Citrus Sinensis ID: 024903

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260
MEKYGIHLLALSHVYSVPQLKQRCTKGLGERLTIDNVVDVLQLARLCDAPDLYLRCMKLAASRFKAVEKTEGWKFLQDHDPWLELQILQFMDEAESRIKRTRRRRQEQGLYLQLSEAMECLEHICTEGCTSVGPYEVGPTKNRGPCSKFATCQGLQLLIRHFATCKKRVNGGCLRCKRMWQLLRLHSSMCEQSDSCRVPLCRQFKLKAQLEKKGDDGRWRLLVKKVVSAKTISSLSQQKRKRMEESRGTMGDYSIRSFKL
cHHHHHHHHHHccccccHHHHHHHHHHHHccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccccccccccHHccccccccccccccc
ccHHHHHHHHHHHHHcHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccHHHHHHHcccHHHHHHHHHHHHcccccHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHccccccccccccccccccEEcc
MEKYGIHLLALShvysvpqlkqrctkglgerltiDNVVDVLQLarlcdapdLYLRCMKLAASRFKAVEKTEGwkflqdhdpwLELQILQFMDEAESRIKRTRRRRQEQGLYLQLSEAMECLEHIctegctsvgpyevgptknrgpcskfatcQGLQLLIRHFATCKkrvnggclrcKRMWQLLRLHssmceqsdscrvplcRQFKLKAQLEKKGDDGRWRLLVKKVVSAKTISSLSQQKRKRMEesrgtmgdysirsfkl
MEKYGIHLLALshvysvpqLKQRCTKGLGERLTIDNVVDVLQLARLCDAPDLYLRCMKLAASRFKAVEKTEGWKFLQDHDPWLELQILQFMDEAESRIKRTRRRRQEQGLYLQLSEAMECLEHICTEGCTSVGPYEVGPTKNRGPCSKFATCQGLQLLIRHFATCKKRVNGGCLRCKRMWQLLRLHSSMCEQSDSCRVPLCRQFKLKAqlekkgddgrwrLLVKKvvsaktisslsqqkrkrmeesrgtmgdysirsfkl
MEKYGIHLLALSHVYSVPQLKQRCTKGLGERLTIDNVVDVLQLARLCDAPDLYLRCMKLAASRFKAVEKTEGWKFLQDHDPWLELQILQFMDEAESrikrtrrrrQEQGLYLQLSEAMECLEHICTEGCTSVGPYEVGPTKNRGPCSKFATCQGLQLLIRHFATCKKRVNGGCLRCKRMWQLLRLHSSMCEQSDSCRVPLCRQFKLKAQLEKKGDDGRWRLLVKKVVSAKTISSLSQQKRKRMEESRGTMGDYSIRSFKL
***YGIHLLALSHVYSVPQLKQRCTKGLGERLTIDNVVDVLQLARLCDAPDLYLRCMKLAASRFKAVEKTEGWKFLQDHDPWLELQILQFMDE***************GLYLQLSEAMECLEHICTEGCTSVGPYEVGPTKNRGPCSKFATCQGLQLLIRHFATCKKRVNGGCLRCKRMWQLLRLHSSMCEQSDSCRVPLCRQFKLKAQLEKKGDDGRWRLLVKKVVSA*******************************
*EKYGIHLLALSHVYSVPQLKQRCTKGLGERLTIDNVVDVLQLARLCDAPDLYLRCMKLAASRFKAVEKTEGWKFLQDHDPWLELQILQFMDEAESRI*****************EAMECLEHICTEGCTSVGPYE********PCSKFATCQGLQLLIRHFATCKKRVNGGCLRCKRMWQLLRLHSSMCEQSDSCRVPLCR**********************************************************
MEKYGIHLLALSHVYSVPQLKQRCTKGLGERLTIDNVVDVLQLARLCDAPDLYLRCMKLAASRFKAVEKTEGWKFLQDHDPWLELQILQFMDEAESRIKRTRRRRQEQGLYLQLSEAMECLEHICTEGCTSVGPYEVGPTKNRGPCSKFATCQGLQLLIRHFATCKKRVNGGCLRCKRMWQLLRLHSSMCEQSDSCRVPLCRQFKLKAQLEKKGDDGRWRLLVKKVVSAK********************GDYSIRSFKL
*EKYGIHLLALSHVYSVPQLKQRCTKGLGERLTIDNVVDVLQLARLCDAPDLYLRCMKLAASRFKAVEKTEGWKFLQDHDPWLELQILQFMDEAE*********RQEQGLYLQLSEAMECLEHICTEGCTSVGPYEVGPTKNRGPCSKFATCQGLQLLIRHFATCKKRVNGGCLRCKRMWQLLRLHSSMCEQSDSCRVPLCRQFKLKAQLEKKGDDGRWRLLVKKVVSAKTIS***************************
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MEKYGIHLLALSHVYSVPQLKQRCTKGLGERLTIDNVVDVLQLARLCDAPDLYLRCMKLAASRFKAVEKTEGWKFLQDHDPWLELQILQFMDEAESRIKRTRRRRQEQGLYLQLSEAMECLEHICTEGCTSVGPYEVGPTKNRGPCSKFATCQGLQLLIRHFATCKKRVNGGCLRCKRMWQLLRLHSSMCEQSDSCRVPLCRQFKLKAQLEKKGDDGRWRLLVKKVVSAKTISSLSQQKRKRMEESRGTMGDYSIRSFKL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query260 2.2.26 [Sep-21-2011]
Q9FMK7365 BTB/POZ and TAZ domain-co yes no 0.892 0.635 0.698 2e-90
Q94BN0364 BTB/POZ and TAZ domain-co no no 0.957 0.684 0.647 3e-90
Q9FJX5372 BTB/POZ and TAZ domain-co no no 0.884 0.618 0.478 1e-54
Q6EJ98368 BTB/POZ and TAZ domain-co no no 0.873 0.616 0.440 1e-50
Q9SYL0364 BTB/POZ and TAZ domain-co no no 0.876 0.626 0.443 4e-48
Q9C5X91697 Histone acetyltransferase no no 0.303 0.046 0.375 2e-09
Q9FWQ51706 Histone acetyltransferase no no 0.369 0.056 0.339 4e-09
Q6YXY21668 Probable histone acetyltr no no 0.315 0.049 0.369 4e-09
Q9LE421670 Histone acetyltransferase no no 0.330 0.051 0.354 4e-08
Q6JHU9 2442 CREB-binding protein OS=R yes no 0.507 0.054 0.209 7e-06
>sp|Q9FMK7|BT1_ARATH BTB/POZ and TAZ domain-containing protein 1 OS=Arabidopsis thaliana GN=BT1 PE=1 SV=1 Back     alignment and function desciption
 Score =  332 bits (850), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 167/239 (69%), Positives = 199/239 (83%), Gaps = 7/239 (2%)

