKTFMITNLCPNIYPNQDWCNQGSQYGGHNKYGYELHLDLENGRSQVTGMGW 145

Query: 126 GVVDVEYKRVPCEYK 140
              +  ++ V C+ +
Sbjct: 146 NNPETTWEVVNCDSE 160

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	261
d1n10a2	143	Pollen allergen PHL P 1 N-terminal domain {Timothy	100.0
d1wc2a1	180	Endoglucanase (CMCase) {Blue mussel (Mytilus eduli	99.96
d1n10a1	95	PHL P 1 C-terminal domain {Timothy grass (Phleum p	99.96
d1whoa_	94	PHL P 2 {Timothy grass (Phleum pratense) [TaxId: 1	99.94
d1bw3a_	125	Barwin {Barley (Hordeum vulgare) [TaxId: 4513]}	98.47
d2enga_	210	Endoglucanase V (Eng V) {Humicola insolens [TaxId:	91.0

>d1n10a2 b.52.1.3 (A:1003-1145) Pollen allergen PHL P 1 N-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Pollen allergen PHL P 1 N-terminal domain
domain: Pollen allergen PHL P 1 N-terminal domain
species: Timothy grass (Phleum pratense) [TaxId: 15957]

Probab=100.00  E-value=3.5e-38  Score=258.15  Aligned_cols=125  Identities=29%  Similarity=0.652  Sum_probs=110.6

Q ss_pred             ccCCCceeeEEEEeCCCCCC----CCCccCCCCCCCCCCCceEEEeChhccCCCCCCCceEEEEeCCCCcccCCCeEEEE
Q 024895           17 ACDRCVHQTKVAYFSQASAL----SSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGRGTRVIL   92 (261)
Q Consensus        17 ~~~~~~~~g~aT~Y~~~~g~----~~GaCGyg~~~~~~~~~~~aA~s~~~~~~g~~CG~C~~V~c~~~~~C~~~~v~V~V   92 (261)
                      ....+|++|+||||+++++.    .+|||||+++...+++.++||+|+.+|++|..||+||||+|.+++.|.+++|+|+|
T Consensus        12 ~~~~~w~~g~AT~Yg~~~~~~~~~~gGACGyg~~~~~p~g~~~aAls~~l~~~g~~CG~cyev~c~~~~~c~~~sv~V~v   91 (143)
T d1n10a2          12 TYGDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTKPEACSGEPVVVHI   91 (143)
T ss_dssp             BCCCSCEEEEEEEEC----------CCTTCCCCTTSTTTTTCEEEECHHHHGGGTTSSCEEEEEECSSTTBCSCCEEEEE
T ss_pred             ccCCCcEeeEEeEeCCCCCCCCCCCcccCCCCCcccCCCcceEEEeCHhHccCCCcCCcceEeEcCCCCcccCCCEEEEE
Confidence            44678999999999977643    47999999988888899999999999999999999999999998899989999999


Q ss_pred             ccCCCC--CCCceecCHHHHHHhhcCCCCcccccccEEEEEEEEEeeccCC
Q 024895           93 TDLNHS--NQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKN  141 (261)
Q Consensus        93 tD~Cp~--~~~~~DLs~~AF~~ia~~~~~~~l~~~G~v~v~~r~V~C~~~g  141 (261)
                      ||.||.  ++.|||||++||.+||+++.+.+|++.|+|+|+||||+|.++|
T Consensus        92 td~c~~~~~~~hfDLS~~AF~~iA~~~~~~~~~~~Giv~V~yRrV~C~~~g  142 (143)
T d1n10a2          92 TDDNEEPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRVKCKYPE  142 (143)
T ss_dssp             EEECSSCSSSSEEEEEHHHHHTTBSTTCHHHHHTTCSEEEEEEECCCCCCT
T ss_pred             EecccCCCCCccccCCHHHHhhhccccchhhheecCccceEEEEEeccCCC
Confidence            999986  6779999999999999988777888999999999999999986

>d1wc2a1 b.52.1.1 (A:1-180) Endoglucanase (CMCase) {Blue mussel (Mytilus edulis) [TaxId: 6550]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Eng V-like
domain: Endoglucanase (CMCase)
species: Blue mussel (Mytilus edulis) [TaxId: 6550]

