Citrus Sinensis ID: 024906

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260
MAAKPSTTTTAKATYSPIDPTRKTRPPIFSGSDVDWLRPDSRGFHQCRPAFFRTGAVNSASGSAYAEFGNTKVIVSVFGPRESKKAMMYSNIGRLNCNVSYTTFATPVRGQGSDHKDFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASVALADAGIMMYDLVASVSVSCLGKNLLIDPVLEEESYQDGSLMIACMPSRYEVTQLTVTGEWSTPHFNEAMQLCLDASAKLGKIMRSCLKEAASDEQE
cccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccCEEEEEEccEEEEEEEEccccccccccccccCEEEEEEEECccccccccccccHHHHHHHHHHHHHHHHccccccccEEEEEEEEEEcccccHHHHHHHHHHHHHHccccccccEEEEEEEEEccEEEEcccccHHccccccEEEEEEcccccEEEEEEECcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
********************************DVDWLRPDSRGFHQCRPAFFRTGAVNSASGSAYAEFGNTKVIVSVFGPRESKKAMMYSNIGRLNCNVSYTTFATPVRGQ*****DFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASVALADAGIMMYDLVASVSVSCLGKNLLIDPVLEEESYQDGSLMIACMPSRYEVTQLTVTGEWSTPHFNEAMQLCLDASAKLGKIMRSC**********
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MAAKPSTTTTAKATYSPIDPTRKTRPPIFSGSDVDWLRPDSRGFHQCRPAFFRTGAVNSASGSAYAEFGNTKVIVSVFGPRESKKAMMYSNIGRLNCNVSYTTFATPVRGQGSDHKDFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASVALADAGIMMYDLVASVSVSCLGKNLLIDPVLEEESYQDGSLMIACMPSRYEVTQLTVTGEWSTPHFNEAMQLCLDASAKLGKIMRSCLKEAASDEQE

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Probable exosome complex exonuclease 1 Probably involved in the 3'->5' degradation of a variety of RNA species.probableO26779
Probable exosome complex exonuclease 1 Probably involved in the 3'->5' degradation of a variety of RNA species.probableQ97BZ5
Probable exosome complex exonuclease 1 Probably involved in the 3'->5' degradation of a variety of RNA species.probableQ8U0L9

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2NN6, chain F
Confidence level:very confident
Coverage over the Query: 40-259
View the alignment between query and template
View the model in PyMOL