Query: 1   MEKYGIHLLALSHVYSVPQLKQRCTKGLGERLTIDNVVDVLQLARLCDAPDLYLRCMKLA 60
           MEKYGIHLLALSHVY V QLKQRCTKG+GER+T +NVVD+LQLARLCDAPDL L+CM+  
Sbjct: 97  MEKYGIHLLALSHVYMVTQLKQRCTKGVGERVTAENVVDILQLARLCDAPDLCLKCMRFI 156

Query: 61  ASRFKAVEKTEGWKFLQDHDPWLELQILQFMDEAESRIKRTRRRRQEQGLYLQLSEAMEC 120
             +FK VE+TEGWKFLQ+HDP+LEL ILQF+D+AESR KR RR R+EQ LYLQLSEAMEC
Sbjct: 157 HYKFKTVEQTEGWKFLQEHDPFLELDILQFIDDAESRKKRRRRHRREQNLYLQLSEAMEC 216

Query: 121 LEHICTEGCTSVGPYEVGPTKNR-----GPCSKFATCQGLQLLIRHFATCKKRVNG-GCL 174
           +EHICTEGCT VGP      K+      GPCS F+TC GLQLLIRHFA CKKRV+G GC+
Sbjct: 217 IEHICTEGCTLVGPSSNLDNKSTCQAKPGPCSAFSTCYGLQLLIRHFAVCKKRVDGKGCV 276

Query: 175 RCKRMWQLLRLHSSMCEQSDSCRVPLCRQFKLKAQLEKK-GDDGRWRLLVKKVVSAKTI 232
           RCKRM QLLRLHSS+C+QS+SCRVPLCRQ+K + + +KK  +D +W++LV++V SAK +
Sbjct: 277 RCKRMIQLLRLHSSICDQSESCRVPLCRQYKNRGEKDKKMVEDTKWKVLVRRVASAKAM 335
May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Also targeted for degradation by the 26S proteasome pathway. May be involved in gametophyte development.
Arabidopsis thaliana (taxid: 3702)
>sp|Q94BN0|BT2_ARATH BTB/POZ and TAZ domain-containing protein 2 OS=Arabidopsis thaliana GN=BT2 PE=1 SV=1 Back     alignment and function description
>sp|Q9FJX5|BT4_ARATH BTB/POZ and TAZ domain-containing protein 4 OS=Arabidopsis thaliana GN=BT4 PE=1 SV=1 Back     alignment and function description
>sp|Q6EJ98|BT5_ARATH BTB/POZ and TAZ domain-containing protein 5 OS=Arabidopsis thaliana GN=BT5 PE=1 SV=1 Back     alignment and function description
>sp|Q9SYL0|BT3_ARATH BTB/POZ and TAZ domain-containing protein 3 OS=Arabidopsis thaliana GN=BT3 PE=1 SV=2 Back     alignment and function description
>sp|Q9C5X9|HAC1_ARATH Histone acetyltransferase HAC1 OS=Arabidopsis thaliana GN=HAC1 PE=1 SV=2 Back     alignment and function description
>sp|Q9FWQ5|HAC12_ARATH Histone acetyltransferase HAC12 OS=Arabidopsis thaliana GN=HAC12 PE=2 SV=2 Back     alignment and function description
>sp|Q6YXY2|HACL1_ORYSJ Probable histone acetyltransferase HAC-like 1 OS=Oryza sativa subsp. japonica GN=Os02g0137500 PE=3 SV=2 Back     alignment and function description
>sp|Q9LE42|HAC5_ARATH Histone acetyltransferase HAC5 OS=Arabidopsis thaliana GN=HAC5 PE=2 SV=1 Back     alignment and function description
>sp|Q6JHU9|CBP_RAT CREB-binding protein OS=Rattus norvegicus GN=Crebbp PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query260
255540423 363 protein binding protein, putative [Ricin 1.0 0.716 0.753 1e-115
224136001344 predicted protein [Populus trichocarpa] 0.996 0.752 0.734 1e-110
224121870 364 predicted protein [Populus trichocarpa] 0.992 0.708 0.711 1e-107
225456816351 PREDICTED: BTB/POZ and TAZ domain-contai 1.0 0.740 0.754 1e-104
297733653347 unnamed protein product [Vitis vinifera] 1.0 0.749 0.754 1e-104
357477211 362 Speckle-type POZ protein [Medicago trunc 0.992 0.712 0.702 1e-103
356563157346 PREDICTED: BTB/POZ and TAZ domain-contai 1.0 0.751 0.689 1e-103
357477213292 Speckle-type POZ protein [Medicago trunc 0.992 0.883 0.702 1e-102
255645725351 unknown [Glycine max] 1.0 0.740 0.679 1e-101
283132373345 BTB/POZ domain-containing protein [Lotus 1.0 0.753 0.673 6e-99
>gi|255540423|ref|XP_002511276.1| protein binding protein, putative [Ricinus communis] gi|223550391|gb|EEF51878.1| protein binding protein, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 196/260 (75%), Positives = 229/260 (88%)