Probab=99.96  E-value=1.9e-32  Score=229.99  Aligned_cols=122  Identities=17%  Similarity=0.356  Sum_probs=100.2

Q ss_pred             ceeeEEEEeCCCCCCCCCccCCCCCCCC-----CCCceEEEeChhccCC------CCCCCceEEEEeCCCCcc-------
Q 024895           22 VHQTKVAYFSQASALSSGACGYGSLALS-----FNGGHLAAGVPSLYKD------GAGCGACFQMRCKNPTLC-------   83 (261)
Q Consensus        22 ~~~g~aT~Y~~~~g~~~GaCGyg~~~~~-----~~~~~~aA~s~~~~~~------g~~CG~C~~V~c~~~~~C-------   83 (261)
                      |+.+++|||+++   .+|||||+++...     .++.++||+|++||++      |+.||+||||+|+++..|       
T Consensus        14 ~~~A~aT~Ygd~---~~GACGyG~~~~~~~~~~g~G~~tAAlS~~lf~~~~~~~~G~~CG~CyeV~C~~~~~~~~~~~~~   90 (180)
T d1wc2a1          14 KSCASTTNYHDS---HKGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGGYVPGQGGPVR   90 (180)
T ss_dssp             EEEEEEEEECCC---BCTTTTCSCSSSSBCCSSGGGSCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEEEECTTSCCCCC
T ss_pred             ccccceEEeCCC---CCCCCCCCcCCCCCccccCCcceEeeccHHHhcCCcccccccccCCEEEEEECCCCCCccCCCCC
Confidence            899999999987   5899999997442     2357999999999999      899999999999864322       


Q ss_pred             cCCCeEEEEccCCCC----------C-----------CCceecCHHHHHHhhcCCCCcccccccEEEEEEEEEeeccCCC
Q 024895           84 SGRGTRVILTDLNHS----------N-----------QTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQ  142 (261)
Q Consensus        84 ~~~~v~V~VtD~Cp~----------~-----------~~~~DLs~~AF~~ia~~~~~~~l~~~G~v~v~~r~V~C~~~g~  142 (261)
                      .+++|+|||||+||.          +           +.||||+ .||.+||.       ...|+|+|+||||+|+..+ 
T Consensus        91 ~g~sV~V~iTd~CP~n~~n~gWCn~p~~~~~~n~~g~~~HFDLs-~af~~ia~-------~~~G~v~V~yrrV~C~~~g-  161 (180)
T d1wc2a1          91 EGLSKTFMITNLCPNIYPNQDWCNQGSQYGGHNKYGYELHLDLE-NGRSQVTG-------MGWNNPETTWEVVNCDSEH-  161 (180)
T ss_dssp             TTCEEEEEEEEEECSSTTSTTTSCCSSSSSCCCTTSCSEEEEEE-CTTSTTGG-------GTCSSEEEEEEEECHHHHH-
T ss_pred             CCCcEEEEEEecCCCCCCCCCccCCccccccccccCcccceech-HHHHHHhh-------hcCCcceeEEEEeeCCCcc-
Confidence            234699999999994          1           1299997 59999999       7899999999999999997 


Q ss_pred             cEEEEEecCCCCCcee
Q 024895          143 NLAVRVEESSQKPNYL  158 (261)
Q Consensus       143 ni~~~v~~gS~n~~w~  158 (261)
                      ++++++.  + |++|-
T Consensus       162 ~~~~~~~--~-n~~~~  174 (180)
T d1wc2a1         162 NHDHRTP--S-NSMYG  174 (180)
T ss_dssp             HHCTTSC--C-HHHHT
T ss_pred             ccccccc--C-Ccchh
Confidence            8887655  2 45553

>d1n10a1 b.7.3.1 (A:1146-1240) PHL P 1 C-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]}

class: All beta proteins
fold: C2 domain-like
superfamily: PHL pollen allergen
family: PHL pollen allergen
domain: PHL P 1 C-terminal domain
species: Timothy grass (Phleum pratense) [TaxId: 15957]

Probab=99.96  E-value=3.4e-29  Score=191.14  Aligned_cols=92  Identities=33%  Similarity=0.668  Sum_probs=86.3