Query: 1   MEKYGIHLLALSHVYSVPQLKQRCTKGLGERLTIDNVVDVLQLARLCDAPDLYLRCMKLA 60
           +EK+GIHLLALSHVY VPQLKQRC K +G+RLT+DNVVDVLQLARLCDAPDLYL+CMKL 
Sbjct: 104 LEKFGIHLLALSHVYLVPQLKQRCAKDVGQRLTVDNVVDVLQLARLCDAPDLYLKCMKLI 163

Query: 61  ASRFKAVEKTEGWKFLQDHDPWLELQILQFMDEAESRIKRTRRRRQEQGLYLQLSEAMEC 120
            + FK+VEKTEGW+F+Q+HDP+LE +ILQF+DEAE R KRTRR RQEQ LY++L  AM+C
Sbjct: 164 TNHFKSVEKTEGWEFMQNHDPFLEYEILQFIDEAELRKKRTRRHRQEQSLYMELGVAMDC 223

Query: 121 LEHICTEGCTSVGPYEVGPTKNRGPCSKFATCQGLQLLIRHFATCKKRVNGGCLRCKRMW 180
           LEHICTEGCTSVGPY+V PTK R PC+KF+TCQGLQLLI+HFATCK RVNGGC RCKRMW
Sbjct: 224 LEHICTEGCTSVGPYDVQPTKKRVPCNKFSTCQGLQLLIKHFATCKNRVNGGCSRCKRMW 283

Query: 181 QLLRLHSSMCEQSDSCRVPLCRQFKLKAQLEKKGDDGRWRLLVKKVVSAKTISSLSQQKR 240
           QLLRLH+SMC+Q DSCRVPLCRQFKLK Q EKKGDD  W+LLV+KVVSA+ +SSLS  KR
Sbjct: 284 QLLRLHASMCDQPDSCRVPLCRQFKLKMQHEKKGDDALWKLLVRKVVSARVLSSLSLPKR 343

Query: 241 KRMEESRGTMGDYSIRSFKL 260
           KR E+ + T+ D+ IR+F+L
Sbjct: 344 KREEQLKETIHDHGIRTFRL 363

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224136001|ref|XP_002322214.1| predicted protein [Populus trichocarpa] gi|222869210|gb|EEF06341.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224121870|ref|XP_002318693.1| predicted protein [Populus trichocarpa] gi|222859366|gb|EEE96913.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225456816|ref|XP_002278192.1| PREDICTED: BTB/POZ and TAZ domain-containing protein 1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297733653|emb|CBI14900.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|357477211|ref|XP_003608891.1| Speckle-type POZ protein [Medicago truncatula] gi|355509946|gb|AES91088.1| Speckle-type POZ protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|356563157|ref|XP_003549831.1| PREDICTED: BTB/POZ and TAZ domain-containing protein 2-like [Glycine max] Back     alignment and taxonomy information
>gi|357477213|ref|XP_003608892.1| Speckle-type POZ protein [Medicago truncatula] gi|355509947|gb|AES91089.1| Speckle-type POZ protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|255645725|gb|ACU23356.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|283132373|dbj|BAI63592.1| BTB/POZ domain-containing protein [Lotus japonicus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query260
TAIR|locus:2161962365 BT1 "BTB and TAZ domain protei 0.938 0.668 0.673 1.2e-88
TAIR|locus:2101135364 BT2 "BTB and TAZ domain protei 0.953 0.681 0.626 2.7e-84
TAIR|locus:2031993364 BT3 "BTB and TAZ domain protei 0.873 0.623 0.432 9.5e-50
TAIR|locus:2120056368 BT5 "BTB and TAZ domain protei 0.869 0.614 0.434 6e-48
TAIR|locus:20156761706 HAC12 "histone acetyltransfera 0.323 0.049 0.364 6.9e-09
TAIR|locus:20892851670 HAC5 "histone acetyltransferas 0.292 0.045 0.375 1.5e-07
TAIR|locus:2079384465 BPM4 "BTB-POZ and MATH domain 0.315 0.176 0.317 1.2e-05
FB|FBgn0261617 3276 nej "nejire" [Drosophila melan 0.307 0.024 0.296 8.5e-05
WB|WBGene00000366 2017 cbp-1 [Caenorhabditis elegans 0.3 0.038 0.287 8.6e-05
UNIPROTKB|E2RBY3 2194 EP300 "Uncharacterized protein 0.346 0.041 0.298 0.00016
TAIR|locus:2161962 BT1 "BTB and TAZ domain protein 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 885 (316.6 bits), Expect = 1.2e-88, P = 1.2e-88
 Identities = 169/251 (67%), Positives = 203/251 (80%)

Query:     1 MEKYGIHLLALSHVYSVPQLKQRCTKGLGERLTIDNVVDVLQLARLCDAPDLYLRCMKLA 60
             MEKYGIHLLALSHVY V QLKQRCTKG+GER+T +NVVD+LQLARLCDAPDL L+CM+  
Sbjct:    97 MEKYGIHLLALSHVYMVTQLKQRCTKGVGERVTAENVVDILQLARLCDAPDLCLKCMRFI 156

Query:    61 ASRFKAVEKTEGWKFLQDHDPWLELQILQFMDEAESXXXXXXXXXQEQGLYLQLSEAMEC 120
               +FK VE+TEGWKFLQ+HDP+LEL ILQF+D+AES         +EQ LYLQLSEAMEC
Sbjct:   157 HYKFKTVEQTEGWKFLQEHDPFLELDILQFIDDAESRKKRRRRHRREQNLYLQLSEAMEC 216

Query:   121 LEHICTEGCTSVGPYEVGPTKNR-----GPCSKFATCQGLQLLIRHFATCKKRVNG-GCL 174
             +EHICTEGCT VGP      K+      GPCS F+TC GLQLLIRHFA CKKRV+G GC+
Sbjct:   217 IEHICTEGCTLVGPSSNLDNKSTCQAKPGPCSAFSTCYGLQLLIRHFAVCKKRVDGKGCV 276

Query:   175 RCKRMWQLLRLHSSMCEQSDSCRVPLCRQFKLKAQLEKKG-DDGRWRLLVKKVVSAKTIS 233
             RCKRM QLLRLHSS+C+QS+SCRVPLCRQ+K + + +KK  +D +W++LV++V SAK +S
Sbjct:   277 RCKRMIQLLRLHSSICDQSESCRVPLCRQYKNRGEKDKKMVEDTKWKVLVRRVASAKAMS 336

Query:   234 SLSQQKRKRME 244
             SLSQ K+K+ E
Sbjct:   337 SLSQSKKKKSE 347
GO:0003712 "transcription cofactor activity" evidence=IEA
GO:0004402 "histone acetyltransferase activity" evidence=IEA
GO:0005634 "nucleus" evidence=IEA;IDA
GO:0005737 "cytoplasm" evidence=ISM;IDA
GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS
GO:0008270 "zinc ion binding" evidence=IEA
GO:0005515 "protein binding" evidence=IPI
GO:0005516 "calmodulin binding" evidence=IDA
GO:0009751 "response to salicylic acid stimulus" evidence=IEP
GO:0042542 "response to hydrogen peroxide" evidence=IEP
GO:0009553 "embryo sac development" evidence=IGI
GO:0009555 "pollen development" evidence=IGI
GO:0009733 "response to auxin stimulus" evidence=IEP
TAIR|locus:2101135 BT2 "BTB and TAZ domain protein 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031993 BT3 "BTB and TAZ domain protein 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2120056 BT5 "BTB and TAZ domain protein 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2015676 HAC12 "histone acetyltransferase of the CBP family 12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2089285 HAC5 "histone acetyltransferase of the CBP family 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2079384 BPM4 "BTB-POZ and MATH domain 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
FB|FBgn0261617 nej "nejire" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
WB|WBGene00000366 cbp-1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|E2RBY3 EP300 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FMK7BT1_ARATHNo assigned EC number0.69870.89230.6356yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pg.C_LG_XV000621
hypothetical protein (344 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query260
smart0055179 smart00551, ZnF_TAZ, TAZ zinc finger, present in p 8e-10
pfam0213574 pfam02135, zf-TAZ, TAZ zinc finger 3e-06
>gnl|CDD|214717 smart00551, ZnF_TAZ, TAZ zinc finger, present in p300 and CBP Back     alignment and domain information 
 Score = 53.9 bits (130), Expect = 8e-10
 Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 20/94 (21%)

Query: 111 YLQLSEAMECLEHICTEGCTSVGPYEVGPTKNRGPCSKFATCQGLQLLIRHFATCKKR-- 168
           Y QL   +E L H     C +           R    ++  C+ ++ L+RH  +CK R  
Sbjct: 4   YKQLQRWLELLVHARR--CKA-----------REAKCQYPNCKTMKKLLRHMDSCKVRKC 50

Query: 169 VNGGCLRCKRMWQLLRLHSSMCEQSDSCRVPLCR 202
             G C  CK++WQ    HS  C +  +C V  C 
Sbjct: 51  KYGYCASCKQLWQ----HSKHC-KDSNCPVCKCV 79

Length = 79
>gnl|CDD|216893 pfam02135, zf-TAZ, TAZ zinc finger Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 260
KOG1778319 consensus CREB binding protein/P300 and related TA 100.0
smart0055179 ZnF_TAZ TAZ zinc finger, present in p300 and CBP. 99.88
PHA02790 480 Kelch-like protein; Provisional 99.58
PF0213575 zf-TAZ: TAZ zinc finger; InterPro: IPR000197 Zinc 99.52
PHA03098 534 kelch-like protein; Provisional 99.51
PHA02713 557 hypothetical protein; Provisional 99.49
KOG4441 571 consensus Proteins containing BTB/POZ and Kelch do 99.45
KOG4350 620 consensus Uncharacterized conserved protein, conta 98.37
KOG0783 1267 consensus Uncharacterized conserved protein, conta 98.27
PF07707103 BACK: BTB And C-terminal Kelch; InterPro: IPR01170 98.15
KOG4591280 consensus Uncharacterized conserved protein, conta 98.1
KOG4682488 consensus Uncharacterized conserved protein, conta 97.87
smart00875101 BACK BTB And C-terminal Kelch. The BACK domain is 97.82
KOG2075521 consensus Topoisomerase TOP1-interacting protein B 97.47
KOG1987297 consensus Speckle-type POZ protein SPOP and relate 96.39
PF0213575 zf-TAZ: TAZ zinc finger; InterPro: IPR000197 Zinc 94.94
smart0055179 ZnF_TAZ TAZ zinc finger, present in p300 and CBP. 93.15
PF0146678 Skp1: Skp1 family, dimerisation domain; InterPro: 92.18
KOG2075 521 consensus Topoisomerase TOP1-interacting protein B 89.34
PF11822317 DUF3342: Domain of unknown function (DUF3342); Int 88.5
PF00651111 BTB: BTB/POZ domain; InterPro: IPR013069 The BTB ( 87.33
KOG0511516 consensus Ankyrin repeat protein [General function 81.03
>KOG1778 consensus CREB binding protein/P300 and related TAZ Zn-finger proteins [Transcription] Back     alignment and domain information 
Probab=100.00  E-value=8.7e-36  Score=276.69  Aligned_cols=223  Identities=42%  Similarity=0.672  Sum_probs=200.3