Q ss_pred             cEEEEEecCCCCCceeEEEEEEecCccCeEEEEEEEcCCCCeEEcccCcCcEEEeCCC--CCcceEEEEEEEeCCCCeEE
Q 024895          143 NLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRV--PNGALQFRFVVTSGYDGKWI  220 (261)
Q Consensus       143 ni~~~v~~gS~n~~w~av~v~n~gg~~~I~sVeV~~~g~~~W~~m~r~~g~~W~~~~~--~~gpl~~Rvt~Ts~~~G~~v  220 (261)
                      +|+|+|++|| |||||+|+|.|++|.++|.+|||++.+++.|++|+|+||++|+++++  +++||+|||  |+ .+|+++
T Consensus         2 ~i~F~v~~gs-np~~lav~v~n~~g~gdI~~vevk~~g~~~W~~m~r~~ga~W~~~~~~~~~gpls~Rv--t~-~~G~~~   77 (95)
T d1n10a1           2 KVTFHVEKGS-NPNYLALLVKYVNGDGDVVAVDIKEKGKDKWIELKESWGAIWRIDTPDKLTGPFTVRY--TT-EGGTKT   77 (95)
T ss_dssp             CCEEEECTTC-BTTEEEEEEECCCCSSCEEEEEEEETTCCCCEECBCCTTTCEEEECSSCCCSCEEEEE--EE-SSSCEE
T ss_pred             cEEEEECCCC-CcceEEEEEEEcCCCCcEEEEEEEeCCCCcceEEEECCCCeEEECCCCCCCcCEEEEE--EE-cCCCEE
Confidence            7999999999 89999999999999999999999999888999999999999998753  578999999  46 799999


Q ss_pred             EEeeeeCCCCCCCcEEec
Q 024895          221 WAKNVLPADWKPGMIYNS  238 (261)
Q Consensus       221 v~~~vip~~~~~g~~y~t  238 (261)
                      ++.||||++|++|++|++
T Consensus        78 v~~nViP~~W~~G~tY~s   95 (95)
T d1n10a1          78 EAEDVIPEGWKADTSYES   95 (95)
T ss_dssp             EEEEEECSSCCSSEEEEC
T ss_pred             EECceECCCCCCCCEEeC
Confidence            999999999999999985

>d1whoa_ b.7.3.1 (A:) PHL P 2 {Timothy grass (Phleum pratense) [TaxId: 15957]}

class: All beta proteins
fold: C2 domain-like
superfamily: PHL pollen allergen
family: PHL pollen allergen
domain: PHL P 2
species: Timothy grass (Phleum pratense) [TaxId: 15957]

Probab=99.94  E-value=1.2e-26  Score=176.60  Aligned_cols=89  Identities=29%  Similarity=0.535  Sum_probs=82.3

Q ss_pred             cEEEEEecCCCCCceeEEEEEEecCccCeEEEEEEEcCCCCeEEcccCcCcEEEeCC--CCCcceEEEEEEEeCCCCeEE
Q 024895          143 NLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSR--VPNGALQFRFVVTSGYDGKWI  220 (261)
Q Consensus       143 ni~~~v~~gS~n~~w~av~v~n~gg~~~I~sVeV~~~g~~~W~~m~r~~g~~W~~~~--~~~gpl~~Rvt~Ts~~~G~~v  220 (261)
                      .|+|+|++|| |||||+|+|.|++|  +|.+|||++.++++|++|+|+|||+|+++.  ++++||+|||  |+ .+|+++
T Consensus         3 ~v~f~v~~GS-np~~lav~v~~~gg--~i~~vev~~~gs~~W~~M~r~wGa~W~~~~~~~~~gplsfRv--t~-~~G~~~   76 (94)
T d1whoa_           3 KVTFTVEKGS-NEKHLAVLVKYEGD--TMAEVELREHGSDEWVAMTKGEGGVWTFDSEEPLQGPFNFRF--LT-EKGMKN   76 (94)
T ss_dssp             SEEEEECTTC-BTTEEEEEEEETTC--CEEEEEEECTTCCCCEECEECSTTEEEEECSSCCCSSEEEEE--EE-TTSCEE
T ss_pred             cEEEEECCCC-CccEEEEEEEEcCC--CEEEEEEEECCCCceeECccCcCccEEECCCCCCCccEEEEE--EE-cCCCEE
Confidence            6999999999 89999999999975  899999999888899999999999998875  4688999999  46 799999