Q ss_pred             ChhHHHHHHHhhhccCchhHHHHHHHHHhh-cCCcccHHHHHHHHhhCCChHHHHHHHHHHHHhhhhhhcchhhhHhhhc
Q 024903            1 MEKYGIHLLALSHVYSVPQLKQRCTKGLGE-RLTIDNVVDVLQLARLCDAPDLYLRCMKLAASRFKAVEKTEGWKFLQDH   79 (260)
Q Consensus         1 me~~v~~LL~AAd~yqI~~LK~~Ce~~L~~-~Ls~eN~l~il~lA~~~~a~~Lk~~c~~FI~~nf~~V~~te~f~~L~~~   79 (260)
                      |...+.+|+.+.+.|.|+.++..|..-+.. .++..|++.++.++..|+.+.|..++...|...|..+.+|++|..+...
T Consensus        94 ~~~~~ihll~~~~~~~v~~~~~d~~~~~~~~~~~~r~~flvl~~~~~~~~~~lr~a~hss~~~~~~~H~~t~~~~~~~c~  173 (319)
T KOG1778|consen   94 MVFFDIHLLALSHVYVVPQPKADCDPILECGLFDKRNVFLVLQLAEHCDFSDLRRAKHSSIMLLFDLHLQTEKWFAYTCP  173 (319)
T ss_pred             HHHHHHHHHhhhhhhhccCccccCCccccchhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHhcccCceeeecC
Confidence            456788999999999999999999999988 4899999999999999999999999999999999999999999999888


Q ss_pred             CchHHHHHHHhhHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHHHhhhCCccCCCCCCCCCCCCCCCCCCcccHHHHHHH
Q 024903           80 DPWLELQILQFMDEAESRIKRTRRRRQEQGLYLQLSEAMECLEHICTEGCTSVGPYEVGPTKNRGPCSKFATCQGLQLLI  159 (260)
Q Consensus        80 ~P~L~~eil~~v~~~d~~~~~~~r~r~e~~v~~ql~~am~~L~Ha~~~~C~~~~~~~~~~~~~~~~C~~~~~C~~lk~l~  159 (260)
                      .|.+..  ...+...........+...++..+.|+.++|.+    |++||.++||..+...+++++|. |++|.+||+|+
T Consensus       174 ~c~~~~--~~~~~c~~~~d~d~~~~~~~k~~h~h~~~~~~~----~~~~~~~~~~~~~~i~~~~~~C~-~~~C~~~k~li  246 (319)
T KOG1778|consen  174 ICKLEV--LTAWHCEVCPDYDRCRACEEKPLHPHLYEAMES----CTDGCATIGPRNKSINRRDANCS-YPSCNGLKRLI  246 (319)
T ss_pred             cccccc--ccccccccCCchhhhhcccCCCCCCcchhcccc----cccccccccchhhhhccCCCCCC-CchhHHHHHHH
Confidence            888776  344333333444445555666668999999999    99999999999999887789999 99999999999


Q ss_pred             HHHhhcCccCCCCCcchHHHHHHHHHHHhcCCCCCCCCCCcchhhHHHHhhhhcC-chhHHHHHHHHHHHhhhhh
Q 024903          160 RHFATCKKRVNGGCLRCKRMWQLLRLHSSMCEQSDSCRVPLCRQFKLKAQLEKKG-DDGRWRLLVKKVVSAKTIS  233 (260)
Q Consensus       160 ~H~~~C~~r~~ggC~~Ckr~~~Ll~lHa~~C~~~~~C~VP~C~~~k~~~~~~~~~-~~~~w~llv~~v~~~~~~~  233 (260)
                      +|+.+|+.|  |||++||+||+|++|||++|++++ |+||+|+++|+++++++++ ++.+|++++++|..++++.
T Consensus       247 rH~~~Ck~R--~gC~iCk~m~~L~~lha~~c~~~~-C~vP~c~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (319)
T KOG1778|consen  247 RHFRGCKLR--GGCPICKRLWQLLELHARHCDDSK-CKVPLCRNLKQKLEKQQKQADERRWKLLVRRVAGTKADG  318 (319)
T ss_pred             HHHHHHHhc--cCCchHHHHHHHHHHHHHHccccc-CCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHhhhccc
Confidence            999999999  999999999999999999999998 9999999999999998875 9999999999999988764

>smart00551 ZnF_TAZ TAZ zinc finger, present in p300 and CBP Back     alignment and domain information
>PHA02790 Kelch-like protein; Provisional Back     alignment and domain information
>PF02135 zf-TAZ: TAZ zinc finger; InterPro: IPR000197 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule Back     alignment and domain information
>PHA03098 kelch-like protein; Provisional Back     alignment and domain information
>PHA02713 hypothetical protein; Provisional Back     alignment and domain information
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only] Back     alignment and domain information
>KOG4350 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] Back     alignment and domain information
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown] Back     alignment and domain information
>PF07707 BACK: BTB And C-terminal Kelch; InterPro: IPR011705 This domain is found associated with (IPR000210 from INTERPRO) and (IPR006652 from INTERPRO) Back     alignment and domain information
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] Back     alignment and domain information
>KOG4682 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] Back     alignment and domain information
>smart00875 BACK BTB And C-terminal Kelch Back     alignment and domain information
>KOG2075 consensus Topoisomerase TOP1-interacting protein BTBD1 [Function unknown] Back     alignment and domain information
>KOG1987 consensus Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains [Cell cycle control, cell division, chromosome partitioning; General function prediction only] Back     alignment and domain information
>PF02135 zf-TAZ: TAZ zinc finger; InterPro: IPR000197 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule Back     alignment and domain information
>smart00551 ZnF_TAZ TAZ zinc finger, present in p300 and CBP Back     alignment and domain information
>PF01466 Skp1: Skp1 family, dimerisation domain; InterPro: IPR016072 SKP1 (together with SKP2) was identified as an essential component of the cyclin A-CDK2 S phase kinase complex [] Back     alignment and domain information
>KOG2075 consensus Topoisomerase TOP1-interacting protein BTBD1 [Function unknown] Back     alignment and domain information
>PF11822 DUF3342: Domain of unknown function (DUF3342); InterPro: IPR021777 This family of proteins are functionally uncharacterised Back     alignment and domain information
>PF00651 BTB: BTB/POZ domain; InterPro: IPR013069 The BTB (for BR-C, ttk and bab) [] or POZ (for Pox virus and Zinc finger) [] domain is present near the N terminus of a fraction of zinc finger (IPR007087 from INTERPRO) proteins and in proteins that contain the IPR006652 from INTERPRO motif such as Kelch and a family of pox virus proteins Back     alignment and domain information
>KOG0511 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query260
3t92_A121 Crystal Structure Of The Taz2:cEBPEPSILON-Tad Chime 9e-06
2k8f_A90 Structural Basis For The Regulation Of P53 Function 2e-05
3io2_A114 Crystal Structure Of The Taz2 Domain Of P300 Length 8e-05
1f81_A88 Solution Structure Of The Taz2 Domain Of The Transc 1e-04
2ka6_A92 Nmr Structure Of The Cbp-Taz2STAT1-Tad Complex Leng 1e-04
3p57_P112 Crystal Structure Of The P300 Taz2 Domain Bound To 5e-04
>pdb|3T92|A Chain A, Crystal Structure Of The Taz2:cEBPEPSILON-Tad Chimera Protein Length = 121 Back     alignment and structure 
Iteration: 1

 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 149 FATCQGLQLLIRHFATCKKRVNGGCLRCKRMWQLLRLHSSMCEQSDSCRVPLCRQFKLK- 207
             +CQ ++ +++H   CK++ NGGC  CK++  L   H+  C Q + C VP C   K K 
Sbjct: 33  LPSCQKMKRVVQHTKGCKRKTNGGCPICKQLIALAAYHAKHC-QENKCPVPFCLNIKQKL 91
Query: 208 --AQLEKKGD 215
              QLE   D
Sbjct: 92  RQQQLEASID 101
>pdb|2K8F|A Chain A, Structural Basis For The Regulation Of P53 Function By P300 Length = 90 Back     alignment and structure
>pdb|3IO2|A Chain A, Crystal Structure Of The Taz2 Domain Of P300 Length = 114 Back     alignment and structure
>pdb|1F81|A Chain A, Solution Structure Of The Taz2 Domain Of The Transcriptional Adaptor Protein Cbp Length = 88 Back     alignment and structure
>pdb|2KA6|A Chain A, Nmr Structure Of The Cbp-Taz2STAT1-Tad Complex Length = 92 Back     alignment and structure
>pdb|3P57|P Chain P, Crystal Structure Of The P300 Taz2 Domain Bound To Mef2 On Dna Length = 112 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query260
3p57_P112 Histone acetyltransferase P300; protein-DNA comple 1e-22
3t92_A121 Histone acetyltransferase P300 TAZ2-ccaat/enhance 1e-22
3hqi_A312 Speckle-type POZ protein; SPOP, ubiquitin, puckere 1e-11
3htm_A172 Speckle-type POZ protein; BTB, SPOP, ubiquitin, li 1e-11
4eoz_A145 Speckle-type POZ protein; E3 ubiquitin ligase, nuc 6e-05
3i3n_A279 Kelch-like protein 11; structural genomics, BTB, K 6e-04
3hve_A256 Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, dis 7e-04
>3p57_P Histone acetyltransferase P300; protein-DNA complex, transcription factor, transcriptional activation, zinc finger; HET: DNA; 2.19A {Homo sapiens} PDB: 2ka6_A 2kje_A 3io2_A 1f81_A 2k8f_A Length = 112 Back     alignment and structure
 Score = 88.9 bits (220), Expect = 1e-22
 Identities = 27/119 (22%), Positives = 56/119 (47%), Gaps = 16/119 (13%)

Query: 111 YLQLSEAMECLEHICTEGCTSVGPYEVGPTKNRGPCSKFATCQGLQLLIRHFATCKKRVN 170
            L +   ++ L H C   C +              CS   +CQ ++ +++H   CK++ N
Sbjct: 9   RLSIQRCIQSLVHACQ--CRN------------ANCS-LPSCQKMKRVVQHTKGCKRKTN 53