Q ss_pred             EEeeeeCCCCCCCcEEe
Q 024895          221 WAKNVLPADWKPGMIYN  237 (261)
Q Consensus       221 v~~~vip~~~~~g~~y~  237 (261)
                      ++.||||++|++|++|+
T Consensus        77 v~~nViP~~W~~G~ty~   93 (94)
T d1whoa_          77 VFDDVVPEKYTIGATYA   93 (94)
T ss_dssp             EEEEEECSSCCTTCEEC
T ss_pred             EEcceECCCCCCCCEEC
Confidence            99999999999999996

>d1bw3a_ b.52.1.2 (A:) Barwin {Barley (Hordeum vulgare) [TaxId: 4513]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Barwin
domain: Barwin
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=98.47  E-value=4.1e-08  Score=74.50  Aligned_cols=64  Identities=22%  Similarity=0.510  Sum_probs=52.2

Q ss_pred             CCCCCceEEEEeCCCCcccCCCeEEEEccCCCCCCCceecC-HHHHHHhhcCCCCcccccccEEEEEEEEEeec
Q 024895           66 GAGCGACFQMRCKNPTLCSGRGTRVILTDLNHSNQTDFVIS-SRAFMALSNQGKGQDILKLGVVDVEYKRVPCE  138 (261)
Q Consensus        66 g~~CG~C~~V~c~~~~~C~~~~v~V~VtD~Cp~~~~~~DLs-~~AF~~ia~~~~~~~l~~~G~v~v~~r~V~C~  138 (261)
                      -..||+|++|+-+.    ++.+++++|+|+|..  +.|||. +..|++|...|.+   ...|.+.|.|++|.|.
T Consensus        60 q~sCGkclrvTN~a----tga~~~~RiVDqCsn--gGlDLD~~~vFn~iDtdG~G---~~~Ghl~V~y~fV~C~  124 (125)
T d1bw3a_          60 QAACGKCLRVTNPA----TGAQITARIVDQCAN--GGLDLDWDTVFTKIDTNGIG---YQQGHLNVNYQFVDCR  124 (125)
T ss_dssp             GGGTTCEEEEEETT----TTEEEEEEEEECCSS--SSCCSCSSSSHHHHCSSCHH---HHHSEEEEEEEEECCC
T ss_pred             cccccceEEeeecc----cCcEEEEEEeecccC--CCCccccHhhhheecCCCcc---cccccEEEEEEEecCC
Confidence            36899999999654    245699999999987  488998 6799999764433   5679999999999995

>d2enga_ b.52.1.1 (A:) Endoglucanase V (Eng V) {Humicola insolens [TaxId: 34413]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Eng V-like
domain: Endoglucanase V (Eng V)
species: Humicola insolens [TaxId: 34413]

Probab=91.00  E-value=0.044  Score=44.74  Aligned_cols=51  Identities=18%  Similarity=0.299  Sum_probs=31.8

Q ss_pred             EEEeChhccCCCCCCCceEEEEeCCCCcccCCCeEEEEccCCCC-CCCceecC
Q 024895           55 LAAGVPSLYKDGAGCGACFQMRCKNPTLCSGRGTRVILTDLNHS-NQTDFVIS  106 (261)
Q Consensus        55 ~aA~s~~~~~~g~~CG~C~~V~c~~~~~C~~~~v~V~VtD~Cp~-~~~~~DLs  106 (261)
                      +||.+-.-...+..|.+|||++=+... =.+|..+|+||+.--+ ..+||||.
T Consensus        72 fAA~~~~g~~e~~~Cc~Cy~LtFTs~~-~~GKkMiVQ~tNTGgDlg~n~FDl~  123 (210)
T d2enga_          72 FAATSIAGSNEAGWCCACYELTFTSGP-VAGKKMVVQSTSTGGDLGSNHFDLN  123 (210)
T ss_dssp             EEEEECTTCCHHHHTTCEEEEEECSGG-GTTCEEEEEEEEC-----CCEEEEE
T ss_pred             eeeeeecCCCccccccccEEEEeecCC-cCCCEEEEEEeccCCccCCCeeeEe
Confidence            555543222223569999999976421 2356799999988766 77899974