Query: 171 GGCLRCKRMWQLLRLHSSMCEQSDSCRVPLCRQFKLKAQLEKKGDDGRWRLLVKKVVSA 229
           GGC  CK++  L   H+  C+++  C VP C   K K + ++     +   ++++ +++
Sbjct: 54  GGCPICKQLIALCCYHAKHCQENK-CPVPFCLNIKQKLRQQQLQHRLQQAQMLRRRMAS 111
>3t92_A Histone acetyltransferase P300 TAZ2-ccaat/enhance protein epsilon; TAZ2 domain, zinc finger, transcription, 300/CBP, C/EBP PROT transferase; HET: TCE TAM; 1.50A {Homo sapiens} PDB: 2k8f_A 2ka6_A 2kje_A 1f81_A Length = 121 Back     alignment and structure
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A Length = 312 Back     alignment and structure
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens} Length = 172 Back     alignment and structure
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens} Length = 145 Back     alignment and structure
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} Length = 279 Back     alignment and structure
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B Length = 256 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query260
3t92_A121 Histone acetyltransferase P300 TAZ2-ccaat/enhance 99.98
3p57_P112 Histone acetyltransferase P300; protein-DNA comple 99.96
3hve_A256 Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, dis 99.5
3i3n_A279 Kelch-like protein 11; structural genomics, BTB, K 99.48
3htm_A172 Speckle-type POZ protein; BTB, SPOP, ubiquitin, li 99.36
3hqi_A312 Speckle-type POZ protein; SPOP, ubiquitin, puckere 99.3
2eqx_A105 Kelch repeat and BTB domain-containing protein 4; 99.2
1l3e_B101 P300 protein; protein-protein complex, transcripti 98.84
4eoz_A145 Speckle-type POZ protein; E3 ubiquitin ligase, nuc 98.63
2yy9_A135 Zinc finger and BTB domain-containing protein 48; 96.34
1l3e_B101 P300 protein; protein-protein complex, transcripti 96.22
2ast_A159 S-phase kinase-associated protein 1A; SCF-substrat 95.68
2p1m_A160 SKP1-like protein 1A; F-BOX, leucine rich repeat, 95.57
1fs1_B141 SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, le 94.58
2vkp_A109 BTB/POZ domain-containing protein 6; protein-bindi 94.44
1r29_A127 B-cell lymphoma 6 protein; BTB domain, transcripti 91.06
3t92_A121 Histone acetyltransferase P300 TAZ2-ccaat/enhance 91.03
2yy9_A135 Zinc finger and BTB domain-containing protein 48; 90.44
3b84_A119 Zinc finger and BTB domain-containing protein 48; 89.75
2q81_A119 MIZ-1 protein; BTB/POZ domain, transcription; HET: 89.15
2vpk_A116 Myoneurin; transcription regulation, transcription 88.69
1buo_A121 POZ domain, protein (promyelocytic leukemia zinc f 88.21
2if5_A120 Zinc finger and BTB domain-containing protein 7A; 87.65
3v7d_A169 Suppressor of kinetochore protein 1; WD 40 domain, 87.24
3htm_A172 Speckle-type POZ protein; BTB, SPOP, ubiquitin, li 85.53
4eoz_A145 Speckle-type POZ protein; E3 ubiquitin ligase, nuc 83.4
2ppi_A144 Gigaxonin; BTB domain, protein degradation, struct 83.38
3p57_P112 Histone acetyltransferase P300; protein-DNA comple 82.5
3ga1_A129 Nucleus accumbens-associated protein 1; BTB/POZ do 80.85
>3t92_A Histone acetyltransferase P300 TAZ2-ccaat/enhance protein epsilon; TAZ2 domain, zinc finger, transcription, 300/CBP, C/EBP PROT transferase; HET: TCE TAM; 1.50A {Homo sapiens} PDB: 2k8f_A 2ka6_A 2kje_A 1f81_A Back     alignment and structure
Probab=99.98  E-value=9.3e-33  Score=223.70  Aligned_cols=104  Identities=28%  Similarity=0.643  Sum_probs=95.3

Q ss_pred             HHHHHHHHHHHHHHhhhCCccCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhcCccCCCCCcchHHHHHHHHHHHhcC
Q 024903          111 YLQLSEAMECLEHICTEGCTSVGPYEVGPTKNRGPCSKFATCQGLQLLIRHFATCKKRVNGGCLRCKRMWQLLRLHSSMC  190 (260)
Q Consensus       111 ~~ql~~am~~L~Ha~~~~C~~~~~~~~~~~~~~~~C~~~~~C~~lk~l~~H~~~C~~r~~ggC~~Ckr~~~Ll~lHa~~C  190 (260)
                      ..+|+++|++|+||++  |+            +++|. +|+|.+||.|++|+.+|+.+.+|||++|+++|+||.+|+++|
T Consensus        10 ~~~iq~~l~~L~HA~~--C~------------~~~C~-~p~C~~mK~ll~H~~~C~~r~~~~c~~C~~~~~Ll~~Hak~C   74 (121)
T 3t92_A           10 RLSIQRAIQSLVHAAQ--CR------------NANCS-LPSCQKMKRVVQHTKGCKRKTNGGCPICKQLIALAAYHAKHC   74 (121)
T ss_dssp             HHHHHHHHHHHHHHHH--CC------------CTTCC-CHHHHHHHHHHHHHHHCSSTTTTTCHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHcc--Cc------------CCCCC-CchhHHHHHHHHHHHHccCCCCCCCCchHHHHHHHHHHHHhC
Confidence            4679999999999999  98            67899 999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcchhhHHHHhhhh--------cCchhHHHHHHHHHHHhh
Q 024903          191 EQSDSCRVPLCRQFKLKAQLEK--------KGDDGRWRLLVKKVVSAK  230 (260)
Q Consensus       191 ~~~~~C~VP~C~~~k~~~~~~~--------~~~~~~w~llv~~v~~~~  230 (260)
                      ++++ |+||+|++||++|++++        .++|++|++||+||++||
T Consensus        75 ~~~~-C~VP~C~~iK~~~~~qq~q~~~~~~~~~~~~~~~l~~~~~~~~  121 (121)
T 3t92_A           75 QENK-CPVPFCLNIKQKLRQQQLEASIDLSAYIESGEEQLLSDLFAVK  121 (121)
T ss_dssp             CCTT-CCSTTHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHTC--
T ss_pred             CCCC-CCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            9986 99999999999999874        358999999999999886
>3p57_P Histone acetyltransferase P300; protein-DNA complex, transcription factor, transcriptional activation, zinc finger; HET: DNA; 2.19A {Homo sapiens} PDB: 3io2_A Back     alignment and structure
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B Back     alignment and structure
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A Back     alignment and structure
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens} Back     alignment and structure
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A Back     alignment and structure
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>1l3e_B P300 protein; protein-protein complex, transcription; NMR {Homo sapiens} SCOP: g.53.1.1 PDB: 1p4q_B 1r8u_B 2ka4_A 1l8c_A 1u2n_A 1liq_A Back     alignment and structure
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens} Back     alignment and structure
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus} Back     alignment and structure
>1l3e_B P300 protein; protein-protein complex, transcription; NMR {Homo sapiens} SCOP: g.53.1.1 PDB: 1p4q_B 1r8u_B 2ka4_A 1l8c_A 1u2n_A 1liq_A Back     alignment and structure
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A* Back     alignment and structure
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D Back     alignment and structure
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens} Back     alignment and structure
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A Back     alignment and structure
>3t92_A Histone acetyltransferase P300 TAZ2-ccaat/enhance protein epsilon; TAZ2 domain, zinc finger, transcription, 300/CBP, C/EBP PROT transferase; HET: TCE TAM; 1.50A {Homo sapiens} PDB: 2k8f_A 2ka6_A 2kje_A 1f81_A Back     alignment and structure
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus} Back     alignment and structure
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens} Back     alignment and structure
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A Back     alignment and structure
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens} Back     alignment and structure
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A Back     alignment and structure
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A Back     alignment and structure
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A* Back     alignment and structure
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens} Back     alignment and structure
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens} Back     alignment and structure
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} Back     alignment and structure
>3p57_P Histone acetyltransferase P300; protein-DNA complex, transcription factor, transcriptional activation, zinc finger; HET: DNA; 2.19A {Homo sapiens} PDB: 3io2_A Back     alignment and structure
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 260
d1f81a_87 g.53.1.1 (A:) CREB-binding transcriptional adaptor 4e-18
d1l8ca_95 g.53.1.1 (A:) CREB-binding transcriptional adaptor 2e-08
>d1f81a_ g.53.1.1 (A:) CREB-binding transcriptional adaptor protein CBP (p300) {Mouse (Mus musculus) [TaxId: 10090]} Length = 87 Back     information, alignment and structure

class: Small proteins
fold: TAZ domain
superfamily: TAZ domain
family: TAZ domain
domain: CREB-binding transcriptional adaptor protein CBP (p300)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 74.9 bits (184), Expect = 4e-18
 Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 16/97 (16%)

Query: 111 YLQLSEAMECLEHICTEGCTSVGPYEVGPTKNRGPCSKFATCQGLQLLIRHFATCKKRVN 170
            L +   ++ L H C               + R       +CQ ++ +++H   CK++ N
Sbjct: 7   RLSIQRCIQSLVHAC---------------QCRNANCSLPSCQKMKRVVQHTKGCKRKTN 51

Query: 171 GGCLRCKRMWQLLRLHSSMCEQSDSCRVPLCRQFKLK 207
           GGC  CK++  L   H+  C+++  C VP C   K K
Sbjct: 52  GGCPVCKQLIALCCYHAKHCQENK-CPVPFCLNIKHK 87
>d1l8ca_ g.53.1.1 (A:) CREB-binding transcriptional adaptor protein CBP (p300) {Mouse (Mus musculus) [TaxId: 10090]} Length = 95 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query260
d1f81a_87 CREB-binding transcriptional adaptor protein CBP ( 99.93
d1l8ca_95 CREB-binding transcriptional adaptor protein CBP ( 99.81
d1l8ca_95 CREB-binding transcriptional adaptor protein CBP ( 95.39
d1fs1b155 Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sa 92.38
d1nexa170 Centromere DNA-binding protein complex Cbf3 subuni 90.58
d1r29a_122 B-cell lymphoma 6 (Bcl6) protein BTB domain {Human 90.07
d1f81a_87 CREB-binding transcriptional adaptor protein CBP ( 90.05
d1buoa_121 Promyelocytic leukaemia zinc finger (PLZF) protein 86.32
>d1f81a_ g.53.1.1 (A:) CREB-binding transcriptional adaptor protein CBP (p300) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: Small proteins
fold: TAZ domain
superfamily: TAZ domain
family: TAZ domain
domain: CREB-binding transcriptional adaptor protein CBP (p300)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=7.9e-27  Score=177.04  Aligned_cols=81  Identities=33%  Similarity=0.843  Sum_probs=76.8

Q ss_pred             HHHHHHHHHHHHHHhhhCCccCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhcCccCCCCCcchHHHHHHHHHHHhcC
Q 024903          111 YLQLSEAMECLEHICTEGCTSVGPYEVGPTKNRGPCSKFATCQGLQLLIRHFATCKKRVNGGCLRCKRMWQLLRLHSSMC  190 (260)
Q Consensus       111 ~~ql~~am~~L~Ha~~~~C~~~~~~~~~~~~~~~~C~~~~~C~~lk~l~~H~~~C~~r~~ggC~~Ckr~~~Ll~lHa~~C  190 (260)
                      ..+|++.|++|+||++  |+            +++|+ +++|.+||.|++|+++|+.+.+|||++|+++|+||.+|++.|
T Consensus         7 ~~~iq~~l~~L~HA~~--C~------------~~~C~-~~~C~~mK~l~~H~~~C~~~~~~~c~~C~~~~~Ll~~H~k~C   71 (87)
T d1f81a_           7 RLSIQRCIQSLVHACQ--CR------------NANCS-LPSCQKMKRVVQHTKGCKRKTNGGCPVCKQLIALCCYHAKHC   71 (87)
T ss_dssp             HHHHHHHHHHHHHHHH--CC------------CTTCC-CHHHHHHHHHHHHHHHCTTHHHHTCHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHhHcc--CC------------CCCCC-CcHHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHHHHHHHc
Confidence            4679999999999999  97            67899 999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcchhhHHH
Q 024903          191 EQSDSCRVPLCRQFKLK  207 (260)
Q Consensus       191 ~~~~~C~VP~C~~~k~~  207 (260)
                      ++.+ |+||+|++||+|
T Consensus        72 ~~~~-CpVP~C~~~K~k   87 (87)
T d1f81a_          72 QENK-CPVPFCLNIKHK   87 (87)
T ss_dssp             CCSS-CSSTTHHHHHHC
T ss_pred             CCCC-CCCCcchhhccC
Confidence            9986 999999999985
>d1l8ca_ g.53.1.1 (A:) CREB-binding transcriptional adaptor protein CBP (p300) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1l8ca_ g.53.1.1 (A:) CREB-binding transcriptional adaptor protein CBP (p300) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1fs1b1 a.157.1.1 (B:86-140) Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nexa1 a.157.1.1 (A:116-185) Centromere DNA-binding protein complex Cbf3 subunit D, CBF3D {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1r29a_ d.42.1.1 (A:) B-cell lymphoma 6 (Bcl6) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1f81a_ g.53.1.1 (A:) CREB-binding transcriptional adaptor protein CBP (p300) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1buoa_ d.42.1.1 (A:) Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure